BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780949|ref|YP_003065362.1| tyrosyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (418 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|319784079|ref|YP_004143555.1| tyrosyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169967|gb|ADV13505.1| tyrosyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 417

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 237/415 (57%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQ S+   LD + ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQTSDDAGLDNIFAKETVTAYIGFDATAKSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGTS+IGDPSF+DE+R+++  Q+I++N+  I+  F  ++K+G+G 
Sbjct: 61  HWLQQTGHRPIALMGGGTSMIGDPSFKDEARKLLTPQDIEDNLAGIRRNFMPYLKFGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  I Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMEINYVNFLRDVGRHFSVNRMLAFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   CRLQMGGSDQWGNII GIDLG R++  +L+ALT+PLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRLGCRLQMGGSDQWGNIINGIDLGRRMEDAQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+ EM SPY FWQYWRN +DADV  F K  TTLP+ E+ R+ +L G EINEAKK
Sbjct: 241 ASGAVWLDAEMLSPYEFWQYWRNTEDADVARFLKLYTTLPLDEVARLERLGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT ++HGR  AE+A+  A + F+    ++ +PT+ + K  +  G+G+L+L+V AG
Sbjct: 301 ILATEITALLHGRAAAEQASDTARKTFEEGALAESLPTVEVDKTALETGVGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  +S+E+  +  QD      +KLS GKK HI+  
Sbjct: 361 LAASNGEARRHVQGGAVRLNDEPVSDERRLVTPQDLSPENVVKLSLGKKKHILVR 415


>gi|49474204|ref|YP_032246.1| tyrosyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81647075|sp|Q6FZW4|SYY_BARQU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49239708|emb|CAF26084.1| Tyrosyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 417

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 249/415 (60%), Positives = 320/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+ VV+AYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MLAFKSDFLHIMSERGFIHQISDEKGLDALFSKEVVSAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI+LMGGGT +IGDPSF+DE+R ++   +I  NI  IK +F++++ +G  +
Sbjct: 61  HWLQKTGHRPIALMGGGTGLIGDPSFKDEARPLLTQDDIATNIVSIKKVFANYLTFGEKE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G  FS+NRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIINNAEWLCKLNYLEFLRDVGKHFSINRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+A TSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYAFTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  TTLPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMDEILKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR+ A  AA  A + F+     +++PTI I+  ++  G GLL L+V+AG
Sbjct: 301 ILATEITAMLHGRDLANTAAKTARKTFEEKTFGENLPTIEINASDLKTGAGLLALLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   I++N+ II +E   I  +D ++ G IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRHIQGGGIRVNDQIIEDETCLILEEDINAQGIIKLSFGKKKHVLIK 415


>gi|241204833|ref|YP_002975929.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858723|gb|ACS56390.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 418

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 245/415 (59%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKETVTAYIGFDPTAPSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+ ISLMGGGT ++GDPSF++E+R++M    I+ NI  IK +FS+++ YG G 
Sbjct: 61  HWMQKTGHRAISLMGGGTGMVGDPSFKEEARQLMTVDTIEGNIASIKRVFSNYLNYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNAEWLRSLNYLEFLRDVGKHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLPM E+ R++ L G EINE KK
Sbjct: 241 ATGAIWLNADMLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEVARLSALGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+LIV+AG
Sbjct: 301 ILATEVTAILHGRPAAEQAAETARKTFEEGSLSENLPSVDIPATELDGGIGLLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A++IN+  +++E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAASNGEARRHVQGGAVRINDEAVNDERKMIGSGEITADGVIKLSLGKKKHILIR 415


>gi|260460867|ref|ZP_05809117.1| tyrosyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259033444|gb|EEW34705.1| tyrosyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 417

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 234/415 (56%), Positives = 313/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQ S+   LD L +   VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQTSDDAGLDNLFATETVTAYIGFDATAKSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGTS+IGDPSF+DE+R+++  Q+I +N+  I+  F  ++K+G+G 
Sbjct: 61  HWLQQTGHRPIALMGGGTSMIGDPSFKDEARKLLTPQDIDDNLVGIRRNFVPYLKFGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  I Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMEINYVNFLRDVGRHFSVNRMLAFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   CRLQMGGSDQWGNII GIDLG R++  +L+ALT+PLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRLGCRLQMGGSDQWGNIINGIDLGRRMEDAQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+  M SPY FWQYWRN +DADV  F K  TTLP+ E+ R+ +L G EIN+AKK
Sbjct: 241 ASGAVWLDASMLSPYEFWQYWRNTEDADVGRFLKLYTTLPLDEVARLGQLGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATEIT ++HGR  AE+A+  A + F+    ++ +PT+ +   ++  G+G+L+L+V AG
Sbjct: 301 VLATEITALLHGRAAAEQASDTARKTFEEGALAESLPTVEVENAKLEAGIGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  +S+E+  + LQD      +KLS G+K HI+  
Sbjct: 361 LAASNGEARRHVQGGAVRLNDQPVSDERRLVTLQDLSPENVVKLSLGRKKHILVR 415


>gi|288959225|ref|YP_003449566.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911533|dbj|BAI73022.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 428

 Score =  407 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 211/418 (50%), Positives = 285/418 (68%), Gaps = 5/418 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+FL  L ERGFIHQ ++   LD    +G + AYIG+D TA SLH G L  +M+L WLQK
Sbjct: 11  SEFLRTLQERGFIHQCTDLATLDERARKGPIVAYIGFDCTAESLHVGSLLPIMMLRWLQK 70

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-----GK 120
           TGHKPI LMGGGT+ IGDPS +DE+R+++  + I  N+  IK IF  ++ +       G 
Sbjct: 71  TGHKPIVLMGGGTTKIGDPSGKDEARQLLTDEVIAGNMAGIKRIFGRYLTFAPEGTTGGP 130

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  +KYI LLR+IG  F++NRM++F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 131 TDAVMVNNADWLDELKYIPLLRDIGRHFTINRMMTFDSVKLRLEREQPLTFLEFNYMILQ 190

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL + + C LQMGGSDQWGNI+ G++LG R    +LF LT+PLLTT+SG KMGKT
Sbjct: 191 AYDFVELKRRHGCSLQMGGSDQWGNIVNGVELGRRTDGAELFGLTTPLLTTSSGAKMGKT 250

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GAIWL  +    Y FWQYWRN +DADV  F +  T LP+ E+ R+  LQG EINEAKK
Sbjct: 251 AAGAIWLTADKLGSYEFWQYWRNTEDADVGRFLRLYTELPLDEVARLESLQGAEINEAKK 310

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG E A +AA  A   F+    +  +P+I +++ ++  G+ ++ L+V AG
Sbjct: 311 ILANEVTRLAHGEEAALEAAETARRAFEEGAAADGLPSIEVARADLEAGLPVVDLLVSAG 370

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            A S  EARR +K    K+N+  I++E  +    D ++ G +KLS GKK H +  + G
Sbjct: 371 LAASKGEARRLIKGGGAKLNDGPIADETAKATAADLNADGVVKLSAGKKRHALVKVGG 428


>gi|319404228|emb|CBI77821.1| Tyrosyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 417

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 249/415 (60%), Positives = 320/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MYAFKSEFLRIISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I +NI  IK IF+S++ +G  K
Sbjct: 61  HWFQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDIAQNIMSIKKIFTSYLTFGDNK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR +G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLSYLEFLRNVGKYFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLPM+EI +++ L+G EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLPMTEIAKLSALKGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITAMLHGRTLANEALETARKTFEEKTFGENLPSIKINATELKVGIGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARR+++   I++N+ II NE   I  +D ++   IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRYVQGGGIRVNDQIIENETHLIVEKDVNADEVIKLSFGKKKHVLVK 415


>gi|118590058|ref|ZP_01547462.1| tyrosyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437555|gb|EAV44192.1| tyrosyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 417

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 230/415 (55%), Positives = 302/415 (72%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++LSERGFIHQIS+P+ LD LC++  VTAYIG+D TA SLHAG L  +M+L
Sbjct: 1   MSEFKSDFLNVLSERGFIHQISDPKGLDALCAKETVTAYIGFDCTAPSLHAGSLVPIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI+LMGGGT+ +GDPS +DESR+++    I+EN   I+ +F   + +G G 
Sbjct: 61  HWFQKTGHRPIALMGGGTTRVGDPSGKDESRKILTEDVIEENKAGIRKVFEKLLTFGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + Y+D LR+IG  FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ
Sbjct: 121 TDAIMLDNADWLLKLNYVDFLRDIGRHFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++EL +   CRLQMGGSDQWGNI+ G DL  RL   + FALTSPLLTT+SG KMGKT
Sbjct: 181 GYDYLELYRRTGCRLQMGGSDQWGNILSGTDLVRRLADVEAFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E  S Y++WQYWRN +DADV  F K  T LPM EI R+A L+G EINEAKK
Sbjct: 241 AAGAVWLNEEQLSAYDYWQYWRNTEDADVERFMKLFTVLPMDEIARLAALRGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T ++HGRE AE AA  A + F+    ++ +PT+ I+K ++  G+G+L+  V AG
Sbjct: 301 ILATEATALIHGRENAEAAAETARKAFEEGQSAEGLPTVEIAKADLEAGLGVLSAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  + RR++K  A+KIN+    ++K QI L D  + G +KLS GKK H++  
Sbjct: 361 LCASNGDVRRNIKGGAVKINDKGEQDDKRQITLADVTADGIVKLSLGKKKHVLLK 415


>gi|153009590|ref|YP_001370805.1| tyrosyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561478|gb|ABS14976.1| tyrosyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 417

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 318/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I ENI  IK +F++++ +G   
Sbjct: 61  HWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENIAGIKRVFANYLTFGDSA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 TDALMVNNADWLRNINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL+K YD RLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELSKRYDLRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN EM S Y+FWQYWRN +DADV  F K  TTLP+ EI ++A L+G EINEAKK
Sbjct: 241 LGGAIWLNAEMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIAKLAALEGVEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ A+++A  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAADESAETARKTFEDGELSENLPTVGVHKATLNSGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMTVDAGALNDQGVIKLSLGKKRHVLIR 415


>gi|13470335|ref|NP_101900.1| tyrosyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|75544372|sp|Q98NS5|SYY_RHILO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14021073|dbj|BAB47686.1| tyrosyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 417

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 236/415 (56%), Positives = 309/415 (74%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQIS+   LD L ++  VTAY+GYD TA+SLH G+L    +L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQISDETGLDQLFAKETVTAYVGYDATATSLHIGNLISATML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS+IGDPSFRD+ R ++  + I  NIE IK IF   +++G G 
Sbjct: 61  YWLQETGHRPIALMGGGTSMIGDPSFRDDQRSLLTPEAIATNIEGIKRIFGRILRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  + Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMKLNYVEFLRDVGRHFSVNRMLTFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVELA+  +CRLQMGGSDQWGNII G+DLG R+ TP+L+ALT+PLLTT+SG KMGK+
Sbjct: 181 GYDFVELARRQNCRLQMGGSDQWGNIINGVDLGHRMGTPQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN ++ SPY+FWQYWRN +DADV  F K  T LP+ EI R+A L G EINEAKK
Sbjct: 241 AKGAVWLNGDLFSPYDFWQYWRNTEDADVERFLKIFTRLPLPEIARLAALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGRE A +A   A + F+    +  +PT+   K  +  G+G+L+L+V AG
Sbjct: 301 ILATETTAIVHGREAANQAEETARKTFEEGALADTLPTVGADKAALEAGIGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH++  A++IN+  +S+++  + LQD      +KLS GKK H++  
Sbjct: 361 LASSNGEARRHIQGGAVRINDQSVSDDRRMVTLQDLSPENVVKLSLGKKKHVLVR 415


>gi|209549500|ref|YP_002281417.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535256|gb|ACI55191.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 418

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+ R LD + ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDERGLDDMFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARQLMTIDTIEQNIASIKNCFSNYLDYDKSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KK
Sbjct: 241 ASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+TT++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEVTTILHGRPAAEQAAETARKTFEEGGLSENLPSVDIPATELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAGSNGEARRHVQGGAVRVNDEAVSDERRLIGSSEITADGVIKLSLGKKKHILIR 415


>gi|110634136|ref|YP_674344.1| tyrosyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110285120|gb|ABG63179.1| tyrosyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 417

 Score =  406 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 313/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP FKSDFL ILSERGFIHQIS+   LD L  +  VT YIGYD TA+SLH GHLTQ+M+L
Sbjct: 1   MPDFKSDFLRILSERGFIHQISDEAGLDELFLRETVTGYIGYDPTAASLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGT +IGDPSF+DE+R+++  + I +N+  +K  FS ++K+G G 
Sbjct: 61  HWLQQTGHRPIALMGGGTGMIGDPSFKDEARKLLTPEAIGQNLAGMKKSFSRYLKFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M NN  WL  + Y+  LR++G  FSVNRMLSFESV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMANNADWLLDLNYVTFLRDVGRHFSVNRMLSFESVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL + Y CRLQMGGSDQWGNI+ GIDLG R++   LFALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELQRRYGCRLQMGGSDQWGNIVNGIDLGRRMEDTTLFALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+  M SPY+FWQYWRN +DADV  F K  TTLP+ EIDR+ KL G EINEAKK
Sbjct: 241 ESGAVWLDPAMLSPYDFWQYWRNTEDADVGRFLKLYTTLPLDEIDRLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  AE+AA  A + F+    ++ +PTI + + ++  G+G+L  +V AG
Sbjct: 301 ILATEVTAMLHGRAAAEEAAETARKTFEEGALAESLPTIEVPRAQMEAGIGVLNAVVLAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A +  E RR + +NAI++N+  I++++  I   D  + G +KLSFG+K H++  
Sbjct: 361 LAATNGEVRRAIANNAIRVNDETITDDRATIGAGDITAEGVVKLSFGRKKHVLLR 415


>gi|86357873|ref|YP_469765.1| tyrosyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281975|gb|ABC91038.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 418

 Score =  406 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 241/415 (58%), Positives = 313/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++ VVTAY+GYD TA+SLH G+L    +L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKEVVTAYVGYDATATSLHIGNLISATML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRDE R+++  + I  NIE IK IFS  +++G G 
Sbjct: 61  YWLQETGHRPIALMGGGTSMVGDPSFRDEQRKLLTPEAIATNIEGIKKIFSRILRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA M+NN  WL  + Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDAFMVNNADWLMKLNYVEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL++ Y CRLQMGGSDQWGNII G+DLG R+ TP+L+ALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFVELSRRYGCRLQMGGSDQWGNIINGVDLGHRMGTPQLYALTTPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN+++ SPY+FWQYWRN +DADV  F K  T LP+SEI R+  L G EINEAKK
Sbjct: 241 ASGAVWLNEDVFSPYDFWQYWRNTEDADVGRFLKIFTRLPLSEIARLEALGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGR  AE +A  A   F+    ++++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEATAIVHGRVAAEASAETARTTFEEGRIAENLPSVEIPATELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  IS+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAGSNGEARRHVQGGAVRVNDEAISDERRLIGSGEITADGVIKLSLGKKKHILIR 415


>gi|27379441|ref|NP_770970.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81737266|sp|Q89M63|SYY_BRAJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27352592|dbj|BAC49595.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 417

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 229/415 (55%), Positives = 304/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTAFKSDFLNILQERGFIHQCSDFEGLDALAAKGEATAYVGYDCTARSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ++G+KPI+LMGGGT+++GDPS +DE+R M    EI+ N E I+G+F+  ++YG GK
Sbjct: 61  HWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKESIRGVFAKVLRYGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+ML+N  WL  + +I++LR++G  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 SDAVMLDNAEWLTKLNWIEMLRDVGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK   C+LQMGGSDQWGNII G+DLG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELAKRTGCKLQMGGSDQWGNIIMGVDLGRRMGTHQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN +DADV  F K  TTLPMSEI ++  L G EINEAKK
Sbjct: 241 AQGAVWLNADQFSPYDFWQYWRNTEDADVGKFLKLFTTLPMSEIGKLEALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGR+ A +AA  A   F+    ++ +PT+ I + E+  G G+L   VKAG
Sbjct: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAESLPTVEIPRGELDAGFGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  ++++K+ +        G IKLSFGKK HI+  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDEPVTDDKMALSAAHLTPEGVIKLSFGKKKHILIK 415


>gi|240850610|ref|YP_002972010.1| tyrosyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267733|gb|ACS51321.1| tyrosyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 417

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 248/415 (59%), Positives = 322/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+  ++AY G+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSDFLHIMSERGFIHQISDEKGLDDLFSKETISAYTGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI+LMGGGT +IGDPSF+DE+RR++   +I  NI+ IK +F++++ +G  +
Sbjct: 61  YWLQKTGHRPIALMGGGTGLIGDPSFKDEARRLLTQDDIAANIDGIKKVFANYLTFGDQE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLNYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRNI+DADV  F K  T LPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNIEDADVTRFLKLYTPLPMDEILKLSVLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A  AA  A + F+     +++PT+  +  E+ +G+GLLTL+V+AG
Sbjct: 301 ILATEVTAMLHGRALANAAAETARKTFEEKTLGENLPTVETNASELKKGVGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   +++N+ II +E   I   D  + G IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRHVQGGGVRVNDQIIEDETHLIIEGDVSAEGIIKLSFGKKKHVVIK 415


>gi|49475630|ref|YP_033671.1| tyrosyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81647882|sp|Q6G3B6|SYY_BARHE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49238437|emb|CAF27665.1| Tyrosyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 417

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 247/415 (59%), Positives = 322/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+I+SERGFIHQIS+ + LD L S+ VV+AYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MLAFKSDFLNIMSERGFIHQISDEKGLDALFSKEVVSAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I  NI  IK +F+ ++ +G  +
Sbjct: 61  YWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTQDDIAANIADIKKVFARYLTFGERE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TD+ ++NN  WLC++ Y++ LR+IG  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDSCIVNNAEWLCTLNYLEFLRDIGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  T LPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTPLPMDEILKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR+ A   A  A + F+     +++PT  I+ +++  G GLL L+V+AG
Sbjct: 301 ILATEITAMLHGRDLANAVAETARKTFEERTLGENLPTFEINANDLKMGTGLLILLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            + S +EARRH++   +++N+ II +E   I+ +D ++ G IKLSFGKK H++  
Sbjct: 361 LSKSNSEARRHIQGGGVRVNDHIIEDETHLIREEDINAQGIIKLSFGKKKHVLIK 415


>gi|116252334|ref|YP_768172.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256982|emb|CAK08076.1| putative tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 418

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 249/415 (60%), Positives = 319/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKETVTAYIGFDPTAPSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+ ISLMGGGT ++GDPSF++E+R++M    I+ NI  IK +FS+++ YG G 
Sbjct: 61  HWMQKTGHRAISLMGGGTGMVGDPSFKEEARQLMTVDTIEGNIASIKRVFSNYLNYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNAEWLRSLNYLEFLRDVGKHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y+FWQYWRN +DADV  F K  TTLPM EI R+A L G EINE KK
Sbjct: 241 ATGAVWLNADMLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIARLAALGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGRE AE+AA  A + F+    S+++P++ I   E+  G+GLL+LIV+AG
Sbjct: 301 ILATEVTAILHGREAAEQAAETARKTFEEGSLSENLPSVDIPATELDGGIGLLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LASSNGEARRHVQGGAVRINDEAVSDERKMIGSGEITADGVIKLSLGKKKHILIR 415


>gi|328543676|ref|YP_004303785.1| Tyrosyl-tRNA synthetase protein [polymorphum gilvum SL003B-26A1]
 gi|326413420|gb|ADZ70483.1| Tyrosyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
          Length = 418

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 298/415 (71%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL  L +RGFIHQIS+P+ LD LC+   VTAYIG+D TA SLH G L Q+M+L
Sbjct: 1   MTEFKSEFLKTLGDRGFIHQISDPKGLDKLCASETVTAYIGFDCTAPSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGT+ +GDPS +DESR+++  + I+ N   I+ +F   + +G G 
Sbjct: 61  YWLQQTGHRPIALMGGGTTRVGDPSGKDESRQLLTPETIEANKAGIRKVFERLLVFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM++N  WL  + Y+D LRE+G  FSVN+M+  +SVR RL+RE  LSFLEFNYM+LQ
Sbjct: 121 TDALMMDNADWLLKLNYVDFLREVGRHFSVNQMIQRDSVRLRLEREHHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++E+ +   CRLQMGGSDQWGNI+ G+DL  R++  + FALTSPLLTTASG KMGKT
Sbjct: 181 GYDYLEIYRRTGCRLQMGGSDQWGNILSGVDLTRRMEGTETFALTSPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN++  S Y++WQYWRN +DADV  F K  TTLP+ EI R+A L+G EINEAKK
Sbjct: 241 AAGAVWLNEDQLSSYDYWQYWRNTEDADVERFLKLFTTLPLDEIARLAALEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +ATE T +VHGR  AE AA  A + F+       +PT+ +   ++  G+G+L   V AG
Sbjct: 301 TLATEATALVHGRAAAEAAAETARKAFEEGETDAGLPTVDLPAAQLDAGLGILNAFVAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  E RR++K  A+++N+++++++ LQ+   D  + G IKLS GKK H++  
Sbjct: 361 LCASNGEVRRNIKGGAVRVNDAVVADDTLQLTGADVTAQGVIKLSLGKKKHVLLR 415


>gi|254693653|ref|ZP_05155481.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213920|ref|ZP_05928201.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915527|gb|EEX82388.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 417

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 242/415 (58%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+ A  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEETAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|90417698|ref|ZP_01225610.1| tyrosyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337370|gb|EAS51021.1| tyrosyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 417

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 230/415 (55%), Positives = 302/415 (72%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL+ L+ERGFIHQ S+   LD L     VT YIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTRFKSEFLATLAERGFIHQTSDDNGLDDLFRSETVTGYIGFDPTAASLHVGSLMQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+Q+TGH+PI+LMGGGT +IGDPSF+DE+R++     I  N+  IK  F  +I++G G 
Sbjct: 61  HWMQQTGHRPIALMGGGTGMIGDPSFKDEARKLQTEDTIASNLAGIKRSFQPYIRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  + Y+  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNAEWLLELNYVAFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   C+LQMGGSDQWGNI+ GIDLG R++   L+ALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELYKRTGCKLQMGGSDQWGNIVNGIDLGRRMEGADLYALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGAIWLN +M S Y+FWQYWRN +DADV  F K  TTLPM EI R+  L G EIN+AKK
Sbjct: 241 ASGAIWLNDDMLSAYDFWQYWRNTEDADVGRFLKLYTTLPMDEIARLEALGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T M+HGR  AE +A  A + F+    +  +PTI +    ++ G+GLL+L+V AG
Sbjct: 301 VLANEVTAMLHGRAAAEASAETARKTFEEGALADSLPTIEVPAASLAEGVGLLSLLVSAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH+K  A+++N++ +++E+L +   D    G +KLS G+K H++  
Sbjct: 361 LASSNGEARRHIKGGAVRVNDAQVTDERLMVGT-DALVQGVVKLSVGRKKHVLVR 414


>gi|307941925|ref|ZP_07657278.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307774831|gb|EFO34039.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 417

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 224/415 (53%), Positives = 297/415 (71%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+++ +LSERG+IHQ+S+P+ LD LC++  VTAYIG+D TA SLH G L Q+M+L
Sbjct: 1   MSEFKSEYMQVLSERGYIHQVSDPKGLDELCAKESVTAYIGFDCTAPSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI+LMGGGT+ +GDPS +DESR+++   +I+ N   IK +F   + +G G 
Sbjct: 61  HWFQKTGHRPIALMGGGTTRVGDPSGKDESRKILTPDDIEANKAGIKQVFEKLLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL S+ Y+D LREIG  FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ
Sbjct: 121 QDAVMVDNADWLLSLNYVDFLREIGRHFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++EL +   CRLQMGGSDQWGNI+ G DL  RL+  + FALTSPLLTTASG KMGKT
Sbjct: 181 GYDYLELYRRTGCRLQMGGSDQWGNILSGTDLVRRLEGVESFALTSPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN++  S Y++WQYWRN +DADV  F K  T LPM EI R+A L+G EINEAKK
Sbjct: 241 ADGAVWLNEDQLSAYDYWQYWRNTEDADVERFLKLFTLLPMDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGRE A+ AA  A + F+    +  +PTI I+K ++  G+G+LT  V AG
Sbjct: 301 VLATEATALLHGREAADAAAETARKAFEEGQSAAGLPTIEIAKSDLEAGLGILTAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  E RR++K  A+KIN+   S+ +  I   D    G +KLS GKK H++  
Sbjct: 361 LCASNGEVRRNIKGGAVKINDKGESSHERSITPADITEDGIVKLSLGKKKHVLLK 415


>gi|304391532|ref|ZP_07373474.1| tyrosyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295761|gb|EFL90119.1| tyrosyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 416

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 231/415 (55%), Positives = 308/415 (74%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL+ L ERGFIHQIS+   LD L ++ VVTAYIG+D TA SLH G +TQ+MLL
Sbjct: 1   MSRFKSDFLATLDERGFIHQISDETGLDDLLTKEVVTAYIGFDATAKSLHVGSMTQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W Q+TGH+P++LMGGGT+++GDPS +DESR+MM ++ I +N   I+  F  F+ +G GK
Sbjct: 61  HWFQQTGHRPVALMGGGTTMVGDPSGKDESRQMMTAEIIADNKTSIQKCFDPFLTFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + Y++ LR+ G   SVN ML+ +SV++RL REQ LSFLEFNYM LQ
Sbjct: 121 NDAIMADNADWLLDLNYVEFLRDYGKHLSVNAMLARDSVKTRLDREQHLSFLEFNYMCLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYD+VEL++ YDCRLQ+GGSDQWGNI+ G+DLG R  TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDYVELSRRYDCRLQIGGSDQWGNILSGVDLGRRSGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+W+N++M   ++FWQYWRN +DADV  F K  TTLPM EI R++ L+G E+N+AKK
Sbjct: 241 ASGAVWMNEDMLPVFDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALEGNELNDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T MVHGR+ AEKAA  A + F+    S  +PTIS+   +   G G+L L+V AG
Sbjct: 301 VLATETTAMVHGRDAAEKAAETARQTFEQGTVSADLPTISVPAGDFEAGTGILGLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH+K  A+K+N+  +S+E++ +    F + G +KLSFGKK H++  
Sbjct: 361 LAGSNGEARRHIKGGAVKVNDQAVSDERMMLDKS-FLTDGAVKLSFGKKRHVLIR 414


>gi|163868345|ref|YP_001609554.1| tyrosyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161018001|emb|CAK01559.1| Tyrosyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 417

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 251/415 (60%), Positives = 323/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+  V+AY G+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSDFLHIMSERGFIHQISDEKGLDDLFSKETVSAYTGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI+LMGGGT +IGDPSF+DE+RR++  ++I  NI+ IK +F++++ +G  +
Sbjct: 61  YWLQKTGHRPIALMGGGTGLIGDPSFKDEARRLLTQEDIAANIDGIKKVFANYLTFGDRE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCHLNYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  TTLPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMDEILKLSLLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A+ AA  A + F+     +++PT+ +S  E+  G GLL+L+VKAG
Sbjct: 301 ILATEVTAMLHGRALADAAAETARKTFEEKTLGENLPTVEMSAIELKTGTGLLSLLVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   I++N+ II +E   I  +D  + G IKLSFGKK HI+  
Sbjct: 361 LAKSNSEARRHIQGGGIRVNDQIIKDETHLIIEKDVTAEGIIKLSFGKKKHILIK 415


>gi|319405666|emb|CBI79289.1| Tyrosyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 417

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 245/415 (59%), Positives = 319/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL  +SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHTISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  IK IF++++ +G  K
Sbjct: 61  HWLQKTGHRPIILMGGGTGLIGDPSFKDEARRLLTHNDIIENIMSIKKIFTNYLTFGNKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR +G +FS+NRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCHLNYLEFLRNVGKYFSINRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLPM+EI +++ L+  EINEAKK
Sbjct: 241 LNGAIWLNADMFSPYEFWQYWRNTEDLDVTRFLKLYTTLPMTEIAKLSALKSAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A +A   A + F+  +  +++P I I+  E+  G+G+LTL+VKAG
Sbjct: 301 ILATEVTAMLHGRTLANEALETACKTFEEKMFGENLPNIKINATELKAGIGVLTLLVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARR+++   +++N+ II +EK  I  +D ++   IKLSFGKK H++  
Sbjct: 361 LARSNSEARRYIQGGGVRVNDQIIEDEKHLIVEKDVNANEVIKLSFGKKKHVLIK 415


>gi|239831801|ref|ZP_04680130.1| tyrosyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824068|gb|EEQ95636.1| tyrosyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 417

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 245/415 (59%), Positives = 318/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P++LMGGGT ++GDPSF+DE+R++M    I ENI  IK +F++++ +G G 
Sbjct: 61  HWLQQTGHRPVALMGGGTGMVGDPSFKDEARKLMTEDTIVENIAGIKRVFANYLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 TDALMVNNADWLRNINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K +D RLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRHDIRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN EM S Y+FWQYWRN +DADV  F K  TTLP+ EI ++A L+G EINEAKK
Sbjct: 241 LGGAIWLNAEMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIAKLATLEGVEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNGGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMMVDAGALNDQGVIKLSLGKKRHVLIR 415


>gi|225627412|ref|ZP_03785449.1| tyrosyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254706868|ref|ZP_05168696.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710023|ref|ZP_05171834.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714025|ref|ZP_05175836.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716917|ref|ZP_05178728.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031518|ref|ZP_05445132.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159648|ref|ZP_05457405.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254922|ref|ZP_05460458.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260168650|ref|ZP_05755461.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261218724|ref|ZP_05933005.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261222104|ref|ZP_05936385.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314334|ref|ZP_05953531.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317570|ref|ZP_05956767.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321778|ref|ZP_05960975.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261758124|ref|ZP_06001833.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988604|ref|ZP_06101161.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265998069|ref|ZP_06110626.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|225617417|gb|EEH14462.1| tyrosyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|260920688|gb|EEX87341.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260923813|gb|EEX90381.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294468|gb|EEX97964.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296793|gb|EEY00290.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303360|gb|EEY06857.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738108|gb|EEY26104.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262552537|gb|EEZ08527.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660801|gb|EEZ31062.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 417

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELDGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|121602511|ref|YP_989096.1| tyrosyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614688|gb|ABM45289.1| tyrosyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 417

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 323/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL ++ ERGFIHQIS+ + LD L  + +VTAYIG+D T+SSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHVMKERGFIHQISDEKGLDDLFLKEIVTAYIGFDPTSSSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGHKPI L+GGGT +IGDPSF++ESR ++   +I +NI  IK +F++++ +G  K
Sbjct: 61  YWLQKTGHKPIVLIGGGTGMIGDPSFKEESRILLTQDDIAKNIVGIKKVFANYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC+I Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDAGIVNNAEWLCNINYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 SYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGVKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGAIWLN +M SPY FWQYWRN +DADV  F K  TTLPM+EI +++ LQG EINEAKK
Sbjct: 241 LSGAIWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMNEIAKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HG   A +AA  A + F+      ++P I I+  E+ +G GLL+L+V+AG
Sbjct: 301 ILATEITAMLHGYTVANEAAETARKTFEEKTLGDNLPAIKINAIELKKGAGLLSLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   +++N+ I+++E   I  +D ++T ++K+SFGKK HI+  
Sbjct: 361 LAKSNSEARRHIQGGGVRVNDQIVTDETRLISEEDINATESVKISFGKKKHILIK 415


>gi|299133781|ref|ZP_07026975.1| tyrosyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591617|gb|EFI51818.1| tyrosyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 417

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 232/415 (55%), Positives = 307/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A+KSDFL++L +RG IHQIS+P  LD  C++G +TAY+GYD TA+SLH G+L  + +L
Sbjct: 1   MTAYKSDFLNVLEQRGLIHQISDPAALDDACTKGPITAYVGYDATATSLHIGNLISVTML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRDE R+++    I  NIE IK IF   ++YG G 
Sbjct: 61  YWLQQTGHRPITLMGGGTSMVGDPSFRDEQRKLLDEATIASNIEGIKKIFGRILRYGEGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + Y+  LR++G +FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDALMINNAEWLLKLNYVSFLRDVGRYFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVE+ + Y C LQMGGSDQWGNII G+DL  R+  P+L+ALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFVEINRRYGCILQMGGSDQWGNIINGVDLSHRMGGPQLYALTTPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN ++ SPY+FWQY+RN +DADV  F K  T LP++EI R+ KL G EINEAKK
Sbjct: 241 AKGAVWLNGDVFSPYDFWQYFRNTEDADVGRFLKVFTRLPLNEIARLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGR  A++AA  A   F+    +Q++PT+ IS+ E+  G  +L L VKAG
Sbjct: 301 ILATEATAVVHGRVAADEAAETARRTFEEGAIAQNLPTLEISRGELESGASVLALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   I++N++ ++++K+ +        G IKLS GKK H++  
Sbjct: 361 LVASNGEARRQIKGGGIRVNDTPVTDDKMLLTPDVLTPEGVIKLSLGKKRHVLLK 415


>gi|125973241|ref|YP_001037151.1| tyrosyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003719|ref|ZP_05428707.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417441|ref|ZP_06248461.1| tyrosyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|254783592|sp|A3DDC9|SYY_CLOTH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|125713466|gb|ABN51958.1| tyrosyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992280|gb|EEU02374.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408843|gb|EFB39101.1| tyrosyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940528|gb|ADU74562.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 408

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 179/413 (43%), Positives = 264/413 (63%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S     L ERG+I Q+++  ++  L  +  +T YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MSSVFETLKERGYIAQLTHEEKIKELLEKEKITFYIGFDPTADSLHVGHFLQMMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT+++GDP+ R + R+MM  +EI+ N +  K   S FI++G G   A+
Sbjct: 61  KAGHRPIALIGGGTAMVGDPTGRTDMRKMMTREEIKHNADCFKKQLSKFIEFGEG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + YI+ LR+IG  FSVNRML+ E  +SRL  E+ LSF+EFNYM++Q+YDF
Sbjct: 119 MVDNADWLLDLNYIEFLRDIGVHFSVNRMLTAECFKSRL--ERGLSFIEFNYMLMQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L K Y C +Q+GG DQW NI+ GIDL  R +  +++ +T  LLTT+ G KMGKT  GA
Sbjct: 177 LKLYKEYGCIMQLGGDDQWSNILGGIDLIRRKEGKEVYGMTFTLLTTSEGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   TSPY F+QYWRNI DADV+   K LT +PM EI+  AKL+ +EIN AKK +A 
Sbjct: 237 LWLDANKTSPYEFYQYWRNIHDADVIKCLKLLTFVPMEEIEEYAKLKDQEINIAKKRLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG EEA  A   A   F+    + +MPT  ++  E+S G+ ++ L++K     S
Sbjct: 297 EVTKLIHGEEEALNAQKTAEALFEKGASTDNMPTTEVASGELSNGINIIDLLLKTKLIPS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             E RR ++   I +N+  +      + + DF + G + +  GKK +    L 
Sbjct: 357 KGEGRRLIEQGGISVNDVRVEGFDRLVTMDDF-NNGELIIKKGKKTYHRVKLV 408


>gi|159184939|ref|NP_354812.2| tyrosyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81493394|sp|Q8UED2|SYY_AGRT5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|159140217|gb|AAK87597.2| tyrosyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 417

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 245/415 (59%), Positives = 317/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+   LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSRFKSDFLRTLDERGFIHQISDEAGLDELFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  +K +F++++ Y   +
Sbjct: 61  HWMQKTGHQPISLMGGGTGMVGDPSFKEEARKLMTIDMIEDNITSLKHVFANYLDYDRAE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NPALMINNADWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNQRTGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLNK++   Y+FWQYWRN +DADVV FAK  TTLPM EI R+A L G EINEAKK
Sbjct: 241 ASGAVWLNKDLLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIARIATLGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    ++++P+I +   E+  G+G+L+LIV+AG
Sbjct: 301 ILATEVTAILHGRAAAEEAAETARKTFEEGALAENLPSIEVPTSELDAGVGVLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH++  A+KIN   +S+E+  I   +    G IKLS GKK H++  
Sbjct: 361 LASSNGEARRHVQGGAVKINEQGVSDERQIIGTGEVTGDGVIKLSVGKKKHVLVR 415


>gi|319407238|emb|CBI80877.1| Tyrosyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 417

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 250/415 (60%), Positives = 320/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MYAFKSEFLRIISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  IK IF+S++ +G  K
Sbjct: 61  HWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDISENIMSIKKIFTSYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR +G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLSYLEFLRSVGKYFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K YD R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYDLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLP++EI +++ L+  EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLPLTEIAKLSALKSTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITAMLHGRTLANEALETARKTFEEKTFGENLPSIKINATELKVGIGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARR+++   I++N+ II NE   I  +D +    IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRYVQGGGIRVNDQIIENETHLIVEKDVNVDEVIKLSFGKKKHVLIK 415


>gi|190891958|ref|YP_001978500.1| tyrosyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190697237|gb|ACE91322.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|327191064|gb|EGE58117.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 418

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 246/415 (59%), Positives = 317/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSEFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M  + I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARKLMTIETIEQNIASIKRCFSNYLDYDKSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KK
Sbjct: 241 ASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEVTAILHGRAAAEQAAETARKTFEEGGLSENLPSVDIPGTELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAGSNGEARRHVQGGAVRINDEAVSDERRLIGSDEITADGVIKLSLGKKKHILIR 415


>gi|17987330|ref|NP_539964.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|62289867|ref|YP_221660.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699794|ref|YP_414368.1| tyrosyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|148560522|ref|YP_001258899.1| tyrosyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|189024109|ref|YP_001934877.1| tyrosyl-tRNA synthetase [Brucella abortus S19]
 gi|237815361|ref|ZP_04594359.1| tyrosyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689170|ref|ZP_05152424.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697305|ref|ZP_05159133.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730203|ref|ZP_05188781.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256044594|ref|ZP_05447498.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256369352|ref|YP_003106860.1| tyrosyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260545389|ref|ZP_05821130.1| tyrosyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260563946|ref|ZP_05834432.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260754669|ref|ZP_05867017.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757892|ref|ZP_05870240.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761715|ref|ZP_05874058.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|265991018|ref|ZP_06103575.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|294852280|ref|ZP_06792953.1| tyrosyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|306840439|ref|ZP_07473199.1| tyrosyl-tRNA synthetase [Brucella sp. BO2]
 gi|306843821|ref|ZP_07476419.1| tyrosyl-tRNA synthetase [Brucella sp. BO1]
 gi|75496888|sp|Q57DI5|SYY_BRUAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81851813|sp|Q8YGV8|SYY_BRUME RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97197584|sp|Q2YNR0|SYY_BRUA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17983012|gb|AAL52228.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|62195999|gb|AAX74299.1| TyrS, tyrosyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615895|emb|CAJ10899.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ib:Tyrosyl-tRNA synthetase, class Ib:RNA-binding S4
           [Brucella melitensis biovar Abortus 2308]
 gi|148371779|gb|ABQ61758.1| tyrosyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|189019681|gb|ACD72403.1| tyrosyl-tRNA synthetase [Brucella abortus S19]
 gi|237790198|gb|EEP64408.1| tyrosyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|255999512|gb|ACU47911.1| tyrosyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260096796|gb|EEW80671.1| tyrosyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260153962|gb|EEW89054.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260668210|gb|EEX55150.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672147|gb|EEX58968.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674777|gb|EEX61598.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|263001802|gb|EEZ14377.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|294820869|gb|EFG37868.1| tyrosyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|306275899|gb|EFM57615.1| tyrosyl-tRNA synthetase [Brucella sp. BO1]
 gi|306289573|gb|EFM60788.1| tyrosyl-tRNA synthetase [Brucella sp. BO2]
          Length = 417

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|256061027|ref|ZP_05451183.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325026|ref|ZP_05964223.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301006|gb|EEY04503.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 417

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGGLSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|319898911|ref|YP_004159004.1| Tyrosyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402875|emb|CBI76426.1| Tyrosyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 417

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 246/415 (59%), Positives = 320/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I++ERGFI+QIS+ + LD L S+  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHIMNERGFINQISDKKGLDDLFSKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  I+ IF+ ++ +G  K
Sbjct: 61  YWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDIAENITSIEKIFTKYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNVEWLCHLNYLEFLRDVGKYFSVNRMLSFDSVRLRLEREYSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLT +SGTKMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTASSGTKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTL M+EI +++ LQ  EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLSMTEIAKLSALQSTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEVTAMLHGRALANEALETARKTFEEKTFGENLPSIEINATELKIGIGLLTLLVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARR+++   ++IN+ II +E   I  +D ++   IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRYVQGGGVRINDQIIEDEMYFIVEKDVNANEVIKLSFGKKKHVLIK 415


>gi|254719024|ref|ZP_05180835.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984014|ref|ZP_06096749.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306840088|ref|ZP_07472874.1| tyrosyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662606|gb|EEZ32867.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306404816|gb|EFM61109.1| tyrosyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 417

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDKLLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|256257420|ref|ZP_05462956.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260883695|ref|ZP_05895309.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248269|ref|ZP_06931987.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260873223|gb|EEX80292.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175438|gb|EFH34785.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 417

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 242/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A+++N+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRVNDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|225852437|ref|YP_002732670.1| tyrosyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256264069|ref|ZP_05466601.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225640802|gb|ACO00716.1| tyrosyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094264|gb|EEZ18134.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408951|gb|ADZ66016.1| tyrosyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538665|gb|ADZ86880.1| tyrosyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 417

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNAEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|312112867|ref|YP_004010463.1| tyrosyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311217996|gb|ADP69364.1| tyrosyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 420

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 211/414 (50%), Positives = 300/414 (72%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PA  SDF+ IL ERG++HQ+S+   L    ++G +TAYIG+D TA SLH GHL  +M+L 
Sbjct: 4   PATHSDFVQILKERGYLHQVSDEEGLRKRAAEGRITAYIGFDCTAPSLHVGHLISIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK+GH+PI L+GGGT+ +GDPS +DE R+++   +I  N   +K ++  F+ +G G  
Sbjct: 64  ILQKSGHRPIVLLGGGTTKVGDPSGKDEQRKILSQADIDFNKASLKTVYERFLTFGDGPA 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M +N+ WL S++YI+ LR+ G  F++NRML+F+SV+ RL REQ L+FLEFNYM+LQA
Sbjct: 124 DAIMADNDEWLSSLRYIEFLRDYGRHFTINRMLTFDSVKLRLDREQPLTFLEFNYMLLQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+EL++ Y C LQMGGSDQWGNI+ G++LG R+   +LFALT+PLLTT+SG KMGK+ 
Sbjct: 184 YDFLELSRRYGCVLQMGGSDQWGNIVNGMELGRRVDGRELFALTTPLLTTSSGAKMGKSA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN ++ SPY +WQYWRN +D DV  F K  T +P+ EI R+  LQG EINEAKKI
Sbjct: 244 GGAVWLNADLLSPYEYWQYWRNTEDGDVGRFLKLFTEMPLDEIARLEALQGAEINEAKKI 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +ATE+T ++HGRE AE AA  A   F+    ++ +PT+ I + E++ G+G+L   VKAG 
Sbjct: 304 LATEVTALLHGREAAETAADTARRAFEEGAAAEGLPTVEIPRGELAEGVGILNAAVKAGL 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             ST++ARR +K  A+K+N+  +++++  + L + D+ G IKLS GKK H++  
Sbjct: 364 VASTSDARRQIKGGALKVNDVAVTDDRASVSLANLDAEGVIKLSLGKKRHVLLK 417


>gi|163794305|ref|ZP_02188277.1| Tyrosyl-tRNA synthetase, class Ib [alpha proteobacterium BAL199]
 gi|159180473|gb|EDP64994.1| Tyrosyl-tRNA synthetase, class Ib [alpha proteobacterium BAL199]
          Length = 417

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 205/417 (49%), Positives = 286/417 (68%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +SDFL  +++RGF HQ ++   LD   S  +VT YIG+D TA SLH G L Q+MLL
Sbjct: 1   MTTPRSDFLKAITDRGFFHQCTDLEALDAEFSSKMVTGYIGFDCTADSLHIGSLLQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGHKPI LMGGGTS +GDPSF+DE+R+++  ++I  N   I  +F  ++ +G   
Sbjct: 61  RWMQKTGHKPIVLMGGGTSKVGDPSFKDEARKLLSEEDIARNKAGILQVFDKYLAFGDAA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  ++YI  LR+ G+ FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNADWLDKLEYIPFLRDYGAHFSVNRMLSFDSVKLRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL + Y C LQMGGSDQWGNI+ G++L  R+    +F LTSPL+TT+SG KMGKT
Sbjct: 181 AYDFLELRRRYGCVLQMGGSDQWGNIVNGVELTRRVDQQTIFGLTSPLITTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  S Y+FWQ+WRN DDADV  F K  T +P+ E+ ++  L G EINEAKK
Sbjct: 241 AQGAVWLNADRLSVYDFWQFWRNTDDADVGRFLKLFTEMPLDEVAKLEALGGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T + HGR  A+ AA  A + F+    ++ +P++ + + E++ G+ ++  + +AG
Sbjct: 301 ILATEVTALCHGRAAADDAAETARQTFEAGNSAEGLPSVDVPRSELASGLSVVEALRRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            A S  EARR ++    ++N+  + +E   +     D  G IKLS G+K H +  + 
Sbjct: 361 LAASNGEARRLIRGGGARVNDQPVDDENATLGESSLDGDGVIKLSSGRKRHALLRVA 417


>gi|114704656|ref|ZP_01437564.1| tyrosyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539441|gb|EAU42561.1| tyrosyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 416

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 242/415 (58%), Positives = 310/415 (74%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL  LSERGFIHQ S+   LD L     VT YIG+D TA SLH G L Q+M+L
Sbjct: 1   MSGFRSDFLHALSERGFIHQTSDDTRLDDLFRTETVTGYIGFDPTAKSLHVGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGHKPI+LMGGGT +IGDPSF+DE+R++  S+ I+EN+  I+  F +++  G G+
Sbjct: 61  HWMQKTGHKPIALMGGGTGMIGDPSFKDEARKLQTSETIEENLAGIRRGFENYLTMGDGQ 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  I Y+  LR++G  FSVNRMLSFESV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVNNADWLLDINYVAFLRDVGRHFSVNRMLSFESVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y CRLQMGGSDQWGNI+ GIDLG R++  +LFALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELYKRYGCRLQMGGSDQWGNIVNGIDLGRRMEGAELFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +M SPY+FWQYWRN +DADV  F K  T +PM EI R+A L G EIN+AKK
Sbjct: 241 ADGAVWLNPDMKSPYDFWQYWRNTEDADVERFLKLYTVMPMDEIARLANLGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +ATE+T M+HGRE A+ AA  A + F+  I S+++P+I++   E+  G GLL+++V AG
Sbjct: 301 TLATEVTAMLHGREAADAAAETARQTFEEGIASENLPSIAVPSAELETGTGLLSVLVAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH+K  A+K+N+  +S+E++Q+ ++     G+IKLS G+K H +  
Sbjct: 361 LAGSNGEARRHIKGGAVKVNDETVSDERMQLDMK-LTRDGSIKLSVGRKKHALVK 414


>gi|315122362|ref|YP_004062851.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495764|gb|ADR52363.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 418

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 332/417 (79%), Positives = 380/417 (91%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL+ILSERGFIHQISNP+ELD LC    +TAYIGYD TASSLH GHLTQLM+L
Sbjct: 1   MSVFKSDFLNILSERGFIHQISNPQELDKLCYNSTITAYIGYDPTASSLHVGHLTQLMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           FWLQKTGH+PISLMGGGT +IGDPSF  E+RRM+  QEIQ+NI+ IK IFS+FI+YGTGK
Sbjct: 61  FWLQKTGHRPISLMGGGTGMIGDPSFISEARRMIGVQEIQKNIKSIKDIFSAFIRYGTGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALMLNN+ WL  IKYID LRE+GS FSVNRMLSF+SVRSRL+REQSLSFLEFNYMILQ
Sbjct: 121 NDALMLNNDAWLSPIKYIDFLREVGSCFSVNRMLSFDSVRSRLQREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL+KNYDCRLQMGGSDQWGN+ICGI+LG RLKTP+LFALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELSKNYDCRLQMGGSDQWGNMICGIELGGRLKTPQLFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GAIWLNKEMTSPY+FWQYWRNIDDADVV+FAKRLTTLP+SEI R+ KLQ KE+NEAKK
Sbjct: 241 AAGAIWLNKEMTSPYDFWQYWRNIDDADVVNFAKRLTTLPISEIHRIEKLQEKELNEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           IIATEITTMVHG+ EAEKAATAAMECFDM+++S++MPTISISK E+++G+G+LTLIVKAG
Sbjct: 301 IIATEITTMVHGKAEAEKAATAAMECFDMNMYSENMPTISISKAEINQGIGILTLIVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           FA ST+EARRH++SNAIK+N+++ISNEK  I+L+DFDS G IKLSFGKK HIIC +C
Sbjct: 361 FAVSTSEARRHIQSNAIKVNDNVISNEKAHIELKDFDSAGVIKLSFGKKRHIICQVC 417


>gi|23501810|ref|NP_697937.1| tyrosyl-tRNA synthetase [Brucella suis 1330]
 gi|161618882|ref|YP_001592769.1| tyrosyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|254701686|ref|ZP_05163514.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254704230|ref|ZP_05166058.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|260566523|ref|ZP_05836993.1| tyrosyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261752237|ref|ZP_05995946.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261754896|ref|ZP_05998605.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|81752714|sp|Q8G105|SYY_BRUSU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23347743|gb|AAN29852.1| tyrosyl-tRNA synthetase [Brucella suis 1330]
 gi|161335693|gb|ABX61998.1| Tyrosyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156041|gb|EEW91121.1| tyrosyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261741990|gb|EEY29916.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261744649|gb|EEY32575.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 417

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNGQGLIKLSLGKKRHVLIR 415


>gi|15965492|ref|NP_385845.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307302613|ref|ZP_07582369.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307318460|ref|ZP_07597894.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|81634526|sp|Q92PK5|SYY_RHIME RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|15074673|emb|CAC46318.1| Probable tyrosyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306895800|gb|EFN26552.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306902977|gb|EFN33568.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 417

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 248/415 (59%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQ S+   LD L     VTAYIG+D TA+SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLHTLSERGFIHQTSDDAGLDQLFRTETVTAYIGFDPTAASLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS++++YG G 
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLRYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELYERTGCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGA+WLN +M  PY FWQYWRN +DADV  F K  TTLPM+EI+R++KL G EINE KK
Sbjct: 241 LSGAVWLNPDMLGPYEFWQYWRNTEDADVARFLKLYTTLPMAEINRLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE+T M+HGR  AE+AA  A + F+    ++++P++ +   E+  G+GLLTL+V+AG
Sbjct: 301 VLATEVTAMLHGRAAAEQAAETARKTFEEGALAENLPSVEVPAPELESGLGLLTLLVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A++IN+  +S+E+  I   D    G IKLS GKK H++  
Sbjct: 361 LAASNGEARRHVQGGAVRINDDQVSDERRVIGSGDVTGDGVIKLSLGKKKHLLVR 415


>gi|256113474|ref|ZP_05454308.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994855|ref|ZP_06107412.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262765968|gb|EEZ11757.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 417

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 242/415 (58%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|325293230|ref|YP_004279094.1| Tyrosyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061083|gb|ADY64774.1| Tyrosyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 417

 Score =  401 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 318/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+   LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSRFKSDFLRTLDERGFIHQISDESGLDELFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  +K +F++++ Y   +
Sbjct: 61  HWMQKTGHQPISLMGGGTGMVGDPSFKEEARKLMTIDMIEDNITSLKHVFANYLDYDRAE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NPALMINNADWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNQRTGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLNK++   Y+FWQYWRN +DADVV FAK  TTLPM EI+R+A L G EINEAKK
Sbjct: 241 ASGAVWLNKDLLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIERIAALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    ++++P+I +   E+  G+G+L+LIV+AG
Sbjct: 301 ILATEVTAILHGRAAAEEAAETARKTFEEGALAENLPSIEVPASELDAGVGVLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+KIN+  +S+++  I   +    G IKLS GKK H++  
Sbjct: 361 LAGSNGEARRHVQGGAVKINDKGVSDDRQMIGSAEITGDGIIKLSVGKKKHVLVR 415


>gi|86750115|ref|YP_486611.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86573143|gb|ABD07700.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 418

 Score =  401 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 230/418 (55%), Positives = 312/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L +RGF+HQ+S+P  LD L ++G V AY+GYD TA SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQQRGFVHQMSDPESLDALAARGEVVAYVGYDCTAPSLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++   +I  N E IKG F+ FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYDQIDANKESIKGTFAKFIKFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LR+IG  FS+NRML+ +SVR RL+REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLRDIGRHFSINRMLTMDSVRMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y+C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYNCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LP+ E++R+AKLQG EINEAKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPIDEVERLAKLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++ATE T ++HGRE AEKA   A   F+    +Q +P+I +++ E+  G+G+L    + A
Sbjct: 301 VLATEATALMHGRETAEKAEATARTTFEQGGTAQDLPSIDVTRAELDAGIGVLAAFAEKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +++N+ ++++EK+ +   D    G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLRVNDVLVTDEKMTLTPADLTPEGVIKLSMGKKKHVLLRLA 418


>gi|300023869|ref|YP_003756480.1| tyrosyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525690|gb|ADJ24159.1| tyrosyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 418

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 228/416 (54%), Positives = 296/416 (71%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL I++ERGFIHQ S+   LD   S+G + AY GYD TA SLH GHL  +M+L
Sbjct: 1   MPTLKSEFLQIMTERGFIHQCSDLDGLDKAGSEGRIVAYAGYDCTAPSLHVGHLISIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTG KPI+LMGGGT+ +GDPS +DE+R++   +EI  N E IK +FS+F+ +G+ K
Sbjct: 61  SWLQKTGGKPIALMGGGTTRVGDPSGKDETRQIRTVEEIDANKESIKRVFSNFLTFGSAK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM++N  WL  + YI+ LR++G  FSVNRML+ +S + RL REQ LSF+EFNYM+LQ
Sbjct: 121 SDALMVDNAEWLAPLNYIEFLRDVGRHFSVNRMLTMDSAKLRLDREQELSFIEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-FALTSPLLTTASGTKMGK 239
           +YDFVEL + Y C LQMGGSDQWGNI+ GIDLG R+   +  F LT PLLTT+SG KMGK
Sbjct: 181 SYDFVELNRRYGCNLQMGGSDQWGNIVTGIDLGRRMGVKEQLFGLTCPLLTTSSGAKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T SGA+WLN+   S Y++WQ+WRN +DADV  F K  T LP+ EI R++ L G EINEAK
Sbjct: 241 TASGAVWLNEAQLSAYDYWQFWRNTEDADVARFLKLFTMLPLDEIARLSSLGGAEINEAK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           K +ATE T +VHGRE+AE AA  A + F+    +  +PTI IS  E   G+G+LT  VKA
Sbjct: 301 KTLATEATALVHGREKAEAAAETARKTFEQGALATDLPTIEISSAEFDAGLGVLTAFVKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G   S +EARR ++   +KIN+  ++++K  IK  D  S G IKLS GKK H++  
Sbjct: 361 GLVASNSEARRQIQGGGLKINDEAVTSDKAVIKATDAVSNGVIKLSLGKKKHVLLK 416


>gi|209885123|ref|YP_002288980.1| tyrosyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873319|gb|ACI93115.1| tyrosyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 417

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 229/415 (55%), Positives = 303/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KSDFL++L +RG IHQIS+   LD  C++G +TAY+GYD TA+SLH G+L  + +L
Sbjct: 1   MTVYKSDFLNVLEQRGLIHQISDAEGLDDACTKGPITAYVGYDATATSLHIGNLISVTML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRD+ R+++    I  NIE IK IF   ++YG G 
Sbjct: 61  YWLQQTGHRPITLMGGGTSMVGDPSFRDDQRKLLDEATIASNIEGIKKIFGRILRYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + Y+  LR++G +FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDALMINNADWLLKLNYVSFLRDVGRYFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVE+ + Y C LQMGGSDQWGNII G+DL  R+  P+L+ALT+PLLTTASG KMGK+
Sbjct: 181 GYDFVEINRRYGCILQMGGSDQWGNIINGVDLSHRMGGPQLYALTTPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E+ SPY+FWQY+RN +DADV  F K  T LP+ EI ++ KL G EINEAKK
Sbjct: 241 AKGAVWLNGELFSPYDFWQYFRNTEDADVGRFLKVFTRLPLDEIAKLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGRE AE+AA  A   F+    ++++PT  I + E+  G G++ L VKAG
Sbjct: 301 ILATEATAVVHGREAAEEAAETARRTFEEGAIAENLPTFEIPQAELEAGAGVVALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  ++++K+ +        G IKLS GKK HI+  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDKPVTDDKMALTPAALTPEGVIKLSLGKKRHILLK 415


>gi|39935526|ref|NP_947802.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81562733|sp|Q6N703|SYY_RHOPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39649379|emb|CAE27901.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 418

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 237/418 (56%), Positives = 312/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LREIG  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLREIGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T ++HGRE A+KA T A   F+    +Q +P++ IS+ E+  G+G+L    +  
Sbjct: 301 ILATEATALMHGREAADKAETTARTTFEQGGTAQDLPSVEISRGELDAGIGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ +++EK+ +   D  S G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVTDEKMTLTATDLSSDGVIKLSMGKKKHVLLRLA 418


>gi|319408607|emb|CBI82262.1| Tyrosyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 417

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 250/415 (60%), Positives = 321/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L S+ +VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHIMSERGFIHQISDEKGLDDLFSKEIVTAYIGFDPTALSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I +NI  I+ +F++++ +G GK
Sbjct: 61  HWLQKTGHRPIVLMGGGTGVIGDPSFKDEARRLLTHDDIAKNIVGIEKVFANYLTFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC +KY++ LR+IG  FSVNRMLSF+SV+ RL+RE  LSFLEFNYMILQ
Sbjct: 121 TDARIVNNAEWLCDLKYLEFLRDIGKHFSVNRMLSFDSVKLRLERENFLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL  P+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIINGIELGHRLGAPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +DADV+ F K  TTLPM+EI R++ LQG EINEAKK
Sbjct: 241 LNGAIWLNSDMLSPYQFWQYWRNTEDADVIRFLKLYTTLPMNEIARLSTLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HG+  A+ AA  A + F+    + ++PTI I+  E+  G GLL+L+V+AG
Sbjct: 301 ILATEITAMLHGKALADAAAETARKTFEEKTLADNLPTIEINATELKIGTGLLSLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   +++N+ I+ +E   I   D    G IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRHVQGGGVRVNDKIVEDETRLIVEDDVSEIGVIKLSFGKKKHVLIK 415


>gi|75675860|ref|YP_318281.1| tyrosyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|97201720|sp|Q3SS12|SYY_NITWN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|74420730|gb|ABA04929.1| tyrosyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 417

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 227/415 (54%), Positives = 302/415 (72%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+ L ERGFIHQ S+   LD L S+  VTAY GYD TA SLH GHL  +M++
Sbjct: 1   MVAFKSDFLNTLQERGFIHQCSDFEGLDALASRNQVTAYTGYDCTAPSLHVGHLLSIMMM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TG+KPI+LMGGGT+ +GDPS RDE+R+++   +I  N E IKG F  F+ +G GK
Sbjct: 61  HWLQQTGNKPIALMGGGTTRVGDPSGRDETRKILSYDQIDANKESIKGTFLKFLVFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 NDAIMTDNAEWLTRLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VELA+ + C LQMGGSDQWGNI+ G+DLG R+ T +L+ALT PLLTT+SG KMGKT
Sbjct: 181 SYDYVELARRHGCNLQMGGSDQWGNIVNGVDLGRRMGTHQLYALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN  M   Y++WQYWRN++DADV  F K  T LPM EI ++A LQG EINEAKK
Sbjct: 241 AAGAVWLNATMLPVYDYWQYWRNVEDADVGRFLKLFTILPMGEIAKLAALQGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGR+EAEKAA  A   F+    S+ +PT+ I + E++ G G+L L VKAG
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGAISESLPTLDIPRSELASGAGVLALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  ++++K+ +        G IKLS GKK H++  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVADDKMVLTPDHLTPEGVIKLSMGKKRHVLLR 415


>gi|163843195|ref|YP_001627599.1| tyrosyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673918|gb|ABY38029.1| tyrosyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 417

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGGWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNGQGLIKLSLGKKRHVLIR 415


>gi|303241869|ref|ZP_07328363.1| tyrosyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302590543|gb|EFL60297.1| tyrosyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 409

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 180/413 (43%), Positives = 266/413 (64%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S     L +RGFI Q+++   +  L  +  VT YIG+D TA SLH GH  Q++++  +Q
Sbjct: 1   MSSVFETLKQRGFIAQVTHEETVRELLEKEKVTFYIGFDPTADSLHVGHFLQMVVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKPI+++GGGT+++GDPS + + RRMM  +EIQ N    K   S+FI +      A+
Sbjct: 61  RAGHKPIAIIGGGTAMVGDPSGKTDMRRMMTREEIQSNANNFKKQLSNFIDF--SDNKAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + Y+  LRE+G  FSVNRML+ E  +SRL  E+ LSF+EFNYM++Q+YDF
Sbjct: 119 MVDNADWLLDLNYVKFLREVGVHFSVNRMLTAECFKSRL--EKGLSFIEFNYMLMQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L +++ C L++GG DQW NI+ GI+L  R++    + +T  LLTT+ G KMGKT  GA
Sbjct: 177 LKLYQDHGCLLELGGDDQWSNILYGIELIRRVEGKDAYGMTFTLLTTSEGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   T PY+F+QYWRNI+D+DV+   K LT LP+SEID +AKL+ ++INEAKKI+A 
Sbjct: 237 LWLDPNKTPPYDFYQYWRNINDSDVIKCLKLLTFLPLSEIDELAKLKDQQINEAKKILAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG EEA KA +AA   F     S++MPT  I  +E++ G+ +L L+VK   A S
Sbjct: 297 EVTKLIHGEEEAGKAQSAAEALFVKGASSENMPTTEIGTEELANGINILDLLVKTKLAPS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             E RR ++   + +N   +      +K +DF     I +  GKK +    + 
Sbjct: 357 KGEGRRLIEQGGVSVNEEKVDKIDFMVKEEDFKDD-EIIIKKGKKVYHKVKII 408


>gi|154248394|ref|YP_001419352.1| tyrosyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|254765190|sp|A7INU9|SYY_XANP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|154162479|gb|ABS69695.1| tyrosyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 416

 Score =  399 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 218/417 (52%), Positives = 294/417 (70%), Gaps = 5/417 (1%)

Query: 1   MPA--FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M    F+SDFL  L ERG+IHQ S+   LD   ++G +TAYIG+D TASSLHAGHL  +M
Sbjct: 1   MTTQTFRSDFLRTLHERGYIHQCSDLERLDAKAAEGPITAYIGFDATASSLHAGHLLSIM 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           +L  LQ+TGH PI+LMGGGT+ IGDPS +DE+R+M+  Q+I++NI  I+ +F+ F+ +G 
Sbjct: 61  MLRTLQRTGHNPIALMGGGTTKIGDPSGKDEARKMLTDQQIEDNIASIRKVFARFLDFGA 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
           G   A M NN +WL  +KYI LLRE+G  F++NRML+F+SV+ RL+REQ L+FLEFNYMI
Sbjct: 121 G---AKMENNASWLDELKYIPLLREVGPHFTINRMLTFDSVKLRLEREQPLTFLEFNYMI 177

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQAYDFVEL   + C LQMGGSDQWGNI+ G++LG R++   LFALT+PLLTT+SG KMG
Sbjct: 178 LQAYDFVELNARHGCILQMGGSDQWGNIVNGMELGRRMRGADLFALTTPLLTTSSGAKMG 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           KT  GA+WL+ ++ SPY +WQYWRN  DADV  F K  T LP+ EI R+A L+G+EIN A
Sbjct: 238 KTAGGAVWLDADLLSPYEYWQYWRNAGDADVERFLKLFTELPLDEIARLAALEGQEINHA 297

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+++ATE T ++HGRE AEKA   +   F     +  +PT+ + +  +  G+ +    V 
Sbjct: 298 KEVLATEATALLHGREAAEKAKETSRATFADGALAVDLPTVEVPRATLEAGLPVAKAFVD 357

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG   ST+EARR +K   +K+N+  +++EK  I L      G +KLS GKK H++  
Sbjct: 358 AGLVASTSEARRQIKGGGLKVNDVTVTDEKAVIDLGALTPEGVVKLSLGKKKHVLLK 414


>gi|254502600|ref|ZP_05114751.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222438671|gb|EEE45350.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 417

 Score =  399 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 215/415 (51%), Positives = 298/415 (71%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL +LSERGF+HQIS+P+ LD LC++  VTAYIG+D TA SLHAG L  +M+L
Sbjct: 1   MSEFKSEFLKVLSERGFVHQISDPQGLDELCAKETVTAYIGFDCTAPSLHAGSLVTIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +W Q+TGH+PI+LMG GT+ +GDP+ +DESR+++  + I+EN   I+ +F   + +G G 
Sbjct: 61  YWFQQTGHRPIALMGSGTTRVGDPTGKDESRKVLSDETIEENKAGIRKVFEKLLSFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM++N  WL  + Y++ LR+IG  FSVN+M+  +SV+ RL+REQ LSFLEFNYM+LQ
Sbjct: 121 TDALMMDNADWLLKLNYMEFLRDIGRHFSVNQMIQRDSVKLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+E+ +   CRLQMGGSDQW NI+ G+DL  R ++ + FALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFLEIYQQTGCRLQMGGSDQWSNILSGVDLIRRKESKEAFALTAPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E  S Y++WQYWRN +DADV  F K  T LP++EI R+A L G  INEAKK
Sbjct: 241 AAGAVWLNEEQLSAYDYWQYWRNTEDADVEKFLKLFTILPLNEISRLAALDGAGINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T M+HGRE+AE AA  A + F+    ++ +PT+ ++  ++  G+G+L   V AG
Sbjct: 301 VLATEATAMIHGREKAEAAAETARKAFEEGQSAEGLPTVEVASADLEAGLGVLNAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  + RR++K  A+KIN+    +   Q+ L D    G IKLS GKK H++  
Sbjct: 361 LCASNGDVRRNIKGGAVKINDKGEQDANRQLTLADVTEDGIIKLSLGKKKHVLLK 415


>gi|220929497|ref|YP_002506406.1| tyrosyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999825|gb|ACL76426.1| tyrosyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 408

 Score =  399 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 173/413 (41%), Positives = 259/413 (62%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S    +L ERGFI QI++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q
Sbjct: 1   MSSVFDVLKERGFIAQITHEDEVKKLLGEKKVTFYIGFDPTADSLHIGHFLQLMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+GGGT+++GDPS +++ R+MM  + I+ N +  K   S FI +      A 
Sbjct: 61  QAGHIPIVLIGGGTAMVGDPSGKNDMRKMMTREIIKHNADSFKTQISKFIDF--SDNKAF 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + Y+  LR++G  FSVNRML+ E  ++R+  E+ L+FLEFNYM++Q+YDF
Sbjct: 119 MVDNSEWLMELNYVQFLRDVGVHFSVNRMLTAECFKTRM--EKGLTFLEFNYMLMQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + YDC+L++GG DQW NI+ GI+L  + +  +++ +T  LLTT+ G KMGKT +GA
Sbjct: 177 LVLNRKYDCQLELGGDDQWSNILGGINLVRKSEAKEVYGMTFKLLTTSEGKKMGKTENGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E T+PY F+QYWRNIDD DV +    +T LPM E+ R+  L+   INEAK ++A 
Sbjct: 237 VWLDPEKTTPYEFYQYWRNIDDNDVENCLALMTFLPMDEVRRLGSLKDAGINEAKAVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG +EA KA  AA   F     S  +P I I+  ++  G+ +  L++ AG   S
Sbjct: 297 EVTKIVHGEDEAGKAKEAAEAIFGGKGKSDSIPFIEINSADLEAGIKIADLLMAAGLTPS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +EARR ++   + +N++ I+     +   D    G + L  GKKN +   + 
Sbjct: 357 KSEARRAIQQGGVLLNDNKITGFDYTVGTNDLV-NGEMMLQKGKKNFVKIKVV 408


>gi|254780949|ref|YP_003065362.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040626|gb|ACT57422.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 418

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 418/418 (100%), Positives = 418/418 (100%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL
Sbjct: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK
Sbjct: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ
Sbjct: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT
Sbjct: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK
Sbjct: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG
Sbjct: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG
Sbjct: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418


>gi|222148510|ref|YP_002549467.1| tyrosyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735496|gb|ACM36459.1| tyrosyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 418

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 245/416 (58%), Positives = 312/416 (75%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  + ERGFIHQIS+   LD L S+  VTAYIGYD TASSLHAG L Q+M+L
Sbjct: 1   MSKFKSDFLRTMHERGFIHQISDETGLDDLLSKETVTAYIGYDPTASSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W Q TGH+PISLMGGGT ++GDPSF++E+R++M   +I++NI  IK  F+ ++ Y  G 
Sbjct: 61  HWFQATGHQPISLMGGGTGMVGDPSFKEEARQLMTVDKIEDNIASIKRCFAHYLDYDNGP 120

Query: 121 TD-ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
              ALMLNN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMIL
Sbjct: 121 KGGALMLNNAEWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYD+VEL K Y CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK
Sbjct: 181 QAYDYVELNKRYGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           + +GA+WLN ++ S Y+FWQYWRN +DADV  F K  TTLPM EI +++ L G EINE K
Sbjct: 241 SATGAVWLNADLLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIAKLSALGGAEINEVK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           KI+ATEIT ++HGR  AE+AA  A + F+    + ++P+I ++  E+  G+GLL LIVKA
Sbjct: 301 KILATEITAILHGRAAAEEAAETARKTFEEGALADNLPSIEVASAELESGIGLLALIVKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S  EARRH++  A+KIN+  +S+E++ I   +  + G IKLS GKK HI+  
Sbjct: 361 GLAASNGEARRHVQGGAVKINDQSVSDERMSIGAGEVTADGVIKLSLGKKKHILVR 416


>gi|192291117|ref|YP_001991722.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192284866|gb|ACF01247.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 418

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 236/418 (56%), Positives = 310/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LREIG  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLREIGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T ++HGRE A+KA   A   F+    +Q +P++ IS+ E+  G+G+L    +  
Sbjct: 301 ILATEATALMHGREAADKAEATARTTFEQGGTAQDLPSVEISRGELDAGIGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ + +EK+ +   D  S G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVIDEKMTLTATDLSSDGVIKLSMGKKKHVLLRLA 418


>gi|91976924|ref|YP_569583.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683380|gb|ABE39682.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 418

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 220/416 (52%), Positives = 308/416 (74%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L +RGFIHQIS+P  LD L S+  V AY+GYD TASSLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQQRGFIHQISDPESLDALASRREVVAYVGYDCTASSLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KP++LMGGGT+ +GDPS RDE+R+++  ++I+ N + IK +F++FI +G G 
Sbjct: 61  HWLQATGNKPVALMGGGTTRVGDPSGRDETRKILSLEQIEANKDSIKRVFANFITFGDGG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM++N  WL  + YI++LR++G  FSVNRML+ +SVR RL+REQ LSF+EFNYMILQ
Sbjct: 121 NKALMVDNADWLTKLNYIEMLRDLGRHFSVNRMLTMDSVRMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VEL++ + C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDYVELSRRHGCNLQMGGSDQWGNIVTGVDLGRRMGTQQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M   Y++WQYWRN +DADV  F K  T LP+ +I+R++KLQG EINEAKK
Sbjct: 241 AAGAVWLNGDMLPAYDYWQYWRNTEDADVGRFLKLFTLLPIDDIERLSKLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T +VHGR+ A+KA   A   F+    +Q +P++ +++ E+  G+ +L    + +
Sbjct: 301 ILATEATALVHGRDAADKAEATARTTFEQGGTAQDLPSVDVARAELDAGLSVLAAFAEKS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G   S  EARR +K+  +K+N+  +++EK+ +   D  + G IKLS GKK H++  
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDVPVTDEKMALTAADLTADGVIKLSMGKKKHVLLR 416


>gi|150396686|ref|YP_001327153.1| tyrosyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150028201|gb|ABR60318.1| tyrosyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 417

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 248/415 (59%), Positives = 314/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQ S+   LD L     VTAYIG+D TA+SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLHTLSERGFIHQTSDNGGLDQLFLTETVTAYIGFDPTAASLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS+++KYG G 
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLKYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELYQRTGCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGA+WLN +M  PY FWQYWRN +DADV  F K  TTLPM+EIDR++KL G EINE KK
Sbjct: 241 LSGAVWLNPDMLGPYEFWQYWRNTEDADVTRFLKLYTTLPMAEIDRLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE+T M+HGR  AE+AA  A + F+    ++++P+I +   E   G+GLL L+V+AG
Sbjct: 301 VLATEVTAMLHGRTAAEQAAETARKTFEEGALAENLPSIEVPAREFESGLGLLALMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A++IN+  +++E+  +  +D    G IKLS GKK H++  
Sbjct: 361 LAASNGEARRHVQGGAVRINDDQVTDERRVVGSRDVSGDGVIKLSLGKKKHLLVR 415


>gi|316934384|ref|YP_004109366.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315602098|gb|ADU44633.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 418

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 232/418 (55%), Positives = 311/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDAVMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVNGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T ++HGRE AEKA   A   F+    +Q +P++ I++ E+  G+G+L    +  
Sbjct: 301 ILATEATALMHGREAAEKAEATARTTFEQGGTAQDLPSVEIARAELDAGIGVLAAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ +++EK+ +   D  + G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVTDEKMTLTATDLSADGVIKLSMGKKKHVLLRLA 418


>gi|170768726|ref|ZP_02903179.1| tyrosyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122274|gb|EDS91205.1| tyrosyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 424

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVTLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    ++ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQTDPEYFFKEEDRLFGRYTLLRRGKKNYCLI 421


>gi|291165558|gb|EFE27607.1| tyrosine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 410

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 186/411 (45%), Positives = 252/411 (61%), Gaps = 3/411 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L ERGFI Q ++  E+  L  +  VT Y GYD TA SLH GH  Q M +  LQ
Sbjct: 1   MKNVYDVLLERGFIAQTTHEEEIRELLGKEKVTFYTGYDPTADSLHVGHFLQAMAMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI L+GGGT++IGDPS R + R MM  + I+ N E  K   S FI +      A+
Sbjct: 61  LAGHRPIILIGGGTAMIGDPSGRSDMRSMMTEETIRHNSECFKKQLSKFIDFTDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  ++YI  +R+IG  FSVNRMLS +  ++R++ E  LSFLEFNYM++QAYDF
Sbjct: 119 MVNNADWLMKLEYIPFIRDIGVHFSVNRMLSADCFKTRMQSEAGLSFLEFNYMLMQAYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L + YDC+L+ GG DQW NII G DL  R      + +T  LLT + G KMGKT+SGA
Sbjct: 179 YKLNELYDCKLEFGGDDQWSNIIAGTDLIRRKTAKSAYGMTFQLLTRSDGVKMGKTMSGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY+F+QYWRNI+DA V      LT LPM E+ R+  LQ  EIN+AK+++A 
Sbjct: 239 VWLDPEKTSPYDFYQYWRNIEDASVEKCLALLTFLPMEEVRRLGALQDAEINKAKEVLAF 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VH  EEA KA  AA + F     S   PT  ++K+E+ +G+G+L L+ + G + S
Sbjct: 299 EVTKIVHSEEEAIKAQEAARQLFGKGGTSADAPTTELTKEELEQGIGILDLLKQVGLSPS 358

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +E RR +   ++ +N+ II   K  I    F   G I L  GKK      
Sbjct: 359 NSEGRRLVMQGSVAVNDEIIKEPKTIIDDS-FLQDGVIMLRKGKKKFHQIK 408


>gi|148255351|ref|YP_001239936.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407524|gb|ABQ36030.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 417

 Score =  396 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 223/415 (53%), Positives = 305/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++L  RGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTGFKSDFLNVLQSRGFIHQCSDFEGLDALAAKGQATAYVGYDCTARSLHIGNFLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TG+KPI+LMGGGT+++GDPS +DE+R M   +EI+ N   I+G+F+  + YG G 
Sbjct: 61  YWLQQTGNKPITLMGGGTTMVGDPSGKDETRAMRTVEEIEANKASIRGVFAKVLAYGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 TDAIMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G++LG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRTGCRLQMGGSDQWGNIVNGVELGRRMGTEQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWLN +  SPY+FWQYWRN +DADVV F K  TTLP+SEI+++  LQG EINEAKK
Sbjct: 241 AQGAIWLNADQCSPYDFWQYWRNTEDADVVKFLKLFTTLPLSEIEKLGALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG E A  AA  A   F+    ++++PT+ +++ E+  G+G+L   VKAG
Sbjct: 301 ALADAATTLLHGEEAARTAAETARRTFEEGAIAENLPTVEVAQAELDAGLGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  +++EK+ +  ++  + G IKLS GKK H++  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVTDEKMALTAKELTAEGVIKLSLGKKRHVLVK 415


>gi|138896346|ref|YP_001126799.1| tyrosyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196249972|ref|ZP_03148667.1| tyrosyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|134267859|gb|ABO68054.1| Tyrosyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210486|gb|EDY05250.1| tyrosyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 419

 Score =  396 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 160/418 (38%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  +M L   Q+ 
Sbjct: 2   NLLEELQWRGLVNQTTDEDGLRKLLNEEKVTLYCGFDPTADSLHIGHLVTIMTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS R   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGRKSERTLNAKETVETWSARIKAQLERFLDFEAESNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR+IG  FSVN ML+ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVISFLRDIGKHFSVNYMLAKESVQSRI--EMGISFTEFSYMMLQAYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  R K   K F LT PL+T A GTK GKT SGA+
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRRTKGEAKAFGLTVPLVTKADGTKFGKTESGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID       +  E   A+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIRYLKYFTFLTKEEIDALEQELREAPEKRVAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
           +E+T +VHG E   +A   +   F   I       I      V         + L+ L+V
Sbjct: 300 SEVTKLVHGEEALNQAIRISEALFSGDIAELTAAEIEQGFKNVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI +N   I +    +  +         +  GKK + +  
Sbjct: 360 AAGISPSKRQAREDVQNGAIYVNGERIQDVGAVLTAEHRLEGRFTVIRRGKKKYYLIR 417


>gi|90424342|ref|YP_532712.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106356|gb|ABD88393.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 418

 Score =  396 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 225/416 (54%), Positives = 308/416 (74%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL++L  RGFIHQIS+P  LD L ++G V +Y+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFLNVLQSRGFIHQISDPDSLDALATRGEVVSYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N + IKG F+ FI++G GK
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKDSIKGTFAKFIRFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 SDAVMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYGCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y++WQYWRN +DADV  F K  T LP+ E+ R+A LQG++INEAKK
Sbjct: 241 AAGAVWLNGDMLSAYDYWQYWRNTEDADVERFLKLFTLLPLDEVARLAALQGQDINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T ++HGRE A+KA   A   F+    +  +PT+ +S+ E+  G+G+L    +  
Sbjct: 301 ILATEATALIHGREAADKAEATARTTFEQGGTASDLPTVELSRAELDAGLGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G   S  EARR +K+  +K+N+  +++EK+ +   D  + G IKLS GKK H++  
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDVAVTDEKMALTAADLTADGVIKLSMGKKKHVLLR 416


>gi|146340490|ref|YP_001205538.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193296|emb|CAL77312.1| tyrosine tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 417

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 223/415 (53%), Positives = 303/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++L  RGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTGFKSDFLNVLQSRGFIHQCSDFEGLDTLAAKGQATAYVGYDCTARSLHIGNFLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TG+KPI+LMGGGT+++GDPS +DE+R M   +EI+ N   I+G+F+  ++YG G 
Sbjct: 61  YWLQQTGNKPITLMGGGTTMVGDPSGKDETRAMRTVEEIEANKASIRGVFAKVLRYGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 TDAIMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G++LG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRTGCRLQMGGSDQWGNIVNGVELGRRMGTEQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWLN +  SPY FWQYWRN +DADVV F K  TTLP++EI+++  LQG EINEAKK
Sbjct: 241 AQGAIWLNADQCSPYEFWQYWRNTEDADVVKFLKLFTTLPLAEIEKLGALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG E A  AA  A   F+    ++++P + +++ E+  G+G+L   VKAG
Sbjct: 301 ALADAATTLLHGGEAARTAAETARRTFEEGAIAENLPKVEVARSELDAGLGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  +++EK+ +   D  S G IKLS GKK H++  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVTDEKMTLTRADLTSEGVIKLSLGKKRHVLVK 415


>gi|213051637|ref|ZP_03344515.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213586445|ref|ZP_03368271.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|224584042|ref|YP_002637840.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254783633|sp|C0Q5T3|SYY_SALPC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|224468569|gb|ACN46399.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322687471|gb|EFY83443.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322714506|gb|EFZ06077.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323129719|gb|ADX17149.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326627909|gb|EGE34252.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 428

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 233/425 (54%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E    A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKK
Sbjct: 361 ADLMQALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|325497175|gb|EGC95034.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 428

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 236/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLYGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNA+ IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|191165889|ref|ZP_03027726.1| tyrosyl-tRNA synthetase [Escherichia coli B7A]
 gi|190904020|gb|EDV63732.1| tyrosyl-tRNA synthetase [Escherichia coli B7A]
          Length = 424

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 157/418 (37%), Positives = 236/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRYTLLRRGKKNYCLI 421


>gi|290509251|ref|ZP_06548622.1| tyrosyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289778645|gb|EFD86642.1| tyrosyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 428

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 234/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MENLMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GDNSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  E A       F+ ++        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             LL  +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKK
Sbjct: 361 ADLLQALVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLV 425


>gi|16760464|ref|NP_456081.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16764797|ref|NP_460412.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29141776|ref|NP_805118.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56413582|ref|YP_150657.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62180037|ref|YP_216454.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161614133|ref|YP_001588098.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167551581|ref|ZP_02345335.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994279|ref|ZP_02575371.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168229823|ref|ZP_02654881.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168235521|ref|ZP_02660579.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168463140|ref|ZP_02697071.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168819199|ref|ZP_02831199.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443795|ref|YP_002040698.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448037|ref|YP_002045487.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194469349|ref|ZP_03075333.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194735512|ref|YP_002114461.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197248693|ref|YP_002146596.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197261628|ref|ZP_03161702.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197362506|ref|YP_002142143.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198244916|ref|YP_002215685.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204927912|ref|ZP_03219113.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205352838|ref|YP_002226639.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205358968|ref|ZP_02665896.2| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|213425988|ref|ZP_03358738.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213622227|ref|ZP_03375010.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213649176|ref|ZP_03379229.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213857492|ref|ZP_03384463.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|238913150|ref|ZP_04656987.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289824898|ref|ZP_06544319.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|75483517|sp|Q57PI8|SYY_SALCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81360730|sp|Q5PIK7|SYY_SALPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81416369|sp|Q7CQK7|SYY_SALTY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81628032|sp|Q8XG70|SYY_SALTI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029770|sp|A9N034|SYY_SALPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783627|sp|B5F6J8|SYY_SALA4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783628|sp|B5FIF4|SYY_SALDC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783630|sp|B5RAL0|SYY_SALG2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783631|sp|B4THC6|SYY_SALHS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783632|sp|B4T586|SYY_SALNS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783634|sp|B5BKC0|SYY_SALPK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783635|sp|B4TV08|SYY_SALSV RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|25292893|pir||AE0693 tyrosyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16419970|gb|AAL20371.1| tyrosine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502760|emb|CAD01918.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137404|gb|AAO68967.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56127839|gb|AAV77345.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62127670|gb|AAX65373.1| tyrosine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161363497|gb|ABX67265.1| hypothetical protein SPAB_01872 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402458|gb|ACF62680.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406341|gb|ACF66560.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194455713|gb|EDX44552.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711014|gb|ACF90235.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195634532|gb|EDX52884.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197093983|emb|CAR59479.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197212396|gb|ACH49793.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197239883|gb|EDY22503.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197291166|gb|EDY30519.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197939432|gb|ACH76765.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204323254|gb|EDZ08450.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272619|emb|CAR37528.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323596|gb|EDZ11435.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205327841|gb|EDZ14605.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205335458|gb|EDZ22222.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205339245|gb|EDZ26009.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205343665|gb|EDZ30429.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|267993338|gb|ACY88223.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157982|emb|CBW17477.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912432|dbj|BAJ36406.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320086075|emb|CBY95849.1| Tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321224067|gb|EFX49130.1| Tyrosyl-tRNA synthetase ; cluster 1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615071|gb|EFY11994.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619126|gb|EFY16010.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622222|gb|EFY19067.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627744|gb|EFY24534.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632911|gb|EFY29655.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636598|gb|EFY33301.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641209|gb|EFY37851.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644856|gb|EFY41389.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650308|gb|EFY46722.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655880|gb|EFY52182.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660208|gb|EFY56447.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665227|gb|EFY61415.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669484|gb|EFY65632.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673410|gb|EFY69512.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677338|gb|EFY73402.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679999|gb|EFY76038.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|323194075|gb|EFZ79274.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198557|gb|EFZ83658.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202884|gb|EFZ87919.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208603|gb|EFZ93541.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210289|gb|EFZ95185.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215857|gb|EGA00596.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223388|gb|EGA07721.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225149|gb|EGA09398.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229382|gb|EGA13505.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236881|gb|EGA20953.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240357|gb|EGA24401.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242654|gb|EGA26675.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323252430|gb|EGA36277.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323260362|gb|EGA43979.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267224|gb|EGA50709.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272743|gb|EGA56148.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326623432|gb|EGE29777.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988334|gb|AEF07317.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 424

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 232/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 364 VDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|261246653|emb|CBG24463.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 424

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 232/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIVLYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 364 VDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|161503459|ref|YP_001570571.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189029769|sp|A9MEH2|SYY_SALAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160864806|gb|ABX21429.1| hypothetical protein SARI_01533 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 428

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 234/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E    A       F+ S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLIAAKRITESLFNGSLGELSEADFEQLAQDGVPMIELEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKK
Sbjct: 361 TDLMQALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|301326605|ref|ZP_07219942.1| tyrosyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|300846722|gb|EFK74482.1| tyrosyl-tRNA synthetase [Escherichia coli MS 78-1]
          Length = 428

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 157/425 (36%), Positives = 236/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEDGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|320641992|gb|EFX11356.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
          Length = 424

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|218548767|ref|YP_002382558.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|254783607|sp|B7LQN3|SYY_ESCF3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218356308|emb|CAQ88926.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324113411|gb|EGC07386.1| tyrosyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 424

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLYGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNA+ IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|15802051|ref|NP_288073.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|291282769|ref|YP_003499587.1| Tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293414953|ref|ZP_06657596.1| tyrosyl-tRNA synthetase [Escherichia coli B185]
 gi|300821490|ref|ZP_07101637.1| tyrosyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300901554|ref|ZP_07119624.1| tyrosyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300904483|ref|ZP_07122325.1| tyrosyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300918002|ref|ZP_07134626.1| tyrosyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300924666|ref|ZP_07140616.1| tyrosyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300951219|ref|ZP_07165074.1| tyrosyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300958509|ref|ZP_07170644.1| tyrosyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300987923|ref|ZP_07178444.1| tyrosyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301026794|ref|ZP_07190198.1| tyrosyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301303150|ref|ZP_07209276.1| tyrosyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301647814|ref|ZP_07247600.1| tyrosyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|331642230|ref|ZP_08343365.1| tyrosine--tRNA ligase [Escherichia coli H736]
 gi|331647126|ref|ZP_08348220.1| tyrosine--tRNA ligase [Escherichia coli M605]
 gi|331653033|ref|ZP_08354038.1| tyrosine--tRNA ligase [Escherichia coli M718]
 gi|331673205|ref|ZP_08373973.1| tyrosine--tRNA ligase [Escherichia coli TA280]
 gi|331677503|ref|ZP_08378178.1| tyrosine--tRNA ligase [Escherichia coli H591]
 gi|332279216|ref|ZP_08391629.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
 gi|25292889|pir||F85770 tyrosine tRNA synthetase [imported] - Escherichia coli  (strain
           O157:H7, substrain EDL933)
 gi|12515629|gb|AAG56626.1|AE005387_4 tyrosine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|209769578|gb|ACI83101.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769580|gb|ACI83102.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769582|gb|ACI83103.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769584|gb|ACI83104.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769586|gb|ACI83105.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|284921562|emb|CBG34634.1| tyrosyl-tRNA synthetase [Escherichia coli 042]
 gi|290762642|gb|ADD56603.1| Tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291432601|gb|EFF05580.1| tyrosyl-tRNA synthetase [Escherichia coli B185]
 gi|300305997|gb|EFJ60517.1| tyrosyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300314825|gb|EFJ64609.1| tyrosyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300355042|gb|EFJ70912.1| tyrosyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300395332|gb|EFJ78870.1| tyrosyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300403579|gb|EFJ87117.1| tyrosyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300414799|gb|EFJ98109.1| tyrosyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300419155|gb|EFK02466.1| tyrosyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300449509|gb|EFK13129.1| tyrosyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300525993|gb|EFK47062.1| tyrosyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300841559|gb|EFK69319.1| tyrosyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301074058|gb|EFK88864.1| tyrosyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|315257562|gb|EFU37530.1| tyrosyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315299669|gb|EFU58911.1| tyrosyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|324011400|gb|EGB80619.1| tyrosyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324016573|gb|EGB85792.1| tyrosyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|331039028|gb|EGI11248.1| tyrosine--tRNA ligase [Escherichia coli H736]
 gi|331043909|gb|EGI16045.1| tyrosine--tRNA ligase [Escherichia coli M605]
 gi|331049131|gb|EGI21203.1| tyrosine--tRNA ligase [Escherichia coli M718]
 gi|331069403|gb|EGI40790.1| tyrosine--tRNA ligase [Escherichia coli TA280]
 gi|331073963|gb|EGI45283.1| tyrosine--tRNA ligase [Escherichia coli H591]
 gi|332101568|gb|EGJ04914.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
          Length = 428

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 157/425 (36%), Positives = 236/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|26247884|ref|NP_753924.1| tyrosyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91210851|ref|YP_540837.1| tyrosyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117623823|ref|YP_852736.1| tyrosyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|227885946|ref|ZP_04003751.1| tyrosyl-tRNA synthetase [Escherichia coli 83972]
 gi|300995441|ref|ZP_07181093.1| tyrosyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301051036|ref|ZP_07197879.1| tyrosyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|123266072|sp|Q1RBF8|SYY_ECOUT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083651|sp|A1ABI2|SYY_ECOK1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|26108287|gb|AAN80489.1|AE016761_64 Tyrosyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91072425|gb|ABE07306.1| tyrosyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115512947|gb|ABJ01022.1| tyrosine tRNA synthetase [Escherichia coli APEC O1]
 gi|227837125|gb|EEJ47591.1| tyrosyl-tRNA synthetase [Escherichia coli 83972]
 gi|300297303|gb|EFJ53688.1| tyrosyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300406130|gb|EFJ89668.1| tyrosyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307626876|gb|ADN71180.1| tyrosyl-tRNA synthetase [Escherichia coli UM146]
 gi|315290584|gb|EFU49958.1| tyrosyl-tRNA synthetase [Escherichia coli MS 153-1]
          Length = 428

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 236/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG +  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|215486814|ref|YP_002329245.1| tyrosyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218558508|ref|YP_002391421.1| tyrosyl-tRNA synthetase [Escherichia coli S88]
 gi|218689584|ref|YP_002397796.1| tyrosyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218695200|ref|YP_002402867.1| tyrosyl-tRNA synthetase [Escherichia coli 55989]
 gi|306813398|ref|ZP_07447588.1| tyrosyl-tRNA synthetase [Escherichia coli NC101]
 gi|312966599|ref|ZP_07780819.1| tyrosyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|97201345|sp|Q8FH88|SYY_ECOL6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783595|sp|B7URX8|SYY_ECO27 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783596|sp|B7M9Z1|SYY_ECO45 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783597|sp|B7L5J0|SYY_ECO55 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783600|sp|B7MVB5|SYY_ECO81 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|215264886|emb|CAS09272.1| tyrosyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218351932|emb|CAU97660.1| tyrosyl-tRNA synthetase [Escherichia coli 55989]
 gi|218365277|emb|CAR02998.1| tyrosyl-tRNA synthetase [Escherichia coli S88]
 gi|218427148|emb|CAR08031.2| tyrosyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222033396|emb|CAP76137.1| Tyrosyl-tRNA synthetase [Escherichia coli LF82]
 gi|294493782|gb|ADE92538.1| tyrosyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|305853143|gb|EFM53583.1| tyrosyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553660|gb|ADN46435.1| tyrosine tRNA synthetase [Escherichia coli ABU 83972]
 gi|312288709|gb|EFR16609.1| tyrosyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312946238|gb|ADR27065.1| tyrosyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|323187062|gb|EFZ72378.1| tyrosyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323952148|gb|EGB48021.1| tyrosyl-tRNA synthetase [Escherichia coli H252]
          Length = 424

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG +  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|15831600|ref|NP_310373.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|16129595|ref|NP_416154.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|74312035|ref|YP_310454.1| tyrosyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|89108479|ref|AP_002259.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|157157482|ref|YP_001462928.1| tyrosyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157161099|ref|YP_001458417.1| tyrosyl-tRNA synthetase [Escherichia coli HS]
 gi|168775869|ref|ZP_02800876.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783462|ref|ZP_02808469.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789476|ref|ZP_02814483.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|170020011|ref|YP_001724965.1| tyrosyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170081301|ref|YP_001730621.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170683918|ref|YP_001743617.1| tyrosyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187731260|ref|YP_001880393.1| tyrosyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188495334|ref|ZP_03002604.1| tyrosyl-tRNA synthetase [Escherichia coli 53638]
 gi|191173441|ref|ZP_03034969.1| tyrosyl-tRNA synthetase [Escherichia coli F11]
 gi|193070259|ref|ZP_03051203.1| tyrosyl-tRNA synthetase [Escherichia coli E110019]
 gi|208810466|ref|ZP_03252342.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816760|ref|ZP_03257880.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208821747|ref|ZP_03262067.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209398956|ref|YP_002270707.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209918951|ref|YP_002293035.1| tyrosyl-tRNA synthetase [Escherichia coli SE11]
 gi|217328817|ref|ZP_03444898.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218699794|ref|YP_002407423.1| tyrosyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705138|ref|YP_002412657.1| tyrosyl-tRNA synthetase [Escherichia coli UMN026]
 gi|238900853|ref|YP_002926649.1| tyrosyl-tRNA synthetase [Escherichia coli BW2952]
 gi|254793254|ref|YP_003078091.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256018168|ref|ZP_05432033.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
 gi|256022700|ref|ZP_05436565.1| tyrosyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260843943|ref|YP_003221721.1| tyrosyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855462|ref|YP_003229353.1| tyrosyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868129|ref|YP_003234531.1| tyrosyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|261227917|ref|ZP_05942198.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258349|ref|ZP_05950882.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|293405137|ref|ZP_06649129.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293409950|ref|ZP_06653526.1| tyrosyl-tRNA synthetase [Escherichia coli B354]
 gi|298380784|ref|ZP_06990383.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|301027691|ref|ZP_07191005.1| tyrosyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|307138293|ref|ZP_07497649.1| tyrosyl-tRNA synthetase [Escherichia coli H736]
 gi|307310790|ref|ZP_07590436.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|309788396|ref|ZP_07683000.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|312969658|ref|ZP_07783841.1| tyrosyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331657609|ref|ZP_08358571.1| tyrosine--tRNA ligase [Escherichia coli TA206]
 gi|331663109|ref|ZP_08364019.1| tyrosine--tRNA ligase [Escherichia coli TA143]
 gi|331668315|ref|ZP_08369163.1| tyrosine--tRNA ligase [Escherichia coli TA271]
 gi|331683145|ref|ZP_08383746.1| tyrosine--tRNA ligase [Escherichia coli H299]
 gi|84028838|sp|P0AGK0|SYY_ECO57 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84028839|sp|P0AGJ9|SYY_ECOLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97201988|sp|Q3Z1Z3|SYY_SHISS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083649|sp|A7ZM99|SYY_ECO24 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083650|sp|A8A0I0|SYY_ECOHS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083652|sp|B1IQB7|SYY_ECOLC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783598|sp|B5Z471|SYY_ECO5E RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783599|sp|B7NTZ5|SYY_ECO7I RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783602|sp|B1XFU9|SYY_ECODH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783603|sp|B7NB91|SYY_ECOLU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783604|sp|B6IB76|SYY_ECOSE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783605|sp|B1LEP9|SYY_ECOSM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783636|sp|B2U2D7|SYY_SHIB3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259516991|sp|C4ZYA0|SYY_ECOBW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148094|gb|AAA24707.1| tyrosyl-tRNA synthetase (tyrS) [Escherichia coli]
 gi|1787925|gb|AAC74709.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|13361813|dbj|BAB35769.1| tyrosine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|73855512|gb|AAZ88219.1| tyrosine tRNA synthetase [Shigella sonnei Ss046]
 gi|85675050|dbj|BAA15398.2| tyrosyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|157066779|gb|ABV06034.1| tyrosyl-tRNA synthetase [Escherichia coli HS]
 gi|157079512|gb|ABV19220.1| tyrosyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754939|gb|ACA77638.1| tyrosyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169889136|gb|ACB02843.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170521636|gb|ACB19814.1| tyrosyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187428252|gb|ACD07526.1| tyrosyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|187768721|gb|EDU32565.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188490533|gb|EDU65636.1| tyrosyl-tRNA synthetase [Escherichia coli 53638]
 gi|188999202|gb|EDU68188.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189370947|gb|EDU89363.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|190906283|gb|EDV65894.1| tyrosyl-tRNA synthetase [Escherichia coli F11]
 gi|192956440|gb|EDV86899.1| tyrosyl-tRNA synthetase [Escherichia coli E110019]
 gi|208724982|gb|EDZ74689.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731103|gb|EDZ79792.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208741870|gb|EDZ89552.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209160356|gb|ACI37789.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209912210|dbj|BAG77284.1| tyrosyl-tRNA synthase [Escherichia coli SE11]
 gi|217318164|gb|EEC26591.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218369780|emb|CAR17551.1| tyrosyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218432235|emb|CAR13125.1| tyrosyl-tRNA synthetase [Escherichia coli UMN026]
 gi|238863733|gb|ACR65731.1| tyrosyl-tRNA synthetase [Escherichia coli BW2952]
 gi|254592654|gb|ACT72015.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|257754111|dbj|BAI25613.1| tyrosyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759090|dbj|BAI30587.1| tyrosyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764485|dbj|BAI35980.1| tyrosyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|260449238|gb|ACX39660.1| tyrosyl-tRNA synthetase [Escherichia coli DH1]
 gi|281178710|dbj|BAI55040.1| tyrosyl-tRNA synthetase [Escherichia coli SE15]
 gi|291427345|gb|EFF00372.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291470418|gb|EFF12902.1| tyrosyl-tRNA synthetase [Escherichia coli B354]
 gi|298278226|gb|EFI19740.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299879184|gb|EFI87395.1| tyrosyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|306908968|gb|EFN39464.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|308923778|gb|EFP69281.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|309701864|emb|CBJ01176.1| tyrosyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310337943|gb|EFQ03032.1| tyrosyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315060945|gb|ADT75272.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|315136278|dbj|BAJ43437.1| tyrosyl-tRNA synthetase [Escherichia coli DH1]
 gi|315618827|gb|EFU99410.1| tyrosyl-tRNA synthetase [Escherichia coli 3431]
 gi|320186309|gb|EFW61045.1| tyrosyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320188324|gb|EFW62986.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320195465|gb|EFW70090.1| tyrosyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320647309|gb|EFX16117.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652989|gb|EFX21185.1| tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320658672|gb|EFX26349.1| tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668662|gb|EFX35467.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323152858|gb|EFZ39128.1| tyrosyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323163514|gb|EFZ49340.1| tyrosyl-tRNA synthetase [Escherichia coli E128010]
 gi|323169198|gb|EFZ54874.1| tyrosyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323169944|gb|EFZ55600.1| tyrosyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180952|gb|EFZ66490.1| tyrosyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186090|gb|EFZ71446.1| tyrosyl-tRNA synthetase [Escherichia coli 1357]
 gi|323378484|gb|ADX50752.1| tyrosyl-tRNA synthetase [Escherichia coli KO11]
 gi|323937243|gb|EGB33522.1| tyrosyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940694|gb|EGB36885.1| tyrosyl-tRNA synthetase [Escherichia coli E482]
 gi|323948066|gb|EGB44058.1| tyrosyl-tRNA synthetase [Escherichia coli H120]
 gi|323968405|gb|EGB63811.1| tyrosyl-tRNA synthetase [Escherichia coli M863]
 gi|323978223|gb|EGB73309.1| tyrosyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324119124|gb|EGC13012.1| tyrosyl-tRNA synthetase [Escherichia coli E1167]
 gi|326342004|gb|EGD65785.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343555|gb|EGD67317.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|327252753|gb|EGE64407.1| tyrosyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|330911444|gb|EGH39954.1| tyrosyl-tRNA synthetase [Escherichia coli AA86]
 gi|331055857|gb|EGI27866.1| tyrosine--tRNA ligase [Escherichia coli TA206]
 gi|331058908|gb|EGI30885.1| tyrosine--tRNA ligase [Escherichia coli TA143]
 gi|331063509|gb|EGI35420.1| tyrosine--tRNA ligase [Escherichia coli TA271]
 gi|331079360|gb|EGI50557.1| tyrosine--tRNA ligase [Escherichia coli H299]
 gi|332096089|gb|EGJ01094.1| tyrosyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|332343355|gb|AEE56689.1| tyrosyl-tRNA synthetase TyrS [Escherichia coli UMNK88]
          Length = 424

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|320652603|gb|EFX20872.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
          Length = 424

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 157/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + EQ +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREEQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|218554205|ref|YP_002387118.1| tyrosyl-tRNA synthetase [Escherichia coli IAI1]
 gi|254783601|sp|B7M0J4|SYY_ECO8A RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218360973|emb|CAQ98546.1| tyrosyl-tRNA synthetase [Escherichia coli IAI1]
          Length = 424

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINTLEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|170758393|ref|YP_001788639.1| tyrosyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|254783589|sp|B1L203|SYY_CLOBM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169405382|gb|ACA53793.1| tyrosine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 407

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 177/413 (42%), Positives = 265/413 (64%), Gaps = 8/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MSNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +      A+
Sbjct: 61  KAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEYNCNCFKKQLAKIIDFSED--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 MVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA
Sbjct: 177 LELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAK+++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKRVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           E+T ++HG EEA+KA  AA   F  ++    +MPT  I KD+++    L+ L+ K     
Sbjct: 297 EVTKLIHGEEEAQKAKVAAEALFGGNVKDLGNMPTAYIDKDDLNN--SLVDLLAKCEILP 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR +K   + +N+  +++  L +  +     G I +  GKKN     +
Sbjct: 355 SKSEARRLIKQGGLYVNDEKVTDINLVLTEEHVTEDG-IMIRRGKKNFNRIVV 406


>gi|297717908|gb|ADI50097.1| hypothetical protein [Candidatus Odyssella thessalonicensis L13]
          Length = 417

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 201/415 (48%), Positives = 275/415 (66%), Gaps = 2/415 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+FL IL  RGFIHQ ++   LD L +   +TAYIG+D TA+SLH G L Q+M+L WL
Sbjct: 1   MKSEFLQILKSRGFIHQATDMEALDNLANSQSITAYIGFDATANSLHVGSLVQIMMLRWL 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+P+ LMGGGTS+IGDP+ RD++R ++    IQ NI  I  +F  F+ + +G   A
Sbjct: 61  QKCGHRPLVLMGGGTSMIGDPTGRDDARNLLMDDAIQHNIAGISRVFKKFLNFSSGANAA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  I YI  LR+ G  FSVNRML+F+SV+ RL+REQ LSFLEFNYMILQAYD
Sbjct: 121 LMLNNADWLGEINYIGFLRDFGRHFSVNRMLTFDSVKLRLEREQPLSFLEFNYMILQAYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ G++L  R+   +++ LTSPL+T +SG KMGKT +G
Sbjct: 181 FLELNRRYGCVLQMGGSDQWGNIVNGVELTRRVIGKEVYGLTSPLITNSSGAKMGKTANG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +    Y++WQ+WRN +DADV  + +  T L +SEI+++ +LQG EIN AKK++A
Sbjct: 241 AVWLNADRLPAYDYWQFWRNTEDADVGRYLRLFTELELSEIEKLEQLQGSEINHAKKVLA 300

Query: 304 TEITTMVHGRE--EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
              TT+ HG E      A    +     S     +P I IS+ E   G+ +L + V+   
Sbjct: 301 DAATTLAHGAEVLPQIHATITQLFEQGNSGDLSSLPAIEISQAEFENGLPILEVFVQLNL 360

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A S  EARR ++ N  KIN++ +++  L +     ++ G +KLS GKK H +  +
Sbjct: 361 AASKGEARRLIQGNGAKINDAALTDPNLTVTSSHLNADGMVKLSAGKKRHGVVKI 415


>gi|207857047|ref|YP_002243698.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|254783629|sp|B5QV10|SYY_SALEP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|206708850|emb|CAR33180.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 424

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 232/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG V  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPVALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 364 VDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|82777111|ref|YP_403460.1| tyrosyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|97201960|sp|Q32FD6|SYY_SHIDS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81241259|gb|ABB61969.1| tyrosine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 424

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 236/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF+EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFIEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|15893925|ref|NP_347274.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81531026|sp|Q97LC5|SYY1_CLOAB RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|15023510|gb|AAK78614.1|AE007579_4 Tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508052|gb|ADZ19688.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 407

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 175/414 (42%), Positives = 263/414 (63%), Gaps = 7/414 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+ L  L ERG+  Q ++  E   L S+  VT YIG+D T  SLH GH   LML+  +Q
Sbjct: 1   MSNVLDELIERGYAKQFTHEEETRKLLSEEKVTFYIGFDPTGDSLHVGHFIALMLMARMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI L+GGGT+++GDP+ + + R+M+  +EI  N+E +K   S FI +      A+
Sbjct: 61  KAGHRPIVLIGGGTAMVGDPTGKTDMRKMLTREEINHNVECLKKQMSRFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL    YI+ LRE+G  FSVN+ML+ E  + R+  E+ LSFLEFNYM++Q +DF
Sbjct: 119 IVNNAEWLMGQNYIEFLREVGVHFSVNKMLTAECFKQRM--EKGLSFLEFNYMLMQGFDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L + YDC++++GG DQW N+I G++L  R    K +A+TS LLT + G KMGKT  GA
Sbjct: 177 YKLNEKYDCKMELGGDDQWSNMIAGVELIRRKSNKKAYAMTSALLTNSEGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY+F+QYWRN++DADV      LT LPM E+ R+A L+ +EIN+AK+++A 
Sbjct: 237 LWLDAEKTSPYDFFQYWRNVNDADVEKCLSMLTFLPMDEVRRLASLKDQEINKAKEVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA+KA  ++   F    +  ++PT+SI +D +S    +L ++V      S
Sbjct: 297 EVTKLVHGEEEAKKALNSSKALFGGGTNMDNVPTVSIPEDMLSS--SILDVLVHTKIIPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             E RR ++   I +N++ + +   +I  +DF+  G   +  GKK +    + G
Sbjct: 355 KGEGRRLVQQGGITLNDTKVEDFNYEITKEDFNDDGFALVRRGKKKYYKI-VIG 407


>gi|30063152|ref|NP_837323.1| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|194434313|ref|ZP_03066578.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|30041401|gb|AAP17130.1| tyrosine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|194417461|gb|EDX33565.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|281601071|gb|ADA74055.1| putative Tyrosyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313648912|gb|EFS13349.1| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|320181340|gb|EFW56259.1| tyrosyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332094002|gb|EGI99055.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332757144|gb|EGJ87484.1| tyrosyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332758119|gb|EGJ88444.1| tyrosyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332758468|gb|EGJ88789.1| tyrosyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332767038|gb|EGJ97237.1| tyrosyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333003899|gb|EGK23434.1| tyrosyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333005293|gb|EGK24813.1| tyrosyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333005870|gb|EGK25386.1| tyrosyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018021|gb|EGK37326.1| tyrosyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333018887|gb|EGK38180.1| tyrosyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 424

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 157/418 (37%), Positives = 236/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|324006993|gb|EGB76212.1| tyrosyl-tRNA synthetase [Escherichia coli MS 57-2]
          Length = 428

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 236/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQHGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|300939046|ref|ZP_07153740.1| tyrosyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300456035|gb|EFK19528.1| tyrosyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 428

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 236/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A +++ +VHG E  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVSRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|293446013|ref|ZP_06662435.1| tyrosyl-tRNA synthetase [Escherichia coli B088]
 gi|309793403|ref|ZP_07687830.1| tyrosyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|291322843|gb|EFE62271.1| tyrosyl-tRNA synthetase [Escherichia coli B088]
 gi|308122990|gb|EFO60252.1| tyrosyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 428

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 158/425 (37%), Positives = 237/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|152970527|ref|YP_001335636.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|262044618|ref|ZP_06017673.1| tyrosine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330015707|ref|ZP_08308230.1| tyrosine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|189083656|sp|A6T9Y5|SYY_KLEP7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|150955376|gb|ABR77406.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|259038019|gb|EEW39235.1| tyrosine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328531176|gb|EGF58025.1| tyrosine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 428

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 234/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MENLMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GDNSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  E A       F+ ++        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             LL  +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKK
Sbjct: 361 ADLLQALVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLV 425


>gi|195939027|ref|ZP_03084409.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
          Length = 428

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 157/425 (36%), Positives = 235/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRG 349
             A+ ++A ++T +VHG E  + A       F  S+ +             +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLVQDGLPMVEIEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQAMVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|193064961|ref|ZP_03046037.1| tyrosyl-tRNA synthetase [Escherichia coli E22]
 gi|192927448|gb|EDV82066.1| tyrosyl-tRNA synthetase [Escherichia coli E22]
          Length = 424

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|167646543|ref|YP_001684206.1| tyrosyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083645|sp|B0SXC3|SYY_CAUSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|167348973|gb|ABZ71708.1| tyrosyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 419

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 203/413 (49%), Positives = 278/413 (67%), Gaps = 1/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +FKS+FL  L  RG+IHQI++P ELD   + G+VTAYIG+D TA SLH G L Q+M+L  
Sbjct: 6   SFKSEFLQTLQARGYIHQITHPDELDAAAAGGIVTAYIGFDATAPSLHVGSLIQIMMLRR 65

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +I  NI  IK +F+ F+ +G G TD
Sbjct: 66  LQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIAANIAGIKQVFAKFLTFGDGPTD 125

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N+ WL    Y+  LR+ G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA 
Sbjct: 126 AIMVDNDVWLSKFGYVQFLRDYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQAV 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT+S
Sbjct: 186 DFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDHKAAFGLTTPLLATASGAKMGKTMS 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ EI R+  L G +IN+AKK++
Sbjct: 246 GAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDEIARLEALPGAQINDAKKVL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T M HG +EA KA  AA + F+    S  +PT  I+  E+  G+ L  L   AG A
Sbjct: 306 ADEATRMAHGEDEARKARDAAEKAFEQGALSADLPTFEIAAAELKAGIVLANLFADAGLA 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S  EARR  +   +K+N+    +    +   D      +KL+ GKK  ++  
Sbjct: 366 ASRGEARRLAQGGGVKVNDKAEPDANRVVTEADLVEG-VVKLAAGKKKIVLVK 417


>gi|168771181|ref|ZP_02796188.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189360026|gb|EDU78445.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
          Length = 424

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCVI 421


>gi|163759545|ref|ZP_02166630.1| tyrosyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283142|gb|EDQ33428.1| tyrosyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 417

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 231/415 (55%), Positives = 307/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A+KSDFL+IL+ERGFIHQ S+   LD L S+G    YIGYD TA SLH G+   +M+L
Sbjct: 1   MSAYKSDFLNILNERGFIHQCSDFEGLDTLASKGEAVGYIGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DE+R++   +EI  N + IK +FS  + +G G 
Sbjct: 61  YWLQQSGNKPIALMGGGTTMVGDPSGKDETRQLRTVEEIGANKDSIKQVFSRVLNFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  + YID+LR++G  FSVNRMLS +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 HDAIMVDNADWLLKLSYIDMLRDVGRHFSVNRMLSMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VELA+ Y C LQMGGSDQWGNI+ G++LG R+ T +L+ALT+PLLTTASG KMGKT
Sbjct: 181 SYDYVELARRYGCNLQMGGSDQWGNIVNGVELGRRMGTHQLYALTTPLLTTASGEKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S ++FWQYWRN +DADV  F KR T LPM EI R+  LQG EINEAKK
Sbjct: 241 ANGAVWLNADMFSAWDFWQYWRNAEDADVGRFLKRFTILPMDEIRRLEALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E T ++HGR  AE+AA  A + F+    S ++PTISI  DE+  G+GLL L V+AG
Sbjct: 301 VLANEATALLHGRAAAEEAAETARKTFEEGAISDNLPTISIPSDELQSGVGLLALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  AIK+N+  IS++K  +     +  G IKLS GKK H++  
Sbjct: 361 LAGSNGEARRHVQGGAIKLNDVAISDDKTLVNSGYLNDDGVIKLSLGKKKHVLVR 415


>gi|320174157|gb|EFW49322.1| tyrosyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 424

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQMTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWLNTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|255526011|ref|ZP_05392935.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296184759|ref|ZP_06853170.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255510271|gb|EET86587.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296050541|gb|EFG89964.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 406

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 184/412 (44%), Positives = 265/412 (64%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++    L ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MANVYDTLMERGYIKQVTHEEEVRDLLGKEKVTFYIGFDPTADSLHVGHFLQMMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N E  K  FS  + +      A+
Sbjct: 61  RAGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNAECFKNQFSVLVDFDND--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 MANNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ+GG DQW NII G DL  R ++   + +T  LLT + G KMGKT  GA
Sbjct: 177 LELNRRYGCVLQLGGDDQWSNIIAGADLIRRKESKPAYGMTFALLTNSEGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLNKE TSPY F+QYWRN+ D+DV      LT LPM E+ R+  LQ  EINEAKK++A 
Sbjct: 237 LWLNKEKTSPYEFYQYWRNVADSDVEKCLALLTFLPMDEVRRLGLLQDAEINEAKKVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG+EEAEKA  AA   F      +++PT+ I++DE+  G  ++ LIV      S
Sbjct: 297 EVTKIVHGKEEAEKAKAAAEALFAGGASMENVPTVEITEDEL--GCTVIDLIVNTKILPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +EARR ++   + IN+  I++  + I   +F +  ++ +  GKKN+    +
Sbjct: 355 KSEARRLVQQGGLTINDEKITDANMVITKANF-NDKSMLIRRGKKNYNRIVI 405


>gi|332090773|gb|EGI95865.1| tyrosyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 424

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  D DV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADVDVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|115524978|ref|YP_781889.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518925|gb|ABJ06909.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 418

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 226/416 (54%), Positives = 307/416 (73%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL  RGFIHQIS+P  LD L ++G   AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFLNILQSRGFIHQISDPDSLDALAAKGDAVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N + IKG F+  I +G GK
Sbjct: 61  HWLQQTGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKDSIKGTFAKMITFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 ADAIMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYGCNLQMGGSDQWGNIVNGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y++WQYWRN +DADV  F K  T L M E+ R+AKLQG EIN+AKK
Sbjct: 241 AAGAVWLNADMLSAYDYWQYWRNTEDADVERFLKLFTLLSMDEVARLAKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++ATE T ++HGRE AEKA   A   F+    +Q +P++ ++K E+  G+G+L    + +
Sbjct: 301 VLATEATALMHGREAAEKAEATARTTFEQGGTAQDLPSVEVTKAELDAGIGVLAAFAEKS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G   S  EARR +K+  +++N+  +++EK+ +   D  + G IKLSFGKK H++  
Sbjct: 361 GLVASNGEARRQIKAGGLRVNDVAVTDEKMALTAADLSADGVIKLSFGKKKHVLLR 416


>gi|288935193|ref|YP_003439252.1| tyrosyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288889902|gb|ADC58220.1| tyrosyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 424

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 233/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  +
Sbjct: 304 AEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKKNYCLV 421


>gi|200389646|ref|ZP_03216257.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602091|gb|EDZ00637.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 424

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 231/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR+ + SNA+ IN     + +     +D        L  GKKN+ + 
Sbjct: 364 VDAELQPSRGQARKTIASNAVTINGEKQPDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|283833254|ref|ZP_06352995.1| tyrosine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070890|gb|EFE08999.1| tyrosine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 428

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 232/425 (54%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GDNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E    A       F+ ++        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQESDILFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|158425243|ref|YP_001526535.1| tyrosyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158332132|dbj|BAF89617.1| tyrosyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 437

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 221/435 (50%), Positives = 293/435 (67%), Gaps = 20/435 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +SDFL  L ERG+IHQ S+   LD   S+G +TAYIG+D TASSLHAGHL  +M+L
Sbjct: 1   MTTLRSDFLRTLQERGYIHQCSDLERLDAKASEGPITAYIGFDATASSLHAGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+TGH+PI+LMGGGT+ IGDPS +DE+R+M+   +I ENI  I+ +F+ F+ +    
Sbjct: 61  RTLQRTGHRPIALMGGGTTKIGDPSGKDEARKMLTDAQINENIASIRKVFARFLDFEGSP 120

Query: 121 T--------------------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                                 A+M NN  WL  +KYI LLRE+G  F++NRML+F+SV+
Sbjct: 121 KGYARFARAVDGKWNEEPRLLPAIMENNANWLDELKYIPLLREVGPHFTINRMLTFDSVK 180

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            RL+REQ L+FLEFNYMILQAYDFVEL K + C LQMGGSDQWGNI+ G++LG R+    
Sbjct: 181 LRLEREQPLTFLEFNYMILQAYDFVELNKRHGCTLQMGGSDQWGNIVNGMELGRRMHGAD 240

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
           LFALT+PLLTT+SG KMGKT  GA+WL+  + SPY +WQYWRN  DADV  F K  T LP
Sbjct: 241 LFALTTPLLTTSSGAKMGKTAGGAVWLDAALLSPYEYWQYWRNTGDADVERFLKLFTELP 300

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           + EI R+A L G+EIN AK ++ATE T ++HGR  AE+A   A   F+    S ++PTI 
Sbjct: 301 LDEIARLAALGGQEINHAKDVLATEATALLHGRAAAEEAKATARATFEEGALSTNLPTIE 360

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I   ++  G+   +  V AG   ST+EARR +KS  +K+N++ +++EKL +  +D  + G
Sbjct: 361 IPAADLKAGLAANSAFVTAGLVPSTSEARRQIKSGGLKVNDATVTDEKLVLGERDLTAEG 420

Query: 401 NIKLSFGKKNHIICH 415
            IKLS GKK H++  
Sbjct: 421 VIKLSMGKKKHVLVR 435


>gi|300930899|ref|ZP_07146266.1| tyrosyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300461259|gb|EFK24752.1| tyrosyl-tRNA synthetase [Escherichia coli MS 187-1]
          Length = 428

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 236/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K ++        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|194436502|ref|ZP_03068603.1| tyrosyl-tRNA synthetase [Escherichia coli 101-1]
 gi|253773404|ref|YP_003036235.1| tyrosyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161699|ref|YP_003044807.1| tyrosyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|194424534|gb|EDX40520.1| tyrosyl-tRNA synthetase [Escherichia coli 101-1]
 gi|242377368|emb|CAQ32114.1| tyrosyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324448|gb|ACT29050.1| tyrosyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973600|gb|ACT39271.1| tyrosyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977795|gb|ACT43465.1| tyrosyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|323962130|gb|EGB57725.1| tyrosyl-tRNA synthetase [Escherichia coli H489]
 gi|323973982|gb|EGB69154.1| tyrosyl-tRNA synthetase [Escherichia coli TA007]
          Length = 424

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K ++        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFTLLRRGKKNYCLI 421


>gi|92117855|ref|YP_577584.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800749|gb|ABE63124.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 418

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 226/416 (54%), Positives = 305/416 (73%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MAAFKSDFLNILQERGFIHQCSDVEGLDALAAKGQATAYVGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DESR +    EI+ N   I+G+F+  + YG+G 
Sbjct: 61  YWLQQSGNKPITLMGGGTTMVGDPSGKDESRAIRSVAEIEANKASIRGVFAKVLHYGSGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 NDAVMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G+DLG R+ TP+LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRVGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN++DADVV F K  T LPM EI ++A L+  EINEAKK
Sbjct: 241 AQGAVWLNADAFSPYDFWQYWRNVEDADVVRFLKLFTILPMDEIAKLAALRDAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++ATE T ++HGR+EAEKAA  A   F+    ++ +PT+ I   E+ +G+G+L    + A
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGAIAESLPTVDIPHSELKKGIGVLVAFSERA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               S  EARR +KS  +++N+  +++EK+ +        G IKLS GKK H++  
Sbjct: 361 RLVASNGEARRQIKSGGLRVNDVAVTDEKMMLTSDHLTPEGVIKLSMGKKRHVLLR 416


>gi|237705581|ref|ZP_04536062.1| tyrosyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|226900338|gb|EEH86597.1| tyrosyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|315286333|gb|EFU45769.1| tyrosyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 428

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 236/425 (55%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG +  + A       F  S+        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGCFTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|156934169|ref|YP_001438085.1| tyrosyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|189083654|sp|A7MMK1|SYY_ENTS8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|156532423|gb|ABU77249.1| hypothetical protein ESA_01996 [Cronobacter sakazakii ATCC BAA-894]
          Length = 428

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 231/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAQRLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKATERKLNTEDTVQEWVDKIRRQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIDEINALEEEDKNSGKAPRAQYVL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F+ +++       + +    +   E+ +G  L+  +
Sbjct: 308 AEQVTRLVHGEEGLAAAKRITESLFNGNLNALSEADFEQLAQNGVPMIEMEKGADLMQAL 367

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 368 VDSELQPSRGQARKTIASNAITINGEKQSDPEYTFSDSDRLFGRYTLLRRGKKNYCLV 425


>gi|320197821|gb|EFW72429.1| tyrosyl-tRNA synthetase [Escherichia coli EC4100B]
          Length = 424

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALVERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   ++ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVKMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|298291329|ref|YP_003693268.1| tyrosyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296927840|gb|ADH88649.1| tyrosyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 423

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 233/421 (55%), Positives = 303/421 (71%), Gaps = 6/421 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL  L ERGFIHQIS+ + LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSKFRSDFLRTLDERGFIHQISDEQGLDDLFAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P+SLMGGGT ++GDPSF+DE+R++M    I+ NI  I+ +FS+++ YG   
Sbjct: 61  HWLQQTGHRPVSLMGGGTGMVGDPSFKDEARQLMTVDTIEANIASIRRVFSNYLSYGDSN 120

Query: 121 -----TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                  ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFN
Sbjct: 121 HGDSLRGALMINNAEWLRELNYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFN 180

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           YMILQAYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ +P+L+ALTSPLLTTASG 
Sbjct: 181 YMILQAYDFVELNKRYGVRLQMGGSDQWGNIVNGIDLGHRMGSPQLYALTSPLLTTASGA 240

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KMGKTL GA+WLN ++  PY FWQYWRN +DADV  F K  TTLPM+EI R++ L G E+
Sbjct: 241 KMGKTLGGAVWLNADLLGPYEFWQYWRNTEDADVPRFLKLYTTLPMAEIARLSALGGAEL 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           NE KKI+ATE+T M+HGR  AE AA  A + F+    S  +PT+ +   E+  G+G+L  
Sbjct: 301 NEVKKILATEVTAMLHGRAAAEAAAETARKTFEEGGLSADLPTVEVPAGELEAGIGVLAA 360

Query: 356 IVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +  G   S  EARR +K   +K+N++ +++EK  +  +D    G +KLS GKK H++ 
Sbjct: 361 FAEKTGLVASNGEARRQIKGGGLKVNDATVTDEKAVLTARDLTPEGVVKLSLGKKKHVLL 420

Query: 415 H 415
            
Sbjct: 421 R 421


>gi|323956648|gb|EGB52385.1| tyrosyl-tRNA synthetase [Escherichia coli H263]
          Length = 424

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 235/418 (56%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG +  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGCFTLLRRGKKNYCLI 421


>gi|237731399|ref|ZP_04561880.1| tyrosyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906938|gb|EEH92856.1| tyrosyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 428

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 232/425 (54%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GDNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E    A       F+ ++        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMDKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQDSDILFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|153953394|ref|YP_001394159.1| tyrosyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219854023|ref|YP_002471145.1| hypothetical protein CKR_0680 [Clostridium kluyveri NBRC 12016]
 gi|254783590|sp|B9DZQ6|SYY_CLOK1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783591|sp|A5N680|SYY_CLOK5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146346275|gb|EDK32811.1| TyrS1 [Clostridium kluyveri DSM 555]
 gi|219567747|dbj|BAH05731.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 406

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 181/412 (43%), Positives = 264/412 (64%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++   IL ERG+I QI++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MANVYDILLERGYIKQITHEDEVRELLGKEKVTFYIGFDPTADSLHIGHFLQMMVMSHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GHKPI+L+GGGT++IGDP+ + + R+M+  ++IQ N +  K  FS FI +      A+
Sbjct: 61  KAGHKPIALLGGGTAMIGDPTGKTDMRKMLSREQIQHNADCFKKQFSKFIDF--EDEKAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  WL ++ Y++ LREIG  FSVN+ML+ E  + R+  E+ L+FLEFNYM++Q YDF
Sbjct: 119 MANNADWLMNLNYVNFLREIGVHFSVNKMLTAECFKQRM--EKGLTFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C  QMGG DQW NII G++L  + +    F +T  LLT + G KMGKT  GA
Sbjct: 177 LELNRRYGCTFQMGGDDQWANIIAGVNLIRKKERKPAFGMTFTLLTKSDGKKMGKTEGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+KE TSPY+F+QYWRN+DDADV      LT LPM E+ R++ L G++INEAKK++A 
Sbjct: 237 IWLDKEKTSPYDFYQYWRNVDDADVEKCLLLLTFLPMDEVKRLSSLPGEKINEAKKVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG +EA+ A  AA   F       ++PTI + +  +  G  ++ L+V      S
Sbjct: 297 EVTKIIHGEKEAQMAKEAAEALFSGGESLNNVPTIELDESSL--GCSVVELLVDIHILPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +EARR +K N + IN   +++ +L++    F   G + +  GKKN+    +
Sbjct: 355 KSEARRLIKQNGLTINGEKVTDSELKVTKDHF-KNGELLIRRGKKNYNRIII 405


>gi|283785148|ref|YP_003365013.1| tyrosyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948602|emb|CBG88193.1| tyrosyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 424

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 232/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F+           + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLAAAKRITESLFNGTLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYIFVDDDRLYGRYTLLRRGKKNYCLV 421


>gi|168182052|ref|ZP_02616716.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796763|ref|YP_002864315.1| tyrosyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259516967|sp|C3KUT7|SYY_CLOB6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182674819|gb|EDT86780.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263527|gb|ACQ54560.1| tyrosine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 407

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 176/413 (42%), Positives = 263/413 (63%), Gaps = 8/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MINVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +      A+
Sbjct: 61  KAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEYNCNCFKKQLAKIIDFSED--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 MVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA
Sbjct: 177 LELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAK+++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKRVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           E+T ++HG EEA+KA  AA   F  +     +MPT  I KD+++    L+ L+ K     
Sbjct: 297 EVTKLIHGEEEAQKAKVAAEALFGGNAKDLGNMPTAYIDKDDLNN--PLVDLLAKCEILP 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR +K   + +N+  +++  L +  +     G I +  GKKN     +
Sbjct: 355 SKSEARRLIKQGGLYVNDEKVTDINLVLTEEHVTEDG-IMIRRGKKNFNRIVV 406


>gi|227328527|ref|ZP_03832551.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 425

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 226/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTAETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +D LR+IG  FSVN+M+S E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID          +   A+ ++
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG    E A       F              +    +   E+  G  L   +
Sbjct: 304 AEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENGADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 364 VSAELVPSRGQARTMIASNAVTINGEKQADPEYTFSDSDRLFDRYTLLRRGKKHYCLI 421


>gi|222086109|ref|YP_002544641.1| tyrosyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|221723557|gb|ACM26713.1| tyrosyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 410

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 238/407 (58%), Positives = 308/407 (75%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L ERGFIHQIS+   LD L ++  VTAYIG+D TA SLH G L Q+M+L WLQ TGH
Sbjct: 1   MRTLQERGFIHQISDEAGLDDLFAKETVTAYIGFDPTAPSLHVGSLMQIMMLHWLQATGH 60

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + +SLMGGGT ++GDPSF+DE+R++M    I+ NI  IK +FSS++ YG G  DALM+NN
Sbjct: 61  RAVSLMGGGTGMVGDPSFKDEARQLMTVDTIESNIASIKRVFSSYLTYGDGPKDALMINN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQAYDFVELA
Sbjct: 121 AEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQAYDFVELA 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K YDCRLQ+GGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+ SGA+WLN
Sbjct: 181 KRYDCRLQIGGSDQWGNIVNGIDLGHRMGTKQLYALTSPLLTTSSGAKMGKSASGAVWLN 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            ++ S Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KKI+ATE+T 
Sbjct: 241 SDLLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIARLSALAGSELNEVKKILATEVTA 300

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HGRE AE AA  A + F+    S+++P++ +   E+  G+GLL+LIV+AG A S  EA
Sbjct: 301 ILHGREAAELAAETARKTFEEGGLSENLPSVEVPASELDAGIGLLSLIVRAGLAASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 RRHVQGGAVRINDQAVSDERKLIGSGEITADGVIKLSLGKKKHILVR 407


>gi|157145898|ref|YP_001453217.1| tyrosyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|189083646|sp|A8AH18|SYY_CITK8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157083103|gb|ABV12781.1| hypothetical protein CKO_01649 [Citrobacter koseri ATCC BAA-895]
          Length = 428

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 233/425 (54%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GDNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVTLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E    A       F+ ++        + +    +   E+ +G
Sbjct: 301 PRAQYVLAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQDSDILFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLI 425


>gi|194426117|ref|ZP_03058673.1| tyrosyl-tRNA synthetase [Escherichia coli B171]
 gi|194416172|gb|EDX32438.1| tyrosyl-tRNA synthetase [Escherichia coli B171]
          Length = 424

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 233/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +    + ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRVQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AELVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|260597789|ref|YP_003210360.1| tyrosyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216966|emb|CBA30602.1| Tyrosyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 424

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 150/418 (35%), Positives = 231/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAQRLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTEDTVQEWVDKIRRQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNELHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLDEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F+ +++       + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLAAAKRITESLFNGNLNALSEADFEQLAQDGVPMIEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQADPEYTFSDSDRLFGRYTLLRRGKKNYCLV 421


>gi|160934286|ref|ZP_02081673.1| hypothetical protein CLOLEP_03157 [Clostridium leptum DSM 753]
 gi|156866959|gb|EDO60331.1| hypothetical protein CLOLEP_03157 [Clostridium leptum DSM 753]
          Length = 413

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 179/418 (42%), Positives = 257/418 (61%), Gaps = 6/418 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M          L  RG I Q++N  ++  L + G  + YIG+D TA SLH GH  Q+M++
Sbjct: 1   MEELIMGVYDELKARGLIAQLTNEEKVRDLLNNGKTSFYIGFDPTADSLHVGHFVQIMVM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH PI+L GGGT +IGDPS +   RRMM  +EI  N+   +   S  + +  G 
Sbjct: 61  AHMQKAGHTPIALFGGGTGMIGDPSGKTAMRRMMTREEIDHNVRCFQKQMSRLVDFSDG- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+M+NN  WL ++ YI  LRE+G  FSVNRMLSFE  + RL  E+ LSF E NYM++Q
Sbjct: 120 -KAIMVNNADWLMNLNYIQFLREVGVHFSVNRMLSFECYKQRL--ERGLSFFELNYMLMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF+ L + Y C+L++GG DQW NII G++L  +    + + +T  LLTT+ G KMGKT
Sbjct: 177 SYDFLVLNRKYGCQLELGGDDQWSNIIGGVELIRKADDKEAYGMTFTLLTTSDGRKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+ E TSPY+F+QYWRN+DDADV+   K LT LP+ EI+ MAK +G ++N+AK+
Sbjct: 237 ESGAVWLDPEKTSPYDFYQYWRNVDDADVIRCLKILTFLPLEEIEAMAKWEGSQLNKAKE 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKA 359
           I+A E+T ++HG EEA KA  AA   F    HS++MP+  +S  + + G + +L L+ K 
Sbjct: 297 ILAFEVTKLIHGEEEAVKAQNAARAIFGGGAHSENMPSTELSDGDFTDGEISVLDLLAKT 356

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               S  EARR +    I I++  +++   +I    F+    + +  GKK +    L 
Sbjct: 357 KLVPSKGEARRLIDQGGISIDDEKVNSVTAKISKSSFEKG-FVIIKKGKKVYHKAILS 413


>gi|288549573|ref|ZP_05967462.2| tyrosine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288318425|gb|EFC57363.1| tyrosine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 428

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 227/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MENLMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQMAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFNC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GDNAAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + +  I+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEAINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRG 349
             A+ ++A E+T +VHG E    A       F+           + +    +   E+ +G
Sbjct: 301 PRAQYVLADEVTKLVHGEEGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKK
Sbjct: 361 ADLMQALVDSELQPSRGQARKTIASNAITINGEKQADPEYTFVEGDRLYGRYTLLRRGKK 420

Query: 410 NHIIC 414
           N+ + 
Sbjct: 421 NYCLV 425


>gi|168264629|ref|ZP_02686602.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205346947|gb|EDZ33578.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 424

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 231/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TS Y F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSLYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 364 VDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|169335722|ref|ZP_02862915.1| hypothetical protein ANASTE_02142 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258460|gb|EDS72426.1| hypothetical protein ANASTE_02142 [Anaerofustis stercorihominis DSM
           17244]
          Length = 407

 Score =  391 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 184/410 (44%), Positives = 259/410 (63%), Gaps = 5/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VYEELVKRGLIAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R+MM  + I EN E+ K   S FI +  G   ALM+N
Sbjct: 63  NKPIALVGGGTGMIGDPSGRTDLRQMMTVETINENCERFKEQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID +R+IGS FSVNRML+FE  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLRDLNYIDFIRDIGSHFSVNRMLTFECYKQRM--EKGLSFLEFNYMIMQSYDFYRL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YKDYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTASGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ D DV+   K LT LP+ EI++M K +G E+N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDEDVIKCLKMLTFLPLEEIEKMEKWEGSELNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG +EA+KA  AA   F      ++MP+  I K E++ G+ LL L++KA    S +E
Sbjct: 299 ELVHGEDEADKAKEAASALFKGKGSKENMPSTDIEKSEINDGISLLDLMLKAELIPSKSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            RR +K   + +++  I++    I L+DF     I +  GKK +   ++ 
Sbjct: 359 GRRLVKQGGVSVDDIKITDVNKMITLEDF-KENEIIIKKGKKVYHKINIV 407


>gi|295689547|ref|YP_003593240.1| tyrosyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431450|gb|ADG10622.1| tyrosyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 419

 Score =  391 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 205/414 (49%), Positives = 278/414 (67%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +FKS+FL  L  RG+IHQI++P ELD   S G+VTAYIG+D TA SLH G L Q+MLL 
Sbjct: 5   SSFKSEFLRTLEARGYIHQITHPEELDAAASAGIVTAYIGFDATAPSLHVGSLIQIMLLR 64

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +F+ F+ +G G T
Sbjct: 65  RLQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKQVFAKFLTFGDGPT 124

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA
Sbjct: 125 DAIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQA 184

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT 
Sbjct: 185 VDFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTA 244

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ +I  +  L+G +INEAKK+
Sbjct: 245 AGAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLEKIAELEALEGAQINEAKKV 304

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M HG EEA KA  AA + F+    S  +PT  +   ++  G+ L  L   AG 
Sbjct: 305 LADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTFEVPAADLEAGIVLAALFTDAGL 364

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A S  EARR  +   +K+N+   ++    I   D      +KL+ GKK  ++  
Sbjct: 365 AGSRGEARRLAQGGGLKVNDKAEADANRTITSADLVEG-VVKLAAGKKKIVLVK 417


>gi|238895018|ref|YP_002919752.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238547334|dbj|BAH63685.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 424

 Score =  391 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 232/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIVEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  +
Sbjct: 304 AEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTVASNAVTINGEKQADPEYVFADSDRLFGRYTLLRRGKKNYCLV 421


>gi|85716320|ref|ZP_01047293.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696836|gb|EAQ34721.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 418

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 227/416 (54%), Positives = 304/416 (73%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MSAFKSDFLNILQERGFIHQCSDFAGLDALAAKGEATAYVGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DESR +    EI+ N   I+G+F   ++YG+G 
Sbjct: 61  YWLQQSGNKPITLMGGGTTMVGDPSGKDESRAIRSVAEIEANKASIRGVFDKVLRYGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+ML+N  WL  + +I+ LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 NDAVMLDNAEWLTKLNWIETLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G+DLG R+ TP+LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRVGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN++DADV  F K  T LPMSEI ++A L+  EINEAKK
Sbjct: 241 AQGAVWLNADAFSPYDFWQYWRNVEDADVGRFLKLFTILPMSEIAKLAALRDAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++ATE T ++HGR+EAEKAA  A   F+    ++ +PT+ I  DE+ RG+G+L    + A
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGSIAESLPTVDIKHDELERGIGVLVAFSERA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               S  EARR +K   +++N+  +++EK+ +        G IKLS GKK H++  
Sbjct: 361 RLVASNGEARRQIKGGGLRVNDVAVADEKMILTPDHLTPEGVIKLSMGKKRHVLLR 416


>gi|311279500|ref|YP_003941731.1| tyrosyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748695|gb|ADO48447.1| tyrosyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 424

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E    A       F+           + +    +   E+ +G  L+  +
Sbjct: 304 ADQVTRLVHGEEGLAAAKRITESLFNGTLSSLSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYAFVDGDRLYGRYTLLRRGKKNYCLI 421


>gi|253688754|ref|YP_003017944.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259517008|sp|C6DK25|SYY_PECCP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|251755332|gb|ACT13408.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 425

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 223/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTADTVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +D LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLDFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID          +   A+ ++
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG    E A       F              +    +   E+  G  L   +
Sbjct: 304 AEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENGADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 364 VSAELVPSRGQARTMISSNAVTINGEKQADPEYTFSASDRLFDRYTLLRRGKKHYCLI 421


>gi|227111805|ref|ZP_03825461.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 425

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 225/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTAETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +D LR+IG  FSVN+M+S E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID          +   A+ ++
Sbjct: 244 IWLDASKTSPYKFYQFWVNTADADVYRFLKFFTFMSLEDIDALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG    E A       F              +    +   E+  G  L   +
Sbjct: 304 AEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENGADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 364 VSAELVPSRGQARTMISSNAVTINGEKQADPEYTFSDADRLFDRYTLLRRGKKHYCLI 421


>gi|269139039|ref|YP_003295740.1| tyrosyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984700|gb|ACY84529.1| tyrosyl-tRNA synthetase [Edwardsiella tarda EIB202]
          Length = 424

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 148/418 (35%), Positives = 225/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTEETVQSWVDKIRRQVAPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEDEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG    E A       F  S+          +    +   E+ +G  L   +
Sbjct: 304 AEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGMPMVEMDKGADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR+ + SNA+ +N    S+ +      D        L  GKKN+ + 
Sbjct: 364 VDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFGRYTLLRRGKKNYCLI 421


>gi|46202551|ref|ZP_00053020.2| COG0162: Tyrosyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 415

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 289/415 (69%), Gaps = 2/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + KSDFL I++ERG++HQ ++   LD   ++G   AYIG+D TA+SLH G L Q+MLL
Sbjct: 1   MTSLKSDFLRIVTERGYMHQCTDLEALDKRLTEGCQAAYIGFDCTATSLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGHKPI LMGGGT+ IGDP+ +DESR+M+  + I  N+  IK +F+ ++ +G G+
Sbjct: 61  RWWQKTGHKPIVLMGGGTTRIGDPTGKDESRKMLTDEVIATNMAGIKTVFTKYLTFGDGQ 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + YID LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYM+LQ
Sbjct: 121 TDALMVNNADWLDKLNYIDFLRDYGHHFTINRMLTFDSVKLRLEREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL +   C LQMGGSDQWGNII G++LG R    +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFVELYRRNKCILQMGGSDQWGNIINGVELGRRADQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+ KL+G EINEAKK
Sbjct: 241 VNGAVWLNDDMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEKLEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG   A +AA  A + F+  + +  +PTI I   E++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGEAAAIQAAETARKTFEEGMAATDLPTIEIPAAELAAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR LK    K+N+  + +E   +   D    G +KL+ GKK HI+  
Sbjct: 361 LAASNGEARRLLKGGGGKVNDQAV-DEARPVGSADL-KDGAVKLTAGKKRHILVK 413


>gi|238787158|ref|ZP_04630958.1| Tyrosyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724946|gb|EEQ16586.1| Tyrosyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 428

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 157/425 (36%), Positives = 228/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHRPVALVGGATGMIGDPSFKANERKLNTEDTVNEWVEKIRRQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK 
Sbjct: 181 LLQAYDFACLNKAYGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + M EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRG 349
             A+ ++A  +T MVHG E    A       F  ++H         +    +   E+SR 
Sbjct: 301 PRAQYVLAENVTGMVHGAEGLAAAKRITDSLFSGNLHDMTEADFAQLAQDGMPTIELSRD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMINSNAVAINGEKQSDPEYTFTDADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|83312134|ref|YP_422398.1| tyrosyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|97201574|sp|Q2W2T6|SYY_MAGMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|82946975|dbj|BAE51839.1| Tyrosyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 415

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 288/415 (69%), Gaps = 2/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + KSDFL I++ERG++HQ ++   LD   ++G   AYIG+D TA+SLH G L Q+MLL
Sbjct: 1   MTSLKSDFLRIVTERGYMHQCTDLEALDKRLTEGCQAAYIGFDCTATSLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGHKPI LMGGGT+ IGDP+ +DESR+M+  + I  N+  IK +F+ ++ +G GK
Sbjct: 61  RWWQKTGHKPIVLMGGGTTRIGDPTGKDESRKMLTDEVIATNMAGIKTVFTKYLTFGEGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + YID LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYM+LQ
Sbjct: 121 TDALMVNNADWLDKLNYIDFLRDYGHHFTINRMLTFDSVKLRLEREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL +   C LQMGGSDQWGNII G++LG R    +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFVELFRRNRCILQMGGSDQWGNIINGVELGRRADQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+ KL+G EINEAKK
Sbjct: 241 VNGAVWLNDDMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEKLEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG   A +AA  A + F+  + S  +PT+ I   E++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGDAAALQAAETARQTFEQGVASSDLPTVEIPAAELAAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR LK    K+N+  + +E   +   D      +KL+ GKK HI+  
Sbjct: 361 LAASNGEARRLLKGGGGKVNDQAV-DEAHPVGSNDLRDGA-VKLTAGKKRHILVK 413


>gi|97201278|sp|Q891D3|SYY_CLOTE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 407

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 173/413 (41%), Positives = 268/413 (64%), Gaps = 7/413 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++   +L ERG+I Q ++  E+  L ++  +T YIG+D TA SLH GH   LM++  +
Sbjct: 1   MGNNVFDVLKERGYIKQTTHEEEIRDLINKDKITFYIGFDPTADSLHIGHFLPLMMMAHM 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI+L+GGGT  IGDPS + E R+M+  + I +N+  IK   S FI +      A
Sbjct: 61  QKAGHRPIALVGGGTVRIGDPSGKSEMRKMLSKEAIDKNVSSIKSQISRFIDFSDD--KA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++++N  WL ++ Y++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYD
Sbjct: 119 ILVDNADWLLNLNYLEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L + Y C +++GG DQW N++ G DL  R ++   +A+T  LLT + G KMGKT++G
Sbjct: 177 FLCLNRKYGCVMELGGDDQWSNMLAGTDLIRREESKSAYAMTCTLLTNSEGNKMGKTVNG 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+K+ TSPY F+QYWRN+DDADV      LT LPM E+ R+A L+G +INEAKK++A
Sbjct: 237 ALWLDKDKTSPYEFYQYWRNVDDADVEKCLALLTFLPMDEVRRLAALEGNKINEAKKVLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG +EA+KA  A+   F       ++PT++ISKD++ +G  +L ++V+     
Sbjct: 297 YEVTKLIHGEDEAKKAEEASEALFGAGKDMSNVPTVNISKDDLGKG--ILDILVETKILP 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EARR ++   + IN   +++  + +  +D     +I +  GKK++    +
Sbjct: 355 SKGEARRLIQQGGLSINEEKVTDINMAVT-EDLFEENSIIIRRGKKSYNRIVI 406


>gi|187776757|ref|ZP_02993230.1| hypothetical protein CLOSPO_00272 [Clostridium sporogenes ATCC
           15579]
 gi|187775416|gb|EDU39218.1| hypothetical protein CLOSPO_00272 [Clostridium sporogenes ATCC
           15579]
          Length = 407

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 180/413 (43%), Positives = 263/413 (63%), Gaps = 8/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MSNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDP+ + + R+MM   +I+ N    K   +  I +      A+
Sbjct: 61  KAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKDQIEHNCNCFKKQLAKIIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 MVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA
Sbjct: 177 LELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           E+T ++HG EEAEKA  AA   F  +     +MPT  I KD ++    L+ L+VK     
Sbjct: 297 EVTKLIHGEEEAEKAKVAAEALFGGNAKDLGNMPTAYIGKDHLNN--PLVDLLVKCEIFP 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR +K   + +N+  +++  L +  +     G I +  GKKN     +
Sbjct: 355 SKSEARRLIKQGGLYVNDEKVTDINLVVTEEHVTEDG-IMIRRGKKNFNRIVV 406


>gi|146311467|ref|YP_001176541.1| tyrosyl-tRNA synthetase [Enterobacter sp. 638]
 gi|189083653|sp|A4W9W0|SYY_ENT38 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145318343|gb|ABP60490.1| tyrosyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 424

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 150/418 (35%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQE 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  MGHKPIALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNELHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VH  +    A       F+           + +    +   E+ +G  L+  +
Sbjct: 304 ADLVTRLVHCEDGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQADPEYTFVDGDRLYGRYTLLRRGKKNYCLI 421


>gi|28212031|ref|NP_782975.1| tyrosyl-tRNA synthetase [Clostridium tetani E88]
 gi|28204474|gb|AAO36912.1| tyrosyl-tRNA synthetase [Clostridium tetani E88]
          Length = 412

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 173/414 (41%), Positives = 268/414 (64%), Gaps = 7/414 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
              ++   +L ERG+I Q ++  E+  L ++  +T YIG+D TA SLH GH   LM++  
Sbjct: 5   EMGNNVFDVLKERGYIKQTTHEEEIRDLINKDKITFYIGFDPTADSLHIGHFLPLMMMAH 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           +QK GH+PI+L+GGGT  IGDPS + E R+M+  + I +N+  IK   S FI +      
Sbjct: 65  MQKAGHRPIALVGGGTVRIGDPSGKSEMRKMLSKEAIDKNVSSIKSQISRFIDFSDD--K 122

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++++N  WL ++ Y++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAY
Sbjct: 123 AILVDNADWLLNLNYLEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L + Y C +++GG DQW N++ G DL  R ++   +A+T  LLT + G KMGKT++
Sbjct: 181 DFLCLNRKYGCVMELGGDDQWSNMLAGTDLIRREESKSAYAMTCTLLTNSEGNKMGKTVN 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+K+ TSPY F+QYWRN+DDADV      LT LPM E+ R+A L+G +INEAKK++
Sbjct: 241 GALWLDKDKTSPYEFYQYWRNVDDADVEKCLALLTFLPMDEVRRLAALEGNKINEAKKVL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+T ++HG +EA+KA  A+   F       ++PT++ISKD++ +G  +L ++V+    
Sbjct: 301 AYEVTKLIHGEDEAKKAEEASEALFGAGKDMSNVPTVNISKDDLGKG--ILDILVETKIL 358

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            S  EARR ++   + IN   +++  + +  +D     +I +  GKK++    +
Sbjct: 359 PSKGEARRLIQQGGLSINEEKVTDINMAVT-EDLFEENSIIIRRGKKSYNRIVI 411


>gi|261821918|ref|YP_003260024.1| tyrosyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605931|gb|ACX88417.1| tyrosyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 425

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 222/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  AGHQPVALVGGATGLIGDPSFKATERKLNTADTVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN+M+S E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID              A+ ++
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGTAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG    E A       F              +    +   E+     L   +
Sbjct: 304 AEEVTRMVHGESGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENSADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    +N +      D        L  GKK++ + 
Sbjct: 364 VSAELVPSRGQARTMIASNAVTINGEKQANPEYTFSAADRLFDRYTLLRRGKKHYCLI 421


>gi|242239132|ref|YP_002987313.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131189|gb|ACS85491.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 424

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 152/420 (36%), Positives = 225/420 (53%), Gaps = 9/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   
Sbjct: 1   MASNLIQQLQERGLVAQVTDEAALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP++L+GG T +IGDPSF+   R++   + + E ++KI+   + F+ +  G+  A
Sbjct: 61  QMAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVSEWVDKIRRQAAPFLDFDCGENSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
           +  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ Y
Sbjct: 121 VAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT S
Sbjct: 181 DFASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N  DADV  F K  T L +  I+              A+ 
Sbjct: 241 GAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFLDIDAINALEEEDKNSGTAPRAQS 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLT 354
           ++A E+T +VHG E    A       F+             +    +   E+ +G  L  
Sbjct: 301 VLAEEVTRLVHGEEGLVAARRITQSLFNGHLGELTEADFAQLAQDGVPMVELEKGADLQQ 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +  +   D        L  GKKN+ + 
Sbjct: 361 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYVLADSDRLFGRYTLLRRGKKNYCLV 420


>gi|85702960|ref|ZP_01034064.1| tyrosyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671888|gb|EAQ26745.1| tyrosyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 417

 Score =  389 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 215/414 (51%), Positives = 285/414 (68%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFLS++  RG++   ++ + LD   S G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLSVMMSRGYLADCTDYQGLDEALSAGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  +  +F+ ++ YG G  DAL
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLSPAQIDENIAGMNRVFARYLDYGEGPQDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNADWLDGLNYLEFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +E+ + + C LQMGGSDQWGNII GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LEINRRHGCLLQMGGSDQWGNIINGIDLTRRVIDHEVFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +M SPY FWQ+WRN  DAD   F K  T LP+ + DR+  L+G +IN AK I+A 
Sbjct: 246 VWLSADMLSPYEFWQFWRNTTDADTGRFLKLYTELPIEDCDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EITT++HG E A+ A   A E F+       +PTI ++  E++ G+ ++ LIV+AG A S
Sbjct: 306 EITTLLHGAEAAQAAEATAREVFEHGGVGDDLPTIEVTAQELAEGISIVQLIVRAGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  ++++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 GKEAKRLITENGARLDDEPLTDAGLMIDAGALKSP--IKLSAGKKRHALVKLEG 417


>gi|144898140|emb|CAM75004.1| tyrosyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 421

 Score =  389 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 286/415 (68%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S+FL +++ERG++HQ ++   LD   +QG   AYIG+D TA SLH G L Q+MLL
Sbjct: 6   MTTARSEFLRVVAERGYMHQCTDLEALDKRLNQGPAAAYIGFDCTAESLHVGGLMQIMLL 65

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTG+KPI LMGGGT+ IGDP+ +DE+R+M+    I  N+  IK +F+ ++ +G G 
Sbjct: 66  RWWQKTGNKPIVLMGGGTTRIGDPTGKDEARKMLDDAAIAHNMAGIKQVFAKYLTFGDGA 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 126 TDAMMVNNADWLDQLNYISFLRDYGKHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF EL   + C LQMGGSDQWGNII G++LG R+   +LF LTSPLLTT+SG KMGKT
Sbjct: 186 GYDFAELWSRHKCVLQMGGSDQWGNIINGVELGRRVHQAELFGLTSPLLTTSSGAKMGKT 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M S + FWQYWRN +DADV  F K  T LPM EI R+  LQG EINEAKK
Sbjct: 246 VGGAVWLNADMLSAWEFWQYWRNTEDADVGRFLKLYTELPMEEIARLEALQGAEINEAKK 305

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG E A +AA  A + F+    S ++PTI+I   +++ G+    L V+AG
Sbjct: 306 ILAHEVTKLCHGEESAREAAETARKTFEQGGVSDNLPTIAIPAADLNAGIPAFALFVRAG 365

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +TS  EARR L+    ++N++ +++    I   D    G IKL+ GKK +++  
Sbjct: 366 LSTSNGEARRLLQQGGGRVNDAQVTDPAAPIGA-DALKDGVIKLTAGKKRNVLVK 419


>gi|326204657|ref|ZP_08194513.1| tyrosyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325985224|gb|EGD46064.1| tyrosyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 408

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 170/413 (41%), Positives = 257/413 (62%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S    +L ERGFI QI++  E+  L S+  VT YIG+D TA SLH GH  QLM++  +Q
Sbjct: 1   MSSVFDVLKERGFIAQITHEEEVKKLLSEEKVTFYIGFDPTADSLHIGHFLQLMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+GGGT+++GDP+ +++ R+MM  + ++ N +  K   S FI +      A+
Sbjct: 61  QAGHVPIVLIGGGTAMVGDPTGKNDMRKMMTREIVKHNADSFKTQISKFIDF--SDNKAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + Y+  LRE+G  FSVNRML+ E  +SR+  E+ L+FLEFNYM++Q+YDF
Sbjct: 119 MVDNGDWLMDLNYVQFLREVGVHFSVNRMLTAECFKSRM--EKGLTFLEFNYMLMQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L   Y C++++GG DQW NI+ GI+L  + +   ++ +T  LLTT+ G KMGKT +GA
Sbjct: 177 LVLNDKYGCKMELGGDDQWSNILGGINLVRKSEGRDVYGMTFKLLTTSEGKKMGKTENGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E T+PY F+QYWRNI D DV +    +T LPM E+ R+  L+   INEAK ++A 
Sbjct: 237 VWLDPEKTTPYEFYQYWRNIADNDVENCLALMTFLPMDEVRRLGALKDAGINEAKAVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA+KA  AA   F     S  +P + +   ++  G+ ++ L++ AG   S
Sbjct: 297 EVTKIVHGEEEAKKAKEAAEAIFGGKGKSDSIPFVEVKSADIEAGIKIIDLLMIAGLTPS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +EARR ++   + +N+  I+     +   D    G + L  GKK+ +   L 
Sbjct: 357 KSEARRAVQQGGVLLNDEKITAFDYTVGTTDLV-NGEMMLQKGKKSFVKVKLV 408


>gi|238749409|ref|ZP_04610914.1| Tyrosyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712064|gb|EEQ04277.1| Tyrosyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 428

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 225/425 (52%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRG 349
             A+ ++A  +T MVHG E    A       F              +    +   E++R 
Sbjct: 301 PRAQYVLAENVTGMVHGAEGLAAAKRITDSLFSGDLKEMTEADFAQLAQDGMPSIELARD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMINSNAVAINGEKQSDPEYIFTDADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|22125858|ref|NP_669281.1| tyrosyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441947|ref|NP_993486.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|21958790|gb|AAM85532.1|AE013799_7 tyrosine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436810|gb|AAS62363.1| tyrosine tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 428

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 228/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK 
Sbjct: 181 LLQAYDFACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRG 349
             A+ ++A  +T MVHG E    A       F   +H         +    +   E++R 
Sbjct: 301 PRAQYVLAENVTGMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTVELNRD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|108807710|ref|YP_651626.1| tyrosyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811988|ref|YP_647755.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598080|ref|YP_001162156.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365720|ref|ZP_01887755.1| tyrosyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162419738|ref|YP_001606965.1| tyrosyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926417|ref|ZP_02222249.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938656|ref|ZP_02227212.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010702|ref|ZP_02231600.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211045|ref|ZP_02237080.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400938|ref|ZP_02306444.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422142|ref|ZP_02313895.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424859|ref|ZP_02316612.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218929460|ref|YP_002347335.1| tyrosyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837891|ref|ZP_04458050.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895051|ref|ZP_04510228.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229898454|ref|ZP_04513600.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902297|ref|ZP_04517417.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|294503624|ref|YP_003567686.1| tyrosyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|81518040|sp|Q8ZE20|SYY_YERPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122979598|sp|Q1C791|SYY_YERPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122980157|sp|Q1CIM5|SYY_YERPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029783|sp|A4TIS1|SYY_YERPP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765192|sp|A9QZ95|SYY_YERPG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|108775636|gb|ABG18155.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108779623|gb|ABG13681.1| tyrosyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115348071|emb|CAL20997.1| tyrosyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209776|gb|ABP39183.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292133|gb|EDM42207.1| tyrosyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162352553|gb|ABX86501.1| tyrosyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913530|gb|EDR32151.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921638|gb|EDR38835.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990404|gb|EDR42705.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208225|gb|EDR52705.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958954|gb|EDR55975.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049791|gb|EDR61199.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056046|gb|EDR65824.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229680632|gb|EEO76728.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688498|gb|EEO80568.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694257|gb|EEO84304.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701939|gb|EEO89961.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361667|gb|ACY58388.1| tyrosyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365593|gb|ACY62150.1| tyrosyl-tRNA synthetase [Yersinia pestis D182038]
 gi|294354083|gb|ADE64424.1| tyrosyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015023|gb|ADV98594.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 424

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 228/423 (53%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+
Sbjct: 59  KRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +L
Sbjct: 119 NSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GK
Sbjct: 179 QAYDFACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   
Sbjct: 239 TEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMG 351
           A+ ++A  +T MVHG E    A       F   +H         +    +   E++R   
Sbjct: 299 AQYVLAENVTGMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTVELNRDAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++
Sbjct: 359 LQQALVNAELVPSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKKHY 418

Query: 412 IIC 414
            + 
Sbjct: 419 CLI 421


>gi|51596607|ref|YP_070798.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|153948792|ref|YP_001400748.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|170024120|ref|YP_001720625.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186895666|ref|YP_001872778.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|81639259|sp|Q66A49|SYY_YERPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029782|sp|A7FHM0|SYY_YERP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765191|sp|B2K5H0|SYY_YERPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765193|sp|B1JJR1|SYY_YERPY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51589889|emb|CAH21521.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|152960287|gb|ABS47748.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|169750654|gb|ACA68172.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186698692|gb|ACC89321.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 424

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 228/423 (53%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+
Sbjct: 59  KRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +L
Sbjct: 119 NSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GK
Sbjct: 179 QAYDFACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   
Sbjct: 239 TEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMG 351
           A+ ++A  +T MVHG E    A       F   +H         +    +   E++R   
Sbjct: 299 AQYVLAENVTGMVHGPEGLAAAKRITESLFSGDLHDMTEADFAQLAQDGMPTVELNRDAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++
Sbjct: 359 LQQALVNAELVPSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKKHY 418

Query: 412 IIC 414
            + 
Sbjct: 419 CLI 421


>gi|206580905|ref|YP_002238204.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|254783610|sp|B5XWP0|SYY_KLEP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|206569963|gb|ACI11739.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 426

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 232/419 (55%), Gaps = 9/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSESDFEQLAQDGMPMVELEKGTDLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V++    S  +AR+ + +N + +N     +    +   D   +    L  GKKN  +  
Sbjct: 364 VESELQPSRGQARKAIAANGVTVNGIKQPDPDYVLNENDRYFSNYTLLRRGKKNWCLIK 422


>gi|150391338|ref|YP_001321387.1| tyrosyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149951200|gb|ABR49728.1| tyrosyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 409

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 183/413 (44%), Positives = 253/413 (61%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+   IL ERGFI Q ++  E+  L  +  +T Y+G+D TA SLH GH  QLM++  +Q
Sbjct: 1   MSNVFDILKERGFIAQATHEDEIQQLLGKEPITFYVGFDPTADSLHVGHFLQLMVMSHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH PI L GGGT++IGDPS + + R+MM  + IQ N++        F+ +   +   +
Sbjct: 61  KAGHIPIFLAGGGTAMIGDPSGKTDMRKMMTPETIQHNVDCFMEQTKRFLDF--SENKGI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  WL S+ YI  +REIG  FSVNRML+ E  +SR+  E+ LSFLEFNYMI+Q+YDF
Sbjct: 119 TVNNADWLMSLNYIPFIREIGKHFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + ++CRLQ+GG DQW NII G DL  R++    + +T  LLTT+ G KMGKT SGA
Sbjct: 177 LELFRRHNCRLQLGGDDQWSNIIAGTDLIRRVEGESAYGMTFTLLTTSEGKKMGKTESGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+   TSP++F+QYWRN+ DADV      LT L M EI+R+A L+G EIN+AK+ +A 
Sbjct: 237 IWLDPNKTSPFDFYQYWRNVGDADVRKCLCLLTFLSMEEINRLATLEGSEINQAKETLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T++VHG EEA +A  AA   F         P+  + K E   G+ +LTL+ K   A+S
Sbjct: 297 EVTSLVHGEEEARRAQEAARALFSKGALGGSFPSTELPKSEFIDGIDVLTLLTKLQLASS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             E RR ++   I IN+  I   +  I    F     + +  GKK +    L 
Sbjct: 357 RGEGRRLVQQGGISINDEKIVEIEAVINQSSFLEDDTLMIKKGKKVYHQVRLV 409


>gi|135197|sp|P00952|SYY_BACST RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157836396|pdb|2TS1|A Chain A, Structure Of Tyrosyl-TRNA SYNTHETASE REFINED AT 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
 gi|157836900|pdb|3TS1|A Chain A, Structure Of Tyrosyl-TRNA SYNTHETASE REFINED AT 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
          Length = 419

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI +N   + +    +  +         +  GKK + +  
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIR 417


>gi|238792277|ref|ZP_04635912.1| Tyrosyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728514|gb|EEQ20033.1| Tyrosyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 428

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 227/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK 
Sbjct: 181 LLQAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + M EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEEINALEDEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRG 349
             A+ ++A  +T MVHG E    A       F   ++         +    +   E+SR 
Sbjct: 301 PRAQYVLAENVTGMVHGAEGLAAAKRITASLFSGDLNEMTEADFAQLAQDGMPTIELSRD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMIGSNAVAINGEKQADPEYTFTDADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|283779905|ref|YP_003370660.1| tyrosyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283438358|gb|ADB16800.1| tyrosyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 426

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 160/427 (37%), Positives = 244/427 (57%), Gaps = 14/427 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D  + LS RG IHQ ++P EL    ++   T Y G+D TA SLH G L  LMLL   Q
Sbjct: 1   MTDIFAELSWRGLIHQTTSPDELPKWLAEQSRTLYCGFDPTADSLHVGSLLPLMLLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+P++L+GG T +IGDPS + E R+++ +  + +N+  I+      + +  G + A 
Sbjct: 61  KAGHRPLALVGGATGMIGDPSGKSEERKLLDTDSLAKNVAGIEQQLRLLLDFE-GPSGAR 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W+    ++D LR++G    V+ M++ +S+  R +RE  +S+ EF+YM+LQAYDF
Sbjct: 120 LLNNHDWMGKFSFLDFLRDVGKHVPVSVMMAKDSISGRFEREAGISYTEFSYMLLQAYDF 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V L K++ C LQ+GGSDQWGNI  GIDL  R++ P+L+ +T PLL  + GTKMGK+  GA
Sbjct: 180 VHLNKHFGCELQIGGSDQWGNITAGIDLARRMQGPQLYGMTCPLLLKSDGTKMGKSEKGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           I+L+ + TSPY F+QYW N+ DADV    + LT L   EID    ++       +++K +
Sbjct: 240 IYLSAKRTSPYAFYQYWVNVADADVGKCLRFLTELTQEEIDALDASRSTDAAARQSQKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVS-RGMG 351
           A E+T M+HG E    A  A    F                  +P+  + KD +S  G+ 
Sbjct: 300 AEELTRMIHGTEGLSAAERATAIFFGAEISQLSDDQLTEIFADVPSQQLPKDRLSGDGLS 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+  +V++G A S  EARR ++     +NN+ I+   +++      S   + L  GKK +
Sbjct: 360 LIDALVESGLAPSKKEARRTIEQGGAYVNNTKITAVDMKLSPASLASETTVVLRSGKKKY 419

Query: 412 IICHLCG 418
            +    G
Sbjct: 420 ALLRFVG 426


>gi|307131416|ref|YP_003883432.1| tyrosyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528945|gb|ADM98875.1| tyrosyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 424

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 225/420 (53%), Gaps = 9/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   
Sbjct: 1   MASNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP++L+GG T +IGDPSF+   R++     +QE +EKI+   + F+ +  G   A
Sbjct: 61  QMAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVEKIRRQAAPFLDFDCGDNSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
           +  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ Y
Sbjct: 121 VAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT S
Sbjct: 181 DFASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N  DADV  F K  T L +  I+              A+ 
Sbjct: 241 GAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFLDIETINALEEEDKNSGAAPRAQY 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLT 354
           ++A E+T +VHG E    A       F+ ++          +    +   E++ G  L  
Sbjct: 301 VLAEEVTRLVHGEEGLTAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQQ 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 361 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFTGADRLFGRYTLLRRGKKNYCLV 420


>gi|304570804|ref|YP_002517319.2| tyrosyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 441

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 203/414 (49%), Positives = 274/414 (66%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +FKS+FL  L  RG+IHQI++  ELD     G + AYIG+D TA SLH G L Q+MLL 
Sbjct: 27  SSFKSEFLRTLEARGYIHQITHADELDTAAQGGPIVAYIGFDATAPSLHVGSLIQIMLLR 86

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +FS F+ +G G T
Sbjct: 87  RLQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKTVFSKFLTFGDGPT 146

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA
Sbjct: 147 DAIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQA 206

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT 
Sbjct: 207 VDFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTA 266

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+  I  +  L+G +INEAKK+
Sbjct: 267 AGAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDRIAELEALEGAQINEAKKV 326

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M HG EEA KA  AA + F+    S  +PT  I+  ++  G+ L  L   AG 
Sbjct: 327 LADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTYEIAAADLDAGVVLAALFADAGL 386

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A S  EARR  +   +K+N+   ++    I   D      +KL+ GKK  ++  
Sbjct: 387 AGSRGEARRLAQGGGLKVNDKAEADANRLITAADLVEG-VVKLAAGKKKIVLVK 439


>gi|16126113|ref|NP_420677.1| tyrosyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|81535267|sp|Q9A756|SYY_CAUCR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783578|sp|B8GWL9|SYY_CAUCN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|13423313|gb|AAK23845.1| tyrosyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220964055|gb|ACL95411.1| tyrosyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 419

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 203/414 (49%), Positives = 274/414 (66%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +FKS+FL  L  RG+IHQI++  ELD     G + AYIG+D TA SLH G L Q+MLL 
Sbjct: 5   SSFKSEFLRTLEARGYIHQITHADELDTAAQGGPIVAYIGFDATAPSLHVGSLIQIMLLR 64

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +FS F+ +G G T
Sbjct: 65  RLQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKTVFSKFLTFGDGPT 124

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA
Sbjct: 125 DAIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQA 184

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT 
Sbjct: 185 VDFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTA 244

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+  I  +  L+G +INEAKK+
Sbjct: 245 AGAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDRIAELEALEGAQINEAKKV 304

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M HG EEA KA  AA + F+    S  +PT  I+  ++  G+ L  L   AG 
Sbjct: 305 LADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTYEIAAADLDAGVVLAALFADAGL 364

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A S  EARR  +   +K+N+   ++    I   D      +KL+ GKK  ++  
Sbjct: 365 AGSRGEARRLAQGGGLKVNDKAEADANRLITAADLVEG-VVKLAAGKKKIVLVK 417


>gi|238796382|ref|ZP_04639891.1| Tyrosyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719827|gb|EEQ11634.1| Tyrosyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 428

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 152/425 (35%), Positives = 227/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK 
Sbjct: 181 LLQAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRG 349
             A+ ++A  +T MVHG E    A       F   ++         +    +   E++R 
Sbjct: 301 PRAQYVLAENVTGMVHGAEGLAAAKRITDSLFSGDLNEMTEADFAQLAQDGMPTIELTRD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMINSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|94962153|gb|ABF48398.1| O-propargyltyrosyl tRNA synthetase [synthetic construct]
          Length = 424

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 232/418 (55%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALGCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ Y  
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYSM 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|148259739|ref|YP_001233866.1| tyrosyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|326403294|ref|YP_004283375.1| tyrosyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|146401420|gb|ABQ29947.1| tyrosyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|325050155|dbj|BAJ80493.1| tyrosyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 417

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 204/409 (49%), Positives = 279/409 (68%), Gaps = 1/409 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DFL     RG+I Q ++   L      G +  YIG+D TA SLH GH+ Q+M+L  LQK 
Sbjct: 8   DFLHEAEARGYIFQCTDTEGLREAMRAGPIAGYIGFDCTADSLHVGHMIQIMMLRLLQKH 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++++GGGT+ IGDPSFR+E+R+++  ++I  N+  I+   ++++++G G +DA+M+
Sbjct: 68  GHKPVAILGGGTTRIGDPSFREEARQLLTEEQIALNMAGIRDNIAAYLRFGEGPSDAIMV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YIDLLRE+G  FSVNRMLSF+SVRSRL+REQ L+FLEFNY ILQAYDF E
Sbjct: 128 NNADWLDTLGYIDLLREVGVHFSVNRMLSFDSVRSRLEREQGLTFLEFNYSILQAYDFRE 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y   LQMGGSDQWGNI+ GIDL  R    +++ LT+PL+TTASG KMGKT +GA+W
Sbjct: 188 LNRRYGVVLQMGGSDQWGNIVQGIDLVRRTDGKQVYGLTAPLITTASGAKMGKTAAGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+    SP+++WQ+WRN +DADV  F +  T LP+ EI R+  LQG EINEAKKI+ATE 
Sbjct: 248 LSAARRSPFDYWQFWRNTEDADVGRFLRLFTDLPLDEIARLEALQGAEINEAKKILATEA 307

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T + HGR  AE+AA  A   F+    ++ +P I I   E+  G+    L+VKAG A S  
Sbjct: 308 TALCHGRAVAEEAAETARRTFEGGEAAETLPGIDIPAAELEAGIPAFALLVKAGLAASNG 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR ++    ++N++ I++E   I L D       KLS GKK+H +  
Sbjct: 368 EARRLIRGGGARLNDAPIADEAHTITLADVIDGA-AKLSAGKKHHRLVR 415


>gi|114765966|ref|ZP_01444980.1| tyrosyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541780|gb|EAU44818.1| tyrosyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 417

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 216/413 (52%), Positives = 286/413 (69%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMIERGYLADCTDYQGLDEALSKGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NIE +K +F+ ++ Y   +T AL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTPGQIDDNIEGMKQVFAKYLDYDRAETPAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDNEIYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A 
Sbjct: 246 MWLNADMLSPYEFWQFWRNSTDADVGRFLKLYTELPVEECDRLGALSGSEINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFAT 363
           E+TT+ HG E A  A   A E F+       +PT+ +S +E+   G+ ++ LIV+AG A 
Sbjct: 306 EVTTLCHGAEAATAAEATAREVFEKGGVGDDLPTLELSAEELGGEGISIVQLIVRAGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  +I+++ +++  L +      S   +KLS GKK H +  L
Sbjct: 366 SGKEAKRLIAENGARIDDAPLTDAGLMLDAAALASP--VKLSAGKKRHALVKL 416


>gi|239828058|ref|YP_002950682.1| tyrosyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808351|gb|ACS25416.1| tyrosyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 419

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/418 (38%), Positives = 234/418 (55%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+  E+IK   S F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVQQWSERIKEQLSRFLDFDAKENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVITFLRDVGKNFGLNYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N  CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT SGAI
Sbjct: 180 LYQNEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTESGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL++E TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   +  E   A+K +A
Sbjct: 240 WLDREKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKAPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
            E+T +VHG E  ++A   +   F  S+       I     +V         + L+ L+V
Sbjct: 300 EEMTKLVHGEEALKQAIRISEALFSGSVSQLTAEEIEQGFKDVPSFEYKGEEVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A    S  +AR  + + AI IN   I +    I  ++        +  GKK + +  
Sbjct: 360 MAKIVPSKRQAREDITNGAIYINGERIQDVNAVITKENRIEGRFTIIRRGKKKYYLIR 417


>gi|32475732|ref|NP_868726.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|81659983|sp|Q7UM14|SYY_RHOBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|32446275|emb|CAD76103.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 438

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 157/428 (36%), Positives = 241/428 (56%), Gaps = 14/428 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
               +  +  L  RG ++Q ++   +  L + G  T YIG+D TA+SLH G + QLM+L 
Sbjct: 10  SNATNSLIEDLRWRGLLNQTTDENGIAELLNSGPQTIYIGFDPTATSLHVGGMMQLMMLR 69

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q+ GH PI+L+GG T +IGDPS + E R ++ + ++Q+N++ +      F+ +  G  
Sbjct: 70  RFQRAGHNPIALVGGATGMIGDPSGKSEERNLLSADQLQKNVDGVAAQMRHFLDFE-GDN 128

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A +LNN  W+    Y++ LR++G  F V  M+  ESVRSRL+ E  LS+ EF+YM+LQA
Sbjct: 129 AAKLLNNFDWMKDYSYLEFLRDVGKNFPVGAMMGKESVRSRLESEAGLSYTEFSYMLLQA 188

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFV LA+ +DCR+Q GGSDQWGNI  GIDLG R+   +LF +T+PLLTT+ G KMGKT 
Sbjct: 189 YDFVNLAQTHDCRIQAGGSDQWGNITAGIDLGRRMLGKQLFGITAPLLTTSDGRKMGKTE 248

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAK 299
           SGA+WL+ E TSPY F+QYW N+ D DV+     LT +  +E D +      +     A+
Sbjct: 249 SGAVWLDPERTSPYAFYQYWINVADEDVMRCLAYLTEIERAEYDELEDKTKNDPGQRTAQ 308

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVS-R 348
           K +A  +T +VHG    + A  A    F                  +P+  + K  +   
Sbjct: 309 KRLAQWLTELVHGEAGVQSAQRATQILFGGELGDTTDSQLREIFADVPSCDVPKSALEGE 368

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G+ ++  +  A    S  +ARR L    + +NN+ + + + ++ + D D    + L  GK
Sbjct: 369 GLWIVEALQTAKLCNSGGDARRALSEGGVYVNNTRVEDVQKRLTVDDLDGRSVLVLRRGK 428

Query: 409 KNHIICHL 416
           + + +  +
Sbjct: 429 RKYALLKI 436


>gi|332161675|ref|YP_004298252.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325665905|gb|ADZ42549.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 424

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 227/423 (53%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+
Sbjct: 59  KRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +L
Sbjct: 119 NSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GK
Sbjct: 179 QAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   
Sbjct: 239 TEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMG 351
           A+ ++A  +T MVHG E    A       F   ++         +    +   E++R   
Sbjct: 299 AQYVLAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTIELTRDAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK++
Sbjct: 359 LQQALVNAELVPSRGQARTMISSNAVAINGEKQSDPEYAFTDADRLFGRYTLLRRGKKHY 418

Query: 412 IIC 414
            + 
Sbjct: 419 CLI 421


>gi|310829601|ref|YP_003961958.1| tyrosyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308741335|gb|ADO38995.1| tyrosyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 408

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 185/413 (44%), Positives = 264/413 (63%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L ERG I Q +N  E+  L     VT YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MENVFDVLKERGMIEQCTNEEEIRKLLGSESVTFYIGFDPTADSLHVGHFIQIMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT++IGDPS R + R++M  + I EN EK K +F  F+ +      A+
Sbjct: 61  RYGHRPIALIGGGTTMIGDPSGRQDLRQVMTQERIAENGEKFKKVFEKFLTFEDD--RAM 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + YI+ LR++GS FSVNRML+ E  +SR+  E+ L+FLEFNYM+LQAYDF
Sbjct: 119 MVNNAEWLLPLNYIEFLRDVGSHFSVNRMLTAECYKSRM--EKGLTFLEFNYMLLQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KNY C++Q GG+DQW NII G +L  R     ++ +T  LLTT+ G KMGKT  GA
Sbjct: 177 YVLHKNYGCKMQFGGNDQWSNIIAGAELVRRKDAQTVYGMTFSLLTTSEGIKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+ DADV      LT LPM E+ R+  L+G EIN+AK+I+A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVADADVEKCLAMLTFLPMDEVHRLGSLEGSEINKAKEILAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T MVH +E+A+KA  A+   F   + +  +P++ +S+D +  GM +LTL+  AG   S
Sbjct: 297 EVTAMVHSKEDADKAQEASRALFAGGVKTDDIPSVDLSRDALGDGMEILTLLDAAGLIPS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +E RR ++   I+++ + I++ K  +   DF     I +  GKK +    L 
Sbjct: 357 RSEGRRLVQQGGIEVDGNKITDIKALVTPADFKDDA-IIVKKGKKVYRQIKLV 408


>gi|135196|sp|P04077|SYY_BACCA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|143793|gb|AAA22877.1| tyrosyl-tRNA synthetase [Bacillus caldotenax]
          Length = 419

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI +N   + +    +  +         +  GKK + +  
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIR 417


>gi|290475488|ref|YP_003468376.1| tyrosine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174809|emb|CBJ81610.1| tyrosine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 428

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 226/421 (53%), Gaps = 9/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F ++ +  L +RG + Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L   
Sbjct: 6   FSNNLIKQLQDRGLVAQVTDEEALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCLKRF 65

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q TGHKPI+L+GG T +IGDPSF+   R++   + ++E +EKI+   S F+ +  G+  A
Sbjct: 66  QLTGHKPIALVGGATGLIGDPSFKATERKLNTEETVKEWVEKIRKQVSPFLDFDCGENRA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
            + NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +S+ EF+Y +LQ+Y
Sbjct: 126 EIANNYEWFGEMDVLTFLRDIGKHFSVNQMINREAVKQRLHRDDVGISYTEFSYNLLQSY 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L   Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  
Sbjct: 186 DFANLNGKYGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTEG 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W +  DAD   F K  T + + EI+          +   A+ 
Sbjct: 246 GAVWLDPKKTSPYKFYQFWISTADADAYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQY 305

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLT 354
           ++A ++T MVHG      A       F              +    +   E+ +   L  
Sbjct: 306 VLAEQVTGMVHGEAGLAAAKRITNSLFSGIVADLTEEDLAQLAQDGMPAIELEKDADLQQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V AG   S  +AR  + SNA+ IN    S+ +      D        L  GKK++ + 
Sbjct: 366 ALVTAGLVPSRGQARTMIGSNAVSINGEKQSDAEYTFADSDRLFERYTLLRRGKKHYCLI 425

Query: 415 H 415
           +
Sbjct: 426 N 426


>gi|238782597|ref|ZP_04626628.1| Tyrosyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238716524|gb|EEQ08505.1| Tyrosyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 428

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 152/425 (35%), Positives = 227/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDEEALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK 
Sbjct: 181 LLQAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRG 349
             A+ ++A  +T MVHG E    A       F   ++         +    +   E++R 
Sbjct: 301 PRAQYVLAENVTAMVHGAEGLAAAKRITDSLFSGDLNEMTQADFAQLAQDGMPTIELTRD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMINSNAVAINGEKQADPEYLFTDADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|318605833|emb|CBY27331.1| tyrosyl-tRNA synthetase; cluster 1 [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 424

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 227/423 (53%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+
Sbjct: 59  KRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDMVNEWVEKIRRQVSPFLDFDCGE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +L
Sbjct: 119 NSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GK
Sbjct: 179 QAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   
Sbjct: 239 TEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMG 351
           A+ ++A  +T MVHG E    A       F   ++         +    +   E++R   
Sbjct: 299 AQYVLAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTIELTRDAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK++
Sbjct: 359 LQQALVNAELVPSRGQARTMISSNAVAINGEKQSDPEYAFTDADRLFGRYTLLRRGKKHY 418

Query: 412 IIC 414
            + 
Sbjct: 419 CLI 421


>gi|238753615|ref|ZP_04614977.1| Tyrosyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708167|gb|EEQ00523.1| Tyrosyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 428

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 228/428 (53%), Gaps = 11/428 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLQGHRPVALVGGATGLIGDPSFKATERKLNTADTVNEWVEKIRHQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
               A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 RNNSAITANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKEHGVELQIGGSDQWGNITSGIDLTRRLHQQQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEEDQNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRG 349
             A+ ++A ++T MVHG      A       F   +H         +    +   E++R 
Sbjct: 301 PRAQYVLAEKVTGMVHGEAGLAAAKRITDSLFSGHLHEMTETDFAQLAQDGMPTIELTRD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A  A S  +AR+ + SNA+ IN    ++ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELAPSRGQARKLIASNAVTINGEKQADPEYSFTDADRLFGRFSLLRRGKK 420

Query: 410 NHIICHLC 417
           ++ +    
Sbjct: 421 HYCLVSWI 428


>gi|327542973|gb|EGF29422.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 432

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 157/428 (36%), Positives = 240/428 (56%), Gaps = 14/428 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
               +  +  L  RG ++Q ++   +  L + G  T YIG+D TA+SLH G + QLM+L 
Sbjct: 4   SNATNPLIEDLRWRGLLNQTTDENGIAELLNSGPQTIYIGFDPTATSLHVGGMMQLMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q+ GH PI+L+GG T +IGDPS + E R ++ + ++Q+N++ +      F+ +  G  
Sbjct: 64  RFQRAGHNPIALVGGATGMIGDPSGKSEERNLLSADQLQKNVDGVAAQMRHFLDFE-GDN 122

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A +LNN  W+    Y++ LR++G  F V  M+  ESVRSRL+ E  LS+ EF+YM+LQA
Sbjct: 123 AAKLLNNFDWMKDYSYLEFLRDVGKNFPVGAMMGKESVRSRLESEAGLSYTEFSYMLLQA 182

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFV LA+ +DCR+Q GGSDQWGNI  GIDLG R+   +LF +T+PLLTT+ G KMGKT 
Sbjct: 183 YDFVNLAQTHDCRIQAGGSDQWGNITAGIDLGRRMLGKQLFGITAPLLTTSDGRKMGKTE 242

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAK 299
           SGA+WL+ E TSPY F+QYW N+ D DV+     LT +  +E D +      +     A+
Sbjct: 243 SGAVWLDPERTSPYAFYQYWINVADEDVMRCLAYLTEIERAEYDELEDKTKNDPGQRTAQ 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVS-R 348
           K +A  +T +VHG    + A  A    F                  +P+  + K  +   
Sbjct: 303 KRLAQWLTELVHGEAGVQSAQRATQILFGGELGDTTDSQLREIFADVPSCDVPKSALEGE 362

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G+ ++  +  A    S  +ARR L    + +NN+ + + + ++   D D    + L  GK
Sbjct: 363 GLWIVEALQTAKLCNSGGDARRALSEGGVYVNNTRVEDVQKRLTADDLDGRSVLVLRRGK 422

Query: 409 KNHIICHL 416
           + + +  +
Sbjct: 423 RKYALLKI 430


>gi|56421338|ref|YP_148656.1| tyrosyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81346651|sp|Q5KW48|SYY_GEOKA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56381180|dbj|BAD77088.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
          Length = 419

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  ++S AI +N   + +    +  +         +  GKK + +  
Sbjct: 360 SAGISPSKRQAREDIQSGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIR 417


>gi|123442400|ref|YP_001006379.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|189029781|sp|A1JNV3|SYY_YERE8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122089361|emb|CAL12209.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 424

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 226/423 (53%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G 
Sbjct: 59  KRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGD 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +L
Sbjct: 119 NSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GK
Sbjct: 179 QAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   
Sbjct: 239 TEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNLEEINALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMG 351
           A+ ++A  +T MVHG E    A       F   ++         +    +   E++R   
Sbjct: 299 AQYVLAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTIELTRDAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK++
Sbjct: 359 LQQALVNAELVPSRGQARTMISSNAVAINGEKQSDPEYAFTDADRLFGRYTLLRRGKKHY 418

Query: 412 IIC 414
            + 
Sbjct: 419 CLI 421


>gi|158319957|ref|YP_001512464.1| tyrosyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158140156|gb|ABW18468.1| tyrosyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 409

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 179/413 (43%), Positives = 252/413 (61%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L +RGF+ Q ++  E+  L  +  +T YIG+D TA SLH GH  QLM +  LQ
Sbjct: 1   MENIFDVLKDRGFVKQFTHEDEIRELLGKEKITFYIGFDPTADSLHVGHFVQLMAMSHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI L GGGT ++GDPS R + R+MM  + IQ N+          I      + A+
Sbjct: 61  KAGHRPIFLAGGGTGMVGDPSGRTDMRQMMTPEIIQHNVNCFIDQSKRLIDLSEN-SGAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL S+ YI  +REIG+ FSVNRML+ E  ++R+  E+ LSF EFNYMI+QAYDF
Sbjct: 120 IENNANWLLSLNYISFIREIGTHFSVNRMLTAECFKNRM--EKGLSFFEFNYMIMQAYDF 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQ+GG DQW NII G DL  R+++   + +T  LLTT+ G KMGKT SGA
Sbjct: 178 LELFRRYGCRLQLGGDDQWSNIIAGADLIRRVESEPAYGMTFTLLTTSEGVKMGKTQSGA 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ + TSP+ F+QYWRN+ DADV      LT +PM E+ ++  L+G EIN AK+I+A 
Sbjct: 238 VWLDPKKTSPFEFYQYWRNVADADVEKCLSLLTFIPMDEVRKLGALEGAEINRAKEILAF 297

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA KA  AA   F        +P+  + + E++ G+ ++TL+V A    S
Sbjct: 298 EVTKLVHGEEEATKAEEAAKALFGQGALGGSIPSTDLPRSELAEGIDIITLLVTAELIPS 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             E RR ++   + IN+  I++    I L DF     + +  GKK +    L 
Sbjct: 358 RGEGRRLIQQGGVAINDEKITDINTVITL-DFFKEDTLMIKKGKKTYHQVKLV 409


>gi|99080764|ref|YP_612918.1| tyrosyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379010|sp|Q1GI60|SYY_SILST RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|99037044|gb|ABF63656.1| tyrosyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 417

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 220/414 (53%), Positives = 284/414 (68%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++I+ ERGF+   ++ + LD     G  TAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIAIMMERGFLADCTDYQGLDEALVSGTQTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F+ ++ Y   K  A+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFAKYLDYSDAKNGAM 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLENEIYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN EM SPY FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EINE K I+A 
Sbjct: 246 IWLNDEMLSPYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINEGKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  A   A E F+       +PT+S+S  E+  GM ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAARAAEATAREVFEKGGVGDDLPTLSLSPAELGDGMSIVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 GKEAKRLISENGAKLDDAPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLEG 417


>gi|87310770|ref|ZP_01092897.1| tyrosyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286527|gb|EAQ78434.1| tyrosyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 449

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 157/426 (36%), Positives = 232/426 (54%), Gaps = 14/426 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +D  + L  RG ++Q +    L    ++   T Y G+D TA SLH G L  LM L   
Sbjct: 21  LMNDIFADLKWRGLVYQTTADDHLQKWLNEKPRTVYAGFDPTAESLHVGSLLPLMQLRRF 80

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI+L+GG T +IGDPS +   R ++   ++++N+  IK   +  + +      A
Sbjct: 81  QKAGHRPIALVGGATGMIGDPSGKSAERNLLSVDQLEQNVAGIKAQVAKLVDFDETPAGA 140

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAY 182
            ++NN  W+    Y++ LR++G  F VN M++ +S+R+RL+RE   +S+ EF+YM+LQAY
Sbjct: 141 QLVNNFDWMNKFTYLEFLRDVGKHFPVNVMMAKDSIRNRLEREDSGISYTEFSYMLLQAY 200

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFV L + YDC LQ+GGSDQWGNI  G +LG R+   +LF +T PLLT A GTKMGKT S
Sbjct: 201 DFVHLNQAYDCELQIGGSDQWGNITAGTELGRRMHQKQLFGMTCPLLTKADGTKMGKTES 260

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GAIWL+ E TSPY F+QYW N+ D D     + LT L   EI+    ++ +      ++K
Sbjct: 261 GAIWLSAERTSPYAFYQYWFNVADEDAGKCLRFLTELSHEEIETLDKSRAEEPHQRASQK 320

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEV-SRG 349
            +A  +T ++HG E    A  A    F                  +P+  +++D +   G
Sbjct: 321 SLAEHLTQLIHGDEGLSTARRATEIFFGGTIEDMNDAQLGQIFADVPSSELARDRLTGDG 380

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + LL   V+AG A S  EARR +      +NN         +  +D  S   + L  GKK
Sbjct: 381 LSLLDAFVEAGLAKSKGEARRAISQGGAYVNNVRAEGVDQALTERDLASETVMVLRSGKK 440

Query: 410 NHIICH 415
            + +  
Sbjct: 441 KYALLR 446


>gi|254469446|ref|ZP_05082851.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961281|gb|EEA96476.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 406

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 214/404 (52%), Positives = 293/404 (72%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + ERGF+HQ+SN   LD LC+   VTAYIG+D TASSLH G L Q+M+L+W Q+ GH+ I
Sbjct: 1   MEERGFLHQLSNAEGLDELCANETVTAYIGFDCTASSLHVGSLVQIMMLYWFQQAGHRAI 60

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +LMG GT+ +GDP+ +DESR+++  + I++N   IK +F  F+K+G G +DA+M++N  W
Sbjct: 61  TLMGSGTTRVGDPTGKDESRKVLTDETIEDNKNGIKQVFEKFLKFGDGPSDAMMMDNADW 120

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D LR++G +FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ YD++E+ +  
Sbjct: 121 LLKLNYMDFLRDVGRYFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQGYDYLEIHRRT 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            CRLQMGGSDQW NI+ G+DLG RL   +LFALT+PLLTTASG KMGKT +GA+WLN +M
Sbjct: 181 GCRLQMGGSDQWSNILSGVDLGRRLADKELFALTTPLLTTASGAKMGKTAAGAVWLNADM 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            SPY++WQ+WRN +DADV  F K  T LPM EI R+A L+G  INEAKK++ATE T ++H
Sbjct: 241 LSPYDYWQFWRNTEDADVEKFLKLFTILPMDEIKRLAALEGAGINEAKKVLATEATALLH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           GREEAEKAA  A + F+   ++  +PTI I+  E++ G+G+L + V AG  TS  E RR+
Sbjct: 301 GREEAEKAAETARKAFEEGANAAGLPTIEIAAAELNDGIGILNVFVTAGLCTSNGEVRRN 360

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +K  A++IN+    +   +I   D    G IKLS GKK H++  
Sbjct: 361 IKGGAVRINDKAEQDHTREITEADLTDDGVIKLSLGKKKHVLVK 404


>gi|50120866|ref|YP_050033.1| tyrosyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81645269|sp|Q6D5V2|SYY_ERWCT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49611392|emb|CAG74839.1| tyrosyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 425

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 224/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  S+ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTSETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +D LR+IG  FSVN+M+S E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+   TSPY F+Q+W N  DADV  F K  T + +  ID          +   A+ ++
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLENIDALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T MVHG    E A       F              +    +   E+     L   +
Sbjct: 304 AEDVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENSADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    +N +      D        L  GKK++ + 
Sbjct: 364 VSAELVPSRGQARTMISSNAVTINGEKQANPEYIFSASDRLFDRYTLLRRGKKHYCLI 421


>gi|238757716|ref|ZP_04618899.1| Tyrosyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238703959|gb|EEP96493.1| Tyrosyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 428

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 151/425 (35%), Positives = 226/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GDNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK 
Sbjct: 181 LLQAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEDEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRG 349
             A+ ++A  +T MVHG +    A       F   ++         +    +   E+SR 
Sbjct: 301 PRAQYVLAENVTGMVHGVDGLAAAKRITASLFSGDLNEMTEADFAQLAQDGMPTVELSRD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ +N    ++ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMISSNAVALNGEKQADPEYIFTDADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|197285245|ref|YP_002151117.1| tyrosyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227355671|ref|ZP_03840065.1| tyrosyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|194682732|emb|CAR42933.1| tyrosyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227164278|gb|EEI49171.1| tyrosyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 428

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 229/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + ++ L ERG I Q+++   L     QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSKNLITQLQERGLIAQVTDEAALVERLEQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVEKIRKQVSPFLDFDR 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A + NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF Y 
Sbjct: 121 GENSAELANNYDWFGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L KN    LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T + GTK 
Sbjct: 181 LLQAYDFASLNKNLGVELQIGGSDQWGNITSGIDLTRRFNQKQVFGMTVPLITKSDGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGQA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRG 349
             A++++A ++T +VHG E    A       F  +I        + +    +   E+ +G
Sbjct: 301 PRAQRVLAEQVTRLVHGEEGLTAAKRITDSLFSGAIADLTQADLEQLAQDGMPTIELEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN     N +   + +DF       L  GKK
Sbjct: 361 NDLQQALVNAELVPSRGQARTMIGSNAVSINGEKQDNPEYVFEEKDFLFGHYSILRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLV 425


>gi|253989418|ref|YP_003040774.1| tyrosyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780868|emb|CAQ84030.1| tyrosyl-tRNA synthetase 1 [Photorhabdus asymbiotica]
          Length = 424

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 228/423 (53%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  ++ +  L ERG I Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MSS--NNLIKQLQERGLIAQVTDENALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+   R++  +  ++E +EKI+   S F+ +  G 
Sbjct: 59  KRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTADTVKEWVEKIRRQVSPFLDFDCGD 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A   NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +L
Sbjct: 119 NSAKTANNYDWFGGMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDFV L + +   LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GK
Sbjct: 179 QSYDFVRLNEEHGVELQIGGSDQWGNITSGIDLTRRINQKQVFGMTVPLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+    A     +   
Sbjct: 239 TEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEADKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMG 351
           A+ ++A ++T MVHG E    A       F              +    +   E+ RG  
Sbjct: 299 AQYVLAEQVTGMVHGEEGLSAAKRITESLFSGTVADLTEADFAQLAQDGMPVIELERGAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V AG   S  +AR  + SNA+ IN    S  +      +F       L  GKK+ 
Sbjct: 359 LQQALVNAGLVPSRGQARTMISSNAVAINGEKQSEPEYVFTDSNFLFGRYTLLRRGKKHD 418

Query: 412 IIC 414
            + 
Sbjct: 419 CLI 421


>gi|271500224|ref|YP_003333249.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343779|gb|ACZ76544.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 424

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 152/420 (36%), Positives = 224/420 (53%), Gaps = 9/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   
Sbjct: 1   MASNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP++L+GG T +IGDPSF+   R++   + +QE +EKI+   + F+ +  G   A
Sbjct: 61  QMAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVEKIRRQVAPFLDFDCGTNSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
           +  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ Y
Sbjct: 121 IAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L   +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  
Sbjct: 181 DFASLNALHGVELEIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKADGTKFGKTEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N  DADV  F K  T L +  I+              A+ 
Sbjct: 241 GAVWLDPKKTSPYKFYQFWINTSDADVYRFLKFFTFLDIDVINALEEEDKNSGVAPRAQY 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLT 354
           ++A E+T +VHG E    A       F+ ++          +    +   E++ G  L  
Sbjct: 301 VLAEEVTRLVHGEEGLTAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQQ 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN     + +      D        L  GKKN+ + 
Sbjct: 361 ALVDSELQPSRGQARKTIASNAITINGEKQFDPEYTFTDADRLFGRYTLLRRGKKNYCLV 420


>gi|238762512|ref|ZP_04623482.1| Tyrosyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238699157|gb|EEP91904.1| Tyrosyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 428

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 229/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +    S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMTSSNLIKQLQERGLVAQVTDENALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFNC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK 
Sbjct: 181 LLQAYDFACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLAEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG 349
             A+ ++A  +T MVHG E    A       F   ++         +    +   E++R 
Sbjct: 301 PRAQYVLAENVTGMVHGEEGLAAAKRITASLFSGDLNQMTEADFAQLAQDGMPTIELTRD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN   +S+ +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMISSNAVAINGEKLSDPEYIFTDADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|149202768|ref|ZP_01879740.1| tyrosyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144050|gb|EDM32084.1| tyrosyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 417

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 211/413 (51%), Positives = 283/413 (68%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL+++  RG++   ++ + LD   S G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFLNVMMSRGYLADCTDYQGLDEALSAGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  +  +F+ ++ YG G  DA+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLSPAQIDDNIAGMNRVFARYLAYGEGPQDAM 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQMGGSDQWGNII GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRHGCVLQMGGSDQWGNIINGIDLTRRVIDHEVFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 VWLSGDMLSPYEFWQFWRNTTDADTGRFLKLYTELPVEECDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT++HG E A  A   A E F+       +PT+ ++ DE++ G+ ++ LIV+AG A S
Sbjct: 306 AVTTLLHGPEAAAAAEATAREVFEHGGVGDDLPTVEVTADELAEGISIVQLIVRAGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N  ++++  +++  L I      S   IKLS GKK H +  L 
Sbjct: 366 GKEAKRLITENGARLDDEPLTDAGLMIDAAALTSP--IKLSAGKKRHALVKLS 416


>gi|329113797|ref|ZP_08242568.1| Tyrosyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696807|gb|EGE48477.1| Tyrosyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 422

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 198/418 (47%), Positives = 282/418 (67%), Gaps = 2/418 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             FKS F+   + RGFI Q ++   LD L ++  V AYIG+D TA SLH G L Q+M+L 
Sbjct: 4   NGFKSSFMREAAARGFIFQCTDADALDALMAEKSVAAYIGFDPTADSLHVGSLIQIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK GH+PI+L+GGGT+ IGDPSFR+E+RR+M    IQ N+  I+G    F+ +G+G +
Sbjct: 64  LLQKHGHRPIALVGGGTARIGDPSFREEARRLMTEDIIQTNLAGIEGCLRQFLTFGSGAS 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           +A+++NN  WL  + YIDLLR++G  FS+NRML+F+SV++RL+REQ L+FLEFNY ILQ+
Sbjct: 124 EAVLVNNADWLDKLAYIDLLRDVGVHFSINRMLAFDSVKNRLEREQGLTFLEFNYSILQS 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL +  D  LQ+GGSDQWGNII G++L  R     +  LT+PLLTTASG KMGKT 
Sbjct: 184 YDFRELNRRMDVVLQLGGSDQWGNIISGVELVRRTDQKSVMGLTTPLLTTASGAKMGKTA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WL+++    +++WQ+WRN +DADV  F +  T LP+ E  R+  LQG EINEAKK+
Sbjct: 244 NGAVWLSEKRLPVFDYWQFWRNTEDADVGRFLRLFTELPLEECARLEALQGAEINEAKKV 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           +ATE T + HGR  A  AA AA + F+   + +  +P   +++ +++ G+ +  L  +AG
Sbjct: 304 LATEATALCHGRNAALAAAEAARQTFEEGRVAAADLPVHEVAEADMAAGIPVFRLFAEAG 363

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
              +  EARR ++    ++NN +I +E   I  QD      IKLS GKK+H++  + G
Sbjct: 364 LVKTNGEARRLVRGGGARLNNDVIQDENRLITQQDMVDGA-IKLSAGKKHHVLVKVGG 420


>gi|297529039|ref|YP_003670314.1| tyrosyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252291|gb|ADI25737.1| tyrosyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 419

 Score =  386 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +I+   S F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIQEQLSRFLDFEAHGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI +N   + +    +  +         +  GKK + +  
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIR 417


>gi|84684873|ref|ZP_01012773.1| tyrosyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84667208|gb|EAQ13678.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 421

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 215/412 (52%), Positives = 288/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   + GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 11  KSDFMRVMIERGYLADCTDYQALDEALTNGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 70

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI+ +K +F+ ++ YG G++DAL
Sbjct: 71  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIDGMKQVFAKYLSYGDGESDAL 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 131 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 190

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 191 LELNRRYGCTLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQGGA 250

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T L + E +R+A L G  INEAK ++A 
Sbjct: 251 MWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELSVEECERLAALPGNRINEAKIVLAN 310

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT+ HG E A  A   A E F+       +PT++++ DE+  G+ +  LI ++G A +
Sbjct: 311 EVTTLCHGAEAAAAAEATAREVFEKGGAGDDLPTLTLTADEIGDGISITQLITRSGLAKT 370

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +     K+N++ +++  L I   D D+   IKLS GKK H +  L
Sbjct: 371 GKEAKRLIADKGAKLNDADVTDAGLMITAADLDAP--IKLSAGKKRHALVTL 420


>gi|261418185|ref|YP_003251867.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767855|ref|YP_004133356.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374642|gb|ACX77385.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112721|gb|ADU95213.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 419

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L  +  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRELLKEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +I+   S F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIQEQLSRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAVRISEALFSGDIGNLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI +N   + +    +  +         +  GKK + +  
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIR 417


>gi|212638313|ref|YP_002314833.1| tyrosyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559793|gb|ACJ32848.1| Tyrosyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 429

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 157/418 (37%), Positives = 234/418 (55%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  V  Y G+D TA SLH GHL  +++L   Q+ 
Sbjct: 12  DLLRDLQFRGLINQMTDEDGLKALLAEESVKVYCGFDPTADSLHIGHLLPILMLRRFQRA 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R++   + +    E+IK   S F+ +      A++ 
Sbjct: 72  GHQPIALVGGATGLIGDPSGKKAERKLNEKETVAYYSERIKQQLSRFLDFEKVDNPAIIA 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SRL  E  +SF EF+YMILQAYDF++
Sbjct: 132 NNYEWIGSLDVITFLRDVGKNFGINYMLAKESVQSRL--ETGISFTEFSYMILQAYDFLK 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L + Y C+LQ+GGSDQWGNI  G++L  + +   K+F LT PL+T A GTK GKT  GA+
Sbjct: 190 LYEMYGCKLQVGGSDQWGNITAGLELIRKTEEDAKVFGLTVPLVTKADGTKFGKTEGGAV 249

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N DD DVV + K  T L   EI  + +   +  E   A+K +A
Sbjct: 250 WLDADKTSPYEFYQFWINTDDRDVVKYLKYFTFLSHEEIIELERQTAEAPEKRAAQKALA 309

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLIV 357
            E+T +VHG E  ++A   +   F   +       I     +V       + M L+ L+V
Sbjct: 310 AEMTRLVHGEEALQQAINISEALFSGDVAKLTADEIEQGFKDVPSYVCDEKEMALVDLLV 369

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +G   S  +AR  + + AI IN   + +    +  +D        +  GKK + +  
Sbjct: 370 ASGICPSKRQAREDVTNGAIYINGERVQDVNKMMTEEDRMEGRFTIIRRGKKKYYLIR 427


>gi|89076033|ref|ZP_01162396.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048268|gb|EAR53849.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 424

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 152/417 (36%), Positives = 228/417 (54%), Gaps = 9/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L +RG I QI++   L    ++G +T Y G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 5   NLIQELKDRGLIAQITDEEALSERLAKGPITLYCGFDPTADSLHLGHLVPLLCLKRFQEA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P++L+GG T +IGDPSF+   R +     +   + KI+   S F+ +      A M+
Sbjct: 65  GHNPVALVGGATGMIGDPSFKAAERSLNTLDTVSGWVTKIQRQVSPFLDFDNPTNPARMV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W  ++  +  LR+IG  FSVN+M+S ESV+ R+ R++  +SF EF Y +LQ+YDF 
Sbjct: 125 NNHDWFGNMDVLTFLRDIGKHFSVNQMISKESVKQRINRDEVGISFTEFAYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            + K     LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA+
Sbjct: 185 SMNKEMGMELQIGGSDQWGNITAGIDLTRRMNQQQVFGMTVPLITKSDGTKFGKTEGGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIA 303
           WL+   TSPY F+Q+W N  DADV  F    T L   EI ++        +  EA++I+A
Sbjct: 245 WLDPSKTSPYKFYQFWMNTADADVYRFLCFFTFLSEEEIQQIEDTDRNSGKAPEAQRILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIV 357
            + T +VHG+E+ E A       F+  +          +    +   E   G  L  ++V
Sbjct: 305 EQATRLVHGQEQLEAAQNITRCLFENDLAHLSESDFAQLAQDGMPSAEAENGDDLQQVLV 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           K+G A+S ++A+ H+ SNAI +N   +     +    D        +  GKKN+ + 
Sbjct: 365 KSGLASSRSQAKTHISSNAIMVNGEKLGEPFYEFTDADKLFGRYTLIRRGKKNYSLI 421


>gi|295399545|ref|ZP_06809527.1| tyrosyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294979011|gb|EFG54607.1| tyrosyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 419

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 230/418 (55%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+   +IK   + F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNPKETVQQWSNRIKEQLARFLDFDAEENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVISFLRDVGKHFGINYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GA+
Sbjct: 180 LYQTEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKAPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
            E+T +VHG +  ++A   +   F  S+       I     +V         + L+ L+V
Sbjct: 300 EEMTKLVHGEDALKQAVRISEALFSGSVSQLTAEEIEQGFKDVPSFEYEGEEVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A    S  +AR  + + AI IN   + +    I   +        +  GKK + +  
Sbjct: 360 MAKIVPSKRQAREDIANGAIYINGERMQDVNAVITKANRIEGRFTIIRRGKKKYYLIR 417


>gi|251789337|ref|YP_003004058.1| tyrosyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537958|gb|ACT06579.1| tyrosyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 424

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 225/420 (53%), Gaps = 9/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   
Sbjct: 1   MASNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP++L+GG T +IGDPSF+   R++     +QE +EKI+   + F+ +  G   A
Sbjct: 61  QMAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVEKIRRQVAPFLDFDCGDNSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
           +  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ Y
Sbjct: 121 VAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT S
Sbjct: 181 DFASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N  DADV  F K  T L +  I+              A+ 
Sbjct: 241 GAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFLDIDVINALEEEDKNSGVAPRAQY 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLT 354
           ++A E+T +VHG E    A       F+ ++          +    +   E++ G  L  
Sbjct: 301 VLAEEVTRLVHGEEGLVAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQQ 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 361 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFTDADRLFGCYTLLRRGKKNYCLV 420


>gi|312109900|ref|YP_003988216.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215001|gb|ADP73605.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 419

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 230/418 (55%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+   +IK   + F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNPKETVQQWSNRIKEQLARFLDFDAEENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVISFLRDVGKHFGINYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GA+
Sbjct: 180 LYQTEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKTPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
            E+T +VHG +  ++A   +   F  S+       I     +V         + L+ L+V
Sbjct: 300 EEMTKLVHGEDALKQAVRISEALFSGSVSQLTAEEIEQGFKDVPSFEYEGEEVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A    S  +AR  + + AI IN   + +    I   +        +  GKK + +  
Sbjct: 360 MAKIVPSKRQAREDIANGAIYINGERMQDVNAVITKANRIEGRFTIIRRGKKKYYLIR 417


>gi|258543630|ref|YP_003189063.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634708|dbj|BAI00684.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637764|dbj|BAI03733.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640818|dbj|BAI06780.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643873|dbj|BAI09828.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646928|dbj|BAI12876.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649981|dbj|BAI15922.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652971|dbj|BAI18905.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256656025|dbj|BAI21952.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 422

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 195/416 (46%), Positives = 280/416 (67%), Gaps = 2/416 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             FKS F+   + RGFI Q ++   LD L ++  V AYIG+D TA SLH G L Q+M+L 
Sbjct: 4   NGFKSSFMREAAARGFIFQCTDADALDALMAEKSVAAYIGFDPTADSLHVGSLIQIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK GH+PI+L+GGGT+ IGDPSFR+E+RR+M    IQ N+  I+G    F+ +G+G +
Sbjct: 64  LLQKHGHRPIALVGGGTARIGDPSFREEARRLMTEDIIQTNLAGIEGCLRQFLTFGSGAS 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           +A ++NN  WL  + YIDLLR++G  FS+NRML+F+SV++RL+REQ L+FLEFNY ILQ+
Sbjct: 124 EAALVNNADWLDKLAYIDLLRDVGVHFSINRMLAFDSVKNRLEREQGLTFLEFNYSILQS 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL +  +  LQ+GGSDQWGNII G++L  R     +  LT+PLLTT+SG KMGKT 
Sbjct: 184 YDFRELNRRMNVVLQLGGSDQWGNIISGVELVRRTDQKSVMGLTTPLLTTSSGAKMGKTA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WL+++    +++WQ+WRN +DADV  F +  T LP+ E  R+  LQG EINEAKK+
Sbjct: 244 NGAVWLSEKRLPVFDYWQFWRNTEDADVGRFLRLFTELPLEECARLEALQGAEINEAKKV 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           +ATE T + HGR  A  AA AA + F+   + +  +P   +++ +++ G+ +  L  +AG
Sbjct: 304 LATEATALCHGRNAALAAAEAARQTFEEGRVAAADLPVHEVAEADMAAGIPVFRLFAEAG 363

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              +  EARR ++    ++NN +I +E   I  QD      IKLS GKK+H++  +
Sbjct: 364 LVKTNGEARRLVRGGGARLNNDVIQDENKLITQQDMVDGA-IKLSAGKKHHVLVKV 418


>gi|304397706|ref|ZP_07379583.1| tyrosyl-tRNA synthetase [Pantoea sp. aB]
 gi|304354878|gb|EFM19248.1| tyrosyl-tRNA synthetase [Pantoea sp. aB]
          Length = 424

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 228/424 (53%), Gaps = 11/424 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIQQLQERGLIAQVTDEAALTEKLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+   R++  S  + E +EKI+   + F+ +  G 
Sbjct: 59  KRFQDAGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVNEWVEKIRQQVAPFLDFDCGS 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +L
Sbjct: 119 NSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF  L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GK
Sbjct: 179 QGYDFACLNELHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T L + EI+              
Sbjct: 239 TEGGAVWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEINALEEEDKNSGTAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMG 351
           A+ ++A ++T +VHG      A       F  S+        + +    +    +     
Sbjct: 299 AQYVLAEQVTRLVHGEAGLTAAKRITASLFSGSVSEMTEADFEQLAQDGMPTIALGADDD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +VKA    S  +AR  + SNA+ +N    S+ + +    D        L  GKK++
Sbjct: 359 LQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSDKLFNRYTLLRRGKKHY 418

Query: 412 IICH 415
            + +
Sbjct: 419 CLIN 422


>gi|82543995|ref|YP_407942.1| tyrosyl-tRNA synthetase [Shigella boydii Sb227]
 gi|97201953|sp|Q320Z4|SYY_SHIBS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81245406|gb|ABB66114.1| tyrosine tRNA synthetase [Shigella boydii Sb227]
          Length = 424

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/418 (35%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + ++ +S  EF+Y + Q YD+
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDEGMSITEFSYNLQQGYDW 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L  +Y   LQ+GGSDQ  NI   IDL  RL    +  LT PL+T A GTK GKT  GA
Sbjct: 184 TCLNTHYYVELQIGGSDQRWNITSEIDLTRRLHQNHVLGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|322833470|ref|YP_004213497.1| tyrosyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321168671|gb|ADW74370.1| tyrosyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 424

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 227/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  NGHKPVALVGGATGLIGDPSFKATERKLNTNETVNEWVEKIRQQVSPFLDFSCGENSAIT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ASLYDLHKVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINALEEEDKTSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS------IHSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG E    A       F  S      +    +    +   EV R   L   +
Sbjct: 304 AEEVTGMVHGAEGLAAAKRITQSLFSGSLSEMTEVDFGQLAQDGLELFEVPRDTDLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V AG A S  +AR  + SNA+ +N    ++ +      D        L  GKKN+ + 
Sbjct: 364 VIAGMAPSKGQARTMISSNAVSVNGEKQTDTEYSFADSDRLFGRYTLLRRGKKNYTLL 421


>gi|163746477|ref|ZP_02153835.1| tyrosyl-tRNA synthetase, putative [Oceanibulbus indolifex HEL-45]
 gi|161380362|gb|EDQ04773.1| tyrosyl-tRNA synthetase, putative [Oceanibulbus indolifex HEL-45]
          Length = 416

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 207/412 (50%), Positives = 280/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+  + +RGF+   ++ + LD    +G   AY+GYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFIHTMMQRGFLADCTDYQGLDEALMKGAAPAYVGYDATAKSLHVGHLVNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++  + I +NIE I+ +F+ ++ YG   +DAL
Sbjct: 66  KFGGKPITLMGGGTTKVGDPSFRSDERPLLTPEAIDDNIEGIRQVFARYLDYGDRPSDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 MELHRRYGCVLQMGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EINEAK  +A 
Sbjct: 246 VWLNGDMLSPYEFWQFWRNCTDADVGRFLKLYTELPVDECDRLGALAGSEINEAKVRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A  A   A E F+       +PT+++S  +V  G+ ++ L+VK+G A S
Sbjct: 306 EVTGLLHGEEAARNAEATAREVFEKGGVGDDLPTLTLSAADVGDGVSIVQLLVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +I++  +++  + +      S   IKLS GKK H +  +
Sbjct: 366 GKEAKRLIAENGARIDDQPLTDAGMMLDAGALSSP--IKLSAGKKRHALVQI 415


>gi|29376289|ref|NP_815443.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227518928|ref|ZP_03948977.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227553547|ref|ZP_03983596.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229545650|ref|ZP_04434375.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229549841|ref|ZP_04438566.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972568|ref|ZP_05423154.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255975679|ref|ZP_05426265.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256619232|ref|ZP_05476078.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256762724|ref|ZP_05503304.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256853292|ref|ZP_05558662.1| tyrosyl-tRNA synthetase 2 [Enterococcus faecalis T8]
 gi|256959147|ref|ZP_05563318.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256961758|ref|ZP_05565929.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964956|ref|ZP_05569127.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257079180|ref|ZP_05573541.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257082385|ref|ZP_05576746.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257087023|ref|ZP_05581384.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257090052|ref|ZP_05584413.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257416258|ref|ZP_05593252.1| tyrosyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|293383465|ref|ZP_06629378.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388881|ref|ZP_06633366.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|294779395|ref|ZP_06744796.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300860962|ref|ZP_07107049.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307269549|ref|ZP_07550888.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307273052|ref|ZP_07554298.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307275801|ref|ZP_07556940.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307277896|ref|ZP_07558980.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289276|ref|ZP_07569232.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307291824|ref|ZP_07571695.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312901857|ref|ZP_07761122.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312903486|ref|ZP_07762666.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312907706|ref|ZP_07766697.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910324|ref|ZP_07769171.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|312951668|ref|ZP_07770563.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|81436930|sp|Q834C7|SYY2_ENTFA RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|29343752|gb|AAO81513.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227073617|gb|EEI11580.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227177325|gb|EEI58297.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229305110|gb|EEN71106.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229309218|gb|EEN75205.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255963586|gb|EET96062.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255968551|gb|EET99173.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256598759|gb|EEU17935.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256683975|gb|EEU23670.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256711751|gb|EEU26789.1| tyrosyl-tRNA synthetase 2 [Enterococcus faecalis T8]
 gi|256949643|gb|EEU66275.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256952254|gb|EEU68886.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256955452|gb|EEU72084.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256987210|gb|EEU74512.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256990415|gb|EEU77717.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256995053|gb|EEU82355.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256998864|gb|EEU85384.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257158086|gb|EEU88046.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|291079256|gb|EFE16620.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081662|gb|EFE18625.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|294453524|gb|EFG21925.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113116|emb|CBL31753.1| tyrosyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300850001|gb|EFK77751.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306497090|gb|EFM66636.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306499985|gb|EFM69346.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505293|gb|EFM74479.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507493|gb|EFM76624.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306510037|gb|EFM79061.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306514169|gb|EFM82745.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310626734|gb|EFQ10017.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310630385|gb|EFQ13668.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310633362|gb|EFQ16645.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311289597|gb|EFQ68153.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291050|gb|EFQ69606.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315027894|gb|EFT39826.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315029529|gb|EFT41461.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315032002|gb|EFT43934.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315037150|gb|EFT49082.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315144977|gb|EFT88993.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315147433|gb|EFT91449.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315149853|gb|EFT93869.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315152311|gb|EFT96327.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315158246|gb|EFU02263.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315162444|gb|EFU06461.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315163890|gb|EFU07907.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315167302|gb|EFU11319.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315169629|gb|EFU13646.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315576051|gb|EFU88242.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315577818|gb|EFU90009.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315580626|gb|EFU92817.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|323480896|gb|ADX80335.1| tyrosyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327535302|gb|AEA94136.1| tyrosine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329571864|gb|EGG53542.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 420

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 157/421 (37%), Positives = 225/421 (53%), Gaps = 11/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   
Sbjct: 1   MNSAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A
Sbjct: 61  QQNGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYD
Sbjct: 121 ILANNYDWLGELSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F++L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   
Sbjct: 179 FLKLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGN 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DVV F K  T L + EI               A+K 
Sbjct: 239 AVWLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRAAQKA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLT 354
           +A E+TT+VHG     +A   +   F   I S     I     +V          + L+ 
Sbjct: 299 LAKEVTTLVHGEAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPEDQLSLVD 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +    S  +AR  +++ AI +N     +   ++   D        +  GKK + + 
Sbjct: 359 LLVTSKIEPSKRQAREDVQNGAIYVNGERRQDLAAELTETDKIEGQFTVIRRGKKKYFLL 418

Query: 415 H 415
            
Sbjct: 419 K 419


>gi|154483552|ref|ZP_02026000.1| hypothetical protein EUBVEN_01256 [Eubacterium ventriosum ATCC
           27560]
 gi|149735462|gb|EDM51348.1| hypothetical protein EUBVEN_01256 [Eubacterium ventriosum ATCC
           27560]
          Length = 408

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 178/409 (43%), Positives = 251/409 (61%), Gaps = 4/409 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I Q+++   +  L ++G    YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   NTYEELKARGLIAQVTDEERISDLINKGEAVFYIGFDPTADSLHVGHFMALCLMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT++IGDPS + + R+MM  + I  N+E  K   S FI +  G   AL++
Sbjct: 62  GNKPIALIGGGTAMIGDPSGKTDMRKMMTKETINHNVECFKKQMSKFIDFSDG--KALLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID+LRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  
Sbjct: 120 NNADWLLDLNYIDVLREVGPHFSVNRMLTAECYKQRM--ERGLSFLEFNYMIMQSYDFYR 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K+Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT+SGA+W
Sbjct: 178 LYKDYGCNLQFGGDDQWSNMLGGTELIRRKLGEDASAMTITLLLNSEGKKMGKTVSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSP+ F+QYWRN+DDADVV   K LT LP+ EI++M + QG E+N+AK+I+A E 
Sbjct: 238 LDAEKTSPFEFYQYWRNVDDADVVKCLKMLTFLPLEEIEKMEQWQGSELNKAKEILAYEH 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEAEKA  A+   F     +  +PT + +K ++  G  +LTL+V    A S  
Sbjct: 298 TKLVHGEEEAEKAQIASRNLFAGGGVTGDIPTTTYAKADLDEGKDILTLLVDTKLAASRG 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR ++   + +N   ++         +F+    + +  GKK++    
Sbjct: 358 EARRLVQQGGVSVNGEKVAAIDKTFTTAEFNEEAALLIKKGKKSYHQIK 406


>gi|238919992|ref|YP_002933507.1| tyrosyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238869561|gb|ACR69272.1| tyrosyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 428

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 148/418 (35%), Positives = 226/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGSIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKATERKLNTEETVQGWVDKIRHQVAPFLDFDCGSNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKTSGKAPRAQYVL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG    E A       F  S+          +    +   E+ +G  L   +
Sbjct: 308 AEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGMPMIEMDKGADLQQAL 367

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR+ + SNA+ +N    S+ +      D   +    L  GKKN+ + 
Sbjct: 368 VDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFSRYTLLRRGKKNYCLI 425


>gi|284007966|emb|CBA73966.1| tyrosyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 429

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 154/419 (36%), Positives = 237/419 (56%), Gaps = 9/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +  L ERG I Q+++ + L    SQG VT Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 9   KNLIEQLQERGLIAQLTDEKALIEKLSQGSVTLYCGFDPTADSLHLGHLVPLLCLKRFQQ 68

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  S+ +Q+ +EKI+   S F+ +  G   A +
Sbjct: 69  MGHQPVALVGGATGLIGDPSFKATERKLNTSETVQQWVEKIRQQVSPFLDFDCGNNSAKV 128

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
           +NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL+R+   +SF EF+Y +LQ+YDF
Sbjct: 129 VNNYDWFGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLERDDAGISFTEFSYNLLQSYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   ++  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +GA
Sbjct: 189 ANLCYQHNVELQIGGSDQWGNITSGIDLTRRLFQKQVFGLTVPLITKSDGTKFGKTEAGA 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T +P+ EID  +       +   A+ ++
Sbjct: 249 VWLDPQKTSPYKFYQFWVNTADADVYRFLKFFTFMPIEEIDALQEEDQNSGKAPRAQYVL 308

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  +I          +    +   +++ G  L   +
Sbjct: 309 AEKVTQLVHGDEGLQAAKRITESLFSDTIAALTAADFAQLAQDGMPMIKLNSGADLQQAL 368

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V+A    S  +AR  + S A+ IN     + +     +D        +  GKK++ + +
Sbjct: 369 VEAKLVPSRGQARTMISSKAVAINGEKCVDPEYIFTAEDRLFGRYSLIRRGKKHYCLVN 427


>gi|257085018|ref|ZP_05579379.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257422395|ref|ZP_05599385.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|256993048|gb|EEU80350.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257164219|gb|EEU94179.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315156112|gb|EFU00129.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315172203|gb|EFU16220.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 420

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 157/421 (37%), Positives = 225/421 (53%), Gaps = 11/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   
Sbjct: 1   MNSAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A
Sbjct: 61  QQNGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYD
Sbjct: 121 ILANNYDWLGELSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F++L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   
Sbjct: 179 FLKLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGN 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DVV F K  T L + EI               A+K 
Sbjct: 239 AVWLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRAAQKA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLT 354
           +A E+TT+VHG     +A   +   F   I S     I     +V          + L+ 
Sbjct: 299 LAKEVTTLVHGEAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPEDQLSLVD 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +    S  +AR  +++ AI +N     +   ++   D        +  GKK + + 
Sbjct: 359 LLVTSKIEPSKRQAREDVQNGAIYVNGERKQDLAAELTETDKIEGQFTVIRRGKKKYFLL 418

Query: 415 H 415
            
Sbjct: 419 K 419


>gi|229586879|ref|YP_002845380.1| tyrosyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259517013|sp|C3PNX7|SYY_RICAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|228021929|gb|ACP53637.1| Tyrosyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 411

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 280/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKIVSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + K+ +  G+    L  +AG  TS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEKEVLQAGISAYELFHEAGLVTSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|308186734|ref|YP_003930865.1| Tyrosyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057244|gb|ADO09416.1| Tyrosyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 424

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 152/424 (35%), Positives = 227/424 (53%), Gaps = 11/424 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIQQLQERGLIAQVTDEDALTEKLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P++L+GG T +IGDPSF+   R++  S  + E +EKI+   + F+ +  G 
Sbjct: 59  KRFQDAGHQPVALVGGATGLIGDPSFKAAERKLNTSDTVNEWVEKIRQQVAPFLDFDCGS 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +L
Sbjct: 119 NSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF  L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GK
Sbjct: 179 QGYDFACLNERHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T L + EI               
Sbjct: 239 TEGGAVWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEISALEEEDKNSGTAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMG 351
           A+ ++A ++T +VHG      A       F  S+        + +    +    +     
Sbjct: 299 AQYVLAEQVTRLVHGEAGLSAAKRITASLFSGSVSDMTEADFEQLAQDGMPTIVLGADDD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +VKA    S  +AR  + SNA+ +N    S+ + +    D        L  GKK++
Sbjct: 359 LQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSDKLFNRFTLLRRGKKHY 418

Query: 412 IICH 415
            + +
Sbjct: 419 CLIN 422


>gi|291617328|ref|YP_003520070.1| TyrS [Pantoea ananatis LMG 20103]
 gi|291152358|gb|ADD76942.1| TyrS [Pantoea ananatis LMG 20103]
 gi|327393773|dbj|BAK11195.1| tyrosyl-tRNA synthetase TyrS [Pantoea ananatis AJ13355]
          Length = 438

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 157/429 (36%), Positives = 232/429 (54%), Gaps = 21/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 15  MTS--SNLIQQLQERGLIAQVTDEDALVEKLAQGPISLYCGFDPTADSLHLGHLVPLLCL 72

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+   R++  S+ + E +EKI+   + F+ +  G 
Sbjct: 73  KRFQDAGHKPVALVGGATGLIGDPSFKAAERKLNTSETVGEWVEKIRTQVAPFLDFDCGA 132

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +L
Sbjct: 133 NSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLL 192

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF  L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GK
Sbjct: 193 QGYDFACLNALHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGK 252

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T L + EI               
Sbjct: 253 TEGGAVWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEIHALEEEDKNSGTAPR 312

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM-----------SIHSQHMPTISISKDEV 346
           A+ ++A ++T +VHG E    A       F              +    MPTI++S ++ 
Sbjct: 313 AQYVLAEQVTRLVHGEEGLAAAKRITESLFSGALSDMTEADFEQLAQDGMPTITLSAED- 371

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                L   +VKA    S  +AR  + SNA+ +N    S+ + +    D        L  
Sbjct: 372 ----DLQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSDKLFNRFTLLRR 427

Query: 407 GKKNHIICH 415
           GKK++ + +
Sbjct: 428 GKKHYCLIN 436


>gi|114328610|ref|YP_745768.1| tyrosyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114316784|gb|ABI62844.1| tyrosyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 431

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 203/415 (48%), Positives = 280/415 (67%), Gaps = 3/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S FL     RGF+ Q ++   LD   S G V+AY G+D TA SLH GH+ Q+MLL
Sbjct: 18  MS--RSAFLREAEARGFLFQCTDQEALDNALSNGTVSAYTGFDCTADSLHVGHMMQIMLL 75

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P+ L+GGGT+ IGDPSFR+E+R+++   +I  N++ I+     F+ +GTG 
Sbjct: 76  RLLQRHGHRPVVLLGGGTTRIGDPSFREEARQLLTDAQIAANMDGIRANIEPFLTFGTGP 135

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WL ++ YI++LRE+G  FS+NRMLSF+SVR+RL+REQ L+FLEFNY ILQ
Sbjct: 136 TDATLVNNADWLDTLGYIEILREVGVHFSINRMLSFDSVRTRLEREQGLTFLEFNYSILQ 195

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF EL +     LQ GGSDQW NII G+DL  R    ++F  T+PL+TTASG KMGKT
Sbjct: 196 SYDFRELNRRLGVTLQFGGSDQWSNIISGVDLVRRTDGKQVFGFTAPLVTTASGAKMGKT 255

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL  E  SPY++WQ+WRN +DADV  F +  T LP+ EI R+A LQG EINEAKK
Sbjct: 256 AKGAVWLTAEKLSPYDYWQFWRNTEDADVGRFLRLFTELPLDEIGRLAALQGAEINEAKK 315

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T ++HGRE AE AA  A   F+    +  +P+++I+  E++ G+ +L  +  AG
Sbjct: 316 ILATEATGILHGRESAEAAAETARRAFEQGEAADTLPSVAIAASELAEGLPILRALTVAG 375

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR ++    ++NN  +++E L++   D    G IKLS G+K H +  
Sbjct: 376 LAQSNGEARRLIRGGGARVNNEAVTDEMLKLSPADL-QDGAIKLSAGRKQHRLLK 429


>gi|269126394|ref|YP_003299764.1| tyrosyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311352|gb|ACY97726.1| tyrosyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 425

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 232/424 (54%), Gaps = 13/424 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L+ R  I Q ++  EL  L + G VT Y G+D TA SLH G+L Q++ L   Q
Sbjct: 1   MTDVLEDLAWRDLIAQSTDLDELRALLAAGPVTLYCGFDPTAPSLHLGNLIQILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI L+GG T +IGDPS +   R +   + +   +E+I+   + F+ +  G   AL
Sbjct: 61  LAGHRPIGLVGGATGLIGDPSGKSAERTLNSEEVVAAWVERIRAQVAKFLDFE-GPNAAL 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  W   +  I+ LR+IG  F VNRML+ E+V++RL+    +S+ EF+Y++LQA DF
Sbjct: 120 MVSNLEWTGPMTAIEFLRDIGKHFPVNRMLARETVKTRLETT-GMSYTEFSYVLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SG 243
           +EL + Y CRLQ GGSDQWGN+  G+DL  R++     ALT+PLLT A GTK GKT    
Sbjct: 179 LELYRRYGCRLQTGGSDQWGNLTAGVDLIRRVEGGTAHALTTPLLTKADGTKFGKTAGGE 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
             WL+ E+TSPY F+Q+W N DD DV  + K  +  P  EI +      +      A++ 
Sbjct: 239 TYWLDPELTSPYAFYQFWINADDRDVEKYLKVFSFRPREEIQQLVKESAERPAARIAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG--MGLL 353
           +A E+TT+VHG +E  K   A+   F      +            + + E+  G    ++
Sbjct: 299 LAEEVTTLVHGADECAKVVAASRALFGQGALEELDERTLGAALAEVPRMEIPPGDLPPVV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+  +G   S +EARR +      +NN+ +++E+     +D      + L  GK+N   
Sbjct: 359 DLLAGSGLCKSKSEARRTIAQGGAYLNNTKVTSEEAVPTTEDLLHGRFLVLRRGKRNVGG 418

Query: 414 CHLC 417
             + 
Sbjct: 419 VEVV 422


>gi|134284884|gb|ABO69544.1| TyrS [Magnetospirillum gryphiswaldense MSR-1]
          Length = 416

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 208/415 (50%), Positives = 286/415 (68%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S+FL +++ERG++HQ ++   LD   +QG   AYIG+D TA SLH G L Q+MLL
Sbjct: 1   MTTARSEFLRVVAERGYMHQCTDLEALDKRLNQGPAAAYIGFDCTAESLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTG+KPI LMGGGT+ IGDP+ +DE+R+M+    I  N+  IK +F+ ++ +G G 
Sbjct: 61  RWWQKTGNKPIVLMGGGTTRIGDPTGKDEARKMLDDAAIARNMAGIKQVFAKYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 121 TDAMMVNNADWLDQLNYISFLRDYGKHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF EL   + C LQMGGSDQWGNII G++LG R+   +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFAELWSRHKCVLQMGGSDQWGNIINGVELGRRVHQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+  LQG EINEAKK
Sbjct: 241 VGGAVWLNADMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG + A +AA  A + F+    + ++PTI+I   +++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGEDAAREAAETARKTFEEGALADNLPTIAIPAADLNAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +TS  EARR L+    ++N++ +++    I   D    G IKL+ GKK +++  
Sbjct: 361 LSTSNGEARRLLQQGGGRVNDAQVTDPAAPIGA-DALKDGVIKLTAGKKRNVLVK 414


>gi|154253705|ref|YP_001414529.1| tyrosyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157655|gb|ABS64872.1| tyrosyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 416

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 233/415 (56%), Positives = 295/415 (71%), Gaps = 2/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L  RGFIHQ S+   LD + +  V+T YIGYD TA SLH GHL Q+M+L
Sbjct: 1   MAKFKSDFLRELEARGFIHQQSDAGALDEIAATRVLTGYIGYDCTAPSLHVGHLMQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTG KPI+LMGGGT+ IGDPSFRDE+R ++  ++I EN+  IK +FS F+ +G G+
Sbjct: 61  RWLQKTGGKPIALMGGGTTRIGDPSFRDEARPLLTDEKIDENLAGIKNVFSKFLDFGAGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+M+NN  WL  ++YID LR+ G  FSVNRMLSF+SV+ RL REQ+LSFLEFNYMILQ
Sbjct: 121 TGAIMVNNRDWLDKLQYIDFLRDYGRHFSVNRMLSFDSVKLRLDREQNLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL + Y C LQMGGSDQWGNI+ GI+L  R    ++F LTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELNRQYGCELQMGGSDQWGNIVNGIELARRTAGAQVFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN +M SPY +WQYWRN +DADV  F K  T LP+SEI R   L G EINEAKK
Sbjct: 241 ASGAVWLNADMLSPYEYWQYWRNAEDADVGRFLKLFTELPLSEIARFEALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T MVHGR EAEKAA AA   F+    S  +PT+   +     G+      V+AG
Sbjct: 301 VLATETTAMVHGRAEAEKAAEAARTAFEEGAISADLPTVETGELAGGLGLLTAL--VQAG 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST++ARR +K  A+++N++ +++EK+ +  +     G +KLS GKK H++  
Sbjct: 359 LCASTSDARRQIKGGAVRVNDAAVADEKMVLNRESLTGDGVVKLSLGKKKHVLLR 413


>gi|126739432|ref|ZP_01755125.1| tyrosyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719532|gb|EBA16241.1| tyrosyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 418

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 213/413 (51%), Positives = 278/413 (67%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFVAVMMERGFLADCTDYQGLDEALMQGVKPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++    I  NI  IK +F+++I Y T     A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLDEAAINANIAGIKKVFAAYIDYDTDAPNKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+    +F LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDNSIFGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN+AK ++A
Sbjct: 246 AVWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTELPIDECERLGALAGSEINDAKIVLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T + HG E A  A   + E F+       +PT+S+S  ++  G+ ++ LIVK+G A 
Sbjct: 306 NEVTKLCHGAEAALAAEATSREVFEKGGVGDDLPTLSLSPADLGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  KI++  +++  L +      S   IKLS GKK H +  L
Sbjct: 366 SGKEAKRLISENGAKIDDQPLTDAGLMLDAGALSSP--IKLSAGKKRHALVQL 416


>gi|15892746|ref|NP_360460.1| tyrosyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|25009439|sp|Q92HE8|SYY_RICCN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|15619924|gb|AAL03361.1| tyrosyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 411

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 281/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKKHILVRV 411


>gi|83593367|ref|YP_427119.1| tyrosyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|97201869|sp|Q2RSR3|SYY_RHORT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83576281|gb|ABC22832.1| tyrosyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 418

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 210/416 (50%), Positives = 282/416 (67%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A KS+FL+++ +RGFIHQ ++   LD L ++G V+AYIG+D TA SLH G L Q+MLL
Sbjct: 1   MTAPKSEFLAVVRDRGFIHQCTDLDGLDALLAKGPVSAYIGFDCTADSLHVGSLIQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P+ LMGGGT+ IGDPSFRDE+R ++  ++I +N+  I+ +FS F+ +G G 
Sbjct: 61  HWLQRTGHRPVVLMGGGTTRIGDPSFRDEARPLLTDEKIGQNMAGIRQVFSRFLSFGEGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  FSVNRML+F+SVR RL REQ LSFLEFNYMILQ
Sbjct: 121 TDAVMVNNADWLDGLAYIPFLRDFGRHFSVNRMLTFDSVRLRLDREQPLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL +    RLQMGGSDQWGNI+ G++LG R+   +LF LTSPL+TTASG KMGKT
Sbjct: 181 AYDFLELGRRTGVRLQMGGSDQWGNIVNGVELGRRVDGLELFGLTSPLITTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN+     Y++WQ+WRN +DADV  F +  T LP+ E+ R+  L G EINEAKK
Sbjct: 241 AQGAVWLNEARLPAYDYWQFWRNTEDADVGRFLRLFTDLPLDEVARLEALGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A   TTM HG E A  AA  A + F+       +PT  ++ + ++ G+ L  ++   G
Sbjct: 301 ILAERATTMAHGPEAALTAAETARKVFEQGGTGDALPTHDVAAEALAAGLPLAEMMRATG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A S  E +R +     +IN+  +S+    +   D    G IKLS GKK H +  +
Sbjct: 361 LAASGKEVKRLVSEGGARINDVAVSDAARLLGPAD-VQDGAIKLSAGKKRHALIRV 415


>gi|90577965|ref|ZP_01233776.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
 gi|90441051|gb|EAS66231.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
          Length = 430

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 230/417 (55%), Gaps = 9/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L +RG I QI++   L    ++G +T Y G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 11  NLIQELKDRGLIAQITDEEALSERLAKGPITLYCGFDPTADSLHLGHLVPLLCLKRFQEA 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P++L+GG T +IGDPSF+   R +     +   + KI+   S F+ +      A M+
Sbjct: 71  GHNPVALVGGATGMIGDPSFKATERSLNTLDTVAGWVAKIQRQVSPFLDFDNATNPARMV 130

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W  ++  +  LR+IG  FSVN+M+S ESV+ R+ R++  +SF EF Y +LQ+YDF 
Sbjct: 131 NNHDWFGNMDVLTFLRDIGKHFSVNQMISKESVKQRINRDEVGISFTEFAYSLLQSYDFA 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            + K     LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA+
Sbjct: 191 SMNKEMGMELQIGGSDQWGNITAGIDLTRRMNQQQVFGMTVPLITKSDGTKFGKTEGGAV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIA 303
           WL+   TSPY F+Q+W N  DADV  F +  T L   EI ++ +      +  EA++I+A
Sbjct: 251 WLDPSKTSPYKFYQFWMNTADADVYRFLRFFTFLSEEEIQQIEEADRNSGKAPEAQRILA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIV 357
            + T +VHG+E+ E A       F+  +          +    +   E   G  L  ++V
Sbjct: 311 EQTTRLVHGQEQLEAAQNITRCLFENDLAHLSESDFAQLAQDGMPSAEAENGDDLQQVLV 370

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           K+G A+S  +A+ H+ SNAI +N   +S    +    D        +  GKKN+ + 
Sbjct: 371 KSGLASSRGQAKTHISSNAIMVNGEKVSEPFYEFTDADKLFGRYTLIRRGKKNYSLI 427


>gi|257419462|ref|ZP_05596456.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257161290|gb|EEU91250.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 420

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 157/421 (37%), Positives = 226/421 (53%), Gaps = 11/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   
Sbjct: 1   MNSAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A
Sbjct: 61  QQNGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYD
Sbjct: 121 ILANNYDWLGGLSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F++L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   
Sbjct: 179 FLKLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGN 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DVV F K  T L + EI               A+K 
Sbjct: 239 AVWLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRAAQKA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLT 354
           +A E+TT+VHG+    +A   +   F   I S     I     +V          + L+ 
Sbjct: 299 LAKEVTTLVHGKAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPEDQLSLVD 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +    S  +AR  +++ AI +N     +   ++   D        +  GKK + + 
Sbjct: 359 LLVTSKIEPSKRQAREDVQNGAIYVNGERRQDLAAELTETDKIEGQFTVIRRGKKKYFLL 418

Query: 415 H 415
            
Sbjct: 419 K 419


>gi|254487653|ref|ZP_05100858.1| tyrosyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044522|gb|EEB85160.1| tyrosyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 416

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 284/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+ I+ ERGF+   ++ + LD    +G   AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSEFIRIMMERGFVADCTDYQGLDEALLKGAQPAYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPSFR + R ++ S++I +NI  IK +FS+++ YG G +DA 
Sbjct: 66  KTGGKPITLMGGGTTKVGDPSFRADERPLLTSEQIDDNISGIKKVFSAYLTYGDGPSDAQ 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MINNAEWLDGLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+ SGA
Sbjct: 186 MELHRRYGCILQMGGSDQWGNIVNGIDLTRRVIDGEVYGLTTPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L+G EINEAK  +A 
Sbjct: 246 IWLNPDMLSPYEFWQFWRNTTDADVGRFLKLYTELPIDECDRLGALEGSEINEAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG + A  A   A E F+       +PT+++S  ++  GM ++ LIVK+G A S
Sbjct: 306 EVTALLHGADAAAAAEATAREVFEKGGVGDDLPTLTLSPSDIGDGMSIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +IN+  +++  + I          IKLS GKK H +  L
Sbjct: 366 GKEAKRLISENGARINDEPLTDAGMMIDAAAL--ETPIKLSAGKKRHALVQL 415


>gi|317047943|ref|YP_004115591.1| tyrosyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949560|gb|ADU69035.1| tyrosyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 424

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 234/429 (54%), Gaps = 21/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIQQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   + F+ +  G 
Sbjct: 59  KRFQDAGHKPVALVGGATGLIGDPSFKAAERKLNTTETVGEWVEKIRHQVAPFLSFDCGD 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +Q +S+ EF+Y +L
Sbjct: 119 NSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISYTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF EL K Y   LQ+GGSDQWGNI  GIDL  RL   + + LT PL+T + GTK GK
Sbjct: 179 QGYDFAELNKRYGVVLQIGGSDQWGNITSGIDLTRRLHQQQTWGLTVPLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + +          
Sbjct: 239 TEGGAVWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEQDKNSGTAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEV 346
           A+ ++A ++T +VHG      A       F  S+               MPTI++S ++ 
Sbjct: 299 AQYVLAEQVTRLVHGEAGLTAAKRITESLFSGSLSDMTEADFEQLAQDGMPTINLSAED- 357

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                L   +VKA    S  +AR  + SNA+ +N    S+ + +    D        L  
Sbjct: 358 ----DLQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSDKLFGRFTLLRR 413

Query: 407 GKKNHIICH 415
           GKK++ + +
Sbjct: 414 GKKHYCLIN 422


>gi|83951809|ref|ZP_00960541.1| tyrosyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836815|gb|EAP76112.1| tyrosyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 417

 Score =  384 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 285/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+SI+  RGF+   ++ + LD     GVV +YIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFISIMISRGFLADCTDYQGLDEAMQAGVVPSYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K+GHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI  +  +FS ++ YG G+TDA+
Sbjct: 66  KSGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIRGMGQVFSRYLSYGEGETDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L G EINEAK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGRFLKLYTELPVEECDRLGALAGSEINEAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A+ A   A E F+       +PT+++S  E+  G+ ++ L+VK G A S
Sbjct: 306 EVTALLHGAEAAQAAQDTAREVFEKGGVGDDLPTVTLSPAEIEGGISVVQLLVKTGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +++++ +++  L +    F +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLISENGARLDDAPLTDAGLMLDSGAFAAP--IKLSAGKKRHALVKL 415


>gi|238650336|ref|YP_002916188.1| tyrosyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259517015|sp|C4K0N9|SYY_RICPU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|238624434|gb|ACR47140.1| tyrosyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 411

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 282/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVADENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|149913839|ref|ZP_01902371.1| tyrosyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149812123|gb|EDM71954.1| tyrosyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 416

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 216/413 (52%), Positives = 284/413 (68%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERGF+   ++ + LD   + G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMIERGFLADCTDLQALDDSLTSGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ ++ YG     AL
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLDEAQIAENIGGMQQVFARYLDYGDTAPGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  +KYI+ LR+IG +FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLKYIEFLRDIGRYFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTTA G KMGK+  GA
Sbjct: 186 LELNRRYGCTLQMGGSDQWGNIVNGIDLTRRVVAHEVYGLTSPLLTTADGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR++ L G EIN AK I+A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTLDADVGRFLKLYTELPVEECDRLSALAGSEINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG + A  A   A E F+       +PT+ ++ DE++ GM ++ L V+ G A S
Sbjct: 306 EVTTLLHGADAARTAEATAREVFEKGGVGDDLPTLELTMDELAEGMSIVQLFVRTGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             +A+R +     +I+++ +++  L I      S   IKLS GKK H +  L 
Sbjct: 366 GKDAKRLIAEQGARIDDAPLTDSGLMIDAAALASP--IKLSAGKKRHALVKLA 416


>gi|257875423|ref|ZP_05655076.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257809589|gb|EEV38409.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 420

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 156/421 (37%), Positives = 233/421 (55%), Gaps = 11/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   
Sbjct: 1   MSTDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A
Sbjct: 61  QQNGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYD
Sbjct: 121 IIANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   
Sbjct: 179 FLNLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGN 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ + T+PY F+Q+W N DD D V F K  T L + EI           E   A+K 
Sbjct: 239 AVWLDAKKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEAEFNAAPESRAAQKA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV--SRGMGLLT 354
           +A E+TT+VHG E  E+A   +   F  +I   +   I      +   +V     + ++ 
Sbjct: 299 LAKEVTTLVHGAEAYEQAVRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADDSLNIVE 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A    S  +AR  +++ AI IN   + +   +++  D      + +  GKK + + 
Sbjct: 359 VLTTAKIEPSKRQAREDVQNGAIYINGERVQDLTYELQASDRIGGKYVVIRRGKKKYFLL 418

Query: 415 H 415
            
Sbjct: 419 T 419


>gi|157828692|ref|YP_001494934.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933412|ref|YP_001650201.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|189029765|sp|B0BY69|SYY_RICRO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029766|sp|A8GSQ1|SYY_RICRS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157801173|gb|ABV76426.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908499|gb|ABY72795.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 411

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 282/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFYEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVADENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|326391203|ref|ZP_08212747.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992772|gb|EGD51220.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 406

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 183/410 (44%), Positives = 259/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK 
Sbjct: 2   SVLDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  G   A+M 
Sbjct: 62  GHRPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSNG--KAIMA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 120 NNADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRL--ERGLSFLEFNYMLMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+W
Sbjct: 178 LNRRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+
Sbjct: 238 LDPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +
Sbjct: 298 TKLIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + INN  + +    IK  D     +I +  GKK +    +
Sbjct: 356 EGRRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEYHRLVI 404


>gi|257865795|ref|ZP_05645448.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257872130|ref|ZP_05651783.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799729|gb|EEV28781.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257806294|gb|EEV35116.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 420

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 156/421 (37%), Positives = 233/421 (55%), Gaps = 11/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   
Sbjct: 1   MSTDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A
Sbjct: 61  QQNGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYD
Sbjct: 121 IIANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   
Sbjct: 179 FLNLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGN 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ + T+PY F+Q+W N DD D V F K  T L + EI           E   A+K 
Sbjct: 239 AVWLDAKKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEAEFNAAPESRAAQKA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV--SRGMGLLT 354
           +A E+TT+VHG E  E+A   +   F  +I   +   I      +   +V     + ++ 
Sbjct: 299 LAKEVTTLVHGAEAYEQALRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADDSLNIVE 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A    S  +AR  +++ AI IN   + +   +++  D      + +  GKK + + 
Sbjct: 359 VLTTAKIEPSKRQAREDVQNGAIYINGERVQDLTYELQASDRIGGKYVVIRRGKKKYFLL 418

Query: 415 H 415
            
Sbjct: 419 T 419


>gi|239946891|ref|ZP_04698644.1| tyrosyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921167|gb|EER21191.1| tyrosyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 411

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 189/410 (46%), Positives = 279/410 (68%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ 
Sbjct: 2   SFIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQY 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI ++GGGTS IGDPS +DE+R+ +   +I+ N E IK   S FIK+G GK+DA+ML
Sbjct: 62  GHKPIVIIGGGTSKIGDPSGKDEARKALTKDDIKRNAEGIKKSLSKFIKFGDGKSDAIML 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  
Sbjct: 122 DNAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYY 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L+K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT  GA+W
Sbjct: 182 LSKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAVGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           LN+++ SPY+++QYWRN +DADV+ FAK  + L   E+++   L  ++IN AKK +A E+
Sbjct: 242 LNEDLLSPYDYYQYWRNCEDADVIRFAKLYSELTSEELNKFESLAAEDINAAKKQLAYEL 301

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +
Sbjct: 302 TKLCHSEQAAKSALKTAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKS 361

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E R+ ++    KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 362 ETRKLIRGKGAKINDELVADENMIINTNFLLDKNVIKLSAGKKRHILVRI 411


>gi|325663618|ref|ZP_08152025.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331087136|ref|ZP_08336207.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470304|gb|EGC73536.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330409105|gb|EGG88562.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 407

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 179/408 (43%), Positives = 249/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELKARGLIAQVTDEELISNLINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  G   A+M+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 121 NADWLLDLNYIELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRNI DADV+   + LT LP+ EID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNIADADVLKCIRMLTFLPLEEIDAMDKWEGSQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  ++   F    ++ +MPT  + + + + G + +LTL+VK+G   S +
Sbjct: 299 KLVHGEEEAVKAQESSRALFSSG-NAANMPTAELEESDFTEGMIDILTLLVKSGLVPSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR ++   + +N   + + K     + F    +  L  GKKN    
Sbjct: 358 EARRAVQQGGVSVNGEKVEDIKTAYAPETF-DGEDFVLKRGKKNFRKI 404


>gi|157964687|ref|YP_001499511.1| tyrosyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|189029764|sp|A8F228|SYY_RICM5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157844463|gb|ABV84964.1| Tyrosyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 411

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 281/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFEILAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKNVIKLSAGKKRHILVRV 411


>gi|291542996|emb|CBL16106.1| tyrosyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 408

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 177/411 (43%), Positives = 259/411 (63%), Gaps = 6/411 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VYEELVARGLIAQVTDQEEIRELVNSGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R+MM  + IQ N++  K   S FI +  G   AL++N
Sbjct: 63  NKPIALVGGGTGMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSRFIDFSDG--KALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVELLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKNAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSPY+F+QYWRN+DD DV+   K LT LP+ EID +AKL+G EIN+AK+I+A E+T
Sbjct: 239 SAEKTSPYDFYQYWRNVDDGDVIKCLKMLTFLPLEEIDELAKLEGSEINKAKEILAHELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG+EEA+KA  AA   F    ++ +MP+ ++++ + + G +G+L L+ K G   S  
Sbjct: 299 ELVHGKEEADKAQEAARAIFSNKTNTDNMPSTTLTEADFADGEIGILDLMKKCGLIPSNG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E RR ++   + +++  +++   ++   DF+    + +  GKK +    L 
Sbjct: 359 EGRRLIQQGGVSVDDEKVTDVYAKVAKSDFEKG-YVVIKKGKKVYHKAILV 408


>gi|317132187|ref|YP_004091501.1| tyrosyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470166|gb|ADU26770.1| tyrosyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 408

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 166/410 (40%), Positives = 257/410 (62%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ RG I Q ++  ++  L + G VT YIG+D TA SLH GH  Q++++  +Q+ G
Sbjct: 3   VYEELTARGLIAQTTDEEKVRELVNGGPVTFYIGFDPTADSLHVGHFLQMVIMAHMQRAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P++++GGGT ++GDP+ R + R+M+  + I+ NI + K     FI +  G   ALM+N
Sbjct: 63  HRPVAVLGGGTGMVGDPTGRTDMRQMLTPEAIRHNIAQFKKQMERFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LRE+G  FS+NRML+FE  ++R+  E+ LSFLEFNYM++Q+YDF  L
Sbjct: 121 NADWLLSLNYVDFLREVGVHFSINRMLTFECFKTRM--ERGLSFLEFNYMLMQSYDFYRL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +Y C+++ GG DQW NII G++L  +      + +T  LLTT+ G KMGKT  GA+WL
Sbjct: 179 FTDYGCKIEFGGDDQWANIIGGVELIRKKTGNDAYGMTFQLLTTSDGKKMGKTQGGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSPY+F+QYWRN++D++V+   K +T +P+ EI+  + L+G E+N AK+ +A E+T
Sbjct: 239 DPEKTSPYDFYQYWRNVEDSNVIRLLKMITFVPLDEIETFSDLEGSELNRAKERLAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
             VHG+EEA+KA  A    F     + +MP  ++S+ +   G + +L L+V+ G A S  
Sbjct: 299 KQVHGKEEADKAQEATHALFGTGGSNANMPATALSESDFHDGQITILELLVRCGLAPSRG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + +N+  I++        DF +     +  GKK      L
Sbjct: 359 EARRLIEQGGVSVNDRKITSFSQTFAPADFQTD--YIVRKGKKVFHKVTL 406


>gi|226330314|ref|ZP_03805832.1| hypothetical protein PROPEN_04228 [Proteus penneri ATCC 35198]
 gi|225201109|gb|EEG83463.1| hypothetical protein PROPEN_04228 [Proteus penneri ATCC 35198]
          Length = 428

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 152/425 (35%), Positives = 228/425 (53%), Gaps = 11/425 (2%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + ++ L ERG I Q+++   L     QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSKNLITQLQERGLIAQVTDEAALVERLEQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ + +
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVEKIRKQVSPFLDFDS 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A + NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF Y 
Sbjct: 121 GENSAELANNYDWFGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L  +    LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T + GTK 
Sbjct: 181 LLQAYDFASLNTHLGVELQIGGSDQWGNITSGIDLTRRFNQKQVFGMTVPLITKSDGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGQA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRG 349
             A++++A  +T +VHG +    A       F  +I        + +    +   E+ +G
Sbjct: 301 PRAQRVLAELVTGLVHGEDGLIAAKRITESLFSGAIADLTQADLEQLAQDGMPTIELEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN     N +   + +DF       L  GKK
Sbjct: 361 SDLQQALVNAELVPSRGQARTMIGSNAVSINGEKQDNPEYIFEEKDFLFGHYSILRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLV 425


>gi|260433460|ref|ZP_05787431.1| tyrosyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417288|gb|EEX10547.1| tyrosyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 416

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 216/412 (52%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++ + ERGF+   ++ + LD   + GV TAYIGYD TA SLH GHL  +M+L W Q
Sbjct: 6   KSDFIATMIERGFLADCTDYQGLDDALTSGVQTAYIGYDATAQSLHVGHLMNIMVLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F  ++ Y    T AL
Sbjct: 66  KLGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFDKYLSYDDSDTGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DRM  LQG EINEAK  +A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADVGRFLKIFTELPVDECDRMGALQGSEINEAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A KA   A E F+       +PT++++ +++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAAKAEATAREVFEKGGVGGDLPTLTLTAEDLGDGISVVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKLDDAPLTDAGLMIDAAALSSP--IKLSAGKKRHALVQL 415


>gi|168335294|ref|ZP_02693393.1| tyrosyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 410

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 183/411 (44%), Positives = 263/411 (63%), Gaps = 5/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   IL ERGFI Q ++  EL  L     +T YIG+D TA SLH GH   +M +  +Q  
Sbjct: 2   NVFDILEERGFIQQTTHKEELRQLLENEKITFYIGFDPTADSLHVGHFVTIMAMRHMQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+LMGGGT +IGDPS + + R+MM  + I EN+   K  FS FI +      A++ 
Sbjct: 62  GHRPIALMGGGTGMIGDPSGKTDMRKMMSIETINENVNCFKKQFSRFIDFDND--KAIIA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+LLRE+G  FSVNRML+FE  + R+  E+ LSFLEFNYMI+Q+YDF+E
Sbjct: 120 NNADWLMNLNYIELLREVGVHFSVNRMLTFECFKQRM--EKGLSFLEFNYMIMQSYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C+L++GG+DQW NI+ G++L  RL     F +T  LL  + G KMGKT++GA+W
Sbjct: 178 LYRRYNCKLELGGNDQWSNILGGVELVRRLHGDTAFGMTFTLLANSEGQKMGKTVNGALW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+K  TSPY F+QYWRN+DD+DV      LT LPM E++ ++ L+G  IN+AK+I+A E+
Sbjct: 238 LDKNKTSPYEFYQYWRNVDDSDVKMCLSLLTFLPMDEVNHLSSLEGANINKAKEILAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-AGFATST 365
           T +VHG+E+A +A TAA   F        +PT +I++ ++++G+ +++L+V     A S 
Sbjct: 298 TKIVHGQEDAIQAQTAAKAAFSGGAAKGSLPTTNITQTQLNQGIDIISLLVDLTKLAPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EARR +  N IK+    IS+ K  I    F+      +  GKK     +L
Sbjct: 358 GEARRLITQNGIKLEGKTISDIKFIITKDLFNQNNAFMIQKGKKVFHQINL 408


>gi|323137721|ref|ZP_08072797.1| tyrosyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397018|gb|EFX99543.1| tyrosyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 421

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 216/411 (52%), Positives = 297/411 (72%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +SDFL +L ERGF+HQ S+   LD     G + AYIG+D TA SLH G L  +M+L WLQ
Sbjct: 8   RSDFLRVLMERGFVHQCSDFAGLDEKALAGGLPAYIGFDCTAPSLHVGSLLPIMMLAWLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           +TG KP+ LMGGGT+ +GDPS +DESR+++  ++I  N   I+ +F  F+ +G G TDAL
Sbjct: 68  RTGGKPLPLMGGGTTRVGDPSGKDESRKLLTIEQIDANKASIRRVFERFLTFGDGATDAL 127

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ML+N  WL  + YI+ LR++G  FSVNRML+ +SV+ RL+RE  LSF+EFNYM LQAYDF
Sbjct: 128 MLDNAEWLAPLNYIEFLRDVGRHFSVNRMLTMDSVKLRLEREHELSFIEFNYMCLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VE+ + +   LQMGGSDQWGNI+ G+DLG R+ TP+L+ALTSPLLTT+SG KMGKT +GA
Sbjct: 188 VEINRRHGALLQMGGSDQWGNIVTGLDLGRRMGTPQLYALTSPLLTTSSGAKMGKTAAGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY++WQYWRN +DADV  F K  T LPM E+ R+A L+G EINEAKK +AT
Sbjct: 248 VWLNADMLSPYDYWQYWRNTEDADVARFLKLFTFLPMEEVARLAALEGAEINEAKKTLAT 307

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T ++HGRE AE+AA  A   F+    +  +P + +S +E++ G+G+L+  VKAG   S
Sbjct: 308 EATALIHGREAAEQAAETARATFEEGALALSLPKVCVSAEEIAAGLGVLSAFVKAGLVAS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           T EARR +K   +++N+ ++++E+  +  +DF++ G  KLS GKK H++  
Sbjct: 368 TGEARRQIKGGGLRVNDVVVTDERGTLNEKDFETDGVAKLSLGKKKHVLLE 418


>gi|255284138|ref|ZP_05348693.1| tyrosine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265312|gb|EET58517.1| tyrosine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 408

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 177/408 (43%), Positives = 254/408 (62%), Gaps = 4/408 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIRKMVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT ++GDPS R + R+MM ++ I  NIE  K   S FI++G G   ALM+N
Sbjct: 63  NRPIALLGGGTGMVGDPSGRTDMRQMMTTETINHNIECFKKQMSRFIEFGEG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF+EL
Sbjct: 121 NADWLTNLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFLEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSPY F+QYWRN+ DADV+   + LT LP+ EID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPYEFYQYWRNVADADVLKCIRMLTFLPLEEIDEMDKWEGSQLNKAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG +EA+KA  AA   F     S+++PT    + E+  G  +L+L+V+   + S +E
Sbjct: 299 KLVHGEDEAKKADEAAKALFAGGGKSENVPTTVYPQAELDAGKDILSLLVETKLSASRSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ARR ++   + +N+  ++         DFD+ G + +  GKK +    
Sbjct: 359 ARRLVQQGGVTVNDKKVTAIDRVFTTADFDADGVLLIKKGKKGYHQIK 406


>gi|156741773|ref|YP_001431902.1| tyrosyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189029767|sp|A7NK64|SYY_ROSCS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|156233101|gb|ABU57884.1| tyrosyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 424

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 165/426 (38%), Positives = 250/426 (58%), Gaps = 15/426 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L  RG +++ S+   LD L  +  VT YIG+D +A SLH GHL  L+ L   Q
Sbjct: 1   MTTILDELRWRGLLYESSD--GLDDLLERERVTLYIGFDPSADSLHIGHLLPLLTLARFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L GGGT +IGDPS + + R ++  +++  N+E IK   + F+ +  G   A+
Sbjct: 59  RWGHTPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKRQLAQFLDFNAGDHSAM 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  WL  +  +D LR++G   +VN ML+ +SVRSR+  E  +SF EF+YM+LQAYDF
Sbjct: 119 LLNNAEWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMMSETGISFTEFSYMLLQAYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L ++Y C+LQ GGSDQWGNI  GI+L  R    K + L  PL+T A GTK GKT SGA
Sbjct: 179 AYLFEHYGCKLQAGGSDQWGNITAGIELIRRTSGQKAYGLVYPLVTKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKII 302
           +WL+ + TSPY F+Q+W N+DDADV  + +  T L  +EI+ + ++     E   A++ +
Sbjct: 239 VWLDPKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSAAEIEELEQITARQPERRTAQQRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVS-RGMG 351
           A E+T MVHG     +A  A+   F  S             + +P+I++ + ++   GM 
Sbjct: 299 AREVTRMVHGEAALARAEEASQALFGGSLASLSADDVADIFEDVPSITLPRQDLEGDGMS 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+  +V+ G ATS ++ARR ++   I INN   ++   ++ L D      I L  G++++
Sbjct: 359 LIDALVRCGIATSKSDARRAIEGGGIYINNVQSADVGRRLTLHDSIDGQCIVLRKGRRHY 418

Query: 412 IICHLC 417
            +  L 
Sbjct: 419 HLIRLV 424


>gi|148656197|ref|YP_001276402.1| tyrosyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|189029768|sp|A5UUZ9|SYY_ROSS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148568307|gb|ABQ90452.1| tyrosyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 424

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 163/425 (38%), Positives = 247/425 (58%), Gaps = 15/425 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L  RG +++ S+   LD L ++  VT YIG+D +A SLH GHL  L+ L   Q
Sbjct: 1   MTTILDELRWRGLLYESSD--GLDELLTRERVTLYIGFDPSADSLHIGHLLPLLTLARFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L GGGT +IGDPS + + R ++  +++  N+E IKG  + F+ +  G   AL
Sbjct: 59  RWGHTPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKGQLAQFLDFNAGDHSAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  WL  +  +D LR++G   +VN ML+ +SVRSR+  E  +SF EF+YM+LQAYDF
Sbjct: 119 LLNNADWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMTSETGISFTEFSYMLLQAYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L ++Y C+LQ GGSDQWGNI  GI+L  R    K + L  PL+T A GTK GKT SGA
Sbjct: 179 AYLFEHYGCKLQAGGSDQWGNITAGIELIRRTLGQKAYGLVYPLVTKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKII 302
           +WL+ + TSPY F+Q+W N+DDADV  + +  T L   EI+ + ++     E   A++ +
Sbjct: 239 VWLDPKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSADEIEELERITASQPERRTAQQRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVS-RGMG 351
           A E+T MVHG     +A  A+   F  S             + +P+ ++ + +    G  
Sbjct: 299 AREVTRMVHGETALARAEEASQALFGGSLARLSAGDVIDIFEDVPSTTLPRQDFEGDGFP 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++++ G ATS ++ARR ++   I +NN    +   ++ L D      I L  G+K +
Sbjct: 359 LIDVLLRCGIATSKSDARRTIEGGGIYVNNIQCPDVGRRLTLNDSIDGQFIVLRKGRKQY 418

Query: 412 IICHL 416
            +  +
Sbjct: 419 HLVKV 423


>gi|34581532|ref|ZP_00143012.1| tyrosyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262917|gb|EAA26421.1| tyrosyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 411

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 187/409 (45%), Positives = 280/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFIHKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEMRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+R+Q LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLERQQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG  TS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLVTSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|254456480|ref|ZP_05069909.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083482|gb|EDZ60908.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 409

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 196/413 (47%), Positives = 281/413 (68%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            + FL    +RGF +Q +N  EL  L  +  +  YIG+D TA SLH G L Q+M L  LQ
Sbjct: 1   MNKFLKEFKDRGFFYQCTNETELSDLMDKEKIKGYIGFDCTAESLHVGSLLQIMCLRLLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI L+GGGT+ IGDPS +D++R+++   EI++NIE I+ I   F+      T  +
Sbjct: 61  KNGHRPIVLLGGGTTRIGDPSGKDKTRKILDEDEIEKNIENIQNILKKFLDNDNSDTKPI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN TWL  + YI  LR+IG  F++N+ML+F+SV++RL+REQSLS++EFNYMILQAYDF
Sbjct: 121 FVNNYTWLKDLNYISFLRDIGKHFTINKMLTFDSVKTRLEREQSLSYMEFNYMILQAYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL KN +C LQ+GGSDQWGNI+ G+DL ++    + F LT+PL+T ASG KMGKT +GA
Sbjct: 181 LELNKNENCALQIGGSDQWGNIVNGVDLIKKYSNKQGFGLTTPLITLASGAKMGKTENGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+++    Y++WQ+WRN DD DVV F K  T L ++EI+++     K+INE K ++A 
Sbjct: 241 IWLDEKYLPAYDYWQFWRNTDDRDVVKFLKFFTDLEIAEINKVK---EKDINELKTLLAN 297

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E TTM+HG++ A+++  AA E F  +    + P+I ISK++  + +G++ L++ +    S
Sbjct: 298 EATTMLHGQKAAKESEQAAREAFSGNSLGSNSPSIKISKEDFEKKLGIIDLVILSKLENS 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +E RR +K NAIKIN+ IIS+EKL I   DF     +KLS GKK H+   + 
Sbjct: 358 KSEIRRLIKGNAIKINDEIISDEKLIIN-HDFFKEDYLKLSIGKKRHLKILIS 409


>gi|91205726|ref|YP_538081.1| tyrosyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122425472|sp|Q1RI22|SYY_RICBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|91069270|gb|ABE04992.1| Tyrosyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 411

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 191/409 (46%), Positives = 279/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFINKGYFHQCTDLERLTSITKESKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDPS +DE+R+ +  ++I  N E IK   S FIK+G G++DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPSGKDEARKTITKEDIARNAEGIKKSLSKFIKFGDGESDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSLYYLDFLRDFGSHFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++ + ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLTRKISSKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  + L   E+     L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSELTNEELVVFENLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG++EA+ A   +++ F+     +++ TI +  + +  G+    L  +AG ATS +E
Sbjct: 303 KLCHGKQEAKNALETSVKIFEQGQIDENLTTIVLEPEMLQAGITAFELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    K+N+ +I +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKVNDQLIEDENMVINTTFLLDNKVIKLSAGKKRHILVKI 411


>gi|182677022|ref|YP_001831168.1| tyrosyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|254783567|sp|B2IAX9|SYY_BEII9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182632905|gb|ACB93679.1| tyrosyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 421

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 225/413 (54%), Positives = 298/413 (72%), Gaps = 3/413 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SDFL+IL+ERGF+HQ S+P  LD     G + AYIG+D TA SLH G L Q+M+L WLQK
Sbjct: 9   SDFLAILTERGFLHQCSDPAGLDEKAKSGGLIAYIGFDCTAPSLHVGSLVQIMMLRWLQK 68

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           TG KPI LMGGGT+ +GDPS +DESR+++  +EI+ N + IK +FS F+ +G GKTDALM
Sbjct: 69  TGGKPIVLMGGGTTRVGDPSGKDESRKILTLEEIEANKQGIKQVFSKFVHFGEGKTDALM 128

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            +N  WL ++ YID LR++G  FSVNRMLS +SV+ RL+R+Q LSFLEFNYM  QAYDFV
Sbjct: 129 ADNAEWLTALHYIDFLRDVGRHFSVNRMLSMDSVKLRLERDQELSFLEFNYMCCQAYDFV 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C+LQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTTASG KMGKT  GA+
Sbjct: 189 ELHKRYGCQLQMGGSDQWGNIVTGIDLGRRMGTAQLYALTSPLLTTASGAKMGKTAKGAV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++ M   +++WQ+WRN +D DV  F K  T LP+ EI R+  LQ  EINEAKKI+ATE
Sbjct: 249 WLDEAMLPVFDYWQFWRNCEDRDVGRFLKLFTELPLDEIARLEALQDAEINEAKKILATE 308

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATS 364
            T MVHGRE AE+AA  A + F+  + +  +P++ +  +E+   G+G+L    KAG   S
Sbjct: 309 ATAMVHGREAAERAADTARQTFEEGVVAASLPSVILQTNEIPAEGLGILAAFAKAGLVNS 368

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EARR +K   +++N+  I++EK  I ++  ++    KLS G+K H++  L 
Sbjct: 369 TSEARRQIKGGGLRLNDQPITDEKAVITIEAIEAG--AKLSLGRKKHVLLRLA 419


>gi|325569773|ref|ZP_08145797.1| tyrosine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157078|gb|EGC69244.1| tyrosine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 429

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 157/421 (37%), Positives = 233/421 (55%), Gaps = 11/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   
Sbjct: 10  MSTDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRF 69

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A
Sbjct: 70  QQNGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPA 129

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYD
Sbjct: 130 IIANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYD 187

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   
Sbjct: 188 FLNLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGN 247

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ + T+PY F+Q+W N DD D V F K  T L + EI           E   A+K 
Sbjct: 248 AVWLDAKKTTPYEFFQFWINTDDRDAVKFLKYFTFLSLEEIAVIEAEFNAAPESRAAQKA 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV--SRGMGLLT 354
           +A E+TT+VHG E  E+A   +   F  +I   +   I      +   +V     + ++ 
Sbjct: 308 LAKEVTTLVHGAEAYEQAVRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADDSLNIVE 367

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A    S  +AR  +++ AI IN   + +   +I+  D      + +  GKK + + 
Sbjct: 368 VLTTAKIEPSKRQAREDVQNGAIYINGERVQDLTYEIQASDRIGGKYVVIRRGKKKYFLL 427

Query: 415 H 415
            
Sbjct: 428 T 428


>gi|320160179|ref|YP_004173403.1| tyrosyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994032|dbj|BAJ62803.1| tyrosyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 426

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 150/426 (35%), Positives = 230/426 (53%), Gaps = 15/426 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +    L  RG I        +  L ++  VT Y G+D TA SLH GH   L+ L  L
Sbjct: 1   MSHNAFEELQWRGLIFDYM--EGVPELLAKEKVTVYNGFDPTADSLHVGHTLPLIALARL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI++ GGGT +IGDPS +   R+++  ++I+ N+  I+   +  + +      A
Sbjct: 59  QRFGHTPIAVAGGGTGMIGDPSGKSSERQLLSREQIEYNVSCIQKQLAHLLDFEVKSNPA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +  +D LR+IG  F+VN ML+ +SV+SR+ RE+ +SF EF+YM+LQ+YD
Sbjct: 119 RLVNNADWLLKLNLVDFLRDIGKHFTVNYMLAKDSVKSRIDREEGISFTEFSYMLLQSYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L   + C+LQ GGSDQWGNI  G +L  R++  + + +   L+T A GTK GKT SG
Sbjct: 179 FLHLYDTFGCKLQTGGSDQWGNITAGAELIRRVRGGQAYGMVYHLITKADGTKFGKTESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           ++WL+   TSPY F+Q+W N DD DVV + K  T     EI  +     +  E  E  + 
Sbjct: 239 SVWLDPNKTSPYRFYQFWLNTDDRDVVKYLKYFTFFTREEIAELEASLAERPEQREPHRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVS-RGM 350
           +A  +T M+HG     +A  A+   F                  +P+  + + ++   G 
Sbjct: 299 LARAMTQMIHGETALARAEQASQALFGGELETLTAAEIADIFSEVPSCEVPRHQLEGEGY 358

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+ L+V AG A S  EARR+++   I +NN  + +    + LQD      + L  G+KN
Sbjct: 359 PLVDLLVTAGVAKSKGEARRNIQEGGIYVNNRRVEDLNRAVHLQDALQGQFVVLRKGRKN 418

Query: 411 HIICHL 416
           + +  L
Sbjct: 419 YTLVRL 424


>gi|212712058|ref|ZP_03320186.1| hypothetical protein PROVALCAL_03135 [Providencia alcalifaciens DSM
           30120]
 gi|212685580|gb|EEB45108.1| hypothetical protein PROVALCAL_03135 [Providencia alcalifaciens DSM
           30120]
          Length = 428

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 153/426 (35%), Positives = 222/426 (52%), Gaps = 11/426 (2%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSNNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTTETVQEWVEKIRNQVSPFLSFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A + NN  W   +  +  LR+IG  FSVN+M++ ESV+ R  + +  +SF EF Y 
Sbjct: 121 GENSARLANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  + K     LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T   GTK 
Sbjct: 181 LLQGYDFANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKTDGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TS Y F+Q+W N  DADV  F K  T + +SEID          + 
Sbjct: 241 GKTEGGAVWLDPKKTSQYKFYQFWINTADADVYRFLKFFTFMELSEIDALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRG 349
             A+ ++A E+T +VHG      A       F            + +    I    +  G
Sbjct: 301 PRAQYVLAEEVTKLVHGEAGLAAAKRITESLFSGAVSDLTEADFEQLAQDGIPCIALEDG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V +  A S  +AR  + SNA+ IN    +         D        +  GKK
Sbjct: 361 ADLQQALVDSELAPSRGQARTAISSNAVSINGQKQTEPMYVFTDADRLFGRYTLIRRGKK 420

Query: 410 NHIICH 415
           N  + +
Sbjct: 421 NDCLIN 426


>gi|293396285|ref|ZP_06640563.1| tyrosine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421074|gb|EFE94325.1| tyrosine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 428

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 151/425 (35%), Positives = 225/425 (52%), Gaps = 11/425 (2%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M    +  + +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MENLMASINLIQQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++  S+ + E ++KI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKAAERKLNTSETVSEWVDKIRKQVSPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y 
Sbjct: 121 GSNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFAELNHRHQVVLQIGGSDQWGNITSGIDLTRRMHQQQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL  E TSPY F+Q+W N  DADV  F K  T + + +I+          + 
Sbjct: 241 GKTEGGAVWLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEAEDRSSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRG 349
             A+ ++A E+T MVHG +    A       F  ++H         +    +   ++ + 
Sbjct: 301 PRAQYVLAEEVTRMVHGEQGLAAAQRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDKD 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ +N    SN +      D        L  GKK
Sbjct: 361 ADLQQALVNAELVPSRGQARTMIGSNAVTVNGEKQSNAEYTFTNADRLFGRYTLLRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLI 425


>gi|56552539|ref|YP_163378.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762221|ref|ZP_04760303.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|81354696|sp|Q5NLZ3|SYY_ZYMMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56544113|gb|AAV90267.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373268|gb|EER62887.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 409

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 210/415 (50%), Positives = 282/415 (67%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL +L  RG+IHQI++ + LD   SQ V+ AYIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTQFRSDFLRLLETRGYIHQITDAKSLDEKASQSVIAAYIGFDPTAASLHVGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R+++    I+ NI  IK +F  F+ +G G+
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLLDEDTIKANIASIKRVFEHFLHFGDGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  ++YI  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAVMVDNAEWLDRLEYIPFLRDVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++ +   LQ+GGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 181 AYDFLELSRRFGVCLQLGGSDQWGNIVNGIELARRMDGKEVFGLTSPLMTTADGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M SPY++WQ+WRN  DADV  F K  T LP+ EI R+A L+G EINEAKK
Sbjct: 241 VGGAVWLNGDMCSPYDYWQFWRNTHDADVERFLKLFTDLPLDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T + HG + AE+AA  A + F+       +P + +S       + L+  +V  G
Sbjct: 301 ILANEATKLAHGEKAAEEAAATAKKTFEEGAAGDALPVMKVS----DSSISLVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR ++    +IN     +EK  I++       NI++S GKK H +  
Sbjct: 357 LVASKAEARRMIRGGGARINGEKALDEKAVIEVT----AENIRISAGKKAHGVIQ 407


>gi|37526487|ref|NP_929831.1| tyrosyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81419219|sp|Q7N3W6|SYY1_PHOLL RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|36785918|emb|CAE14970.1| tyrosine-tRNA synthetase (tyrosine--tRNA ligase) (TYRRS)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 424

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 151/423 (35%), Positives = 226/423 (53%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  ++ +  L ERG I Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MSS--NNLIKQLQERGLIAQVTDENALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+   R++     ++E +EKI+   S F+ +  G+
Sbjct: 59  KRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTEATVKEWVEKIRRQVSPFLDFDCGE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A   NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +L
Sbjct: 119 NSAKTANNYDWFGNMDVLAFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF  L + +   LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GK
Sbjct: 179 QSYDFARLNEVHGVELQIGGSDQWGNITSGIDLTRRITQKQVFGMTVPLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + +ID          +   
Sbjct: 239 TEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNLEDIDALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMG 351
           A+ ++A ++T MVHG E    A       F              +    +   E+ +G  
Sbjct: 299 AQYVLAEQVTGMVHGEEGLAAAKRITESLFSGAAADLTEADFAQLAQDGMPVIELEKGAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V AG   S  +AR  + SNA+ IN    S  +      +        L  GKK+ 
Sbjct: 359 LQQALVNAGLVPSRGQARTMISSNAVAINGEKQSEPEYLFTDSNRLFDRYTLLRRGKKHD 418

Query: 412 IIC 414
            + 
Sbjct: 419 CLI 421


>gi|227822086|ref|YP_002826057.1| tyrosyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227341086|gb|ACP25304.1| tyrosyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 417

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 248/415 (59%), Positives = 308/415 (74%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFI Q S+   LD L  +  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLHERGFIQQTSDDTGLDELFRKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+ ISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS+++ YG G 
Sbjct: 61  HWLQATGHRAISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLSYGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 RDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K YDCRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYDCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GAIWLN +M   Y+FWQYWRN +DADV  F K  TTLPM EI+R++KL G EINE KK
Sbjct: 241 VNGAIWLNPDMLGTYDFWQYWRNTEDADVTRFLKLYTTLPMPEIERLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT  +HGR  AE AA  A + F+    ++ +P+I +   E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITATLHGRAAAENAAETARKTFEEGALAEDLPSIEVPAPELETGLGLLTLVVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++   ++IN+  I++E+  +   D    G IKLS GKK HI+  
Sbjct: 361 LAASNGEARRHVQGGGVRINDEQINDERRVVGSADVTGDGVIKLSLGKKKHILVR 415


>gi|18309634|ref|NP_561568.1| tyrosyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168212096|ref|ZP_02637721.1| tyrosyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168217233|ref|ZP_02642858.1| tyrosyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|81767835|sp|Q8XMN6|SYY_CLOPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|18144311|dbj|BAB80358.1| tyrosine-tRNA ligase [Clostridium perfringens str. 13]
 gi|170709993|gb|EDT22175.1| tyrosyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|182380693|gb|EDT78172.1| tyrosyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 406

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 178/413 (43%), Positives = 259/413 (62%), Gaps = 7/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +      A+
Sbjct: 61  KAGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 LVNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRL--ERGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA
Sbjct: 177 YVLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S
Sbjct: 297 EVTKLVHGEEEATKAQQAAEALFGKGGDMSNVPTYEMGKDKL--GAELLDILVEAEIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             E +R +K   + +N   +++ K  ++  DF   G + +  GKKN+    L 
Sbjct: 355 KAEGKRLVKQGGLSLNGEKVADFKKTLEEADF-ENGEVLIKRGKKNYNKIVLA 406


>gi|254517941|ref|ZP_05129997.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911690|gb|EEH96891.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 406

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 169/412 (41%), Positives = 255/412 (61%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L +RG+I Q ++  E   L  +  +T YIG+D TA SLH GH   LM +  +Q
Sbjct: 1   MANVLDELLDRGYIKQFTHEDETRELLEKEKITFYIGFDPTADSLHVGHFIALMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT+++GDPS + + R M+  ++IQ N++ IK     FI +      A+
Sbjct: 61  KAGHRPIALLGGGTAMVGDPSGKTDMRTMLTKEQIQHNVDSIKKQMERFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 LVNNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C++Q+GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA
Sbjct: 177 YVLNQKYGCKMQLGGDDQWSNMIAGVELVRRKAQGQAMAMTCSLLTNSQGQKMGKTVGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSP++F+QYWRN+DDADV      LT +PM E+  +  ++G  INEAKK +A 
Sbjct: 237 LWLDPEKTSPFDFYQYWRNVDDADVEKCLSLLTFVPMDEVREICSVEGAAINEAKKRLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA KA +AA   F   +   ++PT++ISK+++  G  +L ++ +     S
Sbjct: 297 EVTKLVHGEEEATKAKSAAEALFSGGVDMSNVPTVTISKEKL--GSTILDIMAENKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   + +N   ++     ++  D +      L  GKKN+    +
Sbjct: 355 KAEGRRLIQQGGLSLNGEKVTEVTRTLEESDLEDGS-ALLKRGKKNYNKIVI 405


>gi|254464861|ref|ZP_05078272.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685769|gb|EDZ46251.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 418

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 219/420 (52%), Positives = 284/420 (67%), Gaps = 4/420 (0%)

Query: 1   MP-AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+
Sbjct: 1   MTYTPKSDFVAVMMERGFLADCTDYQGLDEALLQGVRPAYIGFDATAKSLHVGSLIQIMM 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L W QKTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  IK +FS++I Y T 
Sbjct: 61  LRWFQKTGHQPITLMGGGTTKVGDPSFRADERPLLTEAQIDENIAGIKKVFSAYIDYDTD 120

Query: 120 -KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
               ALMLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMI
Sbjct: 121 APNKALMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMI 180

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQAYDF+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMG
Sbjct: 181 LQAYDFMELNRRYGCILQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGKKMG 240

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           KT  GAIWLN +M SPY FWQ+WRN  DADV  F K  T LP++E +R+  L G EIN A
Sbjct: 241 KTADGAIWLNADMRSPYEFWQFWRNTTDADVGRFLKLYTELPVAECERLGALAGSEINAA 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K I+A E+TT+ HG + A  A   A E F+       +PT+S+S  ++  G+ ++ LIVK
Sbjct: 301 KVILANEVTTLCHGADAAAAAEATAREVFEKGGVGDDLPTLSLSPADLGDGISIVQLIVK 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +G A S  +A+R +  +  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 361 SGLAKSGKDAKRLIAEHGAKIDDQPLTDAGLIIDAGALTSP--IKLSAGKKRHALVRLDG 418


>gi|317492097|ref|ZP_07950528.1| tyrosyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919980|gb|EFV41308.1| tyrosyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 424

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 222/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPLALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     + E ++KI+   + F+ +  G+  A+ 
Sbjct: 64  EGHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVDKIRHQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ASLNELHGVELQIGGSDQWGNITSGIDLTRRLHQKQVWGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +ID          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDLKDIDALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A  +T MVHG E    A       F              +    +   E+ R   L   +
Sbjct: 304 AELVTRMVHGEEGLAAAKRITQSLFSGALSEMTEADFAQLAQDGMPMVELERDADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYTFSDADRLFGRFTLLRRGKKNYCLI 421


>gi|260753802|ref|YP_003226695.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258553165|gb|ACV76111.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 409

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 282/415 (67%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL +L  RG+IHQI++ + LD   SQ V+ AYIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTQFRSDFLRLLETRGYIHQITDAKSLDEKASQSVIAAYIGFDPTAASLHVGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R+++    I+ NI  IK +F  F+ +G G+
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLLDEDTIKANIASIKRVFEHFLHFGDGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  ++YI  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAVMVDNAEWLDRLEYIPFLRDVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++ +   LQ+GGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 181 AYDFLELSRRFGVCLQLGGSDQWGNIVNGIELARRMDGKEVFGLTSPLMTTADGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GAIWLN +M SPY++WQ+WRN  DADV  F K  T LP+ EI R+A L+G EINEAKK
Sbjct: 241 VGGAIWLNGDMCSPYDYWQFWRNTHDADVERFLKLFTDLPLDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T + HG + AE+AA  A + F+       +P + +S       + L+  +V  G
Sbjct: 301 ILANEATKLAHGEKAAEEAAATAKKTFEEGAAGDALPVMKVS----DSSISLVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR ++    +IN     +EK  I++       NI++S GKK H +  
Sbjct: 357 LVASKAEARRMIRGGGARINGEKALDEKAVIEVT----AENIRISAGKKAHGVIQ 407


>gi|300856964|ref|YP_003781948.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437079|gb|ADK16846.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 406

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 178/412 (43%), Positives = 260/412 (63%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   IL ERG+I Q ++  E+  L  +  VT YIG+D TA SLH GH  Q+M++ ++Q
Sbjct: 1   MPNVYDILLERGYIKQSTHEEEIRELLGKEKVTFYIGFDPTADSLHVGHFLQMMVMHYMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT+++GDP+ + + R+M+  ++IQ N E  K  FS  + +      A+
Sbjct: 61  EAGHRPIALLGGGTTMVGDPTGKTDMRKMLSKEQIQHNAECFKKQFSRLVDFKDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ YI+ LR+IG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 LANNADWLLNLNYIEFLRDIGVHFSVNKMLTAECFKQRL--ERGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C L++GG DQW NII G++L  + +    F +T  LLT + G KMGKT  GA
Sbjct: 177 LELNRRYGCVLELGGDDQWSNIIAGVELIRKKEQKPAFGMTFTLLTKSDGKKMGKTEGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+ E TSPY F+QYWRNI DADV      LT LPM E+ R+  L G+EINEAKK++A 
Sbjct: 237 IWLDPEKTSPYEFYQYWRNIGDADVEKCLALLTFLPMDEVKRLGSLPGEEINEAKKVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG +EAEKA  AA   F    + +++PT+ I ++ +  G  ++ L+       S
Sbjct: 297 EVTKIVHGLKEAEKAKEAAEALFSGGQNMENVPTVEIGENSL--GCSIVELLADLQILPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR ++ N + +N+  I++ KL I    F   G + +  GKK +    L
Sbjct: 355 KSEVRRLIQQNGLTVNDEKITDPKLLITKDSF-KDGEMLIRRGKKKYNRIIL 405


>gi|329298922|ref|ZP_08256258.1| tyrosyl-tRNA synthetase [Plautia stali symbiont]
          Length = 424

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 232/428 (54%), Gaps = 21/428 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIQQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   + F+ +  G 
Sbjct: 59  KRFQDAGHKPVALVGGATGLIGDPSFKAAERKLNTTETVNEWVEKIRKQVAPFLDFDCGD 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +Q +S+ EF+Y +L
Sbjct: 119 NSAIAANNYDWFGCMNVLTFLRDIGKHFSVNQMINREAVKMRLNREDQGISYTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF EL K YD  LQ+GGSDQWGNI  GIDL  RL   + + LT  L+T + GTK GK
Sbjct: 179 QGYDFAELNKRYDVVLQIGGSDQWGNITSGIDLTRRLHQQQAWGLTVLLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   
Sbjct: 239 TEGGAVWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEV 346
           A+ ++A ++T +VHG+     A       F  S+               MPTIS++ D+ 
Sbjct: 299 AQYVLAEQVTRLVHGQSGLSAAKRITDSLFSGSLSDMTEADFEQLAQDGMPTISLNADD- 357

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                L   +V A    S  +AR  + SNA+ +N    S+ + +    D        L  
Sbjct: 358 ----DLQQALVAAELVPSRGQARTMIGSNAVSVNGEKQSDAEYRFSDSDKLFGRYTLLRR 413

Query: 407 GKKNHIIC 414
           GKK++ + 
Sbjct: 414 GKKHYCLI 421


>gi|307266340|ref|ZP_07547879.1| tyrosyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918647|gb|EFN48882.1| tyrosyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 406

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 182/410 (44%), Positives = 259/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK 
Sbjct: 2   SVLDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  G   A+M 
Sbjct: 62  GHRPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSDG--KAIMA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 120 NNADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRL--ERGLSFLEFNYMLMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+W
Sbjct: 178 LNRRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+
Sbjct: 238 LDPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +
Sbjct: 298 TKLIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + INN  + +    IK +      +I +  GKK +    +
Sbjct: 356 EGRRLIQQGGLYINNEKVESIDEYIKDE-MIKDNSILIRKGKKEYHRLVI 404


>gi|296332055|ref|ZP_06874519.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675550|ref|YP_003867222.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150826|gb|EFG91711.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413794|gb|ADM38913.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 422

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 238/422 (56%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MTNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A+
Sbjct: 61  LAGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFDATENPAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF
Sbjct: 121 IANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ESGISYTEFSYMILQSYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L ++ +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  
Sbjct: 179 LNLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GAIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K
Sbjct: 239 GAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLL 353
            +A E+T +VHGRE  E+A   +   F  +I       + +   +V       S+ + L+
Sbjct: 299 RLAEEVTALVHGREALEQAINISQALFSGNIKELSAEDVKVGFKDVPSMEADSSQELSLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V++  + S  +AR  +++ A+ IN    +     +  +D        L  GKK + +
Sbjct: 359 DVLVQSKLSPSKRQAREDIQNGAVYINGERQTEINYILSGEDRIEGQFTVLRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 VT 420


>gi|300716511|ref|YP_003741314.1| Tyrosyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062347|emb|CAX59464.1| Tyrosyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 424

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 225/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+ + R++  S+ + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHRPVALVGGATGLIGDPSFKADERKLNTSETVGEWVEKIRHQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+   TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG E    A       F  S+        + +    I    + R   L   +
Sbjct: 304 AERVTRLVHGEEGLAAAERITKSLFSGSLSEMTEADFEQLAQDGIPFVALDRDQDLQQAM 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V    A S  +AR+ ++S A+ IN     + +      D        L  GKKN+ + 
Sbjct: 364 VDGDLAPSRGQARKLIESKAVSINGEPQLSAEYTFAETDRLFDRFTLLRRGKKNYCLI 421


>gi|254474897|ref|ZP_05088283.1| tyrosyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214029140|gb|EEB69975.1| tyrosyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 418

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 214/415 (51%), Positives = 284/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+S++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFISVMMERGYLADCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I  NI  IK +F+++I Y TG +  A
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDDQIDSNIAGIKKVFAAYIDYDTGAENSA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNSDMLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HGR  AE A   A E F+       +PT+S+S  ++  G+ ++ LIVK+G A 
Sbjct: 306 NEVTALLHGRAAAEAAEATAREVFEKGGVGDDLPTLSLSSADLGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDKPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLDG 418


>gi|308174658|ref|YP_003921363.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607522|emb|CBI43893.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554588|gb|AEB25080.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912992|gb|AEB64588.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 421

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 237/422 (56%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MTNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPS +   R +     + E  +KIK   S F+ +  G+  A+
Sbjct: 61  LAGHHPIALVGGATGLIGDPSGKKAERTLNTQDIVVEWSQKIKNQLSRFLDFEAGENPAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W+  +  I+ LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF
Sbjct: 121 IANNFDWIGKMSIIEFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L +  +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  
Sbjct: 179 LNLYREKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GAIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K
Sbjct: 239 GAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLL 353
            +A E+T +VHGRE  E+A   +   F  +I       + +   +V       S  + L+
Sbjct: 299 RLAEEVTVLVHGREALEQAVHISQALFSGNIKELSAQDVKVGFKDVPSFEKDRSEELSLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V++  + S  +AR  +++ A+ IN    ++    +  +D        L  GKK + +
Sbjct: 359 DVLVESKLSPSKRQAREDIQNGAVYINGERQTDISHLLTAEDRIEDQFTVLRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 IT 420


>gi|167040949|ref|YP_001663934.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256751928|ref|ZP_05492799.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913840|ref|ZP_07131157.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725474|ref|YP_003905225.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166855189|gb|ABY93598.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256749233|gb|EEU62266.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890525|gb|EFK85670.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582535|gb|ADN55934.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 406

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 181/410 (44%), Positives = 259/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK 
Sbjct: 2   SVLDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT+++GDPS R + R+++  +EI  N E  K      I +  G   A+M 
Sbjct: 62  GHRPIVLIGGGTAMVGDPSGRTDMRKILTREEINRNAEAFKKQMQRLIDFSDG--KAIMA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 120 NNADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRL--ERGLSFLEFNYMLMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+W
Sbjct: 178 LNKRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKK++A E+
Sbjct: 238 LDPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKVLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +
Sbjct: 298 TKLIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + INN  + +    IK  +     +I +  GKK +    +
Sbjct: 356 EGRRLIQQGGLYINNEKVESVDEYIK-DNMIKDDSILIRKGKKEYHRLVI 404


>gi|168204711|ref|ZP_02630716.1| tyrosyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168213835|ref|ZP_02639460.1| tyrosyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|182627169|ref|ZP_02954880.1| tyrosyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|170663716|gb|EDT16399.1| tyrosyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170714657|gb|EDT26839.1| tyrosyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177907440|gb|EDT70118.1| tyrosyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 406

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/413 (43%), Positives = 259/413 (62%), Gaps = 7/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +      A+
Sbjct: 61  KAGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 LVNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRL--ERGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA
Sbjct: 177 YVLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S
Sbjct: 297 EVTKLVHGEEEATKAQQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             E +R +K   + +N   +++ K  ++  DF   G + +  GKKN+    L 
Sbjct: 355 KAEGKRLVKQGGLSLNGEKVADFKKTLEEADF-ENGEVLIKRGKKNYNKIVLA 406


>gi|289579444|ref|YP_003478071.1| tyrosyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289529157|gb|ADD03509.1| tyrosyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 406

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 183/410 (44%), Positives = 259/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L IL ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +QK 
Sbjct: 2   SVLDILQERGYIQQMTHENEIKELLEKEKVTFYIGFDPTADSLHVGHFLQIMVMSHMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  G   A++ 
Sbjct: 62  GHRPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSDG--KAIIA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 120 NNADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRL--ERGLSFLEFNYMLMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+W
Sbjct: 178 LNRRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+
Sbjct: 238 LDPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+K+  AA   F+      ++P++++  D +  G  +L ++ +A    S +
Sbjct: 298 TKLVHGEEEAQKSQKAAEALFEGGGDLNNVPSVTVPSDVL--GKKVLDVLFEAKIIPSKS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + INN  + +    IK  D     +I +  GKK +    +
Sbjct: 356 EGRRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEYHRLVI 404


>gi|294084595|ref|YP_003551353.1| Tyrosyl-tRNA synthetase, class Ib [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664168|gb|ADE39269.1| Tyrosyl-tRNA synthetase, class Ib [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 414

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 200/418 (47%), Positives = 274/418 (65%), Gaps = 4/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KSD +   ++RG+IHQ +N   LD   S  V+ AYIG+D TA SLH G L Q+M+L
Sbjct: 1   MT-YKSDLIQHYTDRGYIHQATNIEALDDAASTKVLPAYIGFDCTADSLHVGSLVQIMML 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQKTGHKPI LMGGGT+ +GDPS +D +R ++  Q+I+ N   IK +F  ++K+G G 
Sbjct: 60  RILQKTGHKPIVLMGGGTTKVGDPSGKDTARPLLSDQDIEANKNGIKKVFEKYLKFGDGP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL ++ YI  LR+ G  FS+NRM+  +SV+ RL REQ LSFLEFNY ILQ
Sbjct: 120 TDAIMVDNADWLDTLGYIRFLRDFGPHFSINRMMGMDSVKLRLDREQPLSFLEFNYAILQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPL+TTASG KMGK+
Sbjct: 180 AYDFLELRRRYGCLLQMGGSDQWGNIVTGIDLTRRVDAQEIFGLTSPLITTASGAKMGKS 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  S ++FWQ+WRN +DADV  F    T LPM E++R+  L+G +INEAK 
Sbjct: 240 ADGAVWLNDDKLSAFDFWQFWRNTEDADVARFLALFTELPMDEVNRLGALEGADINEAKI 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T++ HG E A  A   A + F  S  S  +P   ++       + ++  +   G
Sbjct: 300 ILANEATSLCHGTEAAAHAMQTAQQTFAGSGVSDGLPQFDLAAGRAEA-LDMVEALKIVG 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           FA S  EARR ++    ++N+  I++E +Q+ L DF      K+S GKK H +  + G
Sbjct: 359 FAASNGEARRLIRGGGARVNDVAINDENMQLTLSDFIDGK-AKISAGKKRHAML-VAG 414


>gi|315185721|gb|EFU19488.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 410

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 180/413 (43%), Positives = 246/413 (59%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD L++L+ERG + Q ++   L     +G VT Y+G D T  SLHAGHL  L     L 
Sbjct: 1   MSDALAVLAERGLVKQCTDLEGLGARMQEGPVTFYLGIDPTGPSLHAGHLVPLFAATHLV 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I L+GGGT+ IGDPS + E RR++  +EI  N   I+     F  +      AL
Sbjct: 61  NAGHRAIILIGGGTARIGDPSGKTEMRRILSVEEIDRNARAIQAQIERF--FPVDGNKAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + YID LREIG  FSVNRMLSFE+ ++RL  E  LSF+EFNY +LQAYDF
Sbjct: 119 MLNNAEWLADLNYIDFLREIGRHFSVNRMLSFETYKARL--ETGLSFIEFNYQLLQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + Y C LQ+GG DQWGNI+ GIDL  R++  + + LT PL+T + G KMGKT  GA
Sbjct: 177 LVLNERYGCTLQIGGDDQWGNIVAGIDLIRRVRGEEAYGLTMPLVTRSDGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  M SPY F+QYWRN+ D DV +F K  T LP+ EI  +     + IN AK+ +A 
Sbjct: 237 LFLDPSMVSPYEFFQYWRNVPDQDVATFLKYYTFLPIEEIATLTAHTDERINLAKERLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH-SQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           E+T ++HGREEA+KA  A+   F         +P + I ++E+  G+G++ L VK     
Sbjct: 297 ELTALIHGREEADKALEASRAAFGKGGQDRSSIPFVEIPREELEHGIGVVELFVKTDLCA 356

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR +      I    + + +  ++LQD    G I L  GKK +    +
Sbjct: 357 SKSEARRLISQGGAYIEGEQVKDLEQVVRLQDVPEAGEILLRAGKKRYFRVVV 409


>gi|321312505|ref|YP_004204792.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291485399|dbj|BAI86474.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320018779|gb|ADV93765.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 422

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 238/422 (56%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MTNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A+
Sbjct: 61  LAGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFEAAENPAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF
Sbjct: 121 IANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ESGISYTEFSYMILQSYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L ++ +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  
Sbjct: 179 LNLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GAIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K
Sbjct: 239 GAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-------RGMGLL 353
            +A E+T++VHGRE  E+A   +   F  +I       + +   +V        + + L+
Sbjct: 299 RLAEEVTSLVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSMEVDSTQELSLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V++  + S  +AR  +++ A+ IN    +     +  +D        L  GKK + +
Sbjct: 359 DVLVQSKLSPSKRQAREDIQNGAVYINGERQTEINYTLSAEDRIENQFTVLRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 VT 420


>gi|157693371|ref|YP_001487833.1| tyrosyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|189083642|sp|A8FGA6|SYY_BACP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157682129|gb|ABV63273.1| tyrosine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 422

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 158/422 (37%), Positives = 237/422 (56%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S  +  LS RG I Q ++   L  L ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MSQLMEELSFRGLIQQQTDEEGLTKLLAEEKIKLYSGFDPTADSLHIGHLLPILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ ++   +KIKG  S F+ +  G+  A+
Sbjct: 61  EAGHHPIALVGGATGLIGDPSFKKAERSLNPAEIVEHWSDKIKGQLSQFLDFEAGENPAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W+  +  I  LR+IG  F VN ML+ + V SR+  E  +S+ EF+Y+ILQ+ DF
Sbjct: 121 IVNNYDWISQMNVITFLRDIGKNFGVNFMLAKDIVSSRI--ETGISYTEFSYVILQSLDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L +N +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  
Sbjct: 179 LNLYRNENCKLQIGGSDQWGNITSGLELIRKSEAEGAKAFGLTMPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GAIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI    +      E  EA++
Sbjct: 239 GAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIASYEEKVQTAPEKREAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-------RGMGLL 353
            +A E+TT+VHGRE  E+A   +   F   I S     + +   +V          + L+
Sbjct: 299 RLAEEVTTLVHGRESLEQAVNISNALFKGEIKSLSAEEVKVGFKDVPSMEKSSTEELTLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V++  + S  +AR  + + A+ IN    +++   +  +D        L  GKK + +
Sbjct: 359 DLLVESKLSPSKRQAREDITNGAVSINGERQTDKDYVLSAEDRIENQFTVLRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 VT 420


>gi|154687107|ref|YP_001422268.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|189083641|sp|A7Z7R1|SYY_BACA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|154352958|gb|ABS75037.1| TyrS [Bacillus amyloliquefaciens FZB42]
          Length = 421

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 237/422 (56%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MTNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPS +   R +     + E  +KIK   S F+ +  G+  A+
Sbjct: 61  LAGHHPIALVGGATGLIGDPSGKKAERTLNTQDIVVEWSQKIKNQLSRFLDFEAGENPAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W+  +  I+ LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF
Sbjct: 121 IANNFDWIGKLSIIEFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L +  +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  
Sbjct: 179 LNLYREKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GAIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K
Sbjct: 239 GAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLL 353
            +A E+T +VHGRE  E+A   +   F  +I       + +   +V       S  + L+
Sbjct: 299 RLAEEVTVLVHGREALEQAVHISQALFSGNIKELSAQDVKVGFKDVPSFEKDRSEELSLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V++  + S  +AR  +++ A+ IN    ++    +  +D        L  GKK + +
Sbjct: 359 DVLVESKLSPSKRQAREDIQNGAVYINGERQTDIGHLLTAEDRIEDQFTVLRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 IT 420


>gi|292488183|ref|YP_003531065.1| tyrosyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899392|ref|YP_003538761.1| tyrosyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199240|emb|CBJ46356.1| tyrosyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553612|emb|CBA20657.1| Tyrosyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 425

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 152/418 (36%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVSDWVEKIRQQVAPFLDFNCGDNSAMA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M +I+          +   A+ ++
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEDINALEQEDKNSGKAPRAQIVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG E    A       F  S+          +    +   E+  G  L   +
Sbjct: 304 AELVTRLVHGEEGLTAARRITQSLFAGSVTELTAQDLAQLAQDGMPGVELEAGQDLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A  A S  +AR+ +++ +I IN S+ ++ +      D        L  GKKN+ + 
Sbjct: 364 VNAELAPSRGQARKLIEAKSISINGSLQTDAEYAFAENDRLFGQFTLLRRGKKNYSLI 421


>gi|110802117|ref|YP_697946.1| tyrosyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|169344446|ref|ZP_02865415.1| tyrosyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|123341956|sp|Q0SVA4|SYY_CLOPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110682618|gb|ABG85988.1| tyrosine--tRNA ligase [Clostridium perfringens SM101]
 gi|169297366|gb|EDS79475.1| tyrosyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 406

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/413 (43%), Positives = 259/413 (62%), Gaps = 7/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +      A+
Sbjct: 61  KAGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 LVNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRL--ERGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA
Sbjct: 177 YVLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQKSAYAMTCTLLTNSEGQKMGKTVNGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S
Sbjct: 297 EVTKLVHGEEEATKAKQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             E +R +K   + +N   +++ K  ++  DF   G + +  GKKN+    L 
Sbjct: 355 KAEGKRLVKQGGLSLNGEKVADFKKTLEEADF-ENGEVLIKRGKKNYNKIVLA 406


>gi|312172321|emb|CBX80578.1| Tyrosyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 425

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 152/418 (36%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVSDWVEKIRQQVAPFLDFNCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M +I+          +   A+ ++
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEDINALEQEDKNSGKAPRAQIVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG E    A       F  S+          +    +   E+  G  L   +
Sbjct: 304 AELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAQDLAQLAQDGMPGVELEAGQDLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A  A S  +AR+ +++ +I IN S+ ++ +      D        L  GKKN+ + 
Sbjct: 364 VNAELAPSRGQARKLIEAKSISINGSLQTDAEYAFAENDRLFGQFTLLRRGKKNYSLI 421


>gi|56479945|ref|NP_707537.2| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110805610|ref|YP_689130.1| tyrosyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|81723368|sp|Q83KY0|SYY_SHIFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122366541|sp|Q0T4E0|SYY_SHIF8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56383496|gb|AAN43244.2| tyrosine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110615158|gb|ABF03825.1| tyrosine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 424

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 145/418 (34%), Positives = 226/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + ++ +S  EF+Y + Q YD+
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDEGMSITEFSYNLQQGYDW 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L  +Y   LQ+GGSDQ  NI   IDL  RL    +  L  PL+T   GTK GKT  GA
Sbjct: 184 TCLNTHYYVELQIGGSDQRWNITSEIDLTRRLHQNHVLGLPDPLITNGDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG E  + A       F  S+        + +    +   E+ +G  L+  +
Sbjct: 304 AEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 364 VDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|167036539|ref|YP_001664117.1| tyrosyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320114971|ref|YP_004185130.1| tyrosyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855373|gb|ABY93781.1| tyrosyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928062|gb|ADV78747.1| tyrosyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 406

 Score =  381 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 184/408 (45%), Positives = 259/408 (63%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK GH
Sbjct: 4   LDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  G   A+M NN
Sbjct: 64  RPIVLIGGGTAMVGDPSGRTDMRKMLTKEEINRNAEAFKKQMQRLIDFSDG--KAIMANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRML+ E  +SRL  E+ LSFLEFNYM++QAYDF+EL 
Sbjct: 122 ADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRL--ERGLSFLEFNYMLMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL+
Sbjct: 180 KRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
              TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T 
Sbjct: 240 PNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E 
Sbjct: 300 LIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR ++   + INN  + +    IK  D     +I +  GKK +    +
Sbjct: 358 RRLVQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEYHRLVI 404


>gi|110800207|ref|YP_695086.1| tyrosyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|123148935|sp|Q0TTF4|SYY_CLOP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110674854|gb|ABG83841.1| tyrosyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 406

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/413 (43%), Positives = 259/413 (62%), Gaps = 7/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +      A+
Sbjct: 61  KAGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 LVNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRL--ERGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA
Sbjct: 177 YVLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S
Sbjct: 297 EVTKLVHGEEEATKAKQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             E +R +K   + +N   +++ K  ++  DF   G + +  GKKN+    L 
Sbjct: 355 KAEGKRLVKQGGLSLNGEKVADFKKTLEEADF-ENGEVLIKRGKKNYNKIVLA 406


>gi|323705684|ref|ZP_08117257.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534902|gb|EGB24680.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 405

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 182/410 (44%), Positives = 261/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
               +L ER FI Q+++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q+ 
Sbjct: 2   SVFDVLKERNFIQQMTHEDEIKELLEKEKVTFYIGFDPTADSLHVGHFLQLMVMAHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDP+ + + R+M+  +EI  N E  K   S FI +  G   A++ 
Sbjct: 62  GHRPIALIGGGTAMIGDPTGKTDMRKMLTKEEISHNAEAFKRQMSRFIDFSDG--KAILA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ Y++ LR+IG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+ 
Sbjct: 120 NNADWLLNLNYVEFLRDIGVHFSVNKMLTAECFKMRL--ERGLSFLEFNYMLMQAYDFLM 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y C LQMGG DQW NI+ G+DL  R +  + + +T  LLTT+ G KMGKT  GAIW
Sbjct: 178 LNKEYGCVLQMGGDDQWSNILAGVDLIRRKEGKQAYGMTFTLLTTSEGKKMGKTEKGAIW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + T PY+F+QYWRNIDD+DV      LT LP+ E+ R+  L+ KEINEAKK++A E+
Sbjct: 238 LDADKTPPYDFYQYWRNIDDSDVEKCLSLLTFLPIDEVRRLGSLKDKEINEAKKVLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG +EAEKA  AA   F+      ++PT +I+ D +  G+ LL ++VK G   S +
Sbjct: 298 TKLVHGVDEAEKAKKAAEALFEGRGDLSNVPTSTITSDML--GLNLLDVLVKTGIIPSKS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR +    + +N+  + +    +  +D    G + L  GKK++    L
Sbjct: 356 EGRRLITQGGLYVNDENVKDVNAVVT-EDMFKEGYMILRRGKKSYNKIIL 404


>gi|297545587|ref|YP_003677889.1| tyrosyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843362|gb|ADH61878.1| tyrosyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 406

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 182/410 (44%), Positives = 259/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L +L ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +QK 
Sbjct: 2   SVLDVLQERGYIQQMTHENEIKELLEKEKVTFYIGFDPTADSLHVGHFLQIMVMSHMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  G   A++ 
Sbjct: 62  GHRPIVLIGGGTAMVGDPSGRTDMRKMLTKEEINRNAEAFKKQMQRLIDFSDG--KAIIA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 120 NNADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRL--ERGLSFLEFNYMLMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+W
Sbjct: 178 LNRRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+
Sbjct: 238 LDPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+K+  AA   F+      ++P++++  D +  G  +L ++ +A    S +
Sbjct: 298 TKLVHGEEEAQKSQKAAEALFEGGGDLNNVPSVTVPSDVL--GKKVLDVLFEAKIIPSKS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + INN  + +    IK  D     +I +  GKK +    +
Sbjct: 356 EGRRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEYHRLVI 404


>gi|225018356|ref|ZP_03707548.1| hypothetical protein CLOSTMETH_02300 [Clostridium methylpentosum
           DSM 5476]
 gi|224948873|gb|EEG30082.1| hypothetical protein CLOSTMETH_02300 [Clostridium methylpentosum
           DSM 5476]
          Length = 407

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 167/407 (41%), Positives = 257/407 (63%), Gaps = 6/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  ++        VT YIG+D TA SLH GH  QL+++  LQ  G
Sbjct: 3   VFEELKRRGLIAQMTHEDKIKEALENEQVTFYIGFDATADSLHVGHFLQLVVMRHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+G GT+++GDP+ R + R+M+  +EI  N E  K   S FI +      AL++ 
Sbjct: 63  HKPVALLGTGTTMVGDPTGRTDMRQMLTPEEINHNAECFKKQMSKFIDFSDD--KALIVK 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YID LR++G +FSVN+ML+ ESV++RL  E+ LSFLEFNYM++Q+YDF+ L
Sbjct: 121 NGDWLLNLNYIDFLRDVGRYFSVNQMLTAESVKNRL--ERGLSFLEFNYMLMQSYDFLHL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +   C +++GG DQW NI+ GIDL  R++  +++ +T  LLTT  G KMGKT  GA+WL
Sbjct: 179 YQTMGCTMELGGDDQWSNILKGIDLVRRVEGEEVYGMTFTLLTTKEGKKMGKTAKGALWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           ++   SPY+F+QYWRN+ D DV++  K +T LP+ EI+ M   +G ++N+AK+I+A E+T
Sbjct: 239 DENKCSPYDFFQYWRNVSDDDVINCLKLITFLPIEEIEAMESWEGSQLNKAKEILAFEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG E+A +A  AA   F  +    +MPT  ++  + + G +GLL L+VK     S  
Sbjct: 299 KMVHGEEKATEALGAARALFTANSDDANMPTTQLADSDFNDGQIGLLDLMVKTKLCPSKG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           EARR ++   + +++  +++    +  QDF+   ++ +  GKK    
Sbjct: 359 EARRLVQQGGVSVDDVKVTDPAKVLTAQDFEKG-HVIIKKGKKVFHK 404


>gi|270261633|ref|ZP_06189906.1| tyrosyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270045117|gb|EFA18208.1| tyrosyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 424

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 152/418 (36%), Positives = 223/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTAETVNEWVEKIRKQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYNRHQVELQIGGSDQWGNITSGIDLTRRMHQKQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL  E TSPY F+Q+W N  DADV  F K  T + + +I+          +   A+ ++
Sbjct: 244 VWLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG E    A       F  ++H         +    +   ++     L   +
Sbjct: 304 AEEVTGMVHGAEGLAAAKRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDGDADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    SN +      D        L  GKK++ + 
Sbjct: 364 VNAELVPSRGQARTMIGSNAVTINGEKQSNAEYAFSDSDRLFGRYTLLRRGKKHYCLI 421


>gi|259418862|ref|ZP_05742779.1| tyrosyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345084|gb|EEW56938.1| tyrosyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 415

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 219/414 (52%), Positives = 287/414 (69%), Gaps = 4/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++I+ ERGF+   ++ + LD     G  TAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIAIMMERGFLADCTDYQGLDEALVSGTQTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F+ ++    G+T A+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFAKYL--DYGETGAM 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 124 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 184 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIFGLTSPLLTTSDGRKMGKSQGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN EM SPY FWQ+WRN  DADV  F K  T LP++E DR+  LQG EINE K I+A 
Sbjct: 244 IWLNDEMLSPYEFWQFWRNTTDADVGRFLKLYTELPVAECDRLGALQGSEINEGKIILAN 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T+++HG E A+ A   A E F+       +PT+S+S  E+  GM ++ +IVK+G A S
Sbjct: 304 EVTSLLHGAEAAKAAEATAREVFEKGGVGDDLPTLSLSAAELGEGMSIVQIIVKSGLAKS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  ++N++ +++  L I      S   IKLS GKK H +  L G
Sbjct: 364 GKEAKRLISENGARLNDAPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLDG 415


>gi|16080019|ref|NP_390845.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310911|ref|ZP_03592758.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315237|ref|ZP_03597042.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320155|ref|ZP_03601449.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324436|ref|ZP_03605730.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|135192|sp|P22326|SYY1_BACSU RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|143795|gb|AAA22878.1| transfer RNA-Tyr synthetase [Bacillus subtilis]
 gi|2293225|gb|AAC00303.1| tyrosine tRNA synthetase [Bacillus subtilis]
 gi|2635451|emb|CAB14945.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 422

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 238/422 (56%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MTNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A+
Sbjct: 61  LAGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFEAAENPAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF
Sbjct: 121 IANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ESGISYTEFSYMILQSYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L ++ +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  
Sbjct: 179 LNLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GAIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K
Sbjct: 239 GAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-------RGMGLL 353
            +A E+T++VHGRE  E+A   +   F  +I       + +   +V        + + L+
Sbjct: 299 RLAEEVTSLVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSMEVDSTQELSLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V++  + S  +AR  +++ A+ IN    +     +  +D        L  GKK + +
Sbjct: 359 DVLVQSKLSPSKRQAREDIQNGAVYINGERQTEINYTLSGEDRIENQFTVLRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 VT 420


>gi|302873572|ref|YP_003842205.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688247|ref|ZP_07630693.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576429|gb|ADL50441.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 406

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 176/412 (42%), Positives = 260/412 (63%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L ERGFI Q ++  E   L  +  +T YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDTLLERGFIKQFTHEEETRELLEKEKITFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT+++GDPS + + R+M+  ++I+EN++ +K     FI +      A+
Sbjct: 61  KAGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIEENVKSLKSQMEKFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL ++ Y+D LR+IG  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 IVNNADWLLNLNYVDFLRDIGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KNY C +++GG DQW N+I G++L  R +    +A+T  LLT + G KMGKT  GA
Sbjct: 177 YVLNKNYGCIMELGGDDQWSNMIAGVELIRRKEQKPAYAMTCTLLTNSEGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   T+P++F+QYWRN+DDADV      LT LP+ E+  +  L+ KEINEAKK++A 
Sbjct: 237 LWLDPNKTTPFDFYQYWRNVDDADVEKCLALLTFLPIDEVRALGALKDKEINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG+EEAEKA TAA   F   +   ++PT++I++D +  GM L+ ++       S
Sbjct: 297 EITKLVHGQEEAEKAKTAAEALFGGGVDLSNVPTVTITRDNL--GMALVDILTITKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR +    + IN+  I++  + I  + F     + +  GKKN     +
Sbjct: 355 KGEGRRLITQGGVAINDEKITDFAIAIGEEFFVDG-YMMVKKGKKNFFKVEI 405


>gi|71083438|ref|YP_266157.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|97201784|sp|Q4FMN5|SYY_PELUB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71062551|gb|AAZ21554.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 409

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 189/413 (45%), Positives = 268/413 (64%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            + FL    +RGF +Q +    L  L  +  + AYIG+D TA SLH G L Q+M L  LQ
Sbjct: 1   MNKFLKEFKDRGFFYQCTGEENLSQLLDKEKIRAYIGFDCTAESLHVGSLLQIMCLRLLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI L+GGGT+ IGDPS +D++R ++   EI++NI  I+ I  +F+     +T  +
Sbjct: 61  KHGHQPIVLLGGGTTRIGDPSGKDKTRTILSEDEIEKNINNIEKILKNFLDDKDPETKPI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN TWL ++ YI  LR++G  F++N+MLSF+SV+ RL+REQSLS++EFNYMILQAYDF
Sbjct: 121 FVNNYTWLKNLNYISFLRDVGKHFTINKMLSFDSVKIRLEREQSLSYMEFNYMILQAYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K   C LQ+GGSDQWGNI+ G+DL +R     ++ LT+PL+T ASG KMGKT SGA
Sbjct: 181 LELNKKEKCMLQIGGSDQWGNIVNGVDLIKRYSNNHVYGLTTPLITLASGAKMGKTESGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+K+  S Y++WQ+WRNIDD DV+ F K  T + + EI+ +       INE K ++A 
Sbjct: 241 VWLDKKFLSSYDYWQFWRNIDDRDVLKFLKIFTDINVDEIENIK---DDNINELKILLAN 297

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           + T+M+HG +EA K    A + F  +    ++PT  I+K  +   + +L L++ +   +S
Sbjct: 298 KATSMLHGEDEARKCQETAKQTFSENSLGDNLPTTQINKKMLDDNISILDLVILSKLESS 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +E RR +K N IKIN   IS+EK  I  +D   +  IKLS GKK HI   L 
Sbjct: 358 KSEIRRLIKGNGIKINGQAISDEKFLIT-EDLFKSSLIKLSLGKKKHIKVELI 409


>gi|299472939|emb|CBN77340.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 524

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 195/415 (46%), Positives = 270/415 (65%), Gaps = 3/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + +S FL  L ERGF HQ +N   LD    +  VV AY+G+D TA SLH G L Q+M+L 
Sbjct: 107 SVESPFLQTLVERGFYHQCTNVEGLDEKLRAGEVVKAYLGFDATADSLHVGSLLQIMILR 166

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK GH+PI L+GGGT+ IGDPS +DE+R+++    IQ NI+ +  +FS F+ +G G T
Sbjct: 167 HLQKAGHQPIVLVGGGTTKIGDPSGKDEARQLLDDAAIQRNIDGLASVFSKFLTFGDGPT 226

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA ++NN  WL  + Y+D LRE G  F++NRM++++SVR RL+REQ L+FLEFNYM+LQA
Sbjct: 227 DAKLVNNNEWLNQLSYLDFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQA 286

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL + Y C LQMGGSDQWGN++ G+DLG R++  +LFALT+PL+TT+ G KMGK+ 
Sbjct: 287 YDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSA 346

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GAIWLN E    Y++WQ+WRN DDADV+ F K  T L M EI ++ +L G  INEAK +
Sbjct: 347 AGAIWLNAEKLPEYDYWQFWRNTDDADVIRFLKLFTELSMDEILKLEQLTGAGINEAKIV 406

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIVKA 359
           +A E T ++HG    ++      + F   +   +  +P   I   E   GM ++ L ++ 
Sbjct: 407 LADETTKLLHGEACLKEIHQTVKQVFAGGVGGSNAALPRAKIESAEAEAGMAVVDLFIRL 466

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A + +E RR +K    K+N+  I +E   + L  FD    +KLS GKK H I 
Sbjct: 467 ELAKTKSEVRRLIKGGGAKLNDQKIVDEGFVVDLSTFDGKDELKLSSGKKRHGII 521


>gi|163741390|ref|ZP_02148781.1| tyrosyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385124|gb|EDQ09502.1| tyrosyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 418

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 283/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFIAVMMERGYLSDCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F ++I Y +G    A
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDAQIDDNIAGIKKVFDAYIDYDSGAGNAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN ++ SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNGDLLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A  A   A E F+       +PT+++S  +V  G+ ++ LIVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAAAEATAREVFEKGGIGDDLPTLALSAADVGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDKPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLEG 418


>gi|291526421|emb|CBK92008.1| tyrosyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 408

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 171/408 (41%), Positives = 256/408 (62%), Gaps = 6/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G G   A+M+N
Sbjct: 63  NKPIVLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEG--KAIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  
Sbjct: 299 KLVHGEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + RR+++   + + +  +++   +  L DF   G + +  GKK     
Sbjct: 359 DGRRNIQQGGVSVADEKVTDISTKYTLDDFKGEG-LIIRRGKKKFAKV 405


>gi|296114834|ref|ZP_06833482.1| tyrosyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978540|gb|EFG85270.1| tyrosyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 420

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 200/421 (47%), Positives = 275/421 (65%), Gaps = 9/421 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD       V+ YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLREAEARGFIFQCTDMEALDAAMQARPVSGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-- 118
             LQK GH+P++L+GGGT+ IGDPSFR+E+R++M ++ I +N+  I+G    F+ +    
Sbjct: 59  RLLQKHGHRPVALVGGGTAKIGDPSFREEARQLMTAETIAQNLRGIEGCLRQFLSFDDKS 118

Query: 119 ---GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               K+ A++ NN  WL  + YIDLLR++G  FS+NRMLSF+SVRSRL+REQ L+FLEFN
Sbjct: 119 SAKDKSGAILANNADWLDRLSYIDLLRDVGVHFSINRMLSFDSVRSRLEREQGLTFLEFN 178

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y ILQ+YDF EL   +   LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+SGT
Sbjct: 179 YSILQSYDFRELNARHGVTLQMGGSDQWGNIVSGIDLVRRMNQQQVFGLTTPLLTTSSGT 238

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KMGK+  GA+WL+      + +WQ+WRN +DADV  F +  T LP+ E DR+A L G  I
Sbjct: 239 KMGKSARGAVWLSAARLPVFEYWQFWRNTEDADVGRFLRLFTDLPVEECDRLAALPGAGI 298

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLT 354
           NEAKK++ATE T + HGR  AE+AA AA   F+   + ++ +P+ISI+   +  G+    
Sbjct: 299 NEAKKVLATEATALCHGRAAAEQAAEAARRTFEEGALSAEALPSISIAAATLHEGIPAFR 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L   +G   S  EARR ++    ++N+ ++++E   I   D    G IKLS GKK HI+ 
Sbjct: 359 LFADSGLVASNGEARRLIRGGGARLNDEVVTDEGRMIGEGDL-HDGVIKLSSGKKKHILV 417

Query: 415 H 415
            
Sbjct: 418 R 418


>gi|188533925|ref|YP_001907722.1| tyrosyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|254783606|sp|B2VEN3|SYY_ERWT9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188028967|emb|CAO96833.1| Tyrosyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 425

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNQWVEKIRQQVAPFLSFNCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERYGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+   TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDAAKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINQLEEEDKSSGKAPRAQGVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG E    A       F  ++          +    +   E+  G  L   +
Sbjct: 304 AELVTRLVHGEEGLIAAQRITRSLFAGNVTELTANDLSQLAQDGMPGIELKIGQDLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A  A S  +AR+ +++ ++ IN S+ ++ +      D        L  GKKN+ + 
Sbjct: 364 VNAELAPSRGQARKLIEAKSVSINGSLQTDAEYTFGEDDRLFGQYTLLRRGKKNYSLI 421


>gi|315222773|ref|ZP_07864660.1| tyrosyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188136|gb|EFU21864.1| tyrosyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 418

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 149/417 (35%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 3   IFDELKERGLVFQTTDEDALRKALAEGNVSFYSGYDPTADSLHLGHLVPILVMKHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  +  I+   S F+ +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDTERSLQTKDTVEGWVRSIQAQVSRFLDFENGDNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NRQYGVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N + TSPY  +Q+W N+ DAD V F K  T LP+ EI+ + K          A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDADAVRFLKIFTLLPLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS--RGMGLLTLIVK 358
           + T+VHG +  ++A     + F  +I +  +  +      +   +V     + ++ L+V 
Sbjct: 301 VVTLVHGEKAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADDNLNIVELLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG   S  +AR  +++ AI IN   I +   ++   D        +  GKK + +  
Sbjct: 361 AGVVNSKRQAREDVQNGAIYINGERIQDLDYRLTDADKLENELTVIRRGKKKYFVLT 417


>gi|291526914|emb|CBK92500.1| tyrosyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 408

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 172/408 (42%), Positives = 256/408 (62%), Gaps = 6/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G G   A+M+N
Sbjct: 63  NKPIVLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEG--KAIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  
Sbjct: 299 KLVHGEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + RR+++   + + +  I++   +  L DF   G + +  GKK     
Sbjct: 359 DGRRNIQQGGVSVADEKITDISTKYTLDDFKGEG-LIIRRGKKKFAKV 405


>gi|225570903|ref|ZP_03779926.1| hypothetical protein CLOHYLEM_07007 [Clostridium hylemonae DSM
           15053]
 gi|225160365|gb|EEG72984.1| hypothetical protein CLOHYLEM_07007 [Clostridium hylemonae DSM
           15053]
          Length = 407

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 179/410 (43%), Positives = 251/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELQARGLIAQVTDEDEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQDAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPETIQHNCDCFKRQMSKFIDFSEG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LREIG  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q++DF  L
Sbjct: 121 NADWLLDLNYIDMLREIGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQSFDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +NY C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT +GA+WL
Sbjct: 179 YQNYGCNMQFGGDDQWANMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQNGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+ D DV+   + LT LP+ EID+M   +G ++N AK+I+A E+T
Sbjct: 239 DPEKTSPFDFYQYWRNVGDTDVLKCIRMLTFLPLEEIDKMDGWEGAQLNTAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F     +Q MPT  I+ D++  G + +LTL++K+G   S +
Sbjct: 299 KLVHGEEEARKAQESARALFSQGAAAQ-MPTAEITGDDLEDGRIDILTLLLKSGLVPSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + ++   +++   +I   D  +   + L  GKKN     L
Sbjct: 358 EARRAVQQGGVAVDGEKVTDI-QEIFPSDAFAGEGMILKKGKKNFRKVVL 406


>gi|86138669|ref|ZP_01057242.1| tyrosyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824729|gb|EAQ44931.1| tyrosyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 418

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 214/413 (51%), Positives = 282/413 (68%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFVAVMMERGFLADCTDYQGLDEALMQGVKPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +FS++I Y +     A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTEAQIDDNIAGIKKVFSAYIDYDSDAPNKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y++ LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+    ++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDNSIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G E+N AK I+A
Sbjct: 246 AVWLNADMRSPYEFWQFWRNTTDADVGRFLKLYTELPVDECDRLGALAGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG E A  A   A E F+     + +PT+S+S +E+  G+ ++ LIVK+G A 
Sbjct: 306 NEVTKLLHGAEAAVAAEATAREVFEKGGIGEDLPTLSLSSEELGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  +A+R +  N  K+++  + +  L I   D  S   IKLS GKK H +  L
Sbjct: 366 SGKDAKRLINENGAKLDDKPLMDAGLMITATDLSSP--IKLSAGKKRHALVQL 416


>gi|254454555|ref|ZP_05067992.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198268961|gb|EDY93231.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 427

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 221/413 (53%), Positives = 291/413 (70%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 16  KSDFIRVMIERGFLADCTDYQGLDEAFAAGVVPAYIGFDATAKSLHVGSLIQIMMLRWLQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++ + +I +NI  IK +F+++I Y TG    A
Sbjct: 76  KTGHQPITLMGGGTTKVGDPSFRADERPLLTADQIDDNISGIKKVFAAYIDYDTGAANSA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 136 LMLNNAKWLDGLNYLDFLRDIGKHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C+LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+LSG
Sbjct: 196 FLELNRRYGCKLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLSG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN E+ S Y FWQ+WRN  DADV  F K  T LP+ E DR+  L+G EINEAK I+A
Sbjct: 256 AIWLNDEILSSYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALEGVEINEAKIILA 315

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG + A+ A   A E F+       +PT++++  +V+ G+ ++ LIVK+G A 
Sbjct: 316 NEVTALLHGTDAAQAAEKTAKEVFEKGGVGDDLPTLTLATSDVASGISIVQLIVKSGLAG 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +     K+N+ I+++  L I   D  +   IKLS GKK H +  L
Sbjct: 376 SGKEAKRLISEGGAKMNDDILTDAGLMIDAADLATP--IKLSAGKKRHALVQL 426


>gi|182419105|ref|ZP_02950359.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669225|ref|ZP_04529207.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377060|gb|EDT74630.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655112|gb|EEP52670.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 406

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 177/412 (42%), Positives = 257/412 (62%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L ERG+I Q ++  E   L     +T YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDELLERGYIKQFTHEEETRRLLENEKITFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT++IGDPS + + R+MM  + IQ N++ IK     FI +      AL
Sbjct: 61  KAGHRPIALIGGGTAMIGDPSGKTDMRQMMTKETIQHNVDSIKKQMERFIDFSDD--KAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 IVNNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y+C++++GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA
Sbjct: 177 YVLNQQYNCKMELGGDDQWSNMIAGVELVRRKAQGQAMAMTCTLLTNSQGQKMGKTVGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN E TSPY+F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKK++A 
Sbjct: 237 LWLNPEKTSPYDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINNAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA+KA  AA   F       ++PT+SI+K+E+  G  ++ ++       S
Sbjct: 297 EVTKLVHGEEEAKKAEEAATALFAGGADMSNVPTVSITKEEL--GSSIIDIMASTKILPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   + +N   +++    +  +DF   G   +  GKKN+    +
Sbjct: 355 KKEGRRLVEQGGLSLNGEKVTDVSRVLTEEDF-EDGIALIKRGKKNYNKIEI 405


>gi|302339639|ref|YP_003804845.1| tyrosyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636824|gb|ADK82251.1| tyrosyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 411

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 168/412 (40%), Positives = 252/412 (61%), Gaps = 6/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L++L ERGFI Q ++ + L+   S G  + Y+G D T  SLH GH+  L  +  LQ
Sbjct: 1   MADALTVLRERGFIQQCTDEKGLETALSSGPNSFYVGVDPTGISLHVGHMVPLFAMAHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP++++GGGT++IGDPS + E R++   + IQ+N E IK      + +  G   A 
Sbjct: 61  RAGHKPLAVVGGGTALIGDPSGKTEMRKIQSVETIQKNAEAIKKQIGRIVDFSDG--KAK 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  WL ++ YI+ LR+IG  FSVNRML+FES + RL  E  LSF+EFNY +LQ+YDF
Sbjct: 119 LLNNYDWLANLNYIEFLRDIGRHFSVNRMLTFESYKKRL--ETGLSFIEFNYQLLQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L ++ +C  Q+GG DQWGNI+ G++L  R+   ++F LT PL+T + G KMGKT  GA
Sbjct: 177 YVLNRDENCLFQIGGDDQWGNIVAGVELIRRMSGNEVFGLTFPLVTRSDGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  +  P+ ++QYWRNI DADV  F    T LP+ E+  + +L+G E+N AK+I+A 
Sbjct: 237 VFLDPNLFPPFEYYQYWRNIADADVEKFLMLFTFLPVEEVRELGRLEGSELNRAKEILAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGFA 362
           E T ++HG++EA+KA  AA   F     S    +P I +  +++  G+G+L L       
Sbjct: 297 EQTKLIHGKDEADKARDAAKAAFSAGGASDRGAIPFIELPNEDLEEGIGILELFAMTTLC 356

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +S +EARR ++     IN+  I + +  +  +  D  G + L  GKK     
Sbjct: 357 SSRSEARRLVQQGGAVINDEKIDDIEAIVTNKQLDDDGELLLRAGKKRFFRV 408


>gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107]
 gi|161387083|gb|EDQ11443.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107]
          Length = 418

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 283/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFIAVMMERGYLSDCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F ++I Y +G    A
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDAQIDDNIAGIKKVFDAYIDYDSGAGNAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN ++ SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNGDLLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A  A   A E F+       +PT+++S  +V  G+ ++ LIVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAAAEATAREVFEKGGIGDDLPTLALSAADVGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDQPLTDAGLMIDTAALASP--IKLSAGKKRHALVQLDG 418


>gi|91762139|ref|ZP_01264104.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717941|gb|EAS84591.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 409

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 189/413 (45%), Positives = 269/413 (65%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            + FL    +RGF +Q +    L  L  +  + AYIG+D TA SLH G L Q+M L  LQ
Sbjct: 1   MNKFLKEFKDRGFFYQCTGEENLSQLLDKEKIRAYIGFDCTAESLHVGSLLQIMCLRLLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI L+GGGT+ IGDPS +D++R ++  +EI++NI  I+ I  +F+     +T  +
Sbjct: 61  KHGHQPIVLLGGGTTRIGDPSGKDKTRTILSEKEIEKNINNIEKILKNFLDDKDPETKPI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN TWL ++ YI  LR++G  F++N+MLSF+SV+ RL+REQSLS++EFNYMILQAYDF
Sbjct: 121 FVNNYTWLKNLNYISFLRDVGKHFTINKMLSFDSVKIRLEREQSLSYMEFNYMILQAYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K   C LQ+GGSDQWGNI+ G+DL +R     ++ LT+PL+T ASG KMGKT SGA
Sbjct: 181 LELNKKEKCMLQIGGSDQWGNIVNGVDLIKRYSNNHVYGLTTPLITLASGAKMGKTESGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+K+  S Y++WQ+WRNIDD DV+ F K  T + + EI+ +       INE K ++A 
Sbjct: 241 VWLDKKFLSSYDYWQFWRNIDDRDVLKFLKIFTDINVDEIENIK---DDNINELKILLAN 297

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           + T+M+HG +EA K    A + F  +    ++PT  I+K  +   + +L L++ +   +S
Sbjct: 298 KATSMLHGEDEASKCQETAKQTFSENSLGDNLPTTHINKKMLDDNISILDLVILSKLESS 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +E RR +K N IKIN   IS+EK  I  +D   +  IKLS GKK HI   L 
Sbjct: 358 KSEIRRLIKGNGIKINGQAISDEKFLIT-EDLFKSSLIKLSLGKKKHIKVELI 409


>gi|257869086|ref|ZP_05648739.1| tyrosyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803250|gb|EEV32072.1| tyrosyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 420

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 17/424 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             SDF   L  RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   
Sbjct: 1   MSSDFFEELKSRGLVHQTTDESALIKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI+L+GGGT +IGDPSF+D+ R++     ++E  + IK   S FI +      A
Sbjct: 61  QQRGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVKEWSQSIKNQLSRFIDFEDQTNPA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL  +K ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYD
Sbjct: 121 ILANNYDWLGELKLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L   + C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   
Sbjct: 179 FLNLYDEHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGN 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ + T+PY F+Q+W N DD D V F K  T L + EI       L   E   A+K 
Sbjct: 239 AVWLDADKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEKEFLAAPETRVAQKA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMG 351
           +A E+TT+VHG +  E+A   +   F+  I            + +PT  +S D+    + 
Sbjct: 299 LAKEVTTLVHGAKAYEQAVHISESLFNGDIKGLSADEIAQGFKGVPTYQVSNDD---ELN 355

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+  +    S  +AR  +++ AI +N          I  +D      + +  GKK +
Sbjct: 356 IVELLTTSKIEASKRQAREDIQNGAIYVNGERQQELNYVINEEDRIGGKYVVIRRGKKKY 415

Query: 412 IICH 415
            +  
Sbjct: 416 FLLT 419


>gi|183598880|ref|ZP_02960373.1| hypothetical protein PROSTU_02315 [Providencia stuartii ATCC 25827]
 gi|188021088|gb|EDU59128.1| hypothetical protein PROSTU_02315 [Providencia stuartii ATCC 25827]
          Length = 424

 Score =  379 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 224/424 (52%), Gaps = 11/424 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  ++ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MSS--NNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  G 
Sbjct: 59  KRFQLAGHKPVALVGGATGLIGDPSFKASERKLNTAETVQEWVEKIRNQVSPFLSFDCGD 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A + NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF Y +L
Sbjct: 119 NSAKLANNYDWFGKMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T + GTK GK
Sbjct: 179 QGYDFANLNKEHGVELQIGGSDQWGNITSGIDLTRRLNQNQVFGMTVPLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + +SEID          +   
Sbjct: 239 TEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMELSEIDALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMG 351
           A+ ++A  +T +VHG E    A       F            + +    +    +  G  
Sbjct: 299 AQYVLAENVTRLVHGEEGLAAARRITESLFSGAVSDLTEADFEQLAQDGMPCITLENGAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V +    S  +AR  + SNA+ +N    ++        D        +  GKKN 
Sbjct: 359 LQQALVDSELTPSRGQARTAISSNAVAVNGQKQTDPMYVFSDSDRLFGRFTLIRRGKKND 418

Query: 412 IICH 415
            + +
Sbjct: 419 CLIN 422


>gi|291520806|emb|CBK79099.1| tyrosyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 407

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 173/408 (42%), Positives = 254/408 (62%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYDELVARGLIAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +  G   ALM+N
Sbjct: 63  NRPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNVDCFKKQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+LLR++G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NADWLMNLNYIELLRDVGAHFSVNRMLTAECYKQRM--ERGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQRYGCNLQFGGDDQWSNMLGGTELIRRKLGKNASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDADVLKCLRMLTFLPLEQIDEMDKWEGSQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F     +  MPT ++++ ++  G + +L ++V AG   + +
Sbjct: 299 KLVHGEEEATKAQESARALFSAG-SAADMPTTTLTEADLRDGSVDILGILVAAGLCPTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR+++   + +N   +++ K     +D        +  GKK +   
Sbjct: 358 EARRNVQQGGVTVNGEKVTDFKAAYTPEDIMKEDF-VVRRGKKKYSKI 404


>gi|254511424|ref|ZP_05123491.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221535135|gb|EEE38123.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 417

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 218/413 (52%), Positives = 284/413 (68%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++ + ERGF+   ++ + LD     G   AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFIATMIERGFLADCTDYQGLDEALISGCKPAYIGFDATARSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I ENI  IK +FS++I Y +  +  A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLGPEQIDENIAGIKKVFSAYIDYDSDAENKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN EM SPY FWQ+WRN  DADV  F K  T LP+ E +R+  LQG EINEAK  +A
Sbjct: 246 AVWLNAEMRSPYEFWQFWRNTTDADVGRFLKLYTELPVEECNRLGALQGAEINEAKIRLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A KA   A E F+       +PT+++S  E+  GM ++ +IVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAKAEATAREVFEKGGVGGDLPTLTLSAAELGDGMSIVQVIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L
Sbjct: 366 SGKEAKRLIAENGAKLDDAPLTDAGLMIDAGALSSP--IKLSAGKKRHALVQL 416


>gi|118443768|ref|YP_877447.1| tyrosyl-tRNA synthetase [Clostridium novyi NT]
 gi|118134224|gb|ABK61268.1| tyrosyl-tRNA synthetase [Clostridium novyi NT]
          Length = 408

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/410 (42%), Positives = 257/410 (62%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +QK 
Sbjct: 5   NVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMSHMQKA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R+M+  ++IQ N+  IK   S FI +      A+++
Sbjct: 65  GHRPIALVGGGTAMIGDPSGKTDMRKMLSEEQIQANVAGIKKQLSRFIDFSDD--KAILV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 123 NNADWLLGAKYVEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+W
Sbjct: 181 LNRKYGCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+
Sbjct: 241 LDAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSSLEGAAINEAKKVLAFEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA TAA   F+      ++PTI + KD +  G  LL +++      S  
Sbjct: 301 TKLVHGEEEAKKAQTAAEALFNGGADMSNVPTIEVEKDAI--GTSLLEILLNGKAIPSKK 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + +N+  +++    ++  D        +  GKK +    +
Sbjct: 359 EGRRLIEQGGLYMNDENVTDPNTVLQESDLKDGS-TLIKKGKKKYYRIVV 407


>gi|157825880|ref|YP_001493600.1| tyrosyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|189029762|sp|A8GNW7|SYY_RICAH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157799838|gb|ABV75092.1| tyrosyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 411

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 181/410 (44%), Positives = 276/410 (67%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ 
Sbjct: 2   SFIEEFINKGYFHQCTDLDRLTTITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQRH 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI ++GGGTS IGDP+++DE+R+++  ++I +N + IK   S FIK+G GK+DA+M 
Sbjct: 62  GHKPIVIIGGGTSKIGDPTWKDEARKILSKEDIAKNAKGIKKSLSKFIKFGDGKSDAIMF 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+ Y++ LR+ G  FS+NRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  
Sbjct: 122 DNVEWLDSLNYLEFLRDFGVHFSINRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYY 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L+K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+W
Sbjct: 182 LSKHYNCSLQLGGSDQWGNIVMGADLIRKISRKEVFGMTTPLLTTSSGAKMGKTAAGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           LN+++ SPY+++QYWRN +DADV+ FAK  + L   E++   +L  ++IN AKK +A E+
Sbjct: 242 LNEDLLSPYDYYQYWRNCEDADVIRFAKLYSELTSEELNEFERLAAEDINAAKKKLAYEL 301

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T + H  + A+ A   A++ F+     + +PT+ + +  +  G+    L    G A+S +
Sbjct: 302 TKLCHSEQAAKSALETAVKIFEQGEIDESLPTVVLEQALLQTGISAYELFHDVGLASSKS 361

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EAR+ ++    KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 362 EARKLIRGKGAKINDKLVEDENIIINTTFLLDKNAIKLSAGKKRHILVRV 411


>gi|210611476|ref|ZP_03288912.1| hypothetical protein CLONEX_01102 [Clostridium nexile DSM 1787]
 gi|210151976|gb|EEA82983.1| hypothetical protein CLONEX_01102 [Clostridium nexile DSM 1787]
          Length = 407

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/408 (43%), Positives = 249/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELKARGLIAQVTDEELISNLINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  G   A+M+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 121 NADWLLDLNYIELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDDWEGSQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F       +MPT  ++++++  G + +LT++VK+G   S +
Sbjct: 299 KLVHGEEEATKAQESARALFSSGAA-ANMPTAELTEEDLVNGSIDILTMLVKSGLVPSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR +    + ++   +++ K       F   G I L  GKKN    
Sbjct: 358 EARRAVDQGGVAVDGDKVTDIKAVFAKDVFAGEG-IVLRRGKKNFRKV 404


>gi|332184979|ref|ZP_08386728.1| tyrosyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014703|gb|EGI56759.1| tyrosyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 408

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 204/418 (48%), Positives = 282/418 (67%), Gaps = 10/418 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L  L++RG++HQ+++   LD L S  VV  YIG+D TA SLH G L Q+MLL
Sbjct: 1   MT-YQSDLLRTLNDRGYVHQMTDAAALDRLASTQVVPGYIGFDPTAPSLHVGSLVQIMLL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+TGHKPI LMGGGT  IGDPSF+DE+R+++    I+ N+  I+ IF  F+ +G G 
Sbjct: 60  RRMQQTGHKPIVLMGGGTGKIGDPSFKDEARKLLAEDGIKANVASIQRIFERFLTFGDGP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  ++YI  LRE+G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 120 TDAVMVDNADWLDKLEYIPFLREVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA+ + CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PL+TTA G KMGKT
Sbjct: 180 AYDFRELAQRHGCRLQMGGSDQWGNIVNGIELARRMDGTEVFGVTTPLITTADGGKMGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WL+++    +++WQ+WRN DD DV  F +  T LP+ EI+R+ KL+G EINEAKK
Sbjct: 240 MAGAVWLHEDQLPHFDYWQFWRNTDDRDVGRFLRLFTDLPLDEIERLEKLEGAEINEAKK 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T M  GR  AE+AA  A   F+       +P+ +++       + ++  ++  G
Sbjct: 300 ILANEATAMCRGRAAAEEAAETARRTFEEGAAGAALPSFAVA----GGSITIVDALIGLG 355

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           FA S  EARR +     +I+   I++E   I          +KLS GKK+H +  + G
Sbjct: 356 FAKSKGEARRLIAGGGARIDGEKIADENAVIA----VGGQPVKLSSGKKHHGLL-VAG 408


>gi|310767575|gb|ADP12525.1| tyrosyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 424

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 229/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   AL 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNDWVEKIRQQVAPFLDFSCGDNSALA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+          +   A+ ++
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINTLEQEDKNSGKAPRAQIVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG E    A       F  S+          +    +   E+  G+ L   +
Sbjct: 304 AELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAHDLAQLAQDGMPGVELEAGLDLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A  A S  +AR+ + + +I IN S+ +N +      D        L  GKKN+ + 
Sbjct: 364 VNAELAPSRGQARKLIDAKSISINGSLQTNAEYAFAEDDRLFGQYTLLRRGKKNYSLI 421


>gi|310657576|ref|YP_003935297.1| tyrosyl-tRNA synthetase 1 (tyrosine--tRNA ligase 1) (tyrrs 1)
           [Clostridium sticklandii DSM 519]
 gi|308824354|emb|CBH20392.1| Tyrosyl-tRNA synthetase 1 (Tyrosine--tRNA ligase 1) (TyrRS 1)
           [Clostridium sticklandii]
          Length = 408

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/411 (42%), Positives = 251/411 (61%), Gaps = 5/411 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L ERGFI Q ++  E+  L  +  V  Y GYD TA SLH GH  Q + +  LQ
Sbjct: 1   MENVFDVLKERGFIAQATHEDEIRELLGKEKVVFYTGYDPTADSLHVGHFLQAVAMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI L+GGGT++IGDPS R + R+M+  + I+EN E+ K     FI +     +A+
Sbjct: 61  LAGHTPIVLIGGGTTMIGDPSGRTDMRQMITPETIKENGERFKAQLGRFIDFTAD--NAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  WL +++YI  LREIG  FSVNRML+ E  +SR+  E+ LSFLEFNYMI+QAYDF
Sbjct: 119 MANNADWLMNLEYIPFLREIGMHFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C +Q+GG DQW NII G DL  R +  + + +T  LLTT+ G KMGKT++GA
Sbjct: 177 LELNRRHGCVMQLGGDDQWSNIIAGTDLIRRKEGKQAYGMTFNLLTTSDGKKMGKTMAGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL++E T+PY F+QYWRNI+DA V      LT LPM E+ R+  L+G EIN AK+++A 
Sbjct: 237 VWLDREKTTPYEFFQYWRNIEDASVEKCLALLTFLPMDEVRRLGTLEGSEINHAKEVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VH +E+A+ A  AA   F  +  S + PT       +  G+ +L ++ + G   S
Sbjct: 297 EVTKLVHSKEDADAAMEAARALFTNNNASANAPTTGFELARLESGIAILDVLKETGLVPS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++EARR +    I +N+  +      +   D  + G + +  GKK +    
Sbjct: 357 SSEARRLISQGGISVNDIKVEAIDFNVTA-DMLNDGVLMIKKGKKTYHQVK 406


>gi|326791163|ref|YP_004308984.1| tyrosyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541927|gb|ADZ83786.1| tyrosyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 407

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 258/410 (62%), Gaps = 5/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L IL ERGFI Q+++ +E+  L  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 2   NVLDILMERGFIEQMTHEKEIRELLEKEKVTFYIGFDPTADSLHVGHFVTVMAMSHMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GGGT+++GDP+ + + R+MM ++ I  N+   K   S FI +     +A+M+
Sbjct: 62  GHRPIALFGGGTAMVGDPTGKTDMRKMMTTEIIDHNVACFKKQMSRFISFEND--EAIMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL ++ YID LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q+YDF+E
Sbjct: 120 DNGDWLRNLNYIDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQSYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++C+LQ+GG+DQW NI+ G++L  RL   + F +T  LLT + G KMGKT  GA+W
Sbjct: 178 LYRRFNCKLQLGGNDQWSNILGGVELVRRLHGDQSFGMTFSLLTNSEGKKMGKTEKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+ D DV      LT +PM EI+ +  ++G  IN+AK+ +A E+
Sbjct: 238 LDPEKTSPYEFYQYWRNVADTDVKRCLSLLTFIPMDEINSLTAVEGSAINKAKERLAFEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA KA TAA   F    H   +PT  I+  +   GM +L+L+ +     S +
Sbjct: 298 TKIVHGEEEALKADTAAKALFLGGAHGGSIPTTEINTADFETGMDILSLLQETKLVPSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR +  N IK++   I++    I L D+     + +  GKK      L
Sbjct: 358 EGRRLVTQNGIKLDGVAITDPNSLITL-DYFKDNELMIQKGKKVFHKVIL 406


>gi|259908529|ref|YP_002648885.1| tyrosyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964151|emb|CAX55658.1| Tyrosyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478489|emb|CAY74405.1| tyrS [Erwinia pyrifoliae DSM 12163]
          Length = 424

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   AL 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNDWVEKIRQQVAPFLDFNCGDNSALA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNDRHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+          +   A+ ++
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINTLEQEDKNSGKAPRAQIVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A  +T +VHG E    A       F  S+          +    +   E+  G+ L   +
Sbjct: 304 AELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAHDLAQLAQDGMPGVELEAGLDLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A  A S  +AR+ + + +I IN S+ +N +      D        L  GKKN+ + 
Sbjct: 364 VNAELAPSRGQARKLIDAKSISINGSLQTNAEYAFAEDDRLFGQYTLLRRGKKNYSLI 421


>gi|331091728|ref|ZP_08340562.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403485|gb|EGG83044.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 407

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 248/410 (60%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELKARGLIAQVTDEELISNLVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALLGGGTGYIGDPSGRSDMRSMMTPEQIQHNCDCFKKQMSKFIDFSEG--KALMIN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 121 NADWLLGLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +NY C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQNYGCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ D DV+   + LT LP+ EID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADNDVLKCIRMLTFLPLEEIDEMDKWEGSQLNKAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  ++ E F       +MPT  + + +   G + +LT++VK+G   S +
Sbjct: 299 KLVHGEEEALKAQESSRELFTSGAA-ANMPTAELEEGDFVEGKIDILTMLVKSGLVPSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + ++   + + K +    D    G + L  GKKN     +
Sbjct: 358 EARRAVQQGGVAVDGEKVEDIKKEYAKDDLSGEG-VVLRRGKKNFRKVIV 406


>gi|71908788|ref|YP_286375.1| tyrosyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|97201327|sp|Q47B76|SYY_DECAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71848409|gb|AAZ47905.1| tyrosyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 424

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 161/421 (38%), Positives = 231/421 (54%), Gaps = 11/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++S  +  L +RG I QI++   LD L ++  VT Y G+D TA SLH GHL  +++L   
Sbjct: 2   YQSPLIQDLHDRGLIAQITDAAALDKLLTEESVTLYCGFDPTADSLHLGHLVPVLILKRF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GHKPI+L+GG T +IGDPSF+   R++     I   + KI+G    F+K+  G   A
Sbjct: 62  QEAGHKPIALVGGATGMIGDPSFKATERKLNTPDVIASWVGKIRGQVEPFLKFD-GANAA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
           +M NN  W   +  ++ +R+IG  FSVN M+  ESV+ R  + +Q +S+ EF+Y +LQ Y
Sbjct: 121 IMANNYDWFGGMNCLEFMRDIGKHFSVNAMIKKESVQQRLTREDQGISYTEFSYSLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL K Y C LQ+GGSDQWGNI+ G DL  RL    +F LT PL+T A GTK GKT S
Sbjct: 181 DFAELNKRYGCVLQIGGSDQWGNIVAGTDLTRRLHQKHVFGLTLPLITKADGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           GAIWL+ + TSPY F+Q+W N  DADV  F    T LP++ I  +           EA++
Sbjct: 241 GAIWLDPKKTSPYAFYQFWLNTSDADVYKFMNFFTFLPVARIAEIEAADKASGTKPEAQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSR-GMGLL 353
           I+A E T +VHG      A       F            + +    +   ++ +   GL+
Sbjct: 301 ILAEEATRLVHGEVALMAARRITECLFSGQLADLTENDLEQLAQDGMPGVQLEKSNTGLI 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +G A S +EAR  ++S ++ IN +        I   +        L  GKKN+ +
Sbjct: 361 DALVASGLAKSKSEARTFIQSGSVAINGNKAEALDHAIGGDELLYGRFTILRRGKKNYGL 420

Query: 414 C 414
            
Sbjct: 421 I 421


>gi|167759092|ref|ZP_02431219.1| hypothetical protein CLOSCI_01439 [Clostridium scindens ATCC 35704]
 gi|167663210|gb|EDS07340.1| hypothetical protein CLOSCI_01439 [Clostridium scindens ATCC 35704]
          Length = 407

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 179/408 (43%), Positives = 248/408 (60%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYEELQARGLIAQVTDEDEIKELVNTGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRSDMRSMMTPETIQHNCDCFKKQMSRFIDFSEG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YIDLLREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYIDLLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNLQFGGDDQWSNMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNAAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+K+  AA   F        MPT  +++++++ G + +L+++VK+G   S +
Sbjct: 299 KLVHGEEEAQKSQEAARTLFSQGAA-ADMPTTELNEEDLTDGNIDILSMLVKSGLVPSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR ++   + ++   + +       +D    G I L  GKKN    
Sbjct: 358 EARRAVQQGGVAVDGEKVEDIHATFAGEDMAGEG-IVLKKGKKNFRKI 404


>gi|333028038|ref|ZP_08456102.1| putative tyrosyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332747890|gb|EGJ78331.1| putative tyrosyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 451

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 145/422 (34%), Positives = 230/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 31  TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQR 90

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T  IGDP      R +     I E + +++     F+ +  G + A M
Sbjct: 91  AGHHPLALVGGATGQIGDPRP-TAERTLNDPATIAEWVNRLRAQIEPFLDFD-GPSAARM 148

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 149 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 208

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 209 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 268

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +     +  +   A++ +
Sbjct: 269 VWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 328

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++            + +  V+    ++ L+
Sbjct: 329 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 388

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +      + L  GKKN     +
Sbjct: 389 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHGRWLVLRRGKKNLAAVEV 448

Query: 417 CG 418
            G
Sbjct: 449 TG 450


>gi|318057733|ref|ZP_07976456.1| tyrosyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 422

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 145/423 (34%), Positives = 232/423 (54%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +     I E + +++     F+ +  G + A 
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNDPATIAEWVNRLRAQIEPFLDFD-GPSAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SG
Sbjct: 179 LELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
           A+WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +     +  +   A++ 
Sbjct: 239 AVWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTL 355
           +A E+TT+VHG  +      A+   F     ++            + +  V+    ++ L
Sbjct: 299 LAEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     
Sbjct: 359 LVETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|240145172|ref|ZP_04743773.1| tyrosine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202852|gb|EEV01137.1| tyrosine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291537628|emb|CBL10740.1| tyrosyl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291537764|emb|CBL10875.1| tyrosyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 408

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 176/410 (42%), Positives = 254/410 (61%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYDELVARGLIAQVTDEAEIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYIDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ EID M   +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFFQYWRNVSDADVLKCIRMLTFLPLEEIDAMESWEGAQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F     S HMPT+ ++  + + G + +L L+VKA  A S +
Sbjct: 299 KLVHGEEEANKAKEASHALFAGGGDSAHMPTLELTAADFADGDLDILALLVKAELAPSRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +ARR ++   + + +  +++ +       F + G + +  GKK  +   L
Sbjct: 359 DARRAVQQGGVSVADEKVTDIQTTYGADAFGADG-LVVKRGKKKFVKIVL 407


>gi|254437877|ref|ZP_05051371.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198253323|gb|EDY77637.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 427

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 218/413 (52%), Positives = 291/413 (70%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 16  KSDFIRVMMERGFLADCTDYQGLDDAFAAGVVPAYIGFDATAKSLHVGSLIQIMMLRWLQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F+++IKY TG+   A
Sbjct: 76  KTGHQPITLMGGGTTKVGDPSFRADERPLLTPDKIDDNISGIKKVFAAYIKYDTGQPNSA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 136 LMLNNAEWLDDLNYLDFLRDIGKHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C+LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+LSG
Sbjct: 196 FLELNRRYGCKLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLSG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN EM S Y FWQ+WRN  D+DV  F K  T LP++E DR+  L+G +IN AK ++A
Sbjct: 256 AIWLNDEMLSSYEFWQFWRNTTDSDVGRFLKLYTELPVAECDRLGALEGADINGAKIVLA 315

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG++ A+ A   A E F+       +PT++++  ++  G+ ++ LIVK+G A 
Sbjct: 316 NEVTTLLHGKDAAQAAEKTAKEVFEKGGIGDDLPTLTLAASDLVDGISIVQLIVKSGLAG 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +     KIN+ ++++    I   D      IKLS GKK H +  L
Sbjct: 376 SGKEAKRLISDGGAKINDDMLTDAGRMITAADL--ETPIKLSAGKKRHALVQL 426


>gi|304321919|ref|YP_003855562.1| tyrosyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300821|gb|ADM10420.1| tyrosyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 423

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 211/421 (50%), Positives = 290/421 (68%), Gaps = 9/421 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SD L +L ERGFIHQI++P  LD    QG VT YIG+D TA SLHAGHLTQ+M+L
Sbjct: 1   MTRFQSDLLRVLDERGFIHQITHPDALDQAAKQGTVTGYIGFDATADSLHAGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGT+ IGDPS +D  R+++    I  NI  I+  F  F+++G   
Sbjct: 61  HWLQQTGHRPIALMGGGTTKIGDPSGKDTQRKLLDDATIAANIAGIRQSFDPFLQFGDSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN+ WL S+ YI  LR+ G  F++NRML+F+SV+ RL REQ L+FLEFNYM++Q
Sbjct: 121 NQALMVNNDDWLSSLGYIRFLRDFGVHFTINRMLTFDSVKLRLDREQPLTFLEFNYMLMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-------LFALTSPLLTTAS 233
           AYDF EL + Y C LQMGGSDQWGNI+ G++L  R+   +       +  LT+PLLTTAS
Sbjct: 181 AYDFFELNERYGCTLQMGGSDQWGNIVNGVELCRRIAAAEGAEGSRDVCGLTTPLLTTAS 240

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G KMGKT +GA+WLN +  SPY +WQYWRN++DADVV+   R TTLP+ +I R+  L G 
Sbjct: 241 GKKMGKTENGAVWLNADRLSPYEYWQYWRNVEDADVVTMLTRFTTLPLDDIQRLGALGGA 300

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           EINEAKKI+ATE T ++HGRE AE AA  A + F+    +  +P++++++  ++ G+ L 
Sbjct: 301 EINEAKKILATETTALLHGREAAEAAAETARQTFEQGGAADDLPSVTVAEAALAAGLPLF 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
               + G  +S +E RRH+K+ A+K+N++  + E+  +  +       IKLS GKK H +
Sbjct: 361 EPFTELGLISSKSEGRRHIKAGALKVNDAPAT-EEFSLTPEYLIDGR-IKLSIGKKKHGL 418

Query: 414 C 414
            
Sbjct: 419 V 419


>gi|157370459|ref|YP_001478448.1| tyrosyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|189029771|sp|A8GDY0|SYY_SERP5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157322223|gb|ABV41320.1| tyrosyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 424

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 152/418 (36%), Positives = 224/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E ++KI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTTETVNEWVDKIRKQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYNRHQVELQIGGSDQWGNITSGIDLTRRMHQQQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL  E TSPY F+Q+W N  DADV  F K  T + ++EI+          +   A+ ++
Sbjct: 244 VWLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMDLAEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG E    A       F  ++H         +    +   ++     L   +
Sbjct: 304 AEEVTGMVHGAEGLAAAKRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDGDADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    SN +      D        L  GKK++ + 
Sbjct: 364 VNAELVPSRGQARTMIGSNAVTINGEKQSNAEYNFSDADRLFGRYTLLRRGKKHYCLV 421


>gi|302518284|ref|ZP_07270626.1| tyrosyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302427179|gb|EFK98994.1| tyrosyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 422

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 145/423 (34%), Positives = 232/423 (54%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +     I E + +++     F+ +  G + A 
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNDPATIAEWVNRLRAQIEPFLDFD-GPSAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SG
Sbjct: 179 LELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
           A+WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +     +  +   A++ 
Sbjct: 239 AVWLDPAMTTPYAFYQFWVNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTL 355
           +A E+TT+VHG  +      A+   F     ++            + +  V+    ++ L
Sbjct: 299 LAEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     
Sbjct: 359 LVETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|254461107|ref|ZP_05074523.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677696|gb|EDZ42183.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 429

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 214/414 (51%), Positives = 288/414 (69%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD +  +G + AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 18  KSDFIAVMMERGFLADCTDYQGLDEVALKGGMPAYIGFDATAESLHVGSLIQIMMLRWLQ 77

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPSFR + R ++  ++I +NI  IK +FS+++ YG G +DAL
Sbjct: 78  KTGGKPITLMGGGTTKVGDPSFRADERPLLTPEKIDDNIAGIKKVFSAYLTYGDGPSDAL 137

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 138 MINNAEWLDGLNYLDFLRDIGKHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 197

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 198 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDNQIFGLTSPLLTTSDGKKMGKSADGA 257

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T +P+ E +R+  L G EINEAK I+A 
Sbjct: 258 VWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTEMPVEECERLGALAGSEINEAKVILAN 317

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT + HG E A  A   A E F+       +PT+ ++++E+  G+ ++  IV+AG A S
Sbjct: 318 EITKLCHGAEAAGTAEATAREVFEKGGVGDDLPTLELTREELGDGLSIVQAIVRAGLAKS 377

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             +A+R +  N  KI+++ +++  L +      S   IKLS GKK H +  L G
Sbjct: 378 GKDAKRLISENGAKIDDAPLNDAGLMLDAAALASP--IKLSAGKKRHALIVLKG 429


>gi|194017821|ref|ZP_03056430.1| tyrosyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010473|gb|EDW20046.1| tyrosyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 422

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 159/422 (37%), Positives = 238/422 (56%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S  +  LS RG I Q ++   L  L S+  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MSQLMEELSFRGLIQQQTDEEGLTKLLSEEKIKLYSGFDPTADSLHIGHLLPILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ +++  +KIKG  S F+ +  G+  A+
Sbjct: 61  EAGHHPIALVGGATGLIGDPSFKKAERSLNPAEIVEQWSDKIKGQLSQFLDFEAGENPAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W+  +  I  LR+IG  F VN ML+ + V SR+  E  +S+ EF+Y+ILQ+ DF
Sbjct: 121 IVNNFDWISQMNVITFLRDIGKNFGVNFMLAKDIVSSRI--ETGISYTEFSYVILQSLDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L KN +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  
Sbjct: 179 LNLYKNENCKLQIGGSDQWGNITSGLELIRKSEAEGAKAFGLTMPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GAIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI    +      E  EA++
Sbjct: 239 GAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIASYEEKVQTAPEKREAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-------RGMGLL 353
            +A E+TT+VHGRE  E+A   +   F   I S     + +   +V          + L+
Sbjct: 299 RLAEEVTTLVHGRESLEQAVNISNALFKGEIKSLSAEEVKVGFKDVPSMEKSSTEELTLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V++  + S  +AR  + + A+ IN    +++   +  +D        L  GKK + +
Sbjct: 359 DVLVESKLSPSKRQAREDITNGAVSINGERQTDKDYVLSTEDRIENQFTVLRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 VT 420


>gi|150019425|ref|YP_001311679.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|254783582|sp|A6M293|SYY_CLOB8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149905890|gb|ABR36723.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 406

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 176/412 (42%), Positives = 258/412 (62%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L ERG+I Q ++  E   L     +T YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDELLERGYIKQFTHEEETRKLLENEKITFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +  G   A+
Sbjct: 61  RAGHRPIALIGGGTAMVGDPSGKTDMRKMLTKEDIQHNVDSIKKQMERFIDFSDG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 LANNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y+C++Q+GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA
Sbjct: 177 YELNQKYNCKMQLGGDDQWSNMIAGVELVRRKAQGEAMAMTCTLLTNSQGQKMGKTVGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   TSPY+F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKK++A 
Sbjct: 237 LWLDPAKTSPYDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG EEA+KA  AA   F       ++PT++I+K+E+  G+ +L ++       S
Sbjct: 297 EITKLVHGEEEAKKAEEAATALFAGGADMSNVPTVTIAKEEI--GLPILDVMASTKIIPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   + IN   +      +  +DF   G + +  GKKN+    +
Sbjct: 355 KKEGRRLIEQGGLSINGVKVEGVNRILTEEDF-QDGAVLIKRGKKNYNKIEI 405


>gi|167468642|ref|ZP_02333346.1| tyrosyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 415

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/412 (36%), Positives = 223/412 (54%), Gaps = 9/412 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q  GH+P+
Sbjct: 1   MPERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPV 60

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+  NN  W
Sbjct: 61  ALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDW 120

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKN 190
              +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQAYDF  L KN
Sbjct: 121 FGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDFACLNKN 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA+WL+ +
Sbjct: 181 HGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGAVWLDPK 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++A  +T 
Sbjct: 241 KTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPRAQYVLAENVTG 300

Query: 309 MVHGREEAEKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           MVHG E    A       F   +H         +    +   E++R   L   +V A   
Sbjct: 301 MVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTVELNRDADLQQALVNAELV 360

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 361 PSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKKHYCLI 412


>gi|84501152|ref|ZP_00999387.1| tyrosyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391219|gb|EAQ03637.1| tyrosyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 417

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 205/413 (49%), Positives = 284/413 (68%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F++ + ERGFI   ++ + LD   ++G+VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFMATIMERGFIADCTDYQALDEALNKGMVTAYIGYDATAKSLHVGHLMNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ ++ Y      AL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLSPAQIGENIAGMQRVFAQYLDYDREANPAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ML+N  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLDNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +DC LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+ +GA
Sbjct: 186 LELNRRHDCLLQMGGSDQWGNIVNGIDLTRRVLDTEIYGLTTPLLTTSDGRKMGKSANGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ EM SPY FWQ+WRN  DADV  F K  + LP+ E DR+  L G EIN+AK I+A 
Sbjct: 246 VWLSGEMLSPYEFWQFWRNSTDADVGRFLKIFSELPVEECDRLGALGGSEINDAKVILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E TT++HG + A  A   A E F+       +PT+ ++  EV  G+ ++ L+V+ G A +
Sbjct: 306 EATTLLHGADAARTAEATAREVFEKGGIGGDLPTLELTTGEVGGGISVVQLLVRTGLART 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N  ++N++ +++  L +      +   +KLS GKK H +  L 
Sbjct: 366 GKEAKRLIADNGARLNDAPLTDAGLVLDDASLSAP--VKLSAGKKRHALVKLS 416


>gi|238922616|ref|YP_002936129.1| tyrosyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238874288|gb|ACR73995.1| tyrosyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 428

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/408 (41%), Positives = 256/408 (62%), Gaps = 6/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 23  IYDELVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G G   A+M+N
Sbjct: 83  NKPIVLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEG--KAIMVN 140

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 141 NADWLMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 198

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 199 FQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 258

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T
Sbjct: 259 DPNKTTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELT 318

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  
Sbjct: 319 KLVHGEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRG 378

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + RR+++   + + +  +++   +  L DF   G + +  GKK     
Sbjct: 379 DGRRNIQQGGVSVADEKVTDISTKYTLDDFKGEG-LIIRRGKKKFAKV 425


>gi|154505518|ref|ZP_02042256.1| hypothetical protein RUMGNA_03055 [Ruminococcus gnavus ATCC 29149]
 gi|153794176|gb|EDN76596.1| hypothetical protein RUMGNA_03055 [Ruminococcus gnavus ATCC 29149]
          Length = 410

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 177/413 (42%), Positives = 250/413 (60%), Gaps = 7/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K      L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ
Sbjct: 3   KMQIYDELKARGLIAQVTDEERISKLVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G++PI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  G   AL
Sbjct: 63  MAGNRPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEG--KAL 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y++LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF
Sbjct: 121 MVNNADWLLDLNYVELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA
Sbjct: 179 YALYQKYGCNLQFGGDDQWSNMLAGTELIRRKLGEDASAMTITLLLNSEGKKMGKTQSGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A 
Sbjct: 239 VWLDPNKTSPFDFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAF 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFAT 363
           E+T +VHG EEA KA  +A   F     +Q MPT  +++++     + +LTL++K+G   
Sbjct: 299 ELTKLVHGEEEANKAQESARALFSQGNAAQ-MPTAELTEEDFEGNEIDILTLLLKSGLVP 357

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR ++   +  +   +++       +D  S   I L  GKKN     +
Sbjct: 358 SKSEARRAVQQGGVAADGEKVADIHAVFT-KDALSGEGIVLKKGKKNFRKVVV 409


>gi|320539632|ref|ZP_08039296.1| tyrosyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030244|gb|EFW12259.1| tyrosyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 424

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 222/418 (53%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALIERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSFR   R++  S+ + +  EKI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFRATERKLNTSETVSQWGEKIRQQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWYGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+    +F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYHRHQVELQIGGSDQWGNITSGIDLTRRMHQKPVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N +DADV  F K  T L +++I+          +   A+ ++
Sbjct: 244 VWLSAEKTSPYKFYQFWINTEDADVYRFLKFFTFLNLADINALEEEDKNSDQAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG E    A       F              +    +   ++S    L   +
Sbjct: 304 AEEVTGMVHGAEGLAAAKRITQSLFSGVLHDLTEADFAQLAQDGMPTIKLSGDADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    SN +      D        L  GKK++ + 
Sbjct: 364 VNAELVPSRGQARTMIVSNAVSINGEKQSNAEYTFSDADRLFGRYTLLRRGKKHYCLV 421


>gi|153810790|ref|ZP_01963458.1| hypothetical protein RUMOBE_01174 [Ruminococcus obeum ATCC 29174]
 gi|149833186|gb|EDM88268.1| hypothetical protein RUMOBE_01174 [Ruminococcus obeum ATCC 29174]
          Length = 409

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 174/409 (42%), Positives = 252/409 (61%), Gaps = 7/409 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VWEELKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT +IGDPS R + R+MM  + IQ NI+  K   S FI +  G   ALM+N
Sbjct: 63  NRPIALLGGGTGMIGDPSGRTDMRQMMTKETIQHNIDCFKKQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+DLLR++G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLNLNYVDLLRDVGAHFSVNRMLTAECYKQRM--ERGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+DDADV+   + LT LP+ +ID MA  +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVDDADVIKCMRLLTFLPLEQIDEMATWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATST 365
            +VHG EEA+KA   A   F     + HMPT  ++ ++      + L+T+++KAG   + 
Sbjct: 299 NLVHGEEEAKKAQEGARALFSGGADTAHMPTTELTDEDFVEEGTIDLITMLIKAGLVPTR 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +E RR ++   + I+   I++ K  +        G + L  GKK     
Sbjct: 359 SEGRRAIEQGGVSIDGEKITDIKHTVSKDTLTGDG-VVLKRGKKKFNRV 406


>gi|83953766|ref|ZP_00962487.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841711|gb|EAP80880.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 416

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 211/412 (51%), Positives = 279/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ I+ ERGF+   ++ + LD     G V AYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIRIMMERGFLADCTDYQGLDDALINGAVPAYIGYDATAKSLHVGHLMNIMVLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++ +  I  NI  ++ +F  ++ YG G +DA+
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRSDERPLLDNAAIDANIAGMQQVFEKYLSYGDGDSDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLAFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGKFLKIFTELPVEECDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A+ A   A E F+       +PT+++S  ++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAKNAEATAREVFEKGGVGDDLPTLTLSAADIGDGISIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  + N+  +++  L +      +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLITENGARYNDEPLTDAGLMVDAATLATP--IKLSAGKKRHALVQL 415


>gi|114768827|ref|ZP_01446453.1| tyrosyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549744|gb|EAU52625.1| tyrosyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 416

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 198/418 (47%), Positives = 270/418 (64%), Gaps = 3/418 (0%)

Query: 1   MP-AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    KS+FL  +  RGF+   ++ + LD    +G + AYIG+D TA SLH G L Q+M+
Sbjct: 1   MTYNPKSEFLQEMLSRGFLQDCTDIQGLDEKLLEGCMPAYIGFDATADSLHIGSLIQIMM 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L WLQKTGHKPI LMGGGT+ IGDPS +DESR+++ ++ I ENI  I+ +F  ++ +G  
Sbjct: 61  LRWLQKTGHKPIPLMGGGTTKIGDPSGKDESRQLITTEIINENINGIQKVFEKYLSFGDN 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             DA ++NN  WL  + YI+ LR+IG  F++NRM+S ESV+ RL REQ L+FLEFNYM+L
Sbjct: 121 SNDAKIINNAEWLDKLNYIEFLRDIGKHFTINRMISMESVKLRLDREQPLTFLEFNYMLL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF+EL   YD  LQMGGSDQWGNI+ GIDL  RL    +F LT+PLLT A G+KMGK
Sbjct: 181 QAYDFMELNNRYDVSLQMGGSDQWGNIVNGIDLTRRLNKKSVFGLTTPLLTKADGSKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           + +GAIWLN +  SPY FWQ+WRN  DADV  F K  T LP+SE DR+  L+G+ INEAK
Sbjct: 241 SANGAIWLNSDKLSPYEFWQFWRNTLDADVGKFLKLFTELPVSECDRLGSLEGQNINEAK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            I+A E+T M HG E A  +   A + F      +++PT+ I   E+  G+     +V+ 
Sbjct: 301 IILANEVTKMCHGEEAAISSEKTAHKVFTEDSSDENLPTLEILNTEIIDGISFTQALVRT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G  +S  EA+R +     ++N+ +I++    +   D   T   K+S  KK H +  + 
Sbjct: 361 GLVSSGKEAKRIIAGGGARLNDQVINDAGFMLYAADLQKTP--KISASKKKHALIKVI 416


>gi|170749167|ref|YP_001755427.1| tyrosyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170655689|gb|ACB24744.1| tyrosyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 423

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 217/413 (52%), Positives = 294/413 (71%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL IL+ERG+IHQ S+   +D    +G +T Y+GYD TA SLH GHL  +M+L WLQ
Sbjct: 9   KSDFLRILTERGYIHQTSDLAGIDAAALEGRLTTYVGYDCTAPSLHVGHLLSIMMLHWLQ 68

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
            TG KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N  +I+  F  F+++G G  DA+
Sbjct: 69  ATGGKPIALMGGGTTRVGDPSGRDETRKILTVEQIDANKAEIRKTFDRFLRFGEGANDAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + YI++LR++G  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQ+YDF
Sbjct: 129 MVDNAEWLTKLNYIEMLRDVGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQSYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + Y C +QMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +GA
Sbjct: 189 VELNRRYGCVMQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAAGA 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM  PY++WQ+WRN +DADV  F K  T LPM+EI R+A L G EIN AK ++AT
Sbjct: 249 VWLNPEMLKPYDYWQFWRNTEDADVARFLKLFTLLPMAEIARLAALAGSEINAAKTVLAT 308

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAGFA 362
           E T ++HGRE AE AA  A + F     +  +P++++    +  G+G+LT      A   
Sbjct: 309 EATALMHGREAAEAAAETARKTFVEGTLAADLPSVTVPSATLEAGLGVLTAFGPEVAKLV 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR +K   +++N+  +++EK  +   D  + G IKLSFGKK H++  
Sbjct: 369 PSTSEARRQIKGGGLRVNDVPVTDEKAVLGRGDVTADGVIKLSFGKKRHVLLR 421


>gi|282599716|ref|ZP_05971609.2| tyrosine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568354|gb|EFB73889.1| tyrosine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 428

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/426 (35%), Positives = 222/426 (52%), Gaps = 11/426 (2%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSNNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTAETVQEWVEKIRNQVSPFLSFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A + NN  W   +  +  LR+IG  FSVN+M++ ESV+ R  + +  +SF EF Y 
Sbjct: 121 GDNSARLANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  + K     LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TS Y F+Q+W N  DADV  F K  T + +SEI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSQYKFYQFWINTADADVYRFLKFFTFMELSEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG      A       F            + +    +    +  G
Sbjct: 301 PRAQYVLAEQVTKLVHGEAGLAAAKRITESLFSGAVSDLTEADLEQLAQDGMPNITLEVG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V +  A S  +AR  + SNA+ IN    +         D        +  GKK
Sbjct: 361 ADLQQALVDSELAPSRGQARTAISSNAVSINGQKQTEPMYVFTDADRLFGRFTLIRRGKK 420

Query: 410 NHIICH 415
           N  + +
Sbjct: 421 NDCLIN 426


>gi|34540106|ref|NP_904585.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417819|sp|Q7MXD8|SYY_PORGI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34396417|gb|AAQ65484.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 430

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 150/430 (34%), Positives = 231/430 (53%), Gaps = 22/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E     ++G+ +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHDIMPGTE--EHLNKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +     A +
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  +    LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +N  CRLQMGGSDQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YLYLYRNEGCRLQMGGSDQWGNITTGTELIRRKDGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI  +A  + +   +   +K 
Sbjct: 240 NIWLDPARTSPYAFYQFWLNVSDADAEKYIKIFTGLNQDEIAELASRQAEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH RE  + A  A+   F  S   Q               +P   + +  ++
Sbjct: 300 LAEEITVMVHSREAYDAAVEASEILFGKSTTEQLRKLDEATLLDVFAGVPQYHVERSRIA 359

Query: 348 RGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ L+ L+  A     S  E R+ +K+  + +N   +++ +  +   D  S   +    
Sbjct: 360 TGISLVDLLADATDIFPSKGELRKTVKAGGVSLNKEKVADAEQTVGEDDLLSDRYLLAQK 419

Query: 407 GKKNHIICHL 416
           GKK++ +  +
Sbjct: 420 GKKSYYLIIV 429


>gi|83942545|ref|ZP_00955006.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846638|gb|EAP84514.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 416

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 211/412 (51%), Positives = 280/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ I+ ERGF+   ++ + LD     G V AYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIRIMMERGFLADCTDYQGLDDALMNGAVPAYIGYDATAKSLHVGHLMNIMVLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++ +  I  NI  ++ +F  ++ YG G +DA+
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRSDERPLLDNAAIDANIAGMQQVFEKYLSYGDGASDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLAFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGKFLKIFTELPVEECDRLGALKGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A+ A   A E F+       +PT+++S +++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAKNAEATAREVFEKGGVGDDLPTLTLSAEDIGDGISIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  + N+  +++  L +      +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLITENGARYNDEPLTDAGLMVDADTLATP--IKLSAGKKRHALVQL 415


>gi|188994224|ref|YP_001928476.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|254783624|sp|B2RHN4|SYY_PORG3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188593904|dbj|BAG32879.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 430

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 150/430 (34%), Positives = 230/430 (53%), Gaps = 22/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E     ++G+ +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHDIMPGTE--EHLNKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +     A +
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  +    LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +N  CRLQMGGSDQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YLYLYRNEGCRLQMGGSDQWGNITTGTELIRRKDGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI  +A    +   +   +K 
Sbjct: 240 NIWLDPARTSPYAFYQFWLNVSDADAEKYIKIFTGLNQDEIAELATRQAEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH RE  + A  A+   F  S   Q               +P   + +  ++
Sbjct: 300 LAEEITVMVHSREAYDAAVEASEILFGKSTTEQLRKLDEATLLDVFAGVPQYHVERSRIA 359

Query: 348 RGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ L+ L+  A     S  E R+ +K+  + +N   +++ +  +   D  S   +    
Sbjct: 360 TGISLVDLLADATDIFPSKGELRKTVKAGGVSLNKEKVADAEQTVGEDDLLSDRYLLAQK 419

Query: 407 GKKNHIICHL 416
           GKK++ +  +
Sbjct: 420 GKKSYYLIIV 429


>gi|311069466|ref|YP_003974389.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869983|gb|ADP33458.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 422

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 237/422 (56%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  LS RG I QI++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MANLLEDLSFRGLIQQITDEEGLNKQLNEDKIRLYSGFDPTADSLHIGHLLPILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A+
Sbjct: 61  LAGHHPIALVGGATGLIGDPSGKKAERTLNTADIVVEWSQKIKNQLSRFLDFDATENPAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ++DF
Sbjct: 121 MANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ESGISYTEFSYMILQSFDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L ++  C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  
Sbjct: 179 LNLYRDQGCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GAIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K
Sbjct: 239 GAIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLL 353
            +A E+T +VHGRE  E+A   +   F  +I       + +   +V       S+ + L+
Sbjct: 299 RLAEEVTELVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSLEAERSQELTLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V++  + S  +AR  +K+ A+ IN    +     +  +D        L  GKK + +
Sbjct: 359 DVLVESKLSPSKRQAREDIKNGAVYINGERQTEIGHILSAEDRIEDQFTVLRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 IT 420


>gi|67459269|ref|YP_246893.1| tyrosyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536299|sp|Q4UL45|SYY_RICFE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|67004802|gb|AAY61728.1| Tyrosyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 411

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 186/410 (45%), Positives = 281/410 (68%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ 
Sbjct: 2   SFIEEFINKGYFHQCTDLDRLTTITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQH 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI ++GGGTS IGDP+++DE+R+++  ++I +N E IK   S FIK+G G++DA+ML
Sbjct: 62  GHKPIVIIGGGTSKIGDPTWKDEARKILSKEDIAKNAEGIKKSLSKFIKFGEGESDAIML 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  
Sbjct: 122 DNAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYY 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L+K+Y+C LQ+GGSDQWGNI+ G DL  ++    +F +T+PLLTT+SG KMGKT +GA+W
Sbjct: 182 LSKHYNCSLQLGGSDQWGNIVMGADLTRKISGKDVFGMTTPLLTTSSGAKMGKTAAGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           LN+++ SPY+++QYWRN +DAD+V FAK  + L   E+++   L  ++IN AKK +A E+
Sbjct: 242 LNEDLLSPYDYYQYWRNCEDADIVRFAKLYSELTQEELNKFESLAAEDINSAKKQLAYEL 301

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T + H  + A+ A   A++ F+     +++P + + ++ +  G+    L  +AG A+S +
Sbjct: 302 TKLCHSEQAAKSALETAVKIFEEGQIDENLPIVVLEQEVLQAGISAYELFHEAGLASSKS 361

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EAR+ ++    KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 362 EARKLIRGKGAKINDRLVEDENMIINTTFLLDKNVIKLSAGKKRHILVRV 411


>gi|167763943|ref|ZP_02436070.1| hypothetical protein BACSTE_02326 [Bacteroides stercoris ATCC
           43183]
 gi|167698059|gb|EDS14638.1| hypothetical protein BACSTE_02326 [Bacteroides stercoris ATCC
           43183]
          Length = 430

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSREEIEALTAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|300722839|ref|YP_003712132.1| tyrosine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629349|emb|CBJ89948.1| tyrosine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 427

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/425 (35%), Positives = 224/425 (52%), Gaps = 12/425 (2%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + +  L ERG + Q+++   L    +QG V+ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSNNLIKQLQERGLVAQVTDEEALAERLTQGPVSLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKPI+L+GG T +IGDPSF+   R++   + ++E + KI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPIALVGGATGLIGDPSFKATERKLNTEETVKEWVAKIRKQVSPFLSFD- 119

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A + NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +S+ EF+Y 
Sbjct: 120 GENGAELANNYDWFGEMDVLAFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISYTEFSYN 179

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ+YDF  L   Y   LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T + GTK 
Sbjct: 180 LLQSYDFANLNGKYGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGMTVPLITKSDGTKF 239

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 240 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINVLEEEDKNSGKA 299

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E    A       F              +    +   E+ + 
Sbjct: 300 PRAQYVLAEQVTGLVHGEEGLAAAKRITESLFSGAIADLTEDDFAQLAQDGMPAIELEKD 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A F  S  +AR  + SNA+ IN    S         D        L  GKK
Sbjct: 360 ADLQQALVIAEFVPSRGQARTMISSNAVSINGEKQSEPMHVFTDGDRLFGRYTLLRRGKK 419

Query: 410 NHIIC 414
           ++ + 
Sbjct: 420 HYCLI 424


>gi|237724367|ref|ZP_04554848.1| tyrosyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229437236|gb|EEO47313.1| tyrosyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 430

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMMPGTE--ELLAKEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +     A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  REIG   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEALTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSKDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLNAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|163735823|ref|ZP_02143252.1| tyrosyl-tRNA synthetase, putative [Roseobacter litoralis Och 149]
 gi|161390909|gb|EDQ15249.1| tyrosyl-tRNA synthetase, putative [Roseobacter litoralis Och 149]
          Length = 416

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 217/418 (51%), Positives = 290/418 (69%), Gaps = 3/418 (0%)

Query: 1   MP-AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    KSDF++++ ERGF+   ++ + LD    +GV +AYIG+D TA SLH G L Q+M+
Sbjct: 1   MTYTPKSDFMAVMMERGFMADCTDYQGLDEALLKGVQSAYIGFDATAKSLHVGSLIQIMM 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L W QKTGHKP++LMGGGT+ +GDPSFR + R ++  + I +NI  IK +FS++I Y   
Sbjct: 61  LRWFQKTGHKPLTLMGGGTTKVGDPSFRADERPLLGPEAIDDNIAGIKQVFSAYIDYSDA 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            T ALMLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMIL
Sbjct: 121 PTGALMLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF+EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK
Sbjct: 181 QAYDFMELHRRYGCILQLGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           + SGA+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK
Sbjct: 241 SQSGAVWLNADMFSPYEFWQFWRNTTDADVGRFLKLYTELPLDECERLGALAGSEINAAK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EITT++HG E A  AA  A + F+       +PT+++S ++V++G+ ++ LIVK+
Sbjct: 301 ITLANEITTLLHGAEAAATAAQTAHDVFEKGGVGDDLPTLTLSAEDVAQGISIVQLIVKS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G A S  EA+R +  N  K++++ ++N  L I      S   IKLS GKK H +  L 
Sbjct: 361 GLANSGKEAKRLIAENGAKLDDAPLTNAGLMIDAAALQSP--IKLSAGKKRHAMVQLS 416


>gi|289523815|ref|ZP_06440669.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502959|gb|EFD24123.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 425

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 160/426 (37%), Positives = 246/426 (57%), Gaps = 14/426 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP    + L IL ERGF+   S+P EL  +    V + YIG+D TA SLH GHL  +M L
Sbjct: 1   MPE---NVLKILQERGFVEWCSDPDELSQVFQSRVTSGYIGFDPTADSLHVGHLVPIMGL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+ GH+PI++ GGGT +IGDPS + + R+++  ++++ N+ +IK     F+ +  G 
Sbjct: 58  AWLQRAGHQPIAVAGGGTGLIGDPSGKTKERQLLTLEQVERNLSEIKKQIEHFLDFDCGA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMIL 179
           + A ++NN +WL  +  I+ LR+ G +F+VN M++ + VRSR++  + S+++ EF+Y++L
Sbjct: 118 SSAKIVNNYSWLSKLGLIEFLRDFGKYFTVNFMIARDYVRSRIEDPEKSITYTEFSYILL 177

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L ++ +C LQMGG+DQ  NII GIDL  +    K + LT PLL TASG K GK
Sbjct: 178 QAYDFYHLYQHENCALQMGGNDQQVNIIAGIDLIRKKLGAKAYGLTYPLLLTASGQKFGK 237

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINE 297
           T  G +WL+   T+PY F+Q+W N DD DV  F K  T LP+ +I  +        E  E
Sbjct: 238 TEEGTVWLSPVRTTPYKFYQFWINADDRDVEKFLKLFTFLPIDDIKEVMSNHARHPERRE 297

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--KDEVSRG------ 349
           A+KI+A EIT +VHG   A++    +   F  +   + +    +   + EV  G      
Sbjct: 298 AQKILAGEITRVVHGDNAAKRVKKVSEILFGEAYTLEDLTLELLEEIRQEVPSGNAKVIP 357

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+ ++V  G   S +EARR ++S  + +N   +  E  ++   +F     + L  GKK
Sbjct: 358 SSLVDVLVHVGACASKSEARRLIRSGGVSLNGERVDEENYEVDSDNFLYGKYMLLKLGKK 417

Query: 410 NHIICH 415
            + +  
Sbjct: 418 RYYLVE 423


>gi|329962748|ref|ZP_08300671.1| tyrosine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529582|gb|EGF56485.1| tyrosine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 430

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CRLQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCRLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   E+D +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADASRYIKIFTALTKEEVDALIAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|218133612|ref|ZP_03462416.1| hypothetical protein BACPEC_01481 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990987|gb|EEC56993.1| hypothetical protein BACPEC_01481 [Bacteroides pectinophilus ATCC
           43243]
          Length = 407

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/410 (42%), Positives = 249/410 (60%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEDEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + I  N+E  K   + FI +  G   AL++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTVETINHNVECFKKQMARFIDFSDG--KALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+D+LRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMNLNYVDVLREVGPHFSVNRMLTAECYKQRM--ERGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDTYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+PY F+QYWRN+ DADV+   K LT LP+ EI++M   +G ++N+AK+I+A E+T
Sbjct: 239 DANKTTPYEFYQYWRNVADADVIKCLKMLTFLPLEEIEKMESWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+KA  AA   F     + +MP+  +   +   G + ++TL+ K G   S +
Sbjct: 299 KLVHGEEEAQKADAAAKALFAGGGDTSNMPSTKLEDADFEDGAINIVTLVHKTGIVASRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   I ++   I++    I    F   G + L  GKK      +
Sbjct: 359 EARRAVEQGGITLDGEKIADINAVIAKDRFAGEG-LVLKKGKKTFHKITV 407


>gi|307719118|ref|YP_003874650.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532843|gb|ADN02377.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 410

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 179/413 (43%), Positives = 245/413 (59%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD L +L+ERG + Q ++   L     +G VT Y+G D T  SLHAGHL  L     L 
Sbjct: 1   MSDALPLLAERGLVKQCTDLEGLGARMQEGPVTFYLGIDPTGPSLHAGHLVPLFAATHLV 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I L+GGGT+ IGDPS + E RR++  +EI  N   I+     F  +      AL
Sbjct: 61  NAGHRAIILIGGGTARIGDPSGKTEMRRILSVEEIDRNARAIQAQIERF--FPVDGKRAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + YID LREIG  FSVNRMLSFE+ ++RL  E  LSF+EFNY +LQAYDF
Sbjct: 119 MLNNAEWLAELNYIDFLREIGRHFSVNRMLSFETYKARL--ETGLSFIEFNYQLLQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + Y C LQ+GG DQWGNI+ GIDL  R++  + + LT PL+T + G KMGKT  GA
Sbjct: 177 LVLNERYGCTLQIGGDDQWGNIVAGIDLIRRVRGEEAYGLTMPLVTRSDGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  M SPY F+QYWRN+ D DV +F K  T LP+ EI  +     + IN AK+ +A 
Sbjct: 237 LFLDPSMVSPYEFFQYWRNVPDQDVATFLKYYTFLPIDEIASLTAHTDERINLAKERLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH-SQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           E+T ++HGREEA+KA  A+   F         +P + I ++E+  G+G++ L VK     
Sbjct: 297 ELTALIHGREEADKALEASRAAFGKGGQDRSSIPFVEIPREELEHGIGVVELFVKTDLCA 356

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR +      I    + + +  ++LQD    G + L  GKK +    +
Sbjct: 357 SKSEARRLISQGGAYIEGEQVKDLEQVVRLQDVPEAGELLLRAGKKRYFRVVV 409


>gi|212692526|ref|ZP_03300654.1| hypothetical protein BACDOR_02022 [Bacteroides dorei DSM 17855]
 gi|237709152|ref|ZP_04539633.1| tyrosyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|265752681|ref|ZP_06088250.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664937|gb|EEB25509.1| hypothetical protein BACDOR_02022 [Bacteroides dorei DSM 17855]
 gi|229456848|gb|EEO62569.1| tyrosyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263235867|gb|EEZ21362.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 430

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMMPGTE--ELLAKEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +     A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  REIG   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEVLTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSKDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLNAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|150003760|ref|YP_001298504.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides vulgatus ATCC 8482]
 gi|254881011|ref|ZP_05253721.1| tyrosyl-tRNA ligase [Bacteroides sp. 4_3_47FAA]
 gi|294777421|ref|ZP_06742872.1| tyrosine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640018|ref|ZP_07994745.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|189083643|sp|A6KZL8|SYY_BACV8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149932184|gb|ABR38882.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides vulgatus ATCC 8482]
 gi|254833804|gb|EET14113.1| tyrosyl-tRNA ligase [Bacteroides sp. 4_3_47FAA]
 gi|294448489|gb|EFG17038.1| tyrosine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317388296|gb|EFV69148.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 430

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMMPGTE--ELLAKEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +     A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEALTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +S     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLSAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|225028572|ref|ZP_03717764.1| hypothetical protein EUBHAL_02851 [Eubacterium hallii DSM 3353]
 gi|224954103|gb|EEG35312.1| hypothetical protein EUBHAL_02851 [Eubacterium hallii DSM 3353]
          Length = 410

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 176/410 (42%), Positives = 254/410 (61%), Gaps = 8/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VYDELVARGLIAQVTDEEEIKELVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + I  N+E  K   S FI +  G   A+++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTKETINHNVECFKKQMSRFIDFSDG--KAMLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NADWLLDLNYVELLREVGPCFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            + Y C +Q GG+DQW N++ G +L  R        +A+T  LL  + G KMGKT SGA+
Sbjct: 179 YQKYGCNMQFGGNDQWSNMLGGTELIRRKLGPDADAYAMTITLLLNSEGKKMGKTQSGAV 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSP++F+QYWRN+ DADV+   + LT LP+ EID M   +G ++NEAK+I+A E
Sbjct: 239 WLDPNKTSPFDFYQYWRNVADADVMKCIRMLTFLPLEEIDAMDSWEGSKLNEAKEILAFE 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATS 364
           +T +VHG EEA+KA  AA   F     + +MP  +++++++  G + +L L+VK+G A +
Sbjct: 299 LTKLVHGEEEAQKAQDAARALFSNGGDTANMPACAVTEEDLRDGTVDILALLVKSGLAGT 358

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EARR++    + ++   +++ K    L DF   G   L  GKK  I  
Sbjct: 359 RSEARRNVTQGGVTLDGEKVTDFKAVYTLDDFKGEGK-VLKRGKKKFIKI 407


>gi|160891750|ref|ZP_02072753.1| hypothetical protein BACUNI_04206 [Bacteroides uniformis ATCC 8492]
 gi|156859157|gb|EDO52588.1| hypothetical protein BACUNI_04206 [Bacteroides uniformis ATCC 8492]
          Length = 430

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T L   EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTALSKEEIDALTAEHDAAPHLRVLQKC 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|318078324|ref|ZP_07985656.1| tyrosyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 438

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 145/422 (34%), Positives = 232/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 18  TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +     I E + +++     F+ +  G + A M
Sbjct: 78  AGHRPLALVGGATGQIGDPRP-TAERTLNDPATIAEWVNRLRAQIEPFLDFD-GPSAARM 135

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 136 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 195

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 196 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +     +  +   A++ +
Sbjct: 256 VWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 315

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++            + +  V+    ++ L+
Sbjct: 316 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 375

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     +
Sbjct: 376 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVEV 435

Query: 417 CG 418
            G
Sbjct: 436 TG 437


>gi|164688146|ref|ZP_02212174.1| hypothetical protein CLOBAR_01791 [Clostridium bartlettii DSM
           16795]
 gi|164602559|gb|EDQ96024.1| hypothetical protein CLOBAR_01791 [Clostridium bartlettii DSM
           16795]
          Length = 408

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/393 (43%), Positives = 253/393 (64%), Gaps = 4/393 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q+++  EL  L + G  T YIG+D TA SLH GH   L L+  LQ +G
Sbjct: 3   VYEELVERGLIAQVTDEDELKELINAGKATFYIGFDATADSLHVGHFMALCLMKRLQMSG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT++IGDPS R + R+MM  + I  N E  K   S FI +      A+++N
Sbjct: 63  NRPIALVGGGTTMIGDPSGRSDMRQMMTPEMINHNCECFKKQMSKFIDFSDD--KAVLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LRE+GS FSVNRMLS E  + R+ RE  L+FLEFNYMI+QAYDF +L
Sbjct: 121 NADWLLDLNYVDVLREVGSCFSVNRMLSAECYKQRMDREGGLTFLEFNYMIMQAYDFYQL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C++Q+GG+DQW N++ G DL  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 181 YQKYGCQMQLGGNDQWSNMLAGTDLIRRKLGENAYAMTITLLLNSEGKKMGKTQSGAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   K LT LP+ EI  M K +G E+N+AK+I+A E+T
Sbjct: 241 DPNKTSPFEFYQYWRNVSDADVIKCLKMLTFLPLEEIKEMEKWEGSELNKAKEILAYELT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
           T+VH  E+A+ A  +A   F    ++ +MPT+ ++  ++  G + +++L+VKA  A S +
Sbjct: 301 TLVHSEEDAKAAQESARALFSQG-NAANMPTVELADSDLEDGKIDIISLLVKADLAPSRS 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           EARR+++   + +N   +++ +  +  ++    
Sbjct: 360 EARRNIQQGGVSVNGEKVTDIQATVAKEELVEG 392


>gi|254293802|ref|YP_003059825.1| tyrosyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042333|gb|ACT59128.1| tyrosyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 421

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 190/415 (45%), Positives = 271/415 (65%), Gaps = 2/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  +S+ L  L ERG+++QI++   LD      +  AY GYD TASSLH GHL  +M+L
Sbjct: 7   MP--QSELLRTLFERGYVYQITDEAGLDEYAKSEMPIAYAGYDATASSLHVGHLVSIMML 64

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ G KPI LMGGGT+ IGDP+ +++SR ++  +EIQ+NI  IK +F  F+ +G G 
Sbjct: 65  RRLQQAGGKPIVLMGGGTTKIGDPTDKEKSRPILTEEEIQKNINGIKSVFEKFLTFGDGP 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  I Y++ LR+ G  F++N+M+  ++V+ RL+ EQ  +FLEFNY +LQ
Sbjct: 125 TDAVMVNNDDWLGKINYLEFLRDYGKLFTINKMIMQDTVKRRLENEQPYTFLEFNYALLQ 184

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +    RLQ+GGSDQWGNI  G +L  R++  + F  T+PLLTTASG KMGKT
Sbjct: 185 AYDFVELNRRLKVRLQLGGSDQWGNITNGTELCRRVENVQAFGFTTPLLTTASGVKMGKT 244

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN ++ SPY++WQ+WRN +DADV  F K  T LP+ +I  +  L+G +IN+AK 
Sbjct: 245 VGGAVWLNADLKSPYDYWQFWRNTEDADVGKFLKLFTDLPLDKIAELESLKGAQINDAKI 304

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   T+M+HG E A++A  AA + F     +  MP+  ++  E+  G  ++   V +G
Sbjct: 305 ALADAATSMLHGEEAAKEANAAAAKVFAEGATADGMPSFDVAMSEIESGYSVIDGFVASG 364

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  E RRH+K+ A K+N   I++E   I   D +S    +LS GKK H    
Sbjct: 365 LAKSKGEVRRHIKAGAAKLNGETITDELATIGTADLESDNTARLSIGKKRHARLT 419


>gi|270295162|ref|ZP_06201363.1| tyrosyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274409|gb|EFA20270.1| tyrosyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 430

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T L   EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTALSKEEIDALTAEHEAAPHLRVLQKC 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDENTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|329889566|ref|ZP_08267909.1| tyrosyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844867|gb|EGF94431.1| tyrosyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 426

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 205/414 (49%), Positives = 286/414 (69%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            AFKSDFL ++  RG+IHQI++P ELD   + GVVT YIG+D TA SLH GHL Q+MLL 
Sbjct: 12  TAFKSDFLRLMKARGYIHQITHPVELDEAAASGVVTGYIGFDATAPSLHVGHLIQIMLLR 71

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKPI LMGGGT+ +GDPSF+D  R ++  ++I ENI  IKG+F  F+ +G G T
Sbjct: 72  RLQQAGHKPIVLMGGGTTKVGDPSFKDTQRPLLTEEKIAENIAGIKGVFEKFLTFGDGPT 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+ML+N+ WL  + Y+  LR+ G+ F++NRMLSF+SV+ RL REQ L+FLEFNYM++QA
Sbjct: 132 DAVMLDNDEWLSQLGYLQFLRDYGTHFTINRMLSFDSVKLRLDREQPLTFLEFNYMLMQA 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + Y C LQMGGSDQWGNII G++L  ++     F LT+PLL+TASG KMGKT+
Sbjct: 192 TDFLELNRRYGCSLQMGGSDQWGNIINGVELTRKVDHKAAFGLTTPLLSTASGQKMGKTV 251

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN +  SP+++WQYWRN +D DV  F +  T LP+ +I+R   L+G EIN+AKK 
Sbjct: 252 GGAVWLNADALSPFDYWQYWRNTEDGDVGRFMRLFTDLPLDQIERYEALEGAEINDAKKA 311

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T+M+HG E A+ A  AA   F+    S  +PT+ + +DEV   M +  +  KAG 
Sbjct: 312 LADATTSMLHGVEAAQAARAAAEAAFEKGQLSADLPTVELPRDEVIGAM-IAAVTTKAGL 370

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + S  EARR  +   +++N+ ++++    I+  D ++ G +KL  GKK  ++  
Sbjct: 371 SASNGEARRLAQGGGLRLNDEVVNDGARLIEEADLNTDGVLKLGAGKKKLVLVR 424


>gi|126735683|ref|ZP_01751428.1| tyrosyl-tRNA synthetase, putative [Roseobacter sp. CCS2]
 gi|126714870|gb|EBA11736.1| tyrosyl-tRNA synthetase, putative [Roseobacter sp. CCS2]
          Length = 416

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 213/412 (51%), Positives = 287/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++  RGF+   ++ + LD   S+GVV AYIG+D TA SLH G L Q+M++ WLQ
Sbjct: 6   KSDFMNVMMTRGFLADCTDYQGLDEALSKGVVPAYIGFDATAKSLHVGSLIQIMMMRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +FS+++ YG   TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLGPDQIDDNIAGIKQVFSAYLTYGDAPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MINNAEWLDGLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M +PY FWQ+WRN  DAD   F K  T LP+ E +R+  L+G +IN AK I+A 
Sbjct: 246 VWLNADMCAPYEFWQFWRNTTDADTGRFLKLYTELPIEECERLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG   A+ A   A E F+       +PT+++S D++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAAAAQAAEATAREVFEKGGVGDDLPTLTLSADDLGDGISIVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K+N++ +    + I      +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKLNDAPLHEAGMMIDADALSTP--IKLSAGKKRHALVQL 415


>gi|315640615|ref|ZP_07895721.1| tyrosine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483643|gb|EFU74133.1| tyrosine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 428

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 165/420 (39%), Positives = 242/420 (57%), Gaps = 11/420 (2%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
              SDF   L +RG + Q ++   L+   ++  V  Y+G+D TA SLH GHL  +++L  
Sbjct: 7   NMSSDFFQELKDRGLVFQTTDEAALEKQLNEESVKLYVGFDPTADSLHIGHLLPILMLRR 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH PI+L+GGGT +IGDPSF+D+ R++     +QE  + IK   S FI +   K  
Sbjct: 67  FQLQGHVPIALVGGGTGMIGDPSFKDQERQLNTLSIVQEWSQSIKDQLSRFIDFDDEKAP 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++ NN  WL SI  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAY
Sbjct: 127 AVLANNYDWLGSISLIDFLRDVGKNFTINYMMSKESVKRRI--ESGISYTEFAYQLLQAY 184

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF++L +N+ C LQ+GGSDQWGNI  GI+L  R K  + F LT PL+T A GTK GKT  
Sbjct: 185 DFLKLYENHGCLLQLGGSDQWGNITSGIELLRREKEVQGFGLTMPLITKADGTKFGKTEG 244

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
            A+WL+ E T+PY F+Q+W N DD DV+ F K  T L ++EI           E   A+K
Sbjct: 245 NAVWLDPEKTTPYEFYQFWINTDDRDVIKFLKYFTFLSLTEITAIEQEFTAAPESRVAQK 304

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV--SRGMGLL 353
            +A E+TT+VHG E+  +A   +   F   + +     IS     +   E+    G  LL
Sbjct: 305 ALAKEVTTLVHGEEKYRQAVHISQALFSGELKTLSSEEISQGFKGVPSYEITTEDGSQLL 364

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +   +S  +AR  L++ AI +N   I +   +++ +D  S  +  +  GKK + +
Sbjct: 365 DLLVASKIVSSRRQAREDLQNGAIYVNGDRIQSVDYELREEDKLSGKHTIIRRGKKKYFL 424


>gi|126728742|ref|ZP_01744557.1| tyrosyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710672|gb|EBA09723.1| tyrosyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 429

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 213/425 (50%), Positives = 282/425 (66%), Gaps = 14/425 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   S GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGYLADCTDYQALDDKLSHGVVTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  +K +F+ ++ YG       
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMKQVFAKYLSYGDAPTMPS 125

Query: 119 ------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                     ALMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFL
Sbjct: 126 SSEAVGPDNVALMLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFL 185

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EFNYMILQAYDF+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+
Sbjct: 186 EFNYMILQAYDFLELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTS 245

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
            G KMGK+  GA+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E  R+  L G
Sbjct: 246 DGKKMGKSQGGAMWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECARLGALAG 305

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
            EINEAK ++A E+TT+ HG E A  A   A E F+       +PT+ ++ +EV  G+ +
Sbjct: 306 SEINEAKIVLANEVTTLCHGSEAAAAAEATAREVFEKGGVGDDLPTLELTSEEVGDGISV 365

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + LIV++G   S  EA+R +  N  +++++ +++  L +      S   IKLS GKK H 
Sbjct: 366 IQLIVRSGLVKSGKEAKRLIAENGARLDDAPLTDAGLMLDRGALASP--IKLSAGKKRHA 423

Query: 413 ICHLC 417
           +  L 
Sbjct: 424 LIKLS 428


>gi|288574419|ref|ZP_06392776.1| tyrosyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570160|gb|EFC91717.1| tyrosyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 441

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 167/420 (39%), Positives = 257/420 (61%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L +L +RG+I   S+P EL+ L  +  VTAY+G+D TA SLH GHL  LM L WLQK 
Sbjct: 19  DALKVLRDRGYIDWCSHPEELEELFREDRVTAYVGFDPTADSLHVGHLIPLMGLAWLQKL 78

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L GGGT +IGDPS + + R ++  ++I++N+E +K   S F+ + +G   AL++
Sbjct: 79  GHRPVVLAGGGTGMIGDPSGKSKERNLLSIEQIRKNVEAVKKQLSHFVSFDSGDNSALLV 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  WL S+ +++ LR++G  F+VN M++ E V+SRL   E+S+SF EF+Y +LQAYDF+
Sbjct: 139 NNYDWLNSMTFLEFLRDVGKHFTVNYMVAKEHVKSRLGDPEKSISFTEFSYTLLQAYDFL 198

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C+LQMGG+DQ GNI+ GIDL  +    +++  T+PLL T+SGTK GKT  GA+
Sbjct: 199 HLYRTYGCKLQMGGNDQQGNIVSGIDLIRKTDGAQVYGGTNPLLLTSSGTKFGKTEGGAV 258

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL++  TSPY F+Q+W N +D  V    K  T L + +I  + +      E  EA+KI+A
Sbjct: 259 WLDRAKTSPYRFYQFWVNSEDQAVEKLLKLFTFLSLEKISEIMEEHSVSPERREAQKILA 318

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSR-GMGLLTL 355
            E+T++VHG++ AE A  A+   F  +     + +         +   EV      L+ +
Sbjct: 319 MELTSLVHGKDRAETARRASEILFGGAFDPVELSSEMMKVLAAEVPYFEVGDISRPLIDI 378

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +  ++S  EARR +K   + +N + IS+E++++        G + L  GKK   +  
Sbjct: 379 MVDSAVSSSKGEARRLIKGGGVSVNGNRISDERMELDGSWLLQEGYLFLKVGKKKFFVLK 438


>gi|217977779|ref|YP_002361926.1| tyrosyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254783617|sp|B8EI82|SYY_METSB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|217503155|gb|ACK50564.1| tyrosyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 419

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 217/413 (52%), Positives = 292/413 (70%), Gaps = 1/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +SDFL  L  RG++HQ S+   +D     G + AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 8   RSDFLQTLLLRGYVHQCSDLEGIDAKAQSGELVAYIGFDCTAPSLHVGSLVQIMMLRWLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPS +DESR+++  + I+ N   I  +FS FI +G GKT AL
Sbjct: 68  KTGGKPIALMGGGTTQVGDPSGKDESRKILSLETIEANKAGIASVFSKFIAFGDGKTQAL 127

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL ++KY+D LR++G  FSVNRM++ +SV+ RL+R+Q LSFLEFNYM LQAYDF
Sbjct: 128 MVDNAEWLTALKYVDFLRDVGRHFSVNRMMAMDSVKLRLERDQELSFLEFNYMCLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + Y C LQMGGSDQWGNI+ G+DLG RL  P+L+ALTSPLLTTASG KMGKT  GA
Sbjct: 188 VELNRRYGCVLQMGGSDQWGNIVTGLDLGRRLGAPQLYALTSPLLTTASGAKMGKTAQGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN++M   +++WQ+WRN +D DV  F K  T LP+ E  R+  L G EINEAKKI+AT
Sbjct: 248 VWLNEDMLPVFDYWQFWRNCEDRDVGRFLKLFTELPLDETVRLESLGGAEINEAKKILAT 307

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T+M HGRE A  A  AA + F+    ++ +P+I I   E+  G+G+L   VKAG   S
Sbjct: 308 EATSMAHGREAALLAEEAARQTFEEGALAESLPSIDIDAAEIEAGLGVLAAFVKAGLVAS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EARR +K   +++N++ +++E+  ++  D  S   IKLS G+K H++  L 
Sbjct: 368 TSEARRQIKGGGLRVNDAPVADERAALQQGDVASG-VIKLSLGRKRHVLLKLV 419


>gi|218531163|ref|YP_002421979.1| tyrosyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218523466|gb|ACK84051.1| tyrosyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 423

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 218/413 (52%), Positives = 297/413 (71%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L WLQ
Sbjct: 9   KSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHWLQ 68

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G G   A+
Sbjct: 69  KTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGEGGNGAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+YDF
Sbjct: 129 MVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +GA
Sbjct: 189 VELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAAGA 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++AT
Sbjct: 249 VWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVLAT 308

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAGFA 362
           E T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A   
Sbjct: 309 EATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAKLV 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 369 PSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLTAEGVIKLSFGRKKHVLLR 421


>gi|163852404|ref|YP_001640447.1| tyrosyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163664009|gb|ABY31376.1| tyrosyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 423

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 217/413 (52%), Positives = 296/413 (71%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L WLQ
Sbjct: 9   KSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHWLQ 68

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     A+
Sbjct: 69  KTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNGAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+YDF
Sbjct: 129 MVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +GA
Sbjct: 189 VELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAAGA 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++AT
Sbjct: 249 VWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVLAT 308

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAGFA 362
           E T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A   
Sbjct: 309 EATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPSALLEAGLGVLTAFGPDYAKLV 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 369 PSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLTAEGVIKLSFGRKKHVLLR 421


>gi|333029513|ref|ZP_08457574.1| Tyrosyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740110|gb|EGJ70592.1| Tyrosyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 430

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 229/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVDELKWRGMVHDMMPGTE--ELLAKEQVSAYVGIDPTADSLHIGHLVSVMMLRHLQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP +L+GG T +IGDPS +   R ++    ++ N   IK   S F+ + +  +  A +
Sbjct: 60  GHKPFALIGGATGMIGDPSGKSLERNLLDDTTLRHNQAAIKKQLSKFLDFDSDAENKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D +R++G   +VN M++ +SV+ RL  +    LSF EF Y +LQAYD
Sbjct: 120 VNNYDWMKNFTFLDFVRDVGKHITVNYMMAKDSVKKRLTGEARDGLSFTEFTYQLLQAYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++   +LQMGGSDQWGNI  G +L  R    ++F LT PL+T A G K GKT SG
Sbjct: 180 YLHLLESRGVKLQMGGSDQWGNITTGAELIRRTNGQEVFGLTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL++  TSPY F+Q+W N+ D D   + K  TTL    +  + +           +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDEDAARYIKIFTTLSQEVVTELTEEHSKAPHERILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A EIT MVH  E+ E A  A+   F  S                 + +P   I K  ++
Sbjct: 300 LAKEITVMVHSEEDYEAAVEASEILFGKSTSETLRKIDEDTLLSVFEGVPQFEIEKSLLN 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G   + L V  A    S  E R+ +K+N + +N   + + ++ I  ++  +   + +  
Sbjct: 360 DGTKAIDLFVDHAEIFPSKGELRKLIKNNGVSLNKEKLDDPEMLITDKELLNNKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLV 427


>gi|162148158|ref|YP_001602619.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786735|emb|CAP56318.1| putative tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 413

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 204/415 (49%), Positives = 272/415 (65%), Gaps = 4/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD     G V  YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLQEAEARGFIFQCTDIDALDAALQAGPVAGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH+P++LMGGGT+ IGDPSFR+E+R++M  + I  N+  I+G    F+++  G 
Sbjct: 59  RLMQKHGHRPVALMGGGTAKIGDPSFREEARQLMTDETIAANLRGIEGCLRQFLQFD-GA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A + NN  WL  + YIDLLR++G  FSVNRML+F+SVRSRL+REQ L+FLEFNY ILQ
Sbjct: 118 AGARLANNADWLDRLSYIDLLRDVGVHFSVNRMLAFDSVRSRLEREQGLTFLEFNYSILQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF EL++     LQMGGSDQWGNI+ GIDL  R    ++F LT+PLLTTASG KMGK+
Sbjct: 178 SYDFRELSRTQGVTLQMGGSDQWGNIVSGIDLVRRTDQKQVFGLTTPLLTTASGAKMGKS 237

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWL+      + +WQ+WRN+DDADV  F +  T LP++E DR+A L G EINEAKK
Sbjct: 238 ARGAIWLSASRLPIFEYWQFWRNVDDADVGRFLRLFTDLPIAECDRLAALGGTEINEAKK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T + HGR EA+ AA AA   F+       +P  +I+ D ++ G+    L V++G
Sbjct: 298 VLATEATALCHGRAEADAAAEAARRTFEDGAAPAALPGTTIAADLLAAGIPAFRLFVESG 357

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR ++    +IN+  + +E   I   D      IKLS G+K+HI+  
Sbjct: 358 MAASNGEARRLIRGGGARINDVAVQDEGQVITTTDLADGA-IKLSSGRKHHILVR 411


>gi|85059426|ref|YP_455128.1| tyrosyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|97202004|sp|Q2NT02|SYY_SODGM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84779946|dbj|BAE74723.1| tyrosyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 424

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 221/419 (52%), Gaps = 9/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++ + L    + G +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEKALAERLAAGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  ++ +QE +EKIK   S F+ +  G   A+ 
Sbjct: 64  AGHRPVALVGGATGLIGDPSFKATERKLNTAETVQEWVEKIKRQVSPFLDFDCGDNSAVA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  L +IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLLDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL    ++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVALQIGGSDQWGNITSGIDLTRRLHQNTVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+   TSPY F+Q+W N  D+DV  F K  T L ++ ID          +   A+ ++
Sbjct: 244 VWLDPSKTSPYKFYQFWINTADSDVYLFLKFFTFLDLAAIDALEQEDRASDKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG +    A       F              +    +    + R   L   +
Sbjct: 304 AEEVTRMVHGEQGLAAAKRITASLFSGALADLTEDDFAQLAQDGMPTVHLERVADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V A    S  +AR  + SNA+ +N    ++        D   +    L  GKK++ + +
Sbjct: 364 VAAELVPSRGQARTLISSNAVSVNGEKQASIDYVFDDADRLYSRYTLLRRGKKHYCLLN 422


>gi|294677248|ref|YP_003577863.1| tyrosyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476068|gb|ADE85456.1| tyrosyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 416

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 209/412 (50%), Positives = 279/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL ++ ERGF+   ++ +ELD   + G+VT YIGYD TA+SLH GHL  +MLL W Q
Sbjct: 6   KSEFLRVIIERGFLADCTDLQELDTALAGGMVTCYIGYDATAASLHVGHLLNIMLLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++  + I ENI  ++ +F+ ++ Y      AL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPERIDENIAGMQRVFARYLDYKDDGNGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MRNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDREIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM SPY FWQ+WRN  DADV  F K  T LP+ E DR+ KL+G EIN AK I+A 
Sbjct: 246 VWLNGEMLSPYEFWQFWRNTTDADVGRFLKLYTDLPVEECDRLGKLEGSEINGAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  A   A E F+     + +P +++  +E++ G+ L  L+V++G A +
Sbjct: 306 EVTTLLHGAEAAAAAEATAREVFEKGGVGEDLPRLTLGAEELAEGISLAQLVVRSGLAKT 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             + +R +    +K+++ I  +        D      +KLS GKK H +  L
Sbjct: 366 GKDGKRLISEGGLKVDDEICLDAGRMFSAADLAQP--VKLSAGKKRHALVSL 415


>gi|268592621|ref|ZP_06126842.1| tyrosine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311759|gb|EFE52212.1| tyrosine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 424

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 11/424 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  ++ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MSS--NNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  G 
Sbjct: 59  KRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTTETVQEWVEKIRNQVSPFLSFDCGD 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A + NN  W   +  +  LR+IG  FSVN+M++ ESV+ R  + +  +SF EF Y +L
Sbjct: 119 NSARLANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF  + K     LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T A GTK GK
Sbjct: 179 QGYDFANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGMTVPLITKADGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T  GA+WL+ + TS Y F+Q+W N  DADV  F K  T + + EI+          +   
Sbjct: 239 TEGGAVWLDSKKTSQYKFYQFWINTADADVYRFLKFFTFMELDEINALEEEDKNSGKAPR 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMG 351
           A+ ++A  +T +VHG E    A       F            + +    +    +  G  
Sbjct: 299 AQYVLAELVTKLVHGEEGLAAAKRITESLFSGAVSDLTEADFEQLAQDGMPCITLEAGAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V +    S  +AR  + SNA+ IN    +         D        +  GKKN 
Sbjct: 359 LQQALVDSELVPSRGQARTTISSNAVSINGQKQTEPMYVFSDADRLFGRYTLIRRGKKND 418

Query: 412 IICH 415
            + +
Sbjct: 419 CLIN 422


>gi|298483303|ref|ZP_07001482.1| tyrosine--tRNA ligase [Bacteroides sp. D22]
 gi|295085907|emb|CBK67430.1| tyrosyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298270620|gb|EFI12202.1| tyrosine--tRNA ligase [Bacteroides sp. D22]
          Length = 430

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQAAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLTAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|225155936|ref|ZP_03724420.1| Tyrosine--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224803289|gb|EEG21528.1| Tyrosine--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 433

 Score =  376 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 139/431 (32%), Positives = 221/431 (51%), Gaps = 21/431 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG +   ++   L    ++G VT YIG+D T  SLH GHL   + L   Q  
Sbjct: 2   NLIEDLQWRGLLADCTDLDALAKRLNEGPVTLYIGFDPTGDSLHVGHLMGQLTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG--TGKTDAL 124
           GH+ + L GG T +IGDPS +   R ++  +++  N+ +IK   S  + +        A 
Sbjct: 62  GHRVLPLAGGATGMIGDPSGKSAERNLLTPEQLAHNVARIKQQLSRLLDFDPAHTPNPAR 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  W   I ++D LR++G  FS+N ML+ +SVRSR++ +  +S+ EF+Y +LQA+DF
Sbjct: 122 LVDNADWTRGISFLDFLRDVGKHFSLNVMLAKDSVRSRMEGDTGISYTEFSYQLLQAHDF 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +++ C LQ+GGSDQWGNI  G+D   R      +  T PL+T A G+K GKT  GA
Sbjct: 182 YILRRDHGCELQIGGSDQWGNITAGVDFIRRKLGVPAYGWTFPLITKADGSKFGKTEGGA 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q++ N +DA V  + ++ T L   EI+ +           EA + +
Sbjct: 242 VWLDPEKTSPYKFYQFFVNTEDAKVCEYLRKFTFLGRPEIEELEAKHAANPGAREAHRAL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS----- 347
           A EIT  VHG+   + A  A+   F   I              +PT  + +  +      
Sbjct: 302 AREITRTVHGQAALDAALKASDILFGAEIGDTTESTFRDVVGEVPTKPLERIRLETTPDA 361

Query: 348 --RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              G  L  L+V AG A S  +AR+ ++   + +NN  +      +   D      + L 
Sbjct: 362 GVAGAPLTELLVHAGLAPSKGQARKDIEGGGVYLNNVRVGESARMVTPADLLFGKYLLLR 421

Query: 406 FGKKNHIICHL 416
            GK+ + +  +
Sbjct: 422 KGKRTYAVLDV 432


>gi|311746911|ref|ZP_07720696.1| tyrosine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578600|gb|EAZ82764.1| tyrosine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 430

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 148/432 (34%), Positives = 230/432 (53%), Gaps = 23/432 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            + F+  L  RG +  ++    L+   S+GV +AY+G+D TA SLH GHL  +M L   Q
Sbjct: 1   MNSFIEELRWRGMLQDMTPE--LEEHLSKGVASAYLGFDPTADSLHIGHLVGVMTLLHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDA 123
           + GHKP +L+GG T +IGDPSF+   R ++  + +  N+  I+   S F+ + G     A
Sbjct: 59  RAGHKPFALVGGATGMIGDPSFKSAERNLLNKETLDHNVSCIQNQLSKFLDFSGETNNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  W+    +++ +R++G   +VN M++ +SV+ RL+    LSF EF+Y ++Q YD
Sbjct: 119 ELVNNYDWMSEFSFLEFIRDVGKHITVNYMMAKDSVKRRLEDGNGLSFTEFSYQLIQGYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L KN +C +Q+GGSDQWGNI+ G +L  R+     FALT PL+T A G+K GKT  G
Sbjct: 179 FYHLWKNENCTIQLGGSDQWGNIVTGTELIRRMGGGSAFALTVPLITKADGSKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           ++WL+ E TSPY F+Q+W N+ D D   + +  TTL    I+    A  +       +K 
Sbjct: 239 SVWLDPEKTSPYAFYQFWLNVSDEDASKYIRIFTTLDQQTIESLEAAHAEAPHQRALQKE 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVS 347
           IA  +T MVHG+EE + A  A+   F  S                   +P + +SKDE +
Sbjct: 299 IAKNVTVMVHGQEELDMAIKASEILFGKSSTEDLASLDERTFLQVFDGVPQVQLSKDEFA 358

Query: 348 RGMGLLTLIVKAG---FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
                L L  +A       S  EAR+ ++   + IN   +++    +          + +
Sbjct: 359 GFESTLDLFGEATQGVIFKSKGEARKMIQGGGVSINKEKLTDPNAALSCS-LLQGKYLLI 417

Query: 405 SFGKKNHIICHL 416
             GKKN+ I  +
Sbjct: 418 QRGKKNYYIVEI 429


>gi|332364486|gb|EGJ42257.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 419

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 224/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YVLNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFESAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  + A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQDALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVLT 418


>gi|240139739|ref|YP_002964216.1| tyrosine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240009713|gb|ACS40939.1| tyrosine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 423

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 217/413 (52%), Positives = 296/413 (71%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L WLQ
Sbjct: 9   KSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHWLQ 68

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     A+
Sbjct: 69  KTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNGAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+YDF
Sbjct: 129 MVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +GA
Sbjct: 189 VELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAAGA 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++AT
Sbjct: 249 VWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVLAT 308

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAGFA 362
           E T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A   
Sbjct: 309 EATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAKLV 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 369 PSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLAAEGVIKLSFGRKKHVLLR 421


>gi|153816262|ref|ZP_01968930.1| hypothetical protein RUMTOR_02511 [Ruminococcus torques ATCC 27756]
 gi|317501761|ref|ZP_07959947.1| tyrosine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088718|ref|ZP_08337628.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846445|gb|EDK23363.1| hypothetical protein RUMTOR_02511 [Ruminococcus torques ATCC 27756]
 gi|316896794|gb|EFV18879.1| tyrosine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407241|gb|EGG86744.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 407

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 175/408 (42%), Positives = 251/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L + G    YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYEELQARGLIAQVTDEERIRDLVNSGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++I  N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEQICHNCDCFKEQMSKFIDFSEG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 121 NADWLLDLNYVEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMQFGGDDQWSNMLAGTELIRRKLGEDAGAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+KA  +A   F    ++  MPT  +++++++ G + +LT++VK+G  TS +
Sbjct: 299 KLVHGEEEAKKAQESARALFSKG-NAAEMPTAQLTEEDLTDGKIDILTMLVKSGLVTSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR ++   + ++   +S+       ++    G I L  GKKN    
Sbjct: 358 EARRAVQQGGVAVDGEKVSDIAASFGKEELSGEG-IILKKGKKNFRRV 404


>gi|319900644|ref|YP_004160372.1| tyrosyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415675|gb|ADV42786.1| tyrosyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 430

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +  N+E +K   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEEILHHNMEGMKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CRLQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCRLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTALSKEEIEALISEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S++ +S
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASGILFGNATSEALRKLDEDTLLAVFEGVPQFEVSREALS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V+ A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFVEDAAVFASKGEMRKLVQGGGVSLNKEKLEAFDRVITSADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|153855375|ref|ZP_01996524.1| hypothetical protein DORLON_02538 [Dorea longicatena DSM 13814]
 gi|149752195|gb|EDM62126.1| hypothetical protein DORLON_02538 [Dorea longicatena DSM 13814]
          Length = 407

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 175/410 (42%), Positives = 252/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYEELVARGLIAQVTDEDRIKDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI++LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF EL
Sbjct: 121 NADWLMGLNYIEVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+KA  AA   F        MP   +++++++ G + +LT++VK+G   S +
Sbjct: 299 KLVHGEEEAQKAQEAARALFSTGAA-ADMPKTELTEEDLTDGNIDILTMLVKSGLTASKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + ++   +++       +     G + L  GKKN     +
Sbjct: 358 EARRAVQQGGVSVDGEKVTDVFQTFAGEALSGEG-VVLKKGKKNFRKVLV 406


>gi|332799995|ref|YP_004461494.1| Tyrosyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697730|gb|AEE92187.1| Tyrosyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 409

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 182/412 (44%), Positives = 256/412 (62%), Gaps = 4/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   IL ERGFI Q ++  E+  L  +  V  Y+G+D TA SLH GHL  +M +  +Q
Sbjct: 1   MDNVYDILKERGFIEQATHEEEIRELLEKEKVVFYVGFDPTADSLHVGHLLPMMAMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GGGT++IGDPS R + R+M+  ++I  N  + K  F   + +      A 
Sbjct: 61  RAGHVPIALLGGGTAMIGDPSGRTDMRKMLTREQIDYNARQFKKQFEKLLDF--SDNKAY 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + YID LRE+G  FSVNRML+ E  + RL  E  L+FLEFNYM++Q+YDF
Sbjct: 119 MLNNADWLMQLNYIDFLREVGRHFSVNRMLTAECYKQRL--EAGLTFLEFNYMLMQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + Y C+LQMGG+DQW NII G DL  R++    + +T  LLTT+ G KMGKT +GA
Sbjct: 177 LHLYRKYGCKLQMGGNDQWSNIISGADLIRRVEGDSAYGMTFTLLTTSEGIKMGKTQAGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E  SPY+F+QYWRNIDD DV      LT LPM EI R++ L+G +IN+AK+++A 
Sbjct: 237 LWLDPEKVSPYDFYQYWRNIDDRDVEKCLSLLTFLPMDEIKRLSSLEGAQINKAKEVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T M+H  EEA+KA  AA   F        +P   I   ++S GM LL L++  G  +S
Sbjct: 297 ELTKMIHSEEEAKKAQEAARALFKDGADMSSVPQTEIDAQKLSDGMELLELLMLTGLTSS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR ++   I + +  I + +L+I  +DFD    + L  GKK + +  L
Sbjct: 357 KSEGRRLIQQGGIYVADKRIDDVELKITAEDFDDDKTLLLRKGKKVYHMVKL 408


>gi|325299419|ref|YP_004259336.1| Tyrosyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318972|gb|ADY36863.1| Tyrosyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 430

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMVHNMMPGTE--ELLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ + +     A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A GTK GKT SG
Sbjct: 180 FLHLYETRGCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLVTKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL+   TSPY F+Q+W N+ D D   + K  T+L   EID       +   +   +K 
Sbjct: 240 NVWLDARYTSPYKFYQFWLNVSDEDAERYIKIFTSLTKEEIDALIAEHKEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   ++K E+ 
Sbjct: 300 LAREVTVMVHSEEDYNAAVEASGILFGNATSDALKRLDEDTLLSVFEGVPQFEVAKSEIE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V+ A    S  E R+  +   + +N   ++     I   D      + +  
Sbjct: 360 AGIKAVDLFVEKAAIFPSKGEMRKMTQGGGVSLNKEKLTAFDQVITADDLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|311031298|ref|ZP_07709388.1| tyrosyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 419

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 155/419 (36%), Positives = 226/419 (53%), Gaps = 12/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG ++Q+++   L  L S+  V  Y G+D T  SLH GHL  ++ L   Q+ 
Sbjct: 2   SLLEDLQFRGLVNQVTDEEGLTKLLSEEKVKLYSGFDPTGDSLHIGHLLPILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPS +   R +  S  + E   +IKG  S F+ +   +  A++ 
Sbjct: 62  GHHPIALVGGATGLIGDPSGKKAERTLNTSDIVVEWSNRIKGQLSQFLDFTAAENPAVIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  F +N ML+ +SV+SR+  E  +S+ EF+YMILQ+ DF+ 
Sbjct: 122 NNHDWIGEMNVISFLRDVGKNFGLNYMLAKDSVQSRI--ESGISYTEFSYMILQSLDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +  +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAI
Sbjct: 180 LYRGQNCKLQIGGSDQWGNITAGMELIRKSEENAKAFGLTIPLVTKADGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL++E TSPY F+Q+W N DD DVV + K  T L  SEI  + K   +  E   A K +A
Sbjct: 240 WLDREKTSPYEFYQFWINTDDRDVVKYLKFFTFLSHSEILELEKELQEAPEKRSAHKRLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLI 356
            E+T +VHG    E+A   +   F  SI       I     +V          + L+ L+
Sbjct: 300 EEVTKLVHGEAALEQAIRISKALFSGSISELSADEIKQGFADVPSFTVENEEQLALVELL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V +  A S  +AR  + + AI IN   + +    +   D        +  GKK + +  
Sbjct: 360 VASKIAPSKRQAREDITNGAISINGEKVQDLAYVLGESDRIEGQFTVVRRGKKKYFLIK 418


>gi|97197361|sp|Q5LXV1|SYY1_STRT1 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|97197368|sp|Q5M2F3|SYY1_STRT2 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|312279184|gb|ADQ63841.1| Tyrosyl-tRNA synthetase 1 [Streptococcus thermophilus ND03]
          Length = 418

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 226/420 (53%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NAKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+       Q +    A+K++A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A             A+   D+ +    +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + +  
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVLT 417


>gi|329956463|ref|ZP_08297060.1| tyrosine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524360|gb|EGF51430.1| tyrosine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 430

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLTKEEIEALTAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|299143869|ref|ZP_07036949.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518354|gb|EFI42093.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 408

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/413 (41%), Positives = 255/413 (61%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   IL ERGFI Q + P EL  L S+  V  YIG+D TA SL  GH  Q+ ++  +Q
Sbjct: 1   MKNVYDILEERGFIDQATYPEELKELLSKESVPFYIGFDATADSLTLGHFLQVRVMQHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKPI+L+GGGT++IGDPS + + R++M  + I+ N  + K   S F+ +      A+
Sbjct: 61  LAGHKPIALLGGGTTMIGDPSGKTDMRKIMTKETIEYNAGRFKEQLSHFLDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  WL ++ ++D +REIG  FSVNRML+F+  ++R+  E+ L+F EF YM++Q+YDF
Sbjct: 119 FVNNADWLLNLNFLDFMREIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFAYMLMQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + Y C+L++GGSDQW N++ G +L  +L+  K++++T  LLTTA+G KMGKT  GA
Sbjct: 177 LVLYRKYGCKLELGGSDQWSNMLGGYELVRKLEDDKVYSMTFKLLTTAAGIKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   TSPY  +QY RN DD DV+ F K LT LPM EI +   L+G E+N AK+++A 
Sbjct: 237 VWLDASKTSPYEMYQYMRNSDDRDVIKFMKLLTMLPMEEIAKYESLEGAELNTAKEVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI   VHG EEA+KA  AA   F   I+S+++P+  IS  E   G  ++ L+ +     S
Sbjct: 297 EIVKDVHGEEEAKKAMDAAKSLFSGGINSENIPSTEISSSEFENGKNIVELLKELNLIKS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +E RR ++ N I I++  +      + L DF     I +  GKK +    L 
Sbjct: 357 NSEGRRLIEQNGITIDDEKVKTFDQMLSLSDFKDGK-ILIRKGKKVYHQVKLI 408


>gi|291549525|emb|CBL25787.1| tyrosyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 407

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 179/408 (43%), Positives = 251/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYEELQARGLIAQVTDEERIKELVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF EL
Sbjct: 121 NADWLLDLNYIDVLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +NY C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQNYGCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDADVLKCIRMLTFLPLEEIDKMDTWEGAQLNTAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+KA  +A   F    ++ +MPT  + + +   G + +L ++VK+G A+S +
Sbjct: 299 KLVHGEEEAKKAQESARALFSQG-NADNMPTTELEEADFQDGKIDILAVLVKSGQASSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +ARR +    + ++   +++        DFD  G I    GKKN    
Sbjct: 358 DARRAVTQGGVSVDGEKVTDITTTYAPADFDGEGKIV-KKGKKNFRRI 404


>gi|55821842|ref|YP_140284.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55823758|ref|YP_142199.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55737827|gb|AAV61469.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55739743|gb|AAV63384.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 438

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 226/420 (53%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 23  IFEELKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 83  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 142

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 143 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 200

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 201 NAKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 260

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+       Q +    A+K++A E
Sbjct: 261 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 320

Query: 306 ITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A             A+   D+ +    +PT  IS DE    + ++ L
Sbjct: 321 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 377

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + +  
Sbjct: 378 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVLT 437


>gi|24380335|ref|NP_722290.1| tyrosyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|24378352|gb|AAN59596.1|AE015022_3 putative tyrosyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 422

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 144/427 (33%), Positives = 224/427 (52%), Gaps = 18/427 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +     L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++
Sbjct: 1   MENSMT-IFEELKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVM 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GHKP +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G 
Sbjct: 60  RHLQLAGHKPYALVGGATGLIGDPSFKDDERSLQTKETVKNWVQSIRSQLERFIDFKHGD 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W+  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q
Sbjct: 120 NKAQMVNNYDWMGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L + +   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+
Sbjct: 178 GYDFYVLNQEHAVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKS 237

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
              A+WL+ + TSPY  +Q+W N+ DAD + F K  T L + EI+  R+          A
Sbjct: 238 EGNAVWLDADKTSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLA 297

Query: 299 KKIIATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSR 348
           +KI+A E+ T VHG+   ++A             ++   ++     ++P  ++     + 
Sbjct: 298 QKILAKEVVTFVHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKS---ND 354

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V AG   S  +AR  L++ AI IN   I +    +  QD        +  GK
Sbjct: 355 NHNIVELLVTAGIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGK 414

Query: 409 KNHIICH 415
           K + +  
Sbjct: 415 KKYFVLT 421


>gi|254562151|ref|YP_003069246.1| tyrosine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269429|emb|CAX25395.1| tyrosine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 423

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 217/413 (52%), Positives = 296/413 (71%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L WLQ
Sbjct: 9   KSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHWLQ 68

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     A+
Sbjct: 69  KTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNGAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+YDF
Sbjct: 129 MVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +GA
Sbjct: 189 VELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAAGA 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++AT
Sbjct: 249 VWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVLAT 308

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAGFA 362
           E T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A   
Sbjct: 309 EATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAKLV 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 369 PSTSEARRQIKGGGLRVNDVQVSDEKAVLRTEDLTAEGVIKLSFGRKKHVLLR 421


>gi|166033543|ref|ZP_02236372.1| hypothetical protein DORFOR_03269 [Dorea formicigenerans ATCC
           27755]
 gi|166026728|gb|EDR45485.1| hypothetical protein DORFOR_03269 [Dorea formicigenerans ATCC
           27755]
          Length = 407

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 182/410 (44%), Positives = 251/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYEELQARGLIAQVTDEERIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKKQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF EL
Sbjct: 121 NADWLLGLNYIEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID M K +G E+N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVGDADVLKCIRMLTFLPLEEIDAMDKWEGAELNKAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
           ++VHG EEA+KA  AA   F        MP   +++ +++ G + ++TL+VK G   S +
Sbjct: 299 SLVHGEEEAKKAQEAAKALFSTGAA-ADMPKTELTEADLTDGNIDIMTLLVKCGLTASKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + ++   I++       +DF   G I L  GKKN     +
Sbjct: 358 EARRAVQQGGVSVDGEKITDIAHTFAGEDFGGEG-IVLKKGKKNFRKVIV 406


>gi|329848845|ref|ZP_08263873.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328843908|gb|EGF93477.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 433

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 194/413 (46%), Positives = 274/413 (66%), Gaps = 10/413 (2%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            F +  L+ L+ RGFIHQ +    +      G+V  Y G+D TA SLH GHL  +MLL  
Sbjct: 28  TFMNALLTTLTRRGFIHQCTQTDGVTDAFRSGIVPVYAGFDATADSLHVGHLLPIMLLRR 87

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI L+GGGT+ IGDPSFR +SR M+   +I  NI  I+G+F  F+ +G G TD
Sbjct: 88  LQRAGHKPIVLIGGGTTRIGDPSFRSDSRPMLTDAQIATNIAGIRGVFERFLAFGDGATD 147

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  WL  + YID+LR++G  FSVNRMLSF+SV+SRL+R++SLSFLEFNYMILQAY
Sbjct: 148 AILVNNADWLDRLGYIDMLRDVGPHFSVNRMLSFDSVKSRLERQESLSFLEFNYMILQAY 207

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y CRLQ+GG+DQWGNI+ GIDL  R+   ++F LT+PLLTTASG KMGKT +
Sbjct: 208 DFLELNRRYGCRLQIGGADQWGNIVSGIDLVRRMAGEEVFGLTAPLLTTASGAKMGKTAA 267

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +  SPY++WQ+WRN +D DV  F +  T L  ++I  +  L+G +IN AK ++
Sbjct: 268 GAVWLNGDRLSPYDYWQFWRNSEDRDVGRFLRLFTDLDEADIVHLESLEGADINAAKTVL 327

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T + HG +   +AA AA   F        +P I +S       + ++ L+V+AG  
Sbjct: 328 ADEATRLAHGEDARMRAAEAAAGAFGDGESLNGLPVIEVSGS-----VTVVDLLVQAGLV 382

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +S +EARR + +   ++++ ++ +E   I + D      +KLS G+K H++  
Sbjct: 383 SSKSEARRLIANRGARLDDEVVEDEGAVITVND-----PLKLSAGRKKHVLIR 430


>gi|323140411|ref|ZP_08075340.1| tyrosine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322415096|gb|EFY05886.1| tyrosine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 407

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/411 (38%), Positives = 252/411 (61%), Gaps = 7/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
               +L ERGFI Q+S+  E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ 
Sbjct: 2   SVYDVLMERGFIKQMSHEDEIKELLEKEKITFYIGFDPTADSLHVGHFIALMMMSHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT ++GDPS +DE R+M+  + I  NI   K   S FI +G     A+++
Sbjct: 62  GHRPIVLLGGGTGMVGDPSGKDEMRKMLTPEFIAHNIACFKKQMSRFIDFGED--KAIIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+ LLRE+G  F+VNRML+ E  + R   E+ L+F EFNYMI+Q YDF +
Sbjct: 120 NNADWLLDLNYVQLLREVGVHFTVNRMLAAECFKKRW--EKGLTFFEFNYMIMQGYDFWK 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +++C +++GG DQW N++ G++L  R      + +T  LLTT+ G KMGKT  GA+W
Sbjct: 178 LHHDHNCIMELGGDDQWSNMLAGVELIRRKDQKPAYCMTCKLLTTSDGRKMGKTEKGALW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRN+ D+DV +    LT LPM E+ R++ L+   INEAKK++A E+
Sbjct: 238 LDPEKTSPYDFYQYWRNVADSDVENCLSLLTFLPMDEVRRLSALKDAAINEAKKVLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           T +VHG E A +A  A    F  +     ++P I I+ ++++    ++ ++  A   +S 
Sbjct: 298 TKLVHGEEAARQAQEATEALFGGNAKDMSNVPAIEITSEDMTA--KIIDVLTAAKVFSSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EAR+ +    + + ++++ + +  +    FD+  ++ +  GKK +    +
Sbjct: 356 REARQLIAQGGLTVADTVLQDAEACLSADMFDADKSLLIRKGKKKYFRLLV 406


>gi|253564535|ref|ZP_04841992.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251948311|gb|EES88593.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301161140|emb|CBW20678.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis 638R]
          Length = 430

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTE--ELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLVAEHNEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|29348639|ref|NP_812142.1| tyrosyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569018|ref|ZP_04846428.1| tyrosyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298387008|ref|ZP_06996562.1| tyrosine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|81443579|sp|Q8A2S5|SYY_BACTN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29340544|gb|AAO78336.1| tyrosyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841037|gb|EES69118.1| tyrosyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298260158|gb|EFI03028.1| tyrosine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 430

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  VTAY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLNKEQVTAYLGIDPTADSLHIGHLCGVMILRHLQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFSFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+       Q   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALVAEHQQAPHLRALQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSESLRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLEAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|255010298|ref|ZP_05282424.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313148097|ref|ZP_07810290.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313136864|gb|EFR54224.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 430

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTE--ELLAKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ ESV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFSFLDFVREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T+L  +EID       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSLDKAEIDGLVAEHNEAPHLRALQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALRKLDEDTLLAVFEGVPQFEISRDALT 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|304317642|ref|YP_003852787.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779144|gb|ADL69703.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 405

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 257/410 (62%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
               +L ER FI Q+++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q+ 
Sbjct: 2   SVFDVLKERNFIQQMTHEDEIKGLLEKEKVTFYIGFDPTADSLHVGHFLQLMVMAHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT+++GDP+ + + R+M+  +EI  N E  K   S FI +  G   A++ 
Sbjct: 62  GHRPIVLIGGGTAMVGDPTGKTDMRKMLTKEEISHNAEAFKKQMSRFIDFSDG--KAILA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ Y++ LR+IG  FSVN+ML+ E  ++RL  E+ LSFLEFNYM++QAYDF+ 
Sbjct: 120 NNADWLLNLNYVEFLRDIGVHFSVNKMLTAECFKTRL--ERGLSFLEFNYMLMQAYDFLM 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y C L+MGG DQW NI+ G+DL  R +  + + +T  LLTT+ G KMGKT  GAIW
Sbjct: 178 LNKEYGCVLEMGGDDQWSNILAGVDLVRRKEGKQAYGMTFTLLTTSEGKKMGKTEKGAIW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E T PY+F+QYWRNIDD+DV      LT LPM E+ R+  L+ KEINEAKK++A E+
Sbjct: 238 LDAEKTPPYDFYQYWRNIDDSDVEKCLSLLTFLPMDEVRRLGSLKDKEINEAKKVLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG +EA KA  AA   F+ S    ++PT  I+ D +  G  LL ++ K     S +
Sbjct: 298 TKLVHGEDEARKAQKAAEALFEGSGDLSNVPTSIITHDML--GSSLLDVLTKTNIIPSKS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR +    + +N+  + +    +  +D    G + +  GKK++    +
Sbjct: 356 EGRRLITQGGLYVNDENVKDINAVVT-EDMFKQGYMLVRKGKKSYNKIVI 404


>gi|260172698|ref|ZP_05759110.1| tyrosyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920991|ref|ZP_07917231.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694866|gb|EFS31701.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 430

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQEAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDEVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|319940289|ref|ZP_08014641.1| tyrosyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810591|gb|EFW06927.1| tyrosyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 418

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 3   IFDELKERGLVFQTTDEEALRKALAEGNVSFYSGYDPTADSLHLGHLVPILVMKHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  +  I+   S F+ +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDTERSLQTKDTVEGWVRSIQAQVSRFLDFENGDNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NRRYGVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N + TSPY  +Q+W N+ DAD V F K  T LP+ EI+ + K          A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDADAVRFLKIFTLLPLDEIEEIGKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS--RGMGLLTLIVK 358
           + T+VHG +  ++A     + F  +I +  +  +      +   +V     + ++ L+V 
Sbjct: 301 VVTLVHGEKAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADDNLNIVELLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A    S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 ASVVNSKRQAREDVQNGAIYVNGDRIQDLDYTLTDADKLENELTVIRRGKKKYFVLT 417


>gi|152977028|ref|YP_001376545.1| tyrosyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025780|gb|ABS23550.1| tyrosyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 418

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 158/418 (37%), Positives = 231/418 (55%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   NILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPILMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A+M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKKQLSNFLEFENVENPAVMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L KN+ CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GA+
Sbjct: 180 LYKNHGCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +A
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILDLEKQVAEAPEKRVAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I     +V          GL+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTADEIEQGFKDVPSVDRSAEDTGLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI IN          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYINGERTQELDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|160938370|ref|ZP_02085725.1| hypothetical protein CLOBOL_03268 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438743|gb|EDP16500.1| hypothetical protein CLOBOL_03268 [Clostridium bolteae ATCC
           BAA-613]
          Length = 408

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/410 (42%), Positives = 252/410 (61%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R MM  + IQ N +  K   S FI +  G   A+M+N
Sbjct: 63  NKPIALIGGGTGMIGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NAEWLMGLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FKRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+ D+DV+   + LT LP+ +ID M + +G  +N+AK+I+A E+T
Sbjct: 239 DPEKTSPFDFYQYWRNVGDSDVLKCLRMLTFLPLEQIDEMDQWEGSRLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA   A   F     +++MPT  +S+++ + G + +L+++ K+G A S +
Sbjct: 299 KLVHGEEEAAKAQEGARALFAAGASTENMPTFELSEEDFTDGTIDILSILNKSGLAASRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   + ++ + + + K     + F   G + +  GKKN     L
Sbjct: 359 EARRNVEQGGVSVDGNPVKDIKAVFSREQFAGDG-VVVKRGKKNFKKIIL 407


>gi|306820971|ref|ZP_07454591.1| tyrosine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551085|gb|EFM39056.1| tyrosine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 407

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 186/412 (45%), Positives = 254/412 (61%), Gaps = 5/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+   +L ERGFI Q S+  EL  L     VT Y GYD TA SLH GH  Q + +  +Q
Sbjct: 1   MSNVFDVLKERGFIAQTSHEEELRELFENERVTFYTGYDATADSLHVGHFLQAIAMRHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI L+GGGT++IGDPS R + R+M+  ++I+ N E+ K   S FI +      A+
Sbjct: 61  LAGHRPIVLIGGGTTMIGDPSGRTDMRQMLTPEDIKNNGERFKEQLSRFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + +N  WL +++YI  LREIG+ FSVNRML+ E  +SR+  E+ LSFLEFNYMI+QAYDF
Sbjct: 119 LEDNAHWLMNLEYIPFLREIGAEFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YDC++Q GG DQW NI+ G DL  R    K FALT  LLTT+ G KMGKT+SGA
Sbjct: 177 YMLNKMYDCKVQCGGDDQWSNILAGADLVRRKSQKKAFALTFNLLTTSDGKKMGKTMSGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+KE TSPY F+QYWRNI+DA V      LT LPM E+ R+  L+   INEAK+++A 
Sbjct: 237 LWLDKEKTSPYEFFQYWRNIEDASVEKCLGLLTFLPMDEVRRLGALKDSAINEAKEVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T +VHG+EEA+KA  AA   F  +  S + PT  ++K ++ +G+ +L L+     + S
Sbjct: 297 ETTKLVHGKEEADKALEAARAIFSSNASSANAPTTIVNKADLDKGINILELLKLTNLSPS 356

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   I +N+  I++    +          I +  GKK      +
Sbjct: 357 NAEGRRLIQQGGITVNDEKITDTNFMVDTS-MMKDDVIMIRKGKKVFHQVKI 407


>gi|170756799|ref|YP_001782947.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|254783587|sp|B1IFG0|SYY_CLOBK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169122011|gb|ACA45847.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 407

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 176/413 (42%), Positives = 262/413 (63%), Gaps = 8/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MSNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +      A+
Sbjct: 61  KAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSED--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 MVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA
Sbjct: 177 LELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           E+T ++HG EEA+KA  AA   F  +     +MPT  I K++++  +  L    K     
Sbjct: 297 EVTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYIDKNDLNNLLVDLLA--KCEIFP 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR +K   + +N+  +++  L +  +     G I +  GKKN     +
Sbjct: 355 SKSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKNFNRIVV 406


>gi|209542797|ref|YP_002275026.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530474|gb|ACI50411.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 413

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 203/415 (48%), Positives = 271/415 (65%), Gaps = 4/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD     G    YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLQEAEARGFIFQCTDIDALDAALQAGPAAGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH+P++LMGGGT+ IGDPSFR+E+R++M  + I  N+  I+G    F+++  G 
Sbjct: 59  RLMQKHGHRPVALMGGGTAKIGDPSFREEARQLMTDETIAANLRGIEGCLRQFLQFD-GA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A + NN  WL  + YIDLLR++G  FSVNRML+F+SVRSRL+REQ L+FLEFNY ILQ
Sbjct: 118 AGARLANNADWLDRLSYIDLLRDVGVHFSVNRMLAFDSVRSRLEREQGLTFLEFNYSILQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF EL++     LQMGGSDQWGNI+ GIDL  R    ++F LT+PLLTTASG KMGK+
Sbjct: 178 SYDFRELSRTQGVTLQMGGSDQWGNIVSGIDLVRRTDQKQVFGLTTPLLTTASGAKMGKS 237

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWL+      + +WQ+WRN+DDADV  F +  T LP++E DR+A L G EINEAKK
Sbjct: 238 ARGAIWLSASRLPIFEYWQFWRNVDDADVGRFLRLFTDLPIAECDRLAALGGTEINEAKK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T + HGR EA+ AA AA   F+       +P  +I+ D ++ G+    L V++G
Sbjct: 298 VLATEATALCHGRAEADAAAEAARRTFEDGAAPAALPGTTIAADLLAAGIPAFRLFVESG 357

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR ++    +IN+  + +E   I   D      IKLS G+K+HI+  
Sbjct: 358 MAASNGEARRLIRGGGARINDVAVQDEGQVITTTDLADGA-IKLSSGRKHHILVR 411


>gi|226322907|ref|ZP_03798425.1| hypothetical protein COPCOM_00679 [Coprococcus comes ATCC 27758]
 gi|225208693|gb|EEG91047.1| hypothetical protein COPCOM_00679 [Coprococcus comes ATCC 27758]
          Length = 407

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 177/408 (43%), Positives = 250/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYEELKARGLIAQVTDEPLIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+++LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYVEVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNLQFGGDDQWSNMLGGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N AK+I+A E+T
Sbjct: 239 DPEKTSPFEFYQYWRNVADADVLKCLRMLTFLPLEQIDEMDKWEGAQLNTAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA   A   F    ++  MPT  +S ++ + G + +LTL+ K+G   S +
Sbjct: 299 KLVHGEEEATKAQEGARALFSSG-NAADMPTAELSDEDFADGSVDILTLLHKSGLVASKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR ++   + ++   +S+        DF+  G   +  GKKN    
Sbjct: 358 EARRAVQQGGVAVDGEKVSDIATTFAKADFEGEGK-VVRKGKKNFRKV 404


>gi|60679675|ref|YP_209819.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis NCTC 9343]
 gi|81317251|sp|Q5LJ19|SYY_BACFN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|60491109|emb|CAH05857.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis NCTC 9343]
          Length = 430

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTE--ELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLIAEHNEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|227536143|ref|ZP_03966192.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227244040|gb|EEI94055.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 427

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/425 (34%), Positives = 226/425 (53%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  V+ YIG+D T  SLH GHLTQ+M L   Q  
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLNKEKVSGYIGFDPTGDSLHVGHLTQIMTLIHFQNA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R ++  + +  N+  +K   S F+ +G G+ DA M+
Sbjct: 60  GHKPVALVGGATGMIGDPSFKSAERNLLDEETLNHNVASLKHQLSKFLTFGEGELDAKMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W    K++D +R+IG   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFKFLDFIRDIGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K+++C++QMGGSDQWGNI+ G +   R      FALT+ L+  + G K GKT SGA+W
Sbjct: 180 LWKHHNCKIQMGGSDQWGNIVTGTEFIRRQDQGTAFALTTQLIKKSDGQKFGKTESGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + T+PY ++Q+W N  D D  ++ +  T  P  EID +             +K +A 
Sbjct: 240 LDAKKTTPYKYYQFWLNATDDDAKNWIRIFTLKPKEEIDAIIAEHDAAPHTRTVQKALAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVSRGM 350
           +IT   H  ++ E A   +   F                      +P  +ISK E++ G+
Sbjct: 300 DITIRTHSEKDYETALKTSEFLFGNGSLDFLGDLEHEAVLDVFDGVPQFTISKSELAEGI 359

Query: 351 GLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +L L+  K     S  EAR+  +   + +N   +S        ++  +   I    GKK
Sbjct: 360 NILDLLATKTQIFPSKGEARKMTEGGGVSVNKEKVSGTDATFTTENLINNKYIIAQRGKK 419

Query: 410 NHIIC 414
           N+ + 
Sbjct: 420 NYYLI 424


>gi|157803618|ref|YP_001492167.1| tyrosyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|189029763|sp|A8EYE9|SYY_RICCK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157784881|gb|ABV73382.1| tyrosyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 411

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 278/409 (67%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ +N   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIKEFRNKGYFHQCTNLDRLTSITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE+R+++  +EI +N E IK   S FIK+G   +DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEARKILSKEEIAKNAEGIKKSLSKFIKFGEESSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NSEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K Y+C LQ+GGSDQWGNI+ G+DL  ++ + ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKYYNCSLQLGGSDQWGNIVIGVDLIRKISSKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L   E  +   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLFSELNTKEFTKFENLVAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++ T+ +  + +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEQGEIDENLHTVVLELEILQAGINAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ +I +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKINDKLIEDENMIINTNFLLDKSVIKLSAGKKRHILVRI 411


>gi|332358495|gb|EGJ36319.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 419

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 225/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFDKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVQELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVLT 418


>gi|125717052|ref|YP_001034185.1| tyrosyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125496969|gb|ABN43635.1| Tyrosyl-tRNA synthetase 1, putative [Streptococcus sanguinis SK36]
 gi|325697737|gb|EGD39621.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327459248|gb|EGF05596.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 419

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 226/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +V   + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQVEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSDSDKLEDELTVIRRGKKKYFVLT 418


>gi|228478125|ref|ZP_04062736.1| tyrosyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250305|gb|EEK09558.1| tyrosyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 418

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 226/420 (53%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+       Q +    A+K++A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A             A+   D+ +    +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + +  
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDADKIDNEITVIRRGKKKNFVLT 417


>gi|255693353|ref|ZP_05417028.1| tyrosine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260620930|gb|EEX43801.1| tyrosine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 430

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R++G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARKVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+       +   +   +K 
Sbjct: 240 NIWLDSRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHREAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITAADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|159044694|ref|YP_001533488.1| tyrosyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189083648|sp|A8LQM0|SYY_DINSH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157912454|gb|ABV93887.1| tyrosyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 417

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 216/411 (52%), Positives = 290/411 (70%), Gaps = 2/411 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   S+GVV  YIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGFLADCTDYQGLDEAMSKGVVPTYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++ +++I  NI  +K +FSS++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGAEQIDANIAGMKQVFSSYLTYGDGPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR++G  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDVGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 MELNRRYGCRLQMGGSDQWGNIVNGIDLTRRILDQEVYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN+AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECDRLGALAGSEINDAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +T ++HG E A+ A   A E F+     + +PT++++ DE+  G+ ++ LI ++G A S
Sbjct: 306 AVTALLHGPEAAQAAEATAREVFEKGGAGEDLPTLTLTTDEIGDGISVVQLITRSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             EA+R +  N  K++++ +++  L I      +   IKLS G+K H +  
Sbjct: 366 GKEAKRLIAENGAKLDDAPLTDAGLMIDADRLAAP--IKLSAGRKRHALIK 414


>gi|218131651|ref|ZP_03460455.1| hypothetical protein BACEGG_03272 [Bacteroides eggerthii DSM 20697]
 gi|217985954|gb|EEC52293.1| hypothetical protein BACEGG_03272 [Bacteroides eggerthii DSM 20697]
          Length = 430

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKGFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALT 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +      +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLVAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|300772115|ref|ZP_07081985.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760418|gb|EFK57244.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 427

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/425 (34%), Positives = 225/425 (52%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  V+ YIG+D T  SLH GHLTQ+M L   Q  
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLNKEKVSGYIGFDPTGDSLHVGHLTQIMTLIHFQNA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R ++  + +  N+  +K   S F+ +G G+ DA M+
Sbjct: 60  GHKPVALVGGATGMIGDPSFKSAERNLLDEETLNHNVASLKHQLSKFLTFGEGELDAKMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W    K++D +R+IG   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFKFLDFIRDIGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K+++C++QMGGSDQWGNI+ G +   R      FALT+ L+  + G K GKT SGA+W
Sbjct: 180 LWKHHNCKIQMGGSDQWGNIVTGTEFIRRQDQGSAFALTTQLIKKSDGQKFGKTESGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + T+PY ++Q+W N  D D  ++ +  T  P  EI+ +             +K +A 
Sbjct: 240 LDAKKTTPYKYYQFWLNATDDDAKNWIRIFTLKPKEEIEAIIAEHDAAPHTRTVQKALAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVSRGM 350
           +IT   H  ++ E A   +   F                      +P   ISK E++ G+
Sbjct: 300 DITIRTHSEKDYETALKTSEFLFGNGSLDFLGDLEHNAVLDVFDGVPQFKISKSELAEGI 359

Query: 351 GLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +L L+  K     S  EAR+  +   + +N   +S        ++  +   I    GKK
Sbjct: 360 NILDLLATKTQIFPSKGEARKMTEGGGVSVNKEKVSGTDATFTTENLINNKYIIAQRGKK 419

Query: 410 NHIIC 414
           N+ + 
Sbjct: 420 NYYLI 424


>gi|160884937|ref|ZP_02065940.1| hypothetical protein BACOVA_02927 [Bacteroides ovatus ATCC 8483]
 gi|293368634|ref|ZP_06615241.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|156109972|gb|EDO11717.1| hypothetical protein BACOVA_02927 [Bacteroides ovatus ATCC 8483]
 gi|292636276|gb|EFF54761.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 430

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/428 (33%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQKAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|332358433|gb|EGJ36258.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 419

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 226/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +V   + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQVEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSDSDKLEDELTVIRRGKKKYFVLT 418


>gi|312865572|ref|ZP_07725798.1| tyrosine--tRNA ligase [Streptococcus downei F0415]
 gi|311098900|gb|EFQ57118.1| tyrosine--tRNA ligase [Streptococcus downei F0415]
          Length = 418

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++  +L      G V+ Y GYD TA SLH GHL  +++   LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEDLKKALEAGSVSFYSGYDPTADSLHLGHLVPILVCRHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP  L+GG T +IGDPSF+D  R +   + ++  ++KI+   S F+ +  G   A M N
Sbjct: 63  HKPYPLVGGATGLIGDPSFKDTERSLQTKETVEGWVKKIQKQLSRFLDFENGDNKAEMTN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F++N M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTINYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NRQHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           + + TSPY  +Q+W N+ D D V F K  T LP+ EI  + +     +    A+KI+A E
Sbjct: 241 DADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLPLDEIAEIEEKFNAARHERLAQKILAKE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD-------EVSRGMGLLTLIVK 358
           + T+VHG    ++A     + F  +I +     +            +    + ++ ++VK
Sbjct: 301 VVTLVHGEAAYKEALQITKQLFAGNIRALSAQELKQGLSGVPNYAVQAEDDLNIVEILVK 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G ++S  +AR  +++ AI IN   I +   Q+   D        +  GKK + +  
Sbjct: 361 SGISSSKRQAREDVQNGAIYINGERIQDLDYQLSDADKIDGELTVIRRGKKKYFVLT 417


>gi|322374092|ref|ZP_08048626.1| tyrosine--tRNA ligase [Streptococcus sp. C150]
 gi|321277058|gb|EFX54129.1| tyrosine--tRNA ligase [Streptococcus sp. C150]
          Length = 418

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 226/420 (53%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+       Q +    A+KI+A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKILARE 300

Query: 306 ITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A             A+   D+ +    +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALHGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A  + S  +AR  +++ AI IN   I +    +   D        +  GKK + +  
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERIQDLDYTLSDSDKIDNEITVIRRGKKKNFVLT 417


>gi|237716892|ref|ZP_04547373.1| tyrosyl-tRNA synthetase [Bacteroides sp. D1]
 gi|237720657|ref|ZP_04551138.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262405660|ref|ZP_06082210.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644399|ref|ZP_06722162.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294810392|ref|ZP_06769049.1| tyrosine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229442875|gb|EEO48666.1| tyrosyl-tRNA synthetase [Bacteroides sp. D1]
 gi|229450408|gb|EEO56199.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262356535|gb|EEZ05625.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640234|gb|EFF58489.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294442357|gb|EFG11167.1| tyrosine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 430

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/428 (33%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+       +   +   +K 
Sbjct: 240 NIWLDARYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQEAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|291543945|emb|CBL17054.1| tyrosyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 405

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/413 (42%), Positives = 259/413 (62%), Gaps = 12/413 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LFEELKRRGLLAQLTDEKEIKELINAGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT +IGDPS + + R+MM  + I+ N+E  K   S FI +  G   AL +N
Sbjct: 63  NKPIVLLGGGTGMIGDPSGKTDMRKMMTRETIEHNVECFKKQMSRFIDFSEG--KALAVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LR++G+ FSVN+ML+FE  + R+  E+ L+FLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVDVLRDVGACFSVNKMLTFECYKQRM--ERGLTFLEFNYMIMQSYDFYRL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  +      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 FQDYGCNMQFGGDDQWANMLGGTELIRKKLGKDAYAMTITLLLNSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEINEAKKIIATEI 306
           +   TSPY F+QYWRN++DADV+   K LT +P+ EI+ M   ++G + N+AK+++A E+
Sbjct: 239 DPAKTSPYEFYQYWRNVNDADVIKCLKMLTFVPVEEIEDMEQHMEGAQFNKAKELLAYEL 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATST 365
           T +VHG EEA KA TAA   F    +S  MPT ++S +++   G+G+LTL+VK G A S 
Sbjct: 299 TKLVHGEEEANKADTAAKAVFSGG-NSADMPTTTLSGEDIPEGGIGILTLLVKCGLAASN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            E RR ++   I +N++ I++ +  ++ +     G + +  GKK      + G
Sbjct: 358 GEGRRLVQQGGISVNDAKITDPQTMLQPE-----GELIIRKGKKVFHKVVMEG 405


>gi|312862486|ref|ZP_07722729.1| tyrosine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311102129|gb|EFQ60329.1| tyrosine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 418

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 226/420 (53%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+       Q +    A+K++A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A             A+   D+ +    +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + +  
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVLT 417


>gi|209964922|ref|YP_002297837.1| tyrosyl-tRNA synthetase TyrS [Rhodospirillum centenum SW]
 gi|209958388|gb|ACI99024.1| tyrosyl-tRNA synthetase TyrS [Rhodospirillum centenum SW]
          Length = 420

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 210/413 (50%), Positives = 279/413 (67%), Gaps = 2/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + KSDFL I+ ERG+ HQ ++   LD     G +  Y GYD TA SLH GHL   M+  W
Sbjct: 8   SVKSDFLRIMLERGYYHQATDLEALDKALLAGGLVGYNGYDATADSLHVGHLLPTMIQRW 67

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG +PI LMGGGT+ IGDPS RDE+R+++  + I  NI  I+ +F     +  G + 
Sbjct: 68  LQKTGGRPILLMGGGTTRIGDPSGRDETRQLLTDEVIAANIAGIRTVFDRL--FDFGPSG 125

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A ++NN  WL  ++YI  LR+IG  F++NRML+F+SVR RL REQ L+FLEFNYMILQAY
Sbjct: 126 ARLVNNAEWLDRLEYISFLRDIGRHFTINRMLTFDSVRLRLDREQPLTFLEFNYMILQAY 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL++ Y C LQ GGSDQWGNI+ G+DLG R+    LF LT PLLTTASG KMGKT +
Sbjct: 186 DFVELSRRYGCVLQTGGSDQWGNIVNGVDLGRRIANRDLFGLTCPLLTTASGAKMGKTAA 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN+E  S ++FWQYWRN +DADV  F K  T LP+ EI R+  LQG EINEAKKI+
Sbjct: 246 GAVWLNRERLSDWDFWQYWRNTEDADVGRFLKLFTELPLDEIARLEALQGAEINEAKKIL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE+T +V G E A+ AA  A   F+    ++ +PT+ +  DE++ G+ +  L+ KAG  
Sbjct: 306 ATEVTRLVRGDEAADAAAETARRTFEQGALAEGLPTVELPADELAAGVAVYGLLAKAGLV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S  EARR +K  A+++N+  +++E  ++   D  + G IKLS G+K H +  
Sbjct: 366 ASNGEARRQIKQAAVRVNDQPVTDEFAKVGSGDLTADGVIKLSVGRKRHALVK 418


>gi|53711359|ref|YP_097351.1| tyrosyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|265764804|ref|ZP_06093079.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81384005|sp|Q650K7|SYY_BACFR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52214224|dbj|BAD46817.1| tyrosyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|263254188|gb|EEZ25622.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 430

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTE--ELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLVAEHNEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D + 
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALV 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|253681500|ref|ZP_04862297.1| tyrosine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561212|gb|EES90664.1| tyrosine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 406

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/412 (41%), Positives = 255/412 (61%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MENVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMSHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT++IGDPS + + R+M+  ++I  ++  IK     FI +      A+
Sbjct: 61  KAGHRPIALVGGGTAMIGDPSGKTDMRKMLTKEQIDIHVAGIKKQLGRFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF
Sbjct: 119 LVNNADWLLGAKYVEFIREIGIHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA
Sbjct: 177 LELNRKYGCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A 
Sbjct: 237 LWLDAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSALEGAAINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA+KA  AA   F       ++PT+ ISK+++  G  LL +++      S
Sbjct: 297 EVTKLVHGEEEAQKAQAAAEALFSGGADMSNVPTVEISKEDI--GTALLEILLNGKVIPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   + +N+  +++    ++  D        +  GKK +    +
Sbjct: 355 KKEGRRLIEQGGLYMNDENVTDPNATLEESDLKDGS-ALIKKGKKKYYRIVV 405


>gi|97202191|sp|Q8DS44|SYY_STRMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 418

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 222/420 (52%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 3   IFEELKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVMRHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDDERSLQTKETVKNWVQSIRSQLERFIDFKHGDNKAQMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWMGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHAVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           + + TSPY  +Q+W N+ DAD + F K  T L + EI+  R+          A+KI+A E
Sbjct: 241 DADKTSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLAQKILAKE 300

Query: 306 ITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T VHG+   ++A             ++   ++     ++P  ++     +    ++ L
Sbjct: 301 VVTFVHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKS---NDNHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  L++ AI IN   I +    +  QD        +  GKK + +  
Sbjct: 358 LVTAGIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGKKKYFVLT 417


>gi|323353636|ref|ZP_08088169.1| tyrosine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121582|gb|EFX93345.1| tyrosine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|324992322|gb|EGC24244.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 419

 Score =  374 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 225/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YTLNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFESAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSDSDKLEDELTVIRRGKKKYFVLT 418


>gi|304413673|ref|ZP_07395117.1| tyrosyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283764|gb|EFL92158.1| tyrosyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 432

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 154/419 (36%), Positives = 224/419 (53%), Gaps = 9/419 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K D +  L ERG I QI++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q
Sbjct: 3   KIDLIKELEERGLIAQITDKEALTQRLAQGSLSLYCGFDPTADSLHLGHLVPLLCLKRFQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPSF+ E R++   + + + + KI+   S F+ +   K  A+
Sbjct: 63  LAGHTPIALVGGATGLIGDPSFKAEERKLNTLETVDQWVAKIRQQVSPFLDFKNDKNRAI 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYD 183
            +NN  W   +  +  LR+IG  FS+N+M+S E+V+ R  + E  LSF EF+Y +LQ YD
Sbjct: 123 TVNNYDWFAQMNVLTFLRDIGKHFSINQMISKEAVKQRLDRHESGLSFTEFSYNLLQGYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K ++  LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT +G
Sbjct: 183 FASLNKKHNVELQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEAG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ + TSPY F+Q+W N  DADV  F K  T + + +I   +       +   A+ +
Sbjct: 243 AVWLDAKKTSPYKFYQFWINTSDADVYRFLKLFTFMALEDIKALQEEDQLSGKPPRAQAV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T MVHG      A       F              +    +   ++     L   
Sbjct: 303 LAEEMTKMVHGETALAAAQRITQSLFSSHFSDMTQADFSQLAQDGMPTIDLFSDTDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V AG A S  +AR+ +  NA+K+N     N +      D        L  GKK++ + 
Sbjct: 363 LVNAGLAPSRGQARKLISENAVKVNGEKQGNAQYSFTDADRLFGKYTLLCRGKKHYSLV 421


>gi|114799842|ref|YP_761314.1| tyrosyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114740016|gb|ABI78141.1| tyrosyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 416

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 182/415 (43%), Positives = 269/415 (64%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KS+FL  LS RGFI   ++  ELD  CS G   AY+GYD TA SLH GHL  +M+L
Sbjct: 1   MSDYKSEFLRELSWRGFIKDTTHKAELDAYCSNGTPVAYVGYDATADSLHVGHLMTIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ G KPI+LMGGGT+ +GDP+ +++SR ++   +I  NI  IK  F  F+++G G 
Sbjct: 61  RIFQRHGGKPIALMGGGTTKVGDPTDKEKSRPLLTDDQINANIAGIKTAFEPFLRFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  + Y+++LR IG +F++N M+  ++VR RL+ EQ  +FLEFNY+++Q
Sbjct: 121 NDAIMVNNNDWLGELGYLEMLRAIGVYFTINTMVKQDTVRRRLEAEQPYTFLEFNYLLMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF+EL + + CR+Q+GGSDQWGNI+ G+DL  + +    F +T+ L+TT+SG KMGKT
Sbjct: 181 SYDFLELFRRHGCRMQLGGSDQWGNIVGGVDLVHKAEGGDAFGVTAHLVTTSSGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +  SPY +WQ+WRN +DADV  F +  T L   EI+R+  L+G  IN+AK 
Sbjct: 241 VGGAVWLNADRKSPYEYWQFWRNTEDADVGKFLRLFTDLGREEIERLEALEGSAINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG   A +A  AA   F     +  +PT  + + E+  GM +      AG
Sbjct: 301 ALANAATTLLHGAAAAAEAEAAAKAVFAGGASADALPTALVPQAELEAGMLVAAACAAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            + S  EARR ++  AI++N++++S+   ++ + D    G IKLS GKK H +  
Sbjct: 361 LSKSNGEARRLIEQGAIRVNDALVSDPNAKVSMADM-QDGAIKLSAGKKRHALVK 414


>gi|190571260|ref|YP_001975618.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|254765188|sp|B3CM50|SYY_WOLPP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|190357532|emb|CAQ54969.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 420

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 205/416 (49%), Positives = 287/416 (68%), Gaps = 2/416 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLF 61
             KS+FL+ + ERG+++Q +N   LD L SQ   + AYIG+D TA SLH G L Q+M+L 
Sbjct: 2   KHKSEFLNFIQERGYLYQCTNIDRLDQLLSQDNYIIAYIGFDCTAPSLHIGSLIQIMMLR 61

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK G+KPI L+GGGT+ IGDPS +D++R ++  ++I +NI  IK      I +  GKT
Sbjct: 62  HLQKFGYKPIVLLGGGTTKIGDPSGKDKARSVLPIEDINQNILGIKKTLEKMISFDYGKT 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A+++NN  WL +IKYID LR+IG+ FSVNRML F+SV+ RL REQ+LSFLEFNYM+LQA
Sbjct: 122 GAIIVNNADWLDNIKYIDFLRDIGTHFSVNRMLGFDSVKIRLDREQNLSFLEFNYMLLQA 181

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL K Y CR Q+GGSDQWGNI+ GI+L ++L  P+LF LT+PLL  A G KMGKT 
Sbjct: 182 YDFVELNKKYGCRFQIGGSDQWGNIVNGIELSKKLNLPELFGLTTPLLLNAQGKKMGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           SGA+WL+  M + Y++WQY+RN+DD DV  F +  T LP+ EI ++  L+ +E NEAKK+
Sbjct: 242 SGAVWLDGSMLNSYDYWQYFRNVDDQDVGRFLRLFTDLPIDEIKKLESLKDQETNEAKKV 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +ATE+T + HG +EAE A +AA+  F+ +  S  +   +I+K++++ G+ L+ L+   GF
Sbjct: 302 LATEVTKICHGCKEAELARSAAISAFE-NEDSSLLSGYTITKEQIANGIPLIDLLYDTGF 360

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             S   A+R ++ N  K+N++ I++    I  + F     IKLS GKK HI   + 
Sbjct: 361 EPSKGAAKRLIQGNGCKVNDNTINDVNYTINSESFKGQPFIKLSAGKKRHIKILVS 416


>gi|324990487|gb|EGC22425.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 419

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 225/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVLT 418


>gi|126725366|ref|ZP_01741208.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704570|gb|EBA03661.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 416

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 212/412 (51%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+ ++ +RGF+   ++ + LD    +GVV AYIG+D TASSLH G L Q+M+L WLQ
Sbjct: 6   KSEFMRVMMQRGFLADCTDYQALDDALLEGVVPAYIGFDATASSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI LMGGGT+ +GDPSFR + R ++  ++I ENI  I+ +F+S++++G   TDA 
Sbjct: 66  KTGHKPIVLMGGGTTKVGDPSFRADERPLLTPEKIDENIAGIRKVFTSYVQFGDEPTDAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 ILNNAEWLDGLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+L GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLDGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T + + E DR+  L G EIN AK ++A 
Sbjct: 246 VWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTEIDVEECDRLGALDGAEINAAKVVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT+ HG E A  A   A E F+       +PTIS++  ++  G+ ++ L VK+G + S
Sbjct: 306 AVTTLAHGAEAAAAAEATAREVFEKGGVGDDLPTISLTAADIGDGISIVQLFVKSGLSKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +A+R +  N  K+N++ I    + I + D      IKLS GKK H +  L
Sbjct: 366 GKDAKRLIAENGAKMNDADIDGAGVLITVADLVEP--IKLSAGKKRHALVTL 415


>gi|84515615|ref|ZP_01002977.1| tyrosyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510898|gb|EAQ07353.1| tyrosyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 416

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+S++ ERGF+   ++ + LD   S+GVVT YIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMSVMMERGFLADCTDYQGLDDALSRGVVTTYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++ + +I  NI  ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTADQIDANIAGMQQVFAKYLTYGDGPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNII GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIINGIDLTRRVLDHEIYGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DAD   F K  T LP+ E +R+  LQG +IN AK I+A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADTGRFLKLYTELPLDECNRLGALQGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A  A   A E F+       +PT+++   E+  GM +  +IV+AG A +
Sbjct: 306 EVTALLHGAEAATTAEATAREVFEKGGVGDDLPTLTLGAAELGDGMSIAQIIVRAGLAAT 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  ++N+  +++  L +          IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGARLNDEPLTDAGLMVDATMLAQP--IKLSAGKKRHALVQL 415


>gi|312868159|ref|ZP_07728363.1| tyrosine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096563|gb|EFQ54803.1| tyrosine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 418

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + +QE +  I+G  S F+ +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVQEWVRSIQGQLSRFLDFENGDNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELMRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N + TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +    + ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 AGVVNSKRQAREDVQNGAIYVNGERIQDLDYVLSDSDKLENELTVIRRGKKKYFVLT 417


>gi|325265205|ref|ZP_08131931.1| tyrosine--tRNA ligase [Clostridium sp. D5]
 gi|324029609|gb|EGB90898.1| tyrosine--tRNA ligase [Clostridium sp. D5]
          Length = 407

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 258/410 (62%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ + +  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYEELQARGLIAQVTDEKLISDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R++M ++ IQ N +  K   S+FI +  G   A+M+N
Sbjct: 63  NKPIALIGGGTGMIGDPSGRSDLRQVMTTETIQHNCDCFKKQMSNFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI++LRE+GS FSVNRML+ E  + R+  E+ L+F+EFNYMI+QAYDF  L
Sbjct: 121 NADWLLDLNYIEVLREVGSHFSVNRMLAAECYKQRM--EKGLTFMEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQWGN++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNLQFGGDDQWGNMLAGTELIRRKLGKDASAMTITLLLNSEGNKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRNI DADV+   + LT LP+ EI+ M + +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFDFYQYWRNIADADVLKCIRMLTFLPLEEINAMDEWEGSQLNKAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            M+HG+EEAEKA  +A   F    ++  MPT  ++ +++    + +LTL++K+G  TS +
Sbjct: 299 QMIHGKEEAEKAQESARTLFSQG-NAAEMPTAELTAEDLQENAVDILTLLLKSGLVTSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   I ++   +++         F   G + L  GKKN     L
Sbjct: 358 EARRAVEQGGIAVDGEKVTDIHEVFTADAFAGDG-LILKKGKKNFRKVVL 406


>gi|331268714|ref|YP_004395206.1| tyrosyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125264|gb|AEB75209.1| tyrosyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 406

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/412 (41%), Positives = 254/412 (61%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MENVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT++IGDPS + + R+M+  ++I  ++  IK     FI +      A+
Sbjct: 61  RAGHRPIALVGGGTAMIGDPSGKTDMRKMLTKEQIDVHVAGIKKQLGRFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF
Sbjct: 119 LVNNADWLLDAKYVEFIREIGIHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA
Sbjct: 177 LELNRKYGCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A 
Sbjct: 237 LWLDAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSALEGAAINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA KA  AA   F       ++PT+ ISKD +  G  LL +++      S
Sbjct: 297 EVTKLVHGEEEARKAQAAAEALFSGGADMSNVPTVEISKDAI--GTVLLEILLNGKVIPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   + +N+  +++  + ++  D        +  GKK +    +
Sbjct: 355 KKEGRRLIEQGGLYMNDENVTDPNVTLEESDLKDGS-ALIKKGKKKYYRIVV 405


>gi|328945418|gb|EGG39571.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 419

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 225/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YVLNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVLT 418


>gi|325478249|gb|EGC81368.1| tyrosine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 416

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/412 (39%), Positives = 249/412 (60%), Gaps = 7/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+  Q +N  EL  L     V  Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 11  NIFDELVDRGYYEQATNEEELKELLKNESVKFYCGFDATADSLTVGHLIQIMVMMRMQNY 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT++IGDPS R + R++M  + I  N E     F  F+ +  G   A ML
Sbjct: 71  GHRPVALLGGGTTLIGDPSGRSDMRQVMTEERIDHNAECFYKQFQRFLDFSDG--KASML 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL +++++  LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF++
Sbjct: 129 NNKDWLLNLEFVSFLRDVGSEFLVNEMIKKDAYKNRMAAG-GLTFFEFSYMLLQSYDFLK 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           + ++   +L+MGGSDQW NII G+DL ++ +  K + +T  LLTTA G KMGK+  GA+W
Sbjct: 188 MYRDDGVKLEMGGSDQWSNIIGGVDLIKKKENGKAYGMTFSLLTTADGVKMGKSQKGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATE 305
           L++E TSPY  +QY RN+DD DV  F  +LT LP +E  R  +    K+IN+AK+ +A E
Sbjct: 248 LDEEKTSPYEMFQYMRNVDDRDVEKFLLQLTFLPTAECRRLGSATDAKDINKAKETLAYE 307

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  +VHG+E+A++A  AA   F        MPT SI K+ + +G  LL L+ + G   S 
Sbjct: 308 VVKLVHGKEKADEALAAAKALFSGKGDESAMPTTSIEKENLPQG--LLALMTEVGLTKSN 365

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR +K   + IN+  I++   ++    F+    I +  GKKN     L 
Sbjct: 366 GEARRIIKQGGVSINDEKITDPSFEVTEDIFEDGR-IIIKKGKKNFHKVELA 416


>gi|322515916|ref|ZP_08068857.1| tyrosine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322125590|gb|EFX96920.1| tyrosine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 438

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 226/420 (53%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 23  IFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 83  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 142

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 143 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 200

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 201 NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 260

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+       Q +    A+K++A E
Sbjct: 261 DSTKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 320

Query: 306 ITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A             A+   D+ +    +PT  IS DE    + ++ L
Sbjct: 321 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 377

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + +  
Sbjct: 378 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVLT 437


>gi|189464681|ref|ZP_03013466.1| hypothetical protein BACINT_01025 [Bacteroides intestinalis DSM
           17393]
 gi|189436955|gb|EDV05940.1| hypothetical protein BACINT_01025 [Bacteroides intestinalis DSM
           17393]
          Length = 430

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N++ +K     F+ + +     A +
Sbjct: 60  GHKPMALIGGATGMIGDPSGKSAERNLLTEEILQRNMDGMKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIDALIVEHEAAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD V+
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEVSKDAVA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFTENAAIFASKGEMRKLVQGGGVSLNKEKLEAFDQVITSADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|229048365|ref|ZP_04193933.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH676]
 gi|228723090|gb|EEL74467.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH676]
          Length = 418

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 227/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N   I      +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERIQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|163815452|ref|ZP_02206825.1| hypothetical protein COPEUT_01615 [Coprococcus eutactus ATCC 27759]
 gi|158449089|gb|EDP26084.1| hypothetical protein COPEUT_01615 [Coprococcus eutactus ATCC 27759]
          Length = 406

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/408 (41%), Positives = 251/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQTTDEDEIRDLVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +      AL++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSKFIDFSED--KALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVDVLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDNWEGSQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F   +    MP+++++ D+   G + +++++VK+G  TS N
Sbjct: 299 KLVHGEEEAAKAQESARALFSKGVA-ADMPSVTLAADDFKDGSIDIVSVLVKSGLVTSRN 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E RR ++   + ++   I++ +  I  + FD  G + +  GKKN    
Sbjct: 358 EGRRAVEQGGVAVDGEKITDVQTTIPEEKFDGEG-VVVRRGKKNFRKV 404


>gi|325689600|gb|EGD31605.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 419

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 225/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDSLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVLT 418


>gi|317474726|ref|ZP_07934000.1| tyrosyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909407|gb|EFV31087.1| tyrosyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 430

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKGFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALT 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   I +N   +      +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGISLNKEKLVAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|153939380|ref|YP_001392669.1| tyrosyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|168179027|ref|ZP_02613691.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950749|ref|YP_002805840.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254783586|sp|C1FLY1|SYY_CLOBJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783588|sp|A7GIQ9|SYY_CLOBL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|152935276|gb|ABS40774.1| tyrosine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|182670125|gb|EDT82101.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226840771|gb|ACO83437.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|295320653|gb|ADG01031.1| tyrosine--tRNA ligase [Clostridium botulinum F str. 230613]
 gi|322807631|emb|CBZ05206.1| tyrosyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 407

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 177/413 (42%), Positives = 263/413 (63%), Gaps = 8/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MSNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +      A+
Sbjct: 61  KAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSED--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 MVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA
Sbjct: 177 LELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           E+T ++HG EEA+KA  AA   F  +     +MPT  I K++++  +  L   VK     
Sbjct: 297 EVTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYIDKNDLNNLLVDLL--VKCEIFP 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR +K   + +N+  +++  L +  +     G I +  GKKN     +
Sbjct: 355 SKSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKNFNRIVV 406


>gi|95929912|ref|ZP_01312653.1| tyrosyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95134208|gb|EAT15866.1| tyrosyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 430

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/429 (33%), Positives = 235/429 (54%), Gaps = 22/429 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG IH I    E      + + +AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 2   NFVQELTWRGMIHDIMPGTE--EQLQKEMTSAYVGIDPTADSLHIGHLVSVMMLKHFQLA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKPI+L+GG T +IGDPS +   R ++  + ++ N + IK   + F+ + +     A +
Sbjct: 60  GHKPIALVGGATGMIGDPSGKSAERNLLDEKTLRHNEDCIKKQLAKFLDFDSDAANAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ R   + +  LSF EF Y ++Q  D
Sbjct: 120 VNNYDWMKEFSFLEFIRDIGKHITVNYMMAKDSVKKRLSDESKVGLSFTEFTYQLVQGTD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQMGGSDQWGNI  G +L  R ++ + FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYREKNCKLQMGGSDQWGNITTGTELVRRKESGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL+ ++T+PY F+Q+W N+ DAD   + K  T L   E+      +         +K 
Sbjct: 240 NVWLDPKLTTPYKFYQFWLNVSDADAEKYIKIFTLLNKDEVAALVKEQEAAPHERPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  EE +KA  A+   F  +                 + +PT  ++++++ 
Sbjct: 300 LAREVTCMVHSEEEYDKAVEASQILFGKATTESLARLDKETFLSVFEGVPTFDVARNKID 359

Query: 348 RGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+  +     S  E RR +K N + +N + +++++  +   D  +   I +  
Sbjct: 360 NGVPVVELLAAETAAFPSKGELRRTIKGNGLSLNKAKVTDQEYLVTANDLINGSYILVQK 419

Query: 407 GKKNHIICH 415
           GKKN+ I  
Sbjct: 420 GKKNYYIIE 428


>gi|260587833|ref|ZP_05853746.1| tyrosine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260542098|gb|EEX22667.1| tyrosine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 406

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 177/410 (43%), Positives = 252/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEEEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K     FI +  G   A+M+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRSDMRSMMTPEIIQHNCDCFKKQMERFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGENACAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVADADVLKCIRMLTFLPLEQIDEMDKWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG+EEAEKA  AA   F    ++ +MP+  I + ++  G + L++L+ K+G A + +
Sbjct: 299 ALVHGKEEAEKAQEAARALFSSG-NAANMPSAKIEEADLVDGNIDLISLLHKSGLANTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + I+   +++ K  +  +     G I L  GKKN     L
Sbjct: 358 EARRAIEQGGVSIDGEKVTDIKHLVSGEKLQGDG-IVLKKGKKNFRKVTL 406


>gi|284048192|ref|YP_003398531.1| tyrosyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952413|gb|ADB47216.1| tyrosyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 408

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 175/408 (42%), Positives = 255/408 (62%), Gaps = 4/408 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L +L ERG++ Q+S+P E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ 
Sbjct: 2   NVLDVLEERGYLKQMSHPDEIRELLGKEKITFYIGFDPTADSLHVGHFIALMVMAHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT ++GDPS ++E R+M+  + I  NIE  K     FI    G   A++ 
Sbjct: 62  GHRPIILLGGGTGMVGDPSGKNEMRKMLTPEFINHNIECFKKQIGRFIDLSEG--KAIVA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D+LR +G  FSVNRML+ +  ++RL  +  L+F E NYMI+QAYDF  
Sbjct: 120 NNADWLLKLNYVDMLRSVGVHFSVNRMLAADCYKTRLASDNGLTFFEMNYMIMQAYDFYT 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+C +++GG DQW N+I G++L  R      + +T+ LLT + G KMGKT+ GA+W
Sbjct: 180 LHKNYNCVMELGGDDQWSNMIAGVELIRRKDRQPAYCMTNTLLTNSQGQKMGKTVGGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E  SPY+F+QYWRNIDDADV      LT LPM E+ R+  LQG EINEAKK++A E+
Sbjct: 240 LDPEKFSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALQGAEINEAKKVLAYEV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG  EAEKA  A    F    +  ++PTI++ KDE   G  LL L+ +     + +
Sbjct: 300 TKIVHGEAEAEKAKNATEALFGSGSNLDNVPTITVRKDEW--GCRLLDLLAENKVIATKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E RR ++ N + I+++ +++    +    F    ++ L  GKK +   
Sbjct: 358 EGRRLMQQNGLSIDDAKVTDVDTLVDDALFADKESLMLRKGKKKYYRL 405


>gi|226939536|ref|YP_002794609.1| Syy [Laribacter hongkongensis HLHK9]
 gi|254783613|sp|C1DCW5|SYY_LARHH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|226714462|gb|ACO73600.1| Syy [Laribacter hongkongensis HLHK9]
          Length = 425

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 228/424 (53%), Gaps = 13/424 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   + + +  L  RG I Q ++   L  L     VT Y G+D TA SLH GHL  L++L
Sbjct: 1   MS--ERNVIQELEARGLIAQQTDSGALQKLLESESVTLYCGFDPTADSLHLGHLVPLLML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI+L+GG T +IGDPSF+   R++     I   ++KI+   S F+ +  G 
Sbjct: 59  RRFQEAGHRPIALVGGATGMIGDPSFKAAERKLNTPDVIAGWVDKIRRQLSPFLSFE-GD 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMIL 179
             A+M NN  W   +  ++ LR+IG  FSVN M+  ESV+ R+ + +Q +SF EF+Y +L
Sbjct: 118 NAAVMANNYDWFGQMNVLEFLRDIGKHFSVNAMIKKESVQQRISREDQGISFTEFSYSLL 177

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  DF EL   + C+LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GK
Sbjct: 178 QGNDFAELNCRFGCKLQIGGSDQWGNITAGIDLTRRLNQQQVFGLTVPLITNSDGTKFGK 237

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +   A+WL+ +  SPY F+Q+W  + DADV  F +  T L + +ID    A        +
Sbjct: 238 SEGNAVWLDPQKCSPYKFYQFWLGVADADVYRFLRYFTFLSIEQIDAIEAADKTSGTRPQ 297

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS---IHSQHMPTISIS----KDEVSRGM 350
           A++I+A E T +VHG E  + A       F      + ++ +  +++      D   +G 
Sbjct: 298 AQRILAEEATRLVHGDEALKAAQRITESLFSNDLSALTAEDLAQLALDGLPVLDMAGQGD 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           GL+  +  +G A S +EAR  ++S A+ IN          +   D        L  GKK 
Sbjct: 358 GLIDALAASGLAKSKSEARTFIQSGAVSINGIKAEGLDYCLTGNDRLFGRYTLLKRGKKL 417

Query: 411 HIIC 414
           + + 
Sbjct: 418 YALL 421


>gi|119384647|ref|YP_915703.1| tyrosyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|189083666|sp|A1B3B3|SYY_PARDP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119374414|gb|ABL70007.1| tyrosyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 414

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 207/412 (50%), Positives = 278/412 (67%), Gaps = 4/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL+++ ERG++   ++ + LD     G VTAYIGYD TA+SLH GHL  +M+L W Q
Sbjct: 6   KSDFLNVMIERGYLADCTDMQALDDALIDGPVTAYIGYDATAASLHVGHLLNIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG++PI+LMGGGT+ +GDPSFR E R ++   +I ENI  +K +F+ ++    G   A+
Sbjct: 66  KTGNRPITLMGGGTTKVGDPSFRSEERPLLTPDKIDENIAGMKQVFARYL--DYGDQGAM 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL S+ Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 124 MLNNAEWLDSLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 184 LELYRRYGCRLQMGGSDQWGNIVNGIDLTRRVLDAEIWGLTSPLLTTSDGRKMGKSAGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN  M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A 
Sbjct: 244 VWLNGAMLSPYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALSGSEINAAKIILAN 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG + A  A   A E F+       +  +++S D ++ G+ ++ L+ + G   S
Sbjct: 304 EVTTLLHGADAAASAEATAREVFEQGGAGGDLEVVTLSADALASGLTVVQLLAQTGITAS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +    +++NN  +S+ +L +          +K+S GKK H +  L
Sbjct: 364 GKEAKRLIAEGGLRLNNEAVSDPQLAVDAALIGDG--LKVSVGKKKHRMVQL 413


>gi|110680333|ref|YP_683340.1| tyrosyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
 gi|122972642|sp|Q164D9|SYY_ROSDO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|109456449|gb|ABG32654.1| tyrosyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
          Length = 416

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 215/417 (51%), Positives = 288/417 (69%), Gaps = 3/417 (0%)

Query: 1   MPAF-KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    KSDF++++  RGF+   ++ + LD    +GV  AYIG+D TA SLH G L Q+M+
Sbjct: 1   MTYIPKSDFMAVMMARGFMADCTDYQGLDEALLKGVQPAYIGFDATAKSLHVGSLIQIMM 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L W QKTGHKP++LMGGGT+ +GDPSFR + R ++  + I +NI  IK +FS++I Y   
Sbjct: 61  LRWFQKTGHKPLTLMGGGTTKVGDPSFRADERPLLGPEAIDDNIAGIKQVFSAYIDYSDA 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            T ALMLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMIL
Sbjct: 121 PTGALMLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF+EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK
Sbjct: 181 QAYDFMELYRRYGCILQLGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           + SGA+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK
Sbjct: 241 SQSGAVWLNADMFSPYEFWQFWRNTTDADVGRFLKLYTELPLDECERLGALAGSEINAAK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A E+TT++HG E A  AA  A + F+       +PT+++S ++V++G+ ++ LIVK+
Sbjct: 301 ITLANEVTTLLHGAEAAATAAQTARDVFEKGGVGDDLPTLTLSAEDVAQGISIVQLIVKS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G A S  EA+R +  N  K++++ ++N  L I      S   IKLS GKK H +  L
Sbjct: 361 GLANSGKEAKRLIAENGAKMDDAPLTNAGLMIDAAALQSP--IKLSAGKKRHAMVQL 415


>gi|307295465|ref|ZP_07575301.1| tyrosyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306878504|gb|EFN09724.1| tyrosyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 405

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 282/415 (67%), Gaps = 11/415 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M ++ SD L +L  RG+IHQ+++   LD L ++ +V  YIG+D TA SLH GHL  +M+L
Sbjct: 1   MTSYSSDLLRLLETRGYIHQLTDAEGLDALAARQIVPGYIGFDPTAPSLHVGHLVSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK GHKPI LMGGGT  IGDPSF+DE+R+++ +  I EN+  IK +F  F+ +G G 
Sbjct: 61  RQLQKAGHKPIVLMGGGTGKIGDPSFKDEARKLLTTDLIAENVASIKRVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  ++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMLDNAEWLDRLEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ G++L  R+   ++F LT+PLLT A GTKMGKT
Sbjct: 181 AYDFLELSRRSACRLQMGGSDQWGNIVNGVELARRVDGTQVFGLTTPLLTNADGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN++  S Y++WQ+WRN  DADV +  +  T LPM E++R+A LQG EINEAKK
Sbjct: 241 VGGAVWLNEDQLSNYDYWQFWRNTADADVANRLRLFTDLPMDEVERLASLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T +  G E A  AA  A + F+      ++PT+S+     + G+ ++      G
Sbjct: 301 ILANEATALCRGAEAAVLAAETARKTFEEGASDANLPTVSLG----AEGLNIVQGTTALG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           FA S  E RR L   AI++N  ++S+  L +K  D       KLSFG K H +  
Sbjct: 357 FAASNKEVRRKLAEGAIRVNGEVVSDPALTLKAGD-------KLSFGAKKHGLVT 404


>gi|224023478|ref|ZP_03641844.1| hypothetical protein BACCOPRO_00180 [Bacteroides coprophilus DSM
           18228]
 gi|224016700|gb|EEF74712.1| hypothetical protein BACCOPRO_00180 [Bacteroides coprophilus DSM
           18228]
          Length = 430

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/428 (33%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHTMMPGTE--ELLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ + +     A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ ESV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKESVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    +++ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   EID +     +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTSLSKEEIDALTAEHEQAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH   +   A  A+   F  +                 + +P   +SK E+ 
Sbjct: 300 LAKEVTIMVHSEADYNAAVEASGILFGNATSDALKKLDEETLLSVFEGVPQFEVSKAEIE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L+ + A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGIKAVDLLTEKAAVFPSKGEMRKLVQGGGVSLNKEKLGAFDQVITAADLLDKKYLLIQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|213963510|ref|ZP_03391763.1| tyrosyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953790|gb|EEB65119.1| tyrosyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 431

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/432 (37%), Positives = 229/432 (53%), Gaps = 24/432 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L   Q
Sbjct: 1   MKNFIEELRWRGMIQDIMPETE--QHLMEGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
             GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +  T    A
Sbjct: 59  NCGHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESTAPNRA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
            ++NN  W+    ++  +R+IG   +VN M++ +SV+ R         +SF EF+Y +LQ
Sbjct: 119 ELVNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+
Sbjct: 179 GYDFLHLYQEKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEA 298
             G +WL+ E TSPY F+QYW NI DAD   + K  T L   EID +         +   
Sbjct: 239 EGGNVWLDPEKTSPYKFYQYWINISDADAERYIKIFTMLSKEEIDALIAQHAEAPHLRLL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +  +A E+T +VHGREE EKA  A+   F  S                   +P   +S  
Sbjct: 299 QNKLAEELTVLVHGREELEKAKKASQILFGNSTSADLRTLDEKTFLEVFDGVPQAEVSAA 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +++ G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D      I 
Sbjct: 359 DIAGGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKVG-EDYQIAEKDLVDGKFIL 417

Query: 404 LSFGKKNHIICH 415
           L  GKKN+ I  
Sbjct: 418 LQRGKKNYFIVK 429


>gi|77463048|ref|YP_352552.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|97201873|sp|Q3J3I3|SYY_RHOS4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77387466|gb|ABA78651.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 416

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 213/413 (51%), Positives = 278/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPAATLGEGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANTPVTAA--TVGEELKVSIGRKKHKLVRLS 416


>gi|224537287|ref|ZP_03677826.1| hypothetical protein BACCELL_02164 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521108|gb|EEF90213.1| hypothetical protein BACCELL_02164 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 430

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 152/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N++ +K   S F+ + +     A +
Sbjct: 60  GHKPMALIGGATGMIGDPSGKSAERNLLTEEILQRNLDGMKKQLSKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSREEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD VS
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEVSKDAVS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L    A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFTDNAAVFASKGEMRKLVQGGGVSLNKEKLEAFDQVITSADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|23099673|ref|NP_693139.1| tyrosyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81741419|sp|Q8CXA5|SYY_OCEIH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22777903|dbj|BAC14174.1| tyrosyl-tRNA synthetase (tyrosine-tRNA ligase) [Oceanobacillus
           iheyensis HTE831]
          Length = 428

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/425 (35%), Positives = 225/425 (52%), Gaps = 17/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG IHQ ++   L+       VT Y G+D TA SLH GHL  L +L   Q+ 
Sbjct: 2   DILQDLESRGLIHQTTDRERLEKHLQNNQVTLYCGFDPTADSLHIGHLVPLTMLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG--KTDAL 124
           GHKPI+L+GGGT +IGDPS R   R +   + +     K++   +  +   +   +   +
Sbjct: 62  GHKPIALVGGGTGMIGDPSGRSSERSLNAPEVVHGFTSKLQQQIAKLVDMESNASENTVV 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             NN  WL ++  ID LR+ G  F +N ML+ ESV +R+  EQ ++F EF+YMILQ+ D+
Sbjct: 122 ARNNHDWLGNMTIIDFLRDAGKHFGINYMLAKESVSARI--EQGITFTEFSYMILQSLDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-----KLFALTSPLLTTASGTKMGK 239
           ++L +  +C LQ+GGSDQWGNI  G++L  R +       ++F LT PL+T A GTK GK
Sbjct: 180 LKLYEEENCTLQIGGSDQWGNITAGMELIRRSRENLDENIEVFGLTVPLITKADGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T   AIWL+   TSPY F+Q+W N DD DV+ F +  T L + EI           E   
Sbjct: 240 TAGNAIWLDASKTSPYEFYQFWFNTDDRDVIRFIRYFTFLSVEEITELEKEVETQPEKRV 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMG 351
           A+K +A E+T  VH     E+A       F   I   ++  +  +  +V         +G
Sbjct: 300 AQKRLAEEMTKTVHDEAALEQAKRITNALFSGDIKQLNVEEVEQAFKDVPNHIITREPVG 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ L+V A  ++S  +AR  +K+ AI IN   + +    ++ +D        +  GKK +
Sbjct: 360 LIDLLVDAKISSSKRQAREDVKNGAIYINGERVQDMNYHVEEKDHLGNKFTVVRRGKKKY 419

Query: 412 IICHL 416
            +  +
Sbjct: 420 FLIQV 424


>gi|126461923|ref|YP_001043037.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|189029760|sp|A3PIU9|SYY_RHOS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126103587|gb|ABN76265.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 416

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 213/413 (51%), Positives = 277/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSNGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPAATLGDGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANAPVTAA--TVGEELKVSIGRKKHKLVRLS 416


>gi|197302947|ref|ZP_03167998.1| hypothetical protein RUMLAC_01675 [Ruminococcus lactaris ATCC
           29176]
 gi|197298028|gb|EDY32577.1| hypothetical protein RUMLAC_01675 [Ruminococcus lactaris ATCC
           29176]
          Length = 407

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 181/410 (44%), Positives = 252/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYEELQARGLIAQVTDEERIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRSDMRSMMTPEQIQHNCDCFKKQMSRFIDFSEG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF EL
Sbjct: 121 NADWLLDLNYIEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +NY C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQNYGCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T
Sbjct: 239 DPEKTSPFDFYQYWRNVGDADVLKCIRMLTFLPLEEIDKMDAWEGAQLNTAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+KA  +A   F    ++ +MPT  + + +   G + +L ++VK G A+S +
Sbjct: 299 KLVHGEEEAKKAQESARALFSQG-NADNMPTTELEEGDFQDGKIDILAVLVKGGQASSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR +    + ++   I++        DF+  G I    GKKN     +
Sbjct: 358 EARRAVTQGGVSVDGEKITDIATAYVPADFEGEGKIV-KKGKKNFRRVIV 406


>gi|116628549|ref|YP_821168.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122266856|sp|Q03IK0|SYY_STRTD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116101826|gb|ABJ66972.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 418

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 225/420 (53%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFNDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NAKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+       Q +    A+K++A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A             A+   D+ +    +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + +  
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVLT 417


>gi|293376351|ref|ZP_06622588.1| tyrosine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325843430|ref|ZP_08167988.1| tyrosine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292645040|gb|EFF63113.1| tyrosine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489352|gb|EGC91726.1| tyrosine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 422

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 228/422 (54%), Gaps = 12/422 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++FL  L  RG I+  ++   LD L  +G +T Y G+D TA SLH GHL  +++L   
Sbjct: 1   MKNEFLKDLQWRGLINDCTDFDALDELVEKGNITLYCGFDPTADSLHIGHLLMILILKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TD 122
           Q  GHKP++L+GG T +IGDPS R   R     + +++    IKG  S F+ +   +   
Sbjct: 61  QLAGHKPLALVGGATGLIGDPSGRSVERPDSNLETVEKWSNSIKGQLSQFLDFNETEANG 120

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A ++NN  W  ++  +D LR++G +F+VN +L+ + V SRL  ++ ++F EF+Y ILQ  
Sbjct: 121 AEIVNNYDWTSNVNMLDFLRDVGKYFNVNYILAKDLVCSRL--DKGMTFTEFSYTILQGM 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT 240
           DF  L +   C LQ+GGSDQWGNI  G++L  +      K   LT PL+T A GTK GKT
Sbjct: 179 DFKHLYETKKCVLQIGGSDQWGNITSGLELIRKQLGHEEKAVGLTMPLVTKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
             GA+WL+++ TSPY  +Q+  N  D DVV F K  T L   EI+       +   +   
Sbjct: 239 AGGAVWLDRKKTSPYELYQFLINTADEDVVKFLKYFTFLTKEEIEAVEAEFKEAPHLRHG 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLL 353
           +K++A E+ T+VHG E  E+A       F  ++       I      +   E++  + L+
Sbjct: 299 QKVLAREVVTLVHGVEAYEQALKITEALFSGNLAGLTAEEIEVGFKDVPSVELAEDLNLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V A  A+S  E+R  + +N+I IN   ++N +  +  ++        +  GKK + +
Sbjct: 359 DALVFAKAASSKRESREFINNNSILINGEKVNNLEFIVSKENAIGGKFTVIRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 IK 420


>gi|299145188|ref|ZP_07038256.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515679|gb|EFI39560.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 430

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/428 (33%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQKAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   +      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTANLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|148381266|ref|YP_001255807.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933916|ref|YP_001385642.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153934882|ref|YP_001389048.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|254783581|sp|A7FYR9|SYY_CLOB1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783585|sp|A5I748|SYY_CLOBH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148290750|emb|CAL84881.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929960|gb|ABS35460.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930796|gb|ABS36295.1| tyrosine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 407

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 177/413 (42%), Positives = 263/413 (63%), Gaps = 8/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +Q
Sbjct: 1   MSNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +      A+
Sbjct: 61  KAGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSED--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 MVNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA
Sbjct: 177 LELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           E+T ++HG EEA+KA  AA   F  +     +MPT  I K++++  +  L   VK     
Sbjct: 297 EVTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYIDKNDLNNLLVDLL--VKCEILP 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR +K   + +N+  +++  L +  +     G I +  GKKN     +
Sbjct: 355 SKSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKNFNRIVV 406


>gi|332557924|ref|ZP_08412246.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332275636|gb|EGJ20951.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 416

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 214/413 (51%), Positives = 278/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGRE AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGREAAEAAEATARAVFEEGGVGGALEVVELPAATLGDGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANAPVTAA--TVGEELKVSIGRKKHKLVRLS 416


>gi|327459630|gb|EGF05976.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327473095|gb|EGF18522.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327490874|gb|EGF22655.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 419

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 226/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+D  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHDVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSDSDKLEDELTVIRRGKKKYFVLT 418


>gi|168185553|ref|ZP_02620188.1| tyrosyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296217|gb|EDS78350.1| tyrosyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 408

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 176/416 (42%), Positives = 257/416 (61%), Gaps = 9/416 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +
Sbjct: 1   MENI--NVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH+PI+L+GGGT++IGDPS + + R+M+  ++I  ++  IK   S FI +  G 
Sbjct: 59  AHMQKAGHRPIALVGGGTAMIGDPSGKTDMRKMLTKEQIDIHVAGIKKQLSRFIDFSDG- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++Q
Sbjct: 118 -KAILVNNADWLLDAKYVEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT
Sbjct: 175 AYDFLELNRKYGCIMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKT 234

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK
Sbjct: 235 VGGALWLNAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVRRLSSLEGSAINEAKK 294

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T +VHG EEA+KA TAA   F       ++PTI I K+ V  G  LL +++   
Sbjct: 295 VLAFEVTKLVHGEEEAKKAQTAAEALFSGGADMSNVPTIEIEKEAV--GTLLLEILLNGK 352

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S  E RR ++   + +N+  +++    ++  D        +  GKK +    +
Sbjct: 353 AIPSKKEGRRLIEQGGLYMNDENVTDSNTVLQELDLKDGS-ALIKKGKKKYYRIVV 407


>gi|89070003|ref|ZP_01157335.1| tyrosyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044451|gb|EAR50582.1| tyrosyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 416

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 286/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F++ + ERGF+   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +MLL WLQ
Sbjct: 6   KSEFMARIMERGFLADCTDYQSLDEELSKGVVTAYIGYDATARSLHVGHLLNIMLLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F  ++ YG G T A 
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLGPEQIDANIAGMQAVFERYLDYGEGATGAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQMGGSDQWGNI+ G+DL  R+   +++ LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRHGCLLQMGGSDQWGNIVNGVDLTRRVLDREIYGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DAD   F K  T LP+ E +R+  L G EINEAK ++A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADTGRFLKLYTELPLEECERLGALGGAEINEAKIVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HGRE A  A   A E F+       +PT+++S DE + G+ ++ LIV+AG A S
Sbjct: 306 EVTALLHGREAAATAEATAREVFEKGGVGGDLPTLTLSADEAAGGVSVVQLIVRAGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  ++++  +++  L I  +   S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIADNGARLDDRPLTDAGLVIGTEQLASP--IKLSAGKKRHALVQL 415


>gi|306828567|ref|ZP_07461762.1| tyrosine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429366|gb|EFM32451.1| tyrosine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 418

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGERIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|146319969|ref|YP_001199680.1| tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751034|ref|YP_003024175.1| tyrosyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253752935|ref|YP_003026075.1| tyrosyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253754759|ref|YP_003027899.1| tyrosyl-tRNA synthetase [Streptococcus suis BM407]
 gi|189029779|sp|A4VYU1|SYY_STRS2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145690775|gb|ABP91280.1| Tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815323|emb|CAZ50892.1| putative tyrosyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817223|emb|CAZ54947.1| putative tyrosyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819180|emb|CAR44342.1| putative tyrosyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557577|gb|ADE30578.1| Tyrosyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319757286|gb|ADV69228.1| tyrosyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 418

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/418 (33%), Positives = 218/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K     +    A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E   +A     + F  +I +     +      V          + ++ L+V
Sbjct: 300 EVVTLVHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +G   S  +AR  +++ AI +N   + +    +   D        +  GKK + +  
Sbjct: 360 TSGIVNSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDKIDGELTVIRRGKKKYSVLT 417


>gi|332364273|gb|EGJ42048.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 419

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 225/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+D  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHDVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+KI+
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKIL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E   +A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYLEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVLT 418


>gi|290579692|ref|YP_003484084.1| putative tyrosyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996591|dbj|BAH87192.1| putative tyrosyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 418

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 222/420 (52%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 3   IFEELKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVMRHLQLVG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDDERSLQTKETVENWVQSIRNQLERFIDFKHGDNKAQMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWMGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHAVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           + + TSPY  +Q+W N+ DAD + F K  T L + EI+  R+          A+KI+A E
Sbjct: 241 DADKTSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLAQKILAKE 300

Query: 306 ITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           + T VHG+   ++A             ++   ++     ++P  ++     +    ++ L
Sbjct: 301 VVTFVHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKS---NDNHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  L++ AI IN   I +    +  QD        +  GKK + +  
Sbjct: 358 LVTAGIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGKKKYFVLT 417


>gi|86132456|ref|ZP_01051050.1| Tyrosyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817017|gb|EAQ38201.1| Tyrosyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 431

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 233/432 (53%), Gaps = 23/432 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG +H      E      + + +AY+G+D TA SLH G+L  +MLL   
Sbjct: 1   MIKNFVEELKWRGMVHDAMPQTE--EHLMEAMRSAYVGFDPTADSLHIGNLVPIMLLAHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q+ GH+P++L+GG T +IGDPS +   R ++  + ++ N E ++   S F+ + +G +  
Sbjct: 59  QRAGHRPVALVGGATGMIGDPSGKSSERNLLDEETLRHNQECVRKQLSQFLDFTSGAQNQ 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           ALM+NN  W+    ++D +R++G   +VN M++ +SV++RL  E    +SF EF Y ++Q
Sbjct: 119 ALMVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKNRLTGESADGMSFTEFTYQMVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            +DF+ L KN DC LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+
Sbjct: 179 GFDFLHLYKNNDCTLQMGGSDQWGNITTGTELIRRIAGGKGYALTCPLITKSDGSKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
             G +WL+   TSPY F+QYW N  D D   + K  T L   EI+ + +           
Sbjct: 239 EGGNVWLDANRTSPYKFYQYWLNTSDEDAAKYIKIFTFLDREEIEALIETHKEAPHQRAL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +K +A E+TT VH  E   KA  A+   F  S                 + +P   I+K 
Sbjct: 299 QKRLAEEVTTTVHDEEALTKAIAASNMLFGKSTSEDLKSLDEATFLDVFEGVPQAEIAKT 358

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E+  G+ ++  + +  GF  S  EARR LK N+I +N   +  E   I+  D  +   I 
Sbjct: 359 EIEAGLDMIAALAEKTGFLKSNGEARRALKENSISLNKEKV-GEDRTIQSSDLINDTFIL 417

Query: 404 LSFGKKNHIICH 415
           L  GKKN+ +  
Sbjct: 418 LQRGKKNYFLIR 429


>gi|223933066|ref|ZP_03625059.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330831970|ref|YP_004400795.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223898253|gb|EEF64621.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329306193|gb|AEB80609.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 418

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 219/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K     +    A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E   +A     + F  +I +     +      V          + ++ L+V
Sbjct: 300 EVVTLVHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +G  TS  +AR  +++ AI +N   + +    +   D        +  GKK + +  
Sbjct: 360 TSGIVTSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDKIDGELTVIRRGKKKYSVLT 417


>gi|325693921|gb|EGD35840.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 419

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 225/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHSVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVLT 418


>gi|153807144|ref|ZP_01959812.1| hypothetical protein BACCAC_01421 [Bacteroides caccae ATCC 43185]
 gi|149130264|gb|EDM21474.1| hypothetical protein BACCAC_01421 [Bacteroides caccae ATCC 43185]
          Length = 430

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 145/428 (33%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLIKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQAAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALT 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 GGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITAADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|167768079|ref|ZP_02440132.1| hypothetical protein CLOSS21_02624 [Clostridium sp. SS2/1]
 gi|167710408|gb|EDS20987.1| hypothetical protein CLOSS21_02624 [Clostridium sp. SS2/1]
 gi|291561074|emb|CBL39874.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 409

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 172/412 (41%), Positives = 252/412 (61%), Gaps = 5/412 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +   +L ERGFI Q ++   L  L  +  VT YIG+D TA SL AGH   +M +  +
Sbjct: 1   MSQNVYDVLQERGFIAQTTHEE-LRELLGKEKVTFYIGFDATADSLTAGHFLTIMAMMHM 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI+L+GGGT++IGDPS + + R M+  + I  N ++ K   S FI +      A
Sbjct: 60  QKAGHRPIALLGGGTTMIGDPSGKSDMRNMLTKETIDHNAKRFKEQLSRFITFDDD--KA 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL ++ Y++ LRE+G  FSVN+ML+ E  + R+  E+ L+F EFNYM++Q YD
Sbjct: 118 ILANNADWLLNLNYVEFLREVGVHFSVNKMLTAECYKQRM--ERGLTFFEFNYMLMQGYD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C+L+MGG+DQW NI+ G DL  R +    + LT  LLT + G KMGKT++G
Sbjct: 176 FLELNRRYGCKLEMGGNDQWSNILAGADLIRRKEKKDAYGLTLTLLTRSDGVKMGKTMAG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ E TSPY+F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN+AK+++A
Sbjct: 236 AVWLDPEKTSPYDFYQYWRNIEDVKVEECLSLLTFLPMDEVRRLGALEGAEINKAKEVLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T +VHG EEA+KA TAA   F     ++  PT     D+++ G+ +LT++V +   T
Sbjct: 296 YEVTKIVHGEEEAKKAQTAAKAMFVSGGANEDAPTFEYEADKLAEGIDILTMLVDSKLCT 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + ++ARR ++   + +N   +          DFD    I L  GKK      
Sbjct: 356 TRSDARRMVQQGGVSVNGKKVDAIDATFGKADFDDKDRILLKKGKKKFCQIK 407


>gi|167770729|ref|ZP_02442782.1| hypothetical protein ANACOL_02075 [Anaerotruncus colihominis DSM
           17241]
 gi|167667324|gb|EDS11454.1| hypothetical protein ANACOL_02075 [Anaerotruncus colihominis DSM
           17241]
          Length = 408

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 175/410 (42%), Positives = 264/410 (64%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ RG I Q+++P +++ L +   VT YIG+D TA SLH GH  Q++++  LQ+ G
Sbjct: 3   VFEELTRRGLIAQMTHPEKIEELLNGEKVTFYIGFDATADSLHVGHFLQMVVMKRLQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+G GT+++GDP+ + + R+M+  +EI  N    K     FI +  G   ALML 
Sbjct: 63  HRPIALLGTGTTMVGDPTGKTDMRKMLSVEEINHNAMCFKRQMEKFIDFSDG--KALMLK 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+LLR++G  FSVN ML+ E  ++RL  E+ LSF+EFNYMI+Q+YDF++L
Sbjct: 121 NGDWLLHLNYIELLRDVGVHFSVNEMLTAECFKTRL--EKGLSFIEFNYMIMQSYDFLKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q+GG+DQW NI+ GI L  R+    ++ +T  LLTT  G KMGKT +GA+WL
Sbjct: 179 HRDYGCMMQLGGNDQWANILGGIKLTRRVTGDDVYGMTFTLLTTKEGKKMGKTENGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSPY F+QYWRN+ D DV++  K LT +P+ EI+ M K +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPYEFFQYWRNVADDDVINCLKLLTFVPIEEIEAMEKWEGSQLNKAKEILAHELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG++EA+KA  AA   F    HS  MPT S+   +++ G + +  L+VK G A S  
Sbjct: 299 KMVHGQQEADKALEAARAIFAGGTHSDDMPTTSLVSSDLADGAISVADLLVKTGLAPSKG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA+R ++   + +++  +S+    I  + FD    + L  GKK +    L
Sbjct: 359 EAKRLIQQGGVSVDDVKVSDFAAVIGKESFDKGQ-VILKKGKKIYHKVLL 407


>gi|302023205|ref|ZP_07248416.1| tyrosyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 428

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 223/420 (53%), Gaps = 12/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVVILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K     +    A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E   +A     + F  +I +     +      V          + ++ L+V
Sbjct: 300 EVVTLVHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI-KLSFGKKNHIICHL 416
            +G  TS  +AR  +++ AI +N   + +    +   D D  G +  +  GKK + +  L
Sbjct: 360 TSGIVTSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDRDLDGELTVIRRGKKKYSVLTL 419


>gi|332292105|ref|YP_004430714.1| tyrosyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170191|gb|AEE19446.1| tyrosyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 431

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 155/432 (35%), Positives = 234/432 (54%), Gaps = 23/432 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG IH +    E      + + +AY+G+D TA SLH G+L  +MLL   
Sbjct: 1   MIKNFVEELQWRGMIHDVMPQTE--EHLMEAMRSAYVGFDPTADSLHIGNLVPIMLLAHY 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q++GH+P++L+GG T +IGDPS +   R ++  + ++ N E +K   S F+ + +G +  
Sbjct: 59  QRSGHRPVALVGGATGMIGDPSGKSSERNLLDEKTLRHNQECVKSQLSQFLDFTSGAENQ 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQ 180
           AL++NN  W+    ++D +R++G   +VN M++ +SV++RL  +    +SF EF Y ++Q
Sbjct: 119 ALLVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKNRLTGEDADGMSFTEFTYQMVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L KN    LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+
Sbjct: 179 GYDFLHLYKNEGITLQMGGSDQWGNITTGTELVRRIGGGKGYALTCPLITKSDGSKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G +WLN + TSPY F+QYW N  D D   + K  T L   EI+    A  +       
Sbjct: 239 EGGNVWLNAKRTSPYKFYQYWLNTTDEDAEKYIKIFTFLDREEIEALVAAHKEAPHQRAL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +K +A E+TT VH  E  EKA  A+   F  S                 + +P   I K 
Sbjct: 299 QKRLAEEVTTTVHDAEALEKAIAASNILFGKSTSDDLKSLDEATFLDVFEGVPQAEIEKS 358

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E+  G+ ++  + +  GF  S  EARR LK N+I IN   +  E   I+  D  +   + 
Sbjct: 359 EIEAGLDIIAALAEKTGFLKSNGEARRALKENSISINKEKV-GEDYTIQTTDLINGTFVL 417

Query: 404 LSFGKKNHIICH 415
           L  GKKN+ +  
Sbjct: 418 LQRGKKNYFVIR 429


>gi|317499370|ref|ZP_07957638.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893339|gb|EFV15553.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 409

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 172/412 (41%), Positives = 252/412 (61%), Gaps = 5/412 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +   +L ERGFI Q ++   L  L  +  VT YIG+D TA SL AGH   +M +  +
Sbjct: 1   MSQNVYDVLQERGFIAQTTHEE-LRELLGKEKVTFYIGFDATADSLTAGHFLTIMAMMHM 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI+L+GGGT++IGDPS + + R M+  + I  N ++ K   S FI +      A
Sbjct: 60  QKAGHRPIALLGGGTTMIGDPSGKSDMRNMLTKETINHNAKRFKEQLSRFITFDDD--KA 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL ++ Y++ LRE+G  FSVN+ML+ E  + R+  E+ L+F EFNYM++Q YD
Sbjct: 118 ILANNADWLLNLNYVEFLREVGVHFSVNKMLTAECYKQRM--ERGLTFFEFNYMLMQGYD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C+L+MGG+DQW NI+ G DL  R +    + LT  LLT + G KMGKT++G
Sbjct: 176 FLELNRRYGCKLEMGGNDQWSNILAGADLIRRKEKKDAYGLTLTLLTRSDGVKMGKTMAG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ E TSPY+F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN+AK+++A
Sbjct: 236 AVWLDPEKTSPYDFYQYWRNIEDVKVEECLSLLTFLPMDEVRRLGALEGAEINKAKEVLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T +VHG EEA+KA TAA   F     ++  PT     D+++ G+ +LT++V +   T
Sbjct: 296 YEVTKIVHGEEEAKKAQTAAKAMFVSGGANEDAPTFEYEADKLAEGIDILTMLVDSKLCT 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + ++ARR ++   + +N   +          DFD    I L  GKK      
Sbjct: 356 TRSDARRMVQQGGVSVNGKKVDAIDATFGKADFDDKDRILLKKGKKKFCQIK 407


>gi|148554432|ref|YP_001262014.1| tyrosyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148499622|gb|ABQ67876.1| tyrosyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 420

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 200/415 (48%), Positives = 274/415 (66%), Gaps = 9/415 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++   LD L    V+  YIG+D TA SLH G L Q+MLL
Sbjct: 14  MTEYRSDLLRLLDERGYIHQVTDGAALDALALSSVIPGYIGFDPTAPSLHVGSLVQIMLL 73

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R++M ++ I  N+  IK IF  F+ +G G 
Sbjct: 74  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLMTTETIAANVASIKRIFERFLTFGDGP 133

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M++N  WL +++YI  LRE+G  FS+NRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 134 SDAVMVDNADWLDTLEYIPFLREVGQHFSINRMLSFDSVKLRLDREQSLSFLEFNYMILQ 193

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+ELAK   CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PL+TTA G KMGKT
Sbjct: 194 AYDFMELAKRRQCRLQMGGSDQWGNIVNGIELSRRMLGTEVFGVTTPLITTADGGKMGKT 253

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           +SGA+WLN+E    Y++WQ+WRN  D DV  F +  T LP+ EI R+  L+G+EIN+AK 
Sbjct: 254 MSGAVWLNEESLPAYDYWQFWRNSHDKDVGRFLRLFTDLPLDEIARLEALEGQEINQAKI 313

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E T M  G + A  AA  A   F+       +PT+++       G+ L+  +V  G
Sbjct: 314 VLANEATAMCRGADAAAAAAETARRTFEEGQAGGDLPTLAVP----EGGISLIDALVGLG 369

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           F  S  EA+R L   A++++     +++             +K+S GKK H +  
Sbjct: 370 FTASKGEAKRKLAEGAVRVDGEPEKDDRRV-----EIGATALKISLGKKKHGLLT 419


>gi|229497108|ref|ZP_04390812.1| tyrosyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316033|gb|EEN81962.1| tyrosyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 431

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/431 (33%), Positives = 233/431 (54%), Gaps = 22/431 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +DF+  L  RG +H I    E     S+ + TAY+G D TA SLH GHL  +M+L   Q
Sbjct: 1   MNDFVEELRWRGMLHNIMPGTE--EQLSKELSTAYVGIDPTADSLHIGHLVGVMMLRHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GH+PI+L+GG T +IGDPS +   R ++  + ++ N E I    + F+ +       A
Sbjct: 59  RFGHRPIALLGGATGMIGDPSMKSAERNLLSLETLRHNQEAIGKQLAKFLDFDSEQPNAA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
            ++NN  W+   +++D +RE+G   +VN M++ +SV+ R +      LSF EF+Y +LQ 
Sbjct: 119 KLVNNYDWMSEWRFLDFIREVGKHITVNYMMAKDSVKKRFEGTAGSGLSFTEFSYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YD++ L ++ +CRLQMGGSDQWGNI  G +L  R++  + FALT PL+T A G K GKT 
Sbjct: 179 YDYLYLYRHENCRLQMGGSDQWGNITTGTELIRRIEGGEAFALTCPLITKADGGKFGKTE 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
            G +WL++  TSPY F+Q+W N+ D D   + K  T L   EI+ +   Q     +   +
Sbjct: 239 KGNVWLDRRYTSPYAFYQFWLNVSDEDAARYIKIFTFLGKEEIEDLVAQQAAAAHLRPLQ 298

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSI--------------HSQHMPTISISKDE 345
           + +A E+T +VH RE+ E A +A+   F                    + +P  SI++D 
Sbjct: 299 RRLAEELTVLVHSREDYEAAVSASEILFGNGTADALRSLDEEMLLSVMEGVPHFSIARDT 358

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++     + L  + A    S  E R+ +KS  + +N + +++ +  +   D  +   + +
Sbjct: 359 LATQPKAVDLFTEGAAIFPSKGELRKLIKSGGVSLNKAKLTDTEATVSASDLIAGRYLLV 418

Query: 405 SFGKKNHIICH 415
             GKK + +  
Sbjct: 419 QRGKKQYYLVT 429


>gi|221638906|ref|YP_002525168.1| Tyrosyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783626|sp|B9KQU0|SYY_RHOSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|221159687|gb|ACM00667.1| Tyrosyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 416

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 213/413 (51%), Positives = 280/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDKQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++   +I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDKIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDHLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRYGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPATTLGEGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  + ++ NN  + +    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAESGLRFNNEPVGDANAPVTAA--TVGEELKVSIGRKKHKLVRLS 416


>gi|198274138|ref|ZP_03206670.1| hypothetical protein BACPLE_00275 [Bacteroides plebeius DSM 17135]
 gi|198273216|gb|EDY97485.1| hypothetical protein BACPLE_00275 [Bacteroides plebeius DSM 17135]
          Length = 430

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/428 (33%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVDELRWRGMVHTMMPGTE--ELLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ + +     A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ ESV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKESVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   EI+ +     +   +   +K 
Sbjct: 240 NIWLDARYTSPYKFYQFWLNVSDEDAKRYIKIFTSLSKEEIEGLIAEHEQAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH   +   A  A+   F  +                 + +P   ++K ++ 
Sbjct: 300 LAKEVTIMVHSEADYNAAVEASGILFGNATSEALKKLDEDTLLSVFEGVPQFEVAKSDIE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++   + +N   ++    +I   D      + +  
Sbjct: 360 AGIKAVDLFTEKAAIFPSKGEMRKLVQGGGVSLNKEKLAAFDQEITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|182414498|ref|YP_001819564.1| tyrosyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|254783620|sp|B1ZUZ4|SYY_OPITP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|177841712|gb|ACB75964.1| tyrosyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 425

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 220/423 (52%), Gaps = 13/423 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG     ++   L     QG VT Y G+D TA SLH G+L  L+ L   Q  G
Sbjct: 3   ILDDLQWRGLYADCTDLAALTQRLGQGPVTLYCGFDPTADSLHVGNLVPLLALRRFQLHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L GG T ++GDPS R   R ++   ++  NI  IK     F+ +      A M++
Sbjct: 63  HHPIALAGGATGMVGDPSGRSAERNLLTPDQVAHNIASIKQQLGRFLDFDATTNPARMVD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TW   I +++ LR++G  FSVN ML+ ESVR+RL+ E  +S+ EF+YM+LQA+DF+ L
Sbjct: 123 NSTWTAPISFLEFLRDVGKHFSVNAMLAKESVRARLESESGISYTEFSYMLLQAHDFLHL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +  +C LQ+G +DQWGNI  G DL  +      + LT PLLT + GTK GK+ SGA++L
Sbjct: 183 RETMNCELQVGATDQWGNITAGTDLIRKKLGAPAWGLTFPLLTKSDGTKYGKSTSGAVYL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           + + T+PY F+Q++   +DADV+   K LT L   EI               A+K +A  
Sbjct: 243 DPKRTTPYRFYQFFVQAEDADVIKLLKVLTFLSAEEITALDTDLKANPGARAAQKALARA 302

Query: 306 ITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVS-RGMGLLT 354
           +TT+VHG  E   A  A+   F                  +PT  +   ++S  G  L+ 
Sbjct: 303 VTTLVHGDTECANAIRASEIMFGGGLDGISESLFQDVVGEIPTKELEAAKLSGAGAPLVE 362

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V AG A S  +AR+ +    I +NN+ +      +   +      + L  GK+ + + 
Sbjct: 363 LLVHAGLAPSKGQARKDIDGGGIYVNNARVGEASRAVTTGELLFGKYLLLRKGKRTYTVV 422

Query: 415 HLC 417
            + 
Sbjct: 423 KIV 425


>gi|251780345|ref|ZP_04823265.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084660|gb|EES50550.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 406

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 174/412 (42%), Positives = 252/412 (61%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDELLDRGYIKQFTHEEETRKLLGNEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +      AL
Sbjct: 61  RAGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDD--KAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 IVNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA
Sbjct: 177 YVLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A 
Sbjct: 237 LWLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA+KA  AA   F       ++PT++I K+++  G  +L +I K     S
Sbjct: 297 EVTKLVHGEEEAKKAEEAANALFSGGADMSNVPTVTIVKEDL--GSTVLDIIAKTKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   + IN   I++    +   DF       +  GKKN+    +
Sbjct: 355 KKEGRRLIEQGGLSINGEKITDLTRTLNEDDFKDGS-ALIKRGKKNYNKIEI 405


>gi|325688487|gb|EGD30504.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 419

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 223/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKTLEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ +            A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRHQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDSLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +        D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVFSSADKLEDELTVIRRGKKKYFVLT 418


>gi|146276975|ref|YP_001167134.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|189029761|sp|A4WR15|SYY_RHOS5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145555216|gb|ABP69829.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 416

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 215/413 (52%), Positives = 280/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEAMSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++  ++I  NI  +K +F+ ++ Y  G T AL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPEKIDANIAGMKQVFARYLDYSDGATGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL S+ Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDSLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRYGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK  +A 
Sbjct: 246 VWLSGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGAEINGAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGRE AE A   A   F+       +  + I+   +  G+ +   +V AG  TS
Sbjct: 306 EVTTLLHGREAAEAAEATARAVFEQGGVGGALEVVEIAPATLGEGLSVTHFLVAAGLVTS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  +S+    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVSDANAPVTAAMI--GDELKVSIGRKKHKLVRLA 416


>gi|327467040|gb|EGF12554.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 419

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 226/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YILNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLTLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    + + D        +  GKK + +  
Sbjct: 359 LVTAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLNVSDKLEDELTVIRRGKKKYFVLT 418


>gi|296877134|ref|ZP_06901174.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|322390724|ref|ZP_08064236.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|296431654|gb|EFH17461.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|321142551|gb|EFX38017.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 428

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 13  IFDELKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + +QE +  I+G  S F+ +  G   A M+N
Sbjct: 73  HKPYALVGGATGLIGDPSFKDAERSLQTKETVQEWVRSIQGQLSRFLDFENGDNKAEMVN 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 133 NYDWFGSISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 190

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 191 NQEHNVTLQIGGSDQWGNMTAGTELMRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 250

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N + TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+KI+A E
Sbjct: 251 NADKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 310

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +    + ++ L+V 
Sbjct: 311 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 370

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 371 AGVVNSKRQAREDVQNGAIYVNGERIQDLDYVLSDSDKLENELTVIRRGKKKYFVLT 427


>gi|188590186|ref|YP_001922290.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|254783583|sp|B2UYM8|SYY_CLOBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188500467|gb|ACD53603.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 406

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 174/412 (42%), Positives = 253/412 (61%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDELLDRGYIKQFTHEEETRKLLENEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +      AL
Sbjct: 61  RAGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDD--KAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 IVNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA
Sbjct: 177 YVLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A 
Sbjct: 237 LWLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA+KA  AA   F       ++PT++I+K+++  G  +L +I K     S
Sbjct: 297 EVTKLVHGEEEAKKAEEAANALFSGGADMSNVPTVTIAKEDL--GSTVLDIIAKTKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   + IN   I +    +   DF+      +  GKKN+    +
Sbjct: 355 KKEGRRLIEQGGLSINGEKIIDLTRTLNEDDFEDGS-ALIKRGKKNYNKIEI 405


>gi|260655484|ref|ZP_05860972.1| tyrosine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629932|gb|EEX48126.1| tyrosine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 427

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 163/422 (38%), Positives = 234/422 (55%), Gaps = 11/422 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L ERG++   S+   L+ L  +G VTAY+G+D TA SLH GHL  LM L WLQ
Sbjct: 1   MNDALKTLRERGYVDWCSDEEGLNALFEKGQVTAYVGFDPTADSLHVGHLIPLMGLAWLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI L GGGT +IGDPS + + R ++  ++++ N+E IK   S  + +  G   AL
Sbjct: 61  KLGHRPILLAGGGTGMIGDPSMKSKERNLLSDEQVRRNVEGIKVQLSRLVDFDCGSASAL 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYD 183
           ++NN  WL  +  ID LR++G FFSVN M+  E VRSR+    ++LS+ EF Y +LQAYD
Sbjct: 121 LVNNYDWLGKLNLIDFLRDVGKFFSVNYMIRKEHVRSRIEDPNKTLSYTEFTYTLLQAYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K + CRLQMGG+DQ GN++ GI+L  +      +A T+PLL  +SGTK GKT  G
Sbjct: 181 FWHLFKTFGCRLQMGGNDQQGNLVSGIELIRKWDGETAYAATNPLLLNSSGTKFGKTEGG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
           A+WL+ E TSPY F+Q+W N +D  V    K  T LP+ EID++            A++ 
Sbjct: 241 AVWLSPEKTSPYKFYQFWMNSEDEAVEKLLKLFTFLPLEEIDQIVAEHQANPGRRAAQRR 300

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHM--PTISISKDEVSRG------MGLL 353
           +A EIT+++HG E A+ A  A+   F   +    +  P +SI   E   G        L 
Sbjct: 301 LALEITSIIHGEEAAKAAQRASEILFGGQVAHDELTGPMLSIIASETEGGSIESLPCQLA 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +G   S  E +R      + +N   +     ++   D     +  +  GKK +  
Sbjct: 361 EALVASGACASKGEVKRLTSGGGLYLNGDRVETSDRELTESDLLDGKHALVRLGKKKYFT 420

Query: 414 CH 415
             
Sbjct: 421 LR 422


>gi|160895404|ref|ZP_02076174.1| hypothetical protein CLOL250_02962 [Clostridium sp. L2-50]
 gi|156862975|gb|EDO56406.1| hypothetical protein CLOL250_02962 [Clostridium sp. L2-50]
          Length = 413

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 175/411 (42%), Positives = 251/411 (61%), Gaps = 7/411 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K      L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ
Sbjct: 7   KMKVYDELVARGLIAQTTDEEEIKELVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQ 66

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G+KPI+L+GGGT++IGDPS R + R+MM ++ I  N+E  K   S FI +  G   AL
Sbjct: 67  MAGNKPIALIGGGTAMIGDPSGRTDMRQMMTTETIAHNVECFKKQMSRFIDFSEG--KAL 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  + Y+D+LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF
Sbjct: 125 LVNNADWLLDLNYVDVLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA
Sbjct: 183 YELFQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A 
Sbjct: 243 VWLDPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGSQLNTAKEILAF 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFAT 363
           E+T +VHG EEA KA  +A   F   +    MP++++S D+   G + +++++VK+G  +
Sbjct: 303 ELTKLVHGEEEAVKAQESARALFSQGVA-ADMPSVTLSADDFKDGAIDIVSVLVKSGLVS 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S NE RR ++   + ++   I +  + I  + FD  G I +  GKKN    
Sbjct: 362 SRNEGRRAVEQGGVAVDGDKIPDISVTIPEEKFDGDG-IVVRRGKKNFRKV 411


>gi|154493400|ref|ZP_02032720.1| hypothetical protein PARMER_02737 [Parabacteroides merdae ATCC
           43184]
 gi|154086610|gb|EDN85655.1| hypothetical protein PARMER_02737 [Parabacteroides merdae ATCC
           43184]
          Length = 430

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/430 (34%), Positives = 235/430 (54%), Gaps = 22/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG I  +    E      + + +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELTWRGMIADMMPGTE--EQLQKEMTSAYVGIDPTADSLHIGHLVSVMMLKHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   S F+ + +     A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDSIKKQLSKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ ESV+ RL RE    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKESVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YMYLYEHEGCRLQMGGTDQWGNITTGTELIRRKLGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ DAD   + K  T LP  EID     + +   +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLPKEEIDALIKEQEEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVS 347
           +A E+T MVH +E+ + A  A+   F  S                   +P   +S++E+S
Sbjct: 300 LAKEVTVMVHSQEDYDAAVEASNILFGNSTSEALKHLDEQTLLDVFNGVPQFEVSREELS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  I +N   ++++ + I          + +  
Sbjct: 360 AGVKAIDLFTEKAAIFPSKGEMRKLVQSGGISVNKEKLTDQDMVIDCSSLLDEKYLLVQR 419

Query: 407 GKKNHIICHL 416
           GKKN+ +  +
Sbjct: 420 GKKNYYLLIV 429


>gi|315223534|ref|ZP_07865389.1| tyrosine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946450|gb|EFS98444.1| tyrosine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 450

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/435 (36%), Positives = 228/435 (52%), Gaps = 24/435 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
                +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L 
Sbjct: 17  TKLMKNFIEELRWRGMIQDIMPETE--QHLMEGLRAAYVGIDPTADSLHIGHLVGVMMLR 74

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGK 120
             Q  GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +  T  
Sbjct: 75  HFQNCGHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESTAP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYM 177
             A ++NN  W+    ++  +R+IG   +VN M++ +SV+ R         +SF EF+Y 
Sbjct: 135 NRAELVNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQ 194

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK 
Sbjct: 195 LLQGYDFLHLYREKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKF 254

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
           GK+  G +WL+ E TSPY F+QYW N  DAD   + K  T L   EI+ +         +
Sbjct: 255 GKSEGGNVWLDPEKTSPYKFFQYWINTSDADAERYIKIFTMLSKEEINTLIAQHTEAPHL 314

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISI 341
              +  +A E+T +VHGREE EKA  A+   F  S                   +P   +
Sbjct: 315 RILQNKLAEELTLLVHGREELEKAKKASQILFGNSTSADLRTLDEKTFLEVFDGVPQAEV 374

Query: 342 SKDEVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           S  +++ G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D     
Sbjct: 375 SAADITSGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKV-GEDYQIGEKDLVDEK 433

Query: 401 NIKLSFGKKNHIICH 415
            I L  GKKN+ I  
Sbjct: 434 FILLQRGKKNYFIVK 448


>gi|188582413|ref|YP_001925858.1| tyrosyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345911|gb|ACB81323.1| tyrosyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 423

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 220/413 (53%), Positives = 296/413 (71%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L WLQ
Sbjct: 9   KSDFIRVLQERGYIHQASDLPGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHWLQ 68

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  F+ F+ +G    DA+
Sbjct: 69  KTGGKPVVLMGGGTTRVGDPSGRDEARKILTLEQIEANKEGIKQTFARFLSFGEAGNDAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+YDF
Sbjct: 129 MVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTTASG KMGKT +GA
Sbjct: 189 VELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTASGAKMGKTAAGA 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK I+AT
Sbjct: 249 VWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTILAT 308

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAGFA 362
           E T ++HG E A  AA  A + F     +Q +PTI +    +  G+G+LT      A   
Sbjct: 309 EATALMHGAEAATAAAETARKTFVEGTLAQSLPTIPVPSAVLEAGLGVLTAFGPDYARLV 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR +K   +++N+  +S+EK  ++  D  + G IKLSFG+K H++  
Sbjct: 369 PSTSEARRQIKGGGLRVNDVQVSDEKAVLRPSDLTAEGVIKLSFGRKKHVLLR 421


>gi|331083835|ref|ZP_08332944.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330403260|gb|EGG82820.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 406

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 177/410 (43%), Positives = 252/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEEEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K     FI +  G   A+M+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRSDMRSMMTPEIIQHNCDCFKKQMERFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVADADVLKCIRMLTFLPLEQIDEMDKWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG+EEAEKA  AA   F    ++ +MP+  I + ++  G + L++L+ K+G A + +
Sbjct: 299 ALVHGKEEAEKAQEAARALFSSG-NAANMPSAKIEEADLVDGNIDLISLLHKSGLANTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + I+   +++ K  +  +     G I L  GKKN     L
Sbjct: 358 EARRAIEQGGVAIDGEKVTDIKHLVSGEKLQGDG-IVLKKGKKNFRKVTL 406


>gi|42520919|ref|NP_966834.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|58698303|ref|ZP_00373220.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630967|ref|YP_002727758.1| Tyrosyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|81652226|sp|Q73G50|SYY_WOLPM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765189|sp|C0R4X5|SYY_WOLWR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|42410660|gb|AAS14768.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|58535176|gb|EAL59258.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592948|gb|ACN95967.1| Tyrosyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 416

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 210/412 (50%), Positives = 291/412 (70%), Gaps = 2/412 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD L      + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IKYID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKYIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T + HG +EAE A  AA+  F+ +  S  +P   I K++V+ G+ L+ L+   GF  S
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFE-NEDSSLLPDYIIKKEQVASGISLVDLLHDTGFEPS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              A+R ++ N  KIN+++++N    I  + F     IKLS GKK HI   +
Sbjct: 364 KGAAKRLIQGNGCKINDNVVNNIDHVINFESFKDQPFIKLSAGKKRHIKVVV 415


>gi|189460189|ref|ZP_03008974.1| hypothetical protein BACCOP_00826 [Bacteroides coprocola DSM 17136]
 gi|189433050|gb|EDV02035.1| hypothetical protein BACCOP_00826 [Bacteroides coprocola DSM 17136]
          Length = 430

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHTMMPGTE--ELLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ + +     A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+LP  EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTSLPKEEIDALIAEHEPAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH   + E A  A+   F  +                 + +P   +SK ++ 
Sbjct: 300 LAKEVTIMVHSEADYEAAVEASGILFGNATSEALKKLDEDTLLSVFEGVPQFEVSKTDIE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++   + +N   ++    +I   D      + +  
Sbjct: 360 AGIKAVDLFTEKAAVFASKGEMRKLVQGGGVSLNKEKLTAFDQEITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|218258724|ref|ZP_03475033.1| hypothetical protein PRABACTJOHN_00688 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225250|gb|EEC97900.1| hypothetical protein PRABACTJOHN_00688 [Parabacteroides johnsonii
           DSM 18315]
          Length = 430

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/430 (34%), Positives = 235/430 (54%), Gaps = 22/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG I  +    E      + + +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELTWRGMIADMMPGTE--EQLQKEMTSAYVGIDPTADSLHIGHLVSVMMLKHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   S F+ + +     A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDSIKKQLSKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ ESV+ RL RE    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKESVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YMYLYEHEGCRLQMGGTDQWGNITTGTELIRRKLGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ DAD   + K  T LP  EID     + +   +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLPKDEIDALIKEQEEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVS 347
           +A E+T MVH +E+ + A  A+   F  S                   +P   +S+DE+S
Sbjct: 300 LAKEVTIMVHSQEDYDAAVEASNILFGNSTSEALKHLDEQTLLDVFNGVPQFEVSRDELS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  I +N   ++++ + I          + +  
Sbjct: 360 AGVKAIDLFTEKAAIFPSKGEMRKLVQSGGISVNKEKLTDQDMVIDCSSLLDEKYLLVQR 419

Query: 407 GKKNHIICHL 416
           GKKN+ +  +
Sbjct: 420 GKKNYYLLIV 429


>gi|239978757|ref|ZP_04701281.1| putative tyrosyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291450647|ref|ZP_06590037.1| tyrosyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353596|gb|EFE80498.1| tyrosyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 423

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/424 (33%), Positives = 222/424 (52%), Gaps = 11/424 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           + G +P++L+GG T  IGDP      R +   + + E + +++     F+ +       A
Sbjct: 61  QAGLRPLALVGGATGQIGDPRP-TAERTLNSPETVAEWVNRLRDQIEPFLDFDASLPNAA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W  ++  I+ LR+IG  F VN+ML+ ESV  RL+ ++ +S+ EF+Y +LQ  D
Sbjct: 120 RMVNNLDWTANLSAIEFLRDIGKHFRVNKMLTKESVARRLESQEGISYTEFSYQLLQGMD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLS 242
           F++L +NY C LQ GGSDQWGN+  GIDL  R     ++ AL +PL+T A GTK GK+  
Sbjct: 180 FLQLYRNYGCTLQQGGSDQWGNLTAGIDLIHRLEPDAQVHALATPLMTKADGTKFGKSEG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
           GAIWLN  MT+PY F+Q+W N DD DV  + + L+     E++ + K+  +      A++
Sbjct: 240 GAIWLNASMTTPYAFYQFWLNTDDRDVSRYLRILSFRSREELEELEKVTEERPQARTAQR 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLT 354
            +A E+TT+VHG +E      A+   F     +             +          ++ 
Sbjct: 300 ALAEELTTLVHGEDECRAVIAASKALFGQGELADLDAATLEAALYELPHVRADGFAPVVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+ + G   S + ARR +K     +NN  ++ E      +D      + +  GKKN    
Sbjct: 360 LLAETGLVASKSAARRTVKEGGAYVNNVKVTAEDAVPGPEDLLHGRWLVVRRGKKNLAAV 419

Query: 415 HLCG 418
            + G
Sbjct: 420 EITG 423


>gi|312139861|ref|YP_004007197.1| tyrosine-tRNA ligase tyrs [Rhodococcus equi 103S]
 gi|311889200|emb|CBH48514.1| tyrosine-tRNA ligase TyrS [Rhodococcus equi 103S]
          Length = 425

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/425 (35%), Positives = 228/425 (53%), Gaps = 13/425 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   
Sbjct: 1   MTENILDELTWRGLIAQSTDLDALRRETEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP      R M  +  + +  ++I+     F+ +    T A
Sbjct: 61  QRAGHRPIVLAGGATGMIGDPRDVG-ERVMNTADTVADWADRIRSQLERFVDFDESPTGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  W   +  ID LR+IG  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 120 VIENNANWTSKLTAIDFLRDIGKHFSVNVMLARDTVKRRLETD-GISYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           FV L +NY C LQ+GGSDQWGNII G+DL  +L    + A+T PL+T+A G K GK+   
Sbjct: 179 FVHLRRNYGCTLQVGGSDQWGNIIAGVDLNRKLDGESVHAMTVPLVTSADGKKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           G++WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  +     +  +  EA++
Sbjct: 239 GSLWLDPEMTSPYAWYQYFVNTGDADVVKYLRWFTFLTQEELAELEVATAERPQAREAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGL 352
            +A E+TT+VHG+   +    A+            D S  +  +   SI++        +
Sbjct: 299 RLAAEMTTLVHGQANTDAVELASKALFGRAELTDLDESTLAAALKEASIAEVAGDAPRTI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S   ARR +K     +NN  + ++    +  D      + +  G+KN  
Sbjct: 359 VDLLVASGLSESKGAARRAVKEGGAYVNNQRVESDDWTPESSDLLHGRWLVIRRGRKNFA 418

Query: 413 ICHLC 417
              + 
Sbjct: 419 GIKVI 423


>gi|256820458|ref|YP_003141737.1| tyrosyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582041|gb|ACU93176.1| tyrosyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 431

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 156/432 (36%), Positives = 227/432 (52%), Gaps = 24/432 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG I  I    E      +G+  AY+G+D TA SLH G+L  +M+L   Q
Sbjct: 1   MKNFIEELRWRGMIQDIMPETE--QHLMEGLRAAYVGFDPTADSLHIGNLVSVMMLRHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
             GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +       A
Sbjct: 59  NCGHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESQASNRA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
            ++NN  W+    ++  +R+IG   +VN M++ +SV+ R         +SF EF+Y +LQ
Sbjct: 119 ELVNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+
Sbjct: 179 GYDFLHLYREKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
             G +WL+ E TSPY F+QYW N  D D   + K  T L   EI+ +         +   
Sbjct: 239 EGGNVWLDPEKTSPYKFYQYWINTSDTDAERYIKIFTMLSKEEINSLIAQHTEAPHLRVL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +  +A E+T +VHGREE EKA  A+   F  S                   +P   IS  
Sbjct: 299 QNKLAEELTLLVHGREELEKAQKASQILFGNSTSADLRTLDEKTFLEVFDGVPQSEISAT 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +++ G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D      I 
Sbjct: 359 DIAGGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKV-GEDYQIGEKDLVDGKFIL 417

Query: 404 LSFGKKNHIICH 415
           L  GKKN+ I  
Sbjct: 418 LQRGKKNYFIVK 429


>gi|114569858|ref|YP_756538.1| tyrosyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|114340320|gb|ABI65600.1| tyrosyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 415

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 190/415 (45%), Positives = 267/415 (64%), Gaps = 2/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KS  +  L ERG+++Q ++   LD     GVVT YIG+D TA+SLH G L Q+M+L
Sbjct: 1   MSDYKSQLVRDLVERGYLNQATDIEGLDQAALDGVVTGYIGFDATATSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GHKPI LMGGGT+ IGDPS +D+SR M+  + I  NI+ I   F   ++ G G 
Sbjct: 61  RRIQQAGHKPIILMGGGTTKIGDPSGKDKSRSMLTDEAIDANIDGILQAFRPLVQIGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+++NN+ WL    YI+ LR+ G  F++NRM++F+SV+ RL REQ L+FLEFNYM+LQ
Sbjct: 121 TDAVLVNNDEWLSEFGYIEFLRKFGPHFTINRMMTFDSVKLRLDREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF+EL + Y C LQ+GG DQWGNII G++L  R+   +++  T+PL+TT+SG KMGKT
Sbjct: 181 AVDFLELNRRYGCTLQLGGGDQWGNIINGVELCRRVDQKEVYGFTTPLITTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +M S Y +WQ+WRN +DADV  F +  T LP++EI R+  L+G EIN+AK 
Sbjct: 241 ADGAVWLNADMRSAYEYWQFWRNTEDADVGRFLRLFTDLPLAEIARLEALEGAEINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A E T ++HG E A  A   A + F        +PT+     + S  + L++L V A 
Sbjct: 301 RLANEATGLLHGAEAASAAEATARQTFAQGGSGAALPTVEFEGLD-SGEVTLMSLFVAAE 359

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  E RRH+K+ A K+N+ ++++        D      IKLS GKK H +  
Sbjct: 360 LAASNGEMRRHIKAGAAKVNDQVLTDPFAMASADDVVDGA-IKLSIGKKRHALAK 413


>gi|319945777|ref|ZP_08020028.1| tyrosine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319748137|gb|EFW00380.1| tyrosine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 418

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/417 (35%), Positives = 223/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEDALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + +   +  I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVASIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELMRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N   TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+KI+A E
Sbjct: 241 NASKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +    + ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENLNIVELLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI IN   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYINGDRIQDLDYVLSDSDKLENELTVIRRGKKKYFVLT 417


>gi|229824686|ref|ZP_04450755.1| hypothetical protein GCWU000182_00034 [Abiotrophia defectiva ATCC
           49176]
 gi|229791015|gb|EEP27129.1| hypothetical protein GCWU000182_00034 [Abiotrophia defectiva ATCC
           49176]
          Length = 421

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 169/410 (41%), Positives = 247/410 (60%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 17  VYEELKARGLIAQVTNEEEISKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 76

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+LMGGGT +IGDPS R + R MM  + I+ N +  K     FI +G G   A+M+N
Sbjct: 77  NKPIALMGGGTGMIGDPSGRTDMRTMMTKETIEHNCKCFKKQMERFIDFGEG--KAIMVN 134

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+ LR+IG  FSVNRML+ E  + R+  E+ LSFLEFNYM++Q +DF  L
Sbjct: 135 NADWLLDLNYIEFLRDIGPHFSVNRMLAAECYKQRM--EKGLSFLEFNYMLMQGFDFYML 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R       A+T  LL  + G KMGKT +GA+WL
Sbjct: 193 YQKYGCNMEFGGDDQWSNMLAGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTANGAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T+PY+F+QYWRN+DD DV+   K LT LP+ EI  M   +G ++NEAK+I+A E+T
Sbjct: 253 DPEKTTPYDFYQYWRNVDDGDVIKCLKLLTFLPIEEILAMEAWEGAKLNEAKEILAFELT 312

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTN 366
            +VHG EEA KA +AA   F      ++MP+ +IS ++   G+  ++TL+ K+    + +
Sbjct: 313 KLVHGEEEANKAQSAAKALFAGGGSLENMPSFTISMEDARDGVFDIITLLHKSRLVATRS 372

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + +N+  +++     K ++    G + +  GKK      L
Sbjct: 373 EGRRAVEQGGVVVNDEKVTDFAATFKPEELQGEG-LIVRKGKKKFCKVTL 421


>gi|304404160|ref|ZP_07385822.1| tyrosyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304347138|gb|EFM12970.1| tyrosyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 428

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 227/421 (53%), Gaps = 18/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG +HQ+++   L     +  +T Y G+D TA SLH G L  ++ L   QK 
Sbjct: 12  DLLEDLEYRGLVHQVTHREGLHEKLQKEPITLYCGFDPTADSLHIGSLLPILCLMRFQKA 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS R   R +   + +      ++   S F+ + T    A ++
Sbjct: 72  GHNPIALVGGGTGLIGDPSGRTSERSLNTDETVASWTASLQRQLSRFLDFDTQANPAKLV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+  I  LR++G +F+VN ML+ +SV SRL     +SF EF+YMI+QAYDF  
Sbjct: 132 SNYDWLASMNIISFLRDVGKYFTVNYMLAKDSVDSRL--ANGISFTEFSYMIMQAYDFSV 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +DC LQ+GGSDQWGNI  G+DL  +L   + F LT PL+T + G K GK+ SGAIW
Sbjct: 190 LREQHDCALQIGGSDQWGNITAGLDLIGKLGGGESFGLTMPLVTKSDGKKFGKSESGAIW 249

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+   TS Y F+Q+W N DD+DV+ F K  T L    I  +        E   A++ +A 
Sbjct: 250 LDSSKTSVYTFYQFWINTDDSDVIKFLKYFTFLSRERIAELEAELQAHPEKRAAQRELAR 309

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T +VHG +    A       F   +            + MPT+ ++ +E++    L+ 
Sbjct: 310 EVTRLVHGADALASAEKITEALFSGDVTQLNEAELVEALEGMPTVVLADEEIA----LMD 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L++ A  A S  +AR+ ++S A+ IN    +     +  +       + L  GKKN+ + 
Sbjct: 366 LLIAAKAAPSKRQARQDIESGAVYINGERNTAVDAVLTKEQRLHNQYLVLRRGKKNYYLV 425

Query: 415 H 415
            
Sbjct: 426 R 426


>gi|290961478|ref|YP_003492660.1| tyrosyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260651004|emb|CBG74122.1| tyrosyl-tRNA synthetase (EC 6.1.1.1) [Streptomyces scabiei 87.22]
          Length = 422

 Score =  371 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/423 (32%), Positives = 219/423 (51%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFSLSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T +IGDP      R +   + +   + +++     F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGLIGDPRP-TAERTLNDPETVAGWVGRLRAQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ EQ +S+ EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTEGLSAIEFLRDIGKHFRVNKMLAKDSVARRLESEQGISYTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C LQ GGSDQWGN+  G+DL  R++   +  AL +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRYGCTLQQGGSDQWGNLTAGLDLIHRMEPGVEAHALATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKII 302
           A+WL+ EMTSPY F+Q+W N+DD D+  + + L+    +E++ + +  + +    A +  
Sbjct: 239 AVWLDPEMTSPYAFYQFWLNVDDRDISGYMRILSFRSRAELEELERQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSRGMGLLTL 355
             E  T +    E   A  AA            +           +   +V     ++ L
Sbjct: 299 LAEELTTLVHGAEQTAAVIAASRALFGQGELAELDERTLAAALSELPHVKVPEPAPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +AG   S +  RR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 LAEAGLVPSKSAGRRTVKEGGAYVNNVKVTAEDAVPAAEDLIHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|289167043|ref|YP_003445310.1| tyrosyl-tRNA synthetase 1 [Streptococcus mitis B6]
 gi|288906608|emb|CBJ21441.1| tyrosyl-tRNA synthetase 1 [Streptococcus mitis B6]
          Length = 418

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/417 (35%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +    + ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENLNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 AGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLNDADKLENELTVIRRGKKKYFVLT 417


>gi|262091789|gb|ACY25377.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 421

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 233/424 (54%), Gaps = 17/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG + Q ++ + L     +   T Y+G+D TA SLHAG+L  L++L   Q  
Sbjct: 2   NLIEDLRWRGLLAQSTDEKALLEAL-KKPTTLYVGFDPTAPSLHAGNLVVLLVLRRFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T ++GDPS ++E R +  S+ ++  + +I+   S+F+ +   K  A ++
Sbjct: 61  GHNPIALVGGATGLVGDPSGKNEERTLNSSEIVEAWVNRIRQQVSAFLDFDAPKNPAQVV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I+ LR+IG  FSVN+MLS +SV +RL+    +S+ EF+Y +LQ+YDF+E
Sbjct: 121 NNLDWTSPLSAIEFLRDIGKHFSVNQMLSKDSVSARLEGG-GISYTEFSYQVLQSYDFLE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +  +C LQ+GGSDQWGNI+ G+DL  R++     ALT PLL  A GTK GKT  G++W
Sbjct: 180 LYRRNNCTLQVGGSDQWGNIVAGLDLIRRVEQGSGHALTVPLLMKADGTKFGKTAGGSVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+ EMTSPY F+Q+W N DD DV++F K  +     EI  + K   +     EA + +A 
Sbjct: 240 LDPEMTSPYAFFQFWLNSDDKDVINFLKVFSFKSHEEITALEKSHNENPGLREAHRALAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+T++VH  E  ++   AA   F     S+            +P  ++S  +       +
Sbjct: 300 ELTSLVHSEETTQRVEAAARALFGQGELSELDEVTLASALAELPRTTVSSKD--EIPTWV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+   G   S + ARR +K     +NN  IS E  +    DF       L  GK++   
Sbjct: 358 DLLAATGVVDSKSAARRIVKEGGGYLNNEKISGEDFRPSKSDFLCGKYAVLRKGKRDLAA 417

Query: 414 CHLC 417
             L 
Sbjct: 418 VELV 421


>gi|301056168|ref|YP_003794379.1| tyrosyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378337|gb|ADK07241.1| tyrosyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 418

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 228/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  FS+N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFSLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|255264506|ref|ZP_05343848.1| tyrosyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106841|gb|EET49515.1| tyrosyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 417

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 212/413 (51%), Positives = 292/413 (70%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFITVMIERGFLADCTDYQGLDDAFAAGVVPAYIGFDATAQSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           K G KPI+LMGGGT+ +GDPSFR + R ++ +++I  NI  IK +F+++I Y +G  T A
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRADERPLLTTKQINANIAGIKQVFAAYIDYESGDDTQA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLEDLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCLLQLGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN EM +PY FWQ+WRN +D DV  F K  T LP++E DR+  L+G +INEAK ++A
Sbjct: 246 AIWLNAEMCAPYEFWQFWRNTNDDDVGRFLKLYTDLPIAECDRLGALEGSDINEAKIVLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG++ A  A   A E F+       +PT++++ D+VS G+ ++ LIV++G A 
Sbjct: 306 NEVTKLLHGKDAAAAAEATAREVFEKGGVGDDLPTLTLTADDVSDGISVVQLIVRSGLAG 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  K+N+  +++  + ++  D  +   IKLS GKK H +  L
Sbjct: 366 SGKEAKRLIADNGAKMNDEALTDAGMVLQAADLVTP--IKLSAGKKRHALVQL 416


>gi|97202276|sp|Q47N93|SYY_THEFY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 432

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/427 (35%), Positives = 238/427 (55%), Gaps = 23/427 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG I Q ++  +L    + G VT Y G+D TA SLH GHLTQ + L   Q
Sbjct: 1   MTDIIDDLQWRGLIAQTTDLDDLRKALADGPVTLYCGFDPTAGSLHVGHLTQALTLARFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-----GTG 119
           + GH+PI+L+GG T +IGDP   +  R +   + I++ +  +K   SSF+++        
Sbjct: 61  RAGHRPIALVGGATGMIGDPKP-NAERTLNSPETIRQWVGNLKRQLSSFLEFTPEGAEPK 119

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            TDAL+L+N  WL  +  I LLR+IG  FS+N+ML+ E+V++RL     +S+ EF+Y++L
Sbjct: 120 PTDALLLDNAEWLGKLTAIGLLRDIGKHFSINQMLARETVKTRL-EGAGMSYTEFSYVLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGT 235
           Q+YD+VEL + + C LQ+GGSDQWGNI  G+DL  R+          ALT+ LLT A GT
Sbjct: 179 QSYDYVELYRRHGCTLQIGGSDQWGNITAGLDLIRRMEGNEPHGPAHALTTTLLTKADGT 238

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK 293
           K GKT SGA+WL+ E+TSPY F+Q+W N DD D+  + +  +     EI+ + +  ++  
Sbjct: 239 KFGKTESGAVWLDPELTSPYAFYQFWFNSDDRDIPRYLRIFSFRSREEIEELEQKTIERP 298

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVS 347
               A++ +A E+TT+VHG +E      A+   F     +   P         +   E+S
Sbjct: 299 AERAAQRALAEELTTLVHGEQECRNVIEASKALFGHGTLADLNPDTLGAALKEVPHVELS 358

Query: 348 RGM----GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             +     L+ L    G   S + ARR ++     +NN+ +++ + ++   D      + 
Sbjct: 359 GTVRELPPLVDLFASTGLVPSKSAARRTIQEGGAYLNNAKVTDIEARVSEADLLHGRYLV 418

Query: 404 LSFGKKN 410
           L  GK+N
Sbjct: 419 LRRGKRN 425


>gi|72162442|ref|YP_290099.1| tyrosyl-tRNA synthetase [Thermobifida fusca YX]
 gi|71916174|gb|AAZ56076.1| tyrosyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 447

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/427 (35%), Positives = 238/427 (55%), Gaps = 23/427 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG I Q ++  +L    + G VT Y G+D TA SLH GHLTQ + L   Q
Sbjct: 16  MTDIIDDLQWRGLIAQTTDLDDLRKALADGPVTLYCGFDPTAGSLHVGHLTQALTLARFQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-----GTG 119
           + GH+PI+L+GG T +IGDP   +  R +   + I++ +  +K   SSF+++        
Sbjct: 76  RAGHRPIALVGGATGMIGDPKP-NAERTLNSPETIRQWVGNLKRQLSSFLEFTPEGAEPK 134

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            TDAL+L+N  WL  +  I LLR+IG  FS+N+ML+ E+V++RL     +S+ EF+Y++L
Sbjct: 135 PTDALLLDNAEWLGKLTAIGLLRDIGKHFSINQMLARETVKTRL-EGAGMSYTEFSYVLL 193

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGT 235
           Q+YD+VEL + + C LQ+GGSDQWGNI  G+DL  R+          ALT+ LLT A GT
Sbjct: 194 QSYDYVELYRRHGCTLQIGGSDQWGNITAGLDLIRRMEGNEPHGPAHALTTTLLTKADGT 253

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK 293
           K GKT SGA+WL+ E+TSPY F+Q+W N DD D+  + +  +     EI+ + +  ++  
Sbjct: 254 KFGKTESGAVWLDPELTSPYAFYQFWFNSDDRDIPRYLRIFSFRSREEIEELEQKTIERP 313

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVS 347
               A++ +A E+TT+VHG +E      A+   F     +   P         +   E+S
Sbjct: 314 AERAAQRALAEELTTLVHGEQECRNVIEASKALFGHGTLADLNPDTLGAALKEVPHVELS 373

Query: 348 RGM----GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             +     L+ L    G   S + ARR ++     +NN+ +++ + ++   D      + 
Sbjct: 374 GTVRELPPLVDLFASTGLVPSKSAARRTIQEGGAYLNNAKVTDIEARVSEADLLHGRYLV 433

Query: 404 LSFGKKN 410
           L  GK+N
Sbjct: 434 LRRGKRN 440


>gi|171778939|ref|ZP_02920001.1| hypothetical protein STRINF_00862 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282585|gb|EDT48009.1| hypothetical protein STRINF_00862 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 418

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 227/421 (53%), Gaps = 17/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVVKIQNQLSRFLDFENGDNKAVMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFGNISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELIRRKADKTGHVMTVPLITDATGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K     +    A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKEFNAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+ T+VHG E  ++A     + F  +I S           ++P  ++S D+      ++ 
Sbjct: 300 EVVTLVHGEEAYKEAIKITEQLFAGNIKSLSAKELKQGLNNVPNYAVSDDD---NRNIVE 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 357 MLVAAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDDDKIDNELTVIRRGKKKYFVL 416

Query: 415 H 415
            
Sbjct: 417 T 417


>gi|255994648|ref|ZP_05427783.1| tyrosine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993361|gb|EEU03450.1| tyrosine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 174/410 (42%), Positives = 256/410 (62%), Gaps = 5/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERGFI Q ++  E+  L +   +  YIG+D TA SLH GH  Q++++ ++QK 
Sbjct: 13  NVFDVLKERGFIEQTTHEDEIRELLANQKIKFYIGFDPTADSLHVGHFMQIIIMMYMQKF 72

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT ++GDPS R + R+MM  + ++E+  K + +F  FI +      A+ +
Sbjct: 73  GHTPIVLVGGGTGMVGDPSGRTDMRKMMTVETVREHCRKFEKLFERFIDF--SDNKAIAI 130

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YID LREIGS FSVNRMLS E  + RL  ++ LSFLEFNYM++QAYDF+ 
Sbjct: 131 NNADWLMNLNYIDFLREIGSQFSVNRMLSAECFKQRL--KKGLSFLEFNYMLMQAYDFLV 188

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +N DC++Q GG DQW NI+ G+DL  R +  ++F +T  LLT + G KMGKT SGA+W
Sbjct: 189 LYRNLDCKMQFGGDDQWSNILAGVDLVRRKEQGQVFGMTFSLLTNSQGKKMGKTASGALW 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TS Y F+QYWRN++D DV    K LT LP+ EI+ M   +G+ IN+AK+++A E+
Sbjct: 249 LDANKTSAYEFYQYWRNVEDEDVKKCLKMLTFLPIEEIEAMTCEKGENINKAKEVLAYEV 308

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG E A+   TA    F      +++PT  I++DE   G+GL+ L+ +A   +S +
Sbjct: 309 TKLVHGEEVAKNTETAVKAAFSGEGDLENLPTTVITEDEAKSGIGLIDLMKRAELISSNS 368

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E  R +K   + I +  + + K  I   DF     + +  GKK +    +
Sbjct: 369 EGFRLVKQGGVSIGDVKVEDGKRIITEGDFSDNS-LVIKKGKKVYHRIVI 417


>gi|47565074|ref|ZP_00236117.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557860|gb|EAL16185.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERAAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|296269994|ref|YP_003652626.1| tyrosyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092781|gb|ADG88733.1| tyrosyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 421

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/421 (36%), Positives = 230/421 (54%), Gaps = 10/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  R  + Q ++   L    ++G ++ Y G+D TA SLH G+L  L++L   Q
Sbjct: 1   MTDILDELHWRDIVAQTTDANALRKALAEGPISVYAGFDPTAPSLHVGNLATLLILTRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI L+GG T +IGDPS R   R +   + + E + +I+     F+ +  G   AL
Sbjct: 61  RAGHRPIGLVGGATGLIGDPSGRSTERALNPVEVVAEWVTRIRAQVEKFLSFDEGPNSAL 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  W   +  ID LR+IG  F VNRML+ ESV +RL+ E  LS+ EF+Y ILQA D+
Sbjct: 121 LVSNLEWTEKLSVIDFLRDIGKHFPVNRMLARESVAARLEGE-GLSYTEFSYQILQANDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ+GGSDQWGNI  G+DL  R++   +  LT  L+T A GTK GKT  GA
Sbjct: 180 LELYRRYGCTLQVGGSDQWGNITAGVDLIRRVEGAHVHGLTGKLITKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+  +TSPY F+Q+W N DD DVV   K  T     EI+ + K   +     EA++ +
Sbjct: 240 IWLDPALTSPYAFYQFWLNADDRDVVRLLKVFTFRTREEIEELEKAVAERPAAREAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSR------GMGLLTL 355
           A ++T +VHGREE E+   A+   F      +    T+  + +EV +      G   + L
Sbjct: 300 AEDVTALVHGREELERVVAASRALFGHGTLQELDERTLEAALNEVPKAKVPALGAPYVDL 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  +G   S + ARR ++     +NN  +++E       D      + L  GKK      
Sbjct: 360 LAASGIVESKSAARRAVREGGAYLNNVKVTDEDYVPTADDLLHGRFLVLRRGKKTIGGVE 419

Query: 416 L 416
           +
Sbjct: 420 V 420


>gi|196043850|ref|ZP_03111087.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196025186|gb|EDX63856.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|225174287|ref|ZP_03728286.1| tyrosyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225170072|gb|EEG78867.1| tyrosyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 407

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 171/407 (42%), Positives = 245/407 (60%), Gaps = 7/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELIARGLIAQVTDEEEIKELVNSGQAIFYIGFDPTADSLHVGHFMALSLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT+ IGDPS R + R MM  + IQ N E  K     FI++G     A+M+N
Sbjct: 63  NKPIVLLGGGTAYIGDPSGRTDLRNMMTPEIIQHNSECFKKQMEKFIEFGDD--KAIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLELNYIDMLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFFYL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL T+ G KMGKT  GA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGEDAYAMTITLLMTSEGNKMGKTAKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T P+ F+QYWRN+ DADV+   + LT LP+ EI+ M K +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTPPFEFFQYWRNVADADVLKCIRMLTFLPLEEIEAMDKWEGSQLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            ++HG EEA+KA +A+   F       +MPT  I+ ++++ G +G+L L++  G   S +
Sbjct: 299 KLIHGEEEAKKAKSASHALFAGGTDDSNMPTTEITTEQLTDGAIGILDLLLACGLTPSKS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           EARR ++   + + +  + +    I  +   +   IK+  GKK +  
Sbjct: 359 EARRLVQQGGVFVEDEKVESIDTNITAEQLKNG--IKIRKGKKTYHK 403


>gi|228941839|ref|ZP_04104386.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974764|ref|ZP_04135330.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981359|ref|ZP_04141659.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis Bt407]
 gi|229163655|ref|ZP_04291603.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus R309803]
 gi|228619792|gb|EEK76670.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus R309803]
 gi|228778559|gb|EEM26826.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis Bt407]
 gi|228785167|gb|EEM33180.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818051|gb|EEM64129.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942444|gb|AEA18340.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|229019888|ref|ZP_04176686.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1273]
 gi|229026114|ref|ZP_04182491.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1272]
 gi|229032310|ref|ZP_04188283.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1271]
 gi|229175374|ref|ZP_04302889.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus MM3]
 gi|228608206|gb|EEK65513.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus MM3]
 gi|228729090|gb|EEL80093.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1271]
 gi|228735192|gb|EEL85810.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1272]
 gi|228741408|gb|EEL91610.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1273]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|294101420|ref|YP_003553278.1| tyrosyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616400|gb|ADE56554.1| tyrosyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 427

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/428 (37%), Positives = 241/428 (56%), Gaps = 19/428 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +    L ERG +   S+P ELD    +   +TAYIG+D TA SLH GHL  +M L WL
Sbjct: 1   MVNAFRALQERGLVEWCSHPEELDEFFEKEEMITAYIGFDPTADSLHVGHLIPIMTLSWL 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GGGT +IGDPS + + R ++  + ++ENI  ++     F+ +  GK  A
Sbjct: 61  QRMGHRPICLAGGGTGMIGDPSGKSKERNLLSPEAVRENIRGVRNQLEHFMNFNCGKNSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
           L++NN  WL  I ++D LRE+G FF++N M++ E V+SR    E+S+S+ EF+Y +LQAY
Sbjct: 121 LIVNNYDWLKDISFLDFLREVGKFFTINYMVNKEHVKSRLNDPEKSISYTEFSYTLLQAY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L + Y C++QMGG+DQ GNI+ GIDL  + K  + +  T+PLL T+SGTK GKT  
Sbjct: 181 DFMHLLEKYGCKIQMGGNDQQGNIVSGIDLIRKRKGDQAYGWTNPLLLTSSGTKFGKTEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N +D  V    K  T LP+ EI+ +        E  EA+K
Sbjct: 241 GAVWLDPKRTSPYRFYQFWINTEDEMVEKLLKFFTFLPLEEIEEIMSKHLAAPEKREAQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS------------QHMPTISISKDEVSR 348
            +A E+T++VH    A+  A A+   F   I              + +P  +IS      
Sbjct: 301 RLAWEVTSLVHSPHAADTVARASEILFGGEITHEDMSEEMMEMLAEEVPYGTISTAL--- 357

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              L+ ++V      S  EARR ++   + +N   I +E   I+        ++ +  GK
Sbjct: 358 PRSLVDVLVSVEACKSKGEARRLIRGGGVYVNGDRIEDENGTIEKTLLIGGRHLFVRLGK 417

Query: 409 KNHIICHL 416
           K   +  +
Sbjct: 418 KRFNLIEI 425


>gi|293364670|ref|ZP_06611391.1| tyrosine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702926|ref|ZP_07639874.1| tyrosyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316928|gb|EFE57360.1| tyrosine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623606|gb|EFO02595.1| tyrosyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|229118149|ref|ZP_04247508.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-3]
 gi|228665372|gb|EEL20855.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-3]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|301795027|emb|CBW37492.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKVFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|229105287|ref|ZP_04235936.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-28]
 gi|228678213|gb|EEL32441.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-28]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|270291799|ref|ZP_06198015.1| tyrosine--tRNA ligase [Streptococcus sp. M143]
 gi|270279884|gb|EFA25725.1| tyrosine--tRNA ligase [Streptococcus sp. M143]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N + I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGNRIQDLDYVLSDADKLDNELTVIRRGKKKYFVLT 417


>gi|229081915|ref|ZP_04214407.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-2]
 gi|229192885|ref|ZP_04319843.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 10876]
 gi|228590724|gb|EEK48585.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 10876]
 gi|228701503|gb|EEL53997.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-2]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|296102665|ref|YP_003612811.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057124|gb|ADF61862.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 409

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/405 (36%), Positives = 219/405 (54%), Gaps = 9/405 (2%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q  GHKP++L+GG T
Sbjct: 2   AQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQMAGHKPVALVGGAT 61

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
            +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+  NN  W  S+  +
Sbjct: 62  GLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFNCGDNAAIAANNYDWFGSMNVL 121

Query: 139 DLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF  L K +   LQ+
Sbjct: 122 TFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVCLQI 181

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+WL+ + TSPY F
Sbjct: 182 GGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKF 241

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREE 315
           +Q+W N  DADV  F K  T + +  I+          +   A+ ++A E+T +VHG E 
Sbjct: 242 YQFWINTADADVYRFLKFFTFMDIETINALEEEDKNSGKAPRAQYVLADEVTKLVHGEEG 301

Query: 316 AEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
              A       F+           + +    +   E+ +G  L+  +V +    S  +AR
Sbjct: 302 LAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQAR 361

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + + SNAI IN    ++ +      D        L  GKKN+ + 
Sbjct: 362 KTIASNAITINGEKQADPEYTFADSDRLYGRYTLLRRGKKNYCLV 406


>gi|229013863|ref|ZP_04170991.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides DSM 2048]
 gi|228747532|gb|EEL97407.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides DSM 2048]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 227/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++G     A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFGNVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|229087219|ref|ZP_04219366.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-44]
 gi|228696100|gb|EEL48938.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-44]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERSAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|228967760|ref|ZP_04128776.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791914|gb|EEM39500.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEAFEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|196040849|ref|ZP_03108147.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|217962146|ref|YP_002340716.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141395|ref|ZP_04269933.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST26]
 gi|229158266|ref|ZP_04286333.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 4342]
 gi|300118900|ref|ZP_07056613.1| tyrosyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|196028303|gb|EDX66912.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|217064110|gb|ACJ78360.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228625224|gb|EEK81984.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 4342]
 gi|228642176|gb|EEK98469.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST26]
 gi|298723745|gb|EFI64474.1| tyrosyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|324328556|gb|ADY23816.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|30264732|ref|NP_847109.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530205|ref|YP_021554.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187550|ref|YP_030803.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481693|ref|YP_038706.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52140844|ref|YP_085985.1| tyrosyl-tRNA synthetase [Bacillus cereus E33L]
 gi|118479801|ref|YP_896952.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165869597|ref|ZP_02214255.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167634052|ref|ZP_02392375.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167638031|ref|ZP_02396309.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170685688|ref|ZP_02876911.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|177651320|ref|ZP_02934151.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196033099|ref|ZP_03100512.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218905888|ref|YP_002453722.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|222098132|ref|YP_002532189.1| tyrosyl-tRNA synthetase [Bacillus cereus Q1]
 gi|225866644|ref|YP_002752022.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817451|ref|YP_002817460.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917309|ref|ZP_04080864.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929712|ref|ZP_04092729.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935970|ref|ZP_04098780.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948407|ref|ZP_04110690.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228987909|ref|ZP_04148017.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229093761|ref|ZP_04224860.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-42]
 gi|229124228|ref|ZP_04253420.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 95/8201]
 gi|229186921|ref|ZP_04314076.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BGSC 6E1]
 gi|229198819|ref|ZP_04325513.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1293]
 gi|229604566|ref|YP_002868940.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687471|ref|ZP_05151327.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725033|ref|ZP_05186816.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254741808|ref|ZP_05199495.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754594|ref|ZP_05206629.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757426|ref|ZP_05209453.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81394595|sp|Q6HCM0|SYY1_BACHK RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|81685883|sp|Q633D2|SYY1_BACCZ RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|81714900|sp|Q81KS9|SYY1_BACAN RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|30259407|gb|AAP28595.1| tyrosine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505353|gb|AAT34029.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181477|gb|AAT56853.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333249|gb|AAT63895.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974313|gb|AAU15863.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|118419026|gb|ABK87445.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164714426|gb|EDR19945.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167513848|gb|EDR89216.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167530853|gb|EDR93555.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170670152|gb|EDT20892.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083146|gb|EDT68208.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|195994528|gb|EDX58483.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218538126|gb|ACK90524.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|221242190|gb|ACM14900.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           Q1]
 gi|225788112|gb|ACO28329.1| tyrosine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227004662|gb|ACP14405.1| tyrosine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228584655|gb|EEK42779.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1293]
 gi|228596658|gb|EEK54323.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BGSC 6E1]
 gi|228659530|gb|EEL15178.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 95/8201]
 gi|228689646|gb|EEL43454.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-42]
 gi|228771832|gb|EEM20290.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228811394|gb|EEM57732.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823738|gb|EEM69560.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829891|gb|EEM75511.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842350|gb|EEM87443.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268974|gb|ACQ50611.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 227/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|52786843|ref|YP_092672.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|163119602|ref|YP_080258.2| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647372|ref|ZP_08001594.1| tyrosyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
 gi|52349345|gb|AAU41979.1| TyrS [Bacillus licheniformis ATCC 14580]
 gi|145903112|gb|AAU24620.2| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|317390719|gb|EFV71524.1| tyrosyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
          Length = 422

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/422 (36%), Positives = 232/422 (54%), Gaps = 12/422 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  LS RG I Q ++   L  L  +  ++ Y G+D TA SLH GHL  +++L   
Sbjct: 1   MMTHILDDLSFRGLIQQQTDEAGLRELLDKEKISLYSGFDPTADSLHIGHLLPILMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI+L+GG T +IGDPS +   R +   + ++E  +KIK   S F+ +   +  A
Sbjct: 61  QLAGHRPIALVGGATGLIGDPSGKKAERTLNNEEIVREWSQKIKNQLSRFLDFEAEENPA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+ D
Sbjct: 121 IMANNYDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSLD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLS 242
           F+ L +N +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  
Sbjct: 179 FLNLYRNQECKLQIGGSDQWGNITSGLELIRKSEENAKAFGLTIPLVTKADGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           GAIWL+KE TS Y F+Q+W N DD DVV + K  T L   EI+          E  EA+K
Sbjct: 239 GAIWLDKEKTSAYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEDLAEKTETAPEKREAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLL 353
            +A E+T +VHGRE  E+A   +   F   I       + +        + E +  + L+
Sbjct: 299 RLAEEVTVLVHGREAFEQAVNISKALFSGDIKQLTAEEVKVGFKGVPSLEVEKADELPLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V++  + S  +AR  + + A+ +N    ++    +   D        +  GKK + +
Sbjct: 359 EILVQSKLSPSKRQAREDITNGAVYVNGERRTDVADVLTADDRIEGQFTVIRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 LT 420


>gi|170705583|ref|ZP_02896047.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170129708|gb|EDS98571.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
          Length = 418

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 227/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           +  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 SYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|295093737|emb|CBK82828.1| tyrosyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 406

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/408 (41%), Positives = 251/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQTTDEDEIRDLVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +      AL++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSKFIDFSED--KALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVDVLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYVL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGSQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F   +    MP+++++ D+   G + +++++VK+G  TS N
Sbjct: 299 KLVHGEEEAAKAQESARALFSKGVA-ADMPSVTLAADDFKDGAIDIVSVLVKSGLVTSRN 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E RR ++   + ++   I++ +  I  + FD  G + +  GKKN    
Sbjct: 358 EGRRAVEQGGVAVDGEKITDVQTTILQEKFDGEG-VVVRRGKKNFRKV 404


>gi|262193438|ref|YP_003264647.1| tyrosyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262076785|gb|ACY12754.1| tyrosyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 432

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/429 (35%), Positives = 232/429 (54%), Gaps = 15/429 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  +  +  L  R  +  +S+  EL  L     ++ Y GYD TA+SLH G+L   ++L
Sbjct: 1   MSSKMT-IIDELETRHLLQDVSHREELGELLQGEAISVYAGYDPTATSLHVGNLIPTIIL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ G +PI+L+GG T +IGDP+ + + R ++    +Q N+  I+     F  +    
Sbjct: 60  ARLQRIGCRPIALVGGATGMIGDPTGKSDERNLLDEDTLQANVAAIRAQLGRFFDFDDSA 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
           T A ++NN  W   I +I  LR+IG   +VN M + +SVRSRL+     +S+ EF+YM+L
Sbjct: 120 TGAKLVNNLDWFRDIGFIPFLRDIGKLLTVNYMTAKDSVRSRLEDRATGISYTEFSYMLL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDFV LAK + CRLQ+GGSDQWGNI  GI+L  +L    ++ LT PLL  +SG KMGK
Sbjct: 180 QAYDFVHLAKEHGCRLQVGGSDQWGNITAGIELQRKLGRESVYGLTGPLLLDSSGEKMGK 239

Query: 240 TLS-GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           T S   IWL+ E TSPY F+QYW N  D DV    +  +   + EID    A  +  +  
Sbjct: 240 TASGMRIWLDPERTSPYAFYQYWLNTPDDDVARLLRVFSWRSLDEIDELVRAHGEAPQKR 299

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEV 346
             +  +A ++T  VHG E    A  A+   F  S+ +            +PT S+ + ++
Sbjct: 300 LGQSALAEDLTDWVHGEEAKRNALAASQVMFGGSLENLNDAALQPLTADLPTTSLPRQQL 359

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             G+ LL L+ +   A S   ARR ++   + +NN  +++    +  +D  +   + L  
Sbjct: 360 ESGIPLLELLAQTKLAASKGAARRLVQGGGVYVNNIRVADVNKTLLPEDLGTETIMILRA 419

Query: 407 GKKNHIICH 415
           GKKN+ +  
Sbjct: 420 GKKNYHLVQ 428


>gi|325962889|ref|YP_004240795.1| tyrosyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468976|gb|ADX72661.1| tyrosyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 438

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 227/423 (53%), Gaps = 19/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++  EL+ L + G VT Y G+D TA SLH G+L QL+++  LQ  
Sbjct: 19  NIWQELKWRGLVHVSTDEAELEKLLAGGPVTYYCGFDPTAPSLHLGNLVQLLVMRRLQLA 78

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDP      R +     + E +  ++     F+ +  G   A M+
Sbjct: 79  GHKPLGLVGGSTGMIGDPRP-TAERTLNTKDTVAEWVGYLQAQVRRFLSFE-GDNAARMV 136

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ  D+++
Sbjct: 137 NNLDWTAPLSAIDFLRDVGKHFRVGTMLRKDAVASRLNSDEGISYTEFSYQILQGMDYLQ 196

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+T A GTK GK+   AIW
Sbjct: 197 LYRDYGCMLQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLITNADGTKFGKSEGNAIW 256

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  DADVV+  K  T L  +EID    A  +     E ++ +A 
Sbjct: 257 LDAGMCSPYAFYQFWLNTADADVVNRLKVFTFLTRAEIDELAAAVAERPFAREGQRKLAY 316

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-----------HSQHMPTISISKDEVSRGMGLL 353
           E+T++VHG E  EK   A+   F                +  +P+ ++  DE    MG++
Sbjct: 317 EVTSLVHGVEATEKVIAASAALFGNGDLTALDKTTLQAATSELPSATVQVDE----MGIV 372

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +G + S + ARR +      +NN  +S+ +  I   +      + L  GKKN   
Sbjct: 373 DLLVASGLSESKSAARRTVGEGGAYVNNEKVSDPEAVISESELLHGQYLLLRRGKKNLAT 432

Query: 414 CHL 416
             +
Sbjct: 433 VEV 435


>gi|294501547|ref|YP_003565247.1| tyrosyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351484|gb|ADE71813.1| tyrosyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 419

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/418 (38%), Positives = 240/418 (57%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++ + L  L S+  V  Y G+D TA SLH GH+  +++L   Q+ 
Sbjct: 2   DILQDLEFRGLINQQTDEKGLSELLSKESVRLYCGFDPTADSLHIGHMLPVLILRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +   + +    E+IKG  S F+ +  G+  A++ 
Sbjct: 62  GHQPIALVGGGTGLIGDPSGKKAERTLNEKETVAMFSERIKGQLSRFLDFEEGENAAVIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR+IG  F +N M++ +SV+SR+  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWIGSLDVITFLRDIGKNFGINYMMAKDSVQSRI--ESGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L + Y+C+LQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GAI
Sbjct: 180 LYQTYNCKLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTVPLVTKADGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    +  E  EA+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSHEEINELAASAKEAPEKREAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
             +TT+VHG E  E+A   +   F  SI       I     +V         +GL+ L+V
Sbjct: 300 AAMTTLVHGEEALEQAIRISQALFSGSISELTAEEIKQGFKDVPSYTHTGENIGLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N     + +  +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDISNGAIYLNGEREQDLQKTVGAEDRIEGQFTVIRRGKKKYTLIQ 417


>gi|42783842|ref|NP_981089.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81408860|sp|Q72Z73|SYY1_BACC1 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|42739772|gb|AAS43697.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K + LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAYGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|254736771|ref|ZP_05194477.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 227/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPFVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|326336235|ref|ZP_08202407.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691744|gb|EGD33711.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 432

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/433 (34%), Positives = 226/433 (52%), Gaps = 24/433 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L   Q
Sbjct: 1   MKNFVEELRWRGMIQDIMPETE--EHLLEGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
             GHKP +++GG T +IGDPS +   R ++  + +  NIE IK   + F+ +  T    A
Sbjct: 59  DCGHKPYAVIGGATGMIGDPSGKSAERNLLTKETLAHNIEGIKKQLAKFLDFESTAPNRA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
            ++NN  W   + ++  +R+IG   +VN M++ +SV+ R         +SF EF+Y +LQ
Sbjct: 119 ELVNNYDWTKDVSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            +D++ L +     LQMGGSDQWGNI  G +L  R  + K +ALT PL+T A GTK GK+
Sbjct: 179 GFDYLHLFQEKGVTLQMGGSDQWGNITTGTELIRRKVSGKAYALTCPLITKADGTKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
             G +WL+ E TSPY F+QYW N  D D   + K  T LP  EI+ +  +          
Sbjct: 239 EGGNVWLDPEKTSPYKFYQYWINTSDVDAERYIKIFTMLPKGEIETLIMVHREAPHQRIL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +  +A E+T +VHG+EE E A  A+   F  +                   +P   IS  
Sbjct: 299 QSKLAEELTILVHGKEELENAIRASQILFGNTTSEDLKKLDSQTLLEIFDGVPQAEISLT 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++ +G+ ++  +  K GF  S +EARR L  N+I +N   ++ E   +  +D  +   I 
Sbjct: 359 DLKKGLDMIGALSAKTGFIKSNSEARRALGENSISVNKEKVT-EDYSLSEKDLLNNQFIL 417

Query: 404 LSFGKKNHIICHL 416
           L  GKKN+ +  +
Sbjct: 418 LQRGKKNYFLIRI 430


>gi|306826301|ref|ZP_07459635.1| tyrosine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431577|gb|EFM34559.1| tyrosine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS--RGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +      +   +V       ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|296505129|ref|YP_003666829.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296326181|gb|ADH09109.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K ++ 
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALSA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|271967347|ref|YP_003341543.1| tyrosine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270510522|gb|ACZ88800.1| Tyrosine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 422

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 157/421 (37%), Positives = 228/421 (54%), Gaps = 10/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  R  I Q ++   L    ++G +T Y G+D TA SLHAG+L  L++L   Q
Sbjct: 1   MTDILDELEWRDVIAQTTDADALRTALAEGPITVYGGFDPTAPSLHAGNLATLLILTRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI L+GG T +IGDPS R   R +  S+ + E + +I+     F+ +  G T A 
Sbjct: 61  RAGHRPIGLVGGATGLIGDPSGRSTERSLNSSEVVAEWVARIRVQVERFLSFDDGPTGAT 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  W   +  ID LR++G  F VNRML+ ESV +RL  +  LS+ EF+Y ILQA D+
Sbjct: 121 LVSNLDWTSEMSAIDFLRDVGKHFPVNRMLARESVSARLGGD-GLSYTEFSYQILQANDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQ+GGSDQWGNI  G+DL  R++     ALT  L+T A GTK GKT  GA
Sbjct: 180 LELYRRHGCTLQLGGSDQWGNITAGVDLIRRVEGAHTHALTGKLITKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+  +TSPY F+QYW N DD DVV F K  T     EI  + K         EA++ +
Sbjct: 240 IWLDPALTSPYAFYQYWLNADDRDVVRFLKVFTFRTQDEIAELEKAVADRPAAREAQRTL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSR-GMGLLTL 355
           A ++TT+VHG +E  +   A+   F      +            + + EV   G   + L
Sbjct: 300 AEDVTTLVHGADELARVVAASRALFGQGSLEELDARTLGSALAEVPRAEVPALGASFVDL 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + ++G   S + ARR +K     +NN  I++E       D      + L  GK++     
Sbjct: 360 LAESGLVESKSAARRAVKEGGAYLNNVKITDEAYVPSADDLLHGRFLVLRRGKRSIGGVE 419

Query: 416 L 416
           +
Sbjct: 420 V 420


>gi|148984396|ref|ZP_01817684.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|194398136|ref|YP_002038688.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|254783641|sp|B5E3A7|SYY_STRP4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147923173|gb|EDK74287.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|194357803|gb|ACF56251.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|301800846|emb|CBW33503.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|182685035|ref|YP_001836782.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303256064|ref|ZP_07342086.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259601|ref|ZP_07345577.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262046|ref|ZP_07347991.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264502|ref|ZP_07350421.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266777|ref|ZP_07352658.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269003|ref|ZP_07354786.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|259517019|sp|B2IN18|SYY_STRPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182630369|gb|ACB91317.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301802770|emb|CBW35544.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302596980|gb|EFL64104.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636686|gb|EFL67176.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639153|gb|EFL69612.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641470|gb|EFL71834.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643685|gb|EFL73951.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645872|gb|EFL76100.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD + F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|228910512|ref|ZP_04074326.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 200]
 gi|229152861|ref|ZP_04281044.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1550]
 gi|228630681|gb|EEK87327.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1550]
 gi|228849076|gb|EEM93916.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 200]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|331265554|ref|YP_004325184.1| tyrosyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682226|emb|CBY99843.1| tyrosyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|317129956|ref|YP_004096238.1| tyrosyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474904|gb|ADU31507.1| tyrosyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 423

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/423 (35%), Positives = 223/423 (52%), Gaps = 17/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q+++   L  L ++  VT Y G+D T  SLH GHL  ++ L   Q  
Sbjct: 2   NLLEDLQFRGLVNQVTDEDGLKELLNKEAVTLYCGFDPTGDSLHIGHLLTILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPS +   R +     +++  +KIKG  S F+ +  G+T A ++
Sbjct: 62  GHKPLALVGGATGLIGDPSGKKAERTLNEQNIVEQFSDKIKGQLSRFLDFK-GETSAKLV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  ID LR++G  F +N ML+ +SV SR+     +SF EF+YMILQ+YDF E
Sbjct: 121 NNYDWIGSMSVIDFLRDVGKNFGLNYMLAKDSVESRI--SSGISFTEFSYMILQSYDFYE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK------TPKLFALTSPLLTTASGTKMGKT 240
           L KN  C+LQ+GGSDQWGNI  G++L  ++         K F  T PL+T A GTK GKT
Sbjct: 179 LYKNEGCKLQIGGSDQWGNITAGLELIRKMNGQEEDERAKAFGFTIPLVTKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
             GAIWL+ E TSPY F+Q+  N DD DV+ F K  T L   EI+   +   +      A
Sbjct: 239 EGGAIWLDPEKTSPYEFYQFLLNTDDNDVIKFLKYFTFLSQEEIEALEVEVAERPHERAA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGL 352
           +K +A E+T  VH     ++A   +   F      Q            +        +GL
Sbjct: 299 QKRLAEELTAFVHDEAALKQAKNISTALFSGGDLKQLTADEVLQGFKDVPSFTTETNIGL 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V AG + S  +AR  + + A+ IN          +  ++        +  GKK   
Sbjct: 359 IDLLVNAGISPSKRQAREDISNGAVYINGDRCQELDKVVGNEEKIDGQFTIIRRGKKKFF 418

Query: 413 ICH 415
           +  
Sbjct: 419 LIR 421


>gi|227501174|ref|ZP_03931223.1| tyrosine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216575|gb|EEI81979.1| tyrosine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 431

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/412 (39%), Positives = 247/412 (59%), Gaps = 7/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+  Q +N  EL  L     V  Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 26  NIFDELVDRGYYEQATNEEELKDLLKNESVKFYCGFDATADSLTVGHLIQIMVMMRMQNY 85

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT++IGDPS R + R++M  + I  N +     F  F+ +  G   A ML
Sbjct: 86  GHRPVALLGGGTTLIGDPSGRSDMRQVMTVERINHNADCFYKQFQRFLDFSDG--KATML 143

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL ++ +++ LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF++
Sbjct: 144 NNKDWLLNLNFVEFLRDVGSEFLVNEMIKKDAYKNRMAAG-GLTFFEFSYMLLQSYDFLK 202

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           + +     L+MGGSDQW NII G+DL ++ +  K + +T  LLTTA G KMGK+  GA+W
Sbjct: 203 MYREDGVSLEMGGSDQWSNIIGGVDLIKKHENGKAYGMTFSLLTTADGVKMGKSQKGAVW 262

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATE 305
           L++  TSPY  +QY RN+DD DV  F  +LT LP  E  R   + +  EIN+AK+I+A E
Sbjct: 263 LDENKTSPYEMFQYMRNVDDRDVEKFLLQLTFLPTGECKRLGNQTEASEINKAKEILAYE 322

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  +VHG+E+A++A  AA   F        MPT  I K ++ +G  LL L+ + G   S 
Sbjct: 323 VVKLVHGKEKADEALAAARALFSGKGDESAMPTSQIGKADLPKG--LLALMTETGLTKSN 380

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR ++   + IN++ I++   ++  + F+    I +  GKKN     L 
Sbjct: 381 GEARRAIQQGGVSINDTKITDPSFEVTEEIFEEGR-IIIKKGKKNFHKVELA 431


>gi|75760723|ref|ZP_00740746.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|206969502|ref|ZP_03230456.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218234669|ref|YP_002369456.1| tyrosyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218899815|ref|YP_002448226.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903177|ref|ZP_04067311.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 4222]
 gi|228923415|ref|ZP_04086702.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954932|ref|ZP_04116950.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960931|ref|ZP_04122564.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229072165|ref|ZP_04205373.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus F65185]
 gi|229180981|ref|ZP_04308316.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 172560W]
 gi|74491778|gb|EAO54971.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|206735190|gb|EDZ52358.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218162626|gb|ACK62618.1| tyrosine--tRNA ligase [Bacillus cereus B4264]
 gi|218542348|gb|ACK94742.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228602538|gb|EEK60024.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 172560W]
 gi|228710903|gb|EEL62870.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus F65185]
 gi|228798827|gb|EEM45807.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804753|gb|EEM51354.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228836236|gb|EEM81590.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228856459|gb|EEN00985.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 4222]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|25028096|ref|NP_738150.1| tyrosyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259505648|ref|ZP_05748550.1| tyrosine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|81750575|sp|Q8FTM1|SYY_COREF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23493380|dbj|BAC18350.1| putative tyrosyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259166779|gb|EEW51333.1| tyrosine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 421

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/424 (33%), Positives = 225/424 (53%), Gaps = 15/424 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ +  LS RG I+Q ++   L    +Q  +T Y G+D T  SLHAGHL  L++L   
Sbjct: 1   MTTNIIDELSWRGLINQSTDLDALREA-TQEPITLYCGFDPTGPSLHAGHLVPLLMLRRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI L GG T +IGDP      R M  +  + E  E+I    S F+ +  G+  A
Sbjct: 60  QQAGHNPIVLAGGATGMIGDPRDVG-ERTMNSADTVAEWAERISDQLSRFVDFE-GEHAA 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  W  ++  +  LR++G  F +N ML+ ++V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 118 RLVNNAEWTNNMSVVTFLRDVGKHFPLNTMLARDTVKRRLETD-GISYTEFSYMLLQAND 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           FVEL + ++C LQ+GG DQWGNI+ G+DL  R++   +  +T PL+T + G K GK+   
Sbjct: 177 FVELNRRFNCILQVGGGDQWGNIVSGVDLNRRVQGKSVHGITVPLVTDSEGKKFGKSTGG 236

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKK 300
           G++WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+D +     +     EA++
Sbjct: 237 GSLWLDPEMTSPYSWYQYFINAADADVIRYLRWFTFLTKEELDELEVEVAERPFKREAQR 296

Query: 301 IIATEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGL 352
            +A E+T +VHG E       AA            D       +    +++ +      +
Sbjct: 297 RLAREMTNLVHGEEATAAVELAAQALFGRAELRDLDEKTLEASVSETEVAEIQPGEPRTI 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L++ +G   S   ARR +      +NN  I+ +  +    D      + L  GKKN  
Sbjct: 357 VDLLIASGLVDSRGAARRTISEGGAYVNNERITADDWEPSESDLLHGQWLVLRKGKKNFA 416

Query: 413 ICHL 416
              +
Sbjct: 417 GVKI 420


>gi|319948165|ref|ZP_08022325.1| tyrosyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438149|gb|EFV93109.1| tyrosyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 426

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/429 (35%), Positives = 223/429 (51%), Gaps = 15/429 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++ L  L  RG I Q ++   L      G V+ Y G+D T  SLHAGHL  L+ L
Sbjct: 1   MTVVTNNILDELQWRGLIAQSTDLDALRTHLDAGTVSLYCGFDPTGPSLHAGHLIPLLTL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L GG T +IGDP      R M  S  + E  E+I G    F+    G 
Sbjct: 61  RRFQLAGHRPIVLAGGATGMIGDPREVG-ERVMNTSDTVAEWTERIAGQLELFVDLTEGP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A ++NN  W   +  I+ LR++G  FS+N ML  ++V+ RL+ E  +SF EF+YM+LQ
Sbjct: 120 TGARVVNNMQWTGHMTVIEFLRDVGKHFSLNTMLGRDTVKRRLEGE-GISFTEFSYMLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF++L +N  C LQ+GGSDQWGNII G+DL  R+    + A+T PL+T+A G K GK+
Sbjct: 179 ANDFLQLRRNMGCTLQLGGSDQWGNIIGGVDLNRRVDGETVHAMTVPLVTSADGKKFGKS 238

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
              G++WL+  MTSPY ++QY+ N  DADVV + +  + L   EID +         +  
Sbjct: 239 TGGGSLWLDPSMTSPYTWYQYFLNTADADVVRYLRWFSFLGREEIDELEALTRDKPHLRA 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-------- 349
           A+K +A E+TT+VHG    E    AA   F     +  +   +++      G        
Sbjct: 299 AQKRLAEEMTTLVHGVAATESVQAAAQALFGRGELN-GLDEATLAAALEDAGAVEIAPGS 357

Query: 350 -MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V +G + S   ARR +      +NN  +S+ +      D    G + L  GK
Sbjct: 358 PTTIVDLLVASGLSESKGAARRAVGEGGAYVNNERVSDPEWTPSSGDLLHGGWLVLRRGK 417

Query: 409 KNHIICHLC 417
           KN     + 
Sbjct: 418 KNFAGVRIS 426


>gi|157150873|ref|YP_001451195.1| tyrosyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189029777|sp|A8AZI5|SYY_STRGC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157075667|gb|ABV10350.1| tyrosyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 221/417 (52%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRQELEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+G  +  + +  G+  A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQGQLAGLLDFENGQNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFIL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+WL
Sbjct: 181 NQKHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDASGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N + TSPY  +Q+W N+ D D V F K  T L + EI+ + K          A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDDDAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG +  ++A     + F  +I +  +  +          + +    + ++ L+V 
Sbjct: 301 VVTLVHGEKAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVDLLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 AGVVNSKRQAREDVQNGAIYVNGDRIQDLDYTLSDADKLENELTVIRRGKKKYFVLT 417


>gi|288904305|ref|YP_003429526.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306830335|ref|ZP_07463505.1| tyrosine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977301|ref|YP_004287017.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731030|emb|CBI12574.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304427360|gb|EFM30462.1| tyrosine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177229|emb|CBZ47273.1| tyrS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 145/418 (34%), Positives = 222/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVTKIQNQLSRFLDFENGDNKAVMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFGNVSFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K     +    A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIAEIEKEFNAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I S     +    + V            ++ ++V
Sbjct: 300 EVVTLVHGEEAYKQALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQADDNRNIVEVLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A  + S  +AR  +++ AI IN   I +    +   D        +  GKK + +  
Sbjct: 360 AAKISPSKRQAREDVQNGAIYINGERIQDLAYTLSDDDKIDNELTVIRRGKKKYFVLT 417


>gi|322375991|ref|ZP_08050501.1| tyrosine--tRNA ligase [Streptococcus sp. C300]
 gi|321278941|gb|EFX55984.1| tyrosine--tRNA ligase [Streptococcus sp. C300]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSGADKLENELTVIRRGKKKYFVLT 417


>gi|163942389|ref|YP_001647273.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229062344|ref|ZP_04199662.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH603]
 gi|229169389|ref|ZP_04297099.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH621]
 gi|163864586|gb|ABY45645.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228614152|gb|EEK71267.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH621]
 gi|228716949|gb|EEL68633.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH603]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|256832352|ref|YP_003161079.1| tyrosyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256685883|gb|ACV08776.1| tyrosyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 422

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/413 (34%), Positives = 221/413 (53%), Gaps = 10/413 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L  RG + Q ++   L      G VT Y G+D TA SLH GHL QL++L  LQ
Sbjct: 1   MTNVLDELQWRGLVSQTTDIDALRAAFENGPVTYYCGFDPTAPSLHHGHLVQLVVLKHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GG T +IGDP      R +   + +   +E+++     F+ +  G+  A+
Sbjct: 61  RAGHRPIALVGGATGLIGDPRM-SGERVLNSKEVVAGWVERLRSQIERFLDFE-GENAAM 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR++G  + +  ML+ ++V  RL  ++ +SF EF+Y ILQ  DF
Sbjct: 119 MVNNLDWHGQLSALDFLRDVGKHYRLGTMLAKDTVARRLASDEGISFTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ GG+DQWGN++ G++L  +     + ALT+PL+T A GTK GK+  GA
Sbjct: 179 LELNRRYGCTLQTGGNDQWGNLLSGVELIRKSDRVAVHALTTPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+  M SPY F+Q+W N DD DV+ + K  T     +I+    +  +  +  EA+K +
Sbjct: 239 VWLDPAMMSPYAFYQFWVNSDDRDVIGWLKTFTFRSRQDIEALEQSLEERPQAREAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP------TISISKDEVSRGMGLLTLI 356
           A ++T MVHG   A++A  A+   F                T  +    +S G  ++  +
Sbjct: 299 AFDVTAMVHGERAAQQAIAASAALFGRGAFEDLAESTLVAVTAELDIATISVGSPVVDAL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V+AG   S   ARR +      INN  +S+ +             + L  GKK
Sbjct: 359 VEAGLVQSKAAARRAITEGGASINNVRVSDVEAVFTEDQLLHGAWVILRRGKK 411


>gi|187933845|ref|YP_001887352.1| tyrosyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|254783584|sp|B2TQ95|SYY_CLOBB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|187721998|gb|ACD23219.1| tyrosine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 406

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 175/412 (42%), Positives = 251/412 (60%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVLDELLDRGYIKQFTHEEETRKLLENEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +      AL
Sbjct: 61  RAGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDD--KAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF
Sbjct: 119 IVNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA
Sbjct: 177 YVLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A 
Sbjct: 237 LWLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA+KA  AA   F       ++PT+ ISK+++  G  +L +I K     S
Sbjct: 297 EVTKLVHGDEEAKKAEEAANALFSGGADMSNVPTVIISKEDL--GSTVLDVIAKVKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++   + IN   I+     +   DF       +  GKKN+    +
Sbjct: 355 KKEGRRLIEQGGLSINGEKITELTRTLNDDDFKDGS-ALIKRGKKNYNKIEI 405


>gi|229076168|ref|ZP_04209136.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-18]
 gi|229099139|ref|ZP_04230073.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-29]
 gi|228684367|gb|EEL38311.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-29]
 gi|228707031|gb|EEL59236.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-18]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 227/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILDLEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|295706895|ref|YP_003599970.1| tyrosyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804554|gb|ADF41620.1| tyrosyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 419

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/418 (38%), Positives = 240/418 (57%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++ + L  L S+  V  Y G+D TA SLH GH+  +++L   Q+ 
Sbjct: 2   DILQDLEFRGLINQQTDEKGLSELLSKESVRLYCGFDPTADSLHIGHMLPVLILRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +   + +    E+IKG  S F+ +  G+  A++ 
Sbjct: 62  GHQPIALVGGGTGLIGDPSGKKAERTLNEKETVAMFSERIKGQLSRFLDFEEGENAAVIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR+IG  F +N M++ +SV+SR+  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWIGSLDVITFLRDIGKNFGINYMMAKDSVQSRI--ESGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L + Y+C+LQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GAI
Sbjct: 180 LYQTYNCKLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTVPLVTKADGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    +  E  EA+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSHEEINELAASAKEAPEKREAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
             +TT+VHG E  E+A   +   F  SI       I     +V         +GL+ L+V
Sbjct: 300 AAMTTLVHGEEALEQAIRISQALFSGSISELTAEEIKQGFKDVPSYTHTGEDIGLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N     + +  +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDISNGAIYLNGEREQDLQKTVGAEDRIEGQFTVIRRGKKKYTLIQ 417


>gi|332198914|gb|EGJ12995.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   AIWL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAIWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|103487134|ref|YP_616695.1| tyrosyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977211|gb|ABF53362.1| tyrosyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 422

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 201/415 (48%), Positives = 280/415 (67%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++   LD L ++ +V  YIG+D TA SLH G L Q+M+L
Sbjct: 15  MTNYQSDLLRLLDERGYIHQMTDAEGLDALAAKQIVPGYIGFDATAPSLHVGSLVQIMML 74

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+TGHKPI LMGGGT+ IGDP+ RDESR+M+  + I  NI  I  IF  F+ +G G 
Sbjct: 75  RRLQQTGHKPIVLMGGGTTRIGDPTGRDESRKMLSDEVIAANIASIFSIFRQFLVFGDGP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N+ WL  + YI+LL+E+G  F++NRML+F+SV+ RL+REQ ++FLEFNYMILQ
Sbjct: 135 TDAVMVDNQDWLGKLGYIELLQEVGRHFTINRMLTFDSVKLRLEREQPMTFLEFNYMILQ 194

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L++    RLQMGGSDQWGNI+ G++LG R+    L+ LT+PLLTTA+G KMGKT
Sbjct: 195 GYDFRHLSREMGVRLQMGGSDQWGNIVNGMELGRRMDGADLYGLTTPLLTTAAGAKMGKT 254

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN E  S +++WQYWRN DD DV  F K  T LP++EI R+  L+G EINEAKK
Sbjct: 255 AAGAVWLNPEQLSHFDYWQYWRNCDDRDVGKFLKLFTDLPLAEIARLEALEGAEINEAKK 314

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T M  G + A  AA  A + F+       +P ++   D    G+G++  + + G
Sbjct: 315 ILANEATAMCRGVDAASTAAETATQTFEKGRIGGDLPHVAAPAD----GIGIVDALRELG 370

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           FA S  EARR L+  A++++ S++ +   +I        G+I +S G K H +  
Sbjct: 371 FAASNKEARRKLEEGAVRVDGSVVRDPSYRIVPA----GGDIAISLGAKKHGLVT 421


>gi|21220307|ref|NP_626086.1| tyrosyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|81550098|sp|Q9RJ50|SYY_STRCO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|6117861|emb|CAB59434.1| tyrosyl-tRNA synthetase (EC 6.1.1.1) [Streptomyces coelicolor
           A3(2)]
          Length = 422

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 136/423 (32%), Positives = 219/423 (51%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNSPETVAGWVERLRGQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C +Q GGSDQWGN+  G+DL  R      + A  +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDASVHAYATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+    +E++ + +  + +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSRAELEELERQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVSRGMGLLTL 355
             E  T +        A  AA +          +           +    V+    ++ L
Sbjct: 299 LAEELTTLVHGAGQTAAVIAASKALFGQGELAELDEATLAAALSELPHVRVAEPAPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNAKVTGEDAVPAKEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 ITG 421


>gi|229135496|ref|ZP_04264282.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST196]
 gi|228647961|gb|EEL04010.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST196]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|160880710|ref|YP_001559678.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189083647|sp|A9KMS8|SYY_CLOPH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160429376|gb|ABX42939.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 410

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 178/412 (43%), Positives = 259/412 (62%), Gaps = 4/412 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +   +L ERGFI Q ++  E   L  +  VT YIG+D TA SL AGH   +M +  +
Sbjct: 1   MSENIYDVLLERGFIEQATHEAETKELLGKEKVTFYIGFDATADSLTAGHFLTVMAMMHM 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI+L+GGGT++IGDP+ + + R MM  + I  N +  +   S FI +      A
Sbjct: 61  QRAGHRPIALLGGGTTMIGDPTGKSDMRSMMTRETIDHNAQCFQEQLSKFIDFSDD--KA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL ++ Y++ LREIG  FSVN+ML+ E  + R+  E+ L+F EFNYM++Q+YD
Sbjct: 119 IIANNADWLLNLNYVEFLREIGVHFSVNKMLTAECYKQRM--EKGLTFFEFNYMLMQSYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K Y C+LQ+GG+DQW NI+ G+DL  R +    F LT  LLTT+ G KMGKT+ G
Sbjct: 177 FWVLYKKYGCKLQLGGNDQWSNILGGVDLIRRKEQAPAFGLTFKLLTTSEGLKMGKTMKG 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN E TSPY F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN AK+++A
Sbjct: 237 AVWLNPEKTSPYEFYQYWRNIEDVKVEECLGLLTFLPMDEVRRLGALEGAEINHAKEVLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT +VHG EEA+KA  AA   F   + S+HMPT + S      G+ L+T+++ A  AT
Sbjct: 297 YEITKIVHGEEEAKKAQEAAKSLFAGGVTSEHMPTTTYSSAAFEEGIDLITMMIDAKLAT 356

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S ++ARR+++   + +N+  +++   + K  DF+  G + +  GKK + +  
Sbjct: 357 SRSDARRNIEQGGVSVNDVKVTDFARKFKSNDFNDDGALLVKKGKKAYHLFR 408


>gi|56697334|ref|YP_167700.1| tyrosyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81349511|sp|Q5LQK5|SYY_SILPO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56679071|gb|AAV95737.1| tyrosyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 415

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 210/413 (50%), Positives = 281/413 (68%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    +G    YIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFIAVMMERGFLADCTDYQGLDEALMKGCQPGYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  I+ +F+++I Y +G +  A
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTPAQIDDNIAGIRKVFAAYIDYDSGAENAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNNE WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNEEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FMELNRRYGCILQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A
Sbjct: 246 AVWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTELPVGECDRLGALAGSEINAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T + HG E A  A   A E F+       +PT+++   ++     ++ LIVK G A 
Sbjct: 306 NEVTALCHGAEAAATAEATAREVFEKGGIGDDLPTLTLGAADLPA--SIVQLIVKTGLAK 363

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  +  ++N++ +++  + I+  D  +   IKLS GKK H +  L
Sbjct: 364 SGKEAKRLIAEDGARLNDAPLTDAGMMIEAGDLAAP--IKLSAGKKRHALVQL 414


>gi|282927858|ref|ZP_06335469.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282590368|gb|EFB95447.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A10102]
          Length = 420

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 146/425 (34%), Positives = 228/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MMNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDH-GA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + EA+K
Sbjct: 238 GAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A E+T  +HG +    A   +   F                + +P +++S    +   
Sbjct: 298 TLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLS----NDTT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ ++++ G + S  +AR  + + AI IN     +    +  +D        +  GKK 
Sbjct: 354 NIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|213966317|ref|ZP_03394499.1| tyrosyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951023|gb|EEB62423.1| tyrosyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 434

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/422 (36%), Positives = 224/422 (53%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C    +T Y G+D T  SLHAGHL  +++L   Q  
Sbjct: 17  NIIDELQWRGLINQSTDVDALREACEN-PITLYCGFDPTGDSLHAGHLVPMIMLRRFQLA 75

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP      R M+    I+ N+E IKG    FI +  G+  A M+
Sbjct: 76  GHHPIALAGGATGFIGDPRDVG-ERSMLSQDAIEHNLEAIKGQLRRFIDFE-GEAPATMV 133

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V+
Sbjct: 134 NNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVQ 192

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L +NYDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 193 LRRNYDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDAQGQKFGKSTGGGKL 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E TSPY+++QY+ N  D+ V+ + +  T L   EI        +     EA++ +A
Sbjct: 253 WLDAEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYEVAVAERPFKREAQRRLA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    AA   F  +  ++         +    +++         + L
Sbjct: 313 QEMTNLVHGEEATKAVELAAQALFGRAELTELDETTLAGAVSETEVAEIAEGEPRTAVDL 372

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG A S  EARR +K      NN  I +E  +   +D      I L  GKKN     
Sbjct: 373 LVAAGLAKSKGEARRTIKEGGAYANNQRIEDEAWEPAAEDLLHGKWIVLRRGKKNFAGVK 432

Query: 416 LC 417
             
Sbjct: 433 FV 434


>gi|262283750|ref|ZP_06061514.1| tyrosyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260596|gb|EEY79298.1| tyrosyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 222/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRQELEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+G  +  + +  G+  A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQGQLAGLLDFENGQNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFIL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+WL
Sbjct: 181 NQKHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDASGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N + TSPY  +Q+W N+ D D V F K  T L + EI+ + K          A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDDDAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG +  ++A     + F  +I +  +  +          + +    + ++ L+V 
Sbjct: 301 VVTLVHGEKAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVDLLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 AGVVNSKRQAREDVQNGAIYVNGDRIQDLDYTLSDADKLENELTVIRRGKKKYFVLT 417


>gi|222152308|ref|YP_002561483.1| tyrosyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254783646|sp|B9DSZ3|SYY_STRU0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222113119|emb|CAR40521.1| putative tyrosyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 141/418 (33%), Positives = 220/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E   KIKG  S F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSGKIKGQLSQFLDFENGANKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+W
Sbjct: 180 LNQKFNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDANGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D + F K  T L + EI  + K     +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDEDAIRFLKIFTFLSLEEIAEIEKAFDAARHERLAQKTLAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + ++ ++V
Sbjct: 300 EVVTLVHGEEAFKQALNITEQLFAGNIKNLSAAELKQGLSNVPNYQVQDEDNLNIVEILV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +  + S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 360 SSSISPSKRQAREDVQNGAIYLNGERIQDLDYTLTEDDKIDGQLTVIRRGKKKYAVLT 417


>gi|315612023|ref|ZP_07886940.1| tyrosine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315825|gb|EFU63860.1| tyrosine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDTDKLENELTVIRRGKKKYFVLT 417


>gi|325674262|ref|ZP_08153951.1| tyrosine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325554942|gb|EGD24615.1| tyrosine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 425

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 228/425 (53%), Gaps = 13/425 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   
Sbjct: 1   MTENILDELTWRGLIAQSTDLDALRRETEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI + GG T +IGDP      R M  +  + +  ++I+     F+ +    T A
Sbjct: 61  QRAGHRPIVMAGGATGMIGDPRDVG-ERVMNTADTVADWADRIRSQLERFVDFDESPTGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 120 VIENNANWTSKLTAIDFLRDVGKHFSVNVMLARDTVKRRLETD-GISYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           FV L +NY C LQ+GGSDQWGNII G+DL  +L    + A+T PL+T+A G K GK+   
Sbjct: 179 FVHLRRNYGCTLQVGGSDQWGNIIAGVDLNRKLDGESVHAMTVPLVTSADGKKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           G++WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  +     +  +  EA++
Sbjct: 239 GSLWLDPEMTSPYAWYQYFVNTGDADVVKYLRWFTFLTQEELAELEVATAERPQAREAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGL 352
            +A E+TT+VHG+   +    A+            D S  +  +   SI++        +
Sbjct: 299 RLAAEMTTLVHGQANTDAVELASKALFGRAELTDLDESTLAAALKEASIAEVAGDAPRTI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S   ARR +K     +NN  + ++    +  D      + +  G+KN  
Sbjct: 359 VDLLVASGLSESKGAARRAVKEGGAYVNNQRVESDDWTPESSDLLHGRWLVIRRGRKNFA 418

Query: 413 ICHLC 417
              + 
Sbjct: 419 GIKVI 423


>gi|289550516|ref|YP_003471420.1| Tyrosyl-tRNA synthetase, cluster 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658007|ref|ZP_07910881.1| tyrosine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180048|gb|ADC87293.1| Tyrosyl-tRNA synthetase, cluster 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315497043|gb|EFU85364.1| tyrosine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 420

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/425 (33%), Positives = 232/425 (54%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L  RG I+Q ++   ++ L ++  V+ Y G D TA SLH GHL   + L   
Sbjct: 1   MTNALLEDLKWRGLIYQQTDEEGIEELLNKEQVSLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +   +++++N++ I        ++G  +  A
Sbjct: 61  QQHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEDNVQGINAQMHKLFEFG-TEKGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN+ WL  I  I  LR+ G    VN ML+ +S++SRL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNKDWLGQISLISFLRDYGKHVGVNYMLAKDSIQSRL--ENGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +N +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGHLNQNLNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N  D DV+ F K  T L   EI+R+   + +   + EA+K
Sbjct: 238 GAVWLDADKTSPYEFYQFWINQSDDDVIKFLKYFTFLNKEEIERLEASRDEQPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T ++HG++  + A   +   F                + +P + +S D      
Sbjct: 298 ALAENVTKLIHGQDALDDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSAD----NT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +V+ G ++S  +AR  + + AI IN     +    +  +D        +  GKK 
Sbjct: 354 NIVEALVETGISSSKRQAREDVNNGAIYINGERQQDVNYNLSSEDKIENAFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|299535427|ref|ZP_07048749.1| tyrosyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729188|gb|EFI69741.1| tyrosyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 422

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/428 (33%), Positives = 240/428 (56%), Gaps = 20/428 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ L  L  RG ++Q ++   +  L ++  V+ Y G D TA S+H GH+  L+ L   
Sbjct: 1   MTNELLQDLEWRGLLYQQTDAEGMAKLLNEQSVSLYCGVDPTADSMHIGHIVPLLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+       ++      A
Sbjct: 61  QKAGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRSQLERIFEFAEDGNGA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D
Sbjct: 121 QLVNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGID 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           +  L  +Y+CR+Q+GGSDQWGNI  G+++  +      K F +T PL+T A GTK GKT 
Sbjct: 179 YNHLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTA 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAK 299
            GA+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +   + +A+
Sbjct: 239 GGAVWLDSKKTSPYEFYQFWINAADADVIKYLKIFTFLSREEIEALAVSVEEEPHLRKAQ 298

Query: 300 KIIATEITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRG 349
           K +A E+T ++HG+E  E+A             A+   +M    + +P+I ++KD+    
Sbjct: 299 KALAEEMTRLIHGQEALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKDD---- 354

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V+AG ++S  +AR  + + AI +N   +++ +  +  +D        +  GKK
Sbjct: 355 KNIVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTDLEYVVDAKDRLEDAFSIVRRGKK 414

Query: 410 NHIICHLC 417
            + +    
Sbjct: 415 KYHMVKFI 422


>gi|310816533|ref|YP_003964497.1| tyrosyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755268|gb|ADO43197.1| tyrosyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 416

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 209/418 (50%), Positives = 278/418 (66%), Gaps = 3/418 (0%)

Query: 1   MP-AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    KS+FL+++ ERG+I   +N + LD      VV AYIGYD TA+SLH GHL  +M+
Sbjct: 1   MTYTPKSEFLAVMIERGYIADCTNYQALDAALMSQVVPAYIGYDATAASLHVGHLLNIMM 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L WLQKTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ F++Y   
Sbjct: 61  LRWLQKTGHQPITLMGGGTTKVGDPSFRSDERPLLTPAKIDENIAGMQQVFARFLRYDDS 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
              A MLNN  WL S+ Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMIL
Sbjct: 121 ANGAKMLNNAEWLDSLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF+EL + Y   LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK
Sbjct: 181 QAYDFLELNRRYGTLLQMGGSDQWGNIVNGIDLTRRVIDKEIYGLTSPLLTTSDGKKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           + +GAIWL  +M SPY FWQ+WRN  DADV  F K  T LP++E DR+  L G EIN AK
Sbjct: 241 SANGAIWLRGDMLSPYEFWQFWRNSTDADVARFLKLYTELPVAECDRLGNLGGSEINAAK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            I+A E+TT++HG E A  A   A E F+       +P +++S DEV  G+ L  L+V++
Sbjct: 301 IILANEVTTLLHGAEAAAAAEATAREVFENGGVGDDLPQLALSVDEVGDGISLAQLVVRS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G A +  + +R +    +K+N+    +        D +    +KLS GKK H +  + 
Sbjct: 361 GLAKTGKDGKRLIAEGGLKVNDETTVDAGRLFTAADLEVP--VKLSAGKKRHALVSIS 416


>gi|324994406|gb|EGC26320.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 419

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 224/420 (53%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ
Sbjct: 1   MMHIFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T +IGDPSF+D  R +   + ++   + I+   S F+ +  G   A 
Sbjct: 61  LAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWAKSIQDQLSRFLDFEKGDNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF
Sbjct: 121 MVNNYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A
Sbjct: 179 YVLNQNHGVTLQIGGSDQWGNMTAGTELLRRKADKIGHVMTVPLITDATGKKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WLN + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +          A+K++
Sbjct: 239 VWLNPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ ++VHG+E  ++A     + F  +I +  +  +          + +    + ++ L
Sbjct: 299 AREVVSLVHGQEAYQEALNITEQLFAGNIKNLSIKELKQGLRGVPNYQVQAEDNLNIVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 359 LVIAGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLNALDKLEDELTVIRRGKKKYFVLT 418


>gi|89100096|ref|ZP_01172965.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085186|gb|EAR64318.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 418

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/419 (33%), Positives = 224/419 (53%), Gaps = 13/419 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG ++Q ++    + L  +  ++ Y G D TA S+H GHL   + L   Q  
Sbjct: 2   SLLEDLKWRGIVYQQTDEEGTEELLKKEKISLYCGIDPTADSMHIGHLLPFLTLRRFQNE 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T +IGDPS + E R++   + IQ N+  I+        +  G+  ALM+
Sbjct: 62  GHRPIVLVGGATGLIGDPSGKSEERKLQTLEAIQHNVSSIQKQLKKIFSFE-GENGALMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  +  LR+ G    VN ML+ +++ SRL  +  +SF EF Y ILQA DF+ 
Sbjct: 121 NNYDWAGSMDIVTFLRDYGKHVGVNYMLAKDTIASRL--DTGISFTEFTYTILQAMDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L + ++C++Q+GGSDQWGNI  G++L  ++     K + +T PL+T A GTK GKT SGA
Sbjct: 179 LYEKHNCKMQIGGSDQWGNITTGLELIRKMMPEGAKGYGVTIPLVTKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N  DADV+ + K  T LP  EI+ +     +   + +A+K +
Sbjct: 239 IWLDPEKTSPYEFYQFWINTADADVIKYLKYFTFLPKEEIEALENSLAEEAHLRKAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T ++HG    E+A   +   F   + +     I+    +V          G++ L+
Sbjct: 299 AEEMTKLIHGEAALEQAIKISAALFSGDVKNLTASEITQGFKDVPSYEPTGEENGIVDLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             A  + S  +AR  + + A+ +N   I+    ++  +D        +  GKK + +  
Sbjct: 359 TAAKISPSKRQAREDVSNGAVYVNGERITATDYELTEKDRIEGQFTIIRRGKKKYFLIR 417


>gi|295839656|ref|ZP_06826589.1| tyrosine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197698497|gb|EDY45430.1| tyrosine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 422

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/423 (32%), Positives = 222/423 (52%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +     I + +++++     F+ +  G + A 
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNDPATIAQWVDRLRAQIEPFLDFE-GPSAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I  LR++G  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTSGLSAIAFLRDVGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  G+DL  R++    + AL +PL+T A GTK GKT  G
Sbjct: 179 LELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPDAVVHALATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-GKEINEAKKII 302
           A+WL+  MT+PY F+Q+W N+DD D+  + + L+    +E++++  +   +    A +  
Sbjct: 239 AVWLDPSMTTPYAFYQFWLNVDDRDISRYTRILSFRSRAELEKLEAVTAERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVSRGMGLLTL 355
             E  T +   E   +A  AA            +           + +  V+  + ++ L
Sbjct: 299 LAEELTTLVHGEAQTRAVVAASRALFGQGELAGLDGATLAAALGELPRAVVAEPVSVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G   S + ARR +K     +NN  ++ E       +      + L  GKKN     
Sbjct: 359 LVETGLVASKSAARRTIKEGGAYVNNVKVAGEDAVPAADELLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 ITG 421


>gi|169825148|ref|YP_001692759.1| tyrosyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831953|dbj|BAG08869.1| tyrosyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 415

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 172/420 (40%), Positives = 258/420 (61%), Gaps = 8/420 (1%)

Query: 1   MPAFK---SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M  +K    +    L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QL
Sbjct: 1   MINYKFEHENVFDELVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M++  +Q  GH PI L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G
Sbjct: 61  MVMMRMQAHGHIPICLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFG 120

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                A + NN+ WL ++ ++D +REIG  FSVN+ML+ ES ++R+  +Q L+F EF+YM
Sbjct: 121 DD--KAYIENNKDWLLNLNFLDFMREIGVHFSVNQMLTLESYKNRM--KQGLTFFEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           ++Q+YD++ L + Y C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KM
Sbjct: 177 LMQSYDYLVLYRKYGCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKM 236

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GK+  GA+WL++  T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+
Sbjct: 237 GKSQKGAVWLDENKTTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINK 296

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AK+++A E+  +VHG E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+ 
Sbjct: 297 AKEVLAFEVCKLVHGEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLT 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G   S +EARR +  N I +N++  ++ K  I + DF+    + +  GKK +    L 
Sbjct: 357 MTGLTQSNSEARRLVTQNGISVNDNKEADPKRVITIHDFNDD-ELIIKKGKKVYHRVKLV 415


>gi|307710959|ref|ZP_07647382.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617199|gb|EFN96376.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 418

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|256788572|ref|ZP_05527003.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289772465|ref|ZP_06531843.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289702664|gb|EFD70093.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 422

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 136/423 (32%), Positives = 219/423 (51%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNSPETVAGWVERLRGQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C +Q GGSDQWGN+  G+DL  R      + A  +PL+T A GTK GKT  G
Sbjct: 179 LQLYQRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDASVHAYATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+    +E++ + +  + +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSRAELEELERQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVSRGMGLLTL 355
             E  T +        A  AA +          +           +    V+    ++ L
Sbjct: 299 LAEELTTLVHGAGQTAAVIAASKALFGQGELAELDEATLAAALSELPHVRVAEPAPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNAKVTGEDAVPAKEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 ITG 421


>gi|303233835|ref|ZP_07320488.1| tyrosine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495030|gb|EFL54783.1| tyrosine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 415

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 172/420 (40%), Positives = 258/420 (61%), Gaps = 8/420 (1%)

Query: 1   MPAFK---SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M  +K    +    L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QL
Sbjct: 1   MINYKFEHENVFDELVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M++  +Q  GH PI L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G
Sbjct: 61  MVMMRMQAHGHIPICLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFG 120

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                A + NN+ WL ++ ++D +REIG  FSVN+ML+ ES ++R+  +Q L+F EF+YM
Sbjct: 121 ED--KAYIENNKDWLLNLNFLDFMREIGVHFSVNQMLTLESYKNRM--KQGLTFFEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           ++Q+YD++ L + Y C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KM
Sbjct: 177 LMQSYDYLVLYRKYGCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKM 236

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GK+  GA+WL++  T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+
Sbjct: 237 GKSQKGAVWLDENKTTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINK 296

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AK+++A E+  +VHG E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+ 
Sbjct: 297 AKEVLAFEVCKLVHGEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLT 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G   S +EARR +  N I +N++  ++ K  I + DF+    + +  GKK +    L 
Sbjct: 357 MTGLTQSNSEARRLVTQNGISVNDNKEADPKRVITIHDFNDD-ELIIKKGKKVYHRVKLV 415


>gi|294011411|ref|YP_003544871.1| tyrosyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674741|dbj|BAI96259.1| tyrosyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 405

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 210/415 (50%), Positives = 279/415 (67%), Gaps = 11/415 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M ++ SD L +L  RG+IHQ+++   LD L +  VV  YIG+D TA SLH GHL  +M+L
Sbjct: 1   MTSYSSDLLRLLDARGYIHQLTDAEGLDALAAGQVVPGYIGFDPTAPSLHVGHLVSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK GHKPI LMGGGT  IGDPSF+DE+R+++ +  I +N+  IK +F  F+ +G G 
Sbjct: 61  RQLQKAGHKPIVLMGGGTGKIGDPSFKDEARKLLTTDAIAQNVASIKRVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  ++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMLDNAEWLDRLEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ G++L  R+   ++F LT+PLLT A GTKMGKT
Sbjct: 181 AYDFLELSRRSACRLQMGGSDQWGNIVNGVELTRRVDGTQVFGLTTPLLTNADGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN++  S Y++WQ+WRN  DADV +  +  T LPM E++R+A LQG EINEAKK
Sbjct: 241 VGGAVWLNEDQLSSYDYWQFWRNTADADVANRLRLFTDLPMDEVERLAALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T +  G + A  AA  A   F+      ++PT S+     + G+ ++      G
Sbjct: 301 ILANEATALCRGADAAAAAAETARRTFEEGASDANLPTASLG----AEGLNIVQGTTALG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           FA S  E RR L   AI++N  ++S+  L +K  D       KLSFG K H +  
Sbjct: 357 FAASNKEVRRKLAEGAIRVNGEVVSDPALPLKAGD-------KLSFGAKKHGLIT 404


>gi|319651869|ref|ZP_08005993.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396428|gb|EFV77142.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 419

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/420 (35%), Positives = 225/420 (53%), Gaps = 14/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   ++    +  ++ Y G D TA S+H GHL   + L   QK 
Sbjct: 2   SLLEDLQWRGIIYQQTDEEGIENTLGKEAISLYCGVDPTADSMHIGHLLPFLTLRRFQKE 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T +IGDPS + E R++   + +Q N+  IK        +  G+  A+M+
Sbjct: 62  GHRPIVLVGGATGLIGDPSGKSEERKLQTLETVQHNVNCIKNQLKRIFDFE-GENGAIMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  +  LR+ G    VN ML+ +++ SRL  E  +SF EF Y ILQA DF+ 
Sbjct: 121 NNYDWAGSMDIVTFLRDYGKHVGVNYMLAKDTISSRL--ETGISFTEFTYTILQAMDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +N++C++Q+GGSDQWGNI  G++L  ++     K + LT PL+T A GTK GKT SGA
Sbjct: 179 LYENHNCKMQIGGSDQWGNITTGLELIRKMAPEGSKAYGLTIPLVTKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N  DADV+ + K  T L   EI+    A      + +A+K +
Sbjct: 239 IWLDSEKTSPYEFYQFWINTADADVIKYLKFFTFLSREEIEGLEKAVQDEPHLRKAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRG--MGLLTL 355
           A E+T M+HG    E+A       F   I +     I      +   E S G  +G++ L
Sbjct: 299 AEEMTRMIHGDAALEQAIKITAALFSGEIKNLSASEIKQGFKDVPSYEHSEGGELGIVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A  + S  +AR  + + A+ +N   I+     +  +D        +  GKK + +  
Sbjct: 359 LVAAKISPSKRQAREDVTNGAVSVNGERITELDYTLSDKDKIEDQFTVIRRGKKKYFLIK 418


>gi|254445843|ref|ZP_05059319.1| tyrosyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260151|gb|EDY84459.1| tyrosyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 428

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 145/425 (34%), Positives = 226/425 (53%), Gaps = 16/425 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++  +   EL     +G ++ Y G+D TA SLH G+L  L+ L   Q  G
Sbjct: 3   ILEDLHWRGLVNDCTAAEELAKRLEEGPISLYAGFDPTADSLHVGNLVPLIGLRRFQNYG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALML 126
           HKPI+L GG T  IGDPS +   R+++  + +  NI +++   +  + +    +  A ++
Sbjct: 63  HKPIALAGGATGSIGDPSGKKSERQLLTKEVLDHNIAQVRVQLTRLLDFSEDIENTAKLV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           +N +W+  I ++D LR+ G + +VN M+S +SV+SR+   +  +SF EF+YM+LQ YDF 
Sbjct: 123 DNASWMSQISFLDFLRDTGKYITVNSMVSKDSVKSRMGDEKSGISFTEFSYMLLQGYDFY 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GGSDQWGNI  G +L  +     ++ LT PL+T + G+K GK+  GAI
Sbjct: 183 HLNQAESCELQIGGSDQWGNITVGTELTRKKAGNTVYGLTLPLITNSDGSKFGKSEKGAI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+   TS Y F+QY+ N+DD DVV + K  T L   +I  + K   +      A   +A
Sbjct: 243 WLDPAKTSVYRFYQYFVNVDDRDVVRYLKFFTFLSQEQIAELEKQHAENPGARVAHHALA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEV--SRGMG 351
           TE+T ++HG    + A TA+   F   +           +  +PT  IS D++    G+ 
Sbjct: 303 TEMTNLIHGEHATQDAITASKILFGGGLDGISENALANVAGEIPTAKISADKLASEDGLL 362

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL  +V  G + S  EA++ +K     +NN  I     ++   D      I L  GKKN+
Sbjct: 363 LLDALVDTGLSNSRGEAKKAVKEGGAYVNNQRIQEMGYKLSDSDVHYGKYILLRRGKKNY 422

Query: 412 IICHL 416
               +
Sbjct: 423 AALIV 427


>gi|229129942|ref|ZP_04258908.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-Cer4]
 gi|228653633|gb|EEL09505.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-Cer4]
          Length = 418

 Score =  369 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            +++ CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHKCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|97197320|sp|Q65G35|SYY1_BACLD RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
          Length = 421

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 232/421 (55%), Gaps = 12/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  LS RG I Q ++   L  L  +  ++ Y G+D TA SLH GHL  +++L   Q
Sbjct: 1   MTHILDDLSFRGLIQQQTDEAGLRELLDKEKISLYSGFDPTADSLHIGHLLPILMLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI+L+GG T +IGDPS +   R +   + ++E  +KIK   S F+ +   +  A+
Sbjct: 61  LAGHRPIALVGGATGLIGDPSGKKAERTLNNEEIVREWSQKIKNQLSRFLDFEAEENPAI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+ DF
Sbjct: 121 MANNYDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSLDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           + L +N +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  G
Sbjct: 179 LNLYRNQECKLQIGGSDQWGNITSGLELIRKSEENAKAFGLTIPLVTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
           AIWL+KE TS Y F+Q+W N DD DVV + K  T L   EI+          E  EA+K 
Sbjct: 239 AIWLDKEKTSAYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEDLAEKTETAPEKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLT 354
           +A E+T +VHGRE  E+A   +   F   I       + +        + E +  + L+ 
Sbjct: 299 LAEEVTVLVHGREAFEQAVNISKALFSGDIKQLTAEEVKVGFKGVPSLEVEKADELPLVE 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V++  + S  +AR  + + A+ +N    ++    +   D        +  GKK + + 
Sbjct: 359 ILVQSKLSPSKRQAREDITNGAVYVNGERRTDVADVLTADDRIEGQFTVIRRGKKKYFLL 418

Query: 415 H 415
            
Sbjct: 419 T 419


>gi|319892786|ref|YP_004149661.1| Tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162482|gb|ADV06025.1| Tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464183|gb|ADX76336.1| tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 420

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/421 (33%), Positives = 219/421 (52%), Gaps = 12/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  LS RG ++Q ++   ++ L ++  V  Y G D TA SLH GHL   + L   
Sbjct: 1   MANALLEELSWRGLVYQQTDEEGIETLLNKEEVKIYCGADPTADSLHIGHLLPYLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +    ++ +N+  I+        +   +   
Sbjct: 61  QEAGHRPIVLVGGGTGMIGDPSGKSEERVLQTEAQVDKNVRGIQQQMEQLFDFNV-ENGP 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  WL  I  I+ LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA D
Sbjct: 120 ILVNNYDWLSQISLIEFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L + +DC+LQ+GGSDQWGNI  GI+L  R+     ++  T PL+T A G K GK+ S
Sbjct: 178 FGHLNRVHDCKLQIGGSDQWGNITSGIELMRRMYGVTDVYGFTIPLVTKADGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G IWL+ E TSPY F+Q+W N  D DV+ F K  T L  ++I+    + ++   + +A+ 
Sbjct: 238 GTIWLDPEKTSPYEFYQFWINTSDDDVIKFLKYFTFLSKTDIEALEKSVVEEPHLRKAQT 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLT 354
            +A E+T  +HG +   +A   +   F   + S     I     +V      +    ++ 
Sbjct: 298 TLAEEVTRFIHGNDALAEAQRISQALFKGDLKSLSAEEIKAGFKDVPQVTLSNETTNIVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+   ++S  +AR  + + AI IN     +    +   D        +  GKK + + 
Sbjct: 358 ALVETKISSSKRQAREDITNGAIYINGERQQDLAYTLSSDDRYDDTFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|319952577|ref|YP_004163844.1| tyrosyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421237|gb|ADV48346.1| Tyrosyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 431

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 150/434 (34%), Positives = 232/434 (53%), Gaps = 23/434 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++F++ L  RG +H      E        + +AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MKTNFVAELQWRGMLHDAMPGTE--EHLMNEMQSAYVGIDPTADSLHIGHLVGVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTD 122
           Q  GHKP +L+GG T +IGDPS +   R ++  + ++ N + +K   S F+ + G     
Sbjct: 59  QLAGHKPYALIGGATGMIGDPSGKSTERNLLDEKTLRHNQDALKAQLSRFLDFSGAADNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQ 180
           A+++NN  W+    +++ +R++G   +VN M++ +SV+ R   + ++ +SF EF Y ++Q
Sbjct: 119 AILVNNYDWMKDFSFLEFIRDVGKHITVNYMMAKDSVKKRLSSEAKEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L K ++C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLFKEHNCTLQMGGSDQWGNITTGTELIRRMGGGKGYALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G +WL+ E TSPY F+QYW N  D D   + K  T +   EI+       +   +   
Sbjct: 239 EGGNVWLDAERTSPYKFYQYWLNTSDEDAEKYIKIFTFIGKEEIEALVAEHKEAPHLRVL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +K +A EIT MVH +EE + A  A+   F  S                 + +P   ++  
Sbjct: 299 QKRLADEITVMVHSQEELDNAVEASGILFGKSTAASLKKLNEKTFLDIFEGVPQAEVAMA 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +V  G+ ++  +  K  F  S  EARR LK N+I +N   +  E   I  +D  +   + 
Sbjct: 359 DVEEGLDMIGALAAKTNFLGSNGEARRELKQNSISVNKEKVK-EDYIITKEDLINDKFVL 417

Query: 404 LSFGKKNHIICHLC 417
           L  GKKN+ +  + 
Sbjct: 418 LQRGKKNYFVVVVV 431


>gi|253582534|ref|ZP_04859756.1| tyrosyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251835679|gb|EES64218.1| tyrosyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 406

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 177/412 (42%), Positives = 257/412 (62%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L  RG++ Q ++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MENVFDVLVGRGYLKQFTHEEEMREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMSHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT++IGDPS R + R MM  + I  N+  IK     FI +  G   A+
Sbjct: 61  KHGHRPIALLGGGTAMIGDPSGRTDMRTMMSKETIAHNVAAIKKQMEKFIDFSDG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL  + YID +R+IG+ FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF
Sbjct: 119 LENNADWLLGLNYIDFIRDIGAHFSVNRMLAAECFKSRM--EVGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA
Sbjct: 177 LVLNQKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+DDADV      LT +PM E+ R++ L+G EINEAKKI+A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFIPMDEVKRLSALEGAEINEAKKILAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT M+HG EEA KA TAA   F        +P++ I +  +  G+GL+  +V+ G   +
Sbjct: 297 EITKMIHGEEEALKAKTAAEALFGGGQDMSSVPSVEIEEAVL--GIGLIDFLVEKGILKT 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR ++ N + I +S +++  + I  +D  + G   +  GKK +    L
Sbjct: 355 KSEGRRLVQQNGLNIGDSKVTDFTMPIT-KDLFANGEFLVKIGKKKYHKVVL 405


>gi|229112124|ref|ZP_04241667.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-15]
 gi|228671447|gb|EEL26748.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-15]
          Length = 418

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/416 (37%), Positives = 226/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +  + S  +AR  + + AI +N          +  +D        +  GKK + + 
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLI 416


>gi|227548150|ref|ZP_03978199.1| tyrosyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079812|gb|EEI17775.1| tyrosyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 423

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/426 (34%), Positives = 226/426 (53%), Gaps = 16/426 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +D ++ L  RG I+Q ++  +L    ++  +T Y G+D T  SLHAGHL  L++L
Sbjct: 1   MSTH-TDIIAELQWRGLINQSTDLEKLREE-TRQPITLYCGFDPTGPSLHAGHLVPLLML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L GG T  IGDP      R M     + +  ++I G  + F+ +  G 
Sbjct: 59  RRFQMAGHRPIVLAGGATGKIGDPRDVG-ERSMNSDDTVADWAQRISGQLARFMDFD-GD 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             AL++NN  W   +  I  LR++G  FS++ MLS ++V+ RL+ +  +S+ EF+YM+LQ
Sbjct: 117 NAALLVNNNDWTADMSVITFLRDVGKHFSLSTMLSRDTVKRRLEND-GISYTEFSYMLLQ 175

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DFV+L +N+DC LQ+GG DQWGN++ G+DL  R+   ++ ALT PL+T + G K GK+
Sbjct: 176 ANDFVQLRRNHDCVLQIGGGDQWGNLVGGVDLNRRMDGAQVHALTVPLVTDSEGKKFGKS 235

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
              G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+        +     E
Sbjct: 236 TGGGSLWLDPEMTSPYTWYQYFVNTADADVIRYLRWFTFLDSEELSRLETEVAESPFKRE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRG 349
           A+  +A E+T +VHG E    A  AA            D    +  +    + +     G
Sbjct: 296 AQIRLAQEMTDLVHGPEATRGAELAAQALFGRADLRELDERTLASAVSETRVHETAADAG 355

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V AG A S   ARR +K   +  NN  + +E       DF     + L  GKK
Sbjct: 356 ETIVDLLVGAGLADSKGAARRSIKEGGVYANNERVESEDFVPAADDFLHGRWLVLRRGKK 415

Query: 410 NHIICH 415
           N     
Sbjct: 416 NFAGVK 421


>gi|239637948|ref|ZP_04678909.1| tyrosyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596511|gb|EEQ79047.1| tyrosyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 420

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/425 (33%), Positives = 226/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MTNALIEDLKWRGLIYQQTDEAGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +   ++++ N++ I        ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEANVQGISNQMHKLFEFGTD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N  D DV+ F K  T L   EID++ +   +     EA+K
Sbjct: 238 GAVWLDADKTSPYEFYQFWINQSDEDVIKFLKYFTFLSKEEIDQLEQSKEEAPHKREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG +    A   +   F                + +P + +SKD      
Sbjct: 298 ALAENVTRFIHGEDALNDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSKDT----T 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +++ G  +S  +AR  + + AI IN     +   ++  +D        +  GKK 
Sbjct: 354 NIIDALIETGIGSSKRQAREDVNNGAIYINGERQQDVNYELTDEDKIEGAFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|322392516|ref|ZP_08065976.1| tyrosine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144508|gb|EFX39909.1| tyrosine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 418

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/417 (35%), Positives = 223/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKSLEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI IN   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDIQNGAIYINGDRIQDLDYILSDADKLENELTVIRRGKKKYFVLT 417


>gi|320547858|ref|ZP_08042142.1| tyrosine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447618|gb|EFW88377.1| tyrosine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 418

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/418 (35%), Positives = 222/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVVKIQNQLSRFLDFENGDNKAVMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFGNISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K     +    A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKEFNAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I S     +    + V            ++ ++V
Sbjct: 300 EVVTLVHGEEAYKEALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQEDDNRNIVEMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A  + S  +AR  +++ AI IN   I +    +   D        +  GKK + +  
Sbjct: 360 AAKISPSKRQAREDVQNGAIYINGERIQDLDYTLSDDDKIDNELTVIRRGKKKYFVLT 417


>gi|302379435|ref|ZP_07267922.1| tyrosine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312780|gb|EFK94774.1| tyrosine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 415

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 171/420 (40%), Positives = 258/420 (61%), Gaps = 8/420 (1%)

Query: 1   MPAFK---SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M  +K    +    L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QL
Sbjct: 1   MINYKFEHENVFDELVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M++  +Q  GH PI L+GGGT++IGDPS R++ R +M  + I +N  +     + FI +G
Sbjct: 61  MVMMRMQAHGHIPICLLGGGTTMIGDPSGRNDMRSIMTKEVIDKNARRFYSQMTRFIDFG 120

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                A + NN+ WL ++ ++D +REIG  FSVN+ML+ ES ++R+  +Q L+F EF+YM
Sbjct: 121 ED--KAYIENNKDWLLNLNFLDFMREIGVHFSVNQMLTLESYKNRM--KQGLTFFEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           ++Q+YD++ L + Y C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KM
Sbjct: 177 LMQSYDYLVLYRKYGCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKM 236

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GK+  GA+WL++  T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+
Sbjct: 237 GKSQKGAVWLDENKTTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINK 296

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AK+++A E+  +VHG E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+ 
Sbjct: 297 AKEVLAFEVCKLVHGEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLT 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G   S +EARR +  N I +N++  ++ K  I + DF+    + +  GKK +    L 
Sbjct: 357 MTGLTQSNSEARRLVTQNGISVNDNKEADPKRVITIHDFNDD-ELIIKKGKKVYHRVKLV 415


>gi|85374010|ref|YP_458072.1| tyrosyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787093|gb|ABC63275.1| tyrosyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 409

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 187/414 (45%), Positives = 271/414 (65%), Gaps = 7/414 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SD L +LSERG +HQI++   LD L  + VVT Y+G+D TA SLH G+L  +MLL
Sbjct: 1   MSEFESDLLQLLSERGHLHQITDAGALDALAMKEVVTGYVGFDPTAPSLHIGNLASIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+PI +MGGGT+ +GDPS RDE+R M+  +++  NI  IKG F   +++   +
Sbjct: 61  KRLQQAGHRPIVIMGGGTAKVGDPSGRDETRTMLTDEKLAGNIASIKGSFEQILRFDDSE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T AL++NN+ WL  + YI+LLR++G  F++NRML+F+SV+ RL REQ L+FLEFNYMI+Q
Sbjct: 121 TGALLINNDDWLNELGYIELLRDVGPHFTINRMLTFDSVKLRLDREQPLTFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYD++ L + Y CRLQ+GGSDQWGNI+ GI+L  R+   +++ +T+PL+T A G KMGK+
Sbjct: 181 AYDYLVLNREYGCRLQLGGSDQWGNIVNGIELCRRIDGKEVYGVTAPLITRADGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN+     Y+FWQYWRN DD DV  F +  T LP+ EI R+ +L+G  IN+AK 
Sbjct: 241 VDGAVWLNEAQLPAYDFWQYWRNTDDRDVGRFLRLFTDLPLDEIARLEQLEGAAINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T MV G + A  A   A + F      + +PT+++ ++E    M L  ++   G
Sbjct: 301 VLANEVTAMVRGADAARSAEATAAQTFAGGGAGEDLPTLTLGEEE----MSLPAVLTAIG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R +   A+K++     +    I          IK+S GKK H + 
Sbjct: 357 FTRSNGEAKRKIAEGAVKLDGEATRDPGAMIA---LAEGAEIKISLGKKRHGLL 407


>gi|255533200|ref|YP_003093572.1| tyrosyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255346184|gb|ACU05510.1| tyrosyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 428

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/428 (33%), Positives = 224/428 (52%), Gaps = 19/428 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++F+  L  RG +  +    E     ++G+   YIG+D TA SLH GHLTQ+M L   Q
Sbjct: 1   MTNFVEELRWRGMLQDMMPGTE--EKLNEGMTAGYIGFDPTADSLHVGHLTQIMTLIHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP +L+GG T ++GDPS +   R +     ++ N+  +K   S F+K+      A+
Sbjct: 59  RAGHKPYALVGGATGMVGDPSGKSAERNLQTEDMVEHNLAGMKRQLSRFLKFEAAGNGAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +   D +R+IG   +VN M++ +SV+ RL+ +  LSF EF Y ++Q YDF
Sbjct: 119 MINNADWFKDMGLFDFIRDIGKHITVNYMMAKDSVKRRLEGDSGLSFTEFCYQLIQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K+++C +QMGGSDQWGNI+ G +L  R      +A+T+ L+  A GTK GKT SGA
Sbjct: 179 YYLWKHHNCLVQMGGSDQWGNIVTGTELIRRKDAGTAYAITTHLIKKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WL+ E TSPY F+Q+W N  D D   + +  T     EI+ +         +   +K +
Sbjct: 239 VWLDAEKTSPYKFYQFWLNASDDDTKKWIRIFTLKTKEEIETLENEHNAAPHLRILQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVSR 348
           A +IT   H  E  E A   +   F                    + +P  +ISKDE+ +
Sbjct: 299 AEDITIRTHSEEALETALKTSDFLFGNGSLEFFKTLSVAQVFEIFEGIPQFAISKDELEQ 358

Query: 349 GMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           G+   TL+ + +    S  EA++ ++   + IN   + +   Q+   D  +   I +  G
Sbjct: 359 GIDAATLLAEKSSVFASKGEAKKLIQGGGVSINKEKLKDPTDQLSATDLLNGQFIVVQKG 418

Query: 408 KKNHIICH 415
           KKN+ +  
Sbjct: 419 KKNYYLLT 426


>gi|227873338|ref|ZP_03991599.1| tyrosine--tRNA ligase [Oribacterium sinus F0268]
 gi|227840816|gb|EEJ51185.1| tyrosine--tRNA ligase [Oribacterium sinus F0268]
          Length = 406

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 171/409 (41%), Positives = 242/409 (59%), Gaps = 6/409 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VYEELQERGLIAQVTNEEEIRKMVNEGKAIFYIGFDPTADSLHVGHFMALCLMKRLQAAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R+MM ++ I  N    K   S FI +  G   ALM+N
Sbjct: 63  NKPIALVGGGTGMIGDPSGRSDMRQMMTTEMIDHNCACFKKQMSRFIDFSEG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + +++ LRE+G  FSVN ML      +RL   Q LSF EF+YM++Q YDF  L
Sbjct: 121 NADWLRDMNFMEFLREVGPHFSVNEMLRARCYVNRL--SQGLSFFEFSYMLMQGYDFYRL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C ++ GG DQW N++ G +L  +       A+T  LLT   G KMGKT SGA+WL
Sbjct: 179 YEDYGCNMEFGGDDQWSNMLAGTELIRKKLGKDAHAMTITLLTNKEGKKMGKTASGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSPY+F+QYWRN+DDADV    + LT +PM EI +M   +G E+N+AK+I+A  +T
Sbjct: 239 DAAKTSPYDFYQYWRNVDDADVGKCLRLLTFIPMEEIKKMDAWEGAELNKAKEILAYHLT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG EEA+KA  AA   F    +S + P   + K E   G+ +L L+V +G A S  E
Sbjct: 299 ELVHGAEEAKKAEEAAKSLFAGGGNSANTPKCVLKKAEYPEGIDILNLLVVSGLAPSKGE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR+++   +      I++   Q+ L + ++     L  GKK+ +   L
Sbjct: 359 ARRNVQQGGVSFAGEKITDIGRQLSLSELENEP--LLQKGKKSFMKIVL 405


>gi|307707771|ref|ZP_07644250.1| tyrosyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616269|gb|EFN95463.1| tyrosyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 418

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|322386312|ref|ZP_08059943.1| tyrosine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269679|gb|EFX52608.1| tyrosine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 418

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELQERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVQSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NKEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD + F K  T L + EI+ + K          A+KI+A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +    + ++ ++V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENLNIVEILVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLGDADKLENELTVIRRGKKKYFVLT 417


>gi|228993395|ref|ZP_04153311.1| Tyrosyl-tRNA synthetase 1 [Bacillus pseudomycoides DSM 12442]
 gi|228999442|ref|ZP_04159021.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock3-17]
 gi|229006998|ref|ZP_04164626.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock1-4]
 gi|228754237|gb|EEM03654.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock1-4]
 gi|228760387|gb|EEM09354.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock3-17]
 gi|228766463|gb|EEM15106.1| Tyrosyl-tRNA synthetase 1 [Bacillus pseudomycoides DSM 12442]
          Length = 418

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L  L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLQQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            +   CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQQGCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +A+
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVSEAPEKRAAQKALAS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGAEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVERSAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|149023797|ref|ZP_01836258.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168491625|ref|ZP_02715768.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168577131|ref|ZP_02722951.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169834443|ref|YP_001695461.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225861916|ref|YP_002743425.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229999|ref|ZP_06963680.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254073|ref|ZP_06977659.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501598|ref|YP_003723538.1| tyrosine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|307128359|ref|YP_003880390.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|254783643|sp|B1I9G6|SYY_STRPI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783649|sp|C1CU03|SYY_STRZT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147929593|gb|EDK80586.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168996945|gb|ACA37557.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|183574103|gb|EDT94631.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183577264|gb|EDT97792.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225726447|gb|ACO22298.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237193|gb|ADI68324.1| tyrosine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|306485421|gb|ADM92290.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332198522|gb|EGJ12605.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 418

 Score =  368 bits (944), Expect = e-99,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 227/420 (54%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|168486915|ref|ZP_02711423.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168494146|ref|ZP_02718289.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183570135|gb|EDT90663.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183575898|gb|EDT96426.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 418

 Score =  368 bits (944), Expect = e-99,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 227/420 (54%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEESYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|315924164|ref|ZP_07920390.1| tyrosine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622566|gb|EFV02521.1| tyrosine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 413

 Score =  368 bits (944), Expect = e-99,   Method: Composition-based stats.
 Identities = 172/403 (42%), Positives = 243/403 (60%), Gaps = 7/403 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  ++  L   G    YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 9   IYEELVARGLIAQVTDEPQIKELIDNGGAKFYIGFDPTADSLHVGHFMALCLMRRLQQAG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++P+ L+GGGT+ IGDPS R + R+MM ++ I  N+   K   S FI++G     A++++
Sbjct: 69  NRPVVLIGGGTAHIGDPSGRTDLRQMMTTETIAHNVACFKKQMSRFIEFGED--KAILVD 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D +R+IG+ FSVN ML  E  + RL  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 127 NADWLLDLNYVDTIRDIGAHFSVNNMLRAECYKQRL--EKGLSFLEFNYMIMQAYDFYHL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y   +Q GG+DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 185 HKAYGVNMQFGGNDQWSNMLAGTELIRRKLGEDAYAMTITLLLNSEGKKMGKTAKGAVWL 244

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + + TSP++F+QYWRN+DDADV+   K LT LP+ EI+ MA      INE K+I+A E+T
Sbjct: 245 DPDKTSPFDFYQYWRNVDDADVMKCLKMLTFLPLDEIEAMANWPDNRINEEKEILAYELT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFATSTN 366
            +VHG EEA+KA   A   F  S     MPT  I +D +    +GL+ L+V  G A S +
Sbjct: 305 ALVHGEEEAKKAQHTAKSLFAGSGSDADMPTSEIGEDVLTEDAIGLIDLLVATGLAPSKS 364

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           EARR +K N I ++   ++++   I  +   +   I +  GKK
Sbjct: 365 EARRLIKQNGISVDGVKVNDQNASIGRERLMAG--ITVKKGKK 405


>gi|330838923|ref|YP_004413503.1| Tyrosyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746687|gb|AEC00044.1| Tyrosyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 406

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 257/410 (62%), Gaps = 7/410 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++   +L ERGFI Q ++   +  L  +  VT Y G+D TA SLH GH   LM +  +Q
Sbjct: 1   MANVFDVLKERGFIAQCTDEEGVRELLGKESVTFYTGFDPTADSLHVGHFLGLMAMSHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P+ L+GGGT  +GDPS R + RRM+  ++I+ N +  K   + FI +  G   AL
Sbjct: 61  RAGHRPVCLVGGGTGTVGDPSGRTDMRRMLTDEDIEHNCDCFKKQIARFIDFSEG--KAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + YI+LLRE+G+ F+VNRMLS E+ ++R   E+ L+FLEFNYM++QAYDF
Sbjct: 119 MVNNGDWLRKLNYIELLREVGAHFTVNRMLSAEAYKTRW--EKGLTFLEFNYMVMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL+    C+LQMGG DQW NII G++L  R +    + LT  LLT + G KMGKT  GA
Sbjct: 177 LELSHRCGCKLQMGGDDQWSNIIAGVELIRRKEAKPAYGLTFTLLTKSDGQKMGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY+F+QYWRNIDDADV      LT LPM E+ R+  L+   INEAK ++A 
Sbjct: 237 LWLDAEKTSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALRDAAINEAKTVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG  EA+KA   A   F     S  +PT +++ +E+  G  LL ++ K G  +S
Sbjct: 297 EVTKLVHGEAEAKKAKEGAEAMFGRGAASAELPTFTLTAEEM--GAKLLDILAKNGVFSS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +E RR +    + +N++ +++   +++ +DF S G   +  GKK H   
Sbjct: 355 KSEGRRLISQGGVTLNDARVTDADYRLQEEDF-SDGTALVKKGKKKHYRL 403


>gi|119960707|ref|YP_947409.1| tyrosyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119947566|gb|ABM06477.1| tyrosyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 436

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 227/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++  EL+ L +   +T Y G+D TA SLH G+L QL+++  LQ  
Sbjct: 18  NVWQELKWRGLVHVSTDETELEKLLAGDPITYYCGFDPTAPSLHLGNLVQLLVMRRLQLA 77

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDP      R +     + E +  ++G    F+ +  G+  A M+
Sbjct: 78  GHKPLGLVGGSTGLIGDPRP-TAERTLNTKDTVAEWVGYLQGQVRRFLSFE-GENPARMV 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LREIG  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ  D+++
Sbjct: 136 NNLDWTAPLSAIDFLREIGKHFRVGTMLRKDAVASRLSSDEGISYTEFSYQILQGMDYLQ 195

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+T + GTK GK+   AIW
Sbjct: 196 LFRDYGCALQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLITNSDGTKFGKSEGNAIW 255

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+ +M SPY F+Q+W N  DADVV   K  T L  +EI+    A  +     E +K +A 
Sbjct: 256 LDPDMCSPYTFYQFWLNTADADVVDRLKVFTFLSRAEIEALGQAVEERPFAREGQKKLAF 315

Query: 305 EITTMVHGREEAEKAATAAMECFDMS------IHSQHMPTISISKDEV-SRGMGLLTLIV 357
           E+T++VHG +  EK   A+   F           +    T  +    + + G+G++ L+V
Sbjct: 316 EVTSLVHGVDATEKVIAASAALFGNGDLAVLDERTLEAATAELPSATIGADGLGIIDLLV 375

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G + S + ARR +      +NN+ +S+    I  ++      + L  GKKN     + 
Sbjct: 376 ASGLSDSKSAARRTVGEGGAYVNNTKVSDPDAVIAREELLHGRYLLLRRGKKNLATIEVS 435


>gi|227833163|ref|YP_002834870.1| Tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454179|gb|ACP32932.1| Tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 461

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 146/421 (34%), Positives = 223/421 (52%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   QK 
Sbjct: 44  NIIDELQWRGLINQSTDLDALREAC-EEPITLYCGFDPTGDSLHAGHLVPMIMLRRFQKA 102

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP      R M+  + I +N+  IK     FI +  G+  A M+
Sbjct: 103 GHHPIALAGGATGQIGDPRDVG-ERTMLSQETINDNMVAIKKQLRQFIDFA-GENAATMV 160

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V 
Sbjct: 161 NNADWTSKMTVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVH 219

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L   +DC LQ+GG DQWGNI+ G+DL  R+K  K+  LT PL+T A G K GK+  G  +
Sbjct: 220 LHDEFDCILQIGGGDQWGNIVSGVDLNRRVKGAKVHGLTVPLVTDAQGQKFGKSTGGGKL 279

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E TSPY+++QY+ N  D+ V+ + +  T L   EI    +   +     EA++ +A
Sbjct: 280 WLDPEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQEEIAEYEQKVAEEPFRREAQRRLA 339

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    A    F  +  +          +   +++         ++ L
Sbjct: 340 QEMTNLVHGEEATKSVKLATQALFGKAELADLDEQTLVGALSETTVADIAAGEPRTIVDL 399

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G A S   ARR +K     +NN  I +++ +   +D      + L  GKKN     
Sbjct: 400 LVACGLADSKGAARRTIKEGGAYVNNQRIESDEWEPAAEDLLHGAWLVLRRGKKNFAGAK 459

Query: 416 L 416
           L
Sbjct: 460 L 460


>gi|258450877|ref|ZP_05698930.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257861413|gb|EEV84221.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5948]
          Length = 420

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 228/428 (53%), Gaps = 23/428 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L
Sbjct: 1   MTNV---LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT  
Sbjct: 58  RRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDH 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQ
Sbjct: 118 -GAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGK 239
           A DF  L +  +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK
Sbjct: 175 AIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + SGA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + E
Sbjct: 235 SESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLRE 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS 347
           A+K +A E+T  +HG +    A   +   F                + +P +++S    +
Sbjct: 295 AQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKGGFKDVPQVTLS----N 350

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ ++++ G + S  +AR  + + AI IN     +    +  +D        +  G
Sbjct: 351 DTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRG 410

Query: 408 KKNHIICH 415
           KK + + +
Sbjct: 411 KKKYFMVN 418


>gi|229147228|ref|ZP_04275585.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST24]
 gi|228636237|gb|EEK92710.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST24]
          Length = 418

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQVLDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|269219360|ref|ZP_06163214.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211153|gb|EEZ77493.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 420

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 223/421 (52%), Gaps = 9/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG I Q ++   L    ++G VT Y G+D TA+SLH GHL  + ++  LQ
Sbjct: 1   MTDILDELQWRGLIAQHTDIDALRAALAEGPVTFYCGFDPTAASLHHGHLVAVKVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDPS R E R +  +  +      ++G   S + +  G+  A 
Sbjct: 61  MAGHNPLALVGGATGLIGDPSGRKEERNLNEADVVAGWAAALRGQLESLLDFE-GEHPAR 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  ID LR+IG  F +  MLS ++V  RL+ ++ +SF EF+Y ILQA D+
Sbjct: 120 IVNNLDWTGPMSTIDFLRDIGKNFRLGTMLSKDTVARRLESDEGISFTEFSYQILQANDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GKT  GA
Sbjct: 180 LQLYRRYGCTLEVGGNDQWGNLVGGMDLIRKVEGESVHVMTNPLITKSDGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN EM SPY F+Q+W N  D DV+   K  T     EI  +     +     EA+K +
Sbjct: 240 IWLNPEMFSPYRFYQFWLNTADDDVIHMLKVFTFRTREEIAELETALAERPHAREAQKAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A ++TT VHG +  E+   A+   F                   + + E S G  L+ L 
Sbjct: 300 AEDVTTWVHGADATERVKAASRALFGGGGLESLDARTLADAVAELPRAEGSVGTPLIELF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G       ARR + S  + +NN  I +    +   D    G + L  GKKN  +  +
Sbjct: 360 VATGLEKGLGAARRTVASGGLYLNNVKIDDGAKVLGSSDLLPGGVVLLRRGKKNLAVVGV 419

Query: 417 C 417
            
Sbjct: 420 V 420


>gi|304440653|ref|ZP_07400537.1| tyrosine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370840|gb|EFM24462.1| tyrosine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 427

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 166/413 (40%), Positives = 253/413 (61%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + + IL ERGFI Q+++  EL  L  +  V  YIG+D TA SL  GH  Q+ ++  +Q
Sbjct: 20  KMNVIDILEERGFIDQMTHEEELRDLLGKEKVKFYIGFDATADSLTLGHFLQIRVMQHMQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GGGT++IGDPS +++ R++M    I  N E  +   S F+ +  G    +
Sbjct: 80  NAGHIPVALLGGGTTMIGDPSGKNDMRKVMTEDFINHNAECFRKQISHFLDFSEG--KGI 137

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN+ WL  +K++  +REIG  FSVNRML+F+  ++R+  E  L+F EF YM++Q+YDF
Sbjct: 138 IENNKDWLLDLKFLPFMREIGVHFSVNRMLNFDCYKNRM--ENGLTFFEFGYMLMQSYDF 195

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + +  +L++GGSDQW NII G +L  +L++  +F +T  LLTTASG KMGK+  GA
Sbjct: 196 LYLYRKHGVKLELGGSDQWSNIIGGYELVRKLESDLVFGMTFKLLTTASGQKMGKSEKGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL++E TSPY  +QY RN DD DV+ F K LT LP+ +I    KL+G+E+N+AK+++A 
Sbjct: 256 IWLDREKTSPYEMFQYLRNSDDRDVIKFLKLLTMLPLEKIAEYEKLEGQELNKAKEVLAF 315

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+   VHG E A++A  A+   F     S+++P   + +     G+G+L L+ K     S
Sbjct: 316 EVVKDVHGEEAAKEALEASKALFQGGADSENIPNEDMDRKIFEEGIGILDLMTKLNLTKS 375

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +EARR ++   + I+   + +  L +K   F     I +  GKK H    L 
Sbjct: 376 NSEARRLIQGGGVSIDGEKVQDPNLVVKADMFKDDK-IIIQKGKKVHQRITLV 427


>gi|307705759|ref|ZP_07642604.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620677|gb|EFN99768.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 418

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVNGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI-------SKDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNHQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLTDADKLENELTVIRRGKKKYFVLT 417


>gi|260438865|ref|ZP_05792681.1| tyrosine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292808704|gb|EFF67909.1| tyrosine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 405

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 180/410 (43%), Positives = 251/410 (61%), Gaps = 8/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYEELQARGLIAQVTDEPLIRDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R++ R MM  + I  N+E  K   S FI +      AL++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRNDMRSMMTKETINHNVECFKKQMSRFIDFSDD--KALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+DLLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q++DF  L
Sbjct: 121 NADWLLDLNYVDLLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSFDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YQKYGCNLQFGGDDQWSNMLGGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSPY F+QYWRN+DDADV+   K LT LP+SEI++MA  +G ++NEAK+I+A E+T
Sbjct: 239 DPEKTSPYEFFQYWRNVDDADVIKCLKMLTFLPLSEIEKMANWEGSQLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG+EEAEKA  +A   F       +MPT ++  D    G + L+TL+V  G   + +
Sbjct: 299 ALVHGKEEAEKAKESARSVFGAGDA-SNMPTATVDDDCFKDGEVDLITLLVAGGLCQTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +ARR+++   + +N    ++ K      +F     I +  GKKN     L
Sbjct: 358 DARRNIEQGGVTVNGEKETDFKKTYTKDNFGDG--IVIKRGKKNFKKLVL 405


>gi|332522596|ref|ZP_08398848.1| tyrosine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332313860|gb|EGJ26845.1| tyrosine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 420

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 226/421 (53%), Gaps = 17/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E   KIKG  S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKETVLEWSAKIKGQLSQFLDFENGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRRKSDKIGHVMTVPLITDASGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +     +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLQEIAEIEEAFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+ T+VHG E  ++A     + F  +I             ++P  ++  D+    + ++ 
Sbjct: 300 EVVTLVHGEEAYKQAVNITEQLFAGNIKQLSAKELRQGLSNVPNYAVQTDD---NLNIVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V +  ++S  +AR  +++ AI IN   +S+    +   D        +  GKK + + 
Sbjct: 357 ILVSSKISSSKRQAREDVQNGAIYINGERVSDLNYVLSDTDKIEGQLTVIRRGKKKYFVL 416

Query: 415 H 415
            
Sbjct: 417 T 417


>gi|322410926|gb|EFY01834.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 419

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 142/418 (33%), Positives = 221/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNNKHNITLQIGGSDQWGNMTAGTELLRRKADKTCHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L ++EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLNEIADIENQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-------GMGLLTLIV 357
           E+ T+VHG E  ++A     + F  ++ +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNVQNLSANELKQGLSNVPNYHVQSADSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   +      +   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGERVQELDYTLSDTDKIDNQLTVVRRGKKKYAVLK 417


>gi|322388579|ref|ZP_08062179.1| tyrosine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140499|gb|EFX36004.1| tyrosine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 418

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELMRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDTDKLENELTVIRRGKKKYFVLT 417


>gi|257470783|ref|ZP_05634873.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064988|ref|ZP_07929473.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690664|gb|EFS27499.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 406

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 174/412 (42%), Positives = 255/412 (61%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L  RG++ Q ++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MENVFDVLVGRGYLKQFTHEEEMREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMSHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT++IGDPS R + R MM  + I  N+  IK     FI +  G   A+
Sbjct: 61  KHGHRPIALLGGGTAMIGDPSGRTDMRTMMSKETIAHNVASIKKQMEKFIDFSDG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL  + Y+D +R+IG+ FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF
Sbjct: 119 LENNADWLLGLNYVDFIRDIGAHFSVNRMLAAECFKSRM--EAGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA
Sbjct: 177 LVLNQKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+DDADV      LT +PM E+ R++ L+G EINEAKKI+A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFIPMDEVKRLSALEGAEINEAKKILAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT M+HG EEA KA TAA   F       ++P++ I +  +  G GL+  +V+ G   +
Sbjct: 297 EITKMIHGEEEALKAKTAAEALFGGGQDMSNVPSVEIEESAL--GTGLVDFLVEKGILKT 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR ++ N + + +S +++  + I  + F     +    GKK +    L
Sbjct: 355 KSEGRRLVQQNGLNVGDSKVTDFAMPITKELFTDGEFLV-KIGKKKYHKVVL 405


>gi|15924719|ref|NP_372253.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927306|ref|NP_374839.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283400|ref|NP_646488.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483969|ref|YP_041193.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486553|ref|YP_043774.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82751316|ref|YP_417057.1| tyrosyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87162035|ref|YP_494369.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195539|ref|YP_500345.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268207|ref|YP_001247150.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394275|ref|YP_001316950.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221834|ref|YP_001332656.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156980046|ref|YP_001442305.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509944|ref|YP_001575603.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142363|ref|ZP_03566856.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315098|ref|ZP_04838311.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255006514|ref|ZP_05145115.2| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257425842|ref|ZP_05602266.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428508|ref|ZP_05604906.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431142|ref|ZP_05607519.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433824|ref|ZP_05610182.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436741|ref|ZP_05612785.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794112|ref|ZP_05643091.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415816|ref|ZP_05682087.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420645|ref|ZP_05683584.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438295|ref|ZP_05689579.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443753|ref|ZP_05692092.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445964|ref|ZP_05694140.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448309|ref|ZP_05696436.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454164|ref|ZP_05702135.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262049041|ref|ZP_06021919.1| tyrosyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051808|ref|ZP_06024025.1| tyrosyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203367|ref|YP_003282636.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893223|ref|ZP_06301457.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904298|ref|ZP_06312186.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906123|ref|ZP_06313978.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909039|ref|ZP_06316857.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911354|ref|ZP_06319156.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914523|ref|ZP_06322309.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282916989|ref|ZP_06324747.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282919491|ref|ZP_06327226.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924419|ref|ZP_06332092.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924869|ref|ZP_06332535.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283770807|ref|ZP_06343699.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283958478|ref|ZP_06375929.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024775|ref|ZP_06379173.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503601|ref|ZP_06667448.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510617|ref|ZP_06669322.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537158|ref|ZP_06671838.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294849890|ref|ZP_06790629.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406039|ref|ZP_06815847.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428298|ref|ZP_06820927.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296276633|ref|ZP_06859140.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207559|ref|ZP_06923994.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245035|ref|ZP_06928912.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297590739|ref|ZP_06949377.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300911640|ref|ZP_07129084.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380679|ref|ZP_07363350.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81649151|sp|Q6G8J9|SYY_STAAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81650917|sp|Q6GFX9|SYY_STAAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81704346|sp|Q7A0M7|SYY_STAAW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81705530|sp|Q7A537|SYY_STAAN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81781424|sp|Q99TD5|SYY_STAAM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97202012|sp|Q2FG09|SYY_STAA3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97202017|sp|Q2YTG1|SYY_STAAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123407035|sp|Q2FXJ5|SYY_STAA8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029772|sp|A7X3G2|SYY_STAA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029773|sp|A6U2J5|SYY_STAA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029774|sp|A5ITQ1|SYY_STAA9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029775|sp|A6QHR2|SYY_STAAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029776|sp|A8Z2P6|SYY_STAAT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16975033|pdb|1JII|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           219383
 gi|16975034|pdb|1JIJ|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           239629
 gi|16975035|pdb|1JIK|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           243545
 gi|16975036|pdb|1JIL|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With
           Sb284485
 gi|13701524|dbj|BAB42818.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247501|dbj|BAB57891.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204840|dbj|BAB95536.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49242098|emb|CAG40797.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244996|emb|CAG43457.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82656847|emb|CAI81276.1| tyrosyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87128009|gb|ABD22523.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203097|gb|ABD30907.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741276|gb|ABQ49574.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946727|gb|ABR52663.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374634|dbj|BAF67894.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722181|dbj|BAF78598.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368753|gb|ABX29724.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257271536|gb|EEV03682.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275349|gb|EEV06836.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278090|gb|EEV08738.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281917|gb|EEV12054.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284092|gb|EEV14215.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788084|gb|EEV26424.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839409|gb|EEV63882.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843249|gb|EEV67659.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848339|gb|EEV72330.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851159|gb|EEV75102.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855206|gb|EEV78145.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858548|gb|EEV81424.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863616|gb|EEV86373.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160302|gb|EEW45329.1| tyrosyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162858|gb|EEW47422.1| tyrosyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075657|gb|ACY11630.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941207|emb|CBI49595.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313235|gb|EFB43631.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317301|gb|EFB47675.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282319476|gb|EFB49828.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282321704|gb|EFB52029.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325049|gb|EFB55359.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327303|gb|EFB57598.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331415|gb|EFB60929.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282592920|gb|EFB97923.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595916|gb|EFC00880.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764541|gb|EFC04667.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283460954|gb|EFC08044.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283470994|emb|CAQ50205.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|283790627|gb|EFC29444.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817411|gb|ADC37898.1| Tyrosyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290920003|gb|EFD97071.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095267|gb|EFE25532.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466508|gb|EFF09029.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294823229|gb|EFG39659.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294969036|gb|EFG45057.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295127698|gb|EFG57335.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887576|gb|EFH26474.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178115|gb|EFH37363.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297575625|gb|EFH94341.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300887061|gb|EFK82262.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333393|gb|ADL23586.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751555|gb|ADL65732.1| tyrosyl-tRNA synthetase, TyrS [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340786|gb|EFM06715.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437815|gb|ADQ76886.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830107|emb|CBX34949.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130634|gb|EFT86620.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195633|gb|EFU26020.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315197197|gb|EFU27536.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141672|gb|EFW33507.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143826|gb|EFW35599.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323440726|gb|EGA98435.1| tyrosyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442966|gb|EGB00588.1| tyrosyl-tRNA synthetase [Staphylococcus aureus O46]
 gi|329314402|gb|AEB88815.1| Tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329726966|gb|EGG63423.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329727191|gb|EGG63647.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329733062|gb|EGG69399.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 420

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 228/428 (53%), Gaps = 23/428 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L
Sbjct: 1   MTNV---LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT  
Sbjct: 58  RRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDH 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQ
Sbjct: 118 -GAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGK 239
           A DF  L +  +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK
Sbjct: 175 AIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + SGA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + E
Sbjct: 235 SESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLRE 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS 347
           A+K +A E+T  +HG +    A   +   F                + +P +++S    +
Sbjct: 295 AQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLS----N 350

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ ++++ G + S  +AR  + + AI IN     +    +  +D        +  G
Sbjct: 351 DTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRG 410

Query: 408 KKNHIICH 415
           KK + + +
Sbjct: 411 KKKYFMVN 418


>gi|229492662|ref|ZP_04386463.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229320321|gb|EEN86141.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 429

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 224/421 (53%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 8   NILDELTWRGLIAQSTDLDALRKDLEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G++PI L GG T +IGDP      R M  +  + +   +I+G    F+ +    T A++ 
Sbjct: 68  GNRPIVLAGGATGLIGDPRDVG-ERTMNSADTVADWAGRIRGQLERFVDFDDSPTSAVIE 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++ 
Sbjct: 127 NNMNWTGKMSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQANDYLH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAI 245
           L ++  C LQ+GGSDQWGNII G++L  R+    + A+T PL+T+A G K GK+   G++
Sbjct: 186 LRRDLGCTLQVGGSDQWGNIIAGVELNRRVDGESVHAMTVPLVTSADGKKFGKSTGGGSL 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +     +     EA+K +A
Sbjct: 246 WLDPEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTADELAELETATAERPHAREAQKRLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG         A+   F  +  ++         +   S+S+        ++ L
Sbjct: 306 AEMTTLVHGEHNTRAVELASQALFGKAELAELDESTLAAALKEASVSELAPGEPRTIIDL 365

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S   ARR +K     +NN  +S +  +    D      + +  GK+N     
Sbjct: 366 LVTSGLCESKGAARRAVKEGGASVNNQKVSADDWEPTASDLLHGSWLVVRRGKRNFAGVK 425

Query: 416 L 416
           +
Sbjct: 426 I 426


>gi|322378015|ref|ZP_08052502.1| tyrosine--tRNA ligase [Streptococcus sp. M334]
 gi|321280997|gb|EFX58010.1| tyrosine--tRNA ligase [Streptococcus sp. M334]
          Length = 418

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 150/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+  R           A+KI+A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEVAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV--SRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +      +   +V       ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQEDENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|87200116|ref|YP_497373.1| tyrosyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|97201733|sp|Q2G6I4|SYY_NOVAD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|87135797|gb|ABD26539.1| tyrosyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 409

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 203/415 (48%), Positives = 279/415 (67%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  + S  L +LSERG+IHQ+++   LD L ++ V+  YIG+D TA SLH G + Q+MLL
Sbjct: 1   MTEYASSLLRLLSERGYIHQMTDADALDALAAKQVIPGYIGFDPTAPSLHVGSMVQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R++M +  I  N+  IK +F  F+ +G G 
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLMTNDVIAANVASIKTVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  ++YI  LRE+G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNADWLDRLEYIPFLREVGQHFSVNRMLSFDSVKQRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF EL++ + CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PLLTTA G+KMGKT
Sbjct: 181 AYDFRELSQRHACRLQMGGSDQWGNIVNGIELTRRMDGVEVFGVTTPLLTTADGSKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN++    ++FWQYWRN DD DV  F +  T LP+ EI R+  L+G EIN AK 
Sbjct: 241 AAGAVWLNEDALPAWDFWQYWRNTDDRDVGKFLRLFTDLPLDEIARLEALEGSEINAAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T +V G E A+ A   A   F      Q +PT+S+ + E    +G++  +V  G
Sbjct: 301 VLANEVTRLVRGEEAAKAAEATAAATFAGGGLGQDLPTLSVGESE----IGIVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           FA S  EA+R +     +++   +++E  +I      +   I++S GKK H I  
Sbjct: 357 FAASRGEAKRLVAGGGARVDGEPVTDEGFRI----LVNDKEIRVSSGKKKHGILR 407


>gi|260061604|ref|YP_003194684.1| tyrosyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785736|gb|EAR16905.1| tyrosyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 433

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 156/431 (36%), Positives = 232/431 (53%), Gaps = 23/431 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++F+  L  RG +H +    E       G+  AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MATNFVKELEWRGMLHDVMPGTE--EHLLSGMQAAYVGIDPTADSLHIGHLVGVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q  GHKPI L+GG T +IGDPS +   R ++    ++ N E IK   S F+ + +  +  
Sbjct: 59  QMAGHKPIGLVGGATGMIGDPSGKSAERNLLDETTLRMNQEAIKMQLSRFLDFESDAENA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A+++NN  W+  I ++D +R++G   +VN M++ +SV+ R+  E  + +SF EF Y ++Q
Sbjct: 119 AVLVNNYDWMKDITFLDFIRDVGKHITVNYMMAKDSVKKRVSDESGEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L + Y+C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLYRKYNCTLQMGGSDQWGNITTGTELIRRIDGGKGYALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
            SG +WL+   TSPY F+QYW N  D D   + K  T L   EI+       +     E 
Sbjct: 239 ESGNVWLDAHKTSPYKFYQYWLNTSDEDAEKYIKIFTFLSREEIEGLVAEHREAPHKREL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           ++ +A E+TTMVH R++ E A TA+   F  S                 + +P   +   
Sbjct: 299 QRRLAEELTTMVHSRQDLENAVTASSILFGKSTAESLRSLGEETFMEVFEGVPQCHLPIG 358

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++  +    GF  S  EA R LK NAI +N + + +    I  +D  S   + 
Sbjct: 359 DIESGLDMVAALSARTGFLKSNGEALRELKQNAISVNKAKVDD-SYTITEKDLISGKFVL 417

Query: 404 LSFGKKNHIIC 414
           L  GKKN+ + 
Sbjct: 418 LQRGKKNYFVL 428


>gi|25010229|ref|NP_734624.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457837|sp|Q8E7K0|SYY_STRA3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23094581|emb|CAD45799.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|319744102|gb|EFV96477.1| tyrosine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 419

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 148/418 (35%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFDELKERGLVFQTTDEDALRKALEEGSVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIV 357
           E+ T+VHG +  ++A     + F  +I    +  +            +    + ++ L+V
Sbjct: 300 EVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + +
Sbjct: 360 TSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLN 417


>gi|291515289|emb|CBK64499.1| tyrosyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 434

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 136/430 (31%), Positives = 222/430 (51%), Gaps = 23/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG IH I           +   TAY+G D TA SLH GHL  +M+L   Q 
Sbjct: 4   KNFIEELEWRGMIHTIMPGA--KEQLEKEQTTAYLGIDPTADSLHIGHLVGVMILKHFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GH+P++L+GG T +IGDPS + + R ++  + ++ N E IK   +  + + +     A 
Sbjct: 62  CGHRPLALVGGATGMIGDPSGKSQERNLLDEKTLRHNQEAIKRQLAKLLDFDSDAPNAAA 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  W+    ++D +R+IG   +VN M++ +SV+ R       +SF EF Y ++Q YD
Sbjct: 122 LVNNYDWMKEFTFLDFIRDIGKCITVNYMMAKDSVKKRFNGEGDGMSFTEFTYQLVQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L +  +C++Q+GG+DQWGNI  G +L  R      + F +T PL+T A GTK GKT 
Sbjct: 182 FLHLYETMNCKIQLGGADQWGNITTGTELIRRKLGAEAEAFGITCPLITKADGTKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAK 299
           SG +WL+   TSPY F+Q+W N+ D D   + K  T L    ID +         +   +
Sbjct: 242 SGNVWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTLLDRETIDALIAEHDAAPHLRVLQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDE 345
           K +A EIT M+H REE EKA  A+   F  +                 + +P   +++ E
Sbjct: 302 KRLAEEITCMIHSREEYEKAVEASAILFGGATSEALRRLDEQTLLQVFEGVPQYRVARTE 361

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++ G+  + L  + +    S  E R+ ++   + +N   +++    +   D  +   + +
Sbjct: 362 LAAGIPFVDLCAEKSDIFASKGECRKLVQGGGVSLNKEKLADAMRPVTDADLIAGKYLLV 421

Query: 405 SFGKKNHIIC 414
             GKKN+ + 
Sbjct: 422 QRGKKNYYLV 431


>gi|57652027|ref|YP_186612.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|81694288|sp|Q5HF45|SYY_STAAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57286213|gb|AAW38307.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
          Length = 420

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 228/428 (53%), Gaps = 23/428 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L
Sbjct: 1   MTNV---LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT  
Sbjct: 58  RRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQIHNIFEFGTDH 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQ
Sbjct: 118 -GAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGK 239
           A DF  L +  +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK
Sbjct: 175 AIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + SGA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + E
Sbjct: 235 SESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLRE 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS 347
           A+K +A E+T  +HG +    A   +   F                + +P +++S    +
Sbjct: 295 AQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLS----N 350

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ ++++ G + S  +AR  + + AI IN     +    +  +D        +  G
Sbjct: 351 DTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRG 410

Query: 408 KKNHIICH 415
           KK + + +
Sbjct: 411 KKKYFMVN 418


>gi|51473738|ref|YP_067495.1| tyrosyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81390039|sp|Q68WH9|SYY_RICTY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51460050|gb|AAU04013.1| L-tyrosine-tRNATyr ligase (AMP-forming) [Rickettsia typhi str.
           Wilmington]
          Length = 411

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 178/409 (43%), Positives = 267/409 (65%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G++HQ ++  +L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFIYKGYLHQCTDLDQLTAITQEVKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI ++GGGTS IGDPS ++ +R+ +  ++I+ N   IK   S FIK+G  + DA++L+
Sbjct: 63  HTPIVIIGGGTSKIGDPSGKEVTRKALTQEDIKRNTAGIKKSLSKFIKFGKDQGDAIILD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ G  FSVNRML+ +SV+ RL+R   LSFLE NYM+LQAYDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGRHFSVNRMLTMDSVKLRLERSHHLSFLELNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  R+   ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKHYNCILQLGGSDQWGNIVIGADLIRRISGKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L + E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLYSELDIIELNKFEHLVSEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   A+ A   A+  F+     +++ T  ++ + +  G+    L      A S +E
Sbjct: 303 KLCHGERLAKLALETAVRIFEQGDIDENLHTFILAPEILQAGISAYKLFYNVNLARSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKIIRGKGAKINDQLVEDENMTIDTNFLLDKKVIKLSVGKKRHILVKV 411


>gi|326201599|ref|ZP_08191470.1| methyl-accepting chemotaxis sensory transducer [Clostridium
           papyrosolvens DSM 2782]
 gi|325988199|gb|EGD49024.1| methyl-accepting chemotaxis sensory transducer [Clostridium
           papyrosolvens DSM 2782]
          Length = 407

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 170/410 (41%), Positives = 243/410 (59%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEEEIRELINSGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KP+ L+GGGT  IGDPS R + R MM  + IQ N +  K     FI++G     A+M+N
Sbjct: 63  NKPVVLLGGGTGYIGDPSGRTDLRSMMTPETIQHNCDCFKKQMERFIEFGDD--KAIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+LLR++G+ FSVN ML  E  + R+  E+ LSFLE NYMI+Q+YDF  L
Sbjct: 121 NADWLLKLNYIELLRDVGAHFSVNNMLRAECYKQRM--EKGLSFLELNYMIMQSYDFYYL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +NY C +Q GG+DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YQNYGCNMQFGGNDQWSNMLGGTELIRRKLGKDAYAMTITLLMNSEGNKMGKTAKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTTPFEFYQYWRNVGDADVLKCIRMLTFLPLEQIDAMDKWKGSQLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            ++H  EEA+KA  A+   F       HMPT  I  + +  G +G+L LI       S +
Sbjct: 299 KLIHDEEEAQKAKDASHALFAAGTDDSHMPTTEIEVEHLVDGVIGILDLITACRLTASKS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   I IN++ + +    I  +   +   +K+  GKK +    +
Sbjct: 359 EARRLIQQGGIFINDAKVESIDCNITSKQLKNG--VKIRKGKKTYHKVLI 406


>gi|269793163|ref|YP_003318067.1| tyrosyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100798|gb|ACZ19785.1| tyrosyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 425

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 232/421 (55%), Gaps = 12/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + +   +LS RG +   S P EL  L +  +VT Y+G+D +A SLH G++  +M L WLQ
Sbjct: 3   RDNPFEVLSRRGLVEWCSAPEELSQLFASEMVTGYVGFDPSADSLHVGNMVPIMGLAWLQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++++GGGT +IGDPS + + R ++   ++  N+E I+   S F+ +      A+
Sbjct: 63  RLGHRPLAIVGGGTGLIGDPSGKSKERPLLTHDQVVHNMECIREQLSLFLDFDRTPNGAV 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           +LNN  WL     I  LR+   FF+VN M+S E VRSRL+  + S+++ E +YM+LQA+D
Sbjct: 123 ILNNYDWLKDQSLIGFLRDTAKFFTVNYMISREYVRSRLEDPEKSITYTEMSYMLLQAFD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y C+LQMGG+DQ GNI+ G+DL  + +  + F  T PLL T++G K GK+  G
Sbjct: 183 FWHLYRTYGCKLQMGGNDQQGNILAGVDLIRKKEGGQAFGFTFPLLLTSTGQKFGKSEEG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A++L+ + TSPY F+Q+W N++D  +    +  T L    ID +        E   A++ 
Sbjct: 243 AVYLSPKRTSPYKFYQFWMNVEDQALGKLFRMYTFLEEERIDEIVSRHLASPENRSAQRE 302

Query: 302 IATEITTMVHGREEAEKAATAAME------CFDMSIHSQHMPTISISKDE--VSRGMGLL 353
           +A E+T+ VHG + A + A A+          D    S  +    +      ++ G  ++
Sbjct: 303 MAMEMTSRVHGEQVARRVAKASEMLFGDYDFRDAQEESLSILEGEVPTSRLGLNCGETVV 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V AG   S  EARR LK   + +N   + +E   ++  D           GKK + +
Sbjct: 363 DVMVSAGICPSKGEARRLLKGGGVYLNGQRV-DEGRTLEEGDLMFQRYALFRIGKKRYHL 421

Query: 414 C 414
            
Sbjct: 422 V 422


>gi|253578840|ref|ZP_04856111.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849783|gb|EES77742.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 409

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 249/398 (62%), Gaps = 6/398 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VWDELKARGLIAQVTDEEEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R+MM  + IQ NI+  K     FI +  G   ALM+N
Sbjct: 63  NKPIALLGGGTGMIGDPSGRSDMRQMMTVETIQHNIDCFKKQMERFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+++LR++G  FSVNRMLS E  + R+  E+ L+FLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMNLNYVEVLRDVGPHFSVNRMLSHECYKQRM--ERGLTFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCTMQFGGDDQWANMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+DDADV+   + LT LP+ EID MAK +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFDFYQYWRNVDDADVIKCMRLLTFLPLEEIDEMAKWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
            +VHG EEA+KA   A   F     + HMPT  ++ ++ S    + L++++VKAG   + 
Sbjct: 299 NLVHGEEEAKKAQEGARALFAGGADTAHMPTTELADEDFSEEGTIDLISMLVKAGMVPTR 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +E RR ++   + I+   I++ K  +        G + 
Sbjct: 359 SEGRRAIEQGGVSIDGEKITDVKYTVAKDALTGEGVVL 396


>gi|283795463|ref|ZP_06344616.1| tyrosine--tRNA ligase [Clostridium sp. M62/1]
 gi|291077125|gb|EFE14489.1| tyrosine--tRNA ligase [Clostridium sp. M62/1]
 gi|295114815|emb|CBL35662.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 407

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 173/410 (42%), Positives = 250/410 (60%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIKNMVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEIIQHNCDCFKKQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLGLNYVELLREVGPHFSVNRMLTAECYKQRM--ERGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCLRMLTFLPLEQIDEMDQWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F    ++ +MPT  + +++ + G + +L+++ K+G A S +
Sbjct: 299 ALVHGEEEAVKAQEASRALFTSG-NAANMPTAKLKEEDFADGSIDILSILQKSGLAPSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   + ++   + + K           G + +  GKKN     L
Sbjct: 358 EARRNVEQGGVSVDGVQVKDIKAAFTKDQLSGEG-VVVKRGKKNFKRVVL 406


>gi|22536342|ref|NP_687193.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798581|ref|ZP_00780811.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77409650|ref|ZP_00786321.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|81455406|sp|Q8E241|SYY_STRA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22533167|gb|AAM99065.1|AE014199_1 tyrosyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586067|gb|EAO62595.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77171736|gb|EAO74934.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 419

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 148/418 (35%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFDELKERGLVFQTTDEDALRKALEEGSVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDVERSLQTKKTVVSWGNKIRGQLSNFLEFETGDNKAVLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIV 357
           E+ T+VHG +  ++A     + F  +I    +  +            +    + ++ L+V
Sbjct: 300 EVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + +
Sbjct: 360 TSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLN 417


>gi|226306757|ref|YP_002766717.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226185874|dbj|BAH33978.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 425

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 143/424 (33%), Positives = 224/424 (52%), Gaps = 13/424 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   
Sbjct: 1   MTENILDELTWRGLIAQSTDLDALRKDLEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G++PI L GG T +IGDP      R M  +  + +   +I+G    F+ +    T A
Sbjct: 61  QRAGNRPIVLAGGATGLIGDPRDVG-ERTMNSADTVADWAGRIRGQLERFVDFDDSPTSA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 120 VIENNMNWTGKMSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           ++ L ++  C LQ+GGSDQWGNII G++L  R+    + A+T PL+T+A G K GK+   
Sbjct: 179 YLHLRRDLGCTLQVGGSDQWGNIIAGVELNRRVDGESVHAMTVPLVTSADGKKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +     +     EA+K
Sbjct: 239 GSLWLDPEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTADELAELETATAERPHAREAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGL 352
            +A E+TT+VHG         A+   F  +  ++         +   S+S+        +
Sbjct: 299 RLAAEMTTLVHGEHNTRAVELASQALFGKAELAELDESTLAAALKEASVSELAPGEPRTI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G   S   ARR +K     +NN  +S +  +    D      + +  GK+N  
Sbjct: 359 IDLLVTSGLCESKGAARRAVKEGGASVNNQKVSADDWEPAASDLLHGSWLVVRRGKRNFA 418

Query: 413 ICHL 416
              +
Sbjct: 419 GVKI 422


>gi|332653332|ref|ZP_08419077.1| tyrosine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332518478|gb|EGJ48081.1| tyrosine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 407

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 170/407 (41%), Positives = 243/407 (59%), Gaps = 6/407 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G++
Sbjct: 5   EELKARGLIAQVTNEEEISKMINEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNR 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT  IGDPS R + R MM  + IQ N +  K     FI++G G   A M+NN 
Sbjct: 65  PIALIGGGTGYIGDPSGRTDMRSMMTPETIQHNCDCFKKQMERFIEFGEG--KAQMVNNA 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + YIDLLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  L +
Sbjct: 123 DWLLGLNYIDLLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYLFQ 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT  GA+WL+ 
Sbjct: 181 HYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTAKGAVWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
             TSPY F+QYWRN+ D DV+   + LT LP+ +ID M K +G ++N AK+I+A E+T +
Sbjct: 241 NKTSPYEFYQYWRNVGDQDVLKCLRMLTFLPLEQIDEMDKWEGSQLNTAKEILAFELTKL 300

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEA 368
           VHG EEA+KA  AA   F       ++PT +++ + ++ G +G+L ++V    A S  EA
Sbjct: 301 VHGEEEAKKAQDAAKALFVGGGDMSNVPTTTLTAENLTDGSIGILDMMVTCKLAPSKKEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR ++   + +N+  +S+   +    D    G I +  GKK +    
Sbjct: 361 RRLVEQGGVTVNDEKVSDVNTRYTADDLSGDG-IMVRKGKKVYHRVQ 406


>gi|296445288|ref|ZP_06887247.1| tyrosyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257243|gb|EFH04311.1| tyrosyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 450

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 211/410 (51%), Positives = 289/410 (70%), Gaps = 1/410 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+FL+ L  RGF+HQ S+   LD     G + AY+G+D TA+SLH G+L  +M+L WLQ
Sbjct: 37  NSEFLATLIARGFVHQCSDFSGLDEKACSGDLVAYVGFDCTAASLHVGNLLSIMMLAWLQ 96

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KP+ L+GGGT+ +GDPS +DESR+++  + I  N   I+  F  F+ +G  KTDA+
Sbjct: 97  KTGGKPLPLVGGGTTRVGDPSGKDESRKLLTIETIDANKAAIQKTFEKFLAFGARKTDAV 156

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  WL  + YID LR++G  FSVNRMLS +SV+ RL REQ LSF+EFNYM LQ+YDF
Sbjct: 157 LLDNAEWLTKLNYIDFLRDVGRHFSVNRMLSMDSVKLRLDREQELSFIEFNYMCLQSYDF 216

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VE+AK Y   LQMGGSDQWGNI+ G+DLG RL T +L+ALT+PLLTT+SG KMGKT +GA
Sbjct: 217 VEIAKRYGASLQMGGSDQWGNIVMGVDLGRRLGTHQLYALTAPLLTTSSGAKMGKTAAGA 276

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M SPY++WQ+WRN++DADV+ F K  T LP+ EI+++A L G EINEAKK +AT
Sbjct: 277 VWLDASMLSPYDYWQFWRNVEDADVLRFLKLFTFLPLDEIEKLAALGGAEINEAKKALAT 336

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T ++HGRE AE AA  A   F+    +  +P +++   E S G+G+L+  VKAG   S
Sbjct: 337 EATALLHGREAAEAAAETARRTFEEGALALSLPRVAVPAAEWSAGLGVLSAFVKAGLVAS 396

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           T EARR +KS  +++N+  +++EK  +   +      +KLS GKK H++ 
Sbjct: 397 TGEARRQIKSGGLRLNDEPVTDEKATLGDANLVDG-VVKLSLGKKRHVLL 445


>gi|195977257|ref|YP_002122501.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|254783639|sp|B4U045|SYY_STREM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|195973962|gb|ACG61488.1| tyrosyl-tRNA synthetase TyrS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 418

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 139/418 (33%), Positives = 219/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G  F+VN M+S +SV+ R+  E  +S+ EF Y ++Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKHFTVNYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIW
Sbjct: 180 LNAKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +     +    A+K +A 
Sbjct: 240 LDAKKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG    ++A     + F  +I +     +      V          + ++ ++V
Sbjct: 300 EVVTLVHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  L++ AI +N   + +    +   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDLQNGAIYLNGERLQDLDYSLSTADRIDNQLTVIRRGKKKYAVLT 417


>gi|255083086|ref|XP_002504529.1| predicted protein [Micromonas sp. RCC299]
 gi|226519797|gb|ACO65787.1| predicted protein [Micromonas sp. RCC299]
          Length = 506

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 233/432 (53%), Gaps = 20/432 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K+D + +L ERG +   +N  EL   C++G ++ Y G+D TA SLH G+L  +++L W Q
Sbjct: 76  KADVVDVLKERGLLDACTNEDELRKACAEGSLSVYCGFDPTADSLHLGNLLGIVVLAWFQ 135

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-----KYGTG 119
           + GH P++L+GG T  +GDPS +   R ++    I  N   IK I    +        T 
Sbjct: 136 RCGHTPVALLGGATGRVGDPSGKSAERPVLDDDTINANTAGIKAILERVLANGAADADTD 195

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
              A+++NN  W  S+ +++ LRE+G +  V  M++ +SV++RL  EQ +SF EF+Y +L
Sbjct: 196 VPPAVVMNNLDWFGSMGFLEFLREVGKYARVGTMMAKDSVKTRLDSEQGMSFTEFSYQLL 255

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMG 238
           Q YDF  L K +D R+Q+GGSDQWGNI  G DL  RL   +  + +T PLL  A G K G
Sbjct: 256 QGYDFCHLFKEHDVRVQVGGSDQWGNITAGTDLIRRLADKEGAWGVTFPLLLKADGRKFG 315

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEI 295
           K+  GA+WL+ E  SPY F+QY     DADVV F + LT +P   +  I+      G   
Sbjct: 316 KSEDGAVWLSPERLSPYKFYQYMLQSTDADVVRFMRMLTFVPLAEIEAIEASMSADGYVP 375

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
           N A+K +A E+T  VHG+E   +A  A       +               +PT  +++DE
Sbjct: 376 NTAQKRLAEEVTRFVHGKEGLTQALKATEGLKPGADTVLDAATLEALAGDIPTAELARDE 435

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V  G  ++ ++   G   S  EA+R +K    ++NN  + +E+  I   D      + L+
Sbjct: 436 V-VGKTVVDVMAATGLQKSKGEAKRMIKGGGARLNNVKVEDEEATIGEDDVIEGRVLLLA 494

Query: 406 FGKKNHIICHLC 417
            GKKN ++  + 
Sbjct: 495 AGKKNKLLVRVV 506


>gi|148992057|ref|ZP_01821831.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489160|ref|ZP_02713359.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147929106|gb|EDK80117.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572178|gb|EDT92706.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071534|gb|EGI82027.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 418

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADTVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 361 SGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|306832581|ref|ZP_07465720.1| tyrosine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425189|gb|EFM28316.1| tyrosine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 418

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 142/418 (33%), Positives = 216/418 (51%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVTKIQNQLSRFLDFENGDNKAVMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFGNVSFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIAT 304
           L+ E TSPY  +Q+W N+ D D V F K  T L               +    A+KI+A 
Sbjct: 240 LDAEKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIAEIEEEFNAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG    ++A     + F  +I S     +    + V            ++ ++V
Sbjct: 300 EVVTLVHGEAAYKQALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQADNNRNIVEILV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A  + S  +AR  +++ AI IN   I +    +   D        +  GKK + +  
Sbjct: 360 AAKISPSKRQAREDVQNGAIYINGERIQDLDYTLSDDDKIDNELTVIRRGKKKYFVLT 417


>gi|229543517|ref|ZP_04432577.1| tyrosyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229327937|gb|EEN93612.1| tyrosyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 419

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 152/423 (35%), Positives = 232/423 (54%), Gaps = 20/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L     VT Y G D T  S+H GHL   + L   Q+ 
Sbjct: 2   DLLEDLKWRGIIYQQTDEEGLAELLQNRKVTLYCGIDPTGDSMHIGHLLPYLTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI ++GG T +IGDPS + E R+++  +++++N E +K     F  +  G++ A+M+
Sbjct: 62  GHRPIVVLGGATGMIGDPSGKKEERKLLTVEKVKQNGEALKKQLERFFDFD-GESGAIMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  +  LR+ G    +N ML+ +++ SRL  E  +SF EF Y ILQA D+  
Sbjct: 121 NNYDWHGSMDLVTFLRDYGKHIGINYMLAKDTIASRL--ETGISFTEFTYTILQAVDYFN 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K Y+CRLQ+GGSDQWGNI  G++L  +   +  K F LT PL+T A GTK GKT SGA
Sbjct: 179 LYKQYNCRLQIGGSDQWGNITSGLELIRKLEPEGEKAFGLTIPLVTKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N  D DVV + K  T LP  EI+ + K       + +A+K +
Sbjct: 239 VWLDAEKTSPYEFYQFWVNTADLDVVKYLKYFTFLPKEEIEELEKSVETEPHLRKAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+T ++HG E  ++A       F  ++            + +P+  +  +E  +   L
Sbjct: 299 AAEMTKLIHGEEALQQALNITEALFSGNVKKLSAEEMKQGFKDVPSFQLESEEQKQ---L 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V A  + S  +AR  +++ AI +N   I++    +  QD        +  GKK + 
Sbjct: 356 VELLVAAKISPSKRQAREDIQNGAIYVNGDRITDLGYALGEQDKIGGEFTVIRRGKKKYF 415

Query: 413 ICH 415
           +  
Sbjct: 416 LIK 418


>gi|330684055|gb|EGG95811.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 420

 Score =  367 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 140/425 (32%), Positives = 225/425 (52%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MTNALIEDLKWRGLIYQQTDEAGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +   ++++ N++ I        ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEANVQGISNQMHKLFEFGTD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N  D DV+ F K  T L   EI+++ +   +     EA+K
Sbjct: 238 GAVWLDADKTSPYEFYQFWINQSDEDVIKFLKYFTFLSKEEINQLEQSKEEAPHKREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG +    A   +   F                + +P + +SK       
Sbjct: 298 ALAENVTRFIHGEDALNDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSK----NTT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +++ G  +S  +AR  + + AI IN     +   ++  +D        +  GKK 
Sbjct: 354 NIIDALIETGIGSSKRQAREDVNNGAIYINGERQQDVNYELTDEDKIEGAFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|289450632|ref|YP_003475585.1| tyrosine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185179|gb|ADC91604.1| tyrosine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 424

 Score =  367 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 178/412 (43%), Positives = 256/412 (62%), Gaps = 6/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +++   ILSERG+I Q ++P E+  L S+  VT YIG+D TA SLHAGH  Q+M++  +Q
Sbjct: 18  ETNIYDILSERGYIAQCTHPEEVRKLLSKPGVTFYIGFDPTADSLHAGHFIQVMIMAHMQ 77

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+LMGGGT +IGDPS R + R+MM  + +Q N++ IK   S  I++G G   A 
Sbjct: 78  KAGHRPIALMGGGTGMIGDPSGRSDLRKMMTRETVQHNVDCIKAQMSRLIEFGPG--KAT 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ YID LRE G  FSVNRML+ E  + RL  E  L+FLEFNYM++QAYDF
Sbjct: 136 IANNADWLLNLNYIDFLREFGPCFSVNRMLTAECYKKRL--EVGLTFLEFNYMLMQAYDF 193

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L ++ +CRL++GG DQW NI+ G DL  R    + + LT  LLTT+ G KMGKT +GA
Sbjct: 194 YKLHESMNCRLELGGDDQWSNILAGTDLIRRKTGEETYGLTFRLLTTSEGIKMGKTANGA 253

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +   P+ F+Q+WRNI DADV++  K +T + M EI    KL+G EIN AKK +A 
Sbjct: 254 LWLDPDKCPPFEFYQFWRNIADADVINCLKMVTFVSMDEIRAYEKLEGSEINTAKKRLAF 313

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A +    A+E F+    SQ M T  +   ++ +   +L  ++      S
Sbjct: 314 EVTKLIHGEEIAAQCQQQAIELFEGGGRSQSMETAELGSSDLGK-TTILDSLLAVKLIPS 372

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E RR ++ N + +N  +I++        DF + G   +  GKK +    L
Sbjct: 373 KGEGRRLMQQNGLFLNEKVIADFSRTWCADDF-ANGEAIIRKGKKKYYRFIL 423


>gi|295109895|emb|CBL23848.1| tyrosyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 409

 Score =  367 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 171/402 (42%), Positives = 250/402 (62%), Gaps = 7/402 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VWEELKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT +IGDPS R + R+MM  + IQ NI+  K   S FI +  G   ALM+N
Sbjct: 63  NRPIALLGGGTGMIGDPSGRTDMRQMMTKETIQHNIDCFKKQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+DLLR++G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLNLNYVDLLRDVGAHFSVNRMLTAECYKQRM--ERGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+DDADV+   + LT LP+ +ID MA  +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVDDADVIKCMRLLTFLPLEQIDEMATWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATST 365
            +VHG EEA+KA   A   F     + HMP+  ++ ++      + L+T+++KAG   + 
Sbjct: 299 NLVHGEEEAKKAQEGARALFSGGADTAHMPSTELADEDFTEDDTIDLITMLIKAGLVPTR 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +E RR ++   + I+   I++ K  +        G + L  G
Sbjct: 359 SEGRRAIEQGGVSIDGEKITDIKHTVAKDSLAGDG-VVLKRG 399


>gi|291561959|emb|CBL40767.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 407

 Score =  367 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 174/410 (42%), Positives = 251/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VYEELQARGLIAQVTNEEEIRKMVNEGRAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT ++GDPS R + R MM  + IQ N +  K   S FI +  G   A+M+N
Sbjct: 63  NKPIALIGGGTGMVGDPSGRTDMRTMMTVETIQHNCDCFKKQMSRFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YID LREIG  FSVN ML  E  + R+  E+ LSFLEFNYM++Q+YDF EL
Sbjct: 121 NAEWLMNLNYIDFLREIGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMLMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTTPFEFYQYWRNVGDADVLKCLRMLTFLPLEQIDEMDKWEGSQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
           ++VHG EEA+KA  +A   F     ++ MPT  +S  ++S G + LL+++ K+G   S +
Sbjct: 299 SLVHGEEEAKKAQESARALFAGGAAAE-MPTAELSDADLSDGSIDLLSIVQKSGLCASRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   + ++  I+ + K     +     G I +  GKKN     +
Sbjct: 358 EARRNVEQGGVSVDGEIVKDIKAVYTKEQLSGEG-IVVKRGKKNFRRVVV 406


>gi|219666306|ref|YP_002456741.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|259516975|sp|B8G0N6|SYY_DESHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219536566|gb|ACL18305.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 420

 Score =  367 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 232/422 (54%), Gaps = 14/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L        +T Y G+D TA SLH GHL  +++L   Q  
Sbjct: 2   NILDDLKARGLVYQTTDEEALYKRLES-PMTLYCGFDPTADSLHIGHLLPVLMLRRFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS +   R +  ++ +QE   +IK   S F+ +      A+M 
Sbjct: 61  GHCPIALVGGGTGLIGDPSGKTSERTLNPTEVVQEWANRIKEQLSCFLDFEGVGNPAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  I+ LR+IG  FS+  ML+ ESV SR+   + +SF EF+Y ILQ+YDF++
Sbjct: 121 NNYEWLGTINVIEFLRDIGKNFSLGSMLAKESVESRM--SRGISFTEFSYQILQSYDFLK 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L + Y C +Q+GGSDQWGNI  G DL  R+   +  ++  LT PL+T + GTK GKT  G
Sbjct: 179 LNELYGCEMQIGGSDQWGNITSGTDLIRRMSVGEDRQVHGLTVPLVTKSDGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ + TSPY F+Q+W N DD DVV +    T L + EI           E   A+++
Sbjct: 239 AVWLDPDKTSPYKFYQFWINTDDRDVVKYLNFFTFLSIEEIQGLAQEVESQPEKRNAQRM 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTL 355
           +A E+T +VHG E  E+A   +   F   I +     +      +   +V    M L+  
Sbjct: 299 LAKEVTELVHGVEARERAEKISQALFTGGIANLTAKEVEEGFSDVPSADVEDQEMLLVDA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++K G  +S  +AR  ++S A+ +N    ++  L +   D   +  I +  GKKN+ +  
Sbjct: 359 LIKVGAVSSRRQARESMESGAVYVNGIRQTDTTLTVAQLDKIESRFIVIRRGKKNYYLVK 418

Query: 416 LC 417
           L 
Sbjct: 419 LV 420


>gi|172040781|ref|YP_001800495.1| hypothetical protein cur_1101 [Corynebacterium urealyticum DSM
           7109]
 gi|171852085|emb|CAQ05061.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 436

 Score =  367 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 152/436 (34%), Positives = 230/436 (52%), Gaps = 25/436 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
               S+ +  L  RG I   ++  EL     +     Y G+D T  SLHAGHL  L+LL 
Sbjct: 5   TIQNSNLVDELQWRGLIADSTDLDELREQL-KNPTAVYCGFDPTGDSLHAGHLVPLLLLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----- 116
             Q  GHK  +L GG T +IGDP      R M+  +++ EN+E IK    +F+ +     
Sbjct: 64  RFQLAGHKAFALAGGATGMIGDPRDVG-ERSMLTEEQVAENVEHIKKQLRAFLLFEGSAE 122

Query: 117 ----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
               G     A ++NN  W+ ++  I  LR++G  FS+N MLS ++V+ RL  +  +S+ 
Sbjct: 123 LEESGKDLHPATLVNNADWIGNMSVIHFLRDLGKNFSLNTMLSRDTVKRRLAAD-GISYT 181

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF+YM+LQA DFV L + +D  +Q+GGSDQWGNI+ G+DL  R+    +  LT PL+T +
Sbjct: 182 EFSYMLLQANDFVHLHREHDVCVQVGGSDQWGNIVSGVDLVRRMDGDSVHGLTVPLVTDS 241

Query: 233 SGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAK 289
            G K GK+   G +WL+ E+TSPY+++QY+ N  DADVV F +  T L   EIDR  +  
Sbjct: 242 EGKKFGKSTGGGNLWLDPELTSPYSWYQYFFNTADADVVKFLRMFTFLDREEIDRLAVEV 301

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISI 341
            +     EA++++A E+T +VHG +   K   AA            D    +  +   ++
Sbjct: 302 AERPFKREAQRVLAQEMTALVHGEDAVGKVELAAQALFGRADLSHLDEQTLAAALQETTV 361

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++  V  G  L+ L+V AG   S   ARR +K     +NN  I + +  + ++D    G 
Sbjct: 362 AEGAV--GASLVELLVAAGLEKSNGAARRTIKEGGAYVNNERIDDAEWTVSVEDLLVGGW 419

Query: 402 IKLSFGKKNHIICHLC 417
           + L  GKKN     + 
Sbjct: 420 LVLRKGKKNFAGAKIS 435


>gi|228471982|ref|ZP_04056750.1| tyrosine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276594|gb|EEK15307.1| tyrosine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 431

 Score =  367 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 154/433 (35%), Positives = 229/433 (52%), Gaps = 24/433 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L   Q
Sbjct: 1   MRNFVEELRWRGMIQDIMPETE--QHLLEGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
             GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +  T    A
Sbjct: 59  NCGHKPYALVGGATGMIGDPSGKSTERNLLTEEALAHNIAGIKKQLAKFLDFESTASNRA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
            ++NN  W+    ++  +R+IG   +VN M++ +SV+ R       + +SF EF+Y +LQ
Sbjct: 119 ELVNNYDWMKGFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTEGMSFTEFSYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            +DF+ L +     LQMGGSDQWGNI  G +L  R  + K +ALT PL+T A GTK GK+
Sbjct: 179 GFDFLHLYQEKGVTLQMGGSDQWGNITTGTELIRRKASGKAYALTCPLITKADGTKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEA 298
             G +WL+ E TSPY F+QYW N  DAD   + K  T LP  EI+ +     +   +   
Sbjct: 239 EGGNVWLDPEKTSPYKFYQYWINTSDADAQRYIKIFTMLPKEEIETLTAEHLQAPHLRIL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +  +A E+T +VHG+EE EKA  A+   F  S                   +P   I+ D
Sbjct: 299 QNKLAEELTLLVHGKEEWEKAVQASGILFGNSTSEDLKKLDAKTFLEVFDGVPQAEIALD 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++  +  K GF  S +EARR L  N+I +N   ++ E   +  +D  +   I 
Sbjct: 359 DLKNGLDMIAALSAKTGFIKSNSEARRALGENSISVNKEKVT-EGYCLSEKDLLNQRFIL 417

Query: 404 LSFGKKNHIICHL 416
           L  GKKN+ +  +
Sbjct: 418 LQRGKKNYFLIIV 430


>gi|291558304|emb|CBL35421.1| tyrosyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 404

 Score =  367 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 174/408 (42%), Positives = 253/408 (62%), Gaps = 10/408 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYEELIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  G   AL++N
Sbjct: 63  NKPIALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDG--KALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+D+LRE+G+ FSVN+MLS E  + R+  E+ LSFLEFNYMI+Q+YDF +L
Sbjct: 121 NADWLLNLNYVDVLREVGACFSVNKMLSAECYKQRM--ERGLSFLEFNYMIMQSYDFYKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+Y C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YKDYGCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  
Sbjct: 299 KLVHGEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKR 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EAR ++    I +N+  +++    I++ +F       +  GKK++   
Sbjct: 359 EARTNVTGGGISVNDEKVTDPAAMIEIGEF-----AVIKKGKKSYCKI 401


>gi|239625518|ref|ZP_04668549.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519748|gb|EEQ59614.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 408

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 171/410 (41%), Positives = 245/410 (59%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT ++GDPS R + R MM  + IQ N +  K   S FI +  G   A+M+N
Sbjct: 63  NKPIALIGGGTGMVGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NAEWLMGLNYIDFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FLRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTTPFEFYQYWRNVADADVLKCLRMLTFLPIEQIDEMDQWEGSQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA   A   F     + +MPT  +S+++   G + +L ++ K+G   S +
Sbjct: 299 KLVHGEEEAAKAQEGARALFAAGGSTANMPTFELSEEDFVDGSIDILGVLQKSGLCASRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   + ++ S + + K       F   G +    GKKN +   +
Sbjct: 359 EARRNVEQGGVSVDGSQVKDIKAAFAKDQFAGDG-MVFKRGKKNFMKVVV 407


>gi|260887324|ref|ZP_05898587.1| tyrosine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260862960|gb|EEX77460.1| tyrosine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 414

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 178/408 (43%), Positives = 256/408 (62%), Gaps = 7/408 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERGFI Q ++   +  L  +  VT Y G+D TA SLH GH   LM +  +Q+ 
Sbjct: 11  NVFDVLKERGFIAQCTDEEGVRELLGKESVTFYTGFDPTADSLHVGHFLGLMAMSHMQRA 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GGGT  +GDPS R + RRM+  ++I+ N +  K   + FI +  G   ALM+
Sbjct: 71  GHRPVCLVGGGTGTVGDPSGRTDMRRMLTDEDIEHNCDCFKKQIARFIDFSEG--KALMV 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI+LLRE+G+ F+VNRMLS E+ ++R   E+ L+FLEFNYM++QAYDF+E
Sbjct: 129 NNGDWLRKLNYIELLREVGAHFTVNRMLSAEAYKTRW--EKGLTFLEFNYMVMQAYDFLE 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L+    C+LQMGG DQW NII G++L  R +    + LT  LLT + G KMGKT  GA+W
Sbjct: 187 LSHRCGCKLQMGGDDQWSNIIAGVELIRRKEAKPAYGLTFTLLTKSDGQKMGKTAGGALW 246

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRNIDDADV      LT LPM E+ R+  L+   INEAK ++A E+
Sbjct: 247 LDAEKTSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALRDAAINEAKTVLAYEV 306

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG  EA+KA   A   F     S  +PT +++ +E+  G  LL ++ K G  +S +
Sbjct: 307 TKLVHGEAEAKKAKEGAEAMFGRGAASAELPTFTLTAEEM--GAKLLDILAKNGVFSSKS 364

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E RR +    + +N++ +++   +++ +DF S G   +  GKK H   
Sbjct: 365 EGRRLISQGGVTLNDARVTDADYRLQEEDF-SDGTALVKKGKKKHYRL 411


>gi|225869573|ref|YP_002745520.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254783638|sp|C0M6G7|SYY_STRE4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225698977|emb|CAW92036.1| putative tyrosyl-tRNA synthetase [Streptococcus equi subsp. equi
           4047]
          Length = 418

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 138/418 (33%), Positives = 219/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G  F++N M+S +SV+ R+  E  +S+ EF Y ++Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKHFTINYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIW
Sbjct: 180 LNAKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +     +    A+K +A 
Sbjct: 240 LDAKKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG    ++A     + F  +I +     +      V          + ++ ++V
Sbjct: 300 EVVTLVHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  L++ AI +N   + +    +   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDLQNGAIYLNGERLQDLDYSLSTADRIDNQLTVIRRGKKKYAVLT 417


>gi|148998105|ref|ZP_01825618.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|225859855|ref|YP_002741365.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|307068712|ref|YP_003877678.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|254783642|sp|C1CAS7|SYY_STRP7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147756115|gb|EDK63158.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|225721708|gb|ACO17562.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|306410249|gb|ADM85676.1| Tyrosyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 418

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 150/420 (35%), Positives = 227/420 (54%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + +  
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|262184147|ref|ZP_06043568.1| tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 419

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 146/421 (34%), Positives = 223/421 (52%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   QK 
Sbjct: 2   NIIDELQWRGLINQSTDLDALREAC-EEPITLYCGFDPTGDSLHAGHLVPMIMLRRFQKA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP      R M+  + I +N+  IK     FI +  G+  A M+
Sbjct: 61  GHHPIALAGGATGQIGDPRDVG-ERTMLSQETINDNMVAIKKQLRQFIDFA-GENAATMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V 
Sbjct: 119 NNADWTSKMTVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L   +DC LQ+GG DQWGNI+ G+DL  R+K  K+  LT PL+T A G K GK+  G  +
Sbjct: 178 LHDEFDCILQIGGGDQWGNIVSGVDLNRRVKGAKVHGLTVPLVTDAQGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E TSPY+++QY+ N  D+ V+ + +  T L   EI    +   +     EA++ +A
Sbjct: 238 WLDPEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQEEIAEYEQKVAEEPFRREAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    A    F  +  +          +   +++         ++ L
Sbjct: 298 QEMTNLVHGEEATKSVKLATQALFGKAELADLDEQTLVGALSETTVADIAAGEPRTIVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G A S   ARR +K     +NN  I +++ +   +D      + L  GKKN     
Sbjct: 358 LVACGLADSKGAARRTIKEGGAYVNNQRIESDEWEPAAEDLLHGAWLVLRRGKKNFAGAK 417

Query: 416 L 416
           L
Sbjct: 418 L 418


>gi|302561395|ref|ZP_07313737.1| tyrosyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302479013|gb|EFL42106.1| tyrosyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 422

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 137/421 (32%), Positives = 216/421 (51%), Gaps = 11/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L  + + G VT Y G+D TA SLH GHL Q++ L  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKVLADGPVTFYCGFDPTAPSLHVGHLVQVLTLRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A 
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNAPETVAGWVERLRGQIEPFLTFE-GENAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQNLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + + C LQ GGSDQWGN+  G+DL  R      + A  +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRHGCVLQQGGSDQWGNLTAGLDLIHRLEPDASVHAYATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-GKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+  + + L+    +E++ + K    +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISGYMRILSFRSRAELEELEKQTAERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSRGMGLLTL 355
             E  T +        A  AA +          +           +    V+    ++ L
Sbjct: 299 LAEELTTLVHGAGQTAAVIAASKALFGQGELGELDDRTLAAALSEVPHVRVTELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVPSKSAARRTVKEGGAYVNNVKVTAEDAVPATEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 L 416
           +
Sbjct: 419 V 419


>gi|227501840|ref|ZP_03931889.1| tyrosyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077865|gb|EEI15828.1| tyrosyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 428

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 152/430 (35%), Positives = 231/430 (53%), Gaps = 18/430 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++ +  L  RG I+Q ++   L    ++  ++ Y G+D T SSLHAGHL  L++L
Sbjct: 1   MSN-TTNIIDELQWRGLINQSTDLEALKEA-AESPISLYCGFDPTGSSLHAGHLVPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---G 117
              Q+ GH+PI+L GG T +IGDP      R M+  ++I EN++ IK    +F+ +   G
Sbjct: 59  KRFQRFGHRPIALAGGATGMIGDPRDVG-ERSMLSEEQIAENMQAIKDQLEAFVDFTEAG 117

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                A+M+NN  W   I  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM
Sbjct: 118 ESAIPAVMVNNADWTSQINVIEYLRDIGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA DFV L K YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K 
Sbjct: 177 LLQANDFVHLHKEYDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKF 236

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKE 294
           GK+  G  +WL+ ++TSPY+++QY+ N  DA V+ + +  T L   EI        +   
Sbjct: 237 GKSTGGGKLWLDPQLTSPYSWYQYFINAGDAVVIDYLRWFTFLTQEEIAELARKVEEEPH 296

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-------DEVS 347
             EA++++A E+TT+VHG +   +A   A +        Q +   ++S         EV 
Sbjct: 297 KREAQRVLAREMTTLVHGEQAT-EAVELASQALFGKAELQDLDEATLSSALQETEIAEVG 355

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               +L L+V+AG   S   ARR +      +NN  I + +      D      + L  G
Sbjct: 356 PEATILDLLVEAGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPNSNDLLHGSWLVLRKG 415

Query: 408 KKNHIICHLC 417
           KK      + 
Sbjct: 416 KKRFAGARVV 425


>gi|295132372|ref|YP_003583048.1| tyrosyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980387|gb|ADF50852.1| tyrosyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 431

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 231/434 (53%), Gaps = 23/434 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L+ RG IH +    E     ++ +  AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MNKNFVEELTWRGMIHDVMPGTE--EHLNEQMRAAYVGIDPTADSLHIGHLVGVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTD 122
           Q  GHKP +L+GG T +IGDPS +   R ++    ++ N   IK   S F+ + G  +  
Sbjct: 59  QLAGHKPYALVGGATGMIGDPSGKSAERNLLDEATLRHNQNSIKEQLSRFLDFEGAEENT 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A+++NN  W+    ++D +R++G   +VN M++ +SV+ RL  +  + +SF EF Y ++Q
Sbjct: 119 AVLVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKKRLSSDASEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L + + C LQMGGSDQWGNI  G ++  R+   K +ALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLFREHQCTLQMGGSDQWGNITTGTEMIRRIGDGKGYALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G IWL+   TSPY F+QYW N  DAD   + K  T L   EI+       +   + E 
Sbjct: 239 EGGNIWLDANRTSPYKFYQYWLNTSDADAEKYIKIFTFLSKEEIEDLTSKHQEAPHLREL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +K++A E+T MVH  E+   A  A+   F  S                 + +P   +S+ 
Sbjct: 299 QKVLAKEVTVMVHSEEDYNNAVKASEVLFGKSTAEDLKSLNEATFLDVFEGVPQAEVSRA 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           EV  G+ ++  +  K  F  S  EARR LK N++ +N   +  E   I L D  +   + 
Sbjct: 359 EVEAGLDMIGALAAKTDFLKSNGEARRALKENSVSVNKEKVQ-EDYTISLDDLINDKYVI 417

Query: 404 LSFGKKNHIICHLC 417
           ++ GKKN  I  + 
Sbjct: 418 INKGKKNTYILVVV 431


>gi|15901915|ref|NP_346519.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|15903951|ref|NP_359501.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|111657584|ref|ZP_01408321.1| hypothetical protein SpneT_02001219 [Streptococcus pneumoniae
           TIGR4]
 gi|116516055|ref|YP_817314.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|149002930|ref|ZP_01827841.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|168484388|ref|ZP_02709340.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|221232808|ref|YP_002511962.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855587|ref|YP_002737099.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225857673|ref|YP_002739184.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|237650579|ref|ZP_04524831.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821719|ref|ZP_04597564.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|81449400|sp|Q8DN52|SYY_STRR6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81531469|sp|Q97NE3|SYY_STRPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122277840|sp|Q04I74|SYY_STRP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783644|sp|B8ZPM2|SYY_STRPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783647|sp|C1CH28|SYY_STRZJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783648|sp|C1CN46|SYY_STRZP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14973611|gb|AAK76159.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|15459605|gb|AAL00712.1| Tyrosyl-tRNA synthetase 1 [Streptococcus pneumoniae R6]
 gi|116076631|gb|ABJ54351.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147758933|gb|EDK65928.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|172042350|gb|EDT50396.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|220675270|emb|CAR69863.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae ATCC
           700669]
 gi|225723386|gb|ACO19239.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225724666|gb|ACO20518.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|332071369|gb|EGI81863.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332198708|gb|EGJ12790.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 418

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 223/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I      +   D        +  GKK + +  
Sbjct: 361 SGIVNSKRQAREDVQNGAIYVNGDRIQELDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|298694997|gb|ADI98219.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 420

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 228/428 (53%), Gaps = 23/428 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L
Sbjct: 1   MTNV---LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT  
Sbjct: 58  RRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDH 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQ
Sbjct: 118 -GAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGK 239
           A DF  L +  +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK
Sbjct: 175 AIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + SGA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + E
Sbjct: 235 SESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLRE 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS 347
           A+K +A E+T  +HG +    A   +   F                + +P +++S    +
Sbjct: 295 AQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLS----N 350

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ ++++ G + S  +AR  + + AI IN     +    +  +D        +  G
Sbjct: 351 NTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVSYALAPEDKIDGEFTIIRRG 410

Query: 408 KKNHIICH 415
           KK + + +
Sbjct: 411 KKKYFMVN 418


>gi|224476819|ref|YP_002634425.1| tyrosyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783637|sp|B9DN75|SYY_STACT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222421426|emb|CAL28240.1| tyrosyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 420

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 226/421 (53%), Gaps = 12/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ L  L  RG I+Q ++   L+ + ++  VT Y G D TA S+H GHL  L+ L   
Sbjct: 1   MTNELLKDLEWRGLIYQQTDAEGLENILNKEQVTLYCGVDPTADSMHIGHLLPLLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKPI L+GGGT +IGDPS + + R +   +++++N+  I         +  GK  A
Sbjct: 61  QNHGHKPIVLIGGGTGMIGDPSGKTDERVLQTEEQVEQNVRGIGNQMDKIFDFS-GKEAA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  I  ID LR+ G    VN ML  +SV+SRL  E  +S+ EF YMILQA D
Sbjct: 120 QLVNNRDWLGKISLIDFLRDYGKHVGVNYMLGKDSVQSRL--ENGISYTEFTYMILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L + Y+C++Q+GGSDQWGNI  GI+L  R+    + + +T PL+T A G K GK+ +
Sbjct: 178 FGHLNREYNCKVQIGGSDQWGNITSGIELMRRMYGQTEAYGITIPLVTKADGKKFGKSEA 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G +WL+ E TSPY  +Q+W N  DADV+ F K  T L   EI+R+ +   +   + EA+K
Sbjct: 238 GTVWLDAEKTSPYELYQFWINTTDADVIKFLKYFTFLDKEEIERLEQSKEEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLT 354
            +A  +   +HG      A   +   F   + +     +      + + EVS     ++ 
Sbjct: 298 ALAENVVRFIHGEGALNDAIRISEALFSGDLKALSSDELREGFKDVPQAEVSNATTNIVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            IV+AG ++S  +AR  + + AI IN     + K +I   D        +  GKK + + 
Sbjct: 358 FIVEAGISSSKRQAREDVSNGAIYINGEREQDLKYEISEADKIDNEFTIVRRGKKKYFMV 417

Query: 415 H 415
            
Sbjct: 418 K 418


>gi|325281475|ref|YP_004254017.1| Tyrosyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313284|gb|ADY33837.1| Tyrosyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 430

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 163/430 (37%), Positives = 231/430 (53%), Gaps = 22/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E   L ++G  TAY+G D TA SLH GHL  +M++   Q  
Sbjct: 2   NFVDELKWRGMIHDIMPGTE--ELLAKGQTTAYVGIDPTADSLHVGHLVSVMMMKHFQMA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKPI ++GG T +IGDPS + + R ++  + I++N+  IK   S FI +  T    A+M
Sbjct: 60  GHKPIFIIGGATGMIGDPSGKSQERNLLDEETIRKNMAGIKAQLSRFIDFNSTASNAAIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           LNN  W+    ++D +REIG   +VN M++ +SV+ RL  E  Q +SF EF Y ++Q YD
Sbjct: 120 LNNYDWMKQFSFLDFIREIGKHITVNYMMAKDSVKKRLSSESAQGMSFTEFTYQLVQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L KNY C LQMGGSDQWGNI  G +L  R +    + LT PL+T + G K GKT SG
Sbjct: 180 FLHLRKNYGCMLQMGGSDQWGNITTGGELIRRKEGLDAYGLTWPLMTKSDGKKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+ E TSPY F+Q+W N  D D   + K  T LP + ID       +   + + +K 
Sbjct: 240 NIWLDPERTSPYKFYQFWLNTTDEDAARYVKIFTILPPARIDALIAEHREAPHLRKLQKT 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A EIT ++HG E    A  A+   F  +                 + +P   I+  ++ 
Sbjct: 300 LAKEITCLIHGEEAYNLALEASQILFGNATSETLRKIDENTFLSVFEGVPQYEIAAADLK 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++  +  K    +S  EARR LKSNAI IN   +  E+  I          I    
Sbjct: 360 AGISIVDFLADKTAIMSSKGEARRALKSNAIGINKEKVQGEETIIGESHLIDGKYILAQS 419

Query: 407 GKKNHIICHL 416
           GKKN+ +  +
Sbjct: 420 GKKNYFLVIV 429


>gi|149184500|ref|ZP_01862818.1| tyrosyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831820|gb|EDL50253.1| tyrosyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 409

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 206/414 (49%), Positives = 282/414 (68%), Gaps = 7/414 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++S+ L +L ERG+IHQI++P  LD L ++ VV  YIG+D TA SLH G L Q+M+L
Sbjct: 1   MSTYQSELLRLLEERGYIHQITDPEGLDGLAARQVVPGYIGFDATAQSLHIGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI +MGGGT+ +GDPS +DESR+M+    I+ NI  I+ +F   + +G G 
Sbjct: 61  RRLQQAGHKPIVVMGGGTTKVGDPSGKDESRKMLNDAGIEANIAGIRTVFERLLTFGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  + YI+LLR++G  F+VNRML+F+SV+ RL REQ L+FLEFNYMILQ
Sbjct: 121 TDAVMVNNDEWLSQLGYIELLRDVGPHFTVNRMLTFDSVKLRLDREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA+ YDCRLQMGGSDQWGNI+ G++L  R+   +LF LT+PLLTTA G KMGKT
Sbjct: 181 AYDFRELAQRYDCRLQMGGSDQWGNIVNGMELARRMDGRELFGLTTPLLTTADGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E    Y+FWQYWRN+DD DV  F +  T LP+ EI R+  L+G E+N+AK 
Sbjct: 241 AAGAVWLNEEQLPAYDFWQYWRNVDDRDVGRFLRLFTDLPLDEIARLESLEGAEVNQAKT 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T +V G E A+ AA  A E F      + +PT+++     + GM +  ++   G
Sbjct: 301 ILANEVTALVRGSEAADLAARTAAETFAGGGAGEDLPTLAVG----AEGMRIGAVLTGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R L   A+K+    +++    +++ D       KLS GKK H I 
Sbjct: 357 FCASGKEAKRKLSEGAVKLGGEAVTDPGYLVEVAD---GAQAKLSLGKKKHAII 407


>gi|224370578|ref|YP_002604742.1| TyrS [Desulfobacterium autotrophicum HRM2]
 gi|223693295|gb|ACN16578.1| TyrS [Desulfobacterium autotrophicum HRM2]
          Length = 431

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 176/430 (40%), Positives = 255/430 (59%), Gaps = 23/430 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K   L IL++RGF+  +++  EL     +   T YIG+D T  SLH GHL  +M L  +Q
Sbjct: 3   KMSVLDILNQRGFVEAVTHEDELKEYLDKEGATCYIGFDPTGPSLHVGHLVTIMALAHMQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT +IGDPS + E R+++   ++ EN + I+   S F+ +  G   A+
Sbjct: 63  RNGHRPIALVGGGTGLIGDPSGKTEMRKVITHDQVNENKQSIQKQLSRFLDFEDG--KAM 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  WL  ++YI  LR+IG  FSVN+M+  ES R R++ ++ LSF+EFNYM+LQAYDF
Sbjct: 121 LLDNADWLTGLEYISFLRDIGRHFSVNKMIKAESYRVRIESDEGLSFIEFNYMLLQAYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + +DCRLQMGGSDQWGNI+ GIDL  R ++   F +T PL+TT+SG KMGKT  GA
Sbjct: 181 MQLCQAHDCRLQMGGSDQWGNIVAGIDLVRRTQSKTAFGITFPLITTSSGIKMGKTHKGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TS Y ++Q+W N DDADV  F    T LPM+EID++  ++G ++N AK I+A 
Sbjct: 241 VWLDPEKTSSYEYYQFWVNTDDADVAKFMALFTFLPMAEIDQVKGIEGAKMNAAKAILAH 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQH--------------------MPTISISKD 344
           E T + HG   A +A  AA   F      ++                    MP+ ++  +
Sbjct: 301 EATAIAHGLAAANEAFDAAATVFGAPSIPENLCPSSHIPRDGDGNLRAASSMPSSTVDIE 360

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            + RG+  + L V+ G + S  +ARR +      +NN  I      I   DF   G I L
Sbjct: 361 RLKRGIAAVDLFVETGLSKSKGDARRLISQGGGYLNNDRIEAFDTLILDSDF-KDGEILL 419

Query: 405 SFGKKNHIIC 414
             GKK +   
Sbjct: 420 RAGKKRYHKI 429


>gi|167751455|ref|ZP_02423582.1| hypothetical protein EUBSIR_02451 [Eubacterium siraeum DSM 15702]
 gi|167655701|gb|EDR99830.1| hypothetical protein EUBSIR_02451 [Eubacterium siraeum DSM 15702]
          Length = 404

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 175/408 (42%), Positives = 253/408 (62%), Gaps = 10/408 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYEELIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  G   AL++N
Sbjct: 63  NKPIALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDG--KALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D+LRE+G+ FSVN+MLS E  + R+  E+ LSFLEFNYMI+Q+YDF +L
Sbjct: 121 NADWLLSLNYVDVLREVGACFSVNKMLSAECYKQRM--ERGLSFLEFNYMIMQSYDFYKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+Y C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YKDYGCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  
Sbjct: 299 KLVHGEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKR 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EAR ++    I +N+  +++    I++ +F       +  GKK++   
Sbjct: 359 EARTNVTGGGISVNDEKVTDPAAMIEIGEF-----AVIKKGKKSYCKI 401


>gi|15604411|ref|NP_220928.1| tyrosyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226208|sp|Q9ZCZ4|SYY_RICPR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|3861105|emb|CAA15005.1| TYROSYL-TRNA SYNTHETASE (tyrS) [Rickettsia prowazekii]
 gi|292572175|gb|ADE30090.1| Tyrosyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 411

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 179/409 (43%), Positives = 271/409 (66%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+++Q ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFIYKGYLNQCTDLARLSAITQEAKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI ++GGGTS IGDP+ +D +R+ +  ++I+ N E IK   S FIK+G  + DA++L+
Sbjct: 63  HTPIVIIGGGTSKIGDPAGKDVTRKALTQEDIKRNAEGIKKSLSKFIKFGKDQGDAIILD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SV+ RL R   LSFLE NYM+LQ+YDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVKLRLDRSHHLSFLELNYMLLQSYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +KNY+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKNYNCILQLGGSDQWGNIVIGADLIRKISGKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L + E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVMRFAKLYSELDIVELNKFESLVSEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   A+ A   A++ F+     +++ T  ++ + +  G+    L   A  A S +E
Sbjct: 303 KLCHGERLAKLALETAVKIFEQGDIDENLHTFILAPEILQSGISAYNLFYNANLARSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I      +   IKLS GKK HI+  +
Sbjct: 363 ARKIIRGKGAKINDQLVEDENMTIDTNFLRNRKVIKLSVGKKRHILVKV 411


>gi|169829622|ref|YP_001699780.1| tyrosyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168994110|gb|ACA41650.1| Tyrosyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 435

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 141/428 (32%), Positives = 238/428 (55%), Gaps = 20/428 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ L  L  RG ++Q ++   +  L  +  V+ Y G D TA S+H GH+  L+ L   
Sbjct: 14  MTNELLQDLEWRGLLYQQTDADGMAKLLEEQSVSLYCGVDPTADSMHIGHIVPLLTLRRF 73

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+G       +      A
Sbjct: 74  QKAGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRGQLERIFDFAEDGNGA 133

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D
Sbjct: 134 QLVNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGID 191

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           +  L  +Y+CR+Q+GGSDQWGNI  G+++  +      K F +T PL+T A GTK GKT 
Sbjct: 192 YNHLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTA 251

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAK 299
            GA+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +   + +A+
Sbjct: 252 GGAVWLDGKKTSPYEFYQFWINAADADVIKYLKIFTFLTREEIESLAVSVEEEPHLRKAQ 311

Query: 300 KIIATEITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRG 349
           K +A E+T ++HG+   E+A             A+   +M    + +P+I ++K++    
Sbjct: 312 KSLAEEMTRLIHGQAALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKED---- 367

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V+AG ++S  +AR  + + AI +N   +++ +  +  +D        +  GKK
Sbjct: 368 KNIVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTDLEYVVDAKDRLEDAFSIVRRGKK 427

Query: 410 NHIICHLC 417
            + +    
Sbjct: 428 KYHMVKFV 435


>gi|317056427|ref|YP_004104894.1| tyrosyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315448696|gb|ADU22260.1| tyrosyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 406

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 178/411 (43%), Positives = 260/411 (63%), Gaps = 12/411 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
              L  RG I Q+++ +EL+ L + G  T YIG+D TA SLH GH   L L+  LQ  G+
Sbjct: 4   FEELKRRGLIAQMTDEKELEELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGN 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           KPI+L+GGGT +IGDPS + + R+M+  + IQ N E  K   S FI +  G   ALM+NN
Sbjct: 64  KPIALVGGGTGMIGDPSGKTDMRKMLTPETIQHNCECFKKQMSKFIDFSDG--KALMVNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ Y+D+LRE+G+ FSVN+ML+FE  + R+  E+ L+FLEFNYMI+Q+YDF  L 
Sbjct: 122 GDWLLNLNYVDVLREVGACFSVNKMLTFECYKQRM--ERGLTFLEFNYMIMQSYDFYRLF 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           ++Y C +Q GG DQW N++ G +L  +      +A+T  LL  + G KMGKT  GA+WL+
Sbjct: 180 QDYGCNMQFGGDDQWANMLGGTELIRKKLGKDAYAMTITLLLNSEGKKMGKTEKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEINEAKKIIATEIT 307
            E TSPY+F+QYWRN+DDADV+   K LT +P+ +I+ M   ++G E N+AK+++A E+T
Sbjct: 240 AEKTSPYDFYQYWRNVDDADVIKCLKLLTFVPIEQIEEMEQHMEGAEYNKAKELLAFELT 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
            ++HG EEA+KA  AA   F     S  MP ++++ D+V     +G+L L+VK+G A S 
Sbjct: 300 KLIHGEEEAQKADAAAKAIFGGGADSADMPAVTLTADDVDENKQIGILNLLVKSGLAPSN 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EARR ++ N I +N    ++ K  + L +      + +  GKK  +   L
Sbjct: 360 GEARRLVQQNGIAVNGEKFTDPKGMVDLSE-----QVIIKKGKKVFLKVVL 405


>gi|288957327|ref|YP_003447668.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288909635|dbj|BAI71124.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 420

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 204/416 (49%), Positives = 279/416 (67%), Gaps = 13/416 (3%)

Query: 7   DFLSILSERGFIHQISNPR----ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           DFL IL ERGF+HQ S+P      L      GV+TAY+G+D TASSLH GHL  +M L W
Sbjct: 14  DFLRILRERGFLHQCSDPADDLSGLAAAAPGGVLTAYVGFDATASSLHVGHLLSIMALRW 73

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+TG++PI L+GGGT+ IGDPSFRD +R M+   +I  N   ++G+F  ++ +G G  D
Sbjct: 74  LQRTGNRPIVLIGGGTTRIGDPSFRDTTRPMLDDAQIAANAAGLRGVFGQYMSFGDGPAD 133

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + Y+  LR+IG  F++NRMLSFESVR R++REQ L+FLEFNYMILQAY
Sbjct: 134 AMMVDNADWLDGLDYVPFLRDIGRHFTINRMLSFESVRQRMEREQPLTFLEFNYMILQAY 193

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL++ + C LQMGGSDQWGNI+ GI+L  R++  +LF LT+PLLTTASGTKMGKT  
Sbjct: 194 DFLELSRRHGCLLQMGGSDQWGNIVNGIELARRVERRELFGLTTPLLTTASGTKMGKTAG 253

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +   P++FWQ+WRN +DADV  F +  T LP+ EI R+ +L+G EINEAK I+
Sbjct: 254 GAVWLNADALRPFDFWQFWRNTEDADVGRFLRLFTELPLDEIARLERLEGAEINEAKIIL 313

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG  EAEKAA AA   F        +P I++ ++  + G+ L+  +V AG +
Sbjct: 314 ATEATRLCHGSAEAEKAAAAAGSPFAPGG--DGLPEITLRREAGADGVPLVDALVAAGLS 371

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            S   ARR ++    +++   +S+E   +            LS G+K H+   + G
Sbjct: 372 ASKGAARRLIREGGARLDGQPVSDEAATLTA-------PAVLSAGRKRHVRLIVAG 420


>gi|227486177|ref|ZP_03916493.1| tyrosine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235808|gb|EEI85823.1| tyrosine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 417

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 160/412 (38%), Positives = 245/412 (59%), Gaps = 6/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+  Q +N  EL    +   V  Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 11  NVFDELVDRGYYEQATNEEELKKKLATESVKFYCGFDATADSLTVGHLIQIMVMMRMQNY 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT++IGDPS R + R++M  + I  N E     F  F+ +   +  A ML
Sbjct: 71  GHRPVALLGGGTTLIGDPSGRSDMRQVMTVERINHNAECFYKQFQRFLDFS-DEGGAEML 129

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL  + ++  LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF++
Sbjct: 130 NNKDWLLDLNFVGFLRDVGSEFLVNEMIKKDAYKNRMAAG-GLTFFEFSYMLLQSYDFLK 188

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           + +     L+MGGSDQW NII G+DL ++ +    + +T  LLTTA G KMGK+  GA+W
Sbjct: 189 MYRENGVTLEMGGSDQWSNIIGGVDLIKKHEQGDAYGMTFALLTTADGIKMGKSQKGAVW 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATE 305
           L+KE TSP+  +QY RN+DD DV  F  +LT LP +E  ++ +  +  EIN+AK+I+A E
Sbjct: 249 LDKEKTSPFEMFQYMRNVDDRDVEKFLLQLTFLPTAECRKLGQATEAAEINKAKEILAYE 308

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  +VHG+EEA+ A  AA   F        MPT  IS  ++ +G  LL L+ + G   S 
Sbjct: 309 VVKLVHGKEEADAALDAAKALFSGKGDESAMPTTQISASDLPKG--LLALMTEVGLTKSN 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR ++   + IN+  I++   ++  + F+    I +  GKKN     L 
Sbjct: 367 GEARRTVQQGGVSINDEKITDPAFEVTEEIFEDNR-IIIKKGKKNFHKVELA 417


>gi|126651336|ref|ZP_01723543.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591865|gb|EAZ85948.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 422

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 142/428 (33%), Positives = 238/428 (55%), Gaps = 20/428 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ L  L  RG ++Q ++   +  L  +  V+ Y G D TA S+H GH+  L+ L   
Sbjct: 1   MTNELLQDLEWRGLLYQQTDADGMAKLLEEQSVSLYCGVDPTADSMHIGHIVPLLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+G       +      A
Sbjct: 61  QKAGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRGQLERIFDFAEAGNGA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D
Sbjct: 121 QLVNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGID 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           +  L  +Y+CR+Q+GGSDQWGNI  G+++  +      K F +T PL+T A GTK GKT 
Sbjct: 179 YNHLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTA 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAK 299
            GA+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +   + +A+
Sbjct: 239 GGAVWLDGKKTSPYEFYQFWINAADADVIKYLKIFTFLTREEIEALAVSVEEEPHLRKAQ 298

Query: 300 KIIATEITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRG 349
           K +A E+T ++HG+E  E+A             A+   +M    + +P+I ++K++    
Sbjct: 299 KALAEEMTRLIHGQEALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKED---- 354

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V+AG ++S  +AR  + + AI +N   +++ +     +D        +  GKK
Sbjct: 355 KNIVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTDLEYVFGAKDRLEDAFSIVRRGKK 414

Query: 410 NHIICHLC 417
            + +    
Sbjct: 415 KYHMVKFV 422


>gi|86134694|ref|ZP_01053276.1| Tyrosyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821557|gb|EAQ42704.1| Tyrosyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 430

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 142/433 (32%), Positives = 225/433 (51%), Gaps = 23/433 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG +H      E      + + +AY+G+D TA SLH G+L  +MLL   Q
Sbjct: 1   MKNFIEELQWRGMLHDSMPGTE--EHLLEEMRSAYVGFDPTADSLHIGNLVPIMLLAHYQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDA 123
           + GH+PI+L+GG T +IGDPS +   R ++    ++ N E +K     F+ +    K  A
Sbjct: 59  RCGHRPIALVGGATGMIGDPSGKSAERNLLDETTLRHNQECVKAQLGHFLDFTSNEKNAA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQA 181
           +++NN  W+  I +++ +R+IG   +VN M++ +SV++R+  + +  +SF EF Y ++Q 
Sbjct: 119 ILVNNYDWMKDISFLEFIRDIGKHITVNYMMAKDSVKNRISSESKDGMSFTEFTYQMVQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +     +QMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK+ 
Sbjct: 179 YDFLHLFRENSTTIQMGGSDQWGNITTGTELIRRIGNGKGYAITCPLITKSDGSKFGKSE 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
            G +WL+   TSPY F+QYW N  D D   + K  T L    ID       +       +
Sbjct: 239 GGNVWLDANRTSPYKFYQYWLNTSDEDAEKYIKIFTFLDKETIDALVAEHKEAPHTRILQ 298

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDE 345
           K +  E+T +VHG++E EKA  A+   F  S                   +P  +++   
Sbjct: 299 KRLGEEVTVLVHGKDEYEKAIKASNILFGKSTASDLKSLDEKTLLDIFDGVPQATVTASL 358

Query: 346 VSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           V  G+ ++  +  +  F  S  EARR LK NAI +N   +  E   I  +D      + L
Sbjct: 359 VENGLDMIAALAAETNFLKSNGEARRALKENAISVNKEKVK-EDFVITKEDLIDKKYVLL 417

Query: 405 SFGKKNHIICHLC 417
             GKK + +  + 
Sbjct: 418 QRGKKTYYLLIVA 430


>gi|260576399|ref|ZP_05844390.1| tyrosyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021470|gb|EEW24775.1| tyrosyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 416

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 197/410 (48%), Positives = 275/410 (67%), Gaps = 2/410 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++  RGF+   ++ +  D    +GVV  YIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFLHVMMSRGFLADCTDYQGFDDALVKGVVPGYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI LMGGGT+ +GDPSFR + R ++   +I ENI  I+ +F++++ +G G  DAL
Sbjct: 66  KTGHKPIVLMGGGTTKVGDPSFRADERPLLSPAQIDENIAGIRAVFANYVTFGNGPQDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ Y+D LR+IG  FS+NRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MVNNAEWLDALNYLDFLRDIGRHFSINRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C +QMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 LELNRRYGCLVQMGGSDQWGNIVNGIDLTRRVLDTQIYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK ++A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECERLGALAGSEINAAKIVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT+ HG E    A   A E F+       +PT+ ++ +++  G+ +  L V++G A S
Sbjct: 306 AVTTLCHGAEATLAAEATAREVFEKGGVGDDLPTLLLNAEDMGDGISVAQLFVRSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +A+R +     ++N+ ++ +  + +          +KL+ G+K H + 
Sbjct: 366 GKDAKRLIAEGGARLNDELVLDPGMVLHASALAEP--VKLTAGRKRHALV 413


>gi|253732378|ref|ZP_04866543.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253723900|gb|EES92629.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 420

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 228/428 (53%), Gaps = 23/428 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L
Sbjct: 1   MTNV---LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT  
Sbjct: 58  RRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDH 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQ
Sbjct: 118 -GAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGK 239
           A DF  L +  +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK
Sbjct: 175 AIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + SGA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + E
Sbjct: 235 SESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLRE 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS 347
           A+K +A E+T  +HG +    A   +   F                + +P +++S    +
Sbjct: 295 AQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLS----N 350

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ ++++ G + S  +AR  + + AI IN     +    +  +D        +  G
Sbjct: 351 DTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAQEDKIDGEFTIIRRG 410

Query: 408 KKNHIICH 415
           KK + + +
Sbjct: 411 KKKYFMVN 418


>gi|229828792|ref|ZP_04454861.1| hypothetical protein GCWU000342_00866 [Shuttleworthia satelles DSM
           14600]
 gi|229793386|gb|EEP29500.1| hypothetical protein GCWU000342_00866 [Shuttleworthia satelles DSM
           14600]
          Length = 427

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 168/409 (41%), Positives = 250/409 (61%), Gaps = 7/409 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 23  LYDELVARGLIAQLTDEERIKDLINHGRATFYIGFDPTADSLHVGHFMALTLMKRLQMGG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT++IGDPS R + R MM  ++I  N E  K   S FI++G     ALM+N
Sbjct: 83  NRPIALIGGGTAMIGDPSGRTDLRSMMTVEQIDHNCECFKKQMSRFIEFGED--KALMVN 140

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ ++D +RE+G+ FSVN ML   +  +R+  E+ LSFLEF+YM++QAYDF +L
Sbjct: 141 NADWLRNLNFLDFMREVGAHFSVNDMLRARAYVNRM--ERGLSFLEFSYMLMQAYDFYKL 198

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  +       A+T  LL    GTKMGKT  GA+WL
Sbjct: 199 YQEYGCNMEFGGDDQWSNMLAGTELIRKKLGEDAAAMTINLLLKHDGTKMGKTAGGAVWL 258

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSPY+F+QYWRN+DDADV+ F + +T LP+ +ID M + +G ++NEAK+I+A E+T
Sbjct: 259 DPGKTSPYDFFQYWRNVDDADVLKFLRMMTFLPLEQIDEMDRWEGAQLNEAKRILAHELT 318

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG EEA+KA  AA   F   + S +MP   + +++   G + +L+++V  G A S +
Sbjct: 319 AMVHGEEEADKAQEAAKSLFAGGVSSDNMPQAVVREEDFKEGEIDILSVLVLCGLAQSRS 378

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +ARR ++   + +N   +++     +  DF       L  GKK +    
Sbjct: 379 DARRAVEQGGVSVNGDKVTDIHTSYRPSDFAE--EFLLRRGKKKYCKIT 425


>gi|307710186|ref|ZP_07646630.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619166|gb|EFN98298.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 418

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 149/417 (35%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVNGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R      + +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGYVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +            +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLLGVPNYHVQADEDHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I N    +   D        +  GKK + +  
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQNLDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|261366954|ref|ZP_05979837.1| tyrosine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571072|gb|EFB76607.1| tyrosine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 406

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 168/410 (40%), Positives = 249/410 (60%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   IYDELKARGLIAQVTDEEEIKELINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT++IGDPS R + R+M+  ++I  N E  K     F+++G G   ALMLN
Sbjct: 63  NRPIALIGGGTTMIGDPSGRSDMRKMLTKEDIAHNAECFKRQMERFVEFGEG--KALMLN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLRE+G+ FSVN ML  E  + R+     LSFLEFNYMI+Q+YDF  +
Sbjct: 121 NADWLLNLNYVELLREVGACFSVNNMLRAECYKQRMVN--GLSFLEFNYMIMQSYDFYYM 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 179 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLNKDAYAMTITLLTDSQGKKMGKTAGNAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ +ID M   QG+++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDADVLKCIRMLTFLPLEQIDEMDHWQGEQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG+ EAEKA   A   F  +   ++MP+  +    V  G +GLL  +V AG   S  
Sbjct: 299 KMVHGKAEAEKAQQTARGLFSGAADHENMPSTVLDASLVKDGAVGLLAAMVAAGLCGSNR 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EAR+ ++   + ++    ++ K+ +  +   +   + +  GKK +    L
Sbjct: 359 EARQLVQQGGVLVDGEKANDPKMTLSEEALRAG--VVIKKGKKVYHKVML 406


>gi|228474511|ref|ZP_04059244.1| tyrosine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228271540|gb|EEK12902.1| tyrosine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 420

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 232/421 (55%), Gaps = 12/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   M L   
Sbjct: 1   MSNALLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +    ++ +N+E +        ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNRDWLSQISLISFLRDHGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E T+PY F+Q+W N  D DV+ F K  T L   +I+R+ +   +   + EA+K
Sbjct: 238 GAVWLDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLT 354
            +A  +T  +HG+E  + A   +   F   + S  +  I      + + EVS+    ++ 
Sbjct: 298 ALAENVTEFIHGKEALDDAIRISEALFKGDLKSLSIKDIKAGFKEVPQVEVSKATTNIID 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +++++G A+S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIESGIASSKRQAREDVNNGAIYINGEREQSVDYNLTDEDKFDNEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|314936172|ref|ZP_07843519.1| tyrosine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654791|gb|EFS18536.1| tyrosine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 420

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 231/421 (54%), Gaps = 12/421 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
                L  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   M L   
Sbjct: 1   MSKALLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +    ++ +N+E +        ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNRDWLSQISLISFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E T+PY F+Q+W N  D DV+ F K  T L   +I+R+ +   +   + EA+K
Sbjct: 238 GAVWLDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLT 354
            +A  +T  +HG+E  + A   +   F   + S  +  I      + + EVS+    ++ 
Sbjct: 298 ALAENVTEFIHGKEALDDAIRISEALFKGDLKSLSIKDIKAGFKEVPQVEVSKATTNIID 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +++++G A+S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIESGIASSKRQAREDVNNGAIYINGEREQSVDYNLTDEDKFDNEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|89893035|ref|YP_516522.1| hypothetical protein DSY0289 [Desulfitobacterium hafniense Y51]
 gi|123280260|sp|Q251G4|SYY_DESHY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|89332483|dbj|BAE82078.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 420

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 233/422 (55%), Gaps = 14/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L        +T Y G+D TA SLH GHL  +++L   Q  
Sbjct: 2   NILDDLKARGLVYQTTDEEALYKRLES-PMTLYCGFDPTADSLHIGHLLPVLMLRRFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS +   R +  ++ +QE   +IK   S F+ +      A+M 
Sbjct: 61  GHCPIALVGGGTGLIGDPSGKTSERTLNPTEVVQEWANRIKEQLSCFLDFEGVGNPAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  I+ LR+IG  FS+  ML+ ESV SR+   + +SF EF+Y ILQ+YDF++
Sbjct: 121 NNYEWLGTINVIEFLRDIGKNFSLGSMLAKESVESRM--SRGISFTEFSYQILQSYDFLK 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L + Y C +Q+GGSDQWGNI  G DL  R+   +  ++  LT PL+T + GTK GKT  G
Sbjct: 179 LNELYGCEMQIGGSDQWGNITSGTDLIRRMSVGEDRQVHGLTVPLVTKSDGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+++ TSPY F+Q+W N DD DVV +    T L + EI           E   A+++
Sbjct: 239 AVWLDQDKTSPYKFYQFWINTDDRDVVKYLNFFTFLSIEEIQGLAQEVESQPEKRNAQRM 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTL 355
           +A E+T +VHG E  E+A   +   F   I +     +      +   +V    M L+  
Sbjct: 299 LAKEVTELVHGVEARERAEKISQALFTGGIANLTAKEVEEGFSDVPSADVEDQEMLLVDA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++K G  +S  +AR  ++S A+ +N    ++  L +   D   +  I +  GKKN+ +  
Sbjct: 359 LIKVGAVSSRRQARESMESGAVYVNGIRQTDTTLTVAQLDKIESRFIVIRRGKKNYYLVK 418

Query: 416 LC 417
           L 
Sbjct: 419 LV 420


>gi|282882790|ref|ZP_06291395.1| tyrosine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297201|gb|EFA89692.1| tyrosine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 423

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 169/413 (40%), Positives = 261/413 (63%), Gaps = 5/413 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +   +L ERGFI  +++   L  +  +  +  YIG+D TA SL  GH  Q+ ++  +
Sbjct: 15  MTKNVFDVLKERGFIDSVTDEENLKDVLEKEKIKFYIGFDATADSLTLGHFLQIRVMQHM 74

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH P++L+GGGT+ IGDPS +++ R++M  Q I  N +  K   S F+ +  G    
Sbjct: 75  QKQGHIPVALLGGGTTSIGDPSGKNDMRKLMDRQTIDHNAKCFKEQISRFVDFSDG--KG 132

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++LNN  WL ++ +++ +R IG  FSVNRML+F+  ++R+  E+ L+F EF+YM++Q+YD
Sbjct: 133 MILNNGDWLLNLNFLEFMRTIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFSYMLMQSYD 190

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +NY  +L++GGSDQW NII G +L  +L+  K+F +T  LL TA+G KMGKT  G
Sbjct: 191 FLHLYRNYGVKLELGGSDQWSNIIGGYELVRKLEEEKVFGMTFKLLITANGVKMGKTEKG 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWL+KE TSPY  +QY RN DD DV+ F K LT L M EI    KL+G+E+N+AK+++A
Sbjct: 251 AIWLSKEKTSPYEMFQYLRNTDDRDVIKFLKLLTLLDMDEIKEYEKLEGQELNKAKEVLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+   VHG +EA+KA  A+   F     ++++P+  ++K+ +  G+G+L ++ + GF+ 
Sbjct: 311 YEVVKDVHGEDEAKKALEASKAMFGGQKTAENIPSTLMNKESLQEGIGILNILTEIGFSK 370

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +EARR +    I IN+  I++  L I L  F     I L  GKK +   +L
Sbjct: 371 TNSEARRLINQGGISINDEKITDPALIITLDKFKDD-EIILRKGKKLYHKINL 422


>gi|76786955|ref|YP_328889.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77410981|ref|ZP_00787337.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|97202132|sp|Q3K3L4|SYY_STRA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76562012|gb|ABA44596.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77163036|gb|EAO73991.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 419

 Score =  366 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 148/418 (35%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFDELKERGLVFQTTDEDALRKALEEGFVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIV 357
           E+ T+VHG +  ++A     + F  +I    +  +            +    + ++ L+V
Sbjct: 300 EVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + +
Sbjct: 360 TSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLN 417


>gi|291531956|emb|CBK97541.1| tyrosyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 404

 Score =  366 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 174/408 (42%), Positives = 253/408 (62%), Gaps = 10/408 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYEELIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  G   AL++N
Sbjct: 63  NKPIALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDG--KALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D+LRE+G+ FSVN+MLS E  + R+  E+ LSFLEFNYMI+Q+YDF +L
Sbjct: 121 NADWLLSLNYVDVLREVGACFSVNKMLSAECYKQRM--ERGLSFLEFNYMIMQSYDFYKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+Y C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YKDYGCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+++A E+T
Sbjct: 239 DPEKTSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEMLAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  
Sbjct: 299 KLVHGEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKR 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EAR ++    I +N+  +++    I++ +F       +  GKK++   
Sbjct: 359 EARTNVTGGGISVNDEKVTDPAAMIEIGEF-----AVIKKGKKSYCKI 401


>gi|332878166|ref|ZP_08445895.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683904|gb|EGJ56772.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 431

 Score =  366 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 149/434 (34%), Positives = 226/434 (52%), Gaps = 24/434 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L   Q
Sbjct: 1   MKNFIEELRWRGMIQDIMPETE--QHLMEGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           K GHKP +L+GG T +IGDPS +   R ++  + +  NI+ I+   + F+ +       A
Sbjct: 59  KCGHKPYALVGGATGMIGDPSGKSAERNLLTEEVLAHNIKGIQKQLAKFLDFESEAPNRA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
            ++NN  W+    ++  +R+IG   +VN M++ +SV+ R         +SF EF+Y +LQ
Sbjct: 119 ELVNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +     LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+
Sbjct: 179 GYDFLHLYRQKGLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
             G +WL+ E TSPY F+QYW N+ D D   + K  T L   EI+++         +   
Sbjct: 239 EGGNVWLDAEKTSPYKFYQYWINVSDEDAQRYIKIFTMLSREEIEQLISEHQAAPHLRVL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +  +A E+T +VHGREE +KA  A+   F  S                   +P   +++ 
Sbjct: 299 QNKLAEELTVLVHGREELQKAQKASQILFGNSTSDDLRQLDAKTFLEVFDGVPQAEVTRA 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +++ G+ ++  +  K  F  S +EARR LK  +I +N   +  E   I  +D      + 
Sbjct: 359 DIAAGLDMIAALSAKTSFIASNSEARRALKEKSIAVNKEKVE-ESYIIGEKDIIDDKFVL 417

Query: 404 LSFGKKNHIICHLC 417
           L  GKKN+ +  + 
Sbjct: 418 LQRGKKNYFVIVIV 431


>gi|117928461|ref|YP_873012.1| tyrosyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|189083639|sp|A0LUB6|SYY_ACIC1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|117648924|gb|ABK53026.1| tyrosyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 426

 Score =  366 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 139/417 (33%), Positives = 216/417 (51%), Gaps = 12/417 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L+ RG I Q ++   L    + G +T Y G+D TA SLH GHL Q++ L   Q
Sbjct: 1   MTHLLDDLAWRGLIAQSTDLEALRAAMNTGPITVYCGFDPTAPSLHIGHLVQILTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--GTGKTD 122
             GH+PI+L+GG T +IGDPS R   R +     +    E+I    + F+ +        
Sbjct: 61  DAGHRPIALVGGATGLIGDPSGRTTERALNDPDVVAGWAERIHRQLAPFLDFTGERAGQP 120

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+ +NN  W   +  I+ LR++G  F V RML+ E V +RL+ EQ +S+ EF+Y ILQ+ 
Sbjct: 121 AIAVNNLEWTGRLTAIEFLRDVGKHFRVGRMLAKEVVAARLRSEQGISYTEFSYQILQSL 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y C LQ+GG DQWGN+  GI+L  +++   + AL +PL+T A GTK GKT  
Sbjct: 181 DFLELYRRYRCVLQIGGIDQWGNLTSGIELIHKVEGVDVHALATPLVTKADGTKFGKTAG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
           GA+WL+  +TSPY F+Q+W N DD DV ++ +  +     E++ + K  G++      ++
Sbjct: 241 GAVWLDPALTSPYAFYQFWINTDDRDVPAYLRYFSLKNKDELEALEKDAGRDPAARLGQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE--------VSRGMGL 352
            +A E+TT+VHG  E  K   A+   F     +   P    +                 +
Sbjct: 301 ALAEELTTLVHGATECGKVVAASAALFGRGELAGVEPETLAAALAEAGLVTMPFDPPPRV 360

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +  +V  G   S + ARR +      +NN  +++   QI            +  G++
Sbjct: 361 VDALVATGLVESRSAARRVISEGGAYVNNEKVTDVDAQIDPGRLLHGRWAVIRRGRR 417


>gi|311740481|ref|ZP_07714308.1| tyrosine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304001|gb|EFQ80077.1| tyrosine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 419

 Score =  366 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 224/422 (53%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C    +  Y G+D T  SLHAGHL  L++L   Q  
Sbjct: 2   NIIDELQWRGLINQSTDLEALREACEN-PIALYCGFDPTGDSLHAGHLVPLIMLRRFQNA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP      R M+  +++  N+E IKG    FI +  G+  A M+
Sbjct: 61  GHHPIALAGGATGFIGDPRDVG-ERSMLSEEDLAHNLEAIKGQLRRFIDFD-GEQAATMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ DFV+
Sbjct: 119 NNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLEGD-GISYTEFSYMLLQSNDFVQ 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L +  DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T ASG K GK+  G  +
Sbjct: 178 LRRERDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDASGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E TS Y+++QY+ N  D+ V+ + +  T L   EI    +   +      A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYERAVEEEPYKRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    AA   F        D    +  +   ++++        ++ L
Sbjct: 298 QEMTDLVHGEEATKAVELAAQALFGKAELSELDEKTLAGALSETTVAEVAAGEPRTIVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     +NN  I + + +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAARRTIKEGGAYVNNQRIESAEWEPSAEDLLHGSWLVLRRGKKNFAGAK 417

Query: 416 LC 417
           L 
Sbjct: 418 LS 419


>gi|269795517|ref|YP_003314972.1| tyrosyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097702|gb|ACZ22138.1| tyrosyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 420

 Score =  366 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 224/420 (53%), Gaps = 12/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  L+ RG I Q ++   L      G VT Y G+D TA SLH GHL QL+LL  LQ
Sbjct: 1   MTNVLDELTWRGLISQTTDMDALREALDGGPVTYYCGFDPTAPSLHHGHLVQLVLLRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI+L+GG T +IGDP      R +   + + E +E+++   S F+ +  G   A 
Sbjct: 61  LAGHRPIALVGGATGLIGDPRM-SGERVLNSREVVGEWVERLRSQISRFLDFD-GDNPAQ 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID LR+IG  + +  ML+ ++V  RL+  + LSF EF+Y ILQ  D+
Sbjct: 119 MVNNLDWTGELTAIDFLRDIGKHYRMGTMLAKDTVARRLESSEGLSFTEFSYQILQGIDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQ GG+DQWGN++ G++L  + +   + ALT+PL+T A GTK GK+  GA
Sbjct: 179 LELNRRHGCTLQTGGNDQWGNLLSGVELVRKSEQRSVHALTTPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ EM SPY F+Q+W N DDADVV F K  T     EID   +A  +     EA++ +
Sbjct: 239 VWLDPEMMSPYAFYQFWLNADDADVVRFLKIFTFRSAEEIDELAVAVAERPAAREAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-------ISKDEVSRGMGLLTL 355
           A ++T++VHG    E A  A+   F        +   +       +   E + G  ++ L
Sbjct: 299 AGDVTSLVHGARATEAAVAASQALFGRGEL-SALDEATLVAAVAGLPSAEGAPGDLVVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+     S   ARR +    + +NN  +  +   +   D        L  GKK   +  
Sbjct: 358 LVETQLVASKGAARRAVAEGGVYVNNVKVVGDDATLAAADLLQGRAAVLRRGKKTLGVVT 417


>gi|253734487|ref|ZP_04868652.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253727541|gb|EES96270.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 420

 Score =  366 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 229/428 (53%), Gaps = 23/428 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L
Sbjct: 1   MTNV---LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT  
Sbjct: 58  RRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDH 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQ
Sbjct: 118 -GAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGK 239
           A DF  L +  +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK
Sbjct: 175 AIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + SGA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + E
Sbjct: 235 SESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLRE 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS 347
           A+K +A E+T  +HG +    A   +   F                + +P +++S    +
Sbjct: 295 AQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLS----N 350

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ ++++ G +TS  +AR  + + AI IN     +    +  +D        +  G
Sbjct: 351 DTTNIVEVLIETGISTSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRG 410

Query: 408 KKNHIICH 415
           KK + + +
Sbjct: 411 KKKYFMVN 418


>gi|94987712|ref|YP_595813.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94989592|ref|YP_597692.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94991581|ref|YP_599680.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|123080347|sp|Q1JJ25|SYY_STRPD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123257867|sp|Q1JE22|SYY_STRPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123258252|sp|Q1JNY0|SYY_STRPC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|94541220|gb|ABF31269.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94543100|gb|ABF33148.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94545089|gb|ABF35136.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 418

 Score =  366 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 223/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVLT 417


>gi|225867704|ref|YP_002743652.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259517026|sp|C0MEE0|SYY_STRS7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225700980|emb|CAW97715.1| putative tyrosyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 418

 Score =  366 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 140/418 (33%), Positives = 219/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G  F+VN M+S +SV+ R+  E  +S+ EF Y ++Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKHFTVNYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIW
Sbjct: 180 LNAKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +     +    A+K +A 
Sbjct: 240 LDAKKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG    ++A     + F  +I +     +      V          + ++ ++V
Sbjct: 300 EVVTLVHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  L++ AI +N   + N    +   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDLQNGAIYLNGERLQNLDYSLSTADRIDNQLTVIRRGKKKYAVLT 417


>gi|254386396|ref|ZP_05001701.1| tyrosyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194345246|gb|EDX26212.1| tyrosyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 421

 Score =  365 bits (937), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 135/423 (31%), Positives = 218/423 (51%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG     ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFALSTDEEALRKAFADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +   + +   + +++     F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNDPETVANWVNRLRSQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ +Q +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESDQGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN+  G+DL  R     K+ A+ +PL+  A GTK GK+ SG
Sbjct: 179 LELYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPHAKVHAMATPLMVKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-GKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ +      +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKTREELEELEAQTAERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVSRGMGLLTL 355
             E  T +    +   A  AA +          +           +   +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQCAAVIAASKALFGQGDLAELDEATLAAALSELPHAQVAEAGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 LAETGLVASKSAARRTVKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|111017956|ref|YP_700928.1| tyrosyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110817486|gb|ABG92770.1| tyrosine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 429

 Score =  365 bits (937), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 225/421 (53%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 8   NIIDELTWRGLIAQSTDLDALRRDLDAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G++PI L GG T +IGDP      R M  +  + E  ++I+G    F+ +    + A++ 
Sbjct: 68  GNRPIVLAGGATGLIGDPRDVG-ERTMNSADTVAEWADRIRGQLERFVDFDESPSGAIIE 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++ 
Sbjct: 127 NNMNWTGKLSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQANDYLH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAI 245
           L +++ C LQ+GGSDQWGNII G++L  R+    +  LT PL+T+A G K GK+   G++
Sbjct: 186 LRRSHGCSLQVGGSDQWGNIIAGVELNRRIDAESVHGLTVPLVTSADGKKFGKSTGGGSL 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL++EMTSPY ++QY+ N  DADV+ + +  T L   E+  +     +     EA++ +A
Sbjct: 246 WLDQEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTAEELAELETATAERPHAREAQRRLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG         A+   F  +             +   S+++       G++ L
Sbjct: 306 AEMTTLVHGEANTRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPAGIVDL 365

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S   ARR +K     +NN  IS+E       D      + +  GK+N     
Sbjct: 366 LVLSGLCESKGAARRTVKEGGASVNNQKISSEDWTPAPTDLLHGTWLVIRRGKRNFAGIK 425

Query: 416 L 416
           +
Sbjct: 426 V 426


>gi|306828225|ref|ZP_07461486.1| tyrosine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429603|gb|EFM32651.1| tyrosine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 418

 Score =  365 bits (937), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 223/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEVYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVLT 417


>gi|65322029|ref|ZP_00394988.1| COG0162: Tyrosyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 418

 Score =  365 bits (937), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + A  +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAXYVNGERTQALDYVVXEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|190568333|ref|ZP_03021241.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|190560589|gb|EDV14566.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
          Length = 418

 Score =  365 bits (937), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGD S +   R +     +    E IK   S+F+++   +  A M N
Sbjct: 63  HQPIALVGGGTGMIGDSSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGA 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|77406343|ref|ZP_00783406.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175048|gb|EAO77854.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 419

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 148/418 (35%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFDELKERGLVFQTTDEDALRKALEEGFVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIV 357
           E+ T+VHG +  ++A     + F  +I    +  +            +    + ++ L+V
Sbjct: 300 EVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + +
Sbjct: 360 TSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISXNDKLENEITVIRRGKKKYFVLN 417


>gi|302528030|ref|ZP_07280372.1| tyrosyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302436925|gb|EFL08741.1| tyrosyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 424

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 233/426 (54%), Gaps = 13/426 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
                L  LS RG I Q ++   L     +G +T Y G+D TA SLHAG+L  L++L   
Sbjct: 1   MSEHILDELSWRGLIAQSTDIDALRRELDRGPLTLYCGFDPTAPSLHAGNLVPLLMLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP   +  R +     + +   +I+G    F+ +    T A
Sbjct: 61  QRAGHRPIVLAGGATGMIGDPRD-NGERTLNTLDVVADWAGRIRGQLERFVDFDDSPTGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  W      ++ LR++G  FSVN ML+ E+V+ RL+ +  +S+ EF+Y++LQ+ D
Sbjct: 120 IVENNLDWTGKQNTLEFLRDVGKHFSVNVMLNRETVKRRLEGD-GMSYTEFSYLLLQSQD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           ++EL + + C+LQ+GGSDQWGN++ G+DL  R++     ALT+PL+T A G K GK+   
Sbjct: 179 YLELYRKHGCKLQVGGSDQWGNLVGGVDLIRRVEGGAAHALTAPLVTDAEGRKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKK 300
           G +WL+ E+TSPY ++QY+ N+ DADV+ + +  T L   EID +AK   +   +  A+K
Sbjct: 239 GNVWLDPELTSPYAWYQYFVNVGDADVLRYLRLFTFLDQEEIDALAKDTEERPHLRAAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG-------MGL 352
            +A E T +VHG ++  +   A+   F     +    PT+  +  EV  G         +
Sbjct: 299 RLAEEFTNLVHGEDQTRQVIAASQALFGRGELTGLDGPTLDAAMAEVPNGKVEPAGDATI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L++  G   S   ARR +K     +NN  I++E+ +    D      + +  GK+N  
Sbjct: 359 VDLLLAGGLVDSKGAARRTVKEGGAYVNNVKIADEEWKPSASDALHGRWLVVRKGKRNVA 418

Query: 413 ICHLCG 418
              + G
Sbjct: 419 GVRVGG 424


>gi|50913475|ref|YP_059447.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81372489|sp|Q5XE99|SYY_STRP6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50902549|gb|AAT86264.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 418

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 223/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSAFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVLT 417


>gi|302533702|ref|ZP_07286044.1| tyrosyl-tRNA synthetase [Streptomyces sp. C]
 gi|302442597|gb|EFL14413.1| tyrosyl-tRNA synthetase [Streptomyces sp. C]
          Length = 422

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 139/423 (32%), Positives = 227/423 (53%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEEALRKAFADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +   + +   + +++     F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNDPETVANWVNRLRTQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL  EQ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVAKRLDSEQGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN+  G+DL  R++    + A+ +PL+  A GTK GK+ SG
Sbjct: 179 LELYRRYGCTLQQGGSDQWGNLTAGLDLIHRVEPAAHVHAMATPLMVKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ +     +  ++  A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEAQTAERPQMRAAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG ++      A+   F     ++            +    V+    ++ L
Sbjct: 299 LAEELTTLVHGADQCAAVIAASKALFGQGELAELDEATLAAALSELPHARVTELAQVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S +  RR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAETGLVASKSAGRRTVKEGGAYVNNVKVTAEDAVPAPEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|226360087|ref|YP_002777865.1| tyrosyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226238572|dbj|BAH48920.1| tyrosyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 425

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 142/424 (33%), Positives = 224/424 (52%), Gaps = 13/424 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + +  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   
Sbjct: 1   MTENIIDELTWRGLIAQSTDLDALRRDLDAGPVTLYAGFDPTGPSLHAGHLVPLLALKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G++PI L GG T +IGDP      R M  +  + E  ++I+G    F+ +    + A
Sbjct: 61  QRAGNRPIVLAGGATGLIGDPRDVG-ERTMNSADTVAEWADRIRGQLERFVDFDDSPSGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 120 VIENNMNWTGKLSAIDFLRDVGKHFSVNVMLARDTVKRRLETD-GMSYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           ++ L +++ C LQ+GGSDQWGNII G++L  R+    +  LT PL+T+A G K GK+   
Sbjct: 179 YLHLRRSHGCSLQVGGSDQWGNIIAGVELNRRVDAASVHGLTVPLVTSADGKKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +     +     EA++
Sbjct: 239 GSLWLDPEMTSPYAWYQYFVNTGDADVIKYLRWFTFLSAEELAELETATAERPHAREAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGL 352
            +A E+TT+VHG         A+   F  +             +   S+++        +
Sbjct: 299 RLAAEMTTLVHGEANTRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPSSI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G   S   ARR +K     +NN  IS+E    +  D      + +  GK+N  
Sbjct: 359 VDLLVLSGLCESKGAARRAVKEGGASVNNQKISSEDWTPESGDLLHGTWLVVRRGKRNFA 418

Query: 413 ICHL 416
              +
Sbjct: 419 GVKV 422


>gi|255324652|ref|ZP_05365769.1| tyrosine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255298558|gb|EET77858.1| tyrosine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 419

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 224/422 (53%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C    +  Y G+D T  SLHAGHL  L++L   Q  
Sbjct: 2   NIIDELQWRGLINQSTDLEALREACEN-PIALYCGFDPTGDSLHAGHLVPLIMLRRFQNA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP      R M+  +++  N+E IKG    FI +  G+  A M+
Sbjct: 61  GHHPIALAGGATGFIGDPRDVG-ERSMLSEEDLAHNLEAIKGQLRRFIDFD-GEQAATMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ DFV+
Sbjct: 119 NNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLEGD-GISYTEFSYMLLQSNDFVQ 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L +  DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T ASG K GK+  G  +
Sbjct: 178 LRRERDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDASGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E TS Y+++QY+ N  D+ V+ + +  T L   EI    +   +      A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYERAVEEEPYKRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    AA   F        D    +  +   ++++        ++ L
Sbjct: 298 QEMTDLVHGEEATKAVELAAQALFGKAELSELDEKTLAGALSETTVAEIAAGEPRTIVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     +NN  I + + +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAARRTIKEGGAYVNNQRIESAEWEPSAEDLLHGSWLVLRRGKKNFAGAK 417

Query: 416 LC 417
           L 
Sbjct: 418 LS 419


>gi|58584506|ref|YP_198079.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75497988|sp|Q5GT37|SYY_WOLTR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58418822|gb|AAW70837.1| Tyrosyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 416

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 205/416 (49%), Positives = 283/416 (68%), Gaps = 2/416 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLF 61
             KS+FL+ + ERG++ Q +N   LD L  Q   V AYIG+D TASSLH G L Q+M+L 
Sbjct: 2   KHKSEFLNFIQERGYLCQCTNIEGLDQLLLQNNYVVAYIGFDCTASSLHVGSLIQIMMLR 61

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK G+KPI L+GG T+ IGDPS +D++R ++  ++I +NI  IK      + +  GK 
Sbjct: 62  HLQKFGYKPIVLLGGSTTKIGDPSGKDKARSVLPIEDINQNISGIKKALKKMVYFNDGKA 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A+++NN  WL SIKYID LR+IG+ FSVNRMLSF+S ++RL REQ+LSFLEFNYM+LQA
Sbjct: 122 GAIIVNNADWLDSIKYIDFLRDIGAHFSVNRMLSFDSAKTRLDREQNLSFLEFNYMLLQA 181

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL K Y CRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT+PLL +A G KMGKT 
Sbjct: 182 YDFAELNKKYGCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTTPLLLSAQGKKMGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           SG +WL+ +M  PY++WQY+RNIDD D+  F +  T LP+ EI ++  L+ +EINEAKK 
Sbjct: 242 SGTVWLDGDMLKPYDYWQYFRNIDDQDIGRFLRFFTDLPIDEIKKLESLKNQEINEAKKA 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +ATE+T + HG +EAE A ++A+  F+       +P  +I+K +V+ G+ L+ L+   G 
Sbjct: 302 LATEVTKICHGDKEAELAQSSAVSVFENGDS-SLLPDYTITKKQVANGISLIDLLHDIGL 360

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             S   A+R ++ N  K+N+  I++    I  + F     IKLS GKK HI   + 
Sbjct: 361 EPSKGAAKRLIQGNGCKVNDYTINDINYIINSKSFKDQSFIKLSAGKKRHIKVMVS 416


>gi|145295540|ref|YP_001138361.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140845460|dbj|BAF54459.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 420

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 144/423 (34%), Positives = 225/423 (53%), Gaps = 15/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L    S   +T Y G+D T  SLHAGHL  L++L   Q+ 
Sbjct: 2   NIIDELSWRGLINQSTDLEALREEAST-PITLYCGFDPTGPSLHAGHLVPLLMLRRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L GG T +IGDP      R M  +  +    E+I G  S F+ +  G+  A ++
Sbjct: 61  GHNPIVLAGGATGMIGDPRDVG-ERTMNSADTVSVWAERISGQLSRFVDFD-GEHAARLV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +  LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQA D+VE
Sbjct: 119 NNAEWTNEMSVVTFLRDVGKHFSLNTMLARDTVKRRLESD-GISYTEFSYMLLQANDYVE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAI 245
           L K + C LQ+GG DQWGNI+ G+DL  R+    + A+T PL+T + G K GK+   G++
Sbjct: 178 LNKRFGCTLQVGGGDQWGNIVSGVDLNRRVNGTSVHAVTVPLVTDSDGKKFGKSTGGGSL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L         +   +     EA++ +A
Sbjct: 238 WLDPEMTSPYAWYQYFINASDADVIRYLRWFTFLTQEELAELEVEVAERPFKREAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  E    AA            D    +  +   ++++ +      ++ L
Sbjct: 298 REMTNLVHGTEATEAVELAAQALFGRAELRDLDEKTLAASVSETAVAEIKAGEPRTIIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   A+R +K     +NN  I ++  +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAAKRAVKEGGAYVNNERIESDDWEPSAEDLLHGSWLVLRRGKKNFAGVQ 417

Query: 416 LCG 418
           + G
Sbjct: 418 ILG 420


>gi|323126353|gb|ADX23650.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 418

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 220/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNNKHNVTLQIGGSDQWGNMTAGTELLRRKADQTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIADIESQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-------GMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSADSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   +      +   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGERVQELDYTLSDTDKIDNQLTVVRRGKKKYAVLT 417


>gi|21909609|ref|NP_663877.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28894986|ref|NP_801336.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759440|sp|Q8K8W5|SYY_STRP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21903790|gb|AAM78680.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes MGAS315]
 gi|28810231|dbj|BAC63169.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes SSI-1]
          Length = 418

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 144/418 (34%), Positives = 223/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIESQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   I +   Q+   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRIQDLDYQLSNDDKIDDQLTVIRRGKKKYAVLT 417


>gi|149006933|ref|ZP_01830614.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149011956|ref|ZP_01833104.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147761534|gb|EDK68499.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147763911|gb|EDK70844.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|332071173|gb|EGI81668.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 418

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 223/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G   S  +AR  +++ AI +N   I      +   D        +  GKK + +  
Sbjct: 361 SGIVNSKRQAREDVQNGAIYVNGDRIQELDYVLSDADKLENELTVIRRGKKKYFVLT 417


>gi|306836020|ref|ZP_07469011.1| tyrosine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568109|gb|EFM43683.1| tyrosine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 428

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 151/430 (35%), Positives = 230/430 (53%), Gaps = 18/430 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++ +  L  RG I+Q ++   L    ++  ++ Y G+D T SSLHAGHL  L++L
Sbjct: 1   MSN-TTNIIDELQWRGLINQSTDLEALKEA-AESPISLYCGFDPTGSSLHAGHLVPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---G 117
              Q+ GH+PI+L GG T +IGDP      R M+  ++I EN++ IK    +F+ +   G
Sbjct: 59  KRFQRFGHRPIALAGGATGMIGDPRDVG-ERSMLSEEQIAENMQAIKDQLEAFVDFTEAG 117

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                A+M+NN  W   I  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM
Sbjct: 118 ESAIPAVMVNNADWTSQINVIEYLRDIGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA DFV L K YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K 
Sbjct: 177 LLQANDFVHLHKEYDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKF 236

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKE 294
           GK+  G  +WL+ ++T PY+++QY+ N  DA V+ + +  T L   EI        +   
Sbjct: 237 GKSTGGGKLWLDPQLTRPYSWYQYFINAGDAVVIDYLRWFTFLTQEEIAELARKVEEEPH 296

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-------DEVS 347
             EA++++A E+TT+VHG +   +A   A +        Q +   ++S         EV 
Sbjct: 297 KREAQRVLAREMTTLVHGEQAT-EAVELASQALFGKAELQDLDEATLSSALQETEIAEVG 355

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               +L L+V+AG   S   ARR +      +NN  I + +      D      + L  G
Sbjct: 356 PEATILDLLVEAGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPNSNDLLHGSWLVLRKG 415

Query: 408 KKNHIICHLC 417
           KK      + 
Sbjct: 416 KKRFAGARVV 425


>gi|154498035|ref|ZP_02036413.1| hypothetical protein BACCAP_02016 [Bacteroides capillosus ATCC
           29799]
 gi|150273025|gb|EDN00182.1| hypothetical protein BACCAP_02016 [Bacteroides capillosus ATCC
           29799]
          Length = 408

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 176/407 (43%), Positives = 246/407 (60%), Gaps = 6/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q+++  E+  L + G  T YIG+D TA SLH GH   LML+  LQK G
Sbjct: 3   IYDELKARGLVAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALMLMRRLQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT ++GDPS R + R MM  + IQ N E  K   S FI +  G   ALMLN
Sbjct: 63  NRPIALIGGGTGMVGDPSGRTDMRSMMTVETIQHNCECFKKQMSKFIDFSEG--KALMLN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 121 NADWLMKLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYHM 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +   C LQ GG DQW N++ G +L  R      +A+T  LL T+ G KMGKT  GA+WL
Sbjct: 179 FQTIGCNLQCGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLTSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T+PY F+QYWRNI DADV+   + LT LP+ +ID M K +G ++N AK+I+A E+T
Sbjct: 239 DPEKTTPYEFYQYWRNIGDADVLKCLRMLTDLPLEQIDEMDKWEGAQLNTAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VH  EEA KA  AA   F       +MPT +++ D+++ G + +L L++K G   S  
Sbjct: 299 KLVHSEEEAMKAQDAARALFSQGGDKANMPTTTLTADDLTDGAVAVLDLMLKCGLVPSKK 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           EARR ++   ++ +   I++        +    G I L  GKK +  
Sbjct: 359 EARRLVEQGGVEADGVKITDITRTFTADELSGEG-IILKKGKKVYHR 404


>gi|149371964|ref|ZP_01891283.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355104|gb|EDM43665.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 430

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 150/433 (34%), Positives = 234/433 (54%), Gaps = 23/433 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG +H +    E      + +  AY+G+D TA SLH G+L  +MLL + Q
Sbjct: 1   MKNFVEELQWRGMVHDVMPDTE--THLLEQMRAAYVGFDPTADSLHIGNLVPIMLLSFFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           ++GHKP++L+GG T +IGDPS +   R  +  + ++ N   ++   S F+ + +G   +A
Sbjct: 59  RSGHKPVALVGGATGMIGDPSGKSNERNFLDEKTLRHNQACVRKQLSQFLDFSSGAANEA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQA 181
           L++NN  W+    ++D +R++G   +VN M++ +SV+SR   +    LSF EF Y ++Q 
Sbjct: 119 LLVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKSRFSGENADGLSFTEFTYQLVQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L KN +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+ 
Sbjct: 179 YDFLHLFKNQNITLQMGGSDQWGNITTGTELIRRIGGGKGYALTCPLITKSDGSKFGKSE 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
            G +WL+ + TSPY F+QYW N  D D   + K  T L    ID   ++  +       +
Sbjct: 239 GGNVWLDPKKTSPYKFYQYWLNTSDEDAEKYIKIFTFLDKETIDALVVSHREAPHQRALQ 298

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDE 345
           K +A E+TT VH +E  E A  A+   F  S                 + +P   +S+ +
Sbjct: 299 KRLAQEVTTTVHSQEAYETAVAASEILFGKSTSEDLKKIDADTFLDIFEGVPQAEVSRQK 358

Query: 346 VSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++ G+ ++  L  + GF  S  EARR LK N+I +N   +  E   I   D  +   + L
Sbjct: 359 ITDGLDIIGGLAEQTGFLKSNGEARRALKENSISVNKEKVK-EGYSISEADLLNDRFVLL 417

Query: 405 SFGKKNHIICHLC 417
             GKKN+ I  + 
Sbjct: 418 QRGKKNYFIISVI 430


>gi|242242993|ref|ZP_04797438.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233594|gb|EES35906.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|319401041|gb|EFV89260.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 421

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 139/425 (32%), Positives = 226/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MTNALIEDLKWRGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +    +++ N++ +        ++ +    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFDSD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 QLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGYLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EI+R+ +   +   + EA+K
Sbjct: 238 GAVWLDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG    + A   +   F                + +P +++S    ++  
Sbjct: 298 ALAENVTKFIHGEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +++ G A+S  +AR  + + AI IN     +   ++  +D        +  GKK 
Sbjct: 354 NIIEALIETGIASSKRQAREDVNNGAIYINGERQQSVDYELSSKDLIEDEITIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|19745275|ref|NP_606411.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81633253|sp|Q8P2Y5|SYY_STRP8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19747371|gb|AAL96910.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes MGAS8232]
          Length = 418

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 144/418 (34%), Positives = 223/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIESEFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   I +   Q+   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRIQDLDYQLSNDDKIDDQLTVIRRGKKKYAVLT 417


>gi|300814031|ref|ZP_07094321.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511855|gb|EFK39065.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 409

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 170/413 (41%), Positives = 261/413 (63%), Gaps = 5/413 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +   +L ERGFI  +++   L  +  +  +  YIG+D TA SL  GH  Q+ ++  +
Sbjct: 1   MTKNVFDVLKERGFIDSVTDEENLKDVLEKEKIKFYIGFDATADSLTLGHFLQIRVMQHM 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH P++L+GGGT+ IGDPS +++ R++M  Q I  N +  K   S F+ +  G    
Sbjct: 61  QKQGHIPVALLGGGTTSIGDPSGKNDMRKLMDRQTIDHNAKCFKEQISRFVDFSDG--KG 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++LNN  WL ++ +++ +R IG  FSVNRML+F+  ++R+  E+ L+F EF+YM++Q+YD
Sbjct: 119 MILNNGDWLLNLNFLEFMRTIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFSYMLMQSYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +NY  +L++GGSDQW NII G +L  +L+  K+F +T  LL TA+G KMGKT  G
Sbjct: 177 FLHLYRNYGVKLELGGSDQWSNIIGGYELVRKLEEEKVFGMTFKLLITANGVKMGKTEKG 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWL+KE TSPY  +QY RN DD DV+ F K LT L M EI    KL+G+E+N+AK+++A
Sbjct: 237 AIWLSKEKTSPYEMFQYLRNTDDRDVIKFLKLLTLLDMDEIKEYEKLEGQELNKAKEVLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+   VHG EEA+KA  A+   F     ++++P+  ++K+ +  G+G+L ++ + GF+ 
Sbjct: 297 YEVVKDVHGEEEAKKALEASKAMFGGQKTAENIPSTLMNKESLQEGIGILNILTEIGFSK 356

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +EARR +    I IN+  I++  L I L  F     I L  GKK +   +L
Sbjct: 357 TNSEARRLINQGGISINDEKITDPALIITLDKFKDD-EIILRKGKKLYHKINL 408


>gi|313891059|ref|ZP_07824678.1| tyrosine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120422|gb|EFR43542.1| tyrosine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 420

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 220/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + +   KIKG  S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLDWSAKIKGQLSQFLDFENGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRRKSDKIAHVMTVPLITDASGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +     +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLQEIAEIEEAFNLARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I       +      V          + ++ ++V
Sbjct: 300 EVVTLVHGEEAYKQAVNITEQLFAGNIKQLSATELKQGLSNVPNYAVQTDDSLNIVDILV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +  +TS  +AR  +++ AI IN   + +    +   D        +  GKK + +  
Sbjct: 360 SSKISTSKRQAREDVQNGAIYINGERVQDLNYVLSDTDKIDGQLTAIRRGKKKYFVLT 417


>gi|326387950|ref|ZP_08209556.1| tyrosyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207996|gb|EGD58807.1| tyrosyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 409

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 207/417 (49%), Positives = 278/417 (66%), Gaps = 8/417 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KSD L +L+ERG IHQ+++   LD L  +G+V AY GYD TA SLH G+L  +MLL
Sbjct: 1   MSEYKSDLLRLLAERGHIHQLTDAEGLDKLACEGIVVAYNGYDATAPSLHIGNLASVMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI+LMGGGT+ +GDPS +DESR+++    I  NI  I  +F   + +    
Sbjct: 61  RRLQQAGHKPIALMGGGTTKVGDPSGKDESRKLLTQDAIASNIAGISQVFHRLLDFSDSP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+M+NN+ WL ++ YIDLLR +G  F+VNRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 121 TGAVMVNNDEWLSTLGYIDLLRTVGPHFTVNRMLTFDSVKLRLEREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA  + CRLQ+GGSDQWGNI+ GI+L  R+   +LF LT+PLLTTA G KMGK+
Sbjct: 181 AYDFRELALRHGCRLQLGGSDQWGNIVNGIELTRRMNGIELFGLTTPLLTTADGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN+EM   Y+FWQYWRN+DD DVV F K  T LP+ EI R+  LQG EIN AK 
Sbjct: 241 VNGAVWLNEEMLPSYDFWQYWRNVDDRDVVRFLKLFTDLPLDEIARLEALQGSEINAAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T +V G E A  A T A   F      Q +PT  +       G+G++  ++  G
Sbjct: 301 VLANEVTRLVRGEEAARAAETTAAATFAGGGLGQDLPTFEVG----PDGIGIIDALIGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           FA S  EA+R +     +++ + I++E   I      ++G  KLS GKK H I  + 
Sbjct: 357 FAASRGEAKRLIAGGGARLDGTAITDEAYHIT----LASGEAKLSSGKKKHGILRIA 409


>gi|302341738|ref|YP_003806267.1| tyrosyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638351|gb|ADK83673.1| tyrosyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 410

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 181/408 (44%), Positives = 253/408 (62%), Gaps = 2/408 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +     + RGFI Q S+ + L  L     VT YIG+D TA+SLH G L  ++ L  LQ+ 
Sbjct: 2   NLYDTYASRGFIEQCSDAQALRQLFQTERVTGYIGFDPTATSLHVGSLVPIISLMHLQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GGGT ++GDPS + E R+++  ++I +N+  ++   S F+ +G G+  A M+
Sbjct: 62  GHRPLVLVGGGTGMVGDPSGKTEMRKLLTIEQISQNVAALQNQLSRFLDFGPGQ--AQMI 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI+ LR+ G  FSVNRML  ESV+ RL +E  LSF+EFNYMILQAYDF+ 
Sbjct: 120 NNADWLLKLNYIEFLRDTGRHFSVNRMLQQESVKLRLAQETGLSFIEFNYMILQAYDFMY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L+   DC+LQMGG+DQWGNI+ GIDL  R+    +  LT PLLTTASG KMGKT +GAIW
Sbjct: 180 LSHAMDCKLQMGGNDQWGNIVMGIDLARRVHGNTVHGLTFPLLTTASGQKMGKTHAGAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYW N  D DV  F K  T LP+ +I  +A LQG  IN+AK+ +A E+
Sbjct: 240 LDPERTSPYEFYQYWVNTHDQDVERFLKLFTFLPLDQIAELAALQGAAINQAKQTLAREV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           TT+VHG++ A +A  AA   F     +  +P  +I +  +  G+   +L+V+ G A +++
Sbjct: 300 TTIVHGQQAAAEAQAAAQAAFAGQGDADGVPATNIDRATLQAGLPAFSLLVQTGLAKTSS 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +ARR +      +  + I      I L   +  G I L  GKK H   
Sbjct: 360 DARRLISQGGAYVGQNRIDAFDQIISLAHANPDGAIWLRAGKKKHHRI 407


>gi|329727870|gb|EGG64320.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 421

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 140/425 (32%), Positives = 227/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MANALIEDLKWRGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +    +++ N++ +        ++G+    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFGSD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 KLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGYLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EI+R+ +   +   + EA+K
Sbjct: 238 GAVWLDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG    + A   +   F                + +P +++S    ++  
Sbjct: 298 ALAENVTKFIHGEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +++ G A+S  +AR  + + AI IN     +   ++  +D        +  GKK 
Sbjct: 354 NIVEALIETGIASSKRQAREDVNNGAIYINGERQQSVDYELSSKDLIEDEITIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|291520360|emb|CBK75581.1| tyrosyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 406

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 172/409 (42%), Positives = 247/409 (60%), Gaps = 7/409 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  L ++G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTNEEEIKKLINEGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N E  K     FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTTMIGDPSGRTDMRKMLTREDIDHNAECFKRQMERFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+DLLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 121 NADWLLDLNYVDLLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYM 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C L+ GG DQW N++ G +L  R       A+T  LLT + G KMGKT   A+WL
Sbjct: 179 FQKYNCNLEFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLTDSQGKKMGKTAGNAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ EI +M   +G ++NEAK I+A E+T
Sbjct: 239 DPNKTTPFEFYQYWRNVGDADVLKCIRMLTFLPIEEIQKMDTWEGAQLNEAKDILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG EEA+KA  A+   F    +S+++PT ++S D+   G + +L ++V AG + S  
Sbjct: 299 QMVHGTEEADKAREASKALFAGGANSENIPTHTLSADDFRDGKVDILQILVSAGLSASRA 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR+++   + +N   + +     +   F       L  GKK+     
Sbjct: 359 EARRNVQQGGVSVNGEKVVDPFAAYEKSAFAE--EFLLKKGKKSFCKIE 405


>gi|30022732|ref|NP_834363.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|81433417|sp|Q817A2|SYY1_BACCR RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|29898291|gb|AAP11564.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 418

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++    + L  +  V  Y G+D TA SLH GH+  +++L   Q  G
Sbjct: 3   ILQDLEFRGLINQQTDDEGFEQLLEKESVKLYCGFDPTADSLHIGHMYPVLMLRRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M N
Sbjct: 63  HQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L
Sbjct: 123 NYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            +++ CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIW
Sbjct: 181 YQHHKCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +
Sbjct: 241 LDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVK 358
           E+T +VHG E  E+A   +   F  S+       I     +V           L+ L+V+
Sbjct: 301 EMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLVE 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 361 SKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|300781253|ref|ZP_07091107.1| tyrosine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532960|gb|EFK54021.1| tyrosine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 421

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 228/425 (53%), Gaps = 15/425 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ +  L  RG ++Q ++   L    +   +T Y G+D T  SLHAGHL  L++L   Q
Sbjct: 1   MANIIDELQWRGLVNQSTDLEALKD-QTANPITLYAGFDPTGPSLHAGHLVPLLMLRRFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI L GG T +IGDP      R M  +  +++  ++I G    F+ +  G   A+
Sbjct: 60  EAGHRPIVLAGGATGLIGDPREVG-ERSMNTADTVEDWAQRITGQLQRFVSFE-GDNAAV 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  I  LR+IG  FS++ MLS E+V+ RL+ +  +S+ EF+YM+LQA DF
Sbjct: 118 LVNNAEWTNDMSVISFLRDIGKHFSLSTMLSRETVKRRLEGD-GISYTEFSYMLLQANDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SG 243
           V+L + +DC LQ+GGSDQWGN++ G+DL  R+    + ALT PL+T + G K GK+   G
Sbjct: 177 VQLRRRHDCMLQIGGSDQWGNLVAGVDLNRRVDGASVHALTVPLVTDSEGKKFGKSTGGG 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           ++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  M     +     EA+K 
Sbjct: 237 SLWLDPEMTSPYRWYQYFVNTADADVIRYLRWFTFLTQDELAEMETEVEERPFKREAQKR 296

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLL 353
           +A E+T +VHG E  +    A+   F  +  S+         +    + + E      ++
Sbjct: 297 LAQEMTDLVHGPEATKAVELASQALFGRAELSELDEQTLAAAVSETDVFEVEAGAPRTIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V  G   S   ARR +K      NN  I +E  +   +D      + L  GKKN   
Sbjct: 357 DLLVGTGLVDSKGAARRAIKEGGAYANNERIESEGWEPAAEDLLHGSWVVLRRGKKNFAG 416

Query: 414 CHLCG 418
             + G
Sbjct: 417 VKVHG 421


>gi|139472959|ref|YP_001127674.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|189029778|sp|A2RC49|SYY_STRPG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|134271205|emb|CAM29421.1| putative tyrosyl-tRNA synthetase [Streptococcus pyogenes str.
           Manfredo]
          Length = 418

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 144/418 (34%), Positives = 224/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKTDDQLTVIRRGKKKYAVLT 417


>gi|120434482|ref|YP_860182.1| tyrosyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117576632|emb|CAL65101.1| tyrosyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 431

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 228/432 (52%), Gaps = 23/432 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + +F+  L+ RG +H      E     S+ + +AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MEKNFVEELNWRGMLHDSMPGTE--EHLSKDMRSAYVGIDPTADSLHIGHLVGVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q  GHKP +L+GG T +IGDPS +   R ++    ++ N   +K   S F+ + +  +  
Sbjct: 59  QLAGHKPYALVGGATGMIGDPSGKSAERNLLDEATLRHNQNSLKEQLSRFLDFESDIQNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A+++NN  W+    ++D +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q
Sbjct: 119 AVLVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKKRLSSESAEGMSFTEFTYQMVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLFREKNCTLQMGGSDQWGNITTGTELIRRIGDGKGYALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
             G IWL+   TSPY F+QYW N  D D   + K  T L   EI+ +           E 
Sbjct: 239 EGGNIWLDANRTSPYKFYQYWLNTSDEDAEKYIKIFTFLSKGEIESLITKHREAPHQREL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +K++  E+TTMVH   E E A  A+   F  S                 + +P   +S  
Sbjct: 299 QKVLGKEVTTMVHSEAEFENALAASEVLFGKSTADDFRKLDEATFLDIFEGVPQAEVSMS 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++  +  K  F  S  EARR LK N++ +N   +  E   I   D  +   + 
Sbjct: 359 DIEEGLDMIAALSAKTNFLNSNGEARRALKENSVSVNKEKVK-EDYTITSSDLINNKYVI 417

Query: 404 LSFGKKNHIICH 415
           L+ GKKN  I H
Sbjct: 418 LNKGKKNTYIIH 429


>gi|27468324|ref|NP_764961.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867255|ref|YP_188865.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|282875850|ref|ZP_06284717.1| tyrosine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366325|ref|ZP_06613005.1| tyrosine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81674179|sp|Q5HNH6|SYY_STAEQ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81843652|sp|Q8CS48|SYY_STAES RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27315870|gb|AAO05005.1|AE016748_239 tyrosyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637913|gb|AAW54701.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|281294875|gb|EFA87402.1| tyrosine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319563|gb|EFE59929.1| tyrosine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329737273|gb|EGG73527.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737483|gb|EGG73736.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 421

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 140/425 (32%), Positives = 227/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MANALIEDLKWRGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +    +++ N++ +        ++G+    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFGSD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 KLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGYLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EI+R+ +   +   + EA+K
Sbjct: 238 GAVWLDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG    + A   +   F                + +P +++S    ++  
Sbjct: 298 ALAENVTKFIHGEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +++ G A+S  +AR  + + AI IN     +   ++  +D        +  GKK 
Sbjct: 354 NIVEALIETGIASSKRQAREDVNNGAIYINGERQQSVDYELSSKDLIEDEITIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|261378444|ref|ZP_05983017.1| tyrosine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145228|gb|EEZ71646.1| tyrosine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 432

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 230/430 (53%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MTSIIQDLKSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G+  A+
Sbjct: 61  QAGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLTPFLSFE-GENAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YD
Sbjct: 120 MANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I
Sbjct: 240 AVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDQASGTKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTL 355
           +A E+T ++HG    + A   +   F     +             +   EVS G+ ++ +
Sbjct: 300 LAEEMTRLIHGEAALQAAQRISESLFAEDQSNLTESDFEQLALDGLPAFEVSDGINVVEV 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +VK G A+S  EAR  + S A+ +N                ++   +  +         +
Sbjct: 360 LVKTGLASSNKEARGFVNSKAVLLNGKPAETNNPNHAAERPDDACLLTDEHKRFGKYTIV 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 RRGKRNHALL 429


>gi|313888608|ref|ZP_07822273.1| tyrosine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845337|gb|EFR32733.1| tyrosine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 424

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 162/414 (39%), Positives = 250/414 (60%), Gaps = 5/414 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            F  +   ILSERG++ Q +   EL  +  +  V  YIG+D TA SL  GH  Q+ ++  
Sbjct: 15  EFMENVFDILSERGYLDQCTYEDELREMLGKESVPFYIGFDATADSLTLGHFIQIRVMQH 74

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           +Q  GH PI+L+GGGT+ IGDPS + + R +M  + I  N  + K   SSF+ +  G   
Sbjct: 75  MQNAGHVPIALLGGGTTTIGDPSGKSDMRSLMNRETIDYNARRFKEQISSFLDFSDG--K 132

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             + NN  WL  + +++ +REIG  FSVNRML F+  ++R+  EQ L+F EF+YM++Q+Y
Sbjct: 133 GYIENNADWLTKLNFLEFVREIGIHFSVNRMLQFDCYKNRM--EQGLTFFEFSYMLMQSY 190

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + + C+L++GGSDQW NI+ G +L  +L+  K++A+T  LLTTA+G KMGKT++
Sbjct: 191 DYLYLYRKHGCKLEVGGSDQWSNILGGYELVRKLEGDKVYAMTFKLLTTAAGIKMGKTMA 250

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GAIWL+ E T+PY  +QY RN DD DV+ F K LT LP+ +I    KL+G EIN+AK+++
Sbjct: 251 GAIWLDPEKTTPYEMFQYLRNCDDRDVIKFMKLLTMLPLDKIAEYEKLEGAEINKAKEVL 310

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+   +HG E A+ A  A+   F     S+ +P       +    +G+L L+ +    
Sbjct: 311 AYEVVKDIHGEEAAKAALDASHSLFGGDKASEDIPATEFEAAKFDEPVGILNLMTELRLI 370

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + +E RR +    + I++  I++ KL+I   +F   G I +  GKK +    +
Sbjct: 371 KTNSEGRRLITQGGVSIDDEKITDPKLEITKDNF-KDGEIIIRKGKKVYHKVII 423


>gi|227497666|ref|ZP_03927880.1| tyrosine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226832896|gb|EEH65279.1| tyrosine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 424

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 222/420 (52%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG I Q ++   L    ++G VT Y G+D TA SLH GHL  + ++  LQ
Sbjct: 1   MTDILDELQWRGLIAQHTDIDALRAALNEGSVTFYCGFDPTAPSLHHGHLVAVKVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDP  +   R +     +      ++    + + +  G   A 
Sbjct: 61  MAGHHPLALVGGATGLIGDPRAKG-ERSLNTKDVVAGWARSLQAQLENLLDFE-GDNPAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  +D LR++G  F +  MLS + V  RL  E+ +SF EF+Y ILQA D+
Sbjct: 119 IVNNLDWTGQMTAVDFLRDLGKHFRMGTMLSKDIVARRLASEEGISFTEFSYQILQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GKT  GA
Sbjct: 179 LELFRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGESVHVMTNPLITKADGTKFGKTEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWLN +M SPY F+Q+W  +DD DVV F K  T L   EI+R+ +         EA+K++
Sbjct: 239 IWLNPQMLSPYAFYQFWLRVDDVDVVRFLKVFTFLDREEIERLERATQDNPKAREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP------TISISKDEVSRGMG-LLTL 355
           A E+TT VHG    E A  A    +     S          T  +   ++  G   ++ L
Sbjct: 299 AREVTTWVHGAAAVESAEAATQALWGRGELSDLDEATVLQATADLPTAQLEVGRSTIVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG     + AR+ +      +NN  + +E   +   D  + G + +  G++N  +  
Sbjct: 359 LVAAGLEKGRSAARKTVAGGGAYLNNVKVEDEDRVVTKDDLLAGGVVLVRKGRRNLAVAR 418


>gi|294668559|ref|ZP_06733656.1| tyrosine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309522|gb|EFE50765.1| tyrosine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 432

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 227/430 (52%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MKSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+
Sbjct: 61  QAGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFE-GENAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YD
Sbjct: 120 MANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I
Sbjct: 240 AVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDQASGTKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T ++HG    + A   +   F            + +    +   EVS G+ ++  
Sbjct: 300 LAEEMTRLIHGEAALQAAQRISESLFAEDQSSLTEGDFEQLALDGLPAFEVSDGLNVVEA 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +VK G A+S  EAR  + S A+ +N                ++   +            +
Sbjct: 360 LVKTGLASSNKEARGFVNSKAVLLNGQAAESNNPNHAAERPDDAYLLTDAHKRFGKYTIV 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 RRGKRNHALL 429


>gi|327439210|dbj|BAK15575.1| tyrosyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 423

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 139/423 (32%), Positives = 229/423 (54%), Gaps = 13/423 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ L  L  RG ++Q ++   ++ L ++  V+ Y+G D TA S+H GH+  L+ L   
Sbjct: 1   MTNELLQDLEWRGLLYQQTDAEGMEKLLNEEKVSLYVGVDPTADSMHIGHIVPLLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           QK GH PI L+GG T  +GDPS R E R++    +I +N++ +K        + +     
Sbjct: 61  QKAGHTPILLVGGATGTVGDPSGRSEERQLQTMDQIDKNVQGLKKQMERLFDFSSDAANG 120

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  W+  +  ID LR+ G   +VN +L+ ++V SRL  +  +SF EF Y ++Q  
Sbjct: 121 AVLVNNNDWVGPMTLIDFLRDYGKLINVNYILNKDTVASRL--DSGISFTEFAYTLIQGI 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKT 240
           DF  L  +++ R+Q+GGSDQWGNI  G+++  +      K F +T PL+T A GTK GKT
Sbjct: 179 DFNHLYDHHNVRIQVGGSDQWGNITTGLEMIRKTHDENAKAFGITIPLVTKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
             GA+WL+   TSPY F+Q+W N  DADVV + K  T L   EI+   ++  +   + +A
Sbjct: 239 AGGAVWLDAAKTSPYEFYQFWINTADADVVKYLKIFTFLSREEIEGLAVSVEEEPHLRKA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGL 352
           +K +A E+T ++HG E  E A       F   + +  +  + +      S +       +
Sbjct: 299 QKALAEEMTRLIHGEEGLEAAERITKALFSGDLKALSVEEMKVAFSGVPSVEVAKEDKNI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + LIV+AG ++S  +AR  + + AI +N   I++ +  I  +D        +  GKK + 
Sbjct: 359 VELIVEAGISSSKRQAREDVTNGAISVNGEKITDLEYVIDAKDRLEDAFAIIRRGKKKYH 418

Query: 413 ICH 415
           +  
Sbjct: 419 MVK 421


>gi|251781560|ref|YP_002995861.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390188|dbj|BAH80647.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 418

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 221/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNNKHNVTLQIGGSDQWGNMTAGTELLRRKADKAGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIADIESQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-------GMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSADSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   +      +   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGERVQELDYTLSDTDKIDNQLTVVRRGKKKYAVLT 417


>gi|71902745|ref|YP_279548.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|97202245|sp|Q48VR3|SYY_STRPM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71801840|gb|AAX71193.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 418

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 223/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLFLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V          + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVLT 417


>gi|282861890|ref|ZP_06270953.1| tyrosyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282562915|gb|EFB68454.1| tyrosyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 422

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 140/421 (33%), Positives = 231/421 (54%), Gaps = 11/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G +P++L+GG T  IGDP      R +   + I   +++++G    F+ +  G   A 
Sbjct: 61  LAGLRPLALVGGATGQIGDPRP-TAERTLNDPETIAAWVDRLRGQIEPFLTFE-GPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  GIDL  R     ++ AL +PL+  A GTK GK+ SG
Sbjct: 179 LELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAQVHALATPLMVKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E+  + +   +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKSREELQELEQLTQERPQARSAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTL 355
           +A E+TT+VHG  +      A+   F     ++   PT+      +    V+    ++ L
Sbjct: 299 LAEELTTLVHGGAQCAAVIAASKALFGQGDLAELDEPTLGAALSEVPHARVTELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G + S + ARR +K     +NN+ +++ +     ++      + L  GKKN     
Sbjct: 359 LVEVGLSASKSAARRTVKEGGAYVNNAKVTDGEAAPAREELLHGRWLVLRRGKKNLAAVE 418

Query: 416 L 416
           +
Sbjct: 419 V 419


>gi|242374020|ref|ZP_04819594.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348271|gb|EES39873.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 420

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 145/425 (34%), Positives = 227/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MTNALIDDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +    +++ N++ +        ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVEANVQGLSKQMHRLFEFGTD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + F LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + EA+K
Sbjct: 238 GAVWLDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG E    A   +   F                + +P +++S    S   
Sbjct: 298 ALAENVTKFIHGEEALNDAIRISKALFSGDLKSLSGKELKEGFKDVPQVTLS----SETT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +++ G A+S  +AR  + + AI IN     +   +   +D        +  GKK 
Sbjct: 354 NIIEALIETGIASSKRQAREDVNNGAIYINGERQQSVDYEFSNEDKIDNEFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|302383296|ref|YP_003819119.1| tyrosyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193924|gb|ADL01496.1| tyrosyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 418

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 197/414 (47%), Positives = 274/414 (66%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +F+SDFL  L  RG+IHQ+++P ELD     GVV  YIG+D TA SLH G L Q+M+L 
Sbjct: 4   TSFQSDFLKTLQARGYIHQVTHPAELDAAAKAGVVAGYIGFDATAPSLHVGSLIQIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ G +P+ +MGGGT+ +GDP+ +D SR  +  + IQ NI  IK +F  F+ +G G T
Sbjct: 64  RLQQAGGRPVVIMGGGTTKVGDPTGKDASRPQLTDETIQSNIASIKTVFEKFLVFGDGPT 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N+ WL    Y++ LR+ G+ F+VNRML+F+SV+ RL+REQ ++FLEFNYM++Q+
Sbjct: 124 DAVMIDNDEWLSKYGYVEFLRDYGTHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQS 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + ++  LQMGGSDQWGNI+ G+DL  R+     F LT+PLLTTASG KMGKT 
Sbjct: 184 VDFLELNRRHNVTLQMGGSDQWGNIVSGVDLVRRVDHKAAFGLTTPLLTTASGGKMGKTA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ E+ R   LQG +INEAKK 
Sbjct: 244 QGAVWLNAEQLSPYDYWQFWRNAEDADVGKFMKLFTDLPLEEVARFEALQGADINEAKKA 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   TT++HG E A  A  AA   F+    S  +PTI +   EV   M L  +  +AG 
Sbjct: 304 LADAATTLLHGAEAAAAARAAAEGAFERGTLSTDLPTIDLPSGEVIGAM-LAAVATRAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             S  EARR  +   +++N+  I++    I+  D ++ G IKL+ GKK  ++  
Sbjct: 363 TASNGEARRLAQGGGLRLNDEAIADGARLIEASDVNADGVIKLAAGKKKLMLVR 416


>gi|262383070|ref|ZP_06076207.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295948|gb|EEY83879.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 430

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 141/428 (32%), Positives = 222/428 (51%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E      + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTE--EQLQKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +     A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ R   +    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|298370331|ref|ZP_06981647.1| tyrosine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281791|gb|EFI23280.1| tyrosine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 432

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 224/430 (52%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MKSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+
Sbjct: 61  QAGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFE-GENAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YD
Sbjct: 120 MANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I
Sbjct: 240 AVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTL 355
           +A E+T ++HG    + A   +   F                   +   EVS G  ++  
Sbjct: 300 LAEEMTRLIHGEAALQAAQRISESLFAEDQSHLTESDFEQLALDGLPAFEVSDGFNVVEA 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +VK G A+S  EAR  + S A+ +N                ++   +            +
Sbjct: 360 LVKTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIV 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 RRGKRNHALL 429


>gi|329117271|ref|ZP_08245988.1| tyrosine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907676|gb|EGE54590.1| tyrosine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 418

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 144/418 (34%), Positives = 222/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSNFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   AIW
Sbjct: 180 LNAKHNVTLQIGGSDQWGNMTAGTELLRRKSDKTGHVMTVPLITDATGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI+         +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEINAIEKTFDAARHERLAQKTLAC 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIV 357
           E+ T+VHG+   ++A     + F  +I       +      V          M ++ ++V
Sbjct: 300 EVVTLVHGKAAYDQAVKITEQLFAGNIKELSASELKQGLSNVPNYHVSSEANMNIVEMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG + S  +AR  + + AI +N   + +   Q++ +D        +  GKK + +  
Sbjct: 360 TAGISPSKRQAREDVSNGAIYVNGERLQDLDYQLQDEDKIDGQLTVIRRGKKKYAVLT 417


>gi|313206142|ref|YP_004045319.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445458|gb|ADQ81813.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022949|gb|EFT35972.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336413|gb|ADZ12687.1| Tyrosyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 430

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 157/432 (36%), Positives = 230/432 (53%), Gaps = 25/432 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            + F+  L  RG +H +    E   L ++ +  AYIG+D TA SLH G L  + +L   Q
Sbjct: 1   MNPFIEELKWRGLVHDMMPGTE--DLLNKEMTKAYIGFDPTADSLHIGSLIPIKILAHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           K GHKPI+L+GG T +IGDPS +   R ++    ++   E IKG  S  + + +     A
Sbjct: 59  KHGHKPIALVGGATGMIGDPSGKSAERNLLDEATLKHYEECIKGQLSRLLDFESDSPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
            ++NN  W+ SI +++  R+IG   +VN M++ +SV+ R   +   + +SF EF Y +LQ
Sbjct: 119 ELVNNYDWMKSISFLEFARDIGKHITVNYMMAKDSVKKRFSGDAGVEGMSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +N   +LQMGGSDQWGNI  G +L  R    + +ALT PL+T A GTK GK+
Sbjct: 179 GYDFLHLYQNQGVKLQMGGSDQWGNITTGTELIRRKAQGEAYALTVPLITKADGTKFGKS 238

Query: 241 LS-GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
            S   IWL+ + TSPY F+Q+W N  D D   F K  T L   EI+ +           +
Sbjct: 239 ESGENIWLDAKKTSPYRFYQFWLNATDEDAERFIKFYTFLNKEEIEALINEHREAPHERK 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            +K +A E+T+ VHG  E +K   A+   F  S                   +P   +S+
Sbjct: 299 LQKKLAQEVTSWVHGEAEYQKVVKASEILFGRSTAEDLVALDEATFLDIFDGVPQQELSR 358

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            E+  GM +  L+  +GF  S  EA+R LK NAI +N S + NE+  +  +DF     I 
Sbjct: 359 KEL-VGMNITDLLADSGFLKSKGEAKRELKGNAISVNKSKV-NEEFCLSEKDFIDDKFIL 416

Query: 404 LSFGKKNHIICH 415
           L  GKK++ I  
Sbjct: 417 LQKGKKSYFIVK 428


>gi|325102913|ref|YP_004272567.1| tyrosyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324971761|gb|ADY50745.1| tyrosyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 427

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 135/425 (31%), Positives = 223/425 (52%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E     S+G+V+ YIG+D TA SLH G L+Q+  L   Q+ 
Sbjct: 2   NFVEDLRWRGLIQDIMPGTE--EELSKGMVSGYIGFDPTAESLHVGSLSQIFTLVRFQQA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDP+ + + R ++  +E+ +N++ I+     F+ +  G   A ++
Sbjct: 60  GHKPLALVGGATGMIGDPTGKSQERNLLSEEELAKNLKGIQKQLEQFLDFDCGANSAEIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +  ++D +R+ G   +VN M++ +SV+ RL+ E  +SF EF Y ++Q +DF  
Sbjct: 120 NNYDWFKNYSFLDFIRDAGKHITVNYMMAKDSVKKRLESEVGMSFTEFTYQLIQGFDFYH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K  + +LQMGGSDQWGNI+ G +   R    + FALTSPL+  A GTK GKT  G IW
Sbjct: 180 LWKERNVKLQMGGSDQWGNIVTGTEFIRRKAQGQAFALTSPLIKKADGTKFGKTEGGNIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D DV ++ K  T +   E+D +     +   +   +K +A 
Sbjct: 240 LDPKRTSPYQFYQFWLNATDEDVKNYIKIFTFMTKEEVDALIAEHDQAPHLRVLQKSLAE 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVSRGM 350
           +IT  VHG +  + A       F                    + +    + +  +  G+
Sbjct: 300 DITRRVHGEQALQTALKTTDFLFGNGSLEFLNALSDEEVIGVFEGIAQFKVDRSAIDSGV 359

Query: 351 GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++L+ +      S  EA++ ++   + IN   +    + +   +  +   I    GKK
Sbjct: 360 DVVSLLAEKTQIFPSKGEAKKMIQGGGVSINREKVGGPDVIVSTANLVNNKFIVAQKGKK 419

Query: 410 NHIIC 414
           N+ + 
Sbjct: 420 NYFLI 424


>gi|46446803|ref|YP_008168.1| tyrosine-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25]
 gi|81626958|sp|Q6MC06|SYY_PARUW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46400444|emb|CAF23893.1| probable tyrosine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 425

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 148/425 (34%), Positives = 235/425 (55%), Gaps = 16/425 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ + +L ERGFI  +++        +   +  Y G+D TA SLH G+L  +M L W Q
Sbjct: 1   MTNVMDVLRERGFIDAVTSEEI--RQLTNQPIKVYCGFDPTADSLHLGNLVAIMGLAWFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH P++++GG T +IGDPS ++  R+++  ++IQ N++ I     + + +      A+
Sbjct: 59  RFGHTPVAIVGGATGMIGDPSGKNAERQLLDEKKIQLNLKGISKNLEAILDFNHPTAPAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W  +  +I  LR++G  F ++ ML+ +SV++RL  E+ +SF EF Y ILQ YDF
Sbjct: 119 ILNNLDWFKNFTFISFLRDVGKLFRLSPMLAKDSVKTRLNSEEGMSFTEFCYQILQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L +NY   +++GGSDQWGNI  G DL  ++     + +T PLLT + G K GK+  GA
Sbjct: 179 LHLFENYGVTVELGGSDQWGNITAGTDLIRKVHAKPAYGITFPLLTKSDGQKFGKSEKGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKI 301
           +WL+ +  S Y F+Q+   ++DADV++  + LT L M E    ++M K        A+K 
Sbjct: 239 VWLSPDKLSSYEFYQHLIRVEDADVINLMRMLTFLDMGEIRHYEQMMKEADYVPRTAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A EIT +VHG E  + A          S  S            MP+  +  + V     
Sbjct: 299 LAEEITRLVHGEEGLKIAIKVTEGVAPGSQTSLNADILEKLAADMPSCEMKLENV-LNKK 357

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ L+V+    TS +EARR L++  + INN  I +E   I ++   S+  I L+ GKKN 
Sbjct: 358 LIDLLVETKLQTSKSEARRLLRNGGVYINNKKIEDENHIISVECLISSRLILLAAGKKNK 417

Query: 412 IICHL 416
           +I  L
Sbjct: 418 MIIRL 422


>gi|299822730|ref|ZP_07054616.1| tyrosine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816259|gb|EFI83497.1| tyrosine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 473

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 155/421 (36%), Positives = 224/421 (53%), Gaps = 13/421 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + +  L  RG ++Q ++   L  L  +  +  Y G D +  S+H GHL   M+L   Q
Sbjct: 55  KMNIIEELKWRGAVYQQTDEEGLKELVEKESIALYCGIDPSGDSMHIGHLIPFMILRRFQ 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH PI L+GG T  IGDPS + E R++   ++IQ+N+E ++       ++  G   A 
Sbjct: 115 KAGHTPIVLVGGATGTIGDPSGKKEERQLQSIEQIQKNVEGLRSQLGQIFEFE-GAHAAK 173

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  +  +SF EF+Y ILQA DF
Sbjct: 174 MVNNYDWTKELSILDFLRDFGKEFNVNIMLSKDVVASRL--QNGISFTEFSYQILQAMDF 231

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L ++ DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GKT  
Sbjct: 232 LHLYQHEDCRLQIGGSDQWGNITAGLDLIRKKEGDKAKAFGLTIPLLTKADGTKFGKTEG 291

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GAIW+N+E T+PY F+Q+W N DD DVV + K  T L   EI       ++   + EA+K
Sbjct: 292 GAIWINREKTTPYEFYQFWINTDDRDVVKYLKYFTFLSQEEIAELEQKMIEAPHLREAQK 351

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLT 354
            +A EITT VH  E+  +A   +   F   I S     I     +V           L+ 
Sbjct: 352 KLAAEITTFVHSEEDLNQAIKISNALFSGDIASLTAEEIEQGFKDVPTIQATKEDAKLVD 411

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V++G   S  ++R  + + AI +N     + +  I   D      + +  GKK + + 
Sbjct: 412 WLVESGIEPSKRQSREDISNGAIYLNGERCQDLEKVISSSDRIEDKYLIIRKGKKKYFLI 471

Query: 415 H 415
            
Sbjct: 472 Q 472


>gi|184154544|ref|YP_001842884.1| tyrosyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227514191|ref|ZP_03944240.1| tyrosine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|254783611|sp|B2GF15|SYY_LACF3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|183225888|dbj|BAG26404.1| tyrosyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227087454|gb|EEI22766.1| tyrosine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 417

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 217/420 (51%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  
Sbjct: 2   NIIDELKWRGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS R   R +    ++++N++ +            G  +  ++
Sbjct: 62  GHKPVILIGGGTGAIGDPSGRKTERDLETRSKLEQNVQSLTKQMIRLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQA DF+ 
Sbjct: 118 NNYDWLSKFTMIDFLRDYGKLFNLNTMLNKEVVASRL--DAGISFTEFTYQILQAIDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N DD DVV + K  T L   EI              EA++ +
Sbjct: 236 VWLDPEKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+TT VHG+   ++A   +   F  +I       +        S +  +    ++  +
Sbjct: 296 AQEVTTFVHGQAATDQAEKISAILFSGNIQDLTTAEVEQAFAGTPSVEVSAEPANIVDWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  +K+ AI++N   +++ +  +          + +  GKKN+ +  +
Sbjct: 356 VDTKIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGKYVVIRRGKKNYTLAKV 415


>gi|256379450|ref|YP_003103110.1| tyrosyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255923753|gb|ACU39264.1| tyrosyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 427

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 135/427 (31%), Positives = 233/427 (54%), Gaps = 13/427 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L  L+ RG I Q ++   L      G +T Y G+D +A SLHAG+L  L++L
Sbjct: 1   MVRVSEHILDELTWRGLIAQSTDLDALREDLDSGPLTLYCGFDPSAPSLHAGNLVPLLML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+P+ L GG T +IGDP      R++     + E + +IKG    F+++  G 
Sbjct: 61  RRFQRAGHRPVILAGGATGMIGDPRD-TAERQLNPVDTVAEWVGRIKGQLERFVEFDDGP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+++NN  W   +  ++ LR++G  FSVN ML+ E+V+ RL  +  +SF EF+Y++LQ
Sbjct: 120 TGAIVVNNLDWTGPMPVLEFLRDVGKHFSVNVMLARETVKRRLASD-GMSFTEFSYLLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           ++D++ L +++   LQ+GGSDQWGN++ G+DL  +++   + A+T+PL+T + G K GK+
Sbjct: 179 SHDYLRLHRDHGVALQIGGSDQWGNLVGGVDLIRKVEGHAVHAMTAPLVTDSEGRKFGKS 238

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINE 297
              G +WL+  MTSPY ++QY+ N+ DA+V+ + +  + L   EI  + +       +  
Sbjct: 239 TGGGNVWLDPSMTSPYAWYQYFVNVGDAEVIHYLRLFSFLSREEIAELEEQTASAPHLRA 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG------- 349
           A++ +A   T +VHG+ E E+   A+   F      +  + T+  +  EV  G       
Sbjct: 299 AQRKLAELFTDLVHGQHEREQVVVASQALFGRGELRELDLSTLDAAMAEVPSGEVALADA 358

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L++    A S   ARR +K     +NN+ +++E+     +D      + +  GK+
Sbjct: 359 PTIVDLLIAGDLADSRGAARRAVKEGGAYVNNTKVTDEEWTPTAEDLLHGTWLVVRRGKR 418

Query: 410 NHIICHL 416
           N     +
Sbjct: 419 NFAGVKV 425


>gi|269956136|ref|YP_003325925.1| tyrosyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269304817|gb|ACZ30367.1| tyrosyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 419

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 140/413 (33%), Positives = 217/413 (52%), Gaps = 10/413 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG + Q ++   L    ++G +T Y G+D TA SLH GHL QL++L  LQ
Sbjct: 1   MTDVLDELQWRGLVAQTTDEAALRSALAEGPITYYCGFDPTAPSLHHGHLVQLVVLRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ ++L+GG T +IGDP  +   R +   + + +  E++K   S F+ +  G   AL
Sbjct: 61  LAGHRAVALVGGATGLIGDPR-QSGERVLNTKETVADWTERLKAQVSRFLDFE-GDNPAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W+  +  ID LR++G  + +  ML+ ++V  RL+ E+ +SF EF+Y ILQ  DF
Sbjct: 119 LVNNLDWISELSAIDFLRDVGKHYRLGTMLAKDTVARRLRSEEGISFTEFSYQILQGIDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +   LQ GG+DQWGN++ G++L  + +   +  LT+PL+T A GTK GKT  GA
Sbjct: 179 LELHRRHGVSLQTGGNDQWGNLLSGVELIRKAEGTAVHVLTTPLITKADGTKFGKTEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL  +M SPY F+QYW N  D DVV + K  T     EI  +     +     EA++ +
Sbjct: 239 VWLAPDMMSPYAFYQYWLNAADEDVVGWLKIFTFRSREEIAELETAVRERPGAREAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLI 356
           A+++TT+VHG    E    A+   F                   + +     G  ++   
Sbjct: 299 ASDVTTLVHGAAATEAVIAASQALFGRGELRDLDEATLRGAVAELPRTTAKPGDLIVDAF 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V AG   S   ARR +      +NN  +++E+   +  D        L  GKK
Sbjct: 359 VGAGLVASKAAARRAIGEGGAYVNNVKVTSEEQVFEAGDLLHGRYAVLRRGKK 411


>gi|326440396|ref|ZP_08215130.1| tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 428

 Score =  364 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 135/423 (31%), Positives = 213/423 (50%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG I Q ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q
Sbjct: 1   MTDIVDELQWRGLIAQSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G++P+ L+GG T +IGDP   +  R +   + + E + +++     F+ +      A 
Sbjct: 61  LAGNRPLGLVGGATGLIGDPKP-NAERTLNAPETVAEWVGRLRAQIERFLDFEGPY-AAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  D+
Sbjct: 119 MVNNLDWTSGLSAIDFLRDVGKYFRVNKMIAKEAVARRLNSDAGISYTEFSYQILQGMDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  G DL  R++    + AL +PL+T A GTK GKT SG
Sbjct: 179 LELYRRHGCTLQTGGSDQWGNLTAGTDLIHRVEPEAGVHALATPLITKADGTKFGKTESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKEINEAKK 300
            +WL+ E TSPY F+Q+W N DD DV  F +  +        E++R  + + +     + 
Sbjct: 239 TVWLDAERTSPYAFYQFWLNADDRDVAKFLRIFSFRSRAEIEELERQTEERPQARAAQRA 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTL 355
           +     T +    + A     A        +     PT+      + +  V     ++ L
Sbjct: 299 LAQELTTLVHGAEQCAAAEYAAKALFGQGELGELDEPTLRAALGELPRASVEELAPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             +AG A S + ARR +K     +NN  ++ E       D      + L  GKKN     
Sbjct: 359 FAEAGLAASKSAARRTVKEGGAYVNNVKVTTEDAVPSPGDLLHGRWLVLRRGKKNLAAIE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|254503054|ref|ZP_05115205.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439125|gb|EEE45804.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 425

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 188/413 (45%), Positives = 274/413 (66%), Gaps = 3/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              KS+ L++L ERG +HQ ++   LD   + G +TAY G+D TA+SLH GHL  LM L 
Sbjct: 13  TKLKSEALAVLLERGLVHQSTDLEALDKRLNDGPITAYAGFDATAASLHVGHLMPLMTLR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQ+ GH+PI ++GGGTS +GDPSFR+++R ++  ++I  N+  I+      +    G  
Sbjct: 73  WLQRLGHRPIVVLGGGTSQVGDPSFRNDARPLLEERQIAANMATIRRSVERLVDMD-GTE 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            AL+++N  WL   ++++ LR+ GS F+VNRM++F+SV+SRL  +  L+ LEF YM+LQA
Sbjct: 132 GALLVDNAEWLNEFRFLEFLRDYGSQFTVNRMMTFDSVKSRLDAQMPLTILEFCYMMLQA 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+ELAK +DC LQ+GGSDQWGNI+ G++LG R     L  LT PLLTTA+G+KMGKT 
Sbjct: 192 VDFLELAKRHDCVLQVGGSDQWGNIVNGVELGRRDGRK-LHGLTVPLLTTANGSKMGKTA 250

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           SGA+WL+ E  SP+ FWQ+WRN  DADV  F +  T LPM E++R+++LQG E+NEAKKI
Sbjct: 251 SGAVWLHPEHLSPFGFWQFWRNTADADVGKFLRLFTELPMREVERLSELQGAELNEAKKI 310

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +AT++T +VHG EEA  A       F         PT +++   ++ G+GLL L+V +GF
Sbjct: 311 LATQVTAIVHGPEEARVALEQGDALFSGDAELTE-PTHTMALSVLAEGVGLLELVVASGF 369

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A S  EARR ++   +++NN ++ + + +I   D  +   + LS GK+   + 
Sbjct: 370 AASNGEARRLVEGGGVRLNNRVVDDARRRISSGDLGANDRLSLSVGKRCKALI 422


>gi|285808375|gb|ADC35903.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 59]
          Length = 427

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 161/424 (37%), Positives = 243/424 (57%), Gaps = 15/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++     + RG ++  +    L  L ++  VTAYIG+D TASSLH G L  +M L  LQ+
Sbjct: 5   TNVYEEFTWRGMVYDGT--EGLSELFARERVTAYIGFDPTASSLHVGSLLPVMALARLQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+++GGGT +IGDPS + + R ++  ++I EN+  IK   S F+ +  G   A +
Sbjct: 63  FGHAPIAIVGGGTGMIGDPSGKAQERLLLTREQIDENVSGIKQQLSRFLDFDRGDNPARL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +   +  LR+ G +F+VN ML  ESV  RL+ E  +SF EF+Y++LQA DFV
Sbjct: 123 VNNSDWLAAFDLLGFLRDTGKYFTVNYMLQKESVNRRLESEDGISFTEFSYLLLQARDFV 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL   Y C +Q+GGSDQWGNI  GIDL  +L+  K   L  PL+TTASG K GKT +G I
Sbjct: 183 ELFDRYGCTMQLGGSDQWGNITAGIDLIRKLRAQKAHGLVMPLVTTASGVKFGKTEAGTI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+   TSP+ F+Q+W N DD DVV++ K  T L    ID    A     +  EA++++A
Sbjct: 243 WLDAARTSPFKFYQFWLNTDDRDVVTYLKFFTFLERPAIDALDAATKDAPQKREAQRVLA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVS-RGMGL 352
            E TT+VHG ++  +A  A+   F   I            + +P   +S D+ +  G+G+
Sbjct: 303 REATTLVHGADQVTRAEHASTMLFGEDIMALDADDVLAVFEDVPATELSADDFAGDGIGM 362

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+ +   A S ++ARR ++S  + +NN  +S+ + ++            L  G+K + 
Sbjct: 363 VDLVARVQLAASKSDARRLVQSGGVYVNNRRVSDVQARLTRDQAIGGRVFVLRKGQKQNH 422

Query: 413 ICHL 416
           +  L
Sbjct: 423 LVRL 426


>gi|239905130|ref|YP_002951869.1| tyrosyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794994|dbj|BAH73983.1| tyrosyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 425

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 221/422 (52%), Gaps = 12/422 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    LS RG +HQ S+  EL    S      Y G+D TA SLH G+L  LM L    K 
Sbjct: 2   NIFDELSWRGLVHQCSDEAELRKHLSSRDRVMYCGFDPTADSLHIGNLVPLMALARFAKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDPS +D+ R+M  +  +  + EKI+    +F +          +
Sbjct: 62  GHKPLFLLGGATGLIGDPSGKDKERQMRTADMVAASAEKIRSQAMAFFERQGVADRVTPV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W   I  I+ LR+ G  F++N M++ +SV+SR+ + +  +S+ EF+YMILQ+ D+ 
Sbjct: 122 NNLDWTQPISVIEFLRDTGKHFTINYMMAKDSVKSRIGREDTGISYTEFSYMILQSLDYE 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG DQ+GNI  G++L  R    + FALT PL+TTA+G K GK+  GAI
Sbjct: 182 YLNRTMGCTLQIGGGDQFGNITAGLELIRRKSGSQAFALTFPLITTATGAKFGKSEKGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           +LN  +TSPY F+QYW N DD DV +F +  T L    ID   +   +   +  A+K +A
Sbjct: 242 YLNTALTSPYAFYQYWINADDRDVCNFLRYFTYLSKEAIDALAVETAERPHLRAAQKTLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG---------MGLLT 354
            E TTM+HG EE  K        F              +  + + G           L  
Sbjct: 302 RETTTMIHGAEELAKVEAVTEALFGGGDLRTVDAATLRAALDAAPGKNYDALDVVPPLPK 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V      S ++AR+ +K+  I +NN  +++E   +   D+       L  GKKN+ + 
Sbjct: 362 LLVDLALCPSLSQARKDIKAGGIYLNNVRVADENQTLAASDYIGGNIALLRKGKKNYGVV 421

Query: 415 HL 416
            L
Sbjct: 422 TL 423


>gi|19552623|ref|NP_600625.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390291|ref|YP_225693.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|81760803|sp|Q8NQM8|SYY_CORGL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21324174|dbj|BAB98799.1| Tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325628|emb|CAF21417.1| TYROSYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 420

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 144/423 (34%), Positives = 226/423 (53%), Gaps = 15/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L    S   +T Y G+D T  SLHAGHL  L++L   Q+ 
Sbjct: 2   NIIDELSWRGLINQSTDLEALREEAST-PITLYCGFDPTGPSLHAGHLVPLLMLRRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L GG T +IGDP      R M  +  + +  E+I G  S F+ +  G+  A ++
Sbjct: 61  GHNPIVLAGGATGMIGDPRDVG-ERTMNSADTVSDWAERISGQLSRFVDFD-GEHAARLV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +  LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQA D+VE
Sbjct: 119 NNAEWTNEMSVVTFLRDVGKHFSLNTMLARDTVKRRLESD-GISYTEFSYMLLQANDYVE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAI 245
           L K + C LQ+GG DQWGNI+ G+DL  R+    + A+T PL+T + G K GK+   G++
Sbjct: 178 LNKRFGCTLQVGGGDQWGNIVSGVDLNRRVNGTSVHAVTVPLVTDSDGKKFGKSTGGGSL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L         +   +     EA++ +A
Sbjct: 238 WLDPEMTSPYAWYQYFINASDADVIRYLRWFTFLTQEELAELEVEVAERPFKREAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  E    AA            D    +  +   ++++ +      ++ L
Sbjct: 298 REMTNLVHGTEATEAVELAAQALFGRAELRDLDEKTLAASVSETAVAEIKAGEPRTIIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   A+R +K     +NN  I ++  +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAAKRAVKEGGAYVNNERIESDDWEPFAEDLLHGSWLVLRRGKKNFAGVQ 417

Query: 416 LCG 418
           + G
Sbjct: 418 ILG 420


>gi|256420552|ref|YP_003121205.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256035460|gb|ACU59004.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 427

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 140/427 (32%), Positives = 220/427 (51%), Gaps = 19/427 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG +  I    E      + + +AY+G+D TA SLH G L  ++LL  LQ+ 
Sbjct: 2   NLIEELRWRGMVQDIMPGTE--EQLLKEMTSAYVGFDPTADSLHIGSLVPILLLVHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP +L+GG T ++GDPSF+ E R+M+    +  N   IK     F+ +       A M
Sbjct: 60  GHKPFALVGGATGMVGDPSFKAEERKMLDLDTLAHNQNGIKAQLEKFLDFDPARPNAAEM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   I ++D +R+ G   +VN M+S +SV+ RL+ +  +SF EF Y ++Q YDF 
Sbjct: 120 VNNFDWFKDISFLDFIRDTGKHITVNYMMSKDSVKRRLEGDSGMSFTEFTYQLIQGYDFY 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L    +C+LQMGGSDQWGNI+ G +L  R    + FA T PLL  A G+K GK+  G I
Sbjct: 180 HLYTAKNCKLQMGGSDQWGNIVTGTELIRRKANGEAFAFTCPLLKKADGSKFGKSERGNI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + TSPY F+Q+W    D D  ++ K  T L   EI+ +     ++    + +K +A
Sbjct: 240 WLDPQKTSPYLFYQFWVKTADEDAKNYIKIFTFLGQEEINTLIAAHDQDPGKRQLQKKLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVSRG 349
            E+T  VHG+ E E A  A+   F                      +P ++++  ++  G
Sbjct: 300 EELTVFVHGQTELEFALKASDLLFRNDTAEVLQSLTESQLLEIMDGVPQVAVAAADLEAG 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             +L+ + +     S  EAR+ +++N I IN   +S     +      +   I +  GK 
Sbjct: 360 KDILSFLAETNILPSKGEARKMIQNNGISINKVKVSAIDKMVDKSLLLNDKYILVQRGKN 419

Query: 410 NHIICHL 416
           N+ +  +
Sbjct: 420 NYYLVIV 426


>gi|85708611|ref|ZP_01039677.1| tyrosyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690145|gb|EAQ30148.1| tyrosyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 408

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 193/414 (46%), Positives = 279/414 (67%), Gaps = 8/414 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG +HQI++P  LD L ++ VVT Y+G+D TASSLH G+L  +MLL
Sbjct: 1   MT-YESDLLRLLEERGHLHQITDPGALDQLVTKKVVTGYVGFDPTASSLHIGNLASIMLL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+PI +MGGGT+ +GDPS +DE+R M+  + +  NIE IKG F   + +   K
Sbjct: 60  KRLQQAGHRPIVIMGGGTAKVGDPSGKDETRTMLTEERLASNIEGIKGSFERILDFDDSK 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T AL++NN+ WL  + YI++LR++G  F++NRML+F+SV+ RL REQ LSFLEFNYMI+Q
Sbjct: 120 TGALLINNDDWLSELGYIEMLRDVGPHFTINRMLTFDSVKLRLDREQPLSFLEFNYMIMQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+ LA++YDC+LQ+GGSDQWGNI+ GI+L  R+   +++ +T+PL+T A G KMGK+
Sbjct: 180 AYDFLVLARDYDCQLQLGGSDQWGNIVNGIELNRRIDQREVYGVTAPLITRADGAKMGKS 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GAIWLN++    Y+FWQYWRN DD DV  F +  T + + EI R+ KL+G EIN+AK 
Sbjct: 240 VDGAIWLNEDALPAYDFWQYWRNTDDRDVGKFLRLFTDISLDEIARLEKLEGAEINDAKV 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A  +T MV G   A  A   A   F      + +PT+S+  D    GM +  ++ + G
Sbjct: 300 VLANAVTAMVRGEAAARAAEETANATFAGGGAGEDLPTLSVGGD----GMRIGAILTQIG 355

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R +   A+K++   +S+    I++ D     ++KLS GKK H + 
Sbjct: 356 FTASNGEAKRKIAEGAVKLDGEPVSDPGSLIEIAD---GASVKLSLGKKKHGLL 406


>gi|312891741|ref|ZP_07751249.1| tyrosyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311295772|gb|EFQ72933.1| tyrosyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 427

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 138/427 (32%), Positives = 225/427 (52%), Gaps = 19/427 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H I    E   L ++G+V+ YIG+D T+ SLH G L Q+M L   Q+ 
Sbjct: 2   NFVEELRWRGILHDIMPGTE--ELLNKGMVSGYIGFDPTSDSLHVGSLAQIMTLIHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T ++GDPS +   R ++    +Q+N+  I+     F+ +  G+  A M+
Sbjct: 60  GHKPFALVGGATGMVGDPSGKSAERNLLSEDALQKNLAGIQAQLEKFLDFDCGQNSAEMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W     ++D +R++G   +VN M++ +SV+ RL+ E  +SF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFTFLDFIRDVGKHITVNYMMAKDSVKKRLEGETGMSFTEFSYQLVQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KN +C LQMGGSDQWGNI+ G +   R    + FALT+ L+  A G+K GK+  G IW
Sbjct: 180 LWKNKNCMLQMGGSDQWGNIVTGTEFIRRKSAGEAFALTTQLIKKADGSKFGKSEGGNIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D D  S+ +  T      I+ +         +   +K +A 
Sbjct: 240 LDADKTSPYQFYQFWLNASDEDAKSYIRIFTLFDQQTIEALETEHFAAPHLRVLQKALAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVSRGM 350
           +IT  VHG  E EKA  ++   F  +                   +P  +I++ +   G+
Sbjct: 300 DITIRVHGEHEYEKAIKSSEFLFGNTGIEFLNELSDKEVLALFSGVPNFTIARADFGSGV 359

Query: 351 GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++ L+   +    S  EA++ ++S  + IN   +++           +   +    GKK
Sbjct: 360 NVVDLLAAQSAVFPSKGEAKKMIQSGGVAINKLKVASVDEVYSDAQLINNKFLVAQKGKK 419

Query: 410 NHIICHL 416
           N+ +  +
Sbjct: 420 NYFLIVV 426


>gi|260662606|ref|ZP_05863501.1| tyrosyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553297|gb|EEX26240.1| tyrosyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 417

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 216/420 (51%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  
Sbjct: 2   NIIDELKWRGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS R   R +    ++++N++ +            G  +  ++
Sbjct: 62  GHKPVILIGGGTGAIGDPSGRKTERDLETRSKLEQNVQSLTKQMIRLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQA DF+ 
Sbjct: 118 NNYDWLSKFTMIDFLRDYGKLFNLNTMLNKEVVASRL--DAGISFTEFTYQILQAIDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N DD DVV + K  T L   EI              EA++ +
Sbjct: 236 VWLDPEKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+TT VHG+   ++A   +   F   I       +        S +  +    ++  +
Sbjct: 296 AQEVTTFVHGQAATDQAEKISAILFSGDIQDLTTAEVEQAFAGTPSVEVSAEPANIVDWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  +K+ AI++N   +++ +  +          + +  GKKN+ +  +
Sbjct: 356 VDTKIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGKYVVIRRGKKNYTLAKV 415


>gi|70726193|ref|YP_253107.1| tyrosyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|97202120|sp|Q4L774|SYY_STAHJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68446917|dbj|BAE04501.1| tyrosyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 420

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 229/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++   ++ L ++  ++ Y G D TA SLH GHL   M L   
Sbjct: 1   MSNALIEELQWRGLIYQQTDESSIEELLNKEQISLYCGADPTADSLHIGHLLPFMTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +    +++ N+E I        ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERILQTEDQVEANVEGISAQMHKLFEFGTD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN+ WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA D
Sbjct: 120 ILVNNKDWLSQISLISFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C+LQ+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKLQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           GA+WL+ + TSPY F+Q+W N  D DV+ F K  T L   EI+R+   K Q   + EA+K
Sbjct: 238 GAVWLDADKTSPYEFYQFWINQSDDDVIKFLKYFTFLDKDEINRLEESKNQEPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG+E  + A   +   F                + +P + +S +      
Sbjct: 298 ALAENVTEFIHGKEALDDAIRISKALFSGDLKSLSGKELKEGFKDVPQVELSTETS---- 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ ++++ G ATS  +AR  + + AI IN     +   ++  +D        +  GKK 
Sbjct: 354 NIIDVLIETGIATSKRQAREDVNNGAIYINGERQQSVDYELSNEDKIDDEFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|303245599|ref|ZP_07331882.1| tyrosyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492862|gb|EFL52727.1| tyrosyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 424

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 151/422 (35%), Positives = 223/422 (52%), Gaps = 12/422 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    LS RG +HQ S+   L           Y G+D TA SLH G+L  L+ L    K 
Sbjct: 2   NIFDELSWRGLVHQTSDDAGLREHLETPGRVLYCGFDPTADSLHIGNLVPLLALARFAKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T +IGDPS +D+ R++  ++ I  + EKIK    +F      + +    
Sbjct: 62  GHRPLFLLGGATGLIGDPSGKDKERQLKTAETIAASAEKIKTHALAFFARVGVEGEVTPA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W   +  I+ LR+IG  F++N M++ +SV+SR+ + E  +S+ EF+YMILQ+ DF 
Sbjct: 122 NNLDWTRPMSVIEFLRDIGKHFTINYMMAKDSVKSRIGREETGISYTEFSYMILQSMDFE 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG DQ+GNI  G++L  R      + LT PL+TTASG K GK+  GAI
Sbjct: 182 HLNRTLGCTLQIGGGDQFGNITAGLELIRRKTGNTAYGLTFPLITTASGAKFGKSEKGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           +LN E+TSPY F+QYW N DD DV +F +  T LP  EID   +   +   +  A+K +A
Sbjct: 242 FLNPELTSPYAFYQYWINADDRDVCNFLRYFTFLPKEEIDALAVETAERPHLRAAQKRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SISKDEVSRGMGLLT 354
            E T M+HG EE  K        F         P            ++ + +     L  
Sbjct: 302 RETTAMIHGEEELAKVEAVTEALFGGGELHAVDPGTLKAALEAAPGLNFEALPDVPPLPK 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+   G   S ++AR+ +K+  I +NN  + +E   +  +DF     + L  GKKN+ + 
Sbjct: 362 LLADIGLCPSNSQARKDIKAGGIYLNNERVPSEDRALVAEDFLGGDLLILRKGKKNYGVV 421

Query: 415 HL 416
            L
Sbjct: 422 TL 423


>gi|332881510|ref|ZP_08449159.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332680508|gb|EGJ53456.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 430

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMIHTMMPGTE--DLLEKEQVTAYLGIDPTADSLHIGHLCGVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLDEETLRHNVACIKQQLARFLDFDSDAPNHAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L ++  CRLQ+GGSDQWGNI  G +L  R    ++FAL  PL+T A GTK GKT  G
Sbjct: 180 FLYLYEHKGCRLQLGGSDQWGNITTGAELIRRTNGGEVFALVCPLVTKADGTKFGKTEKG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
            IWLN++ TSPY F+Q+W N+ D D   + +  TTL   EID +     ++      +K 
Sbjct: 240 NIWLNRDYTSPYAFYQFWLNVADDDAKRYIRIFTTLDKEEIDGLIAQHDEDPGQRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH  E+   A  A+   F  +                   +P   +S++ +S
Sbjct: 300 LAKEITIMVHSEEDYNMAVEASNILFGKATKESLTKLDEQTLLDVFAGVPQFEVSREVLS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  +      S  E R+ ++   + +N   ++     +   D  +   + +  
Sbjct: 360 AGIKAVDLTAEMTQCFPSKGEMRKMVQGGGVSLNKEKLTAFDRIVTADDLLNGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|313886844|ref|ZP_07820549.1| tyrosine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923734|gb|EFR34538.1| tyrosine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 436

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 150/434 (34%), Positives = 239/434 (55%), Gaps = 24/434 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E     ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTE--EQLTEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GH+PI+L+GG T +IGDPS + + R ++    ++ N E I      F+ + +     AL
Sbjct: 62  AGHRPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+      LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R++  + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIEGGEAFGVTCPLIKKADGTKFGKTEQ 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +       + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEV 346
            +A ++T MVHGRE+ E++ +A    F  + H                 +P  ++ +  +
Sbjct: 302 TLAEQLTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMSEELLKEVMAGVPNYNVGRTLL 361

Query: 347 S--RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
               G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQADGVKLLDLLVEHAPIFKSKGELRKLIASNGISLNKEKVADQDRVVTTDDLIAGKYLI 421

Query: 404 LSFGKKNHIICHLC 417
           +  GKKN+ +  + 
Sbjct: 422 VQRGKKNYYLITVS 435


>gi|150009644|ref|YP_001304387.1| putative tyrosyl-tRNA synthetase 1 [Parabacteroides distasonis ATCC
           8503]
 gi|255013075|ref|ZP_05285201.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides sp. 2_1_7]
 gi|256838682|ref|ZP_05544192.1| tyrosyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298374041|ref|ZP_06983999.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|189083665|sp|A6LGF1|SYY_PARD8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149938068|gb|ABR44765.1| putative tyrosyl-tRNA synthetase 1 [Parabacteroides distasonis ATCC
           8503]
 gi|256739601|gb|EEU52925.1| tyrosyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298268409|gb|EFI10064.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 430

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 141/428 (32%), Positives = 222/428 (51%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E      + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTE--EQLQKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +     A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ R   +    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKGYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|261379949|ref|ZP_05984522.1| tyrosine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797147|gb|EFC52494.1| tyrosine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 432

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 226/430 (52%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MKSVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+
Sbjct: 61  QAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFD-GDNAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YD
Sbjct: 120 MANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I
Sbjct: 240 AVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTL 355
           +A E+T ++HG E    A   +   F                   +   EVS  + ++  
Sbjct: 300 LAEEMTRLIHGEEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVET 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +VK G A+S  EAR  + S A+ +N                ++   +  +         +
Sbjct: 360 LVKTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAEKPDDAYMLTDEHKRFGKYTIV 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 RRGKRNHALL 429


>gi|220921862|ref|YP_002497163.1| tyrosyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219946468|gb|ACL56860.1| tyrosyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 424

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 219/413 (53%), Positives = 297/413 (71%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +SDFL +L ERG++HQ S+   +D    +G +TAY+GYD TA SLH GHL  +M+L WLQ
Sbjct: 10  RSDFLKVLFERGYVHQCSDFAGVDAAAREGRLTAYVGYDCTAPSLHIGHLLSIMMLHWLQ 69

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
            TG KP++LMGGGT+ +GDPS RDESR+++  ++I  N  +I+  F+ F+++G    DA+
Sbjct: 70  ATGGKPLALMGGGTTRVGDPSGRDESRKILTLEQIDANKAEIRKTFTRFLRFGKDLRDAI 129

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M +N  WL  + YI++LR+IG  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQAYDF
Sbjct: 130 MADNAEWLTQLNYIEMLRDIGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQAYDF 189

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + Y   LQMGGSDQWGNII GIDLG RL TP+L ALT PL+TTASG KMGKT SGA
Sbjct: 190 VELNRRYGVTLQMGGSDQWGNIITGIDLGRRLGTPQLHALTCPLMTTASGAKMGKTASGA 249

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SP+++WQ+WRN +DADV  F +  T LP+ EIDR+A L G EINEAKK++AT
Sbjct: 250 VWLNPDMLSPWDYWQFWRNTEDADVGRFLRLFTLLPLDEIDRLAALGGAEINEAKKVLAT 309

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAGFA 362
           E T ++HGRE AE AA  A   F+     + +PT+ + +  ++ G+G+LT      A   
Sbjct: 310 EATALLHGREAAEAAAETARRTFEEGAAPETLPTVEVPRALLAGGLGVLTAFGPDHAKLL 369

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR ++S  +K+N++ +++E+  +   D  + G IKLSFG+K H++  
Sbjct: 370 PSTSEARRQVRSGGLKVNDAAVTDERAVLGEADLTADGVIKLSFGRKKHVLLR 422


>gi|298373648|ref|ZP_06983637.1| tyrosine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274700|gb|EFI16252.1| tyrosine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 430

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 148/430 (34%), Positives = 225/430 (52%), Gaps = 22/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H I    E   +  +  +TAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDIMPGTE--DILKKECITAYVGIDPTADSLHIGHLCSVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKPI L+GG T +IGDPS + + R ++    ++ N E I+     F+ +       A +
Sbjct: 60  GHKPIVLVGGATGMIGDPSGKSDERNLLDEDTLRHNQEAIRLQLQKFLDFGDDAPNAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+  + ++D  R IG   +VN M+S +SV+ RL  E    +SF EF Y +LQ +D
Sbjct: 120 VNNYDWMKDVTFLDFTRNIGKHITVNYMMSKDSVKRRLNGEFSAGMSFTEFTYQLLQGFD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQMGGSDQWGNI  G +L  R++  + FALT PL+T A GTK GKT +G
Sbjct: 180 FLHLYRTKNCKLQMGGSDQWGNITTGTELIRRIEQSEAFALTCPLITKADGTKFGKTETG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+ E TSPY F+Q+W N  D D   + +  T LP  EI              + ++ 
Sbjct: 240 NIWLSAEYTSPYKFYQFWLNTADEDAERYIRIFTELPHDEIAALVAEHKNAPHERKLQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E  + A  A+   F  +                 + +P  +I K  + 
Sbjct: 300 LAEEVTVMVHSHEALQMAVEASAILFGNATKEMLSRIDEQTLLSLFEGVPRFTIDKGLLQ 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  LTL+ +      S  EAR+ +++N + +N   +++    I L        + +  
Sbjct: 360 SGVQPLTLLAELTNIFPSKGEARKTIQANGLSLNKEKLTDIDRLIGLDSLIGDKYLIVQK 419

Query: 407 GKKNHIICHL 416
           GKKN+    +
Sbjct: 420 GKKNYYCIIV 429


>gi|325129576|gb|EGC52400.1| tyrosyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 431

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 227/428 (53%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|325141639|gb|EGC64101.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 431

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 227/428 (53%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISGSLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|299782728|gb|ADJ40726.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 417

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 217/420 (51%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  
Sbjct: 2   NIIDELRWRGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS R   R +    ++++N++ +            G  +  ++
Sbjct: 62  GHKPVILIGGGTGAIGDPSGRKTERDLETMSKLEQNVQSLTKQMIRLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQA DF+ 
Sbjct: 118 NNYDWLSKFTMIDFLRDYGKLFNLNTMLNKEVVASRL--DAGISFTEFTYQILQAIDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N DD DVV + K  T L   EI              EA++ +
Sbjct: 236 VWLDPEKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+TT VHG+   ++A   +   F  +I       +        S +  +    ++  +
Sbjct: 296 AQEVTTFVHGQAATDQAEKISAILFSGNIQDLTTAEVEQAFAGTPSVEVSAEPANIVDWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  +K+ AI++N   +++ +  +          + +  GKKN+ +  +
Sbjct: 356 VDTKIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGKYVVIRRGKKNYTLAKV 415


>gi|160946158|ref|ZP_02093369.1| hypothetical protein PEPMIC_00120 [Parvimonas micra ATCC 33270]
 gi|158447681|gb|EDP24676.1| hypothetical protein PEPMIC_00120 [Parvimonas micra ATCC 33270]
          Length = 408

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 161/410 (39%), Positives = 251/410 (61%), Gaps = 9/410 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +    L +RG+  Q +   EL  L S+  V  YIG+D TA SL  GH  Q+M++  +Q 
Sbjct: 4   KNIFEELVDRGYFEQATYEDELKELLSKERVKFYIGFDATADSLTIGHFIQIMVMKRMQN 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT++IGDPS R + R +M  ++I  N ++     S FI +  G  +A++
Sbjct: 64  YGHIPIALLGGGTTMIGDPSGRSDMRMVMTEEQINYNAKRFFEQLSRFIDFTDG--NAII 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN+ WL  + +I  ++E+G  FSVN+ML+ ++ ++R+  E+ L+F EF+YM++Q+YDF+
Sbjct: 122 ENNKDWLLDLNFIKFMKEVGVHFSVNKMLTCDAYKNRM--EKGLTFFEFSYMLMQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C+LQ+GGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+
Sbjct: 180 YLYRKHGCKLQLGGSDQWSNILGGYDLVRKLEQDKVYAMTFKLLTTADGVKMGKSQKGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++E TSPY  +QY RN+DD DV  F   LT LP  +   + K + + INEAK+I+A E
Sbjct: 240 WLDEEKTSPYELFQYMRNVDDRDVEKFLLMLTFLPTEKCRELGKYKDERINEAKEILAFE 299

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATS 364
           +T ++HG E+A+KA   A   F   +  ++MP+  I K +     +G+L LI   G + S
Sbjct: 300 VTKIIHGEEKAQKALETARALFSGELLDENMPSTEIKKSDFENEEIGILDLIRTCGLSKS 359

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             EARR ++   I +N   +++  L++      +   I +  GKK +   
Sbjct: 360 NGEARRLIEQGGISLNGEKVADTNLKVS----LNLEEIVIKKGKKIYHRV 405


>gi|326801292|ref|YP_004319111.1| Tyrosyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326552056|gb|ADZ80441.1| Tyrosyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 430

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 140/428 (32%), Positives = 218/428 (50%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E      +GV + YIG+D T  SLH GHLTQ+M L   Q+ 
Sbjct: 2   NFVDELRWRGMLQDIMPGTE--EQLEKGVTSGYIGFDPTGDSLHVGHLTQIMTLIHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTDA 123
           GH+PI+L+GG T +IGDPSF+   R ++  + ++ N+  ++     F+ +         A
Sbjct: 60  GHRPIALVGGATGMIGDPSFKSAERNLLDEETLRHNVSCLEKQLRKFLDFDNQSGKGNGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M+NN  W    K++D +R++G   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YD
Sbjct: 120 IMVNNYDWFKDFKFLDFIRDVGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K+  C +QMGGSDQWGNI+ G +   R      F LT+ L+    GTK GKT SG
Sbjct: 180 FYYLWKHKGCMIQMGGSDQWGNIVTGSEFIRRQDGGSAFGLTTQLIKKTDGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
           A+WL+ + TSPY ++Q+W N  D D  ++ K  T    +EID +         +   +K 
Sbjct: 240 AVWLDAKKTSPYKYYQFWLNASDEDAKNWIKIFTLKDKAEIDSIIAEHDAAPHLRIVQKA 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVS 347
           +A +IT   H     + A   +   F                      +P   I K+E+ 
Sbjct: 300 LAEDITIRTHSVSAYQMAVKTSEFLFGSGSLDFLSGMDDADVLDVFDGVPQSVIRKEELK 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+   A    S  EAR+ ++   + IN   + +    I L +  +   I    
Sbjct: 360 NGINVVDLLSTYASVFPSKGEARKMIQGGGVSINREKVGSVDQTIDLSNLINNKYIIAQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|223043549|ref|ZP_03613594.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443037|gb|EEE49137.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 420

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 228/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MANALIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +   ++++ N++ +        ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEANVQGLSKQMHRLFEFGTD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + F LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + EA+K
Sbjct: 238 GAVWLDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG E    A   +   F                + +P +S+S    S   
Sbjct: 298 ALAENVTKFIHGEEALNDAIRISKALFSGDLKSLTGKELKEGFKDVPQVSLS----SETT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +++ G ATS  +AR  + + AI IN     +   ++   D        +  GKK 
Sbjct: 354 NIIEALIETGIATSKRQAREDVNNGAIYINGERQQSVDYELSNDDKIDNEFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|301307637|ref|ZP_07213594.1| tyrosine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300834311|gb|EFK64924.1| tyrosine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 430

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 141/428 (32%), Positives = 221/428 (51%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E      + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTE--EQLQKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ +       A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSEAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ R   +    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKGYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|291545953|emb|CBL19061.1| tyrosyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 408

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 173/398 (43%), Positives = 250/398 (62%), Gaps = 7/398 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VWEELKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT +IGDPS R + R+M+  + IQ NI+  K   S FI +  G   ALM+N
Sbjct: 63  NRPIALLGGGTGMIGDPSGRTDMRQMLTKETIQHNIDCFKQQMSRFIDFSDG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMNLNYVELLREVGAHFSVNRMLTAECYKQRM--ERGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+DDADV+   + LT LP+ EID MAK +G E+N+AK+I+A ++T
Sbjct: 239 DPNKTSPFDFYQYWRNVDDADVIKCMRLLTFLPLEEIDEMAKWEGSELNKAKEILAYQLT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
            +VHG EEA+KA   A   F     + HMPT  +S+++      + L+TL+VKA    S 
Sbjct: 299 ELVHGEEEAKKAQEGARALFS-GADTSHMPTTELSEEDFDEEGKIDLITLLVKAELVPSR 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +E RR ++   + I+   +++    ++   F   G + 
Sbjct: 358 SEGRRAIQQGGVSIDGEKLTDIYHTVEKDAFAGDGIVL 395


>gi|332299494|ref|YP_004441415.1| Tyrosyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176557|gb|AEE12247.1| Tyrosyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 436

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 150/434 (34%), Positives = 239/434 (55%), Gaps = 24/434 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E     ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTE--EQLTEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GH+PI+L+GG T +IGDPS + + R ++    ++ N E I      F+ + +     AL
Sbjct: 62  AGHRPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+      LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R++  + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIEGGEAFGVTCPLIKKADGTKFGKTEQ 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +       + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEV 346
            +A ++T MVHGRE+ E++ +A    F  + H                 +P  ++ +  +
Sbjct: 302 TLAEQLTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMSEELLKEVMAGVPNYNVGRTLL 361

Query: 347 S--RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
               G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQADGVKLLDLLVEHAPIFKSKGELRKLIASNGISLNKEKVADQDCVVTTDDLIAGKYLI 421

Query: 404 LSFGKKNHIICHLC 417
           +  GKKN+ +  + 
Sbjct: 422 VQRGKKNYYLITVS 435


>gi|258424143|ref|ZP_05687025.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845764|gb|EEV69796.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 420

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 228/424 (53%), Gaps = 15/424 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L
Sbjct: 1   MTNV---LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT  
Sbjct: 58  RRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDH 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQ
Sbjct: 118 -GAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGK 239
           A DF  L +  +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK
Sbjct: 175 AIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + SGA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + E
Sbjct: 235 SESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLRE 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRG-MG 351
           A+K +A E+T  +HG E    A   +   F   + S     +      + +  +S G   
Sbjct: 295 AQKTLAEEVTKFIHGEEALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNGTTN 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ ++++ G + S  +AR  + + AI IN     +   ++   D   +    +  GKK  
Sbjct: 355 IIDVLIETGVSPSKRQAREDVNNGAIYINGERQQDVNYELTSDDKIDSEFTIIRRGKKKC 414

Query: 412 IICH 415
            + +
Sbjct: 415 FMVN 418


>gi|182439471|ref|YP_001827190.1| putative tyrosyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326780134|ref|ZP_08239399.1| Tyrosyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|254783640|sp|B1W1W0|SYY_STRGG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|178467987|dbj|BAG22507.1| putative tyrosyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660467|gb|EGE45313.1| Tyrosyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 423

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 146/421 (34%), Positives = 229/421 (54%), Gaps = 11/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G KP++L+GG T  IGDP      R +   + I   +++++G    F+ +  G   A 
Sbjct: 61  QAGLKPLALVGGATGQIGDPRP-TAERTLNDPETIAAWVQRLRGQIEPFLTFE-GPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  GIDL  RL+    + AL +PL+T A GTK GK+ SG
Sbjct: 179 LELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAVVHALATPLMTKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD DV  + + L+     E+  + K   +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDVSRYLRILSFKSREELAELEKLTEERPQARNAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG E+      A+   F     ++            +    V+    L+ L
Sbjct: 299 LAEELTTLVHGGEQCAAVIAASKALFGQGDLAELDEATLSAALSEVPHATVAELGPLVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G A S + ARR +K     +NN  + + ++     +      + L  GKKN     
Sbjct: 359 LVEVGLAPSKSGARRTVKEGGAYVNNVKVVDGEVAPDAGELLHGRWLVLRRGKKNLAAVE 418

Query: 416 L 416
           +
Sbjct: 419 V 419


>gi|313674441|ref|YP_004052437.1| tyrosyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941139|gb|ADR20329.1| tyrosyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 433

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 130/436 (29%), Positives = 226/436 (51%), Gaps = 25/436 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + +F+  L  RG IH +     ++   ++ + +AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MQKNFIEELQWRGMIHDMMP--GIEKQLAKEMSSAYVGIDPTADSLHIGHLVGVMMLKHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q  GHKPI L+GG T +IGDPS + + R ++    ++ N   IK    +F+ +       
Sbjct: 59  QDAGHKPIILLGGATGMIGDPSGKSQERNLLDEPTLRHNEASIKAQIKNFLDFDAKEDNS 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQ 180
           A ++NN  W+    ++  +R++G   +VN M++ +SV+ R   +  + +SF EF Y ++Q
Sbjct: 119 AELVNNYDWMKDFSFLGFIRDVGKHITVNYMMAKDSVKKRLSSESSEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +C+LQMGGSDQWGNI  G ++  ++   + FA+T PL+  A G+K GKT
Sbjct: 179 GYDFLHLFRKKNCKLQMGGSDQWGNITTGTEMIRKMDQGEAFAVTCPLIKKADGSKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
            +G IWL+ + TSPY F+Q+W N  D D+ +F +  +T   +EI+       +   +   
Sbjct: 239 ETGNIWLDPKKTSPYKFYQFWLNASDEDMSNFIRIFSTKGKAEIEALEKEHNEAPHLRVL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKD 344
           +K +A E+T  VH +E  + A  A+   F  S                 + +P ++I+K 
Sbjct: 299 QKALAEELTVRVHSQEALDMALKASSILFGKSTTEELQSIDEDTLLSVFEGVPQVNITKS 358

Query: 345 EVSRGMGLLTLIVKAG---FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++ +   +   + +        S  EA++ +K   + IN   + +    +++        
Sbjct: 359 DLDKTENVTDFLSELTQGIIFPSKGEAKKMIKGGGVSINKEKVLDANAPVEIS-LLQGKY 417

Query: 402 IKLSFGKKNHIICHLC 417
           I    GKKN+ +  + 
Sbjct: 418 ILAQKGKKNYYLVTVS 433


>gi|325679290|ref|ZP_08158875.1| tyrosine--tRNA ligase [Ruminococcus albus 8]
 gi|324108887|gb|EGC03118.1| tyrosine--tRNA ligase [Ruminococcus albus 8]
          Length = 406

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 179/412 (43%), Positives = 259/412 (62%), Gaps = 13/412 (3%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  RG I Q+++ +E+  + + G    YIG+D TA SLH GH   L L+  LQ  G+K
Sbjct: 5   EELVRRGLIAQVTDEKEISNMINNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNK 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT +IGDPS + + R+M+  + IQ N E  K   S FI +  G   ALM+NN 
Sbjct: 65  PIALVGGGTGMIGDPSGKSDMRKMLTPETIQHNCECFKKQMSRFIDFSDG--KALMVNNG 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL ++ YID+LRE+G+ FSVN+ML+FE  + R+  E+ L+FLEFNYMI+Q+YDF  L +
Sbjct: 123 DWLLNLNYIDVLREVGACFSVNKMLTFECYKQRM--ERGLTFLEFNYMIMQSYDFYRLFQ 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +Y C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL+ 
Sbjct: 181 DYGCNMQFGGDDQWANMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWLDA 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEINEAKKIIATEITT 308
           E TSPY+F+QYWRN+DDADV+   K LT +P+ EI+ M   ++G E N+AK+++A E+T 
Sbjct: 241 EKTSPYDFYQYWRNVDDADVIKCLKLLTFVPIEEIEEMEQHMEGAEYNKAKELLAFELTK 300

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTN 366
           ++HG EEA+KA  AA   F     S  MPT +++KD+V     +G+L L+VKAG A S +
Sbjct: 301 LIHGEEEAKKADAAAKAIFGGGADSADMPTTTLTKDDVDENNCIGILNLLVKAGLAPSNS 360

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           EARR ++ N I +N    ++ K  + + +      + +  GKK      + G
Sbjct: 361 EARRLVQQNGIAVNGEKFTDPKGMVDISE-----QVIIKKGKKIFQKV-VIG 406


>gi|219118843|ref|XP_002180188.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408445|gb|EEC48379.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 488

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 188/417 (45%), Positives = 272/417 (65%), Gaps = 3/417 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             +S+FL  + +RGF+HQ +N R+LD    +G   AY+G+D TA SLH G L Q+M+L  
Sbjct: 70  TLQSEFLQTMRDRGFLHQCTNIRDLDAKLCEGPQAAYLGFDATADSLHVGSLLQIMILRH 129

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKT 121
           LQ++GH+P+ L+GGGTS +GDP+ +DESR ++  + IQ+N + I  +F  F+ +     T
Sbjct: 130 LQRSGHRPVVLIGGGTSKVGDPTGKDESRVLLTDEIIQQNTDGISKVFQQFLTFGDEKPT 189

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M+NN+ WL  IKY+D LR  G+ F++NRMLSFESV+ RL RE   SFLEFNYMILQA
Sbjct: 190 DAIMVNNDEWLSEIKYLDFLRTYGTHFTINRMLSFESVKQRLTREAPFSFLEFNYMILQA 249

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+EL + +   LQ+GGSDQWGN+I G +LG +L++ +LFALT+PL+TT+ G KMGKT 
Sbjct: 250 YDFLELYRRHKTILQLGGSDQWGNMISGTELGRKLESAQLFALTAPLITTSDGKKMGKTA 309

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WLN    S Y++WQ+WRN DDADV+ F K  T LP+ ++  + KLQG EIN+AK +
Sbjct: 310 NGAVWLNAARLSSYDYWQFWRNTDDADVIRFLKLFTELPLDKVAELEKLQGAEINQAKIV 369

Query: 302 IATEITTMVHGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVS-RGMGLLTLIVKA 359
           +A E T ++HG +  E         F      ++ +P +  SK ++   G+  L L+VK 
Sbjct: 370 LADEATALLHGSDSLEAIHKTIETMFAGGGSDTESLPRVYASKTDLETNGVRFLDLLVKL 429

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A S  EARR ++    ++  + I++E   + L DF     + L  GKK   +  +
Sbjct: 430 KLANSKKEARRLIQGGGARLGETPIADENGVLILTDFGGATEVTLRAGKKRAGVVEI 486


>gi|313623573|gb|EFR93749.1| tyrosyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 429

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 156/421 (37%), Positives = 218/421 (51%), Gaps = 13/421 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG I+Q ++   L     +   + Y G D +  S+H GHL   M+L   
Sbjct: 9   MKMNIIDELEWRGAIYQQTDEEGLRKWVEEKQXSLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDFE-GDSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +   +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLL 353
           K +A E+T  VH  E  E+A   +   F   + +     I     +V         + L+
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVNLV 365

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V  G   S  +AR  + + AI IN     N +  I   D        +  GKK + +
Sbjct: 366 DWLVSLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKKYFL 425

Query: 414 C 414
            
Sbjct: 426 V 426


>gi|307244426|ref|ZP_07526537.1| tyrosine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492245|gb|EFM64287.1| tyrosine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 407

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 167/393 (42%), Positives = 237/393 (60%), Gaps = 5/393 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I QI+N  E+  L + G    Y+G+D TA SLH GH   L ++  LQ  G
Sbjct: 3   VFEELQARGLIAQITNEEEIRNLVNTGKAVFYLGFDPTADSLHVGHFMALSMMRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KP+ L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +      A+M+N
Sbjct: 63  NKPVVLVGGGTGYIGDPSGRTDMRTMMTPETIQHNCDCFKVQMSKFIDFSDD--KAIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G  FSVN ML  E  ++R+  E+ LSFLEFNYM++Q+YDF  L
Sbjct: 121 NADWLLKLNYIDMLREVGPHFSVNNMLRAECYKNRM--EKGLSFLEFNYMVMQSYDFYHL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y C +Q+GG+DQW N++ G +L  R       A+T PLLT A GTKMGKT  GA+WL
Sbjct: 179 YKEYGCNIQLGGNDQWSNLLGGTELIRRKLGEDAHAMTIPLLTKADGTKMGKTAGGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+DDADV++F K+LT L + EI  M   +G ++NEAK+++A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVDDADVINFIKKLTFLTLEEIKPMEAWEGAKLNEAKELLAYEMT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VH  E+A+KA  A+   F       +MPT  I   +++ G + +  L+++     S +
Sbjct: 299 RLVHSEEDAKKAQEASKALFAGGADDSNMPTTEIDPAKLTDGAINVTDLMLECDLVPSRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           E RR ++   + I +  + +  L I L D    
Sbjct: 359 EVRRLVQQGGLTIADKKVEDLNLTISLDDLKEG 391


>gi|260577967|ref|ZP_05845892.1| tyrosine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603893|gb|EEW17145.1| tyrosine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 428

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 229/428 (53%), Gaps = 16/428 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K + +  L  RG I+Q ++   L    +Q  +T Y G+D T SSLHAGHL  L++L
Sbjct: 1   MSDNK-NIIDELQWRGLINQSTDLEALKEA-TQNPITLYCGFDPTGSSLHAGHLVPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
              Q+ GH+PI+L GG T +IGDP      R M+  ++I EN+  IK    +F+ +    
Sbjct: 59  KRFQQFGHRPITLAGGATGMIGDPRDVG-ERSMLTEEQIGENMVAIKKQLEAFVDFAEDS 117

Query: 120 --KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
              + A+M+NN  W+  +  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM
Sbjct: 118 DVNSPAVMVNNADWISQMNVIEYLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D+V L   +DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K 
Sbjct: 177 LLQANDYVHLHNEFDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKF 236

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKE 294
           GK+  G  +WL+ ++TSPY+++QY+ N  D  V+ + +  T L   EI  + +   +   
Sbjct: 237 GKSTGGGKLWLDPQLTSPYSWYQYFINAGDTVVIDYLRWFTFLSQEEIAELERKVAEEPY 296

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSR 348
             EA++++A E+TT+VHG    E    AA   F  +       PT+          EV  
Sbjct: 297 KREAQRVLAREMTTLVHGAAATEAVELAAQALFGKAELQDLDEPTLASALQETEVAEVGA 356

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              +L L+V++G   S   ARR +      +NN  I + +      D      + L  GK
Sbjct: 357 DATILDLLVESGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPSADDLLHGSWLVLRKGK 416

Query: 409 KNHIICHL 416
           K      +
Sbjct: 417 KRFAGARV 424


>gi|15674319|ref|NP_268493.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71909895|ref|YP_281445.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94993484|ref|YP_601582.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|81534089|sp|Q9A1U3|SYY_STRP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123080153|sp|Q1J8X3|SYY_STRPF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|13621401|gb|AAK33214.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes M1 GAS]
 gi|71852677|gb|AAZ50700.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94546992|gb|ABF37038.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 418

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 141/418 (33%), Positives = 221/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-------GMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V            ++ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSIDNHNIVEILV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A  + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + +  
Sbjct: 360 AAKISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVLT 417


>gi|281490928|ref|YP_003352908.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281374686|gb|ADA64206.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 419

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 224/422 (53%), Gaps = 18/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L Q++ +  LQ  
Sbjct: 2   NIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVQILTMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M 
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMT 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G  F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRM--ESGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIW
Sbjct: 180 LNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+DDAD V   K  T L + EI  + +     +    A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+ ++VHG+   E+A   +   F      Q             P   ++ DE    + L+
Sbjct: 300 EVVSLVHGKAAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQVTDDE---DLTLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++ AG A S  +AR  + + AI IN   +      I   D        +  GKK + +
Sbjct: 357 ELLISAGIAPSKRQAREDITNGAIYINGERVQALDYVITDSDKIENRLTVIRRGKKKNFV 416

Query: 414 CH 415
             
Sbjct: 417 LT 418


>gi|255527746|ref|ZP_05394600.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187585|ref|ZP_06855979.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508562|gb|EET84948.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296047542|gb|EFG86982.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 407

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 176/407 (43%), Positives = 247/407 (60%), Gaps = 7/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G    YIG+D TA SLHAGH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEDEIKELINNGKGIFYIGFDPTADSLHAGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT  +GDPS R + R MM  + IQ N +  K     FI++G     A+MLN
Sbjct: 63  NKPIVLLGGGTGHVGDPSGRTDLRTMMTPETIQHNCDCFKKQMERFIEFGDD--KAIMLN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI++LRE+G +FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NAEWLLKLNYIEVLREVGVWFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYHL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY C +Q+GG DQW N++ G  L         +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 HKNYGCNMQLGGDDQWSNMLGGTKLIHNKLGEDAYAMTITLLMNSEGKKMGKTASGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ ++D M K +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTSPFEFFQYWRNVADADVLKCIRMLTFLPLEQVDEMDKWEGSKLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  A+   F       +MPT  IS D+++ G + +L L+V  G   S +
Sbjct: 299 KLVHGEEEAEKAKNASHALFAGGTDDSNMPTTEISDDQLNDGAISILDLMVACGLTASKS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           EARR ++   + I++  + +    I L+   +   +K+  GKK +  
Sbjct: 359 EARRVVQQGGVFIDDDKVESIDCNITLEQLKNG--VKIRKGKKTYHK 403


>gi|327388836|gb|EGE87184.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 415

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 152/415 (36%), Positives = 226/415 (54%), Gaps = 17/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKKN
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKN 412


>gi|309378318|emb|CBX23064.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 431

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEAALQAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|296315348|ref|ZP_06865289.1| tyrosine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296837696|gb|EFH21634.1| tyrosine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 431

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 227/428 (53%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAIEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A   +   F            + +    +   EVS G+ ++ ++V
Sbjct: 301 EEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEVLV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|218767580|ref|YP_002342092.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81543095|sp|Q9JVY6|SYY_NEIMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|121051588|emb|CAM07886.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 431

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|313618700|gb|EFR90627.1| tyrosyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 429

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 156/421 (37%), Positives = 218/421 (51%), Gaps = 13/421 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG I+Q ++   L     +   + Y G D +  S+H GHL   M+L   
Sbjct: 9   MKMNIIDELEWRGAIYQQTDEEGLRKWVEEKQXSLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GDSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +   +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLL 353
           K +A E+T  VH  E  E+A   +   F   + +     I     +V         + L+
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDVEVNLV 365

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V  G   S  +AR  + + AI IN     N +  I   D        +  GKK + +
Sbjct: 366 DWLVSLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKKYFL 425

Query: 414 C 414
            
Sbjct: 426 V 426


>gi|314933882|ref|ZP_07841247.1| tyrosine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654032|gb|EFS17789.1| tyrosine--tRNA ligase [Staphylococcus caprae C87]
          Length = 420

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 227/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MANALIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L+GGGT +IGDPS + E R +   ++++ N++ +        ++GT    A
Sbjct: 61  QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEANVQGLSKQMHRLFEFGTD-KGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 VLVNNKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L +  +C++Q+GGSDQWGNI  GI+L  R+    + F LT PL+T + G K GK+ S
Sbjct: 178 FGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSES 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+ +   +   + EA+K
Sbjct: 238 GAVWLDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG E    A   +   F                  +P +S+S    S   
Sbjct: 298 ALAENVTKFIHGEEALNDAIRISKALFSGDLKSLTGKELKEGFIDVPQVSLS----SETT 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +++ G ATS  +AR  + + AI IN     +   ++   D        +  GKK 
Sbjct: 354 NIIEALIETGIATSKRQAREDVNNGAIYINGERQQSVDYELSNDDKIDNEFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|209558661|ref|YP_002285133.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|254783645|sp|B5XJ70|SYY_STRPZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|209539862|gb|ACI60438.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 418

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 141/418 (33%), Positives = 221/418 (52%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKTRGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +       +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-------GMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I +     +      V            ++ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSIDNHNIVEILV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A  + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + +  
Sbjct: 360 AAKISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVLT 417


>gi|16800707|ref|NP_470975.1| tyrosyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526868|sp|Q92BB1|SYY_LISIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16414126|emb|CAC96870.1| tyrosyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 419

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 218/418 (52%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V         + L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVNLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     N +  I   D        +  GKK + + 
Sbjct: 359 VTLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKKYFLV 416


>gi|34498527|ref|NP_902742.1| tyrosine-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81654998|sp|Q7NTI2|SYY_CHRVO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34104383|gb|AAQ60741.1| tyrosine-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 424

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 153/428 (35%), Positives = 229/428 (53%), Gaps = 21/428 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++  L  L  RG I Q ++   L  L ++  VT Y G+D TA SLH G L  +++L
Sbjct: 1   MT--QTALLQDLEARGLIAQTTDMAALQELLNKESVTLYCGFDPTADSLHIGSLVPILML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+P++L+GG T +IGDPSF+   R++     I+  +EKI+     F+ +  G+
Sbjct: 59  KRFQQAGHRPVALVGGATGMIGDPSFKAAERKLNTPDVIEGWVEKIRKQVEPFLSFE-GE 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+M NN  W   +  ++ LR+IG  FSVN M+  ESV+ R  + +Q +S+ EF+Y +L
Sbjct: 118 NAAVMANNYDWFGKMNALEFLRDIGKHFSVNAMIKKESVQQRINRDDQGISYTEFSYSLL 177

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF EL +   C+LQ+GGSDQWGNI  G DL  RL   +++ LT PL+T A GTK GK
Sbjct: 178 QGYDFAELNQRLGCKLQIGGSDQWGNITAGTDLTRRLNQTQVYGLTMPLVTKADGTKFGK 237

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T SG IWL+ + TSPY F+Q+W    DADV  F +  + L + EI     A    +   E
Sbjct: 238 TESGTIWLDAKKTSPYAFYQFWLGTADADVYKFLRYFSFLSVDEIASIEEADKSREGKPE 297

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEV 346
            ++I+A ++T +VHG+   E A       F   +               +PTI + K   
Sbjct: 298 GQRILAEQVTELVHGKAALEAAQRITHSLFSNDLTNLTADDFAQLAQDGLPTIKLDKSAS 357

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
               GL+  +   G A S +EAR  ++S A+ +N   + + +  I   +        L  
Sbjct: 358 ----GLIDALAAGGLAKSKSEARTFIQSGAVSVNGIKVDSLEHAIGDGERLFGQYSLLKR 413

Query: 407 GKKNHIIC 414
           GKK + + 
Sbjct: 414 GKKLYALV 421


>gi|116873028|ref|YP_849809.1| tyrosyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123463834|sp|A0AJ48|SYY_LISW6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116741906|emb|CAK21030.1| tyrosyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 419

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 214/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I  N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISRNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID       +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTETEIDELAKKVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V         + L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVNLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     N +  I   D        +  GKK + + 
Sbjct: 359 VSLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKKYFLV 416


>gi|294811867|ref|ZP_06770510.1| Tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324466|gb|EFG06109.1| Tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 455

 Score =  362 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 135/422 (31%), Positives = 213/422 (50%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q 
Sbjct: 29  TDIVDELQWRGLIAQSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQL 88

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G++P+ L+GG T +IGDP   +  R +   + + E + +++     F+ +      A M
Sbjct: 89  AGNRPLGLVGGATGLIGDPKP-NAERTLNAPETVAEWVGRLRAQIERFLDFEGPY-AARM 146

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  D++
Sbjct: 147 VNNLDWTSGLSAIDFLRDVGKYFRVNKMIAKEAVARRLNSDAGISYTEFSYQILQGMDYL 206

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G DL  R++    + AL +PL+T A GTK GKT SG 
Sbjct: 207 ELYRRHGCTLQTGGSDQWGNLTAGTDLIHRVEPEAGVHALATPLITKADGTKFGKTESGT 266

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKEINEAKKI 301
           +WL+ E TSPY F+Q+W N DD DV  F +  +        E++R  + + +     + +
Sbjct: 267 VWLDAERTSPYAFYQFWLNADDRDVAKFLRIFSFRSRAEIEELERQTEERPQARAAQRAL 326

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTLI 356
                T +    + A     A        +     PT+      + +  V     ++ L 
Sbjct: 327 AQELTTLVHGAEQCAAAEYAAKALFGQGELGELDEPTLRAALGELPRASVEELAPVVDLF 386

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG A S + ARR +K     +NN  ++ E       D      + L  GKKN     +
Sbjct: 387 AEAGLAASKSAARRTVKEGGAYVNNVKVTTEDAVPSPGDLLHGRWLVLRRGKKNLAAIEV 446

Query: 417 CG 418
            G
Sbjct: 447 TG 448


>gi|149181085|ref|ZP_01859585.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851172|gb|EDL65322.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 420

 Score =  362 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 220/420 (52%), Gaps = 14/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG  +Q ++   L  L  +  ++ Y G D TA S+H GHL   + L   Q  
Sbjct: 2   DLLKDLEWRGITYQQTDEEGLKNLLDKEKISIYCGIDPTADSMHIGHLLPFLTLRRFQNQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T +IGDPS + E R++   + IQ N+E IK    S   +  G+T A+M+
Sbjct: 62  GHRPLVLVGGATGLIGDPSGKSEERKLQTVESIQHNVECIKSQLKSIFDFE-GETGAVMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  +  LR+ G    VN ML+ +++ SRL  E  +S+ EF Y ILQA DF  
Sbjct: 121 NNFDWIGPMDMVTFLRDFGKHIGVNYMLAKDTIASRL--ETGISYTEFTYTILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +NY+C+LQ+GGSDQWGNI  G++L  R +    K F  T PL+T A G+K GKT SGA
Sbjct: 179 LYENYNCKLQIGGSDQWGNITTGLELIRRTREEESKAFGFTIPLVTKADGSKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N  DADVV + K  T L   EI+           + +A+K +
Sbjct: 239 IWLDPEKTSPYEFYQFWINTADADVVKYLKYFTFLSHEEIEALAETVETEPHLRKAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTL 355
           A E+T ++HG E   +A       F  +I       I     +V          + L+ L
Sbjct: 299 AEEMTKLIHGEEALAQAIKITEALFSGNIKELSSAEIKQGFKDVPSFTQSTEEEINLVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V    + S  +AR  + + AI IN    ++ +  +   D        +  GKK + +  
Sbjct: 359 LVNTKISPSKRQAREDIGNGAIYINGDRTTDLQHVMSEADRIDGQFTIIRRGKKKYFMIQ 418


>gi|238917062|ref|YP_002930579.1| tyrosyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872422|gb|ACR72132.1| tyrosyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 447

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 170/413 (41%), Positives = 252/413 (61%), Gaps = 7/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K      L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ
Sbjct: 40  KMTLYDELVARGLIAQVTDEALIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQ 99

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G+KPI+L+GGGT++IGDPS R + R+M+  ++IQ N++  K   + FI +      AL
Sbjct: 100 MAGNKPIALIGGGTAMIGDPSGRTDMRKMLTPEQIQHNVDCFKKQMARFIDFSDD--KAL 157

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL ++ Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF
Sbjct: 158 LVNNADWLLNLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDF 215

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C LQ GG+DQW N++ G +L  R       A+T  LL  + G KMGKT SGA
Sbjct: 216 YMLYQKYGCNLQFGGNDQWSNMLGGTELIRRKLDKDASAMTITLLLNSEGKKMGKTASGA 275

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ + TSPY+F+QYWRN+DDADV+   + LT LP+ EID+M   +G ++N+AK+I+A 
Sbjct: 276 VWLDPDKTSPYDFYQYWRNVDDADVLKCIRMLTFLPLEEIDKMDSWEGAQLNKAKEILAY 335

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFAT 363
           E+T +VHG EEA+KA   A   F       +MPT  +  D      +  + L+  AG AT
Sbjct: 336 ELTKLVHGEEEAKKAEATAKAIFTGGDA-ANMPTAKLEADSFTDDEIDAINLVFGAGLAT 394

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +EARR ++   + ++   +++   +     F+  G + +  GKK+ +   +
Sbjct: 395 TKSEARRTIQQGGVSVDGEKVADIAAKFPKSMFEGDG-VVVKKGKKSFVKVSV 446


>gi|297182181|gb|ADI18352.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF4000_04C13]
          Length = 439

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 224/424 (52%), Gaps = 14/424 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +   ++   +    + G +T Y G+D TA SLH GHL  L+LL   Q  G
Sbjct: 16  ILDDLVARGLVQDSTDLEAIRERMADGPITLYCGFDPTADSLHVGHLVPLLLLRRFQDAG 75

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDA 123
           H+PI+L GG T ++GDPS R E R ++  + +  N+E +     SF+++      G   A
Sbjct: 76  HRPIALAGGATGMVGDPSGRSEERNLLDGETLTHNVEAVAVQLRSFLRFDGHLREGDQPA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++++N  W   +  ++ LR++G   +V  ML  ES+R+RL  +Q +SF EF+YM+LQA D
Sbjct: 136 VLVDNREWTEGVGVLEFLRDVGKHVTVGTMLGKESIRARLAGDQGISFTEFSYMLLQAND 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL     C LQ+GGSDQWGNI  GID+  R +      LT PL+T A G K GKT  G
Sbjct: 196 FYELHDRLGCELQVGGSDQWGNITAGIDMIRRRRAVPAHGLTVPLMTRADGAKFGKTADG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+   T PY   QY+ N+DD DV  F   LT LP++E+  +    G+      A+K 
Sbjct: 256 AVWLDAARTLPYELHQYFVNVDDRDVERFLLHLTLLPVAEVASIMADHGRAPESRVAQKR 315

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQH--------MPTISISKDEVSRGMGLL 353
           +A E+  +VHG+ E E+A  AA   F +   +          +P  S++  +++    L+
Sbjct: 316 LADEVCMLVHGQPETERARLAAEGLFGVDPPTGEVLEALRGIVPETSVTAGDLAGEESLV 375

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V AG   S  +ARR L    + +N     ++ + +          + L  G++N  +
Sbjct: 376 DVLVAAGLCGSRGDARRTLAGGGVSVNGVRQDSDAMALPADALVDGRFVLLQKGRRNRHL 435

Query: 414 CHLC 417
             L 
Sbjct: 436 LVLV 439


>gi|94495561|ref|ZP_01302141.1| tyrosyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424949|gb|EAT09970.1| tyrosyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 411

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 210/414 (50%), Positives = 281/414 (67%), Gaps = 11/414 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++ + LD L ++ VV  YIG+D TA SLH G L Q+M+L
Sbjct: 7   MSHYQSDLLRLLDERGYIHQLTDAQGLDALAARDVVPGYIGFDPTAPSLHVGSLVQIMML 66

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GHKPI LMGGGT  IGDPS RDE+R ++   +I EN+  IK +F  F+ +G G 
Sbjct: 67  RRMQQAGHKPIVLMGGGTGKIGDPSLRDEARSLLTVDKINENVASIKRVFERFLTFGDGP 126

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M++N  WL +++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 127 SDAIMVDNADWLDALEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 186

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 187 AYDFLELSRRAGCRLQMGGSDQWGNIVNGIELSRRVDGTQVFGLTSPLITTADGGKMGKT 246

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY++WQ+WRN  DADV  F +  T LP+ EI R+ +L+G EIN+AKK
Sbjct: 247 AKGAVWLNADALSPYDYWQFWRNTQDADVGRFMRLFTDLPLDEIARLERLEGAEINDAKK 306

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T M HG + A  AA  A   F+      ++PTIS+     S G+ ++      G
Sbjct: 307 VLADAATAMAHGADAATAAAETARRTFEEGASDANLPTISLG----SEGLSVVQATTGLG 362

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           FATS  E RR L   AIK+N  ++++  + +K  D       KLSFG K H + 
Sbjct: 363 FATSNKEVRRKLSEGAIKVNGVVVTDPAVLLKAGD-------KLSFGAKKHGLV 409


>gi|262277363|ref|ZP_06055156.1| tyrosyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224466|gb|EEY74925.1| tyrosyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 412

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 191/409 (46%), Positives = 282/409 (68%), Gaps = 2/409 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L+I   RG+  Q +N   L  L  +  +  YIG+D TA SLH G L Q+M L  LQK 
Sbjct: 4   NALNIFKNRGYFFQCTNEGALSKLLGKKKIHFYIGFDCTAKSLHVGSLLQIMCLRQLQKL 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT++IGDPS ++ESR+++    I++N+  IK +FSSF+    G    + +
Sbjct: 64  GHTPVVLLGGGTTLIGDPSGKEESRKILTEDVIEQNVTSIKKVFSSFLS-NEGDNKVVYV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL  + YI+ LR+ G  F++N+ML+F+SV+ RL REQSLSFLEFNYMI QAYDF++
Sbjct: 123 NNKDWLKGLNYIEFLRDYGKHFTINKMLTFDSVKLRLDREQSLSFLEFNYMIFQAYDFMK 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +DC LQ+GGSDQWGNI+ G++L  R K+ + + LT+PL+TT+SG KMGKT  GA+W
Sbjct: 183 LYETHDCLLQIGGSDQWGNIVNGVELIRRSKSKEAYGLTTPLITTSSGAKMGKTEKGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+KE+ S +++WQ+WRN DD DV+++ K  T L   EI++++KL G  INEAK I+A E 
Sbjct: 243 LDKELLSSFDYWQFWRNTDDRDVINYLKLFTELSEEEIEKLSKLDGANINEAKIILANEA 302

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG+EEAEKA   + + FD     +++PT+ I K+E+ +G+ L  +++K GFATS +
Sbjct: 303 TKMLHGKEEAEKALETSKKTFDDKSFDENLPTLEIKKNELEKGISLKEMLIKIGFATSNS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +R+ ++ A KINN  +++E   + + +      IKLSFGKK H +  
Sbjct: 363 DFKRNFQNAAYKINNENVTDENQALTIDNL-DGDTIKLSFGKKKHHLIK 410


>gi|254471831|ref|ZP_05085232.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211959033|gb|EEA94232.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 423

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 193/413 (46%), Positives = 267/413 (64%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+ L +L +RGF+HQ ++   LD     G +TAY G+D TA SLH GHL  LM + WLQ
Sbjct: 15  KSEALQLLIDRGFLHQCTDLEALDEKLQAGPITAYAGFDATADSLHVGHLLPLMAMRWLQ 74

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI L+GGGT+ +GDPSFR ESR ++   +I  N+  I+        +   +    
Sbjct: 75  KTGHKPILLIGGGTTRVGDPSFRSESRPLLDDAQISHNLAGIRATVERL--FDLSEGQGQ 132

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL   ++++ LR+ G+ F+VNRM++F+SVRSRL+ +Q LS LEF YM+LQA DF
Sbjct: 133 IVNNAEWLDEFRFLEFLRDFGTHFTVNRMMTFDSVRSRLEAQQPLSVLEFCYMMLQAVDF 192

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + +DC LQ+GGSDQWGNI+ G+DLG R    +LF  T PLLTTASG+KMGKT  GA
Sbjct: 193 VELNQRFDCTLQIGGSDQWGNIVNGVDLGRR-SGSQLFGFTLPLLTTASGSKMGKTAEGA 251

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN    S + FWQ+WRN+DDADV  F K  T LP+ EIDR++ L+G+E+NEAKKI+AT
Sbjct: 252 VWLNPSRLSSFGFWQFWRNVDDADVPRFLKLFTDLPLGEIDRLSTLKGQELNEAKKILAT 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           ++T +VHG   AE A       F+        PT  +    +++ +GLL L+VK GFAT+
Sbjct: 312 QVTGIVHGLAAAEAALQQGEALFNGQEDLTE-PTHELPLSLLAKPLGLLDLLVKTGFATT 370

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +EARR ++   +++N SI+  E   I   D      + L+ GK+   +    
Sbjct: 371 NSEARRLIRGGGVRLNTSIVLEETRMISEGDLKPGERLTLAVGKRRKALVEFV 423


>gi|313669059|ref|YP_004049343.1| tyrosyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006521|emb|CBN87985.1| putative tyrosyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 431

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 225/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAVEAKDRASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG      A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEAALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLAASNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTEEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|239932103|ref|ZP_04689056.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291440470|ref|ZP_06579860.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343365|gb|EFE70321.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 422

 Score =  362 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 139/423 (32%), Positives = 216/423 (51%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ L  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTLRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A 
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNPPETVAGWVERLRGQIEPFLSFE-GEGAAE 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQNLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C LQ GGSDQWGN+  G+DL  R      + A  +PL+T A GTK GKT SG
Sbjct: 179 LQLYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDATVHAYATPLMTKADGTKFGKTESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N DD D+  + + L+    +   +   + + +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNTDDRDISRYLRILSFRSRAELEELEQQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSRGMGLLTL 355
             E  T +    +   A  AA +          +           +    VS    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASKALFGQGELAGLDERTLAAALSEVPHVRVSELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNAKVTAEDAVPAREDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|225376594|ref|ZP_03753815.1| hypothetical protein ROSEINA2194_02236 [Roseburia inulinivorans DSM
           16841]
 gi|225211477|gb|EEG93831.1| hypothetical protein ROSEINA2194_02236 [Roseburia inulinivorans DSM
           16841]
          Length = 408

 Score =  362 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 174/401 (43%), Positives = 251/401 (62%), Gaps = 6/401 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYDELVARGLIAQVTDEEEIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSEG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYIDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+ D+DV+   + LT LP+ EID M   +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFDFFQYWRNVADSDVLKCIRMLTFLPLEEIDAMESWEGAQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F     S HMPT+ +S  + + G M +L+L+VK   A S +
Sbjct: 299 KLVHGEEEAAKAREASHALFAGGGDSAHMPTVELSSADFADGDMDILSLLVKTELAPSRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +ARR ++   + + +  +++ +       F + G + +  G
Sbjct: 359 DARRAVEQGGVSVADEKVTDIRTAYNADSFGADG-LVVKRG 398


>gi|228469994|ref|ZP_04054910.1| tyrosyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308375|gb|EEK17213.1| tyrosyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 436

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 152/434 (35%), Positives = 239/434 (55%), Gaps = 24/434 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E     ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTE--EQLTEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GHKPI+L+GG T +IGDPS + + R ++    ++ N E I      F+ + +     AL
Sbjct: 62  AGHKPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+      LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R+   + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIDGGEAFGVTCPLIKKADGTKFGKTEK 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +       + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEV 346
            +A E+T MVHGRE+ E++ +A    F  + H                 +P  ++ +  +
Sbjct: 302 TLAEELTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMPEELLEEVMAGVPHYNVGRTLL 361

Query: 347 SR--GMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            +  G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQAGGVKLLDLLVEHAPIFKSKGELRKLIDSNGISLNKEKVADQDCVVTTDDLIAGRYLL 421

Query: 404 LSFGKKNHIICHLC 417
           +  GKKN+ +  + 
Sbjct: 422 VQRGKKNYYLIVVS 435


>gi|255066567|ref|ZP_05318422.1| tyrosine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049151|gb|EET44615.1| tyrosine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 432

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 154/430 (35%), Positives = 226/430 (52%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MKSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+
Sbjct: 61  QAGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFE-GENAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YD
Sbjct: 120 MANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I
Sbjct: 240 AVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T ++HG    + A   +   F            + +    +   EVS  + ++  
Sbjct: 300 LAEEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDDLNVVEA 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +VK G A+S  EAR  + S A+ +N                ++   +            +
Sbjct: 360 LVKTGLASSNKEARGFVNSKAVLLNGQAAESNNPNHAAERPDDAYLLTDAHKRFGKYTIV 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 RRGKRNHALL 429


>gi|324998013|ref|ZP_08119125.1| tyrosyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 426

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 227/428 (53%), Gaps = 12/428 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    +D L  L  RG I Q ++   L   L     +T Y G+D TA SLHAGHL  ++ 
Sbjct: 1   MGGVGTDILDELEWRGLIAQSTDRDALAKELAGDEPITLYAGFDPTAPSLHAGHLVPMLT 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+P+ L GG T +IGDP      R +     + E    I+G    F+ +   
Sbjct: 61  LRRFQEAGHRPVILAGGATGMIGDPRDVG-ERTLNDEATVAEWTGLIRGQLERFVTFDDS 119

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            T AL +NN  W      ++ LR++G  F VN ML+ E+V+ RL  E  +S+ EF+Y++L
Sbjct: 120 PTGALAVNNLDWTGQQTVLEFLRDLGKHFPVNTMLARETVKRRLAGE-GMSYTEFSYLLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+ D++ L +   CRLQ+GGSDQWGNI+ G+DL  R++   + A+T PL+T + G K GK
Sbjct: 179 QSQDYLHLYRELGCRLQIGGSDQWGNIVGGVDLIRRIEGASVHAMTLPLVTDSEGRKFGK 238

Query: 240 TL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEIN 296
           +   G IWL+ + TSPY ++QY+ N+ DADV+ + K LT L   EID           + 
Sbjct: 239 STGGGNIWLDPDRTSPYAWYQYFVNVADADVIGYLKLLTFLDREEIDVLATELTDAPHLR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGM 350
            A++ +ATE+TTMVHG E+  +  TA+   F  +  S+            +   +     
Sbjct: 299 SAQRRLATELTTMVHGEEQTRQVTTASQALFGRADLSELDAGTLAAALAEVPTADTGGSD 358

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L+V  G   S   ARR +K     +NN  +++E+   + +D  + G + +  GK+N
Sbjct: 359 TIVDLLVSTGLTDSRGAARRAVKEGGAYVNNVKVTDEEWVPRAEDALAGGWLVVRRGKRN 418

Query: 411 HIICHLCG 418
                L G
Sbjct: 419 LAGARLAG 426


>gi|300858380|ref|YP_003783363.1| tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685834|gb|ADK28756.1| Tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302206093|gb|ADL10435.1| Putative tyrosyl-tRNA synthetase [Corynebacterium
           pseudotuberculosis C231]
 gi|302330646|gb|ADL20840.1| tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276330|gb|ADO26229.1| Tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 426

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 156/421 (37%), Positives = 231/421 (54%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+  ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q+ 
Sbjct: 6   NIVDELLWRGLINDSTDIDALREAC-EQPITLYCGFDPTGDSLHAGHLVPMVMLRRFQQF 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT-DALM 125
           GH+P++L GG T +IGDP      R M+   ++ +N+E IKG    F+ + +G+  DA+M
Sbjct: 65  GHRPLTLAGGATGMIGDPREVG-ERVMLTEDKVAQNLEAIKGQLRRFVSFESGQNNDAIM 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+ DFV
Sbjct: 124 VNNADWTAGMSVIEFLRDVGKNFSLNTMLDRETVKRRLASD-GISYTEFSYMLLQSNDFV 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA- 244
            L K YDC LQ+GG DQWGNII G+DL  R+   K+ ALT PL+T A G K GK+  G  
Sbjct: 183 HLRKKYDCILQIGGGDQWGNIISGVDLNRRVDGTKVHALTVPLVTDAQGQKFGKSTGGGK 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ E TSPY+++QY+ N  D  V+++ K  T L  SEI  +     +     EA++ +
Sbjct: 243 LWLDPEQTSPYSWYQYFLNAGDTVVINYLKWFTFLTESEIAELEVQVAEAPHKREAQRRL 302

Query: 303 ATEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG    +    AA         E  D       +    +++ E      ++ 
Sbjct: 303 AREMTTLVHGEAATKAVELAAQALFGKASLEDLDEQTLIGAVSETPVAEVEEGEPRTIVD 362

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V AG A S   ARR +K     +NN  IS+E  Q   +D      + L  GKKN    
Sbjct: 363 LLVAAGLADSKGAARRAVKEGGAYVNNVRISDETWQPSEEDLLHGSWVVLRKGKKNFAGV 422

Query: 415 H 415
            
Sbjct: 423 R 423


>gi|116511241|ref|YP_808457.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025595|sp|Q031T7|SYY_LACLS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116106895|gb|ABJ72035.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 419

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 224/422 (53%), Gaps = 18/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  
Sbjct: 2   NIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M 
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMT 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G  F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRM--ESGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIW
Sbjct: 180 LNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+DDAD V   K  T L + EI  + +     +    A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+ ++VHG+E  E+A   +   F      Q             P   I+ DE    + L+
Sbjct: 300 EVVSLVHGKEAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQIAPDE---DLTLI 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++ AG A S  +AR  + + AI IN   +      +   D        +  GKK + +
Sbjct: 357 ELLISAGIAPSKRQAREDITNGAIYINGERVQELDYVLTDSDKIENRLTVIRRGKKKNFV 416

Query: 414 CH 415
             
Sbjct: 417 LT 418


>gi|297180680|gb|ADI16889.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_16J05]
          Length = 427

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 157/423 (37%), Positives = 232/423 (54%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   + + +     RG + QISN  +L +  S+   + Y G+D TA SLH G L  L+ L
Sbjct: 1   MEQIRENLIEEFGWRGLVFQISNKDKLALHLSEAR-SVYCGFDPTADSLHIGSLVPLLAL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG T +IGDPS R + R + +   + + +EK++     F+ +  G 
Sbjct: 60  RRFQLAGHRPILLLGGATGLIGDPSGRADERNLNQHGTVAQWVEKLRTQVGRFLDFD-GA 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMIL 179
             A + NN  W   +  I  LR++G  FSVN M+  +SV++RL + +Q +S+ EF+YM+L
Sbjct: 119 NAATVCNNLDWTQQLDVISFLRDVGKHFSVNAMVQRDSVKARLEREDQGISYTEFSYMLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA DF+ELA+   C LQ+GGSDQWGNII GIDL  R    + FALT PL+T A G+K GK
Sbjct: 179 QAMDFLELARREGCLLQIGGSDQWGNIISGIDLIRRHTGQEAFALTMPLVTKADGSKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           T SGA+WL+   TSPY+F+Q+W N  DAD+  F K  T +  +EI        Q  E   
Sbjct: 239 TASGAVWLDANKTSPYSFYQFWLNSSDADIEKFLKLFTFMSEAEIADLVARSQQALEQRL 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS------IHSQHMPTISISKDEVSRGMG 351
           A++ +A ++T +VHG +    A   +   F            + +    +    VS G G
Sbjct: 299 AQRELARQVTELVHGEDAVTSAERISASLFGGDEASLQREDLKQLQLDGLPSVAVSPGDG 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL  +V  G A S+ EAR+ ++   +++N S + + KL +  +D        L  GKK H
Sbjct: 359 LLNTMVAVGAAKSSGEARKLIQGRGVRLNGSQVEDPKLAVVFEDAYFGEFFLLRKGKKQH 418

Query: 412 IIC 414
            + 
Sbjct: 419 FLL 421


>gi|121634247|ref|YP_974492.1| tyrosyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|189083663|sp|A1KS60|SYY_NEIMF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|120865953|emb|CAM09690.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|308389938|gb|ADO32258.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325131483|gb|EGC54190.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325137529|gb|EGC60111.1| tyrosyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 431

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 227/428 (53%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|313159189|gb|EFR58562.1| tyrosine--tRNA ligase [Alistipes sp. HGB5]
          Length = 432

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 136/430 (31%), Positives = 226/430 (52%), Gaps = 25/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG IH I           + + TAY+G D TA SLH GHL  +M+L   Q 
Sbjct: 4   KNFIEELEWRGMIHTIMPGA--KEQLEKEMTTAYLGIDPTADSLHIGHLVGVMILKHFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GH+P++L+GG T +IGDPS + + R ++    ++ N E IK   +  + + +     A+
Sbjct: 62  CGHRPLALIGGATGMIGDPSGKSQERNLLDEPTLRHNQEAIKRQLAKLLDFESDAPNAAV 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  W+  I +++ +R+IG   +VN M++ +SV+ R       +SF EF Y ++Q +D
Sbjct: 122 LVNNYDWMKDISFLEFIRDIGKCITVNYMMAKDSVKKRFSGEGDGMSFTEFTYQLVQGFD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L +  +C++Q+GG+DQWGNI  G +L  R      + FA+T PL+T A GTK GKT 
Sbjct: 182 FLHLYQTMNCKVQLGGADQWGNITTGTELIRRKLGSEAEAFAITCPLITKADGTKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAK 299
           SG +WL+   TSPY F+Q+W N+ D D   + +  T L    ++ +         +   +
Sbjct: 242 SGNVWLDPRYTSPYKFYQFWLNVSDEDAKRYIRIFTLLDRETVEALTAEHEAAPHLRILQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDE 345
           K +A EITTM+H +EE EKA  A+   F  S                 + +P   I++ E
Sbjct: 302 KRLAQEITTMIHSKEEYEKAVEASAILFGGSTSEALRKLDEETLLQVFEGVPQFRIARAE 361

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G+  + L  + A    S  E R+ ++   + +N   +++   ++   D  +   + +
Sbjct: 362 L--GLPFVDLCAEKAQVFPSKGECRKMVQGGGVSLNKEKVADAAREVTEADLIAGKYLLV 419

Query: 405 SFGKKNHIIC 414
             GKKN+ + 
Sbjct: 420 QKGKKNYFLL 429


>gi|227505064|ref|ZP_03935113.1| tyrosine--tRNA ligase [Corynebacterium striatum ATCC 6940]
 gi|227198352|gb|EEI78400.1| tyrosine--tRNA ligase [Corynebacterium striatum ATCC 6940]
          Length = 419

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 227/422 (53%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q+ 
Sbjct: 2   NIIDELSWRGLINQSTDLEALRDEC-EKPITLYCGFDPTGDSLHAGHLVPMIMLRRFQQF 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI++ GG T  IGDP      R M+  + I++N++ I+     F+ +  G   A+M+
Sbjct: 61  GHRPITVAGGATGTIGDPRDVG-ERSMLSMETIEQNLQAIQKQLRRFVDFE-GDNPAIMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V 
Sbjct: 119 NNADWTMNMSVIEFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K+ ALT PL+T ASG K GK+  G  +
Sbjct: 178 LHREYDCVLQIGGGDQWGNIVFGVDLNRRMDNAKVHALTVPLVTDASGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E TS Y+++QY+ N  D  V+ + +  T L   EI    K   +      A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDTVVIDYLRWFTFLTQEEIAEYEKAVAEEPFKRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG +  +    AA            D    +  +   ++++         + L
Sbjct: 298 QEMTNLVHGEDATKAVELAAQALFGKAELSDLDEKTLAGALAETTVAEIGEGEPRTAVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     INN  + +E  +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAARRTIKEGGAYINNQRVESEDWEPSSEDLLHGAWLVLRRGKKNFAGAR 417

Query: 416 LC 417
           L 
Sbjct: 418 LA 419


>gi|319409842|emb|CBY90151.1| tyrosyl-tRNA synthetase (tyrosine-tRNA ligase; TyrRS) [Neisseria
           meningitidis WUE 2594]
          Length = 431

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|268610300|ref|ZP_06144027.1| tyrosyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 405

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 185/418 (44%), Positives = 265/418 (63%), Gaps = 16/418 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F       L  RG + Q+++ +E++ L + G  T YIG+D TA SLH GH   L L+
Sbjct: 1   MTTF-----EELKRRGLLAQLTDEKEIEELVNAGKATFYIGFDPTADSLHVGHFMALCLM 55

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  G+KPI L+GGGT++IGDPS + + R+MM ++ IQ N++  K   S FI +    
Sbjct: 56  KRLQMAGNKPIVLIGGGTAMIGDPSGKTDMRKMMTAETIQHNVDCFKKQMSRFIDFSED- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  WL  + YI+LLR++G+ FSVNRMLS E  + R+  E+ L+FLEFNYMI+Q
Sbjct: 115 -KAIIVNNADWLMKLNYIELLRDVGAHFSVNRMLSHECYKQRM--ERGLTFLEFNYMIMQ 171

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF+EL + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT
Sbjct: 172 SYDFLELFQKYGCNMQFGGDDQWANMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKT 231

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAK 299
             GA+WL+ E T+PY F+QYWRN+ DADV+   K LT +P+ +I+ M K ++G E N+AK
Sbjct: 232 EKGAVWLDPEKTTPYEFFQYWRNVADADVIKCLKMLTFVPVEQIEEMEKTMEGAEYNKAK 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVK 358
           +++A E+T +VHG EEAEKA  AA   F  S  +++MPT+ I   E++ G +GLLTL+VK
Sbjct: 292 ELLAYELTKLVHGEEEAEKAKAAAKALFGGSGSNENMPTVEIDSAELTDGALGLLTLLVK 351

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A  A S +EARR ++   I +N+    + K QIKL+     G   +  GKK      +
Sbjct: 352 AELAPSISEARRLVQQGGITVNDEKKIDPKEQIKLE-----GETIVRKGKKAFKKVIV 404


>gi|261401574|ref|ZP_05987699.1| tyrosine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208346|gb|EEZ74801.1| tyrosine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 431

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 154/428 (35%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAVEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + + A+ +N                ++   +  +         +  
Sbjct: 361 KTGLASSNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDACLLTEEHKRFGKYTIIRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|222151653|ref|YP_002560809.1| tyrosyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254783616|sp|B9E7E5|SYY_MACCJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222120778|dbj|BAH18113.1| tyrosyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 417

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 142/418 (33%), Positives = 218/418 (52%), Gaps = 10/418 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  L  RG I+Q ++P E++ L ++  V+ Y G D TA SLH GHL   M L   
Sbjct: 1   MTSALLEDLRWRGLIYQETHPEEMEALLNKESVSVYCGTDPTADSLHIGHLLPFMTLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+P+ L+GG T +IGDPS R + R +    ++Q N++ I         +G  +  A
Sbjct: 61  QAHGHRPVVLIGGATGMIGDPSGRTDERTLQTLAQVQHNVDGISKQMEQLFDFG-TENGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           + ++N+ WL  I  +  LR+ G    VN +L+ +S+ SRL  E  +SF EF Y ILQA D
Sbjct: 120 IRVDNKDWLGKIDLLTFLRDYGKHVGVNYLLNKDSIASRL--ETGISFTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLS 242
           F  L K  + +LQ+GGSDQWGNI  G++L  R+    + + +T PL+  + G K GK+  
Sbjct: 178 FGHLNKTLNVKLQIGGSDQWGNITSGMELMRRMYGEVEAYGMTVPLVVKSDGKKFGKSEG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL++  T+PY F+Q+W N  D+DV+ F K  T L   EID    +      +  A+K
Sbjct: 238 GAVWLDRTKTTPYEFYQFWINTPDSDVIKFLKYFTFLSKEEIDALETSVENEPHLRLAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR----GMGLLTLI 356
            +A E+T  VH     E+A       F   + +     +  S  +V +       L+ L+
Sbjct: 298 RLAEEVTKYVHDESALEEAVNITDALFKGDLKALTADQLRTSFKDVPQAKVTTTNLVELL 357

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++AG + S  +AR  + + AI IN   + +   +I   D        +  GKK + + 
Sbjct: 358 IEAGISPSKRQAREDITNGAISINGEKVQDVAYEIVATDKIEDEFTIIRRGKKKYFMI 415


>gi|149196813|ref|ZP_01873866.1| tyrosyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139923|gb|EDM28323.1| tyrosyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 424

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 236/421 (56%), Gaps = 14/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I Q S   EL    S   ++ Y G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 4   NIYDELKWRGLIFQESGQDELRSYLSDEKISVYCGFDPTADSLHIGHLVPLITLRRFQEY 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  + L GG T +IGDPS + + R ++ S +I  N+E IK      I +      A ++
Sbjct: 64  GHSVLPLAGGATGMIGDPSGKSQERNLLSSDDIAHNVESIKSQLKQIIDFSGDS--ATLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  I+ LR+IG  FSVN M++ +SV SRL+ +E  LS+ EF+YM+LQ YDF+
Sbjct: 122 NNFDWISKINIIEYLRDIGKNFSVNVMMNRDSVSSRLEGKEAGLSYTEFSYMVLQGYDFL 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + ++C LQ+GGSDQWGN+  G+DL  R    + F +T PL+  + GTK GKT  G++
Sbjct: 182 HLNREHNCTLQIGGSDQWGNMTSGMDLIRRSNGKRSFCMTVPLIMKSDGTKFGKTAGGSV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ + T PY+F+QYW N+ DADV+ F K  T LP   ++  + +  Q   + EA+K +A
Sbjct: 242 WLDPKQTCPYDFYQYWFNVADADVIRFIKFFTFLPQDVVEALQASVEQEPHLREAQKKLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ---------HMPTISISKDEVSRGMGLLT 354
            E+TTM+HG EEA+KA  AA   F      +         H  T + S   +    G+L+
Sbjct: 302 WEMTTMIHGEEEAKKAIFAAAALFGREDIREVDAITMDALHNATEAPSFSSLDEVEGILS 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  +G   S+ EAR+ ++ N I +NN  + + + +   +D      + L  GKK+  + 
Sbjct: 362 LLTASGLCKSSGEARKMVQGNGISLNNEKVKDFRYKPVQEDLIHQTYLVLRKGKKDFSVI 421

Query: 415 H 415
            
Sbjct: 422 K 422


>gi|330997189|ref|ZP_08321042.1| tyrosine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570984|gb|EGG52691.1| tyrosine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 430

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMIHTMMPGTE--DLLEKEQVTAYLGIDPTADSLHIGHLCGVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLDEETLRHNVACIKQQLARFLDFDSDAPNHAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+   K++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFKFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L ++  CRLQ+GGSDQWGNI  G +L  R    ++FAL  PL+T A GTK GKT  G
Sbjct: 180 FLYLYEHKGCRLQLGGSDQWGNITTGAELIRRTNGGEVFALVCPLVTKADGTKFGKTEKG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
            IWLN++ TSPY F+Q+W N+ D D   + +  TTL   EID +     ++      +K 
Sbjct: 240 NIWLNRDYTSPYAFYQFWLNVADDDAKRYIRIFTTLDKEEIDGLIAQHDEDPGQRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH  E+   A  A+   F  +                   +P   +S++ +S
Sbjct: 300 LAKEITIMVHSEEDYNMAVEASNILFGKATKESLTKLDEQTLLDVFAGVPQFEVSREALS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  +      S  E R+ ++   + +N   ++     +   D  +   + +  
Sbjct: 360 AGVKAVDLTAEMTQCFPSKGEMRKMVQGGGVSLNKEKLTAFDRMVTTDDLLNGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|300744032|ref|ZP_07073052.1| tyrosine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380393|gb|EFJ76956.1| tyrosine--tRNA ligase [Rothia dentocariosa M567]
          Length = 434

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 221/424 (52%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++   L+   S   +T Y GYD TA+SLH GHL QL+++  LQ  
Sbjct: 17  NIWQELKWRGLVHVSTDEEALEKALSDEKLTFYTGYDPTAASLHLGHLVQLLVMRRLQLA 76

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T +IGDP  +   R +   + + + ++ ++     F+ +  G+  A M+
Sbjct: 77  GHYPLGLVGGFTGLIGDPR-QTSERVLNSREVVADWVQSLRSQIERFLSFE-GENAARMV 134

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR+IG  F V  M+  E V  RL  E+ +S+ EF+Y ILQ  D++E
Sbjct: 135 NNLDWGGQLSAIDFLRDIGKHFRVGTMVKKEIVAKRLNSEEGISYTEFSYQILQGLDYLE 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIW
Sbjct: 195 LNRQYGCTLQTGGSDQWGNLTSGTELIRKVEGKTVHAIGTPLITNSDGTKFGKSEGNAIW 254

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           LN EM SPY F+Q+W N  DADV+   K  T L  +EI              EA+K++A 
Sbjct: 255 LNPEMCSPYAFYQFWLNTADADVIDRLKVFTFLTRAEIGEYEHKVETEAYKREAQKLLAY 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGLL 353
           E+T +VHG E  E+A  A+   F                   +P++ +S D +     L+
Sbjct: 315 EVTALVHGVEPTEQAIAASEALFGKGDFASLDESTLQAVMDELPSVELSSDRLD----LI 370

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           T + + GFA+S +EARR LK     +N   +  E   I  +         +  GKKN   
Sbjct: 371 TALTELGFASSKSEARRILKEGGASVNGVKVQGEDALISSEQLLHGKYAIVRRGKKNQGA 430

Query: 414 CHLC 417
             + 
Sbjct: 431 ITVV 434


>gi|15672367|ref|NP_266541.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81538453|sp|Q9CIH5|SYY_LACLA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|12723257|gb|AAK04483.1|AE006275_7 tyrosyl-tRNA synthetase 1 [Lactococcus lactis subsp. lactis Il1403]
 gi|326405961|gb|ADZ63032.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 419

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 143/422 (33%), Positives = 223/422 (52%), Gaps = 18/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  
Sbjct: 2   NIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M 
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMT 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G  F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRM--ESGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIW
Sbjct: 180 LNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+DDAD V   K  T L + EI  + +     +    A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+ ++VHG+   E+A   +   F      Q             P   ++ DE    + L+
Sbjct: 300 EVVSLVHGKAAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQVTDDE---DLTLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++ AG A S  +AR  + + AI IN   +      I   D        +  GKK + +
Sbjct: 357 ELLISAGIAPSKRQAREDITNGAIYINGERVQALDYVITDSDKIENRLTVIRRGKKKNFV 416

Query: 414 CH 415
             
Sbjct: 417 LT 418


>gi|313204305|ref|YP_004042962.1| tyrosyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443621|gb|ADQ79977.1| tyrosyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 430

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 143/428 (33%), Positives = 229/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +    E     ++ V +AYIG+D TA SLH G L  ++LL   Q  
Sbjct: 2   NFIEDLEWRGVIHTMMPGTE--EQLAKEVTSAYIGFDPTADSLHIGSLAPILLLKRFQLA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-GKTDALM 125
           GHKPI+L+GG T +IGDPS + + R ++  + +++N+  I+   + F+ + T     A M
Sbjct: 60  GHKPIALVGGATGMIGDPSGKSQERNLLNEETLEKNLAGIRKQLAKFLDFETESPNKAEM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  +    +SF EF Y ++Q YD
Sbjct: 120 VNNYDWMKEQTFLSFIRDIGKHITVNYMMAKDSVKKRLTGETRDGMSFTEFTYQLVQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L +N +C+LQMGGSDQWGNI  G +L  R  + + +ALT  L+T A G K GKT SG
Sbjct: 180 FYWLYENMNCKLQMGGSDQWGNITTGTELIRRKASGEAYALTINLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
            +WL+ E T+PY F+Q+W N  D D   + +  T +   EI+ + +   +   + E +K 
Sbjct: 240 NVWLDPEKTTPYAFYQFWLNTADVDAEKYIRVFTFMSKEEIEELIERHRQAPHLRELQKK 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A +IT MVH  E+   A  A+   F  +                   +P   ISK E+ 
Sbjct: 300 LAHDITIMVHSEEDYNAAVEASNILFGNATSDALKKLDENTLLAVFDGVPQFKISKKELE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+ + A    S  E R+ ++S  + IN   + N+   +      +   + +  
Sbjct: 360 EGVKVIDLLTEKAAIFPSKGEMRKLVQSGGVSINKEKLDNQDEVLDGSKLLNNKYLLIQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|255535883|ref|YP_003096254.1| Tyrosyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342079|gb|ACU08192.1| Tyrosyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 452

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 151/433 (34%), Positives = 227/433 (52%), Gaps = 26/433 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            + F+  L  RG    +      D   ++   TAYIG+D TA SLH G L Q+ +L   Q
Sbjct: 22  MNPFIEELKWRGLYADMMPGT--DEQLNKETTTAYIGFDPTADSLHIGSLIQIKILAHFQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKPI+L+GG T +IGDPS +   R  +  + +   +  +K   S F+K+  T    A
Sbjct: 80  QHGHKPIALVGGATGMIGDPSGKSTERNALDEETLNHYVSCLKSQLSKFLKFDGTESNSA 139

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
            ++NN  W+    +++ +R+IG   +VN M++ ESV+ R+  E   + +SF EF Y +LQ
Sbjct: 140 ELVNNYDWMKEFSFLEFIRDIGKNITVNYMMAKESVKKRITGEGGAEGMSFTEFTYQLLQ 199

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  + +LQMGGSDQWGNI  G +L  R    + FALT PL+T + G+K GK+
Sbjct: 200 GYDFLHLYREKNVKLQMGGSDQWGNITTGTELIRRKAQGEAFALTVPLITKSDGSKFGKS 259

Query: 241 LS-GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
            S    WL+ + TS Y F+Q+W N  D D   F K  T L   EI+ +           +
Sbjct: 260 ESGENYWLDPKKTSAYKFYQFWVNATDEDAERFIKFYTFLSKEEIETLIAEHKTAPHERK 319

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            +K +A E+T  VH + E EKA  A+   F  S                 + +P   ++K
Sbjct: 320 LQKKLAEEVTVWVHNQAEYEKAVKASEILFGRSTAEDLVNLDEATFLEVFEGVPQKELTK 379

Query: 344 DEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           DEV  G  ++ LI +  GF  S  EARR L+SNAI +N   +++   ++  +D      +
Sbjct: 380 DEVLAG-NIIDLISEKTGFLKSKGEARRELQSNAISVNKEKVTD-SFEVAAKDLIDGKFL 437

Query: 403 KLSFGKKNHIICH 415
            +  GKKN+ I  
Sbjct: 438 LIQKGKKNYFIVK 450


>gi|149275976|ref|ZP_01882121.1| tyrosyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149233404|gb|EDM38778.1| tyrosyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 428

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/427 (32%), Positives = 223/427 (52%), Gaps = 19/427 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++F+  L  RG +  +    E     ++G+ + YIG+D TA SLH GHLTQ+M L   Q
Sbjct: 1   MTNFVEELRWRGMLQDMMPGTE--EKLNEGMTSGYIGFDPTADSLHVGHLTQIMTLIHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP +L+GG T ++GDPS + + R +   + +  N+  +K   S F+ + + +  A+
Sbjct: 59  RAGHKPYALVGGATGMVGDPSGKSDERNLQTEEMVAHNLAGMKRQLSKFLTFNSEENGAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +     +R++G   +VN M++ +SV+ RL+ +  LSF EF Y ++Q YDF
Sbjct: 119 MVNNADWFKDMSLFTFIRDVGKHITVNYMMAKDSVKRRLEGDSGLSFTEFCYQLIQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN +C +QMGGSDQWGNI+ G +L  R      FA+T+ L+  A GTK GKT SGA
Sbjct: 179 YYLWKNNNCLVQMGGSDQWGNIVTGTELIRRKDAGTAFAITTQLIKKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WL+ E TSPY F+Q+W N  D D   + +  T     EI+ + +       +   +K +
Sbjct: 239 VWLDPEKTSPYKFYQFWLNASDDDTKKWIRIFTLKTQEEIEILEQQHNEAPHLRILQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVSR 348
           A +IT   H  E  E A   +   F                    + +P   I+K+E++ 
Sbjct: 299 AEDITVRTHSAEALETAIKTSEFLFGNGSLEFFNTLTEAQVLEIFEGIPQYLIAKEELTA 358

Query: 349 GMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           G+   T++ +      S  EA++ ++   + +N   I      + + D  +   + +  G
Sbjct: 359 GIDAATILAEKTSVFPSKGEAKKTIQGGGVSLNKEKIKEASQLVSVADLLNDQFLIVQKG 418

Query: 408 KKNHIIC 414
           KKN+ + 
Sbjct: 419 KKNYFLL 425


>gi|223937057|ref|ZP_03628965.1| tyrosyl-tRNA synthetase [bacterium Ellin514]
 gi|223894338|gb|EEF60791.1| tyrosyl-tRNA synthetase [bacterium Ellin514]
          Length = 426

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 145/423 (34%), Positives = 229/423 (54%), Gaps = 14/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +   ++  EL    + G +T Y G+D T  SLH G+L  L+ L   Q  
Sbjct: 2   NIYEELEWRGLLADCTDKVELLKRLAAGPITLYAGFDPTGDSLHVGNLVPLLALRRFQLF 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDPS +   R+++  + +  NI  IK      + +      A +L
Sbjct: 62  GHIPIALAGGATGSIGDPSGKTVERQLLTKEVLDTNIASIKVQLRRLLDFDAAANPARLL 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           +N TW   + Y+D LRE+G  FSVN M++ ESVR+R++  +  +S+ EF+YM+LQA+DF 
Sbjct: 122 DNNTWTAPVSYLDFLREVGKHFSVNMMVAKESVRARMEDRETGISYTEFSYMLLQAFDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K ++C LQ+GGSDQWGNI  G DL  +  +  +F LT PL+T A G+K GK+++GAI
Sbjct: 182 HLRKEFNCELQIGGSDQWGNITAGSDLCRKKLSAHVFGLTLPLITNADGSKFGKSVAGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ + TS Y F+Q+W N DD DV+ + K  T L   EI  + +          A K +A
Sbjct: 242 WVDAKKTSVYRFYQFWINTDDRDVIRYLKFFTFLTQDEITALEQQHTANPGARVAHKALA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS-RGMGL 352
             +T ++HG +   +A  A+   F            +     +PT  + K ++   G+ L
Sbjct: 302 KAMTDLIHGEQATTEAIRASEILFGGELSGISESTFNDIVGEVPTKDLEKSKLEGAGIPL 361

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S  +AR+ ++   + +NN   +N +  +   D     ++ L  GKKN+ 
Sbjct: 362 VELLVHSGLSPSKGQARKDIEGGGVNLNNVREANFQRPVTTSDLLFGKHLLLRKGKKNYT 421

Query: 413 ICH 415
           +  
Sbjct: 422 VLT 424


>gi|29833001|ref|NP_827635.1| tyrosyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81716787|sp|Q829F2|SYY_STRAW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29610122|dbj|BAC74170.1| putative tyrosyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 422

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 135/423 (31%), Positives = 215/423 (50%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG +   ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q
Sbjct: 1   MTDIVDELKWRGLVALSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G++P+ L+GG T +IGDP   +  R +   + + E +E+++   +  + +  G   A+
Sbjct: 61  QAGNRPLGLVGGATGLIGDPKP-NSERTLNSREVVAEWVERLRAQIAPLLDFE-GPNAAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTQGLSAIEFLRDVGKYFRVNKMIAKEAVSRRLNSDAGISYTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN+  G DL  R +    + AL +PL+T A GTK GKT SG
Sbjct: 179 LELYRRYGCTLQTGGSDQWGNLTSGTDLIHRAEPDAVVHALGTPLITKADGTKFGKTESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKII 302
            IWL+ EMT+PY F+Q+W N DD DV  F +  +     EI+ + K  + +    A +  
Sbjct: 239 TIWLDPEMTTPYAFYQFWLNADDRDVSKFLRIFSFKSHEEIEELEKQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVSRGMGLLTL 355
             E  T +    +   A  AA +          +           +   +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASKALFGQGELTELDEATLAAALSELPHVKVAEPAPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             +     S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVALVASKSAARRTIKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|295112152|emb|CBL28902.1| tyrosyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 427

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 149/426 (34%), Positives = 238/426 (55%), Gaps = 12/426 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +   +L  RG+    ++   L  +    +VTAY+G+D TA SLH GHL  LM L WL
Sbjct: 1   MSCNAFDVLKARGYFEWCTSEDRLREVMQSEMVTAYVGFDPTADSLHVGHLIPLMALGWL 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI+L GGGT +IGDPS + + R ++  + +Q N+E ++   + F+ +  GK  A
Sbjct: 61  QRAGHRPIALAGGGTGLIGDPSGKSKERNLITLEAVQRNVEGVRKQLAHFLDFDCGKNSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAY 182
           L+LNN  WL  + ++D+L ++G +FSVN +++ E ++SRL+  +  +S+ EF+Y++LQA 
Sbjct: 121 LLLNNYDWLSRMTFLDVLHDVGKYFSVNNLIAREYIKSRLEDPEKGISYTEFSYVLLQAI 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L  +Y C+LQMGG+DQ GN++ G +   +    ++F LT PLL TASGTK GKT +
Sbjct: 181 DFKHLHDHYGCKLQMGGNDQQGNLLAGTEYIRKTSGGEVFGLTQPLLLTASGTKFGKTEA 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N DD DV    K  T LP+ ++  + +      E   A++
Sbjct: 241 GAVWLDAERTSPYQFYQFWVNADDRDVERLLKLYTFLPLEDVRLLMEEHAAHPERRVAQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP---------TISISKDEVSRGMG 351
            +ATE+T  VHG   AE  A  +   FD  +    +              S+ ++S   G
Sbjct: 301 RLATEVTQRVHGAAAAESVAKVSAVLFDPDVDLSGLSEETCLALKREAPCSEAKLSMPAG 360

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +L ++       S  EA+R ++   + IN   +++E   I          + +  G+K  
Sbjct: 361 VLDVLTACSACASRGEAKRAVRQGGVSINGVRVADEGASIDADQLRYGRYLFVRVGRKKF 420

Query: 412 IICHLC 417
            +  + 
Sbjct: 421 YVLSVV 426


>gi|328881503|emb|CCA54742.1| Tyrosyl-tRNA synthetase cluster 1 [Streptomyces venezuelae ATCC
           10712]
          Length = 422

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 136/423 (32%), Positives = 218/423 (51%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +   + +   + +++     F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNDPETVANWVNRLRSQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ EQ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESEQGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN++ G+DL  R     ++ AL +PL+  A GTK GKT  G
Sbjct: 179 LELYRRYGCTLQQGGSDQWGNLVAGLDLIHRLEPGAEVHALATPLMVKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-GKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ +      +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKSREELEELEAQTAERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVSRGMGLLTL 355
             E  T +    +   A   A +          +           +    V+    ++ L
Sbjct: 299 LAEELTTLVHGADQCAAVINASKALFGQGELTELDEATLAAALSELPHARVTELGQVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G A S + ARR +K     +NN  ++ E  ++  ++      + L  GKKN     
Sbjct: 359 FTEVGLAPSKSGARRTVKEGGAYVNNVKVTAEDAEVSAEELLHGRWLVLRRGKKNLAAIE 418

Query: 416 LCG 418
             G
Sbjct: 419 FAG 421


>gi|254671610|emb|CBA09297.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha153]
 gi|325127584|gb|EGC50507.1| tyrosyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 431

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|59712334|ref|YP_205110.1| tyrosyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197335989|ref|YP_002156549.1| tyrosyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|75353688|sp|Q5E424|SYY_VIBF1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765187|sp|B5FFR9|SYY_VIBFM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|59480435|gb|AAW86222.1| tyrosyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197317479|gb|ACH66926.1| tyrosyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 426

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 229/423 (54%), Gaps = 19/423 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++ L  L  RG I Q +   EL    S    T Y G+D TA SLH G L  L++L
Sbjct: 1   MTA-TNELLQDLKARGLIAQCTADEELAEHLSTDCRTLYCGFDPTADSLHIGSLVPLLVL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP++L+GG T +IGDPSF+   R++  ++ + + + KIK   S+F+ +   K
Sbjct: 60  KRFQQAGHKPLALVGGATGLIGDPSFKAAERQLNTNEVVGDWVNKIKAQVSAFVDFTEEK 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+  I  I+ +R++G  FSVN M+  ESV+ R+ RE   +SF EF+YM+L
Sbjct: 120 NGAEVVNNLDWIGQINVIEFMRDVGKHFSVNAMIQKESVKQRIDREGSGISFTEFSYMLL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF  L K  +C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GK
Sbjct: 180 QSYDFAALNKAKECTLQIGGSDQWGNITGGIDLTRRMNRNKVFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T SG IWL+   TSPY F+Q+W    DADV +F +  T L + EI     +    +   E
Sbjct: 240 TESGTIWLDSNKTSPYAFYQFWLGTADADVYNFLRFFTFLTVEEIAAVEESDKSVQGRPE 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            + I+A E+T +VHG E    A       F   + S             +P+  +   E 
Sbjct: 300 GQGILAREVTRLVHGEEGLASAERITKALFSGDLSSLTETDLAQLALDGLPSTELEASE- 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                ++ ++ ++  A S   AR  + + A+ +N   +++ +  +K +D        +  
Sbjct: 359 ---QTIVEVLTQSELAKSNKMAREFIGNGAVSVNGEKVADTEAVLKKEDALFGKYSVIKR 415

Query: 407 GKK 409
           GKK
Sbjct: 416 GKK 418


>gi|325285904|ref|YP_004261694.1| Tyrosyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321358|gb|ADY28823.1| Tyrosyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 431

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 150/433 (34%), Positives = 230/433 (53%), Gaps = 23/433 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S+F++ L  RG IH +    E      + +  AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MASNFVAELKWRGMIHDVMPETE--EHLLEQMRAAYVGIDPTADSLHIGHLVSVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q  GHKP +L+GG T +IGDPS +   R ++  + ++ N   IK   S F+ + +  +  
Sbjct: 59  QLAGHKPYALIGGATGMIGDPSGKSAERNLLDEKTLRHNQNAIKDQLSRFLDFKSDEENA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQ 180
           A+++NN  W+    +++ +R++G   +VN M++ +SV+ R   + ++ +SF EF Y ++Q
Sbjct: 119 AVLVNNYDWMKEFSFLEFIRDVGKHITVNYMMAKDSVKKRLTSEAKEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L K ++C LQMGGSDQWGNI  G ++  R+   K +ALT PL+T A GTK GKT
Sbjct: 179 GYDFFHLFKEHNCTLQMGGSDQWGNITTGTEMIRRIGGGKGYALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G IWL+ E TSPY F+QYW N  D D   F K  T L   EID       +   +   
Sbjct: 239 EGGNIWLDAERTSPYKFYQYWLNTSDEDAEKFIKIFTFLTKEEIDALIAEHKEAPHMRAL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +K +A EIT  VH +++ + A  A+   F  S                 + +P   ++K 
Sbjct: 299 QKKLAEEITISVHSKQDLDNAIKASNILFGKSTSDDLKTLDEKTFLDIFEGVPQAEVTKT 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++  +  K  F  S   ARR LK N+I +N   +  E   I  +D  +   + 
Sbjct: 359 DIEEGLDMIGALAAKTQFLDSNGAARRELKQNSISVNKEKVK-EDYVITSKDLINNKFVL 417

Query: 404 LSFGKKNHIICHL 416
           L  GKKN+ +  +
Sbjct: 418 LQRGKKNYFVLVV 430


>gi|160941404|ref|ZP_02088741.1| hypothetical protein CLOBOL_06297 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435965|gb|EDP13732.1| hypothetical protein CLOBOL_06297 [Clostridium bolteae ATCC
           BAA-613]
          Length = 408

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 160/403 (39%), Positives = 237/403 (58%), Gaps = 6/403 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELEARGLIAQVTDEAEIRELVNAGKAKFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++P+ L+GGGT  IGDPS R + R MM    I+ N E  K     FI +  G+  A+++N
Sbjct: 63  NRPVVLLGGGTGYIGDPSGRTDMRSMMGPDVIRRNCECFKRQMERFIDFD-GENGAIVVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+LLR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 122 NADWLLNLNYIELLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K   C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 180 YKELGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLMNSEGNKMGKTARGAVWL 239

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP+ F+QYWRNI DADV+   + LT +P+ EID M   +G ++N AK+I+A ++T
Sbjct: 240 DPEKTSPFEFYQYWRNIADADVMKCIRMLTFIPVEEIDAMDGWEGAQLNRAKEILAYDLT 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA +A   ++  F  ++   +MP   + ++++ +G + ++ L+V    A S +
Sbjct: 300 ALVHGEEEARRAKETSVSLFTGAMDDDNMPFTEVGEEKLVQGSINIMDLLVLCRLAASKS 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           EARR +    I+++   + +    +          I +  GKK
Sbjct: 360 EARRLITQGGIQVSQKRVESIDFTVTRNMLMDG--IIIQKGKK 400


>gi|167754077|ref|ZP_02426204.1| hypothetical protein ALIPUT_02365 [Alistipes putredinis DSM 17216]
 gi|167658702|gb|EDS02832.1| hypothetical protein ALIPUT_02365 [Alistipes putredinis DSM 17216]
          Length = 431

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 142/428 (33%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG IH I           + + TAY+G D TA SLH GHL  +M+L   Q 
Sbjct: 4   KNFVEELEWRGMIHSIMPGT--QEQLQKEMSTAYVGIDPTADSLHIGHLVSVMILKHFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GH+PI+L+GG T +IGDPS + + R ++  + ++ N E IK   +  + + +     A+
Sbjct: 62  CGHRPIALVGGATGMIGDPSGKSQERNLLDEKTLRHNQEAIKKQLAKLLDFESDAPNAAM 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  W+  I ++D +R+IG   +VN M++ +SV+ R     + +SF EF Y ++QAYD
Sbjct: 122 LVNNYDWMKGITFLDFIRDIGKLITVNYMMAKDSVKKRFNGEGEGMSFTEFTYQLVQAYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQ+GG+DQWGNI  G +L  R    + FALT PL+T A GTK GKT SG
Sbjct: 182 FLHLYETVGCKLQLGGADQWGNITTGTELIRRKAGGEAFALTCPLITKADGTKFGKTESG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            +WL+   TSPY F+Q+W N  D D   + K  T L    ID +         +   +K 
Sbjct: 242 NVWLDPRYTSPYKFYQFWLNTSDEDAKRYIKIFTLLDKQTIDDLIAEHDAAPHLRILQKR 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           +A E+T M+H +EE EKA  A+   F  +                 + +P   I++ E+ 
Sbjct: 302 LAQEVTVMIHSQEEYEKAVEASNILFGGATSEALRKLDEQTLLQVFEGVPQYKIARAELI 361

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + +    S  E R+ +++  + +N   +++    I   D      + +  
Sbjct: 362 -GLPFIELCAERSDIFPSKGECRKMVQAGGVSLNKEKVADPMRAIAESDLIDGKYLLVQK 420

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 421 GKKNYYLV 428


>gi|229072555|ref|ZP_04205757.1| Tyrosyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228710531|gb|EEL62504.1| Tyrosyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 419

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQASKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|68535935|ref|YP_250640.1| tyrosyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|97201322|sp|Q4JVY5|SYY_CORJK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68263534|emb|CAI37022.1| tyrS [Corynebacterium jeikeium K411]
          Length = 428

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 230/428 (53%), Gaps = 16/428 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     + +  L  RG I+Q ++   L    +Q  +T Y G+D T SSLHAGHL  L++L
Sbjct: 1   MSDNM-NIIDELQWRGLINQSTDLEALKEA-TQNPITLYCGFDPTGSSLHAGHLVPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
              Q+ GH+PI+L GG T +IGDP      R M+  ++I EN+  IK    +F+ +    
Sbjct: 59  KRFQQFGHRPITLAGGATGMIGDPRDVG-ERSMLTEEQIGENMVAIKKQLEAFVDFTEDS 117

Query: 120 --KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
              + A+M+NN  W+  +  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM
Sbjct: 118 DVDSPAVMVNNADWISQMNVIEYLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D+V L   +DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K 
Sbjct: 177 LLQANDYVHLHNEFDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKF 236

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKE 294
           GK+  G  +WL+ ++TSPY+++QY+ N  D+ V+ + +  T L   EI  + +   +   
Sbjct: 237 GKSTGGGKLWLDPQLTSPYSWYQYFINAGDSVVIDYLRWFTFLSQEEIAELERKVAEEPF 296

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSR 348
             EA++++A E+TT+VHG    E    AA   F  +       PT+          EV  
Sbjct: 297 KREAQRVLAREMTTLVHGAAATEAVELAAQALFGKAELQDLDEPTLASALQETEVAEVGA 356

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              +L L+V++G   S   ARR +      +NN  I + +     ++      + L  GK
Sbjct: 357 DATILDLLVESGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPSAEELLHGSWLVLRKGK 416

Query: 409 KNHIICHL 416
           K      +
Sbjct: 417 KRFAGARV 424


>gi|206970458|ref|ZP_03231411.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229082314|ref|ZP_04214777.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|206735035|gb|EDZ52204.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228700746|gb|EEL53269.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 419

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|303281116|ref|XP_003059850.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458505|gb|EEH55802.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 430

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 147/431 (34%), Positives = 224/431 (51%), Gaps = 23/431 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            + +L ERG +   +N  EL      G ++ Y G+D TA SLH G+L  +++L W Q+ G
Sbjct: 1   VVDVLRERGLLDACTNEDELREAAGDGSLSVYCGFDPTADSLHLGNLLGIVVLAWFQRCG 60

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-------KYGTGK 120
           H PI+L+GG T  +GDPS +   R ++    I  N+  I+ I    +         G   
Sbjct: 61  HTPIALLGGATGRVGDPSGKSAERPVLDDVTINANVAGIEKILRGVLANSASFAPPGDEL 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A +LNN  W   + +++ LR++G +  V  M++ +SV+SRL+ E+ +SF EF+Y +LQ
Sbjct: 121 KPARVLNNLDWFGGMGFLEFLRDVGKYARVGTMVAKDSVKSRLESERGMSFTEFSYQLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
            YDFV L +  +  +Q+GGSDQWGNI  G DL  R+       + LT PLL  A G K G
Sbjct: 181 GYDFVHLHREENVMVQVGGSDQWGNITAGTDLIRRISQRDGGAYGLTFPLLLKADGKKFG 240

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEI 295
           K+  GA+WL+ +  SPY F+Q+     DADVV F K LT +P+ EI+ M    K  G   
Sbjct: 241 KSEDGAVWLSPDRLSPYKFYQHLLQSTDADVVRFMKTLTFVPIEEIEAMEAAMKEDGYAP 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
           N A+K +A E+T  VHG     +A  A       +               +P+  +S  E
Sbjct: 301 NTAQKRLAEEVTRFVHGEAGLSQALKATEGLKPGADTVLDADTLEALAGDIPSAELSLGE 360

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V  G  ++ ++   G   S  EA+R +K    ++NN  + +E   I+  D      + L+
Sbjct: 361 V-VGRTVVDVMAATGLQKSKGEAKRLIKGGGARVNNVKVEDEGKVIEEGDVVDGRVLLLA 419

Query: 406 FGKKNHIICHL 416
            GKKN ++  +
Sbjct: 420 AGKKNKLLVRV 430


>gi|15677671|ref|NP_274832.1| tyrosyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81784231|sp|Q9JXY5|SYY_NEIMB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7227090|gb|AAF42170.1| tyrosyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984445|gb|EFV63418.1| tyrosyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325139655|gb|EGC62194.1| tyrosyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200896|gb|ADY96351.1| tyrosyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 431

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 157/428 (36%), Positives = 227/428 (53%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|228955333|ref|ZP_04117341.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804466|gb|EEM51077.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 419

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|254804336|ref|YP_003082557.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667878|emb|CBA03967.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 432

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 225/430 (52%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MKSVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+
Sbjct: 61  QAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYD 183
           M NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YD
Sbjct: 120 MANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I
Sbjct: 240 AVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T ++HG E    A   +   F            + +    +   EVS G+ ++  
Sbjct: 300 LAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEA 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +VK G A+S  EAR  + S A+ +N                ++   +  +         L
Sbjct: 360 LVKTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTIL 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 RRGKRNHALL 429


>gi|241759449|ref|ZP_04757553.1| tyrosine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320231|gb|EER56564.1| tyrosine--tRNA ligase [Neisseria flavescens SK114]
          Length = 432

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 225/430 (52%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MTSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+
Sbjct: 61  QAGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFE-GENAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YD
Sbjct: 120 MANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I
Sbjct: 240 AVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTL 355
           +A E+T ++HG E    A   +   F                   +   EVS  + ++  
Sbjct: 300 LAEEMTRLIHGEEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVET 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +VK G A+S  EAR  + S A+ +N                ++   +            +
Sbjct: 360 LVKTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIV 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 RRGKRNHALL 429


>gi|297561982|ref|YP_003680956.1| tyrosyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846430|gb|ADH68450.1| tyrosyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 432

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 246/434 (56%), Gaps = 22/434 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG + Q ++   L    + G +T Y G+D TA SLH GHLTQ++ L   Q
Sbjct: 1   MTDIIDELQWRGLLAQTTDLDALRKALADGPITLYCGFDPTAGSLHVGHLTQILTLARFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-----GTG 119
           + GH+PI+L+GGGT +IGDP   +  R++   + ++  ++ + G  S+F+++        
Sbjct: 61  QAGHRPIALVGGGTGLIGDPKP-NAERQLNSLETVRGWVDNLGGQLSAFLRFTPEGEQPE 119

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            TDA++ NN  WL  I  I+LLR++G  FSVN+ML+ E+VRSRL  E  +S+ EF+Y++L
Sbjct: 120 PTDAVLANNADWLGEINAIELLRDVGKHFSVNQMLARETVRSRLDGE-GMSYTEFSYVLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGT 235
           Q+YD+V+L + + C LQ GGSDQWGNI  G+DL  R+       +   LT+ LLT A GT
Sbjct: 179 QSYDYVQLYRRFGCTLQTGGSDQWGNITAGLDLVRRMDGNEPHGQAHGLTTNLLTKADGT 238

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGK 293
           K GKT SG++WL+ E+TSPY F+Q+W N DD DVV + K  +     EI+ + +   +  
Sbjct: 239 KFGKTESGSVWLDPELTSPYAFYQFWFNADDRDVVRYLKTFSFRDRDEIEELERQTEERP 298

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVS 347
           +   A++++A ++T +VHG EE  K   A++  F  +  S             + + EV 
Sbjct: 299 QARAAQRVLAEDLTVLVHGEEECRKVKEASLALFGRADLSDLDARTLEAALAEVPRAEVD 358

Query: 348 ---RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
               G+ +     ++G   S + ARR ++     +NN  +++ +  ++ +D      + L
Sbjct: 359 GPVDGLLVTDAFARSGLTPSKSAARRAIQEGGAYVNNVKVTDVEAVLRPEDVLQGRFVVL 418

Query: 405 SFGKKNHIICHLCG 418
             GK+N     L G
Sbjct: 419 RKGKRNIGGLVLNG 432


>gi|282856522|ref|ZP_06265797.1| tyrosine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585643|gb|EFB90936.1| tyrosine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 425

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 239/423 (56%), Gaps = 13/423 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + L +L  RGFI   ++   +  L  +G+VTAY+G+D TA SLH GHL  LM L WL
Sbjct: 1   MTENALEVLRARGFIDWTTDDGGVKELFGKGMVTAYVGFDPTADSLHVGHLIPLMGLAWL 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GGGT +IGDPS +   R ++   +I+ N+E +K   + F+ +  G+  A
Sbjct: 61  QRLGHRPIVLAGGGTGMIGDPSMKSNERNLLTMDQIRHNVEGVKKQLAHFVSFDCGENSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAY 182
           L++NN  WL ++ +++ LR++G FF++N+M++ E VRSR++   +SLSF EF+Y +LQ+Y
Sbjct: 121 LLVNNYDWLSAMNFLEFLRDVGKFFTINKMIAKEHVRSRIEDPTKSLSFTEFSYTLLQSY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTL 241
           DF  L   Y CRLQ+GG+DQ GNI  GID   + +    ++  T+PLL T++G K GKT 
Sbjct: 181 DFYHLYTTYGCRLQLGGNDQQGNITSGIDFIRKHEEGAAVYGGTNPLLLTSAGHKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
            GA+WL+   TSPY F+Q+W N +DA +    +  T LP+ EID      +Q  E  EA+
Sbjct: 241 GGAVWLDPAKTSPYQFYQFWVNSEDATIAKTLRYFTFLPLEEIDALVARHMQSPEKREAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR--------GMG 351
           +++A EIT +VHG   A     A+   F  S   + +    +                M 
Sbjct: 301 RVLAYEITKLVHGENVAANVRHASEILFGGSYTPEDLTEDMLHTLAAETPCGTVDSLPMP 360

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   + + G   S  EA+R + +  + +N    +++  Q++ QD        +  GKK +
Sbjct: 361 LADALAETGACKSKGEAKRLIAAGGVSVNGVR-ADDGAQLREQDVLCGYYSLIRLGKKKY 419

Query: 412 IIC 414
            + 
Sbjct: 420 FMI 422


>gi|332826992|gb|EGJ99786.1| tyrosyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 430

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 231/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I +I    E      + + + Y+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIQEIMPGTE--EQLQKELTSGYVGIDPTADSLHIGHLVSVMILKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N E IK   + F+ +       AL+
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQESIKKQLAKFLDFESDKPNAALL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL  +  + +SF EF+Y ++QAYD
Sbjct: 120 VNNYDWMKDFSFLNFIRDIGKHITVNYMMAKDSVKKRLSGEASEGMSFTEFSYQLMQAYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +   CR+QMGGSDQWGNI  G +L  R  + + FAL  PL+T A GTK GKT SG
Sbjct: 180 YLHLYETLGCRIQMGGSDQWGNITTGTELIRRKASGEAFALVCPLITKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL +  TSPY F+Q+W N+ D D   + K  T L   EI+   M +     +   +K 
Sbjct: 240 NVWLERRYTSPYKFYQFWLNVSDDDAEKYIKIFTALSKEEIEALVMEQKSAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVS 347
           +A E+T MVH  E+ ++A  A+   F  +                 + +PT  ISKDE+S
Sbjct: 300 LAKEVTVMVHSEEDYDQAVEASNILFGNATADALKKLDEETFLQVFEGVPTFDISKDELS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+ + A    S  E R+ +++  + +N   + N    I      +   I    
Sbjct: 360 AGIKVVDLLTENASMFPSKGEMRKTVQAGGVMVNKVKVENFDDMIDSSFLIAGKYIIAQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|326334271|ref|ZP_08200492.1| tyrosine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325947934|gb|EGD40053.1| tyrosine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 423

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 221/420 (52%), Gaps = 15/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I   ++   L    + G V  YIG+D TA SLH G+L Q+ +   LQ+ G
Sbjct: 7   LLDDLEWRGLIADSTDRDALREALAGGSVRFYIGFDPTAPSLHMGNLLQITMAMRLQQAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P  L+GG T +IGDP      R +   + ++E + K++     F+ +  G+T A M+N
Sbjct: 67  HTPYVLVGGATGMIGDPRD-SGERTLNSPETVKEWVGKVRSQIERFVSFE-GETAATMVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR+IG  F VNRML+ ++V+ RL  E  +S+ EF+Y++LQ+ D++ L
Sbjct: 125 NADWTASLSVIDFLRDIGKHFPVNRMLARDTVKKRL--EDGISYTEFSYILLQSMDYLNL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ GGSDQWGNI  G++L  R+    + A T+PL+T A GTK GKT  GA+WL
Sbjct: 183 FRTHGVSLQFGGSDQWGNITGGVELVRRVTGETVHAFTTPLITKADGTKYGKTEGGALWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F Q+W N++DA V    +  T L   EI+ +     ++     A+K +A  
Sbjct: 243 DPTMMSPYAFHQFWLNVEDAKVGEMLRVFTFLSHEEIETLEAQHAEKPFLRVAQKALADH 302

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGL---LTLI 356
           +TT+VHG  E E+A  AA   F     +    T            E+ RG  L   + L 
Sbjct: 303 MTTLVHGAGETEQAKQAAAALFGGGDLATLSSTTLAAAITEAGAVELERGEELPTYVDLF 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V AG  +S  EARR +      +NN  + + +  +  ++    G I L  GKK      L
Sbjct: 363 VAAGLVSSKGEARRTISEGGAYVNNVRVEDAEGALDEKELLGDGWIVLRRGKKKFAGVRL 422


>gi|228961312|ref|ZP_04122929.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798365|gb|EEM45361.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 420

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|30023099|ref|NP_834730.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229130324|ref|ZP_04259283.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|81433183|sp|Q815S0|SYY2_BACCR RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|29898659|gb|AAP11931.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228653257|gb|EEL09136.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 420

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEVEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|218231964|ref|YP_002369874.1| tyrosyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229153258|ref|ZP_04281436.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296505505|ref|YP_003667205.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|218159921|gb|ACK59913.1| tyrosine--tRNA ligase [Bacillus cereus B4264]
 gi|228629862|gb|EEK86513.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296326557|gb|ADH09485.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 420

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|220912279|ref|YP_002487588.1| tyrosyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859157|gb|ACL39499.1| tyrosyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 437

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 144/436 (33%), Positives = 226/436 (51%), Gaps = 22/436 (5%)

Query: 1   MPAFKS-----------DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSL 49
           MP   S           +    L  RG +H  ++  EL+ L + G VT Y G+D TA SL
Sbjct: 1   MPDINSLETQQNDPTFANVWQELKWRGLVHVSTDEAELEKLLAGGPVTYYCGFDPTAPSL 60

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H G+L QL+++  LQ  GHKP+ L+GG T +IGDP      R +     + E +  ++  
Sbjct: 61  HLGNLVQLLVMRRLQLAGHKPLGLVGGSTGMIGDPRP-TAERTLNTKDTVAEWVGYLQAQ 119

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
              F+ +  G   A M+NN  W   +  ID LRE+G  F V  ML  ++V SRL  ++ +
Sbjct: 120 VRRFLSFE-GDNAARMVNNLDWTAPLSAIDFLREVGKHFRVGTMLRKDAVASRLSSDEGI 178

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           S+ EF+Y ILQ  D+++L ++Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+
Sbjct: 179 SYTEFSYQILQGMDYLQLYRDYACMLQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLI 238

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           T + GTK GK+   AIWL+  M S Y F+Q+W N  DADVV   K  T L  +EI+ +A 
Sbjct: 239 TNSDGTKFGKSEGNAIWLDAGMCSAYAFYQFWLNTADADVVDRLKVFTFLTRAEIEDIAT 298

Query: 290 L--QGKEINEAKKIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
              +     E ++ +A E+T++VHG     +  A +A    +  + +    T+  +  E+
Sbjct: 299 SVAERPFAREGQRKLAFEVTSLVHGVEATEKVIAASAALFGNGDLGALDKQTLQAATSEL 358

Query: 347 S------RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                    +G++ L+V +G + S + ARR +      +NN  + + +  I   +     
Sbjct: 359 PTATVQVDALGIVDLLVASGLSESKSAARRTVGEGGAYVNNEKVLDPETVIAESELLHGQ 418

Query: 401 NIKLSFGKKNHIICHL 416
            + L  GKKN     +
Sbjct: 419 YLLLRRGKKNLATVEV 434


>gi|237736065|ref|ZP_04566546.1| tyrosyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421879|gb|EEO36926.1| tyrosyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 407

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 171/412 (41%), Positives = 248/412 (60%), Gaps = 8/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + + +L ERG+I Q ++  E+     +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 3   NRNVVDVLLERGYIKQFTHEDEIREALGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT++IGDPS R + R+MM  + I  N+  IK     FI +  G   A+
Sbjct: 63  KFGHRPIALVGGGTAMIGDPSGRTDMRQMMTKETIAHNVACIKKQMEKFIDFSEG--KAI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL  + Y+D +R+IG+ FSVNRML+ E  + R+  E  LSFLEFNYM++Q YDF
Sbjct: 121 LENNADWLLGLNYVDFIRDIGAHFSVNRMLAAECFKQRM--EAGLSFLEFNYMLMQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L K + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA
Sbjct: 179 LVLNKKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   TSPY F+QYWRN+ DADV      LT LPM E+ R+  L+G EIN+AKKI+A 
Sbjct: 239 LWLDAAKTSPYEFYQYWRNVADADVEKCLALLTFLPMDEVRRLGALEGAEINQAKKILAY 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG EEA KA   A   F       ++P+I    D++  G  LL L+V+     S
Sbjct: 299 EVTKLIHGEEEALKAQQGAEGAFGGGD-MSNVPSIDFPSDKL--GTELLDLLVEHKLIKS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E R+ +  N +   ++ +++  ++I  +D    G   +  GKK      L
Sbjct: 356 KGEGRKFVTQNGLTAADNKVTDFAMKIT-EDLFKDGEFVVKIGKKKIYRVVL 406


>gi|125623269|ref|YP_001031752.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|189083658|sp|A2RIB1|SYY_LACLM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|124492077|emb|CAL97006.1| Tyrosine-tRNA ligase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070019|gb|ADJ59419.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 419

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 143/422 (33%), Positives = 223/422 (52%), Gaps = 18/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  
Sbjct: 2   NIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M 
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMT 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G  F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRM--ESGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIW
Sbjct: 180 LNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+DDAD V   K  T L + EI  + +     +    A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+ ++VHG+E  E+A   +   F      Q             P   I+ DE    + L+
Sbjct: 300 EVVSLVHGKEAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQIAPDE---DLTLI 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++  G A S  +AR  + + AI IN   +      +   D        +  GKK + +
Sbjct: 357 ELLISVGIAPSKRQAREDITNGAIYINGERVQELDYVLTDSDKIENRLTVIRRGKKKNFV 416

Query: 414 CH 415
             
Sbjct: 417 LT 418


>gi|332312039|gb|EGJ25134.1| Tyrosyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 429

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 154/421 (36%), Positives = 217/421 (51%), Gaps = 13/421 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   
Sbjct: 9   MKMNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GNSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLL 353
           K +A E+T  VH  E  E+A   +   F   + +     I     +V           L+
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDTEANLV 365

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + +
Sbjct: 366 DWLVTLGIEPSKRQAREDVANGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFL 425

Query: 414 C 414
            
Sbjct: 426 V 426


>gi|228923799|ref|ZP_04087077.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835928|gb|EEM81291.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 419

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L     ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEGKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAARVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|20809023|ref|NP_624194.1| tyrosyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81480271|sp|Q8R6V5|SYY_THETN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|20517693|gb|AAM25798.1| Tyrosyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 406

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 181/410 (44%), Positives = 262/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L +L ERG+I Q+++  E++ L  +  +T YIG+D TA SLH GHL Q+M +  +Q+ 
Sbjct: 2   SVLEVLKERGYIAQMTHEEEIEKLLEKEKITFYIGFDPTADSLHVGHLIQIMTMAHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT++IGDPS R + R+M+  +EI  N E  K     FI +  G   A+M 
Sbjct: 62  GHRPIVLLGGGTALIGDPSGRTDMRKMLTKEEIDRNAEAFKKQMERFIDFSEG--KAIME 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI+ LR+IG  F+VNRML  E+ ++R+  E+ L+FLEFNYM++QAYDF+E
Sbjct: 120 NNAKWLLGLNYIEFLRDIGVHFTVNRMLEAEAFKTRM--ERGLTFLEFNYMLMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +QMGG+DQW NII G++L  + +  + + +T  LLTT+ G KMGKT  GAIW
Sbjct: 178 LYRRYGCVMQMGGNDQWSNIIAGVELIRKKEGKQAYGMTFVLLTTSEGKKMGKTEKGAIW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSPY F+QYWRNI DADV      LT LPM E+ R+ +L+ KEINEAKK++A E+
Sbjct: 238 LDPKKTSPYEFYQYWRNIGDADVEKALALLTFLPMDEVRRLGRLRDKEINEAKKVLAFEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA KA  AA   F+     +H+P+I +S+D +  G  ++ ++ +A    S +
Sbjct: 298 TKLVHGEEEALKAQKAAEALFEGGGEMEHVPSIEVSQDII--GRKIVDVLFEAKVIPSKS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + IN+  + N    IK +       I +  GKK +    +
Sbjct: 356 EGRRLIQQGGLYINDKRVENVDECIKEE-MVKENAILVRKGKKEYHRLLV 404


>gi|325197662|gb|ADY93118.1| tyrosyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 431

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 157/428 (36%), Positives = 227/428 (53%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|313633051|gb|EFR99966.1| tyrosyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
 gi|313638014|gb|EFS03301.1| tyrosyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 419

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 152/418 (36%), Positives = 217/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E   +A   +   F   + +     I     +V         M L+  +
Sbjct: 299 AAEMTKFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEEAEMNLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN   + + +  +   D        +  GKK + + 
Sbjct: 359 VSLGIEPSKRQAREDVANGAIYINGERLQDLEKVMDASDRIENKFTIVRRGKKKYFLV 416


>gi|329118944|ref|ZP_08247639.1| tyrosine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464972|gb|EGF11262.1| tyrosine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 432

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 228/430 (53%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  +  L  RG I Q ++   LD   ++  ++ Y G+D TA SLH GHL  ++ L   Q
Sbjct: 1   MTSIIQDLQSRGLIAQTTDIAALDAFLTENKISLYCGFDPTADSLHIGHLLPVLALRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GG T +IGDPSF+   R +   + +   +  I+     F+ +  G+  A+
Sbjct: 61  QAGHTPIALVGGATGMIGDPSFKAVERSLNTPETVAGWVASIRAQLEPFLSFE-GENAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           M NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ+YD
Sbjct: 120 MANNADWFGGMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDDVGISFTEFAYTLLQSYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHGATLQIGGSDQWGNITNGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN + TSPY F+Q+W  + DADV  F K  T L ++EID             EA+++
Sbjct: 240 AVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVAEIDAIEAKDQASGAKPEAQRV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T ++HG E  + A   +   F            + +    +   EVS G+ ++  
Sbjct: 300 LAEEMTRLIHGEEALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGLNVVEA 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +VK G A S  EAR  + S A+ +N                ++   +K +         L
Sbjct: 360 LVKTGLAQSNKEARGFVNSKAVLLNGQAAEANNPNPSAERPDDAYLLKDEHKRFGKYTLL 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 RRGKRNHALL 429


>gi|311113284|ref|YP_003984506.1| tyrosine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944778|gb|ADP41072.1| tyrosine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 434

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++   L+   S   +T Y GYD TA+SLH GHL QL+++  LQ  
Sbjct: 17  NIWQELKWRGLVHVSTDEEALEKALSDEKLTFYTGYDPTAASLHLGHLVQLLVMRRLQLA 76

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T +IGDP  +   R +   + + E ++ ++     F+ +  G+  A M+
Sbjct: 77  GHYPLGLVGGFTGLIGDPR-QTSERVLNSREVVAEWVQSLRSQIERFLSFE-GENAARMV 134

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR+IG  F V  M+  E V  RL  E+ +S+ EF+Y ILQ  D++E
Sbjct: 135 NNLDWGGQLSAIDFLRDIGKHFRVGTMVKKEIVAKRLNSEEGISYTEFSYQILQGLDYLE 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIW
Sbjct: 195 LNRQYGCTLQTGGSDQWGNLTSGTELIRKVEGKTVHAIGTPLITNSDGTKFGKSEGNAIW 254

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           LN EM SPY F+Q+W N  DADV+   K  T L  +EI              E +K +A 
Sbjct: 255 LNPEMCSPYAFYQFWLNTADADVIDRLKVFTFLTRAEIGEYEHKVEAEAYKRETQKRLAY 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGLL 353
           E+T +VHG E  E+A  A+   F                   +P++ +S D +     L+
Sbjct: 315 EVTALVHGVEPTEQAIAASEALFGKGDFAALDESTLQAVMDELPSVELSSDRLD----LI 370

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           T + + GFA+S +EARR LK     +N   +  E  +I  +         +  GKKN   
Sbjct: 371 TALTELGFASSKSEARRILKEGGASVNGVKVQGEDARISSEQLLHGKYAIVRRGKKNQGA 430

Query: 414 CHLC 417
             + 
Sbjct: 431 ITVV 434


>gi|228942237|ref|ZP_04104777.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975167|ref|ZP_04135726.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981806|ref|ZP_04142101.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228777918|gb|EEM26190.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784688|gb|EEM32708.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817571|gb|EEM63656.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942891|gb|AEA18787.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 419

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++  + + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGIDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|325133486|gb|EGC56149.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325143735|gb|EGC66052.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325206751|gb|ADZ02204.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 431

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 154/428 (35%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A   +   F            + +    +   E+S G+  +  +V
Sbjct: 301 EEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPVFEISDGINAVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|320537135|ref|ZP_08037107.1| tyrosyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146008|gb|EFW37652.1| tyrosyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 406

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 164/410 (40%), Positives = 240/410 (58%), Gaps = 7/410 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L +L ERGF  Q +N   L     +G ++ Y+G D T  SLH GH+  +     L 
Sbjct: 1   MNEALKVLQERGFFQQCTNLEGLSERMDKGPISFYVGIDPTGPSLHIGHMLPVFAARHLC 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHK   L GGGT+ IGDPS + E R+M+  + + +N+E I      F+ +        
Sbjct: 61  AFGHKACILAGGGTARIGDPSGKTEMRKMLSYETLDKNVESIIAQLGRFLDFD--GKTIF 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             NN+ WL ++ YID LREIGS FSVNRMLSFES + R+  E  LSF+EFNY +LQ+YDF
Sbjct: 119 HANNKDWLANLNYIDFLREIGSQFSVNRMLSFESYKRRM--ETGLSFIEFNYQLLQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + ++  +Q+GG DQWGNI+ G+DL  RL++ ++F LT  L+T A G KMGK+  GA
Sbjct: 177 LMLNEKHNIEMQIGGDDQWGNIVAGVDLIRRLRSKEVFGLTFALVTRADGQKMGKSEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+ ++ SPY F+QYWRN  DADV  F    T LP+ EID       + IN+AK+ +A 
Sbjct: 237 LFLDPKLVSPYEFFQYWRNTMDADVRKFMLLFTFLPIEEIDSYI---AENINKAKEKLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG+E A+ A   A   F        MPTI +      +G+ ++TL V+A  A+S
Sbjct: 294 EVTRLIHGKEAADSALEGARAAFGTGGDKSSMPTIEMPYTVFEKGIDIVTLFVEAQLASS 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EARR ++     +  + I + K  I  ++ +S   + L  GKK  +  
Sbjct: 354 KSEARRLIEQGGAFVGEATIKDIKAMINTENLNSEKELILRAGKKRFVRI 403


>gi|285808478|gb|ADC36002.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 259]
          Length = 421

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 148/420 (35%), Positives = 235/420 (55%), Gaps = 12/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D  S L  RG ++  +    +    + G +T YIG+D TASSLH G L  +M L  LQ+ 
Sbjct: 2   DLYSELEWRGMLYDGT--EGVREALAAGPITGYIGFDPTASSLHVGSLLTIMGLARLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GGGT +IGDPS + + R ++ S++++ N++ I+   + F+ +      A ++
Sbjct: 60  GHSPIAIVGGGTGLIGDPSGKTQERTLLSSEQVEANVQGIRAQLARFLDFDRPGNPARIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +  LR++G  F+VN M++ +SV+ RL+ E  +SF EF+Y+++Q+YD V 
Sbjct: 120 NNADWLVPMDLMSFLRDVGKHFTVNYMIAKDSVKRRLESEDGISFTEFSYLLMQSYDVVM 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C LQMGGSDQWGNI  GIDL  +L+  K   L  PL+TT++G K GKT +G +W
Sbjct: 180 LFDRYQCTLQMGGSDQWGNITAGIDLLRKLRGAKGHGLVWPLMTTSAGVKFGKTEAGTVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT--LPMSEIDRMAKLQGKEINEAKKIIAT 304
           L+  +TSP+ F+Q+W N DD D + + K  T       +    A  Q  E  EA++ +A 
Sbjct: 240 LDAALTSPFRFYQFWLNTDDRDAIRYLKLFTFLDRDAIDALAAAVAQHPERREAQRALAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--------RGMGLLTLI 356
            +TT VHG +  ++A  AA   F  +I   ++  + +  ++           GM L  ++
Sbjct: 300 AVTTAVHGDDHVQRAERAAEVLFAENIADANVDDVLMVFEDAPSSDLFLPAEGMPLAEML 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
                  S +EA R LKS  + +NN   ++E+ ++   D        L  G+K+H I  +
Sbjct: 360 ATVKLVPSKSEAMRLLKSGGVYVNNVRATDERARLTAADAIGGALFVLRKGRKDHHIVRV 419


>gi|229181362|ref|ZP_04308691.1| Tyrosyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228602098|gb|EEK59590.1| Tyrosyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 419

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLIKL 418


>gi|170743905|ref|YP_001772560.1| tyrosyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198179|gb|ACA20126.1| tyrosyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 426

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 214/413 (51%), Positives = 289/413 (69%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +S+FL +L ERG++HQ S+   +D    +G +TAY+GYD TA SLH GHL  +M+L WLQ
Sbjct: 12  RSEFLKVLIERGYVHQCSDFAGVDEAAREGRLTAYVGYDCTAPSLHIGHLLSIMMLHWLQ 71

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
            TG  P++LMGGGT+ +GDPS RDE+RR++  ++I  N  +I   F+ F+++G     A 
Sbjct: 72  ATGGTPVALMGGGTTRVGDPSGRDETRRILTVEQIDANKAEIGKTFARFLRFGEAAGLAR 131

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M +N  WL  + YI++LRE+G  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQAYDF
Sbjct: 132 MADNAEWLTQLNYIEMLREVGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQAYDF 191

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + Y   LQMGGSDQWGNI+ GIDLG RL TP+L ALT PL+TTASG KMGKT SGA
Sbjct: 192 VELNRRYGVTLQMGGSDQWGNIVTGIDLGRRLGTPQLHALTCPLMTTASGAKMGKTASGA 251

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN ++ SP+ +WQ+WRN +DADV  F +  T LP+ E DR+A L G EINEAKK++AT
Sbjct: 252 VWLNPDLLSPWEYWQFWRNTEDADVGRFLRLFTLLPLPETDRLAALGGAEINEAKKVLAT 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAGFA 362
           E T ++HGRE AE AA  A   F+     + +PT+ I +  ++ G+G+L       A   
Sbjct: 312 EATALLHGREAAEAAAETARRTFEEGAAPETLPTVEIPRAALAAGLGVLAAFGPDHAKLL 371

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR ++S  +K+N++ +S+E+  +   D    G IKLSFG+K H++  
Sbjct: 372 PSTSEARRQVRSGGLKVNDAAVSDERAVLGEGDLTGDGVIKLSFGRKKHVLLR 424


>gi|297181128|gb|ADI17326.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0070_17F14]
 gi|297181219|gb|ADI17414.1| tyrosyl-tRNA synthetase [uncultured Verrucomicrobiales bacterium
           HF0070_30L02]
          Length = 424

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 144/416 (34%), Positives = 214/416 (51%), Gaps = 16/416 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I   ++   L      G +T Y G+D TA SLH G+L  L+LL   Q  G
Sbjct: 10  ILDDLSARGLIQDTTDDAALRARLEAGPITLYCGFDPTADSLHVGNLVPLLLLRRFQDFG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L GG T ++GDPS R + R ++  + +  N+  IK      +  G     A +++
Sbjct: 70  HRPIALAGGATGMVGDPSGRSDERNLLGGETLDHNLAAIKEQLCLLLDIG---GQAQLVD 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+ ++  ++ LR+IG   +VN ML+ ES++SRL  EQ +S+ EF+YM+LQA DFV L
Sbjct: 127 NREWIENVTALEFLRDIGKLVTVNTMLAKESIKSRLDGEQGISYTEFSYMLLQANDFVSL 186

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                C LQ+GGSDQWGNI  GID+  R        LT PL+T + G K GKT  GA+WL
Sbjct: 187 HDRNGCELQVGGSDQWGNITAGIDMIRRKTGAHAHGLTVPLVTRSDGAKFGKTADGAVWL 246

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATE 305
           + E T PY F QYW   DD DV  F  ++T LP   +  +        E   A++++A E
Sbjct: 247 SAERTLPYEFHQYWMRTDDRDVERFLMQMTLLPTEGVRDVMAEHLRAPEQRSAQRVLADE 306

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQH--------MPTISISKDEVSRGMGLLTLIV 357
           +T ++HG  E  +A  AA   F                +P   ++ D +     ++ L+V
Sbjct: 307 VTALIHGPGEVRRANLAAGALFGGDELDGEAIEALRGIVPETELAADTLIGEEPVVDLLV 366

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             G  +S  +ARR +    I++N   I++    +          + +  GKK   +
Sbjct: 367 ATGVCSSKGDARRTVDQGGIRLNGEKIADGTTAVT---LVDERFVLIQKGKKQRHL 419


>gi|229032711|ref|ZP_04188672.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728606|gb|EEL79621.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 419

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFSQAVKITAALFSGDIKSLTADEIEQGFKEMPTFESSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|319639345|ref|ZP_07994096.1| tyrosyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399529|gb|EFV80199.1| tyrosyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 431

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIKDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKATERSLNSAETVAGWVESIRNQLTPFLSFE-GDNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F                   +   EVS  + ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVETLV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         +  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAEKPDDAYMLTDEHKRFGKYTIVRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|325971776|ref|YP_004247967.1| tyrosyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027014|gb|ADY13773.1| Tyrosyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 418

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 173/421 (41%), Positives = 246/421 (58%), Gaps = 11/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L +RGFI   ++   L  L  +  VT Y+G D T  SLH GH+     +  LQ
Sbjct: 1   MNTALQTLMDRGFIKACTDYDALSDLMDKEKVTFYVGADPTGRSLHIGHMVPFFAMHHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGK 120
           K GH PI+L+GGGT++IGDPS R E R+M+  +++ EN + IK    + + +      G 
Sbjct: 61  KAGHNPIALVGGGTAMIGDPSGRTEMRKMLTPEQVTENCKSIKAQLGTVVDFTEHPQEGM 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+MLNN  WL  + YI  LREIG  FSVNRML+FES + RL  E+ LSF+EFNY +LQ
Sbjct: 121 GKAIMLNNADWLTDLNYITFLREIGRHFSVNRMLTFESYKQRL--ERGLSFIEFNYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF  L + + CRLQ+GG DQWGNI+ GI+L  R+   + + LT  L+T + G KMGK+
Sbjct: 179 SYDFYVLNQEHGCRLQIGGDDQWGNIVSGIELIRRMNGAECYGLTFNLITRSDGHKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA++L+ E+ S Y+F+QYWRN++D DV+ F K  T LP+ EI +  K     IN+AK+
Sbjct: 239 EKGAVFLDPELFSAYDFYQYWRNVNDDDVIKFLKLFTFLPLEEIAQYEKADV-NINDAKE 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFD----MSIHSQHMPTISISKDEVSRGMGLLTLI 356
            +A E T ++HG EEAEKA  AA   F            MP+++I+  E+  G+ +L L 
Sbjct: 298 RLAYEQTKIIHGVEEAEKARIAAKTMFKGANLGQEGRDGMPSLAIAASELENGIPVLDLF 357

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +   A + ++ARR +   A  I  + I + K  I     D  G + L  GKK +    +
Sbjct: 358 SRTDLAATNSDARRLVAGGAAWIGETKIEDPKTLIDKTYLDGFGEMILRAGKKRYFRITI 417

Query: 417 C 417
            
Sbjct: 418 A 418


>gi|308176932|ref|YP_003916338.1| tyrosine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744395|emb|CBT75367.1| tyrosine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 441

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 227/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++  EL+   S+  VT Y G+D TA SLH G+L QL+ +  LQ  
Sbjct: 23  NVWQELKWRGLVHVSTDEAELERALSEETVTYYCGFDPTAPSLHLGNLVQLLNMRRLQLA 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDP  +   R +   + + E + K++   S F+    G+    ++
Sbjct: 83  GHKPLALVGGSTGLIGDPR-QTAERTLNTKETVTEWVSKLQAQVSRFLS-NEGENAVQLV 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR++G +F V  M+  E V +RL  ++ +S+ EF+Y +LQ YDF+E
Sbjct: 141 NNLDWTQQLSALDFLRDVGKYFRVGTMVKKEIVAARLNSDEGISYTEFSYQVLQGYDFLE 200

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G +L  +++   + A  +PL+T + GTK GK+   AIW
Sbjct: 201 LNRQYGCTLQTGGSDQWGNLTSGTELIRKVQGNSVHAYGTPLITNSDGTKFGKSEGNAIW 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ EM SPY F+Q+W N  DADV+   K  T L   +I  +     +      A++ +A 
Sbjct: 261 LDAEMCSPYTFYQFWLNASDADVIDRLKVFTFLTRKQIAELETEVAERPFKRIAQRTLAW 320

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVS------RGMGLLTLIV 357
           E+T++VHG++  E+   A+   F     +   +PT+     E+         +G+L ++V
Sbjct: 321 EVTSLVHGQQATEQVIAASAAVFGNGDLAAIDLPTLESVIAELPTAKVEADNLGILNVLV 380

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G + S +EARR +      +NN  ++    ++   DF       L  GKKN  +  L 
Sbjct: 381 ASGLSKSLSEARRTVNEGGAYVNNEKVAGIDTELAEADFLHGRYAILRRGKKNMAVVELA 440


>gi|289434878|ref|YP_003464750.1| hypothetical protein lse_1513 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171122|emb|CBH27664.1| tyrS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 419

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 217/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DV+ + K  T L  +EI  +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVIKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E   +A   +   F   + +     I     +V         M L+  +
Sbjct: 299 AAEMTKFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEETEMNLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN   + + +  +   D        +  GKK + + 
Sbjct: 359 VSLGIEPSKRQAREDVANGAIYINGERLQDLEKVMDASDRIENKFTIVRRGKKKYFLV 416


>gi|284801990|ref|YP_003413855.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995132|ref|YP_003416900.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057552|gb|ADB68493.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060599|gb|ADB71538.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 429

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 154/421 (36%), Positives = 217/421 (51%), Gaps = 13/421 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   
Sbjct: 9   MKMNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GNSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLL 353
           K +A E+T  VH  E  E+A   +   F   + +     I     +V           L+
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSEANLV 365

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + +
Sbjct: 366 DWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFL 425

Query: 414 C 414
            
Sbjct: 426 V 426


>gi|297571517|ref|YP_003697291.1| tyrosyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931864|gb|ADH92672.1| tyrosyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 419

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 226/420 (53%), Gaps = 10/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             D L  L  RG I Q S+  EL    ++  ++ Y G+D TA+SLH GHL  + ++  LQ
Sbjct: 1   MVDVLEELQWRGLIAQHSDIDELRKALNEEKISFYCGFDPTAASLHHGHLVAVKMMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI L+GG T +IGDP  +   R +   + + +  + ++    S + +  G+  A+
Sbjct: 61  MAGHRPIVLVGGATGLIGDPRPKG-ERSLNTRETVAQWTQSLRDQLESLLDFD-GENAAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  W  S+  ID LR++G  F +  MLS + V  RL+ ++ +SF EF+Y ILQA D+
Sbjct: 119 TVNNLDWTQSMSAIDFLRDLGKHFRMGTMLSKDIVARRLQSDEGISFTEFSYQILQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y+C L++GG+DQWGNI+ G++L  +++   +  LT+ L+T + GTK GKT  GA
Sbjct: 179 LELFRRYNCTLELGGNDQWGNIVGGMELIRKVEGKSVHVLTNQLITKSDGTKFGKTEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WLN EM SPY F+Q+W N  D DV+   K  T LP   I+ +     +     EA++++
Sbjct: 239 VWLNPEMLSPYKFYQFWLNTADNDVIRMLKVFTFLPKERIEELEVEVAERAFAREAQRVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT VHG E   +   A+   F     +             +   +   G  L  ++
Sbjct: 299 ADEVTTWVHGAETTARVKDASAVLFGKKEPADVDAATLRDAVAELPSVKAELGASLQDVL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V   F      ARR + +  + +NN  + +E+  +   D  + G I +  G+KN  + H+
Sbjct: 359 VDLAFEKGRGAARRTIGAGGVSLNNQKVDDEERVLTEADVLAGGVILIRKGRKNMAVIHI 418


>gi|297180364|gb|ADI16581.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_01E20]
          Length = 426

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 160/418 (38%), Positives = 232/418 (55%), Gaps = 10/418 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG + Q+S+ + L      G  + Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 6   FMDELRWRGLLTQVSDEQGLIDYLDSGCQSLYCGFDPTADSLHVGSLVPLLALRRFQLQG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALML 126
           H+P+ L+GG T +IGDPS RD  R +   + +    + ++   S F+++     T A ++
Sbjct: 66  HRPLLLLGGATGMIGDPSGRDNERSLNELETVSNWTQALREQVSGFLEFDSKDGTAAKIV 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W   +  ++ LR+IG  FSVN M+  +SV+SRL +  + +S+ EF+YM+LQA DF+
Sbjct: 126 NNLDWTRDLPVVEFLRDIGKHFSVNSMIQRDSVKSRLARTNEGISYTEFSYMLLQAMDFL 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            LA+N  C LQ+GGSDQWGNII GIDL  R      FA T PL+T A GTK GK+ +GA+
Sbjct: 186 RLAQNESCFLQIGGSDQWGNIISGIDLIRRYTGRSAFAFTMPLVTKADGTKFGKSAAGAV 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           W++   TS Y F+Q+W N  D DVV F K  T L  SEI    +  L   E+ EA+K +A
Sbjct: 246 WIDPRKTSQYVFYQFWLNTADEDVVKFLKLFTFLSQSEIQSLEVEVLDRPELREAQKKLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIV 357
            E+TT+VHG++    A   +   F   I        + +    +     + G GLL +IV
Sbjct: 306 QEVTTIVHGKQAVVAAERISAALFAGDIGQLLESDLRELQQDGMPCTSCAVGTGLLAVIV 365

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +AG   ST EAR+ +++N IK+N   I +    +  +D        L  GKKN+ +  
Sbjct: 366 EAGLTKSTGEARKLIQANGIKLNGDSIDDVGRGLTFEDALFKRFYLLRKGKKNYHLIT 423


>gi|300779179|ref|ZP_07089037.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504689|gb|EFK35829.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 431

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 153/434 (35%), Positives = 231/434 (53%), Gaps = 26/434 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            + F+  L  RG    +      D   ++ V TAYIG+D TA SLH G L Q+ +L   Q
Sbjct: 1   MNSFIEELKWRGLFADMMPGT--DEQLNKEVTTAYIGFDPTADSLHIGSLIQIKILAHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDA 123
           + GHKPI+L+GG T +IGDPS +   R ++  + +   ++ +K   S F+ + G     A
Sbjct: 59  QHGHKPIALVGGATGMIGDPSGKSAERNLLDEETLLHYVDCLKNQLSKFLNFEGNEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
            ++NN  W+ +I ++D  + IG   +VN M++ +SV+ R   E     +SF EF Y ++Q
Sbjct: 119 ELVNNYDWMKNISFLDFAKNIGKNITVNYMMAKDSVKKRFSGEGGADGMSFTEFTYQLIQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +N + +LQMGGSDQWGNI  G +L  R    + FALT PL+T A G+K GK+
Sbjct: 179 GYDFLHLYQNNNVKLQMGGSDQWGNITTGTELIRRKAQGEAFALTVPLITKADGSKFGKS 238

Query: 241 LS-GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
            S    WL+K+ TSPY F+Q+W N  D D   F K  T L   EI+ + +         +
Sbjct: 239 ESGENYWLDKKKTSPYKFYQFWLNATDEDAERFIKFYTFLGKEEIEALIEEHKTAPHERK 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            +K +A E+T  VHGREE EKA  A+   F  S                   +P   I+K
Sbjct: 299 LQKKLAEEVTVWVHGREEYEKALKASEILFGRSTAEDLVSLDEETFLEVFDGVPQKEIAK 358

Query: 344 DEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +V  G+ ++ L+ + +GF  S +EA+R +K NAI +N   +++        D      +
Sbjct: 359 ADV-LGVNIVDLLSEKSGFLKSKSEAQREIKGNAISVNKQKVND-TFTANETDLIDGKFL 416

Query: 403 KLSFGKKNHIICHL 416
            L  GKK++ I  +
Sbjct: 417 LLQKGKKSYFIVKV 430


>gi|229193348|ref|ZP_04320298.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590149|gb|EEK48018.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 419

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDSEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|225022590|ref|ZP_03711782.1| hypothetical protein CORMATOL_02632 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944498|gb|EEG25707.1| hypothetical protein CORMATOL_02632 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 418

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 153/421 (36%), Positives = 230/421 (54%), Gaps = 16/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++  EL   C +  +T Y G+D T +SLHAGHL  L++L   Q  
Sbjct: 2   NIVDELLWRGLINQATDVDELRAAC-EQPITLYCGFDPTGASLHAGHLVPLIMLKRFQNA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ ++L GG T +IGDP      R M+  +EI  NI  I+    SFI Y  G   A+M+
Sbjct: 61  GHRVLTLAGGATGMIGDPRDVG-ERSMLSEEEIAHNIAAIQDQIRSFIDYTDG--KAIMV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+YD+V 
Sbjct: 118 NNADWLGKFSLIDYLRDLGKNFSLNTMLDRETVKRRLGSD-GISYTEFSYMLLQSYDYVH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 177 LNREYDCVLQIGGGDQWGNIVSGVDLNRRMNQTKVHGLTVPLVTDAQGQKFGKSTGGGKL 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E+TSPY+++QY+ N  D+ V+ + +  T L  +EI        +   + EA++ +A
Sbjct: 237 WLDPELTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQAEIAEYEVTVQERPHLREAQRRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG    E    AA   F  +  ++         +   ++++        ++ L
Sbjct: 297 QEMTTLVHGSAATEAVELAAQALFGRAELTELDEATLRGALQETTVAEITPQDPRTIVDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     +NN  IS+E  +    D      + L  GKK      
Sbjct: 357 LVASGLAASKGAARRTIKEGGAYVNNQRISSEDWEPTADDLLYGTWLVLRRGKKTFAGAK 416

Query: 416 L 416
           +
Sbjct: 417 I 417


>gi|304388370|ref|ZP_07370481.1| tyrosine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337636|gb|EFM03794.1| tyrosine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 431

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 153/428 (35%), Positives = 224/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A   +   F            + +    +   E+S G+  +  +V
Sbjct: 301 EEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEISDGINAVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|52140461|ref|YP_086368.1| tyrosyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81685533|sp|Q631P9|SYY2_BACCZ RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|51973930|gb|AAU15480.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 419

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 214/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K  D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYKKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|260907482|ref|ZP_05915804.1| tyrosyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 428

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 153/429 (35%), Positives = 230/429 (53%), Gaps = 18/429 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D  S L  RG +   ++   L    ++  +T Y+G+D TA SLH G+L QL+    LQ
Sbjct: 1   MTDIFSELKARGLVSVSTDEAALQKALNEESLTYYVGFDPTAPSLHMGNLVQLITAARLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH P++L+GG T +IGDP      R +   + ++E +EKI+     F+ +  G   A 
Sbjct: 61  KAGHNPLALVGGATGLIGDPRM-SGERTLNPREVVEEWLEKIRAQVEKFLDFS-GPNAAQ 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  ID LR+IG  F +NRML+ ESV +RL  E  +SF EF+Y +LQ  D+
Sbjct: 119 VVNNYEWTSEMSAIDFLRDIGKHFPMNRMLAKESVSARLNSEAGISFTEFSYQVLQGNDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ GGSDQWGN+  G+DL  R++   + AL +PL+T A GTK GKT SG 
Sbjct: 179 LELHRRYGCSLQTGGSDQWGNLTSGVDLIRRVEQHSVHALATPLITKADGTKFGKTESGT 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL++ +TSPY F Q+W N DD DVV + K  +   + EI+              A+K++
Sbjct: 239 VWLDESLTSPYAFSQFWLNADDRDVVKYLKVFSFRSLEEIEQIEAEFTAAPHTRLAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI-----------HSQHMPTISISKDEVSRGMG 351
           A ++TT+VHG+E+ E+A  AA   F                +  +P   +S  +++ G+ 
Sbjct: 299 AEDVTTLVHGKEKYEQAIAAASALFGGGELASLDASTLGAATSELPRGDVSSAQLAEGVP 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLSFGK 408
           +    V AG   S  EARR +K     +NN  ++ +   +   +       G I L  GK
Sbjct: 359 VADAFVTAGIVKSKGEARRVIKDGGAYVNNVKVTGDDQTLTPTEVLPTEGGGVILLRRGK 418

Query: 409 KNHIICHLC 417
           K      + 
Sbjct: 419 KTLGAVDII 427


>gi|261393182|emb|CAX50800.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase; TyrRS) [Neisseria
           meningitidis 8013]
          Length = 431

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 154/428 (35%), Positives = 225/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A   +   F            + +    +   E+S G+  +  +V
Sbjct: 301 EEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPVFEISDGINAVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|73662343|ref|YP_301124.1| tyrosyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|97202126|sp|Q49YG2|SYY_STAS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72494858|dbj|BAE18179.1| tyrosyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 420

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 140/425 (32%), Positives = 226/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L  RG I+Q ++   ++ + ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MTNALLEDLKWRGLIYQQTDESGIENILNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+P+ L+GGGT +IGDPS + E R +    +++ N++ I        ++   +  A
Sbjct: 61  QEHGHRPLVLIGGGTGMIGDPSGKSEERTLQTEAQVETNVQGINKQMHKIFEFD-TEKGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN+ WL  I  ID LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA D
Sbjct: 120 KLVNNKDWLGQISLIDFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L + Y+C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+  + G K GKT  
Sbjct: 178 FGHLNRTYNCKVQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVVKSDGKKFGKTEG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL+   TSPY F+Q+W N  D DV+ F K  T L   EI+    +  +   + EA+K
Sbjct: 238 GAVWLDAAKTSPYEFYQFWINTTDDDVIKFLKYFTFLEQEEIEALEKSLNEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG++  + A   +   F          ++    + +P + +S    S   
Sbjct: 298 ALAENVTRFIHGQDALDDAIRISQALFAGDLQSLSASELKEGFKDVPQVELS----SETR 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ +IV+ G ++S  +AR  + + AI IN     +   ++  +D        +  GKK 
Sbjct: 354 NIVEVIVETGISSSKRQAREDVNNGAIYINGIRQQDVNYELTSEDKIENEFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|261363934|ref|ZP_05976817.1| tyrosine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567948|gb|EFC89508.1| tyrosine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 431

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 154/428 (35%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFE-GENAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A   +   F            + +    +   EVS  + ++  +V
Sbjct: 301 EEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDDLNVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +            +  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIVRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|289423529|ref|ZP_06425330.1| tyrosine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156031|gb|EFD04695.1| tyrosine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 407

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 171/396 (43%), Positives = 246/396 (62%), Gaps = 5/396 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q+++  E+  L + G    Y+G+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELLARGLVAQVTDEEEIRELVNTGKAKFYLGFDPTADSLHVGHFMALCLMRRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           + P+ L+GGGT  IGDPS R + R+MM  + IQ N +  K   S FI++G G    +M+N
Sbjct: 63  NTPVVLVGGGTGYIGDPSGRTDMRQMMTPETIQHNCDCFKVQMSKFIEFGEG--KGIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G  FSVN ML  E  ++R+  E+ LSFLEFNYM++Q+YDF  L
Sbjct: 121 NADWLLQLNYIDMLREVGPHFSVNNMLRAECYKNRM--EKGLSFLEFNYMVMQSYDFYHL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K   C +Q+GG DQW N++ G DL  R      FA+T PLLT A GTKMGKT  GA+WL
Sbjct: 179 YKELGCNMQLGGDDQWSNLLGGTDLIRRKTGANAFAMTIPLLTKADGTKMGKTAGGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+DDADVV+F K+LT L + EI  M   +G ++NEAK+++A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVDDADVVNFIKKLTFLSLEEIKPMESWEGAKLNEAKELLAYEMT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
           ++VH +EEA+KA  A+   F   + S +MPT  +   ++  G + L  L+++ G A + +
Sbjct: 299 SLVHSKEEADKAQEASRALFRGGVDSANMPTTELDSSKLVDGSIALDELMIEIGLAPTKS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           E RR ++   + +N+S+  + K+ I   D      I
Sbjct: 359 EVRRLVQQGGVSVNDSVADDCKMAITEADLRDGVTI 394


>gi|229199218|ref|ZP_04325896.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584235|gb|EEK42375.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 419

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|315303381|ref|ZP_07873993.1| tyrosyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628249|gb|EFR96770.1| tyrosyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 419

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 217/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSIEQISKNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E   +A   +   F   + +     I     +V         M L+  +
Sbjct: 299 AAEMTKFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEEAEMNLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN   + + +  I   D        +  GKK + + 
Sbjct: 359 VSLGVEPSKRQAREDVMNGAIYINGERVQDLEKAIGESDRIENKFTIVRRGKKKYFLI 416


>gi|225077237|ref|ZP_03720436.1| hypothetical protein NEIFLAOT_02292 [Neisseria flavescens
           NRL30031/H210]
 gi|224951381|gb|EEG32590.1| hypothetical protein NEIFLAOT_02292 [Neisseria flavescens
           NRL30031/H210]
          Length = 431

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 227/428 (53%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLKPFLSFE-GENAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS  + ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPTFEVSESLNVVETLV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         +  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAEKPDDAYMLTDEHKRFGKYTIVRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|209694434|ref|YP_002262362.1| tyrosyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|254783564|sp|B6EHW3|SYY_ALISL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|208008385|emb|CAQ78540.1| tyrosyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 426

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 152/423 (35%), Positives = 226/423 (53%), Gaps = 19/423 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++ L  L  RG I Q +   EL    S    T Y G+D TA SLH G L  L++L
Sbjct: 1   MTA-TNELLQDLKARGLIAQCTADEELAEHLSTDCRTLYCGFDPTADSLHIGSLVPLLVL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP++L+GG T +IGDPSF+   R++  S  + + + KI+   S+F+ +   K
Sbjct: 60  KRFQQAGHKPLALVGGATGLIGDPSFKAAERQLNTSDVVGDWVNKIRAQVSAFVDFNESK 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+  I  I+ +R+IG  FSVN M+  ESV+ R+ RE   +SF EF+YM+L
Sbjct: 120 NGAEVVNNLDWIGEINVIEFMRDIGKHFSVNSMIQKESVKQRIDREGSGISFTEFSYMLL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF  L K  +C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GK
Sbjct: 180 QSYDFAALNKAKECTLQIGGSDQWGNITGGIDLTRRMNRNKVFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           T SG IWL+   TSPY F+Q+W    DADV  F +  T L + EI    +     +    
Sbjct: 240 TESGTIWLDPSKTSPYAFFQFWLGTADADVYDFLRFFTFLSVDEIAAFEESDKSVQGRPA 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEV 346
            + ++A E+T +VHG E    +       F              +    +PT  +   E 
Sbjct: 300 GQGVLAKEVTRLVHGEEGLASSERITAALFSGDLASLTETDLAQLAQDGLPTTELEASE- 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                ++ ++ ++  A S   AR  + + A+ +N   +++ ++ +K +D        +  
Sbjct: 359 ---QTIVEVLTQSELAKSNKMAREFIGNGAVSVNGEKVADAEVILKKEDALFGKYSVIKR 415

Query: 407 GKK 409
           GKK
Sbjct: 416 GKK 418


>gi|228988321|ref|ZP_04148414.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229049757|ref|ZP_04194314.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229147620|ref|ZP_04275964.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229158672|ref|ZP_04286730.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228624656|gb|EEK81425.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228635829|gb|EEK92315.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228722670|gb|EEL74058.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228771386|gb|EEM19859.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 420

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|161869380|ref|YP_001598547.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189083662|sp|A9M1J5|SYY_NEIM0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|161594933|gb|ABX72593.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 431

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 225/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRYGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|118480150|ref|YP_897301.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196047556|ref|ZP_03114765.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|222098519|ref|YP_002532577.1| tyrosyl-tRNA synthetase [Bacillus cereus Q1]
 gi|225867053|ref|YP_002752431.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229187314|ref|ZP_04314458.1| Tyrosyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118419375|gb|ABK87794.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196021590|gb|EDX60288.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|221242578|gb|ACM15288.1| tyrosyl-trna synthetase [Bacillus cereus Q1]
 gi|225785692|gb|ACO25909.1| tyrosine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596165|gb|EEK53841.1| Tyrosyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 419

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|325954724|ref|YP_004238384.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437342|gb|ADX67806.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 432

 Score =  359 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 149/434 (34%), Positives = 235/434 (54%), Gaps = 24/434 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L+ RG IH I          ++ + T Y+G+D TA SLH G L  + LL  L
Sbjct: 1   MNNPLIEELTWRGLIHNIMPGTA--EQLNKEMTTGYVGFDPTADSLHVGSLVPIFLLVHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q+ GH+P++L+GG T +IGDP+ +   R ++  + +++ +  IK   + F+ +       
Sbjct: 59  QRHGHRPVALVGGATGMIGDPTGKSAERNLLDEETLEKYVNGIKAQLARFLDFDGRNGNS 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQ 180
           A+++NN  W+    +ID +R +G   +VN M++ +SV+SRL  +    +SF EF Y ++Q
Sbjct: 119 AILVNNYDWMKDFSFIDFVRNVGKHLTVNYMMAKDSVKSRLSAESNVGMSFTEFTYQLIQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++ L +    +LQMGGSDQWGNI  G +L  R    + FA T PL T A GTK GK+
Sbjct: 179 GYDYLYLYEKLGVKLQMGGSDQWGNITTGTELIRRTIQGEAFAFTCPLTTKADGTKFGKS 238

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
                IWL+K+ TSPY F+Q+W N  DAD   + K  T L    ID + +       + E
Sbjct: 239 EGGENIWLDKKRTSPYKFYQFWLNQADADCEKYIKIYTFLDKETIDDLIEHHRKEPHLRE 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISK 343
            ++ +ATEIT MVHG +E  KA  A+   F  S                 + +P   I+K
Sbjct: 299 LQRKLATEITIMVHGVDELHKAEKASQMLFGKSTSEDLKSLDTDTFLSVFEGVPQAIITK 358

Query: 344 DEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +++  G+ ++ ++V+ +GF  S +EARR L +NAI +N   I++E   +      +   +
Sbjct: 359 EDLENGLAIVDVLVEKSGFLKSNSEARRELATNAISVNKEKITDE-FILDTSHLINDKYV 417

Query: 403 KLSFGKKNHIICHL 416
            L  GKKN+ I  +
Sbjct: 418 LLQKGKKNYFILLV 431


>gi|46907828|ref|YP_014217.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093460|ref|ZP_00231224.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254931537|ref|ZP_05264896.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254993889|ref|ZP_05276079.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|81403260|sp|Q71Z70|SYY_LISMF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46881097|gb|AAT04394.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018188|gb|EAL08957.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|293583092|gb|EFF95124.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328464964|gb|EGF36243.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 419

 Score =  359 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 216/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V           L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDTEANLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + + 
Sbjct: 359 VTLGIEPSKRQAREDVANGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 416


>gi|229094185|ref|ZP_04225264.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689177|gb|EEL42999.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 420

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|297171957|gb|ADI22943.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0500_35G12]
          Length = 428

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 148/422 (35%), Positives = 219/422 (51%), Gaps = 14/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG +   ++   L      G VT Y G+D TA SLH GHL  L+ L   Q  
Sbjct: 5   SILDDLLARGLVQDSTDREALRERLDAGPVTLYCGFDPTADSLHIGHLVPLLALRRFQDA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG---TGKTDA 123
           GH+P++L GG T +IGDPS R E R ++  +E+  N+E +     +F+++     G   A
Sbjct: 65  GHRPVALAGGATGMIGDPSGRSEERNLLAGEELSANVEAVAAQLRAFLRFDDLGPGDQAA 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L+L+N  W   ++ ++ LR++G   +V  ML+ ESV++RL  EQ LSF EF+YM+LQA D
Sbjct: 125 LLLDNREWTVGVEVLEFLRQVGKHVTVGTMLAKESVKARLSGEQGLSFTEFSYMLLQAND 184

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL + + C LQ+GGSDQWGNI  GIDL  R     +F LT PL+T + G K GKT  G
Sbjct: 185 FYELHQRHGCELQIGGSDQWGNITAGIDLVRRRTGSTVFGLTVPLVTRSDGAKFGKTADG 244

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            +WL+   T PY   QY+  IDD DV     +LT +P++E+  +        E   A++ 
Sbjct: 245 TVWLDPARTLPYELHQYFLQIDDRDVEQLLLQLTLVPVAEVAEVMAGHAASPEGRTAQRR 304

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHM--------PTISISKDEVSRGMGLL 353
           +A E+ T+VHG EE  +A  AA   F  +  +  +        P   +    +     L+
Sbjct: 305 LAEEVCTLVHGGEETVRADLAARGLFGATPPTVEILEALRGIVPETIVELAALGGQESLV 364

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHI 412
             +V +G   S  +ARR +    + +N    S E   +          + L  GK+  H+
Sbjct: 365 DALVASGLCGSRGDARRTIAGGGVSVNGDRQSGEVSALPAGALVDGRFVLLQRGKRIRHL 424

Query: 413 IC 414
           + 
Sbjct: 425 LV 426


>gi|325204797|gb|ADZ00251.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 431

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 154/428 (35%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS  + ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPTFEVSESLNVVETLV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNNKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|49481095|ref|YP_039086.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394327|sp|Q6HBJ0|SYY2_BACHK RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|49332651|gb|AAT63297.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 419

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 214/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHQPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|42784257|ref|NP_981504.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81408561|sp|Q72Y10|SYY2_BACC1 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|42740188|gb|AAS44112.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 419

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITEALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|331002727|ref|ZP_08326242.1| tyrosyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330407140|gb|EGG86644.1| tyrosyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 408

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 163/410 (39%), Positives = 246/410 (60%), Gaps = 6/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I Q++N  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   NCYDELKARGLIAQVTNEEEISKMINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++G     A M+
Sbjct: 62  GNKPIALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSRFIEFGED--KARMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y++ +R+IG  FSVN ML  +   +R+     LSFLEFNYMILQ+YDF +
Sbjct: 120 NNADWLRDLNYMEFIRDIGPHFSVNNMLRAKCYENRM--ANGLSFLEFNYMILQSYDFYK 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT+ GA+W
Sbjct: 178 LFLDYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTVGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   T+P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+I+A  +
Sbjct: 238 LDPNKTTPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSAWEGAKLNEAKEILAMHL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG+EEA+KA  A+   F       ++PT  +  ++   G + L  ++V +G + + 
Sbjct: 298 TELVHGKEEADKANAASKSLFVGGGDMSNVPTYILQPEDYRDGTIDLSGVLVVSGLSNTR 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +EARR+++   + I   +I + K     +DF   G + +  GKKN     
Sbjct: 358 SEARRNIEQGGVSIEGEVIKDVKKTFTKEDFAGEG-LLIKRGKKNFCKVK 406


>gi|227875725|ref|ZP_03993853.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269976726|ref|ZP_06183702.1| tyrosyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|306819000|ref|ZP_07452717.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307700327|ref|ZP_07637367.1| tyrosine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227843667|gb|EEJ53848.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935091|gb|EEZ91649.1| tyrosyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|304648193|gb|EFM45501.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307614538|gb|EFN93767.1| tyrosine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 420

 Score =  359 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 145/418 (34%), Positives = 227/418 (54%), Gaps = 19/418 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD +  L  RG + Q ++   L    ++G VT Y G+D TA+SLH GHL QL+++  LQ
Sbjct: 1   MSDLIDELQWRGLVKQHTDLEALRAALNEGSVTFYCGFDPTAASLHHGHLVQLIMMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDP      R++   + + E +EK+K     F+ +  G   A 
Sbjct: 61  LAGHHPIALVGGATGLIGDPRM-TAERQLQDKETVSEWVEKLKIQIGKFLDFD-GANPAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  IDLLR++G  F +  ML+ ++V  RLK E+ +S+ EF+Y ILQA DF
Sbjct: 119 MVNNRDWTEPLSAIDLLRDLGKHFRMGTMLAKDAVARRLKSEEGISYTEFSYQILQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GA
Sbjct: 179 LQLYRKYGATLETGGNDQWGNLVGGMDLIRKVEGADVHVMTTPLITKSDGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWL+ EM SPY F+Q+W N++DADV+ F K  T +   EI+ + +   +      A+K +
Sbjct: 239 IWLDPEMLSPYAFYQFWLNVEDADVIHFLKVFTFMSREEIEDLERQTAENPGARAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMG 351
           A  +T +VHG EE  +   A+   F      +            +P   +   E      
Sbjct: 299 AEAVTALVHGAEETSRVKAASAALFGSGDLREVNGDTLVAATADLPHAPVKIGE----TT 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +L L+V +G       A+R + S    INN  +++E   +   D      +    GK+
Sbjct: 355 ILDLLVTSGLEKGVGAAKRTIASGGAYINNEKVADEGRVVTQDDVLPGKVVLFRRGKR 412


>gi|30265113|ref|NP_847490.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530623|ref|YP_021972.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187924|ref|YP_031177.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317058|ref|ZP_00390017.1| COG0162: Tyrosyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165870040|ref|ZP_02214697.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167636569|ref|ZP_02394864.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641773|ref|ZP_02400015.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689360|ref|ZP_02880553.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170709106|ref|ZP_02899534.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655386|ref|ZP_02936884.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569231|ref|ZP_03022127.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196032753|ref|ZP_03100166.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218906267|ref|YP_002454101.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227817844|ref|YP_002817853.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917703|ref|ZP_04081244.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228930098|ref|ZP_04093108.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936350|ref|ZP_04099148.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948798|ref|ZP_04111074.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124608|ref|ZP_04253793.1| Tyrosyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229602713|ref|YP_002869306.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686485|ref|ZP_05150344.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724484|ref|ZP_05186268.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735692|ref|ZP_05193399.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744222|ref|ZP_05201902.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254750984|ref|ZP_05203023.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254756974|ref|ZP_05209002.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583842|sp|Q81XC6|SYY2_BACAN RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|30259790|gb|AAP28976.1| tyrosine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505771|gb|AAT34447.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181851|gb|AAT57227.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164714363|gb|EDR19883.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510256|gb|EDR85660.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528042|gb|EDR90845.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126008|gb|EDS94907.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666656|gb|EDT17426.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080137|gb|EDT65231.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559671|gb|EDV13660.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195994182|gb|EDX58137.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218538895|gb|ACK91293.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227006923|gb|ACP16666.1| tyrosine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228658948|gb|EEL14603.1| Tyrosyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228810855|gb|EEM57200.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823182|gb|EEM69016.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829597|gb|EEM75224.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841940|gb|EEM87046.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229267121|gb|ACQ48758.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 419

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|206976616|ref|ZP_03237521.1| tyrosyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962550|ref|YP_002341122.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141803|ref|ZP_04270331.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206745102|gb|EDZ56504.1| tyrosyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068299|gb|ACJ82549.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228641639|gb|EEK97942.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 419

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITGALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|301056559|ref|YP_003794770.1| tyrosyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378728|gb|ADK07632.1| tyrosyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 419

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITTALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|311899091|dbj|BAJ31499.1| putative tyrosyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 421

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 228/421 (54%), Gaps = 10/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG I   ++   L    + G VT Y G+D TA SLH G+L QL+ +  +Q
Sbjct: 1   MTDIVDELQWRGLIALSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQLLTMRRIQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G+ P+ L+GG T +IGDP      R +   + +   +++++   S F+ +  G+  A 
Sbjct: 61  RAGNLPLGLVGGATGLIGDPKP-TAERVLNDPETVAAWVDRLRAQVSRFLDFE-GEYAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  I LLR++G +F VN M++ E+V  RL  +  +S+ EF+Y ILQ  DF
Sbjct: 119 IVNNLDWTSGMSAISLLRDVGKYFRVNNMIAKEAVARRLNSDAGISYTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ GGSDQWGN+  G DL  + ++  + AL +PL+T A GTK GKT SG 
Sbjct: 179 LELNRRYGCTLQTGGSDQWGNLTAGTDLIRKAESRSVHALATPLITKADGTKFGKTESGT 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ E+T+PY F+Q+W N DD DV  F +  +     EI+++ +   +      A++ +
Sbjct: 239 VWLDPELTTPYAFYQFWLNADDRDVAKFLRIFSFRTREEIEQLERDTAERPAARLAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++ E+   A+   F         P         + K  V+    ++ L+
Sbjct: 299 AEELTTLVHGADQYERVVAASKALFGQGDLVDLEPATLASALAEVPKATVAELGQIVDLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G A S + ARR +K     +NN+ +++E+      D      I L  GK+N     L
Sbjct: 359 VETGLAPSRSGARRTIKEGGAYLNNAKVTDEEAVATTTDLLHGRWILLRRGKRNLAAVEL 418

Query: 417 C 417
            
Sbjct: 419 A 419


>gi|218900219|ref|YP_002448630.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903572|ref|ZP_04067693.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228968188|ref|ZP_04129188.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|218544372|gb|ACK96766.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228791491|gb|EEM39093.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856001|gb|EEN00540.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 420

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLKKERIDELAAKVEVEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFHSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|88801697|ref|ZP_01117225.1| tyrosyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782355|gb|EAR13532.1| tyrosyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 430

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 139/433 (32%), Positives = 230/433 (53%), Gaps = 23/433 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG ++      E      + + +AY+G+D TA SLH G+L  +MLL   Q
Sbjct: 1   MKNFIEELQWRGMLNDSMPGTE--EHLLEEMRSAYVGFDPTADSLHIGNLVPIMLLAHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           + GHKPI+L+GG T +IGDPS +   R ++  + ++ N E +K    +F+ + +  +  A
Sbjct: 59  RCGHKPIALVGGATGMIGDPSGKSSERNLLDEKTLRHNQECVKAQLGNFLDFKSKTENAA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQA 181
           L++NN  W+  I +++ +R++G   SVN M++ +SV++R+  + ++ +SF EF Y ++Q 
Sbjct: 119 LLVNNYDWMKEISFLEFIRDVGKHISVNYMMAKDSVKNRISSESKEGMSFTEFTYQMVQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +     LQMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK+ 
Sbjct: 179 YDFLHLFRENATTLQMGGSDQWGNITTGTELIRRIAGGKGYAITCPLITKSDGSKFGKSE 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAK 299
            G +WL+ + TS Y F+QYW N  D D   + +  T L    ++ +       + +   +
Sbjct: 239 GGNVWLDAKRTSAYKFYQYWLNTSDEDAEKYIRIFTFLDQKTVESLIAEHSEAQHMRVLQ 298

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDE 345
           K +  E+T +VHG+E  EKA  A+   F  S                   +P  ++S   
Sbjct: 299 KRLGEEVTLLVHGKEAYEKAIAASNILFGKSTAADLKALDEQTFLDVFDGVPQATVSLAA 358

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G+ ++  +     F  S  +ARR LK NAI +N   I  E   I  +D  +   + L
Sbjct: 359 IEEGLDMIGALAAQTSFLDSNGDARRALKENAISVNKEKIK-ENYTISKEDLIANKYVLL 417

Query: 405 SFGKKNHIICHLC 417
             GKK + +  + 
Sbjct: 418 QRGKKTYYLLVVA 430


>gi|47567310|ref|ZP_00238023.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47555931|gb|EAL14269.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 420

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLMKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|196039579|ref|ZP_03106884.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029739|gb|EDX68341.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 420

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAAKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|325201519|gb|ADY96973.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207498|gb|ADZ02950.1| tyrosyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 431

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 226/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|251795542|ref|YP_003010273.1| tyrosyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543168|gb|ACT00187.1| tyrosyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 419

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 213/421 (50%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L S+  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDAEGLRELTSEKAVSLYCGVDPTGDSMHIGHLIPFMVLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R +   ++I+ N+E +            G  +  M+
Sbjct: 62  GHRPVILIGGATGTIGDPSGRTSERSLQTLEQIEANVEALGAQLRKLF-LTEGDNNMRMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  E  +SF EF+Y ILQ+ DF+ 
Sbjct: 121 NNYDWTHKINVIEFLRDYGKNFSINTMLAKDVVSSRL--ESGISFTEFSYQILQSLDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  G+DL  + +    K F LT PL+  A GTK GKT  GA
Sbjct: 179 LFREEDVQLQIGGSDQWGNITSGLDLIRKKEGSESKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ E T+PY F+Q+W N DD DVV + K  T L   EI+             EA+K +
Sbjct: 239 IWLDPEKTTPYEFYQFWANTDDRDVVKYLKYFTFLSKEEIEGLAEKVATEPHKREAQKKL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  ++A       F   I S     I     E+      +    ++  +
Sbjct: 299 AEEMTRFVHSEELLQQALRITAALFSGDIKSLSADEIEQGFKEMPTFESTNEAKNIVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++  L++  +       I +  GKK + +  +
Sbjct: 359 VDLGIEPSKRQAREDITNGAISMNGERVTDLTLEVSSEHAIGGRFIIIRKGKKKYSLVKM 418

Query: 417 C 417
            
Sbjct: 419 A 419


>gi|288928869|ref|ZP_06422715.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329853|gb|EFC68438.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 433

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 144/436 (33%), Positives = 218/436 (50%), Gaps = 27/436 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MKKNFVEELRWRGMLAQIMPGTE--ELLQKETVTAYLGTDPTADSLHIGHLAGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q  GHKPI L+GG T +IGDPS +   R ++ S+ +  N E IK   + F+ +   G   
Sbjct: 59  QMCGHKPIILVGGATGMIGDPSGKSAERNLLDSKTLYHNQECIKAQVAKFLDFDAKGDNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A M+NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AEMVNNYDWMKDFSFLDFARTVGKHITVNYMMAKDSVKKRLNGDARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A GTK G
Sbjct: 179 GYDFLHLYETKGCKLQLGGNDQWGNMTTGAELIRRTLGIENEAYALTCPLITKADGTKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           KT  G IWL+ + TSPY F+Q+W N+ DAD   + K  T+L    ID     + +     
Sbjct: 239 KTEGGNIWLDAKRTSPYMFYQFWLNVSDADAERYIKIFTSLDKETIDALVAEQNEDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISIS 342
             ++ +A E+T MVH +   ++A  A+   F  +                 + +P   + 
Sbjct: 299 PLQRRLAEEVTVMVHSQAALDQAMEASNILFGKATKENLLKLDEQTLLDVFEGVPHYELD 358

Query: 343 KDEVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           K  +  G   + L          S  E R+ ++   + +N   ++     +   D     
Sbjct: 359 KALL--GQPAIDLFTREDVPVFASKGEMRKLVQGGGVSLNKEKLAAADRPVTADDLIDGK 416

Query: 401 NIKLSFGKKNHIICHL 416
            + +  GKKN+ +  +
Sbjct: 417 YLLVQRGKKNYYLLIV 432


>gi|283853234|ref|ZP_06370486.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571407|gb|EFC19415.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 424

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 219/423 (51%), Gaps = 14/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    LS RG +HQ S+   L           Y G+D TA SLH G+L  L+ L    K 
Sbjct: 2   NIFDELSWRGLLHQTSDDAGLRDHLETPGRVLYCGFDPTADSLHIGNLVPLLALARFAKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDPS +D+ R++     +  + EKIK    +F +          +
Sbjct: 62  GHKPLFLLGGATGLIGDPSGKDKERQLKTEDLVGASAEKIKAQAMAFFERLGVADAVTPV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W   I  I+ LR+ G  F++N ML+ +SV+SR+ + E  +S+ EF+YMILQ+ DF 
Sbjct: 122 NNLDWTRPISIIEFLRDTGKHFTINYMLAKDSVKSRIGREETGISYTEFSYMILQSLDFE 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG DQ+GNI  G++L  R    + + LT PL+TTASG K GK+  GAI
Sbjct: 182 HLCRTQGCTLQIGGGDQFGNITAGLELIRRKTGRQAYGLTFPLITTASGAKFGKSEKGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           +LN E+TSPY F+QYW N DD DVV+F +  T L   +I+ +A        +  A+K +A
Sbjct: 242 FLNPELTSPYAFYQYWINADDRDVVNFLRYFTFLSQEDIEALAGQTEAEPHLRAAQKRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD----------EVSRGMGLL 353
            E T M+HG  E  K        F     +  +   ++              +     L 
Sbjct: 302 RETTAMIHGDAELAKVEAVTEALFGGGDLTT-VDAATLKAALQAAPGRNYPTLGDVPPLP 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+       S ++AR+ +K+  + INN  ++ E   +  +DF     + L  GKKN+ +
Sbjct: 361 KLLADLALCPSNSQARKDIKAGGVSINNVRVTAEDRTLVPEDFLGGDLLILRKGKKNYGV 420

Query: 414 CHL 416
             L
Sbjct: 421 VTL 423


>gi|304382219|ref|ZP_07364726.1| tyrosine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336576|gb|EFM02805.1| tyrosine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 432

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 144/435 (33%), Positives = 223/435 (51%), Gaps = 26/435 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MTKNFVEELKWRGMLAQIMPGTE--ELLQKETVTAYLGTDPTADSLHIGHLCGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q+ GHKPI L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ +  T    
Sbjct: 59  QRCGHKPIILVGGATGMIGDPSGKSQERNLLDADTLYHNQECIKTQVAKFLDFDGTADNR 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A M+NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AEMVNNYEWMKDFSFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A G K G
Sbjct: 179 GYDFLHLYREKGCKLQLGGNDQWGNMTTGTELIRRTLGTEAEAYALTCPLITKADGNKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           KT SG +WL+   TSPY F+Q+W N+ D D   + K  T+L    ID +     ++    
Sbjct: 239 KTESGNVWLDPVRTSPYAFYQFWLNVTDDDAERYIKIFTSLEQEVIDTLIADHRQDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISIS 342
             ++ +A E+TTMVH  E    A  A+   F  +                 + +P  ++ 
Sbjct: 299 TLQRRLAEEVTTMVHSPEALAMAVEASNILFGKATKESLLKLNEQTLLDVFEGVPHFTLP 358

Query: 343 KDEVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            D++  G+    L   +    TS  E R+ ++   + +N   + + +  +  QD  +   
Sbjct: 359 ADKL--GLSAGELFTTEIPIFTSKGEMRKLVQGGGVSLNKEKLDSFEQPVTAQDLINGRY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQRGKKNYYLITV 431


>gi|327404296|ref|YP_004345134.1| Tyrosyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319804|gb|AEA44296.1| Tyrosyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 426

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 144/430 (33%), Positives = 230/430 (53%), Gaps = 22/430 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG +  I     L+    + + + Y+G+D T+ SLH G+L  +MLL   
Sbjct: 1   MKKNVIEELRWRGMVQDIMP--GLEEQLLKEMTSGYVGFDPTSDSLHVGNLLPIMLLKHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP +L+GG T ++GDPS +   R ++  + +  NI  ++     F+ +  G+  A
Sbjct: 59  QLAGHKPYALVGGATGMVGDPSGKSAERNLLDEKTLNHNIAAVQNQLRQFLDFEEGENKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  W+    +++ +R++G   +VN M + +SV+ R+  E  +SF EF+Y ++Q YD
Sbjct: 119 ELVNNFDWMRHFSFLEFIRDVGKHITVNYMSAKDSVKKRV--ETGISFTEFSYQLIQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L KN + ++Q GGSDQWGNI  G +L  ++ + + +A T PLLT A G K GKT SG
Sbjct: 177 FLHLYKNNNVKVQFGGSDQWGNITTGTELVRKIASGEAYAFTCPLLTKADGGKFGKTESG 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            +WL+ E TSPY F+Q+W N  DAD     +  T     EI+ + K       +   +K 
Sbjct: 237 TVWLDPEKTSPYAFYQFWLNASDADATKLIRFYTLKTKEEIEAIEKEHNEAPHLRILQKA 296

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVS 347
           IA E+T  VHG+E  + A  A+   F  S                   +P  ++ + E+ 
Sbjct: 297 IAEEVTIRVHGKEALDMAIAASNILFGKSTSEDLKKLSNDTFLSIFDGVPMATVKRSELI 356

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+  K GF  S  EA+R LK+NAI +N   +++  L +   D  +   I L  
Sbjct: 357 EGISIVDLLASKTGFLPSNGEAKRELKANAISLNKDKVAD-GLLVGPSDLINDKFILLGK 415

Query: 407 GKKNHIICHL 416
           GKKN+ I  +
Sbjct: 416 GKKNNYIVIV 425


>gi|323485671|ref|ZP_08091009.1| hypothetical protein HMPREF9474_02760 [Clostridium symbiosum
           WAL-14163]
 gi|323401021|gb|EGA93381.1| hypothetical protein HMPREF9474_02760 [Clostridium symbiosum
           WAL-14163]
          Length = 411

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 173/410 (42%), Positives = 251/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIGNMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R++ R+MM  + IQ N +  K   S FI +  G   A+M+N
Sbjct: 63  NKPIALLGGGTGMIGDPSGRNDLRQMMTVETIQHNCDCFKQQMSRFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q+YDF  L
Sbjct: 121 NAEWLMGLNYVELLREVGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRNI DADV+   + LT LP+ +I+ M K +G ++N AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNIADADVLKCLRMLTFLPIEQINEMDKWEGSQLNTAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATSTN 366
            +VHG  EAEKA  A+   F    ++  MPT  +++++ +   + +LT++ K+G A S +
Sbjct: 299 NLVHGEAEAEKAKEASRALFTSG-NAADMPTAELTEEDFNGDEIDILTILQKSGLAPSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   + ++   + + K           G I +  GKKN     L
Sbjct: 358 EARRNVEQGGVAVDGEAVKDSKAVFTKAQLSGDG-IVVKRGKKNFKKVIL 406


>gi|90407450|ref|ZP_01215634.1| tyrosyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311481|gb|EAS39582.1| tyrosyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 423

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 222/419 (52%), Gaps = 18/419 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L  RG I Q +   EL    S G  T Y G+D TA SLH G L  L+ L   Q
Sbjct: 1   MNTLLEDLKARGLIAQTTADEELHEHLSSGCRTLYCGFDPTADSLHIGSLVPLLTLKRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP++L+GG T +IGDPSF+   R++     ++  + KIK   S+FIK+G  K  A 
Sbjct: 61  DAGHKPLALVGGATGLIGDPSFKAAERKLNTDDVVENWVAKIKAQVSAFIKFGDAKNAAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYD 183
           ++NN  W+  +  I  LR++G  FSVN M+  ESV+ R+ RE   +SF EF+YM+LQ+YD
Sbjct: 121 VVNNLDWISKMDAISFLRDVGKHFSVNAMIQKESVKQRIDREGAGISFTEFSYMLLQSYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L ++ DC LQ+GGSDQWGNI  GIDL  R+   K++ LT PL+T A GTK GKT SG
Sbjct: 181 FAALNESKDCTLQIGGSDQWGNITGGIDLTRRMNKKKVYGLTLPLVTKADGTKFGKTESG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W    DADV  F +  T L ++EID +       +   + + I
Sbjct: 241 TIWLDATKTSPYAFYQFWITTLDADVYKFLRFFTFLSIAEIDAIEAQDKAAQGRPQGQAI 300

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGM 350
           +A E+T +VHG      A       F   +               +P+  +S  E     
Sbjct: 301 LAKEVTKIVHGETGLASAERITEALFSGDLSALSLSDLGQLAQDGLPSTQVSGTE----K 356

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            L+ L+  +  A S   AR  + + A+ +N    ++ +  I  +D        +  GK+
Sbjct: 357 SLVELLTSSELAKSNKMAREFISNGAVSVNGEKQTDSEAIILRKDALFGQYTVIKRGKR 415


>gi|239940297|ref|ZP_04692234.1| putative tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL
           15998]
 gi|239986779|ref|ZP_04707443.1| putative tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL
           11379]
 gi|291443730|ref|ZP_06583120.1| tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346677|gb|EFE73581.1| tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 423

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 229/422 (54%), Gaps = 11/422 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G KP++L+GG T  IGDP      R +   + I   + +++G    F+ +  G   A 
Sbjct: 61  QAGLKPLALVGGATGQIGDPRP-TAERTLNDPETIAAWVRRLRGQIEPFLTFE-GPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  GIDL  RL+    + AL +PL+T A GTK GK+ SG
Sbjct: 179 LELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAVVHALATPLMTKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD DV  + + L+     E++ + KL  +      A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDVSRYLRILSFRSREELEELEKLTEERPQARNAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG E+      A+   F     ++            +    V+    L+ L
Sbjct: 299 LAEELTTLVHGGEQCAAVIAASKALFGQGDLAELDEATLSAALSEVPHATVAELGPLVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G A S + ARR +K     +NN  + + ++     +      + L  GKKN     
Sbjct: 359 LVEVGLAPSKSGARRTVKEGGAYVNNVKVVDGEVAPDAGELLHGRWLVLRRGKKNLAAVE 418

Query: 416 LC 417
           + 
Sbjct: 419 VS 420


>gi|229112512|ref|ZP_04242049.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228670892|gb|EEL26199.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 420

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMIKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|16803638|ref|NP_465123.1| tyrosyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224499178|ref|ZP_03667527.1| tyrosyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|254824342|ref|ZP_05229343.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254832000|ref|ZP_05236655.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|255522125|ref|ZP_05389362.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|81508953|sp|Q8Y6T4|SYY_LISMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16411027|emb|CAC99676.1| tyrosyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|293593576|gb|EFG01337.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
          Length = 419

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 216/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V           L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSEANLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + + 
Sbjct: 359 VTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 416


>gi|257462926|ref|ZP_05627331.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060546|ref|ZP_07925031.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686222|gb|EFS23057.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 402

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 178/412 (43%), Positives = 242/412 (58%), Gaps = 12/412 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MENVFHVLQERGYLKQFTHEEEIRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  G   A+
Sbjct: 61  KYGHRPIALVGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL  + YID +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF
Sbjct: 119 LANNADWLWDLNYIDFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L K YDC LQ+GG DQW N+I G++L  + +    +A+T  LLT   G KMGKT  GA
Sbjct: 177 LVLNKKYDCVLQLGGDDQWSNMIAGVELIRKKEQKSAYAMTCTLLTNKEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+DDADV      LT LPM E+ R    Q + INEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFLPMEEVKRFVSFQDERINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT M+HG EEA KA  AA   F        +P + ++      G  LL  +V      +
Sbjct: 297 EITKMIHGEEEALKAQKAAEALFSGGTDLTTVPKLEVAL-----GEELLNALVDNNVLKT 351

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI-ICH 415
            +E RR ++  A+ + N  +S+    I  + F       L  GKK    +  
Sbjct: 352 KSEGRRLMQQGAMSLENIKLSDPAYLISEESFHGD--ALLKLGKKKFYQLIR 401


>gi|242280905|ref|YP_002993034.1| tyrosyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242123799|gb|ACS81495.1| tyrosyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 422

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 227/424 (53%), Gaps = 18/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I+Q+S+  ++           Y G+D TA SLH G+L  L+ L  +++ 
Sbjct: 2   NIYDELKWRGLINQVSDEEKVREYLDTPGQYMYCGFDPTADSLHIGNLVPLLSLVRMKRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS +D+ R     ++++     I+    +F++  TG   A ++
Sbjct: 62  GHNPLFLLGGATGRIGDPSGKDKEREFTSIEKVESQAANIRTQIEAFVERNTG-EKAEVV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I ++D+LR++G  FSVN M++ ESV+ R  + +  +S+ EF+YM+LQ+YDF 
Sbjct: 121 NNYDWMKEISFLDMLRDVGKHFSVNWMMAKESVKGRFGRDDVGISYTEFSYMLLQSYDFY 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L     C+LQ+GG DQWGNI  G +L  R    + FA+T PL+TTASG K GK+   A+
Sbjct: 181 HLFNEKGCQLQIGGGDQWGNITAGCELIRRKAQGEGFAVTFPLITTASGQKFGKSEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           +LN E+TSPY F+Q+W N DD DV+ F K  T L   EI  +AK       +  A K +A
Sbjct: 241 FLNAELTSPYTFYQFWINTDDRDVIKFLKYFTFLTEEEIAEIAKEHEEAPHLRAAHKRLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGMGL 352
            E T M+HG+EE EK   A    F                 +  P +  +K ++     L
Sbjct: 301 EETTIMIHGKEELEKVQAATAALFGKGDIMSVDAATLRGAMEAAPGVEYAKADLPD---L 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             +++  G   S  +AR+ ++   + INN  +++        DF     + +  GKKN+ 
Sbjct: 358 PQILLDLGMVKSKGQARKDIQGGGLYINNERVADFDYVPGDDDFIGGECMLIRKGKKNYG 417

Query: 413 ICHL 416
           +  L
Sbjct: 418 LVTL 421


>gi|185535515|gb|ACC77865.1| tyrosyl-tRNA synthetase [Staphylococcus xylosus]
          Length = 420

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 138/425 (32%), Positives = 228/425 (53%), Gaps = 20/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L  RG ++Q ++   ++ + ++  VT Y G D TA SLH GHL   + L   
Sbjct: 1   MANALLEDLKWRGLVYQQTDESGIEEILNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+P+ L+GGGT +IGDPS + E R++    +++ N++ I        ++G  +  A
Sbjct: 61  QEHGHRPLVLIGGGTGMIGDPSGKSEERKLQTEDQVEVNVQGISNQMHKIFEFG-TEKGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN+ WL  I  ID LR+ G    VN ML+ +S+++RL  E  +SF EF Y ILQA D
Sbjct: 120 KLVNNKDWLGQISLIDFLRDYGKHVGVNYMLAKDSIQTRL--EHGISFTEFTYTILQAID 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           F  L K ++C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+  + G K GKT  
Sbjct: 178 FGHLNKTFNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVVKSDGKKFGKTEG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL+   TSPY F+Q+W N  D DV+ F K  T L   EI+    +  +   + EA+K
Sbjct: 238 GAVWLDASKTSPYEFYQFWINTTDDDVIKFLKYFTFLEKEEIEALEKSLNEAPHLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGM 350
            +A  +T  +HG+   + A             ++   ++    + +P + ++ +      
Sbjct: 298 ALAENVTRFIHGQAALDDAIRISKALFAGDLQSLSAMELKEGFKDVPQVELNHET----T 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  IV++G ++S  +AR  + + AI IN     +   ++  +D        +  GKK 
Sbjct: 354 NIVEAIVESGISSSKRQAREDVNNGAIYINGVRQQDVNYELTNEDKIEDEFTIIRRGKKK 413

Query: 411 HIICH 415
           + + +
Sbjct: 414 YFMVN 418


>gi|297583580|ref|YP_003699360.1| tyrosyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142037|gb|ADH98794.1| tyrosyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 424

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 153/430 (35%), Positives = 218/430 (50%), Gaps = 30/430 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG +HQ+++   L  L  Q  V  Y G+D T  SLH GHL  +++L   Q  
Sbjct: 2   NLIEDLQYRGLMHQVTDEEGLKRLLEQEQVKLYCGFDPTGDSLHIGHLLTILMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP  L+GG T +IGDPS +   R +   + ++  +EKI+G    F+ +  G   A M 
Sbjct: 62  GHKPFPLVGGATGLIGDPSGKKAERTLNEQEVVEGFVEKIQGQLQRFLDFE-GANAAEMK 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+   D LR++G  FSVN ML+ +SV SR+  +  +SF EF Y ILQ+YDF +
Sbjct: 121 NNYDWLGSMTLTDFLRDVGKHFSVNYMLAKDSVESRI--QTGISFTEFTYQILQSYDFHK 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER------LKTPKLFALTSPLLTTASGTKMGKT 240
           L      +LQ+GGSDQWGNI  G++L  R       + P  +  T PL+T A G K GK+
Sbjct: 179 LYTEEQVKLQIGGSDQWGNITAGLELIRRLSGGEEGERPDAYGFTIPLVTKADGEKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
             GAIWL+ E TSPY F+Q+  N DD+DV+ F K  T L   EID       +     +A
Sbjct: 239 EGGAIWLDPEKTSPYEFYQFLLNTDDSDVIRFLKYFTFLEKQEIDALETEVQERPHERQA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG------- 351
           +K +A E+T  VH     +KA       F             ++ DEV  G         
Sbjct: 299 QKKLAEELTRFVHDEAALDKAQNITNALFGGGDLK------ELTADEVQEGFKDVPGFEV 352

Query: 352 ------LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                 LL ++V+A  A+S  +AR  +++ AI +N     + +  +   D        L 
Sbjct: 353 DQPDKLLLDVLVEAKVASSKRQAREDIQNGAIYLNGDRCQDLQKTLGEDDKIDGAFTVLR 412

Query: 406 FGKKNHIICH 415
            GKK   + H
Sbjct: 413 RGKKKFFLIH 422


>gi|163942790|ref|YP_001647674.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864987|gb|ABY46046.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 420

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|302387692|ref|YP_003823514.1| tyrosyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198320|gb|ADL05891.1| tyrosyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 407

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 170/408 (41%), Positives = 250/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYDELKARGLIAQVTNEEEISKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT ++GDPS R + R++M  + IQ N +  K   S FI +  G   ALM+N
Sbjct: 63  NKPIALIGGGTGMVGDPSGRSDLRQVMTVETIQHNCDCFKKQMSRFIDFSEG--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YID LRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q++DF EL
Sbjct: 121 NADWLLNLNYIDFLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSFDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FNRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGNKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T+P++F+QYWRNI DADV+   + LT LP+ +I+ M   +G ++NEAK+I+A E+T
Sbjct: 239 DPEKTTPFDFFQYWRNIADADVLKCLRMLTFLPIEQINEMDSWEGSQLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAE+A  +A   F    ++  MPT  + + + + G + +L ++ K+G A + +
Sbjct: 299 NLVHGEEEAERARESARALFTGG-NAADMPTCELEEADFTDGSIDILAILQKSGLAPTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR+++   + +    +S+ K           G + +  GKK  +  
Sbjct: 358 EARRNVEQGGVTVEGEAVSDGKAVFTKDQLSGDG-VVVKRGKKKFVRV 404


>gi|229135906|ref|ZP_04264669.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228647548|gb|EEL03620.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 420

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +     +   +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKNLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQATDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|255026892|ref|ZP_05298878.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 419

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 216/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDFE-GNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V           L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSEANLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + + 
Sbjct: 359 VTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 416


>gi|217964249|ref|YP_002349927.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|290893192|ref|ZP_06556179.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|254783615|sp|B8DHE4|SYY_LISMH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|217333519|gb|ACK39313.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|290557174|gb|EFD90701.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|307571183|emb|CAR84362.1| tyrS [Listeria monocytogenes L99]
          Length = 419

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 216/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V           L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSEANLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + + 
Sbjct: 359 VTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 416


>gi|229169791|ref|ZP_04297488.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613641|gb|EEK70769.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 420

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID   +         EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|254421077|ref|ZP_05034801.1| tyrosyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196187254|gb|EDX82230.1| tyrosyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 417

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 200/417 (47%), Positives = 271/417 (64%), Gaps = 4/417 (0%)

Query: 1   MPA--FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M    FKSDFL  L  RG+IHQI++P ELD   + GVV  YIG+D TA SLH G L Q+M
Sbjct: 1   MTDQAFKSDFLRTLQARGYIHQITHPVELDAAAADGVVAGYIGFDATAPSLHVGSLIQIM 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           +L  LQ+ G KPI LMGGGT+ +GDP+ +D SR  +  + IQ NI+ IK +F+ F+ +G 
Sbjct: 61  MLRRLQQAGGKPIVLMGGGTTKVGDPTGKDTSRPQLTEETIQSNIDSIKTVFAKFLTFGD 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
           G TDA+M+NN+ WL    YI  LR+ G+ F+VNRMLSF+SV+ RL+REQ ++FLEFNYM+
Sbjct: 121 GPTDAVMVNNDDWLSGYGYIQFLRDFGTHFTVNRMLSFDSVKLRLEREQPMTFLEFNYML 180

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           +Q+ DF+EL +     LQMGGSDQWGNI  G+DL  R+     F LT+PLLTTASG KMG
Sbjct: 181 MQSVDFLELNRALKVTLQMGGSDQWGNITSGVDLVRRVDQKAAFGLTTPLLTTASGGKMG 240

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           KT  GA+WLN E  SPY++WQ+WRN +DADV  F +  T L + +I     L+G  IN+A
Sbjct: 241 KTAQGAVWLNAEQLSPYDYWQFWRNAEDADVGRFMRLFTDLSLEQIAEYEALEGAAINDA 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           KK +A   TT++HG EEA KA  AA   F+    S  +PT+ +   EV  G  +  ++ K
Sbjct: 301 KKALADAATTLLHGAEEAAKARAAAETAFEKGQVSADLPTVELPVAEV-YGAMIAAVVTK 359

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG   S  EARR  +   +++N++ +++    +   D    G IKL+ GKK  ++  
Sbjct: 360 AGLTASNGEARRLAQGGGLRLNDAAVADGAQLLTQADL-KDGVIKLAAGKKKIVLVR 415


>gi|254828168|ref|ZP_05232855.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254898234|ref|ZP_05258158.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912273|ref|ZP_05262285.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936600|ref|ZP_05268297.1| tyrosyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|258600555|gb|EEW13880.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609197|gb|EEW21805.1| tyrosyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590252|gb|EFF98586.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 419

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 216/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V           L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSEANLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + + 
Sbjct: 359 VTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 416


>gi|229164039|ref|ZP_04291976.1| Tyrosyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619422|gb|EEK76311.1| Tyrosyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 419

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELDWRGAINQQTDEEGLRKLVEEKQISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELVVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFNSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|225024266|ref|ZP_03713458.1| hypothetical protein EIKCOROL_01139 [Eikenella corrodens ATCC
           23834]
 gi|224943291|gb|EEG24500.1| hypothetical protein EIKCOROL_01139 [Eikenella corrodens ATCC
           23834]
          Length = 433

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 155/431 (35%), Positives = 226/431 (52%), Gaps = 21/431 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I Q ++   L  L ++  +T Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MTASLIQDLQARGLIAQTTDIEALSTLLNEQKITLYCGFDPTADSLHIGHLLPVLALRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A
Sbjct: 61  QQAGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSFE-GENAA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAY 182
           +M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ+Y
Sbjct: 120 IMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDDVGISFTEFAYTLLQSY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  
Sbjct: 180 DFAELNKRHGAMLQIGGSDQWGNITNGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI--DRMAKLQGKEINEAKK 300
           GA+WLN + TSPY F+Q+W  + DADV  F K  T LP+ EI              EA++
Sbjct: 240 GAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLPIEEIGAIEAKDQASGTKPEAQR 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLT 354
           I+A E+T ++HG    + A       F            + +    +   EVS  + ++ 
Sbjct: 300 ILAEEMTRLIHGETALQAAQRITESLFAEDQSSLTESDFEQLALDGLPAFEVSGSLNVVE 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIK 403
            +VK G A+S  EAR  + S A+ +N                ++   +            
Sbjct: 360 ALVKTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTI 419

Query: 404 LSFGKKNHIIC 414
           +  GK+NH + 
Sbjct: 420 VRRGKRNHALL 430


>gi|257067000|ref|YP_003153256.1| tyrosyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798880|gb|ACV29535.1| tyrosyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 416

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 158/412 (38%), Positives = 248/412 (60%), Gaps = 7/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+  Q +N  EL  L  +  V  Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 11  NVFDELVDRGYYEQATNEEELKKLLKEESVKFYCGFDATADSLTVGHLIQIMVMMRMQNY 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT++IGDPS R + R++M  + I  N E     F  F+ +  G   A ML
Sbjct: 71  GHRPVALLGGGTTLIGDPSGRSDMRKVMTEEMIDHNAECFYNQFQRFLDFSEG--GATML 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL  + +++ LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF++
Sbjct: 129 NNKDWLLDLNFVEFLRDVGSEFLVNEMIKKDAYKNRMAAG-GLTFFEFSYMLLQSYDFLK 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           + +    +L+MGGSDQW NII G+DL ++ +  + + +T  LLTTA G KMGK+  GA+W
Sbjct: 188 MYREDGVKLEMGGSDQWSNIIGGVDLIKKHENGQAYGMTFSLLTTADGVKMGKSQKGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATE 305
           L+++ TSPY  +QY RN+DD DV  F  +LT LP  E  +  +     EIN+AK+I+A E
Sbjct: 248 LDEKKTSPYEMYQYMRNVDDRDVEKFLLQLTFLPTEECRKLGSAKDAAEINKAKEILAYE 307

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  +VHG+E+A++A  AA   F        MPT  I+K ++ +G+ +  L+ + G   S 
Sbjct: 308 VVKLVHGKEKADEAIAAAKALFTGKGDESAMPTTQIAKSDLPKGLLI--LMTETGLTKSN 365

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR +K   + IN+  +++  +++    F+    I +  GKKN     L 
Sbjct: 366 GEARRIIKQGGVSINDEKVADPSIEVTEDLFEDGR-IIIKKGKKNFHKVELI 416


>gi|228910908|ref|ZP_04074717.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228848859|gb|EEM93704.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 420

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 211/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLIEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    I              EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIGELAAKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|257466034|ref|ZP_05630345.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917191|ref|ZP_07913431.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691066|gb|EFS27901.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 402

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 175/412 (42%), Positives = 243/412 (58%), Gaps = 12/412 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MENVFHVLQERGYLKQFTHEEEIKALLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  G   A+
Sbjct: 61  KYGHRPIALIGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL  + YI+ +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF
Sbjct: 119 LANNADWLWDLNYIEFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L K Y C L++GG DQW N+I G++L  + +    FA+T  LLT   G KMGKT  GA
Sbjct: 177 LVLNKKYGCVLELGGDDQWSNMIAGVELIRKKEQKSAFAMTCTLLTNKEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+DDADV      LT +PM E+ R+   Q + INEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFVPMEEVRRLVSFQDERINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT M+HG EEA K+  AA   F        +P + +S      G  LL ++V+     +
Sbjct: 297 EITKMIHGEEEALKSQKAAEALFSGGADLTTVPKLEVSI-----GEELLNVLVENKVLKT 351

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI-ICH 415
            +E RR ++  A+ + N  +S+    I    F       L  GKK    +  
Sbjct: 352 KSEGRRLMQQGAMTLENEKMSDPAYVITGDSFSGD--ALLKLGKKKFYQLVR 401


>gi|120404269|ref|YP_954098.1| tyrosyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119957087|gb|ABM14092.1| tyrosyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 424

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 145/426 (34%), Positives = 226/426 (53%), Gaps = 13/426 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L  RG I Q ++   L    ++G VT Y G+D TA SLHAGHL  L+ L   
Sbjct: 1   MGTSILDELEWRGLIAQSTDRDALAEALAEGPVTVYSGFDPTAPSLHAGHLIPLLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP      R +  +  + +   +I+G    F+++    T A
Sbjct: 61  QQAGHRPIVLAGGATGMIGDPRDVG-ERTLNTADTVADWAGRIRGQLERFVEFDDSPTGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN +W   +  I+ LR++G  FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA D
Sbjct: 120 VVANNLSWTGELSAIEFLRDVGKHFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           +VEL + Y C LQ+GGSDQWGNII G+ L  +     + ALT+PL+T + G K GK+   
Sbjct: 179 YVELHQRYGCTLQVGGSDQWGNIIAGVRLVRQKAGASVHALTTPLVTDSEGKKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +      A++
Sbjct: 239 GSLWLDPEMTSPYAWYQYFINTADADVLPYLRWFTFLSADELVELEQATTERPHERAAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGL 352
            +A E+T +VHG         A+   F  +   +         +   S+++        +
Sbjct: 299 RLARELTNLVHGEAATAAVELASQALFGRAELGELDEPTLAAALREASVAQLAPGGPDSI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S   ARR +      +NN  I+ ++   +  DF     + L  GK+N  
Sbjct: 359 IDLLVASGLSASKGAARRTVAEGGAYVNNVKIATDEWIPQASDFLHDRWLVLRRGKRNIA 418

Query: 413 ICHLCG 418
                G
Sbjct: 419 GIERVG 424


>gi|229014257|ref|ZP_04171377.1| Tyrosyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747034|gb|EEL96917.1| Tyrosyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 420

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|226224199|ref|YP_002758306.1| tyrosyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254852220|ref|ZP_05241568.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300765976|ref|ZP_07075947.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|259517006|sp|C1KVP5|SYY_LISMC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225876661|emb|CAS05370.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605528|gb|EEW18136.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300513294|gb|EFK40370.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 419

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 216/418 (51%), Gaps = 13/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V           L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDTEANLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + + 
Sbjct: 359 VTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 416


>gi|254673167|emb|CBA08020.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325135621|gb|EGC58238.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 431

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 225/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A+S  EAR  + S A+ +N                ++   +  +         L  
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|229020309|ref|ZP_04177076.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026534|ref|ZP_04182885.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734760|gb|EEL85403.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228740981|gb|EEL91212.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 420

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTVQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLQKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFESSKEKKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVATDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|296119701|ref|ZP_06838259.1| tyrosine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967584|gb|EFG80851.1| tyrosine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 421

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 150/420 (35%), Positives = 225/420 (53%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +  Y+G+D T  SLHAGHL  +++L   Q+ 
Sbjct: 2   NIIDELQWRGLINQSTDIDALREAC-EQPIALYVGFDPTGDSLHAGHLVPMIMLRRFQEA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L GG T  IGDP      R M+   EI  N+E IK     F+ +  G   A+M+
Sbjct: 61  GHKPLALAGGATGFIGDPRDVG-ERSMLSQDEIDNNLEAIKKQLRQFVDFD-GDNPAIMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA DFV+
Sbjct: 119 NNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLETD-GISYTEFSYMLLQANDFVQ 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K  ALT PL+T A G K GK+  G  +
Sbjct: 178 LQRKYDCVLQVGGGDQWGNIVSGVDLNRRVDGVKAHALTCPLVTDAQGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E TS Y+++QY+ N  D+ V+ + +  T L   EI   AK   +      A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLNQEEIAEYAKAVEEEPFKRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    AA            D       +   ++++       G++ L
Sbjct: 298 QEMTNLVHGNEATQAVELAAQALFGRAELSDLDEKTLEGALSETNVAELGDDDSFGIVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     +NN  I ++       DF     + +  GKKN    H
Sbjct: 358 LVASGLADSKGAARRTIKEGGAYVNNQRIESDDWTPAEDDFLHGAWLVMRRGKKNFAGIH 417


>gi|285808432|gb|ADC35958.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 98]
          Length = 445

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 151/424 (35%), Positives = 236/424 (55%), Gaps = 15/424 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D  S    RG ++  +    +    + G VTAY G+D TASSLH G L Q+M L  LQK 
Sbjct: 2   DVFSEFEWRGVVYDAT--EGVREALATGSVTAYAGFDPTASSLHVGSLMQIMALARLQKY 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GGGT +IGDPS +   R +   +++  N++ I+   S F+ +      A ++
Sbjct: 60  GHSPIAVVGGGTGLIGDPSGKSAERTLQTPEQVDVNVQGIRAQLSRFLDFDAASNPARLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  ++ LR++G  F+VN +L+ ESV+ RL+ E  +S+ EF+Y++LQAYDF+E
Sbjct: 120 NNADWLTRLSAMEFLRDVGKHFTVNYILAKESVKRRLESEDGISYTEFSYLLLQAYDFLE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++C LQ+GGSDQWGNI  G DL  RL+  K   L SPL+TTASGTK GKT +G IW
Sbjct: 180 LHDRFNCTLQVGGSDQWGNITAGCDLIRRLRGVKAQGLVSPLVTTASGTKFGKTEAGTIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+   TSP+ F+Q+W N +D D + + K  T L  + I+          E   A++ +A 
Sbjct: 240 LDAGRTSPFRFYQFWLNTEDTDAIRYLKFFTDLDAAAIEELGRGMAVAPEARAAQRTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEVS-RGMGLL 353
           E+T +VHG    E+A   +   F   I            +  P+  +  DE +  GM ++
Sbjct: 300 EVTRIVHGPAHVERAERTSSVLFGEDIATLPLEDVLAVFEDAPSTEVHADEFAGEGMSMI 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+ +   A S +EARR ++S  + +NN  +S+ + ++   +        +  G++   +
Sbjct: 360 DLLARVQLAPSKSEARRLVQSGGVYVNNRRVSDSQARLTRAEALGGRLFIVRKGQRQQHL 419

Query: 414 CHLC 417
             + 
Sbjct: 420 VKMV 423


>gi|305681987|ref|ZP_07404791.1| tyrosine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305658460|gb|EFM47963.1| tyrosine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 418

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 229/421 (54%), Gaps = 16/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++  EL   C +  +T Y G+D T +SLHAGHL  L++L   Q  
Sbjct: 2   NIVDELLWRGLINQATDVDELRAAC-EQPITLYCGFDPTGASLHAGHLVPLIMLKRFQNA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ ++L GG T +IGDP      R M+  +EI  NI  I+    SFI Y  G   A+M+
Sbjct: 61  GHRVLTLAGGATGMIGDPRDVG-ERSMLSEEEIAHNIAAIQDQIRSFIDYTDG--KAIMV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+YD+V 
Sbjct: 118 NNADWLGKFSLIDYLRDLGKNFSLNTMLDRETVKRRLGSD-GISYTEFSYMLLQSYDYVH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 177 LNREYDCVLQIGGGDQWGNIVSGVDLNRRMNQTKVHGLTVPLVTDAQGQKFGKSTGGGKL 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E+TSPY+++QY+ N  D+ V+ + +  T L  +EI        +   + EA++ +A
Sbjct: 237 WLDPELTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQAEIAEYEVAVQERPHLREAQRRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG    E    AA   F  +  ++         +   ++++        ++ L
Sbjct: 297 QEMTTLVHGSAATEAVELAAQALFGRAELTELDEATLRGALQETTVAEIAPQDPRTIVDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +      +NN  IS+E  +    D      + L  GKK      
Sbjct: 357 LVASGLAASKGAARRTINEGGAYVNNQRISSEDWEPTADDLLYGTWLVLRRGKKTFAGAK 416

Query: 416 L 416
           +
Sbjct: 417 I 417


>gi|38233766|ref|NP_939533.1| tyrosyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81401476|sp|Q6NHG2|SYY_CORDI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|38200027|emb|CAE49696.1| tyrosyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 420

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 148/420 (35%), Positives = 222/420 (52%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q+ 
Sbjct: 2   NIIDELQWRGLINQSTDIDALREAC-EKPITLYCGFDPTGDSLHAGHLVPMIMLRRFQEA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GG T  IGDP      R M+    I+ N+E IK    SF+++  G + A+M+
Sbjct: 61  GHRPITLAGGATGFIGDPRDVG-ERSMLSQDTIEHNLESIKKQLRSFVRFD-GDSPAIMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  +D LR++G  FS+N ML  E+V+ RL+ +  +S+ EF+YM+LQA DFV+
Sbjct: 119 NNADWTMSMSVVDFLRDVGKNFSLNTMLDRETVKRRLETD-GISYTEFSYMLLQANDFVQ 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K  ALT PL+T A G K GK+  G  +
Sbjct: 178 LNREYDCVLQIGGGDQWGNIVSGVDLNRRVSGTKTHALTVPLVTDAQGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ E TS Y+++QY+ N  D+ V+ + +  T L   EI        +   +  A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAELETEVRERPHLRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG +       AA         +  D +     +    I +        ++ L
Sbjct: 298 QEMTDLVHGHDATVSVELAAQALFGRASLQDLDEATLDGALSETVIFEVPAGESPTIIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++ AG   S   ARR +K     +NN  I +E  Q           + L  GKKN     
Sbjct: 358 LIGAGLVDSKGAARRTIKEGGAYVNNERIESEDWQPTDDVLLHGAWLVLRKGKKNFAGVK 417


>gi|297621555|ref|YP_003709692.1| Tyrosyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376856|gb|ADI38686.1| Tyrosyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 427

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 152/425 (35%), Positives = 232/425 (54%), Gaps = 16/425 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+ L  L ERGFI  +++  +L     +  V  Y G+D T+ SLH G++  +M L W Q
Sbjct: 1   MSNLLETLRERGFIESVTH-DQLGDFL-EKQVHVYCGFDPTSDSLHLGNMVAIMGLAWFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH P  ++GG T +IGDPS + + R+++  +++  N+E I+  F   + +   K   +
Sbjct: 59  KFGHTPYVILGGATGMIGDPSGKSKERQLLDEKQLSRNVEGIRKNFHGILDFTLAKASPV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W     ++  LRE+G +F V+ MLS ESVR+RL+ E+ LSF EF+Y +LQ YDF
Sbjct: 119 VLNNYDWFRQFSFVQFLREVGKYFRVSTMLSKESVRTRLESEEGLSFTEFSYQLLQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L +N++  +Q+GGSDQWGNI  GIDL  R+   +++ LT PLLTT+ G K GK+  GA
Sbjct: 179 LYLNENHNVSVQIGGSDQWGNITAGIDLVRRVAGKEVYGLTMPLLTTSDGKKFGKSEEGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKI 301
           IWL+ +  SPY F+QY   + D DV+   K LT + M E    + M + +    N A+K 
Sbjct: 239 IWLSPDKLSPYQFYQYLVRVQDNDVIRLMKMLTFMEMDEIRKYESMMEREDYVPNTAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T MVHG +  + A                          MP+ +   +E+     
Sbjct: 299 LAAEVTQMVHGDQGLKTALKVTEAAKPGRETDLNAEVLESIAHDMPSETFKAEEIVNN-K 357

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++V  G   S  +ARR +++    +NN  ++ E       DF     I L+ GKKN 
Sbjct: 358 LIDVVVLTGLQESKGQARRLIRNGGCYLNNKKMTEENHVFTADDFVDGRLILLAVGKKNK 417

Query: 412 IICHL 416
            +  L
Sbjct: 418 KLIRL 422


>gi|312869291|ref|ZP_07729458.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095165|gb|EFQ53442.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 426

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 15/419 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L  +  V+ Y G D T  SLH GHL   ++L   Q  
Sbjct: 13  DILEDLEWRGAINQCTDLEGLRDLLKEKKVSLYCGTDPTGDSLHIGHLIPFIMLKRFQLA 72

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R++  ++++Q N E +            G  +  ++
Sbjct: 73  GHHPYILIGGGTGFIGDPSGRKSERQLQTAEQVQHNKEGLTKQMIKLF----GTENFDIV 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  I  +D LR+ G  F++N MLS E+V SRL  +  +SF EF+Y ILQ+ DF+ 
Sbjct: 129 DNYDWLSKISLLDFLRDYGKSFNINTMLSKEAVASRL--KNGISFTEFSYQILQSIDFLH 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L    D +LQ+GG+DQWGN+  G+DL   +    K F LT PL+  A GTK GKT  GAI
Sbjct: 187 LNNTKDIQLQIGGADQWGNLTNGVDLIHSKKPNEKAFGLTIPLMLKADGTKFGKTAGGAI 246

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+ + TSP+ F+Q+W N DD DVV + K  T L   EID          +  EA++ +A
Sbjct: 247 WLDPKKTSPFTFYQFWLNQDDRDVVKYLKYFTFLSHKEIDELAEKVKTEPQKREAQRRLA 306

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTLIV 357
            E+T  VHG +  E+A   +   F  +I       +      +   EV +  + ++  +V
Sbjct: 307 EEVTKFVHGEKAMEQAKKISEILFSGNIAELSTAELEQAFEKVPSVEVGKTPINIIDWLV 366

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +   TS  +AR  +K+ AI IN   +++E+  +   D      + +  GK+N+ +  +
Sbjct: 367 NSEIETSKRQAREDIKNGAITINGRKVNDEEFIVDPSDNFDGKYVVVRKGKRNYFLAKV 425


>gi|257452174|ref|ZP_05617473.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058717|ref|ZP_07923202.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684393|gb|EFS21228.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 402

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 175/412 (42%), Positives = 243/412 (58%), Gaps = 12/412 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +   +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MENVFHVLQERGYLKQFTHEEEIKALLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  G   A+
Sbjct: 61  KYGHRPIALIGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL  + YI+ +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF
Sbjct: 119 LANNADWLWDLNYIEFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L K Y C L++GG DQW N+I G++L  + +    FA+T  LLT   G KMGKT  GA
Sbjct: 177 LVLNKKYGCVLELGGDDQWSNMIAGVELIRKKEQKSAFAMTCTLLTNKEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+DDADV      LT +PM E+ R+   Q + INEAKK++A 
Sbjct: 237 LWLDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFVPMEEVRRLVSFQDERINEAKKVLAF 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT M+HG EEA K+  AA   F        +P + +S      G  LL ++V+     +
Sbjct: 297 EITKMIHGEEEALKSQKAAEALFSGGADLTTVPKLEVSI-----GEELLNVLVENKVLKT 351

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI-ICH 415
            +E RR ++  A+ + N  +S+    I    F       L  GKK    +  
Sbjct: 352 KSEGRRLMQQGAMTLENVKMSDPAYVITEDSFSGD--ALLKLGKKKFYQLVR 401


>gi|258648857|ref|ZP_05736326.1| tyrosine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850876|gb|EEX70745.1| tyrosine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 431

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 146/432 (33%), Positives = 226/432 (52%), Gaps = 25/432 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +HQ+    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q  
Sbjct: 2   NFVEELRWRGMLHQLMPGTE--ELIQKERVTAYVGIDPTADSLHIGHLCGVMMLRLFQHC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + +  NI  IK     F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLNEETLAHNINGIKKQLERFLDFNSDAPNAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+ +  +++ +R+IG   +VN M++ +SV+ RL       LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKNYSFLEFVRDIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L K  +C+LQMGGSDQWGNI  G +L  R      +++ALT PL+T A G K GKT 
Sbjct: 180 FLYLYKTKNCKLQMGGSDQWGNITTGSELIRRTLGPDNEVYALTCPLITKADGRKFGKTE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
           SG IWL+ E T+PY F+Q+W N+ D +   + K  T L   E++ +           + +
Sbjct: 240 SGNIWLDAERTTPYEFYQFWLNVSDEEAARYIKIFTLLGREEVEALIAEHSLDPGRRQLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDE 345
           + +  E+T MVHGREE EKA  A    F  +                   +P   +++ E
Sbjct: 300 RRLGEEVTVMVHGREEYEKALAATEILFGKATKESLLKLDEKTLLAVFSGVPHFEVARAE 359

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            + G   + L  +      S  E R+ ++   + +N   +S     I  +D      + +
Sbjct: 360 -AVGAKAVDLFAEKTQCFASKGEMRKLVQGGGVSLNKEKLSAFDKTITEEDLLDGKYLLV 418

Query: 405 SFGKKNHIICHL 416
             GKKN+ +  +
Sbjct: 419 QRGKKNYYLITV 430


>gi|229099524|ref|ZP_04230452.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228683820|gb|EEL37770.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 419

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 211/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR  G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRNYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+ SGA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSASGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDAEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
             E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 GEEMTKFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|83595896|gb|ABC25257.1| tyrosyl-tRNA synthetase [uncultured marine bacterium Ant4E12]
          Length = 435

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 148/422 (35%), Positives = 220/422 (52%), Gaps = 12/422 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L+ L  RG IH  ++  EL    + G VT Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 14  EILADLQARGLIHDTTDIEELGRQLAAGSVTLYCGFDPTADSLHVGNLIGLLTLRRFQMA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PISL GG T +IGDPS +   R ++    + EN+E I      F+ +  G   A +L
Sbjct: 74  GHRPISLAGGATGMIGDPSGKSSERNLLDDSGLAENLEGIVPQLRQFLDFD-GPCAAKLL 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   +  +D LR+IG   +VN+ML+ +SV++R+     +S+ EF+YM+LQ YD++ 
Sbjct: 133 DNRAWTVGVSVLDFLRDIGKHVTVNQMLAKDSVKNRMNDGDGISYTEFSYMLLQGYDYLW 192

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAI 245
           LA+N  C LQ+GGSDQWGNII GIDL  R       ALT PLLT   G+K GKT     I
Sbjct: 193 LAENEGCALQVGGSDQWGNIILGIDLIRRKLGKSAHALTWPLLTKPDGSKYGKTAGGETI 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+    SPY F+Q W  ++DA+V     +LT L + E+D +AK    +      ++ +A
Sbjct: 253 WLSANKMSPYRFYQSWIGVEDAEVKKLLLQLTFLSVDEVDSLAKAHESDPGSRIGQRTLA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--------RGMGLLTL 355
            E+T++VHG   AE A  A+   F        +   ++                + L+ L
Sbjct: 313 HELTSIVHGTLSAEAAVQASEVLFGKGTDPGSVSKSALEFVSTEVPSSVYATNDLALIDL 372

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +     S  +A+R     +I +N   + +    +  +DF     + L  GKKN  +  
Sbjct: 373 LTETSLVASKGDAKRAFAEGSIYVNGERVLDSTTMVTPEDFLHDQYLLLRRGKKNWHVVE 432

Query: 416 LC 417
           L 
Sbjct: 433 LS 434


>gi|229105682|ref|ZP_04236313.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228677730|gb|EEL31976.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 419

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 211/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDAEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
             E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 GEEMTKFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGKFIIIRKGKKNYSLVKL 418


>gi|295398237|ref|ZP_06808283.1| tyrosine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973587|gb|EFG49368.1| tyrosine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 421

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 214/422 (50%), Gaps = 13/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L        ++ Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIIEELEWRGAINQQTDEDGLKAYIKDNKISLYCGVDPTGDSLHIGHLIPFMVLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS + E R +   ++++EN  K+     +         D  M+
Sbjct: 62  GHRPVILIGGATGSIGDPSGKSEERNLQSMEQVEENARKLASQMENLF-LKEKDADFRMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  +D LR IG  F+VN M+  + V SRL  E  +SF EF+Y ILQ+ DF+ 
Sbjct: 121 NNYDWTKNLTLLDFLRNIGKRFNVNTMIKKDIVASRL--ETGISFTEFSYQILQSMDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +N D RLQ+GG+DQWGNI  G++L  +      + F LT PL+  + GTK GKT  GA
Sbjct: 179 LFENEDVRLQIGGADQWGNITSGLELIRKEAGADAEAFGLTIPLMLKSDGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N +DADVV + K  T L   EID          E  EA++ +
Sbjct: 239 IWLDPEKTSPYEFYQFWLNQNDADVVKYLKYFTFLNKEEIDALEEKVATQPEKREAQRRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+TT VHG+   + A T     F  +I       I      +        G  L   +
Sbjct: 299 AEEMTTFVHGQTGLQDAQTITEALFSGNIQDLSAKQIEQGFGNMPGSTMPKEGNNLAVWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V AG   S  ++R  + + AI IN   + +   +I   D      I +  GKK + +  +
Sbjct: 359 VDAGVEGSRRQSREDINNGAIYINGQRLQDVDYEISAADAIEGKYIVVRRGKKKYFLITI 418

Query: 417 CG 418
            G
Sbjct: 419 EG 420


>gi|332670182|ref|YP_004453190.1| tyrosyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339220|gb|AEE45803.1| tyrosyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 426

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 140/418 (33%), Positives = 222/418 (53%), Gaps = 10/418 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L+ RG + Q ++P  L      G V+ Y G+D TA SLH G+L Q++ +  LQ
Sbjct: 1   MTHILDELAWRGLVAQTTDPDALRAALDAGQVSLYCGFDPTAPSLHIGNLVQILTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P +L+GG T +IGDP      R +     +   +++I+      +++  G + A 
Sbjct: 61  DAGHRPFALVGGATGLIGDPKM-AGERTLNAPDVVAGWVDRIRRQIEPLLRFD-GPSAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID LR++G  F +  ML+ ++V  RL  +Q +SF EF+Y ILQ  D+
Sbjct: 119 MVNNLDWTAPMSAIDFLRDVGKHFRLGTMLAKDTVARRLHSDQGISFTEFSYQILQGMDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +   LQ GGSDQWGN++ G++L  +++   + ALT+PL+T A GTK GKT SG 
Sbjct: 179 LELHRRHGVTLQTGGSDQWGNLLSGVELVRKVEGTAVHALTTPLVTKADGTKFGKTESGT 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E+T+PY F+Q+W N DDADVVS+ K  T     EI+    A  Q     EA++ +
Sbjct: 239 VWLDPELTTPYAFYQFWLNADDADVVSYLKIFTFRTREEIEALAEAVEQRPAAREAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A ++T++VHGR  A+K   A+   F     +             +       G  ++ ++
Sbjct: 299 AHDVTSLVHGRTAADKVVEASQALFGRGSLADLDEATFAAAVAELPTAPGRAGDPVVDVL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +G  TS   ARR +      +NN  +  E   ++ +D        L  GK+   + 
Sbjct: 359 AASGIVTSKAAARRAIGEGGASVNNVRVEQEDAVLRPEDLLHGRWAVLRRGKRTLAVV 416


>gi|332971567|gb|EGK10517.1| tyrosine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 432

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 151/430 (35%), Positives = 229/430 (53%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  +  L  RG I Q ++  EL  L     +  Y G+D TA SLH GHL  +++L   Q
Sbjct: 1   MNALILDLQARGLIAQTTDINELSKLLDSEKIALYCGFDPTADSLHIGHLLPVLVLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDPSF+   R +   + +   +  I+     F+K+  G   A+
Sbjct: 61  NAGHTPVALVGGATGMIGDPSFKAVERSLNTPETVAGWVNSIRDQLKPFLKFD-GANPAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYD 183
           M NN  W  ++  +D LR+IG  FSVN ML+ ESV+ R+ + +Q +SF EF+Y +LQ YD
Sbjct: 120 MENNANWFGAMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K ++ +LQ+GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  G
Sbjct: 180 FAELNKRHNVQLQIGGSDQWGNITWGTETTRRLNQKSVHGMTLPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
           A+WL+ + TSPYNF+Q+W  + DADV  F K  T L + +ID +        +  EA++I
Sbjct: 240 AVWLDAKKTSPYNFYQFWLKVADADVYKFLKYFTFLTVEQIDEIEANDKASGKKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T ++HG    E A       F              +    +   EVS  + ++  
Sbjct: 300 LAKEMTRLIHGEAALEAAQRITQSLFSGDESGLTEQDYAQLALDGLPAFEVSGNLNVVEA 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKL 404
           +V+AG A S  EAR  ++S A+ IN + ++           ++K  +  +         +
Sbjct: 360 LVQAGLAQSNKEARGFVQSGAVLINGTAVAENNPNHAPEKPDDKFMLTDEHKRFGKYTIV 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 KRGKRNHALL 429


>gi|300725862|ref|ZP_07059326.1| tyrosine--tRNA ligase [Prevotella bryantii B14]
 gi|299776850|gb|EFI73396.1| tyrosine--tRNA ligase [Prevotella bryantii B14]
          Length = 432

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 143/435 (32%), Positives = 222/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + QI    E      + + +AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELKWRGMLAQIMPGTE--EYLMENMTSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  T    A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGTAPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQA 181
            M+NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQQRLNGTARDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   +NY  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GK
Sbjct: 179 YDFLYQYQNYGVRLQLGGNDQWGNMTTGTELIRRTLGSEAQAFCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           T SG +WL++  T+PY F+Q+W N+ D D   + K  T L    I+       Q      
Sbjct: 239 TESGNVWLDRNRTTPYAFYQFWLNVTDDDAERYIKIFTDLDQDTINALVEEHKQDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISISK 343
            ++ +A E+TTMVH +E+ + A  A+   F                +   + +P  +I K
Sbjct: 299 LQRRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDSLAQLDEATLNDVFKDVPHYTIDK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++  G   + L  + G     S +E R+ +K   + +N   ++     +  +D      
Sbjct: 359 SQL--GGTAVDLFNQEGMDIFPSKSEMRKLVKGGGVSLNKEKLTAFDQAVTAEDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQRGKKNYYLITV 431


>gi|300933445|ref|ZP_07148701.1| hypothetical protein CresD4_05200 [Corynebacterium resistens DSM
           45100]
          Length = 432

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 147/429 (34%), Positives = 226/429 (52%), Gaps = 17/429 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            + + + +  L  RG + Q +    L           Y+G+D T  SLHAGHL  L+LL 
Sbjct: 5   NSVRENLIDELEWRGLVAQSTELEALREQLD-KPTAVYVGFDPTGPSLHAGHLVPLLLLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GHKP +L GG T +IGDP      R M+  +++ +N+E+IKG   +F+++    T
Sbjct: 64  RFQLAGHKPFALAGGATGMIGDPRDVG-ERSMLTEEQVADNLERIKGQLRAFLRFEGDAT 122

Query: 122 -----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                 A ++NN  W   +  ID LR++G  FS+N MLS ++V+ RL+ +  +S+ EF+Y
Sbjct: 123 AEDVQGAKLVNNAEWTLKMSVIDFLRDLGKNFSLNTMLSRDTVKRRLEND-GISYTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA DFV L + +D R+Q GGSDQWGNI+ G+DL  RL    +  LT PL+T + G K
Sbjct: 182 MLLQANDFVHLRREHDVRVQAGGSDQWGNIVSGVDLNRRLDGESVHGLTVPLVTDSEGNK 241

Query: 237 MGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGK 293
            GK+  G  +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   EI+       +  
Sbjct: 242 FGKSTGGGKLWLDPEMTSPYSWYQYFFNSADADVIRYLRWFTFLGREEIERLEGEVAERP 301

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVS 347
              EA++++A E+T +VHG E   K   AA   F  +  +    +            +VS
Sbjct: 302 FKREAQRVLAQEMTKLVHGEEAVAKVELAAQALFGRAELADLDESTLAAALQETEVADVS 361

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ L+V +G  +S   ARR +      +NN  I + +     +D      + L  G
Sbjct: 362 ADATIVDLLVASGLESSKGAARRTVNEGGAYVNNVRIEDVEWVPGAEDMLHGSWLVLRKG 421

Query: 408 KKNHIICHL 416
           KK      +
Sbjct: 422 KKRFAGAKV 430


>gi|294674941|ref|YP_003575557.1| tyrosine--tRNA ligase [Prevotella ruminicola 23]
 gi|294473475|gb|ADE82864.1| tyrosine--tRNA ligase [Prevotella ruminicola 23]
          Length = 431

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 147/434 (33%), Positives = 229/434 (52%), Gaps = 26/434 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + Q+    E   L  + +VTAY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELKWRGMLAQMMPGTE--ELLQKEMVTAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
             GH+P+ L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ + +     A
Sbjct: 59  HCGHRPVILVGGATGMIGDPSGKSQERNLLNNETLYHNQECIKKQVAKFLDFESKEPNAA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQA 181
           LM+NN  W+    ++D  RE+G   +VN M++ ESV+ RL       LSF EF Y +LQ 
Sbjct: 119 LMVNNYDWMKDFTFLDFAREVGKHITVNYMMAKESVQQRLNGTARDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGK 239
           YDF+ L ++Y  +LQ+GG+DQWGN+  G +L  R    ++  FALT PL+T + G K GK
Sbjct: 179 YDFLYLYQHYGVKLQLGGNDQWGNMTTGTELIRRTLGNEVETFALTCPLITKSDGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL+   T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++     
Sbjct: 239 TESGNIWLDPVRTTPYKFYQFWLNVSDDDAERYIKIFTSLEKDVIDALIEEHKQDPGRRV 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            +K +A E+T +VH +E  + A  A+   F  S                   +P   ISK
Sbjct: 299 LQKRLAEEVTVLVHSKEALDTAIEASNILFGKSTKEGLEKLDEQTLLDVFDGVPQFEISK 358

Query: 344 DEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           D++  G   + L+   A    S  E R+ ++   + +N   I+++   I  +D      +
Sbjct: 359 DQL--GQPAIELLTTVAPVFPSKGEMRKMVQGGGVSLNKEKITDQNRAITAEDLIDGKYL 416

Query: 403 KLSFGKKNHIICHL 416
               GKKN+ +  +
Sbjct: 417 LAQKGKKNYYLLIV 430


>gi|228993787|ref|ZP_04153692.1| Tyrosyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228765998|gb|EEM14647.1| Tyrosyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 420

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDADGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYKEEGVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG     +A       F   I S     I     ++           ++  +
Sbjct: 299 AEEMTKFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|254557421|ref|YP_003063838.1| tyrosine--tRNA ligase [Lactobacillus plantarum JDM1]
 gi|254046348|gb|ACT63141.1| tyrosine--tRNA ligase [Lactobacillus plantarum JDM1]
          Length = 418

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 215/421 (51%), Gaps = 16/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDDLKWRGAINQQTDEAGLKELTENQSVSLYCGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  ++GGGT  IGDPS ++  R++    +++ N + +         +     +  ++
Sbjct: 62  GHHPYVVVGGGTGAIGDPSGKNSERKLQTMDQVKHNQDGLSAQMYKLFGHD---ENFSIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLDFLRDYGKLFSVNTMLNKEVVASRL--EVGISYTEFTYQILQSVDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +    +LQ+GG+DQWGNI  G DL  R      K + LT PLL  A GTK GKT  GA
Sbjct: 177 LYRAEHVQLQIGGADQWGNITAGTDLIHRLEGNDAKAYGLTIPLLLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WLN E TSPY F+Q+W N DD DVV + K  T L   EIDR         E  EA++ +
Sbjct: 237 VWLNPERTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDRLAETVKTAPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTLI 356
           A E+T  VHG++   +A       F   + S     I      +   +VS     ++  +
Sbjct: 297 AEEVTEFVHGKQAVVEAENITKALFTGDVQSLTADEIEQGFKGVPSADVSAEKQNIVLWL 356

Query: 357 VKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V A  F  S  +AR  +K+ AI+IN   +++ + +I      +   + +  GKK + +  
Sbjct: 357 VDATKFEPSRRQAREDIKNGAIRINGEKVTDVEAEIDPSAAFNGKFVIVRRGKKRYFLAR 416

Query: 416 L 416
           +
Sbjct: 417 V 417


>gi|75760562|ref|ZP_00740596.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74491958|gb|EAO55140.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 420

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYXWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLKKERIDELAAKVEVEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFHSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229062739|ref|ZP_04200044.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716499|gb|EEL68202.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 420

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T P+ F+Q+W N +D DV+ + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTKPFEFYQFWVNTNDRDVIKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|312880689|ref|ZP_07740489.1| tyrosyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783980|gb|EFQ24378.1| tyrosyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 427

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 151/429 (35%), Positives = 232/429 (54%), Gaps = 18/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K + L +LS RG I   S P EL  L  + +VT Y+G+D +A SLH G++  +M L
Sbjct: 1   MTERK-NALEVLSRRGLIEWCSQPEELSSLFEREMVTGYVGFDPSADSLHVGNMVPIMGL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+ GH+P++L+GGGT +IGDPS + + R+++  +++  N+  I+G    F+ +    
Sbjct: 60  AWLQRLGHRPMALVGGGTGLIGDPSGKTKERQLLSEEQVVHNMGCIRGQLERFLDFDRTP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMIL 179
             AL++NN  WL    YI+ LR+ G +FSVN M++ E +RSRL+  + S+++ E +YM+L
Sbjct: 120 NAALLVNNYDWLKKQGYIEFLRDTGKYFSVNYMINREYIRSRLEDPEKSITYTELSYMLL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA+DF  L +   C LQMGG+DQ GN+I GIDL  + +  + +A T PLL T+SG K GK
Sbjct: 180 QAFDFHHLYRTQGCLLQMGGNDQQGNLIAGIDLIRKKEGVQAYAATFPLLLTSSGQKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +  GA++L+ E TSPY F+Q+W N +DAD+    +  T     EI      +    E   
Sbjct: 240 SEQGAVYLSPERTSPYRFYQFWINTEDADLPKLLRMYTFWEDEEIGALLAEQAAAPERRT 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM-----------SIHSQHMPTISISKDEV 346
            +K +A + T  VHG E A++ A A+   F                   +PT  +  D  
Sbjct: 300 GQKRLAWDFTCRVHGEEVAKRVARASELLFGEFDLSRLDAQVLETLVDEIPTAPLPGDL- 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                L  L+ ++G   S  EA+R LK   +  N   +  E   ++  +      + L  
Sbjct: 359 --PRSLADLLAESGACPSKGEAKRLLKGGGVSCNGRKVEREDAAVEPSELLFDRYLFLRL 416

Query: 407 GKKNHIICH 415
           GKK   +  
Sbjct: 417 GKKRFHLLR 425


>gi|229916423|ref|YP_002885069.1| tyrosyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467852|gb|ACQ69624.1| tyrosyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 415

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 143/417 (34%), Positives = 222/417 (53%), Gaps = 13/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q+++   L     +   T Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   ELLKDLEFRGLVNQMTDEEGLKEQL-KQPTTLYTGFDPTADSLHIGHLLPILTLKRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I+L+GG T +IGDPS R + R +     ++   ++IK   S F+    G+    + 
Sbjct: 61  GHQVIALVGGATGMIGDPSGRSDERSLNTLDTVKLFSDRIKDQLSRFLPLE-GENPITIR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR+IG  F ++ ML+ +SV SR+  E  +S+ EF+YM+LQ+YDF++
Sbjct: 120 NNYEWTEEMSIIDFLRDIGKHFPISYMLAKDSVDSRM--ENGISYTEFSYMLLQSYDFLK 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  R     K F LT PL+T + G K GKT  GA+
Sbjct: 178 LYETEKCRLQVGGSDQWGNITAGLELIRRFGHSEKAFGLTVPLVTKSDGQKFGKTAGGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N+DDADV+ F K  T +   EI+       +  E   A++ +A
Sbjct: 238 WLDADKTSPYEFFQFWINVDDADVIKFIKYFTFMSHEEIEALATEVTEAPEKRVAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVK 358
            E+T +VHG    E+A       F   + S     +      + + E+     ++ L+V+
Sbjct: 298 EEMTKLVHGEAGLEQAERITKAFFSGDLTSLQPEDMEDAFKGMPQFELDGERNIVDLLVE 357

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 358 ANISPSKRQAREDVTNGAIYLNGEREQALDKVVTREDTL-GEFTIIRRGKKKYFVIR 413


>gi|91224114|ref|ZP_01259377.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91191025|gb|EAS77291.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 419

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 225/420 (53%), Gaps = 12/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   
Sbjct: 1   MTTPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ ++L+GG T +IGDPSF+   R +   + +   +  +       +         
Sbjct: 60  QDAGHQAVALIGGATGMIGDPSFKATERSLNSEEIVSGWVNDLSNQIQQLMNL-QLTKPM 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
           +M+NN  W+ +I  ID  R++G  FS+N M++ +SV+ RL+  +Q +SF EF+Y +LQ+Y
Sbjct: 119 IMVNNADWMKAINVIDFFRDVGKHFSINTMVNRDSVKQRLQRPDQGISFTEFSYALLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  
Sbjct: 179 DFAELNRRYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
           GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +           +A++
Sbjct: 239 GAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQTSQGKPQAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----GLLTL 355
           I+A E+T  VHG E    A       F  ++    +  +   + +    +      L+ L
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQDLVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V++G A+S   AR H+ +NAI +N   +S +   +    F       L  GKK+  +  
Sbjct: 359 LVESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLF--DQYWLLQRGKKHFCLVK 416


>gi|229817939|ref|ZP_04448221.1| hypothetical protein BIFANG_03226 [Bifidobacterium angulatum DSM
           20098]
 gi|229784543|gb|EEP20657.1| hypothetical protein BIFANG_03226 [Bifidobacterium angulatum DSM
           20098]
          Length = 440

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 136/428 (31%), Positives = 212/428 (49%), Gaps = 20/428 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG + Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ 
Sbjct: 13  SSLLEELQWRGLVSQSTDRERLAQALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQL 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP  +   R +     +    E++K      +    G      
Sbjct: 73  AGHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWAERLKKQIGGILDTE-GSNPVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+
Sbjct: 191 HLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+  M SPY F+Q+W N  DA++ S  K  T LP SEI+R            EA+K +A
Sbjct: 251 WLDATMLSPYKFYQFWINRPDAEMESLLKAFTFLPKSEIERLIEESKTNPGAREAQKTLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD----------------EVS 347
            E+T+ VHG +  + A  A+   F        +   ++                   +  
Sbjct: 311 WEVTSFVHGEQATQAAIDASTALFGRGGDLNAIDEQTLESVLDGFKVAGENGEHVFPQSE 370

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  ++     AG   S +EARR +KS  + +NN  + +++  +   DF +     +  G
Sbjct: 371 AGARVIDAAQAAGLFKSGSEARRAIKSGGVYLNNVRVEDDEAVLGESDFLAGRFALIRRG 430

Query: 408 KKNHIICH 415
           KK   +  
Sbjct: 431 KKALGVVE 438


>gi|237785437|ref|YP_002906142.1| Tyrosyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758349|gb|ACR17599.1| Tyrosyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 444

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 147/427 (34%), Positives = 226/427 (52%), Gaps = 18/427 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  ++  +  L  RG I+Q ++   L      G++T Y G+D T  SLHAGHL  L++L 
Sbjct: 13  PDARAAVIEDLQWRGLINQSTDLDLLKQAARDGMLTLYTGFDPTGPSLHAGHLVPLLMLK 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG---- 117
             Q+ GH+PI L GG T +IGDP      R M+ +  + E  E I      F+ +     
Sbjct: 73  RFQQAGHRPIVLAGGATGMIGDPREVG-ERAMLAADTVSEWAENISSQLRRFVSFEGDPD 131

Query: 118 -TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
            +G   A++ NN TW   +  I+ LR++G  FS+N MLS ++V+ RL+ +  +S+ EF+Y
Sbjct: 132 FSGNNGAILENNYTWTSQMSAIEYLRDLGKNFSLNTMLSRDTVKRRLEGD-GISYTEFSY 190

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA DFVEL + YDCR+Q+GGSDQWGNI+ G+DL  R+    +  +T PL+T + G K
Sbjct: 191 MLLQANDFVELRRRYDCRVQIGGSDQWGNIVGGVDLNRRVDNEVVHGITVPLVTDSEGKK 250

Query: 237 MGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGK 293
            GK+  G  +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+        +  
Sbjct: 251 FGKSTGGGKLWLDPEMTSPYSWYQYFLNSADADVIRYLRWFTFLDREELKDLETETQERP 310

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDE 345
               A+K +A E+TT+VHG E  +    A+   F                +    I++  
Sbjct: 311 HKRAAQKRLAQEMTTLVHGAEATKSVELASQALFGRGELRDLDSSTLKGALSETEIAEFP 370

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                 ++ L+V++  A S   ARR +K     +NN  +S+     +  D      + L 
Sbjct: 371 QGAEPTIVDLLVESKLAPSKGAARRTVKEGGAYVNNERVSDMDWIPRADDLLHGQWLVLR 430

Query: 406 FGKKNHI 412
            GKK+  
Sbjct: 431 RGKKSFA 437


>gi|297181532|gb|ADI17718.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_25G24]
          Length = 427

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 150/426 (35%), Positives = 235/426 (55%), Gaps = 10/426 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D +S L  R  I Q++   +L    + G    Y G+D TA SLH G +  L++L
Sbjct: 1   MGTKYEDIISELENRDLIAQLAGEDKLKEHIAAGKRAVYCGFDPTAESLHIGSVVPLLVL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T +IGDPSF+   R++  S  ++E +E++K   S F+ +  G 
Sbjct: 61  RRFQLAGHKPIALVGGATGLIGDPSFKSAERQLNPSNVVEEWVERLKPQLSQFLDFDCGT 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A+++NN  W  +   +  LR++G  FSVN M+  +SVR R++RE + +S+ EF+YM+L
Sbjct: 121 NSAVLVNNLEWTQNRDLLSFLRDVGKHFSVNSMVQKDSVRQRIEREGEGISYTEFSYMLL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+ DF EL K +DC +Q+GGSDQWGNI  GIDL  R+   ++F +T+PL+T A GTK GK
Sbjct: 181 QSLDFAELHKRFDCSIQVGGSDQWGNITGGIDLTRRIYQKQVFGVTTPLVTKADGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
           T  G IW++   TSPY  +Q+W N+ D DV  + +  T L + EI  +       +   E
Sbjct: 241 TEKGTIWISANKTSPYALYQFWLNVSDLDVYKYLRYFTFLSIEEIQEIELSDKSSQSKPE 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRG-M 350
           A+ I+A+E+T ++HG E    A   +   F   I        + +    + K   + G +
Sbjct: 301 AQSILASEVTKLLHGGEGLTAAKRISDSLFSGDISKLTRDDLKQLDLDGLPKTSFAGGQV 360

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ ++V+   A S   AR  + +NAI +N S++ +  L +   +    G   L  GKK 
Sbjct: 361 DIIQVLVRTELAKSNKMAREFIGNNAISVNGSLVHSGDLILDASNALEGGYFVLRRGKKM 420

Query: 411 HIICHL 416
             +  +
Sbjct: 421 FHLVKV 426


>gi|118469309|ref|YP_888052.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170596|gb|ABK71492.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 440

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 145/425 (34%), Positives = 224/425 (52%), Gaps = 18/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L  RG I Q ++   L    ++G +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 10  TGILDELDWRGLIAQSTDREALASDLAKGPMTVYSGFDPTAPSLHAGHLVPLLTLRRFQQ 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP      R M     + +  ++I+G    F+++    T A++
Sbjct: 70  AGHRPIVLAGGATGMIGDPRD-TGERTMNTEDTVADWADRIRGQLERFVEFDDSPTGAIV 128

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN TW   +  I  LR+IG +FSVN ML  E+VR RL+ +  +S+ EF+YM+LQA D+V
Sbjct: 129 ENNLTWTGELSAISFLRDIGKYFSVNVMLDRETVRRRLEGD-GISYTEFSYMLLQANDYV 187

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGA 244
           EL + + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+   G 
Sbjct: 188 ELHQRHGCALQVGGSDQWGNIVAGVRLVRQKIGATVHAMTTPLVTDSEGKKFGKSTGGGN 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+     A         A++ +
Sbjct: 248 LWLDPEMTSPYAWYQYFVNTADADVLGYLRWFTFLTPDELAELADATENRPHERAAQRRL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------------M 350
           A E+TT+VHG    +    A+   F        +   ++S      G             
Sbjct: 308 ARELTTLVHGEGATKSVEYASRALFGRGEL-ADLDESTLSAALREAGNGQVAELAPGGPD 366

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L+V  G + S   ARR +    + +NN+ + +++   +  DF   G + L  GK++
Sbjct: 367 SIVDLLVATGLSNSKGAARRTVAEGGVYVNNARVESDEWVPQESDFLHEGWLVLRRGKRH 426

Query: 411 HIICH 415
                
Sbjct: 427 IAGVR 431


>gi|332885512|gb|EGK05761.1| tyrosyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 430

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 228/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH+I    E      + + + Y+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHEIMPGTE--EQLQKELTSGYVGIDPTADSLHIGHLVGVMILKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N E +K   + F+ +       AL+
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERNLLDEATLRHNQESLKKQLAKFLDFESDKPNAALL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M+S +SV+ RL     + +SF EF+Y ++Q YD
Sbjct: 120 VNNYDWMKDFSFLNFIRDIGKHITVNYMMSKDSVKKRLNGESSEGMSFTEFSYQLMQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CR+QMGGSDQWGNI  G +L  R    + FAL  PL+T A GTK GKT SG
Sbjct: 180 FLHLYQTLGCRIQMGGSDQWGNITTGTELIRRKAGGEAFALVCPLITKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ D D   + K  T L   EI+   + +     +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDEDAEKYIKIFTALDKEEIEGLVVEQKAAPHLRALQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVS 347
           +A EIT MVH  E+  +A  A+   F  +                 + +PT  ISKDE++
Sbjct: 300 LAKEITIMVHSEEDYNQAVEASNILFGNATADALKKLDEETFLQVFEGVPTFDISKDELA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L+ + A    S  E R+ +++  + IN   + N    I      +   I    
Sbjct: 360 AGIKAVDLLTEKAAVFPSKGEMRKTVQAGGVMINKEKLENFDDAIDASSLIAEKYIIAQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|224013912|ref|XP_002296620.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968972|gb|EED87316.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 418

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 185/417 (44%), Positives = 266/417 (63%), Gaps = 12/417 (2%)

Query: 12  LSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +RGF+ Q +N  ELD L          V+AY+G+D TA SLH G L Q+M+L  LQ++
Sbjct: 1   MRDRGFLFQCTNLSELDALLTEATSKNEAVSAYLGFDATADSLHVGSLLQIMILRHLQQS 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALM 125
           GH+PI L+GGGTS +GDP+ +DESR M+    I++N + I  +F  F+ +G     +A+M
Sbjct: 61  GHRPIVLIGGGTSKVGDPTGKDESRIMLNDDIIKKNTDGISQVFQKFLTFGEKSVEEAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN+ WL  +KY+  LR+ G+ F++NRM+SFESV+ RL RE   SFLEFNYMILQAYDF+
Sbjct: 121 VNNDEWLSDLKYLQFLRDYGTHFTINRMMSFESVKQRLAREAPFSFLEFNYMILQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+ +LQ+GGSDQWGN+I G +LG R+   +L+ALT+PL+TT+ G KMGKT  GA+
Sbjct: 181 ELNRRYNAQLQLGGSDQWGNMISGCELGRRVDGKQLYALTAPLITTSDGKKMGKTAGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WLN +  S Y++WQ+WRN  D DV+ F K  T L + EI++MA+ QG +IN+AK ++A E
Sbjct: 241 WLNADKLSEYDYWQFWRNTSDEDVIRFLKLFTELSLEEIEKMAEWQGADINKAKVVLADE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMS----IHSQHMPTISISKDEVS--RGMGLLTLIVKA 359
            T ++HGRE            F         ++ +  I +S+DE++   G+ ++ L VK 
Sbjct: 301 ATALLHGRECLAAIHDTIDTMFKGGKSAEASTEGLARIFVSEDELNAKDGVKVIDLFVKL 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G A+S  EARR ++    K+    I +E   I   DFD    + L  GKK   +  L
Sbjct: 361 GLASSKKEARRLVQGGGAKLGEEKIEDEFAVIAKDDFDEKNELTLRAGKKRAGVVEL 417


>gi|291010100|ref|ZP_06568073.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 424

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 224/424 (52%), Gaps = 13/424 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
                L  LS RG I Q ++   L      G +T Y G+D TA SLHAGHL  ++ L   
Sbjct: 1   MSEHILDDLSWRGLIAQSTDLDTLRSDLDAGPLTLYAGFDPTAPSLHAGHLIPILTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+P+ L GG T +IGDP      R +  +  + E  E+I+   S+F+ +    T A
Sbjct: 61  QQAGHRPVVLAGGATGLIGDPRDVG-ERNLHDADTVVEWTERIRRQLSAFVDFDDTPTGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M NN  W   +     LR+IG  FSVN ML+ E+VR RL+ +  +S+ EF+YM+LQA D
Sbjct: 120 IMANNADWTADLPVTAFLRDIGKHFSVNTMLARETVRRRLETD-GISYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           +VEL + +   LQ+GGSDQWGNII G+DL  +     + ALT PL+T A G K GK+   
Sbjct: 179 YVELHRRHGTSLQLGGSDQWGNIIAGVDLVRKQNGAAVHALTLPLVTDAEGRKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKK 300
           G +WL+  MTSPY ++QY+ N  DADV  + +  T L   EI+ + +   +  ++   ++
Sbjct: 239 GNVWLDPAMTSPYAWYQYFVNAADADVAKYLRLFTFLSREEIEELERTTAEKPQLRAGQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGL 352
            +A E+TT+VHG ++  +  TA+   F                M  +   + ++S G  +
Sbjct: 299 RLAEELTTLVHGEQQTRQVVTASQALFGRGELRDLDESTLDAAMAEVPTGEVDLSDGPTI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V+ G       ARR +      +NNS I++E      +D      + +  GK++  
Sbjct: 359 VELLVETGLVAGRGAARRTVNEGGAYVNNSKIADETWSPSKEDLLHGRWLVVRRGKRHTA 418

Query: 413 ICHL 416
              +
Sbjct: 419 GVKV 422


>gi|189502000|ref|YP_001957717.1| hypothetical protein Aasi_0587 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|259516964|sp|B3ERY6|SYY_AMOA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189497441|gb|ACE05988.1| hypothetical protein Aasi_0587 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 427

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 148/432 (34%), Positives = 224/432 (51%), Gaps = 24/432 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             DF++ L  RG IH I+    L+    + ++T YIG+D TA SLH G+L  +MLL   Q
Sbjct: 1   MYDFIANLRWRGMIHDITP--GLEAQLQKEMITGYIGFDPTAPSLHVGNLATIMLLKHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKPI+++GG T +IGDPSF+   R+ +  +E+  N   I      F+ + +    A 
Sbjct: 59  LAGHKPIAVVGGATGMIGDPSFKSTERKFLSEEELLHNQSCIMKQLKCFLDFSSSANTAE 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W     ++  LRE+G   S+N M++ ESV+ RL  E  +SF EF+Y +LQ YDF
Sbjct: 119 LLNNIDWFKDFGFLRFLREVGKHISINYMMAKESVKRRL--EDGISFTEFSYQLLQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L      +LQMGG+DQWGN+  GI+L  R    + FALT+PL+T A GTK GK+  G 
Sbjct: 177 YYLYNTKGVKLQMGGADQWGNLTTGIELIRRKTGEEAFALTAPLITKADGTKFGKSEQGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           IWL+  MTSPY F+Q+W N  D D     K  T L   EID + +L  +       +K I
Sbjct: 237 IWLDSTMTSPYEFYQFWLNCTDEDACRLIKVFTLLSKEEIDNLIELHVQAPHQRILQKQI 296

Query: 303 ATEITTMVHGREEAEKAATAAM--------------ECFDMSIHSQHMPTISISKDEVSR 348
           A E+T  VH   +  +A   +                  D  +  + +P + I+  +++ 
Sbjct: 297 AKELTIRVHSETDYMQARKTSELLFGHATAEDLWELSEKDFKVIFKSIPEVHITLTQLTE 356

Query: 349 GMGLLTLIVKAGF---ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              +L L+   GF     S  E RR ++  ++ +N   I++   +  L+       + + 
Sbjct: 357 AEHMLDLVASTGFGIMFNSKGEVRRAIQEGSLSVNKEKITDPLQKPNLK-LLQDKYLLVQ 415

Query: 406 FGKKNHIICHLC 417
            GKK+H +  + 
Sbjct: 416 RGKKHHYLIKVS 427


>gi|257457309|ref|ZP_05622480.1| tyrosyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257445231|gb|EEV20303.1| tyrosyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 406

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 173/410 (42%), Positives = 244/410 (59%), Gaps = 7/410 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L +RGF  Q ++   L  L  +G VT YIG D T  SLH GHL     L  L+
Sbjct: 1   MNKALQTLIDRGFFQQCTDVEALSALMDKGPVTFYIGTDPTGGSLHIGHLVPQFALRHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I+L+GGGT  IGDPS + E R+M+  +++ EN+EKIK     FI +      A 
Sbjct: 61  DAGHIGIALLGGGTGRIGDPSGKTEMRKMLDYRQLDENVEKIKAQLDRFIGFD--GKTAF 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             NN+ WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF
Sbjct: 119 PENNKNWLADLNYIDFLRDIGSCFSVNKMLSFEAYKIRM--ETGLSFLEFNYQLLQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + + C LQ+GG DQWGNI+ G+DL  R    ++F LT PL+T + G KMGK+  GA
Sbjct: 177 LMLHQKHHCCLQIGGDDQWGNIVAGVDLVRRKTGDEVFGLTFPLITRSDGKKMGKSEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+KEMT  ++F+QYWRN+DDADV  F    T LP+ EIDR+       INEAK+ +A 
Sbjct: 237 LFLDKEMTPVFDFFQYWRNVDDADVRRFMLLFTFLPIEEIDRIC---AGNINEAKERLAW 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T  +HG++EA+ A   A   F        MPT+ +++    +G+ ++ L V++G   +
Sbjct: 294 EVTKEIHGKDEADTALAGAKAAFGGGGDKSAMPTVEMNRAVFEQGIPVVDLFVQSGLCAT 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++ARR ++          +++ K  I     D TG + L  GKK  I  
Sbjct: 354 KSDARRLIEQGGALAAGQPVTDFKAVITAAVLDKTGELILRAGKKRFIRI 403


>gi|163791165|ref|ZP_02185583.1| tyrosyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873560|gb|EDP67646.1| tyrosyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 421

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 217/426 (50%), Gaps = 21/426 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  Q  V  Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDEVGLKKLIDQKAVGLYCGVDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GG T  IGDPS + E R +  S+++Q N++K+          G  +    M+
Sbjct: 62  GHRPVIVIGGATGSIGDPSGKSEERVLQTSEQVQNNVDKLTHQMEKLFDAGKNENSIRMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  +D LR IG  F+VN MLS + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNLDWTKEISLLDFLRNIGKSFNVNTMLSKDIVASRL--ETGISFTEFTYQILQSIDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GG+DQWGNI  G++   + +    + + LT PL+  A GTK GKT  GA
Sbjct: 180 LYQHEDVQLQIGGADQWGNITAGLEYIRKQEGSEAEAYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ E T+PY F+Q+W N DD DVV + K  T L   EID             EA+K +
Sbjct: 240 IWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLTKEEIDALAEKIATEPHKREAQKTL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGMGL 352
           A+E+T  VHG +  + A       F                ++MPT    K+E      +
Sbjct: 300 ASEMTLFVHGEQALKDAEKITAALFSGDVKSLTADQIEEGFKNMPTFEAPKEE----KNI 355

Query: 353 LTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  +V   G   S  +AR  +K+ A+ +N   +++ +  +  ++      I +  GKK +
Sbjct: 356 VEWLVDVVGIEPSRRQAREDIKNGALSMNGEKVTDVEAIVTPENSFDERFILIRKGKKKY 415

Query: 412 IICHLC 417
            +  L 
Sbjct: 416 FLVKLV 421


>gi|269961889|ref|ZP_06176246.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833467|gb|EEZ87569.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 418

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 150/416 (36%), Positives = 223/416 (53%), Gaps = 12/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q S+  ++  L S    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 3   LIEDLQARGLIAQASDLDQVQQLLS-EPQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +   + +   ++ +       +         +M+N
Sbjct: 62  HQAIALIGGATGMIGDPSFKATERSLNSEETVAGWVQDLSNQIQQLM-NNQVSKPMIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R++G  FSVN M+S ESV+ RL+  +Q +SF EF+Y +LQ+YDF E
Sbjct: 121 NADWVKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 181 LNRQHGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W + +DADV  F +  T L   EI  +     + K   +A++I+A 
Sbjct: 241 LDPSKTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAIEAQDKESKGKPQAQRILAE 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKDEV----SRGMGLLTLIVKA 359
           ++T  VHG E    A       F  ++    +  +  +  D +    S    L+ L+V++
Sbjct: 301 QMTRFVHGEEGLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLVES 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S   AR  + +NAI +N   +  E   +    F       L  GKK+  +  
Sbjct: 361 GLANSKRIARELIGNNAISVNGEKVDAENPSLNFPLF--DQYWLLQRGKKHFYLVK 414


>gi|42526373|ref|NP_971471.1| tyrosyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81570312|sp|Q73PD8|SYY_TREDE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|41816485|gb|AAS11352.1| tyrosyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 406

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 170/410 (41%), Positives = 244/410 (59%), Gaps = 7/410 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L IL ERGFI Q ++ + L     +G +  Y G D T  SLH GH+  +  L  L 
Sbjct: 1   MNKALKILQERGFIQQCTDLQALSDRMDKGQIAFYTGTDPTGPSLHIGHMVPIFALKHLC 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHK + L+GGGTS IGDPS + E R+M+   E+ +N   I+     F+       +  
Sbjct: 61  REGHKGVVLVGGGTSRIGDPSGKTEMRKMLSYDELDKNAASIQKQIEKFLAKDI--KNVR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN+ WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF
Sbjct: 119 FVNNKDWLADLNYIDFLRDIGSHFSVNKMLSFEAYKKRM--ETGLSFLEFNYQLLQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L +NY+  LQ+GG DQWGN++ G DL  R    ++FALT  L+T A G KMGK+  GA
Sbjct: 177 LMLNQNYNIELQIGGDDQWGNMVAGSDLIRRKGGGEVFALTFSLVTRADGQKMGKSEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           I+L+  + SPY+F+QYWRN  DADV  F    T L + EI  +      +IN+AK+ +A 
Sbjct: 237 IFLDTALVSPYDFFQYWRNTADADVEKFMLLFTFLSIEEIKSVC---AGDINKAKERLAF 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG+EEAEKA   A   F    +   MPT ++S  +++ G+G++ L  +AG A++
Sbjct: 294 EVTALIHGKEEAEKALEGARAAFSGGGNKDAMPTANLSLSKLNEGIGIIDLFAEAGLAST 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++ARR ++     IN   IS+ K  I  +  D    + L  GKK  +  
Sbjct: 354 KSDARRLVEQGGAFINEEKISDIKALIGKEKLDKDNEMILRAGKKRFMRI 403


>gi|294628647|ref|ZP_06707207.1| tyrosyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292831980|gb|EFF90329.1| tyrosyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 422

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 136/423 (32%), Positives = 215/423 (50%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFALSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T +IGDP      R +   + +   +EK++     F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGLIGDPRP-TAERTLNDPETVAGWVEKLRRQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ +Q +S+ EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESDQGISYTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + + C LQ GGSDQWGN+  G+DL  R      + AL +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRHGCTLQQGGSDQWGNLTAGLDLIHRLEPDASVHALATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+  + + L+        +   + + +    A +  
Sbjct: 239 AVWLDAEMTTPYAFYQFWLNVDDRDISKYLRILSFRSREELEELERQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSRGMGLLTL 355
             E  T +    +   A  AA +          +           +   +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASKALFGQGELAELDERTLAAALSEVPHVQVAELGQVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNVKVTAEDAVPAREDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|229007390|ref|ZP_04164987.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228753778|gb|EEM03219.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 420

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDADGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYKEEGVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG     +A       F   I S     I     ++           ++  +
Sbjct: 299 AEEMTKFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDERFIIIRKGKKNYSLVKL 418


>gi|134101758|ref|YP_001107419.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133914381|emb|CAM04494.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 433

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 224/420 (53%), Gaps = 13/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L      G +T Y G+D TA SLHAGHL  ++ L   Q+ G
Sbjct: 14  ILDDLSWRGLIAQSTDLDTLRSDLDAGPLTLYAGFDPTAPSLHAGHLIPILTLRRFQQAG 73

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L GG T +IGDP      R +  +  + E  E+I+   S+F+ +    T A+M N
Sbjct: 74  HRPVVLAGGATGLIGDPRDVG-ERNLHDADTVVEWTERIRRQLSAFVDFDDTPTGAIMAN 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +     LR+IG  FSVN ML+ E+VR RL+ +  +S+ EF+YM+LQA D+VEL
Sbjct: 133 NADWTADLPVTAFLRDIGKHFSVNTMLARETVRRRLETD-GISYTEFSYMLLQANDYVEL 191

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAIW 246
            + +   LQ+GGSDQWGNII G+DL  +     + ALT PL+T A G K GK+   G +W
Sbjct: 192 HRRHGTSLQLGGSDQWGNIIAGVDLVRKQNGAAVHALTLPLVTDAEGRKFGKSTGGGNVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+  MTSPY ++QY+ N  DADV  + +  T L   EI+ + +   +  ++   ++ +A 
Sbjct: 252 LDPAMTSPYAWYQYFVNAADADVAKYLRLFTFLSREEIEELERTTAEKPQLRAGQRRLAE 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLI 356
           E+TT+VHG ++  +  TA+   F                M  +   + ++S G  ++ L+
Sbjct: 312 ELTTLVHGEQQTRQVVTASQALFGRGELRDLDESTLDAAMAEVPTGEVDLSDGPTIVELL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G       ARR +      +NNS I++E      +D      + +  GK++     +
Sbjct: 372 VETGLVAGRGAARRTVNEGGAYVNNSKIADETWSPSKEDLLHGRWLVVRRGKRHTAGVKV 431


>gi|282879066|ref|ZP_06287826.1| tyrosine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281298800|gb|EFA91209.1| tyrosine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 433

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 142/436 (32%), Positives = 220/436 (50%), Gaps = 27/436 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + Q+    E   L  + +V+AY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MTKNFVEELKWRGMLAQMMPGTE--ELLEKELVSAYLGTDPTADSLHIGHLCGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q+ GHKP  L+GG T +IGDPS +   R ++ +  +  N E IK   S F+ +       
Sbjct: 59  QRCGHKPYLLLGGATGMIGDPSGKSLERNLLDTDTLYHNQEAIKQQVSKFLDFDGDTPNK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A ++NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ
Sbjct: 119 AELVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
            YDF+ L + +  +LQ+GG+DQWGN+  G +L  R    +   + LT PL+T A G K G
Sbjct: 179 GYDFLHLYQKHGIKLQLGGNDQWGNMTTGTELIRRTLGAEENAYCLTCPLITKADGKKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           KT +G IWL++  T+PY F+Q+W N+ D D   + K  T+L    I+       Q     
Sbjct: 239 KTENGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLERETIEALVAEHQQDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISIS 342
             +K +A E+T MVH +E+ + A  A+   F  +                   +P   I 
Sbjct: 299 VLQKRLAEEVTVMVHSQEDLDMAIEASNILFGKATKESLRKLDEATFLDVFNGVPQYEID 358

Query: 343 KDEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           K+++  G   + L  + G     S  E R+ +K   + +N   +S+    I   D     
Sbjct: 359 KNQL--GSTAVDLFNQEGMEMFPSKGEMRKLVKGGGVSLNKEKLSSFDQVITADDLIDGK 416

Query: 401 NIKLSFGKKNHIICHL 416
            + +  GKKN+ +  +
Sbjct: 417 YLLVQRGKKNYFLITV 432


>gi|315282536|ref|ZP_07870926.1| tyrosyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613817|gb|EFR87571.1| tyrosyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 429

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 153/421 (36%), Positives = 217/421 (51%), Gaps = 13/421 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   
Sbjct: 9   IEMNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDFE-GDSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK       +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIAELAKQVETEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLL 353
           K +A E+T  VH  E  E+A   +   F   + +     I     +V         + L+
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDAEVNLV 365

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V  G   S  +AR  + + AI IN     N +  +   D        +  GKK + +
Sbjct: 366 DWLVTLGIEPSKRQAREDVGNGAIYINGERQQNLEKIMDASDRIENKFTIVRRGKKKYFL 425

Query: 414 C 414
            
Sbjct: 426 V 426


>gi|296129499|ref|YP_003636749.1| tyrosyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021314|gb|ADG74550.1| tyrosyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 427

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 137/418 (32%), Positives = 215/418 (51%), Gaps = 10/418 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L+ RG + Q ++   L    + G V+ Y G+D TA SLH G+L Q++ +  LQ
Sbjct: 1   MTDILDELAWRGLLSQHTDLDALRTEMAAGPVSLYCGFDPTAPSLHIGNLVQILTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P +L+GG T +IGDP      R +     +   +E+I+G  +  +++  G   A 
Sbjct: 61  DAGHRPFALVGGATGLIGDPKM-TGERTLNSPDVVAGWVERIRGQIAPLLRFD-GPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID LR++G  + +  ML+ ++V  RL  EQ +SF EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTAGMSAIDFLRDVGKHYRLGTMLAKDTVARRLNSEQGISFTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +   LQ GG+DQWGN++ G++L  +++   + A+T+PL+T A GTK GKT SG 
Sbjct: 179 LELYRRHGVHLQTGGNDQWGNLLSGVELVRKVEGVPVHAITTPLITKADGTKFGKTESGT 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+  MT+PY F+Q+W N DDADV  + K  T     EI     A  Q     EA++ +
Sbjct: 239 VWLDPAMTTPYAFYQFWLNADDADVAGYLKVFTFRTREEIATLEEAVAQRPAAREAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS------IHSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T +VHG + A+    A+   F           +       +       G  L+ L 
Sbjct: 299 AYDVTALVHGTDAADAVVAASQALFGRGELGALDEATLAAAVAELPTAPGRAGDVLVDLF 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              G   S   ARR +      +NN  ++ +   +  +D        L  GK+   + 
Sbjct: 359 AATGVVASKAAARRAIAEGGASVNNVRVTEDGATLGAEDLLHGRWAVLRRGKRTLAVV 416


>gi|145224097|ref|YP_001134775.1| tyrosyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315444434|ref|YP_004077313.1| tyrosyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145216583|gb|ABP45987.1| tyrosyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315262737|gb|ADT99478.1| tyrosyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 425

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 142/429 (33%), Positives = 225/429 (52%), Gaps = 15/429 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D L  L  RG I Q ++   L  + + G  T Y G+D TA SLHAGHL  L+ L
Sbjct: 1   MST--PDILDDLEWRGLIAQSTDREALGEMLAAGPATVYSGFDPTAPSLHAGHLIPLLTL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L GG T +IGDP      R +  +  + +  ++I+G    F+++   +
Sbjct: 59  RRFQQAGHRPIVLAGGATGMIGDPRDVG-ERTLNTADTVADWADRIRGQLERFVEFDDSE 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A++ +N TW   +  I+ LR++G  FSVN ML  ++VR RL+ +  +S+ EF+YM+LQ
Sbjct: 118 TGAIVADNLTWTSELSAIEFLRDVGKHFSVNVMLDRDTVRRRLEGD-GISYTEFSYMLLQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+VEL + Y C LQ+GGSDQWGNII G+ L  +     + A+T+PL+T + G K GK+
Sbjct: 177 ANDYVELHQRYGCTLQVGGSDQWGNIIAGVRLVRQKAGAAVHAMTTPLVTDSEGKKFGKS 236

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT--LPMSEIDRMAKLQGKEINE 297
              G++WL+ EMTSPY ++QY+ N  DADVV + +  T           +A  +      
Sbjct: 237 TGGGSLWLDPEMTSPYAWYQYFINTADADVVPYLRWFTFLTAEELAELELATAERPHERA 296

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRG 349
           A++ +A E+T +VHG         A+   F     +          +   ++++ +    
Sbjct: 297 AQRRLARELTNLVHGEAATAAVELASQALFGRGELADLDENTLAGAVREAAVAQLDPGGP 356

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V  G + S   ARR +    + +NN+ ++ +    +  DF     + L  GK+
Sbjct: 357 DSIVDLLVATGLSASKGAARRTVAEGGVYVNNAKVTADDWVPQPSDFLHGRWLVLRRGKR 416

Query: 410 NHIICHLCG 418
           N       G
Sbjct: 417 NIAGVERVG 425


>gi|108799921|ref|YP_640118.1| tyrosyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869031|ref|YP_938983.1| tyrosyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123070071|sp|Q1B7S2|SYY_MYCSS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083661|sp|A1UH85|SYY_MYCSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|108770340|gb|ABG09062.1| tyrosyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695120|gb|ABL92193.1| tyrosyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 423

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 144/425 (33%), Positives = 228/425 (53%), Gaps = 13/425 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S  L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   Q
Sbjct: 1   MSSILDELDWRGLIAQSTDRDALAAELAAGPMTLYSGFDPTAPSLHAGHLVPLLTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI L GG T +IGDP      R +  +  + +  ++I+G    F+++    T A+
Sbjct: 61  QAGHRPIVLAGGATGMIGDPRD-TGERTLQTADTVADWADRIRGQLERFVEFDESPTGAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN +W  ++  I+ LR++G +FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA D+
Sbjct: 120 VENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SG 243
           V+L K + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+   G
Sbjct: 179 VQLRKRHGCALQIGGSDQWGNIVAGVRLVRQKLGDTVHAMTTPLVTDSEGKKFGKSTGGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
            +WL+ EMT+PY ++QY+ N  DADVV++ +  T L   E+  + +          A++ 
Sbjct: 239 NLWLDPEMTTPYAWYQYFINTADADVVNYLRWFTFLEAGELAELEEATRDRPHQRTAQRR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGLL 353
           +A E+TT+VHG +       A+   F             +  +   S+++   S    + 
Sbjct: 299 LARELTTLVHGEDATRSVEHASQALFGRGELAALDEPTLAAALREASVAELTPSGPDLIT 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V  G + S   ARR +    + +NN  I +++   +  DF     + L  GK+N   
Sbjct: 359 DLLVATGLSASKGAARRTIAEGGVSVNNMKIDSDEWTPQASDFLHGRWLVLRRGKRNIAG 418

Query: 414 CHLCG 418
               G
Sbjct: 419 VQRVG 423


>gi|282880553|ref|ZP_06289260.1| tyrosine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305656|gb|EFA97709.1| tyrosine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 433

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 142/436 (32%), Positives = 224/436 (51%), Gaps = 27/436 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + Q+    E   L  + +V+AY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MTKNFVEELKWRGMLAQMMPGTE--ELLEKQMVSAYLGTDPTADSLHIGHLCGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTD 122
           Q+ GHKP  L+GG T +IGDPS +   R ++ S+ +  N E IK   S F+ + G     
Sbjct: 59  QRCGHKPYLLLGGATGMIGDPSGKSLERNLLDSETLYHNQEAIKKQVSKFLDFEGNEPNK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A ++NN  W+   K++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AELVNNYDWMKDFKFLDFAREVGKHITVNYMMAKDSVKKRLNGEANDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+ L + +  +LQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K G
Sbjct: 179 GYDFLYLYQKHGIKLQLGGNDQWGNMTTGTELIRRTLGSDEEAFCLTCPLITKADGKKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           KT +G IWL++  T+PY F+Q+W N+ D D   + K  T+L    I+ +     ++    
Sbjct: 239 KTENGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLERETIESLITEHQQDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISIS 342
             +K +A E+T MVH +E+ + A  A+   F  +                   +P  ++S
Sbjct: 299 TLQKRLAQEVTVMVHSQEDLDMAIEASQILFGKATKESLQKLDEATFLDVFNGVPHYTVS 358

Query: 343 KDEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           KD +  G   +    + G     S  E R+ +K   + +N   ++     +  +D     
Sbjct: 359 KDLL--GSTAVDFFTQEGMEIFPSKGELRKLVKGGGVSLNKEKLTAFDQVVTAEDLIDGK 416

Query: 401 NIKLSFGKKNHIICHL 416
            + +  GKKN+ +  +
Sbjct: 417 YLLVQRGKKNYFLITV 432


>gi|85858578|ref|YP_460780.1| tyrosyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|97202272|sp|Q2LR98|SYY_SYNAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85721669|gb|ABC76612.1| tyrosyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 428

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 166/429 (38%), Positives = 252/429 (58%), Gaps = 23/429 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   +  ERGFI Q+++   +        +  YIG+D TA SLH G L  +M L  LQ+
Sbjct: 4   KNVYDVFMERGFIEQVTDENAVRKALEA-PLACYIGFDPTARSLHIGSLVPIMALIHLQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  I+L+GGGT++IGDPS + E R+++  ++I+ N   ++  F+ ++ +      A+M
Sbjct: 63  HGHTSIALVGGGTALIGDPSGKTEMRQILTREKIELNATCMRRQFARYLSF--EDKKAMM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + YI  LR+IG  FSVN+ML+ ES + RL  E+ L+F+EFNYM+LQAYDF+
Sbjct: 121 INNADWLTKLNYISFLRDIGRHFSVNKMLAAESYKMRL--EKGLNFIEFNYMLLQAYDFL 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +N++C +QMGG+DQWGN++ G+DL  R++     ++T PLLTTA+G KMGKT  GA+
Sbjct: 179 YLFQNHNCVMQMGGNDQWGNMLAGVDLIRRVEGKVAHSMTFPLLTTATGQKMGKTEKGAV 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++E+TSPY ++QYW N  D DV  F    T LPM EI ++  L  KE+N AK I+A E
Sbjct: 239 WLDRELTSPYEYYQYWINTGDIDVGKFLALFTFLPMEEIHQVKSLSDKELNMAKAILAFE 298

Query: 306 ITTMVHGREEAEKAATA------------------AMECFDMSIHSQHMPTISISKDEVS 347
            T + HG + A  A  A                   +    +S  +  +P I  S +E++
Sbjct: 299 ATKITHGEDAALAAWNASAVAFGVKLIDTSLMPSSTIPRGQLSQDASAIPFIKKSWNELA 358

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +G+    ++ + G  +S +EARR +      +N + I      I  +  D +G IKL  G
Sbjct: 359 KGIPAYEIMHECGLCSSKSEARRLIAQGGGYVNENPIFAFDELITTEHLDRSGQIKLRKG 418

Query: 408 KKNHIICHL 416
           KK ++I  +
Sbjct: 419 KKKYMIIKV 427


>gi|240079959|ref|ZP_04724502.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA19]
 gi|240117199|ref|ZP_04731261.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID1]
 gi|268596100|ref|ZP_06130267.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268602890|ref|ZP_06137057.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268549888|gb|EEZ44907.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268587021|gb|EEZ51697.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 431

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 155/428 (36%), Positives = 224/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EID             EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+  +  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDAYLLIGEYKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|227495383|ref|ZP_03925699.1| tyrosine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831137|gb|EEH63520.1| tyrosine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 421

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 234/422 (55%), Gaps = 11/422 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD +  L  RG I Q ++  +L    S G VT Y GYD TA SLH GHL QL+L+  LQ
Sbjct: 1   MSDIIEELQWRGLIRQHTDLTKLREALSNGPVTFYCGYDPTAPSLHHGHLVQLILMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P++L+GG T +IGDP      R +   + ++  +EK++   S F+ +  G+  A+
Sbjct: 61  NAGHRPLALVGGATGLIGDPRM-SGERTLQPREVVEGWVEKLRAQISRFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  IDLLR++G +F +  ML  E+V  RL  E+ +S+ EF+Y ILQA DF
Sbjct: 119 MVNNLDWTSELSAIDLLRDLGKYFRMGTMLKKEAVSRRLASEEGISYTEFSYQILQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + Y C L+ GG DQWGN+I G+DL  R +   +  +T+PL+T A GTK GK+  GA
Sbjct: 179 LQLYRRYGCTLETGGDDQWGNLIGGLDLIHRTEGADVHVMTTPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL++++ SPY F+Q+W N+DDADVV F K  T L  +EI+R+ K   +     EA+K +
Sbjct: 239 IWLSEDLLSPYAFYQFWLNVDDADVVRFLKVFTFLERAEIERLEKAVAEEPFRREAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG-MGLLTL 355
           A  +T +VHG E+  +   A    +                T  +   E++ G   ++  
Sbjct: 299 AASVTELVHGGEKLAQVLAATEALWGSGDLRAVDAATLASATDHLPSGEITLGEATIVDA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG       ARR  +S    +NN  + +    +   D  + G I +  G++N  +  
Sbjct: 359 LVAAGLEKGRGAARRTAESGGAYLNNVKVEDVDAPLTAADRLADGTILIRKGRRNLAVIR 418

Query: 416 LC 417
           + 
Sbjct: 419 VV 420


>gi|126435549|ref|YP_001071240.1| tyrosyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|189083660|sp|A3Q0S2|SYY_MYCSJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126235349|gb|ABN98749.1| tyrosyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 423

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 143/422 (33%), Positives = 227/422 (53%), Gaps = 13/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S  L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   Q
Sbjct: 1   MSSILDELDWRGLIAQSTDRDALAAELAAGPMTLYSGFDPTAPSLHAGHLVPLLTLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI L GG T +IGDP      R +  +  + +  ++I+G    F+++    T A+
Sbjct: 61  QAGHRPIVLAGGATGMIGDPRD-TGERTLQTADTVADWADRIRGQLERFVEFDESPTGAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN +W  ++  I+ LR++G +FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA D+
Sbjct: 120 VENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SG 243
           V+L K + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+   G
Sbjct: 179 VQLRKRHGCALQIGGSDQWGNIVAGVRLVRQKLGDTVHAMTTPLVTDSEGKKFGKSTGGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
            +WL+ EMT+PY ++QY+ N  DADVV++ +  T L   E+  + +          A++ 
Sbjct: 239 NLWLDPEMTTPYAWYQYFINTADADVVNYLRWFTFLEAGELGELEEATRDRPHQRTAQRR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGLL 353
           +A E+TT+VHG +       A+   F             +  +   S+++   S    + 
Sbjct: 299 LARELTTLVHGEDATRSVEHASQALFGRGELAALDEPTLAAALREASVAELTPSGPDLIT 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V  G + S   ARR +    + +NN  I +++   +  DF     + L  GK+N   
Sbjct: 359 DLLVATGLSASKGAARRTIAEGGVSVNNVKIDSDEWTPQASDFLHGRWLVLRRGKRNIAG 418

Query: 414 CH 415
             
Sbjct: 419 VQ 420


>gi|119944682|ref|YP_942362.1| tyrosyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|119863286|gb|ABM02763.1| tyrosyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 423

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 153/415 (36%), Positives = 217/415 (52%), Gaps = 10/415 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L  RG I Q++   EL    S G  T Y G+D TA SLH G L  L+ L   Q
Sbjct: 1   MNALLEDLQARGLIAQMTADEELHEHLSSGCKTLYCGFDPTADSLHIGSLVPLVTLKRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP++L+GG T +IGDPSF+   R++     + +  EKIKG  S+FI++G  +  A 
Sbjct: 61  DAGHKPLALVGGATGLIGDPSFKAVERKLNTDDVVADWAEKIKGQVSAFIEFGDRENSAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYD 183
           ++NN  W+  +  I  LR++G  FSVN M+  ESV+ R+ R+   +SF EF YM+LQ+YD
Sbjct: 121 VVNNLDWIGKMDTISFLRDVGKHFSVNAMIQKESVKQRIDRDGSGMSFTEFTYMLLQSYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K   C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GKT +G
Sbjct: 181 FAALNKANGCSLQIGGSDQWGNITGGIDLTRRMNQEKVFGLTLPLVTKSDGTKFGKTEAG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W    DADV  F    T L + EI          +   E + I
Sbjct: 241 TIWLDAAKTSPYAFFQFWITTLDADVYKFLHYFTFLSVEEIAAIEENDKTIQGRPEGQNI 300

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQH------MPTISISKDEVSR-GMGLLT 354
           +A ++T MVHG +    A       F   + +        +    +    V      L+ 
Sbjct: 301 LAQQVTKMVHGEQGLGSAQRITEALFSGDLSALDESDLAQLAQDGLPATFVEGTEKPLVE 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           L+     A S   AR  +K+ A+ IN    ++ ++ ++  D        +  GK+
Sbjct: 361 LLTSCELAKSNKMAREFIKNGAVSINGEKQTDSEVILQKLDALFGKYTVIKRGKR 415


>gi|15232946|ref|NP_186915.1| emb2768 (EMBRYO DEFECTIVE 2768); ATP binding / RNA binding /
           aminoacyl-tRNA ligase/ nucleotide binding /
           tyrosine-tRNA ligase [Arabidopsis thaliana]
 gi|6957729|gb|AAF32473.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana]
 gi|62320566|dbj|BAD95182.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana]
 gi|117168055|gb|ABK32110.1| At3g02660 [Arabidopsis thaliana]
 gi|332640324|gb|AEE73845.1| tyrS tyrosyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 511

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 147/432 (34%), Positives = 224/432 (51%), Gaps = 19/432 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLF 61
           F+ + + IL ERG +  I++              +  Y G+D TA SLH G+L  +++L 
Sbjct: 81  FRPNVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPTAESLHLGNLLGIIVLS 140

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W Q+ GH+ + L+GG T  +GDPS +   R  + +  +++NI  I  I    +       
Sbjct: 141 WFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGITKIIIKILGSNPSPG 200

Query: 122 DAL-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +  + NN  W   +  +D L ++G F  V  M++ ESV+ RL+ EQ +S+ EF Y +LQ
Sbjct: 201 GSYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKRLESEQGMSYTEFTYQLLQ 260

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
           AYDF+ L KN    +Q+GGSDQWGNI  G DL  ++   +   + LT PLL    GTK G
Sbjct: 261 AYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEAAYGLTFPLLLKNDGTKFG 320

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEI 295
           K+  GAIWL+  M SPY F+QY+ ++ D DV+ F K LT L + EI   +      G   
Sbjct: 321 KSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKILEDQMSKPGYVP 380

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
           N A+  +A E+T  VHG E  ++A  A       +             + +P+ S+  D 
Sbjct: 381 NTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIAEDIPSCSLPIDR 440

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           VS G+ ++ L V AG   S + ARR LK     +NN  + +E  ++  +D      + LS
Sbjct: 441 VS-GLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDENKRVDEEDIVEGRGLVLS 499

Query: 406 FGKKNHIICHLC 417
            GKKN ++  + 
Sbjct: 500 AGKKNKVVVRIS 511


>gi|317504618|ref|ZP_07962586.1| tyrosine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664267|gb|EFV03966.1| tyrosine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 433

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 143/436 (32%), Positives = 223/436 (51%), Gaps = 27/436 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + QI    E        +V+AY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MAKNFVEELKWRGMLAQIMPGTE--EYLQTHMVSAYLGTDPTADSLHIGHLCGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q+ GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ +  +    
Sbjct: 59  QRCGHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQVAKFLDFDGSEPNK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A ++NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AELVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K G
Sbjct: 179 GYDFLYQYQHYGVRLQLGGNDQWGNMTTGTELIHRTLGNDAEAFCLTCPLITKADGKKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEIN 296
           KT SG +WL+++ T+PY F+Q+W N+ D+D   + K  T L   EID       Q     
Sbjct: 239 KTESGNVWLDRQRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKEEIDGLVAEHQQDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISIS 342
             +K +A E+TTMVH +E+ + A  A+   F                +   + +P  +I 
Sbjct: 299 ILQKRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDSLAQLDEATLNDVFKDVPHYTID 358

Query: 343 KDEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  +  G   + +  + G     S +E R+ +K   + +N   +S     +   D     
Sbjct: 359 RSLL--GNPAVDVFNQEGMDIFPSKSEMRKLVKGGGVSLNKEKLSAFDQLVTTDDLIDGK 416

Query: 401 NIKLSFGKKNHIICHL 416
            + +  GKKN+ +  +
Sbjct: 417 YLLVQRGKKNYYLITV 432


>gi|315652795|ref|ZP_07905769.1| tyrosine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315484997|gb|EFU75405.1| tyrosine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 411

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 163/416 (39%), Positives = 242/416 (58%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     +    L  RG I Q++N  E+  + + G  T YIG+D TA SLH GH   L L+
Sbjct: 1   MDDM--NCYEELKARGLIAQVTNEEEISKMINNGEATFYIGFDPTADSLHVGHFMALCLM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  G+KPI+L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++  G+
Sbjct: 59  KRLQMAGNKPIALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSRFIEF--GE 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  WL  + Y++ +R+IG  FSVN ML  +   +R+     LSFLEFNYMILQ
Sbjct: 117 NKARMVNNADWLRDLNYMEFIRDIGPHFSVNNMLRAKCYENRM--ANGLSFLEFNYMILQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF  L  +Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT
Sbjct: 175 SYDFYRLFLDYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKT 234

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WL+   T+P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+
Sbjct: 235 VGGAVWLDPNKTTPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSLWEGAKLNEAKE 294

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI-SKDEVSRGMGLLTLIVKA 359
           I+A  +T +VHG+EEA+KA  A    F       ++PT  +  +D     + L  ++   
Sbjct: 295 ILAMHLTELVHGKEEAKKANAAGKSLFTGGGDMSNVPTYILRPEDYRDDTIDLSGVLAVC 354

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G + + +EARR+++   + I   +I + K      DF   G + +  GKKN     
Sbjct: 355 GLSKTRSEARRNIEQGGVSIEGEVIKDIKKTFTKDDFAGEG-LLIKRGKKNFCKVK 409


>gi|330836945|ref|YP_004411586.1| tyrosyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748848|gb|AEC02204.1| tyrosyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 418

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 169/420 (40%), Positives = 242/420 (57%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L IL +RGFI   ++   L  L  +  VT Y+G D +  S+H GH+     +  +Q
Sbjct: 1   MNKTLQILHDRGFIKACTDSDALSDLMDKEPVTFYVGVDPSGRSIHIGHMVPFFAMHHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGK 120
           + GH PI+L+GGGT +IGDPS + E R+M+  ++I  N   IK    + I +      G 
Sbjct: 61  EAGHNPIALVGGGTGMIGDPSGKTELRKMLTHEQIAANSASIKKQLGTVIDFAEMPPNGL 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  WL  + YID LREIGS FSVNRML+FES + RL  E+ LSF+EFNY +LQ
Sbjct: 121 GRAQMVNNADWLLGLNYIDFLREIGSQFSVNRMLTFESYKQRL--ERGLSFIEFNYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF+ L + + CRLQMGG DQWGNI+ GIDL  R+++ + + LT  L+  A G KMGK+
Sbjct: 179 SYDFLTLYRTHGCRLQMGGDDQWGNIVAGIDLIRRMESAECYGLTFNLIMRADGKKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA++L+ +M SPY+F+QYWRN++DADV  F K  T LP+ EID  AK  G  INE K+
Sbjct: 239 EKGAVFLDPDMYSPYDFYQYWRNVNDADVFKFMKLFTFLPLEEIDDYAKP-GVNINEVKE 297

Query: 301 IIATEITTMVHGR----EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
            +A E T ++HG+    +  + A  A           + MP++ I  D ++ G+  L L 
Sbjct: 298 RLAWEQTRIIHGQEEADKARDAAKAAFGSTGANPAAREGMPSMEIPADRLASGIPALELF 357

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V++    S ++ RR +      +N + I +    I     D  G + L  GKK      +
Sbjct: 358 VESKLVPSNSDGRRLIAGGGAHVNETKIESHDQVIDSSWRDEQGELILRSGKKKFFRIIV 417


>gi|296284067|ref|ZP_06862065.1| tyrosyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 407

 Score =  355 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 201/414 (48%), Positives = 278/414 (67%), Gaps = 9/414 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP ++S+ L++L +R + HQI++   LD+L S+ +V  Y+G+D TASSLH G L Q+MLL
Sbjct: 1   MPTYRSELLNVLDQRHYTHQITDAERLDLLASEQIVPGYVGFDPTASSLHVGSLVQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+TGHKPI +MGGGT  IGDPS RDESR++M  + I  NI  I+ +F   + +G G 
Sbjct: 61  RRLQQTGHKPIVVMGGGTGKIGDPSGRDESRQLMTEEVIAANIASIRKVFERILTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  + Y+DLLR++G  F+VNRML+F+SV+ RL REQ L+FLEFNYMILQ
Sbjct: 121 TDAVMVNNDEWLSGLGYLDLLRDVGPHFTVNRMLTFDSVKMRLDREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA+ Y CRLQMGGSDQWGNI+ GI+L  R    +LF  T+PLLTTA G KMGKT
Sbjct: 181 AYDFRELAERYGCRLQMGGSDQWGNIVNGIELTRRTGGGELFGFTTPLLTTADGKKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN++M   Y+FWQ+WRN DD DV  F +  T +P+ EI+R+ +L+G EIN+AK 
Sbjct: 241 ASGAVWLNEDMLPAYDFWQFWRNTDDRDVGRFLRLFTDIPLDEIERLERLEGAEINDAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A  +T +V G + A  A   A E F        +PT+S+       GMGL   +   G
Sbjct: 301 ALANAVTALVRGEDAAAAAEATARETFAGGAG-GDLPTLSV-----GDGMGLPAALSALG 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R +   A+++++ ++S+  + + +   +      LS G+K H I 
Sbjct: 355 FTASNKEAKRKIAEGAVRLDDEVLSDSAMVLTVAQGEQRR---LSLGRKKHAIL 405


>gi|28379288|ref|NP_786180.1| tyrosine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|300766749|ref|ZP_07076664.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308181488|ref|YP_003925616.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|81630766|sp|Q88TV5|SYY_LACPL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28272127|emb|CAD65031.1| tyrosine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|300495657|gb|EFK30810.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046979|gb|ADN99522.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 418

 Score =  355 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 149/421 (35%), Positives = 216/421 (51%), Gaps = 16/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDDLKWRGAINQQTDEAGLKELTENQSVSLYCGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  ++GGGT  IGDPS ++  R++    +++ N + +         +     +  ++
Sbjct: 62  GHHPYVVVGGGTGAIGDPSGKNSERKLQTMDQVKHNQDGLSAQMYKLFGHD---ENFSIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLDFLRDYGKLFSVNTMLNKEVVASRL--EVGISYTEFTYQILQSVDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +    +LQ+GG+DQWGNI  G DL  R      K + LT PLL  A GTK GKT  GA
Sbjct: 177 LYRAEHVQLQIGGADQWGNITAGTDLIHRLEGNDAKAYGLTIPLLLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WLN E TSPY F+Q+W N DD DVV + K  T L   EIDR         E  EA++ +
Sbjct: 237 VWLNPERTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDRLAETVKTAPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTLI 356
           A E+T  VHG++   +A       F   + S     I      +   +VS     ++  +
Sbjct: 297 AEEVTEFVHGKQAVVEAENITKALFTGDVQSLTADEIEQGFKGVPSADVSAEKQNIVLWL 356

Query: 357 VKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V A  F  S  +AR  +K+ AI+IN   +++ + +I      +   + +  GKK + + H
Sbjct: 357 VDATKFEPSRRQAREDIKNGAIRINGEKVTDVEAEIDPSAAFNGKFVIVRRGKKRYFLAH 416

Query: 416 L 416
           +
Sbjct: 417 V 417


>gi|309813251|ref|ZP_07706971.1| tyrosine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308432788|gb|EFP56700.1| tyrosine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 433

 Score =  355 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 224/420 (53%), Gaps = 10/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L  RG + Q ++  +L    + G +T Y G+D TA SLH G+L QL+ L  LQ+
Sbjct: 15  SNILDELQWRGAVAQTTDETQLRDALANGPLTVYCGFDPTAPSLHFGNLVQLIQLRRLQR 74

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+GG T +IGDP      R +    +  + + +I+     F+ +  G   A+ 
Sbjct: 75  AGHRVIVLVGGSTGLIGDPRP-SAERVLKTKDQTAQWVARIREQVQPFLDFD-GDNPAIA 132

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   I  +D LR+ G  F VN M+  ++V +RL  EQ +S+ EF+Y ILQA D++
Sbjct: 133 VNNLDWTQGISALDFLRDYGKHFRVNGMIKKDAVAARLNSEQGISYTEFSYQILQALDYL 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C LQ+GGSDQWGN+I G DL   ++   +  LTSPLLT ASG K GK+   AI
Sbjct: 193 HLFREYGCTLQLGGSDQWGNLIAGSDLIRSVEGKSVHVLTSPLLTDASGQKYGKSEGNAI 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ +MTSPY F+QY+ N++D++V+   K +T     E+ ++ +   +      A+K +A
Sbjct: 253 WLDAQMTSPYAFYQYFLNVEDSEVIKLIKFITDRTKDEVAQLERAVAEEPFKRAAQKTLA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLIV 357
            ++TT+VHG      A  A+   F     +             +   EVS G  L   ++
Sbjct: 313 ADVTTLVHGEAATAGAIAASEAMFGKGDVTALDAGTLRDAVAELPGGEVSPGTTLTDALI 372

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G A S N ARR +   AI +NN+ + + + ++   DF       +  G+K+     L 
Sbjct: 373 AVGIAESRNAARRLIGDGAISVNNAKLDDPEHELNADDFLHGVAAIIKRGRKHQAAARLA 432


>gi|304386058|ref|ZP_07368399.1| tyrosine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327981|gb|EFL95206.1| tyrosine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 417

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ 
Sbjct: 2   NIIDELDWRGAINQQTDEEGLKKLTEEKSIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS +   R +   +++  N E +K     F     G  +  ++
Sbjct: 62  GHKPVILIGGGTGSIGDPSGKKSERVLQSMEQVHHNEEALKKQLVKFF----GTDNFRIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K+ D +LQ+GG DQWGNI  G DL  R+  +  K++ LT PLL  A GTK GK+  G 
Sbjct: 176 LYKHEDVQLQIGGGDQWGNITAGTDLIHRMEGQDAKVYGLTIPLLLKADGTKFGKSEGGN 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV F K  T L   EI+R         E  EA++ +
Sbjct: 236 VWLDPEKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   E+A   +   F   +            ++MP++ +   + +  + L
Sbjct: 296 AEEVTEFVHGKAAVEEAQHISAALFSGDVKDLTASEIEQGFKNMPSVEVENKKENIVLWL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +          S  +AR  +K+ AI+IN   I++   +I          + +  GKK + 
Sbjct: 356 VD---TTKIEPSRRQAREDIKNGAIRINGEKITDVDAEIDPTSHFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|225390680|ref|ZP_03760404.1| hypothetical protein CLOSTASPAR_04435 [Clostridium asparagiforme
           DSM 15981]
 gi|225043298|gb|EEG53544.1| hypothetical protein CLOSTASPAR_04435 [Clostridium asparagiforme
           DSM 15981]
          Length = 408

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 165/401 (41%), Positives = 244/401 (60%), Gaps = 6/401 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT +IGDPS R + R MM  + IQ N +  K   S FI +  G   A+M+N
Sbjct: 63  NRPIALIGGGTGMIGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEG--KAMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NAEWLLGLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T+P++F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N AK+I+A E+T
Sbjct: 239 DPEKTTPFDFYQYWRNVADADVLKCLRMLTFLPIEQIDEMDQWEGSQLNTAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+KA   A   F     +++MP   ++ ++   G + +L+++ K+G + S +
Sbjct: 299 KLVHGEEEADKAQEGARALFSAGGSTENMPICELADEDFKDGSIDILSVLHKSGLSASRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           EARR+++   + ++   + + K       F+  G +    G
Sbjct: 359 EARRNVEQGGVSVDGEAVKDVKAVYARSQFEGEG-MVFKRG 398


>gi|228999836|ref|ZP_04159408.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228759778|gb|EEM08752.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 420

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDVDGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYKEEGVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG     +A       F   I S     I     ++           ++  +
Sbjct: 299 AEEMTKFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDERFIIIRKGKKNYSLVKL 418


>gi|302670891|ref|YP_003830851.1| tyrosyl-tRNA synthetase TyrS [Butyrivibrio proteoclasticus B316]
 gi|302395364|gb|ADL34269.1| tyrosyl-tRNA synthetase TyrS [Butyrivibrio proteoclasticus B316]
          Length = 406

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 164/409 (40%), Positives = 244/409 (59%), Gaps = 7/409 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  ++  L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   IYEELKARGLIAQVTDEEQIRELVNAGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N E  K     FI++G     A+M+N
Sbjct: 63  NKPIALIGGGTTMIGDPSGRTDMRKMLTREDIDHNAECFKRQMEKFIEFGDD--KAIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 121 NADWLMNLNYIELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYM 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C L+ GG DQW N++ G +L  R       A+T  LLT + G KMGKT   A+WL
Sbjct: 179 FQKYNCNLEFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLTDSQGKKMGKTAGNAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV    K LT +P+ EI  M K     INE K+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDADVDKCIKMLTFIPIEEILEMEKWDDSRINEKKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
           ++VHG+EEA+KA  AA   F       ++P +++ +++   G + +L ++V AG   + +
Sbjct: 299 SLVHGKEEAQKAQDAARALFAGGGDMSNVPAVALKEEDFRDGVVDILQVLVSAGLCNTRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR ++   +      +++ K       F     + +  GKK++    
Sbjct: 359 EARRAVEQGGVTFAEEKVTDVKTTYTKDVFADG--VMVRKGKKSYKKVT 405


>gi|320011551|gb|ADW06401.1| tyrosyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 422

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 142/421 (33%), Positives = 227/421 (53%), Gaps = 11/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G KP++L+GG T  IGDP      R +   + I   +++++G    F+ +  G   A 
Sbjct: 61  LAGLKPLALVGGATGQIGDPRP-TAERTLNDPETIAAWVQRLRGQIEPFLTFE-GPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  GIDL  R      + AL +PL+  A GTK GK+ SG
Sbjct: 179 LELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAAVHALATPLMVKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ + KL  +      A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEKLTEERPQARSAQRS 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG E+      A+   F      +            +    V+    ++ L
Sbjct: 299 LAEELTTLVHGGEQCAAVIAASKALFGQGELGELDEATLSAALSEVPHARVTELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G + S + ARR +K     +NN+ +++ +      +      + L  GKKN     
Sbjct: 359 LVEVGLSASKSAARRTVKEGGAYVNNAKVTDGESAPSADELLHGRWLVLRRGKKNLAAVE 418

Query: 416 L 416
           +
Sbjct: 419 V 419


>gi|297832898|ref|XP_002884331.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330171|gb|EFH60590.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 511

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 147/431 (34%), Positives = 225/431 (52%), Gaps = 19/431 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + + + IL ERG +  I++              +  Y G+D TA SLH G+L  +++L W
Sbjct: 82  RPNVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPTAESLHLGNLLGIIVLSW 141

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ + L+GG T  +GDPS +   R  + +  +++NI  IK I    +        
Sbjct: 142 FQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGIKRIIIKILGGNPSSGG 201

Query: 123 AL-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           +  + NN  W   +  +D L ++G F  V  M++ ESV+ RL+ EQ +S+ EF Y +LQA
Sbjct: 202 SYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKRLESEQGMSYTEFTYQLLQA 261

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGK 239
           YDF+ L KN    +Q+GGSDQWGNI  G DL  ++   +   + LT PLL    GTK GK
Sbjct: 262 YDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEAAYGLTFPLLLKNDGTKFGK 321

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEIN 296
           +  GAIWL+  M SPY F+QY+ ++ D DV+ F K LT L + EI   +      G   N
Sbjct: 322 SEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKILEDQMSKPGYVPN 381

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEV 346
            A+  +A E+T  VHG E  ++A  A       +             + +P+ S+  D V
Sbjct: 382 TAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIAEDIPSCSLPIDRV 441

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S G+ ++ L V AG   S + ARR LK     +NN  + +E  +++ +D      + LS 
Sbjct: 442 S-GLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDENKRVEEEDIVEGKGLVLSA 500

Query: 407 GKKNHIICHLC 417
           GKKN ++  + 
Sbjct: 501 GKKNKVVVRIS 511


>gi|293189895|ref|ZP_06608601.1| tyrosine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821198|gb|EFF80144.1| tyrosine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 420

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 138/422 (32%), Positives = 223/422 (52%), Gaps = 11/422 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ
Sbjct: 1   MTDILDELQWRGLLAQHTDLEALREHLNAGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P++L+GG T  IGDP  +   R++  ++ ++   +++    S F+ +  G   A 
Sbjct: 61  LAGHRPLALVGGATGQIGDPR-QSGERQLQSTEVVKGWADRLHSQISKFLDFE-GPAAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID+LR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQEMSAIDMLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   C L+ GG+DQWGN++ G+DL  +++      +T+P++T A GTK GK+  GA
Sbjct: 179 LELYRRNGCTLETGGNDQWGNMVGGVDLIRKVEGVDTHVMTTPIITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ EM +PY F+Q+W  + D DVV F K  T     EI+   +   +      A+K +
Sbjct: 239 IWLDPEMMTPYAFYQFWLQVADDDVVRFLKIFTFKSREEIEALAVEVAERPHQRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH------MPTISISKDEVSRGMG-LLTL 355
           A  +T +VHG ++ E+   A    +                T  + +  ++ G   +   
Sbjct: 299 AASVTELVHGADQLERVLAATDALWGGGDIRDLDEATLVAATADLPRASLTIGESTVADA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  GF      ARR + S    INN  + + +  ++ +D  + G   +  G+KN  +  
Sbjct: 359 LVALGFEKGKTAARRTISSGGASINNVKVEDPEAVLRDEDVVAGGLALIRKGRKNLAVLE 418

Query: 416 LC 417
           L 
Sbjct: 419 LS 420


>gi|299142114|ref|ZP_07035248.1| tyrosine--tRNA ligase [Prevotella oris C735]
 gi|298576576|gb|EFI48448.1| tyrosine--tRNA ligase [Prevotella oris C735]
          Length = 433

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 138/436 (31%), Positives = 222/436 (50%), Gaps = 27/436 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + QI    E        +V+AY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MAKNFVEELKWRGMLAQIMPGTE--EYLQSNMVSAYLGTDPTADSLHIGHLCGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q+ GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ +       
Sbjct: 59  QRCGHKPYLLVGGATGMIGDPSGKSQERNLLDTKTLYHNQEAIKKQVAKFLDFDGNEPNK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A ++NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AELVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+ L +++  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K G
Sbjct: 179 GYDFLYLYQHHGVRLQLGGNDQWGNMTTGTELIRRTLGNEAEAFCLTCPLITKADGRKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           KT SG +WL++  T+PY F+Q+W N+ D+D   + K  T L    ID +     ++    
Sbjct: 239 KTESGNVWLDRNRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKETIDALIADHQQDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISIS 342
             +K +A E+TTMVH +E+ + A  A+   F                +   + +P  ++ 
Sbjct: 299 ILQKRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDSLAQLDEATLNDVFKDVPHYTVD 358

Query: 343 KDEVSRGMGLLTLI--VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  +  G   + +    +     S +E R+ +K   + +N   +S     +   D     
Sbjct: 359 RSLL--GSPAVDVFNQEEMDIFPSKSEMRKLVKGGGVSLNKEKLSAFDQLVTTDDLIDGK 416

Query: 401 NIKLSFGKKNHIICHL 416
            + +  GKKN+ +  +
Sbjct: 417 YLLVQRGKKNYYLITV 432


>gi|270291482|ref|ZP_06197703.1| tyrosyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270279979|gb|EFA25816.1| tyrosyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 417

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 220/424 (51%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ 
Sbjct: 2   NIIDELDWRGAINQQTDEEGLKKLTEEKSIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS +   R +   +++  N + +K     F     G  +  ++
Sbjct: 62  GHKPVILIGGGTGSIGDPSGKKSERVLQSMEQVHHNEDALKKQLVKFF----GTDNFRIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K+ D +LQ+GG DQWGNI  G DL  R+  +  K++ LT PLL  A GTK GK+  G 
Sbjct: 176 LYKHEDVQLQIGGGDQWGNITAGTDLIHRMEGQDAKVYGLTIPLLLKADGTKFGKSEGGN 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV F K  T L   EI+R         E  EA++ +
Sbjct: 236 VWLDPEKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   E+A   +   F   +            ++MP++ +   + +  + L
Sbjct: 296 AEEVTEFVHGKAAVEEAQHISAALFSGDVKDLTASEIEQGFKNMPSVEVENKKENIVLWL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +          S  +AR  +K+ AI+IN   I++   +I          + +  GKK + 
Sbjct: 356 VD---TTKIEPSRRQAREDIKNGAIRINGEKITDVDAEIDPTSHFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|28900223|ref|NP_799878.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361652|ref|ZP_05774679.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260896505|ref|ZP_05905001.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260899481|ref|ZP_05907876.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|81726271|sp|Q87J85|SYY1_VIBPA RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|28808534|dbj|BAC61711.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089276|gb|EFO38971.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308109218|gb|EFO46758.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308112741|gb|EFO50281.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 419

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   
Sbjct: 1   MTTPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +       
Sbjct: 60  QDAGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLS-KPM 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
           +M+NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+  +Q +SF EF+Y +LQ+Y
Sbjct: 119 IMVNNADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  
Sbjct: 179 DFAELNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       +   +A++
Sbjct: 239 GAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----GLLTL 355
           I+A E+T  VHG E    A       F  ++    +  +   + +    +      L+ L
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQDLVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++++G A+S   AR H+ +NAI +N   +S +   +    F       L  GKK+  +  
Sbjct: 359 LIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLF--DQYWLLQRGKKHFCLVK 416


>gi|227498531|ref|ZP_03928675.1| tyrosyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226903987|gb|EEH89905.1| tyrosyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 408

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 172/410 (41%), Positives = 247/410 (60%), Gaps = 4/410 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L ERG++ Q+S+  E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ 
Sbjct: 2   SVIDTLKERGYLKQLSHEEEIKELLEKEKITFYIGFDPTADSLHVGHFIALMVMAHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI LMGGGT +IGDPS ++E R+M+  + I  N+E  K     FI    G   A++ 
Sbjct: 62  GHRPIILMGGGTGMIGDPSGKNEMRKMLTPEFIHHNVECFKKQVGRFIDLSDG--KAIVA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  + YI  LRE+G  FSVNRML  E  ++RL  E  LSF E NYMI+QAYDF  
Sbjct: 120 DNANWLLGLNYIKFLREVGVHFSVNRMLGAECYKNRLASENGLSFFEMNYMIMQAYDFYV 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y+C +++GG DQW N+I G++L  R      F +T+ LLT + G KMGKT+ GA+W
Sbjct: 180 LHKKYNCVMELGGDDQWSNMIAGVELIRRKDRQPAFCMTNTLLTNSQGQKMGKTVGGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSP++F+QYWRN+DDADV      LT LPM E+ R+  L+G +INEAK  +A E+
Sbjct: 240 LSAEKTSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGSKINEAKVTLAYEV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG+EEA+KA  AA   F       + P + +S+ +   G  LL L+  A    S +
Sbjct: 300 TKLVHGKEEADKAKAAAEALFGAGGDMGNAPVVEVSRAQF--GSPLLDLLFDAKIIASKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++ N + + ++ +++    +    F+    + L  GKK +    L
Sbjct: 358 EGRRLIQQNGLTVGDTKVTDVAAALSETLFEGKTEVLLRKGKKKYYRLIL 407


>gi|328470193|gb|EGF41104.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 419

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   
Sbjct: 1   MTTPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +       
Sbjct: 60  QDAGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLS-KPM 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
           +M+NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+  +Q +SF EF+Y +LQ+Y
Sbjct: 119 IMVNNADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  
Sbjct: 179 DFAELNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       +   +A++
Sbjct: 239 GAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSYEEIASIEAQDQASQGKPQAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS---QHMPTISIS--KDEVSRGMGLLTL 355
           I+A E+T  VHG E    A       F  ++       +  + +      VS    L+ L
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIVSAQQDLVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++++G A+S   AR H+ +NAI +N   +S +   +    F       L  GKK+  +  
Sbjct: 359 LIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLF--DQYWLLQRGKKHFCLVK 416


>gi|325067200|ref|ZP_08125873.1| tyrosyl-tRNA synthetase [Actinomyces oris K20]
          Length = 426

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 142/417 (34%), Positives = 227/417 (54%), Gaps = 11/417 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    S G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 8   TDILDELQWRGLIAQHTDIDALRAALSDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDP  +   R +     +      ++    + + +  G   A +
Sbjct: 68  AGHRPLALVGGATGLIGDPRAKG-ERSLNTKDVVAGWAASLQEQLENLLDFS-GDNPAQI 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y +LQA D++
Sbjct: 126 VNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQVLQANDYL 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GK+  GAI
Sbjct: 186 ELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGASVHVMTNPLITKADGTKFGKSEGGAI 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+     +  +  EA++++A
Sbjct: 246 WLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEPEEIERLEAVTAENPKAREAQRVLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG------MGLLTLI 356
            E+ T VHG +   +A  A    +     +     TI  +  +++ G        ++ L+
Sbjct: 306 HEVCTWVHGADATAQAEAATSALWGRGDLADVDEATILAATADLASGDVAVGQTTIVDLL 365

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           V  G     N AR+ +      INN  +++E   I  +   + G + +  G++N  +
Sbjct: 366 VGTGLERGRNAARKTIAGGGAYINNVKVADETAVIGPEHLLAGGVVLVRKGRRNLAV 422


>gi|288926857|ref|ZP_06420764.1| tyrosine--tRNA ligase [Prevotella buccae D17]
 gi|288336382|gb|EFC74761.1| tyrosine--tRNA ligase [Prevotella buccae D17]
          Length = 432

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 144/434 (33%), Positives = 222/434 (51%), Gaps = 27/434 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + QI    E     ++ +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELKWRGMLAQIMPGTE--EYLNEHLVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ + +     A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQAAKFLDFDSDEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
            M+NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GK
Sbjct: 179 YDFLYQYQHYGVRLQLGGNDQWGNMTTGTELIRRTLGADAEAFCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG +WL++  T+PY F+Q+W N+ D D   + K  T+L    I+ + +   ++     
Sbjct: 239 TESGNVWLDRNRTTPYAFYQFWLNVSDDDAERYIKIFTSLERDVIEALIEEHRQDPGRRV 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISISK 343
            +K +A E+TTMVH RE+ + A  A+   F                +     +P   + K
Sbjct: 299 LQKRLAEEVTTMVHSREDLDMAIAASNILFGKATKDSLAQLDEATLNDVFADVPHYDLDK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             +  G   + L    G     S  E R+ +K   + +N   ++     I   D      
Sbjct: 359 SLL--GQTAVDLFCSEGMDIFPSKGEMRKLVKGGGVSLNKEKLAAFDRPITADDLIDGKY 416

Query: 402 IKLSFGKKNHIICH 415
           + +  GKKN+ +  
Sbjct: 417 LLVQRGKKNYYLLT 430


>gi|259048229|ref|ZP_05738630.1| tyrosine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035290|gb|EEW36545.1| tyrosine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 421

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 215/421 (51%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q+++   L  L ++  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDDLEWRGAINQMTDEEGLRALTNEKAVSLYCGVDPTGDSMHIGHLIPFMILRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALM 125
           GHKP+ L+GG T  IGDPS R   R +   +++Q N+EK+       F      +    +
Sbjct: 62  GHKPVILIGGATGSIGDPSGRTSERVLQSMEQVQHNVEKLTAQMKKLFFTTDEDQATLRL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF+
Sbjct: 122 VNNYDWTKDLSLLDFLRDYGKHFNLNTMLAKDVVASRL--EVGISFTEFSYQILQSMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L K  D ++Q+GG+DQWGNI  G++L  +++  +   + LT PL+  + GTK GK+  G
Sbjct: 180 HLFKTEDVQVQIGGADQWGNITSGLELIRKVEGAESRAYGLTIPLMLKSDGTKFGKSAGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N DD DV+ + K  T L   EI+             EA+  
Sbjct: 240 AVWLDPEKTTPYEFYQFWLNQDDRDVIKYIKYFTFLDREEIEALEEKVATEPHKREAQIR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTL 355
           +A E+T  VHG +  E A       F  ++       I        + +       L T 
Sbjct: 300 LAEEVTRFVHGEKALEDAKKITNALFTGNVQQLTADEIEQGFKNMPTFESSKEPQNLATW 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G   S  ++R  +++ AI IN   +++ + +   +       + +  GKK + +  
Sbjct: 360 LVDLGIEPSRRQSREDIQNGAISINGEKVTDLEFEWTKEQSFEERFVIVRRGKKKYFLVV 419

Query: 416 L 416
           L
Sbjct: 420 L 420


>gi|298206911|ref|YP_003715090.1| tyrosyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849545|gb|EAP87413.1| tyrosyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 431

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 150/434 (34%), Positives = 233/434 (53%), Gaps = 23/434 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++F++ ++ RG +H +    E      +    AYIG+D TA SLH G L Q+++L   
Sbjct: 1   MKTNFVAEMTWRGMLHDVMPGTE--EQLLKEPTAAYIGFDPTADSLHIGSLVQIVILMHY 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q+ GH PI+L+GG T +IGDPS +   R ++  + + +N+  IK   S F+ +    +  
Sbjct: 59  QRAGHIPIALVGGATGMIGDPSGKSAERNLLDEEALAKNVAGIKEQLSRFLDFSENSENK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQ 180
           A ++NN  W+    +I+  R+IG   +VN M++ +SV+ RL  E    +SF EF Y + Q
Sbjct: 119 AELVNNYDWMKDFSFIEFARDIGKHITVNYMMAKDSVKKRLSSESTVGMSFTEFTYQLFQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +C LQ+GGSDQWGNI  G +L  R+   K +A+TSPLLT A GTK GKT
Sbjct: 179 GYDFLHLYREKNCLLQLGGSDQWGNITTGTELVRRVAGGKAYAMTSPLLTKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G +WL+K  TSPY F+QYW N  D D  +F K  T L   EI    +   +   +   
Sbjct: 239 EGGNVWLDKNRTSPYKFYQYWVNATDEDAENFIKIFTFLSQEEISELVLKHNEAPHLRLL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKD 344
           +K +A  +T MVHG+E+ + A  A+   F  +                 + +    ISK 
Sbjct: 299 QKTLAEHVTKMVHGQEDLDNAIKASQVLFSKTFKNDISQLDEATFLDVFEGVSQTEISKA 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++  +  +  F  S  EARR LK+N++ +N   ++ E   +   D  +   + 
Sbjct: 359 KLEEGLDMIAALSAETNFLKSNGEARRALKANSVAVNKEKVT-EAYTLTTDDIINDNYVI 417

Query: 404 LSFGKKNHIICHLC 417
           L+ GKKN  I  + 
Sbjct: 418 LNVGKKNTYILKVS 431


>gi|197105298|ref|YP_002130675.1| tyrosyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196478718|gb|ACG78246.1| tyrosyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 418

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 203/414 (49%), Positives = 284/414 (68%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PAFKS+FL  L  RG+IHQIS+P+ELD   + GV+ AYIG+D TA+SLH G L Q+M+L 
Sbjct: 4   PAFKSEFLKTLQARGYIHQISHPQELDEATAGGVIAAYIGFDATATSLHVGSLIQIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKP+ LMGGGT+ +GDPS RDESR+M+   +I+ NI  I+ +F  F+ +G G T
Sbjct: 64  RLQQAGHKPVVLMGGGTTKVGDPSGRDESRKMLTDADIERNIAGIRTVFEKFLTFGNGPT 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M+NN+ WL  + Y++ LRE G  F+VNRML+F+SVR RL+REQ L+FLEFNYM++QA
Sbjct: 124 DAVMVNNDAWLSKLGYLEFLREYGPHFTVNRMLTFDSVRLRLEREQPLTFLEFNYMLMQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF  L +    +LQMGGSDQWGNII G++L  R+     FALT+PLLTT+SG KMGKT 
Sbjct: 184 VDFRHLNRTMGVQLQMGGSDQWGNIINGVELVRRMDQKAAFALTTPLLTTSSGAKMGKTA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN ++ SPY++WQ+WRN +DADV  F +  T LP+ EI R+  L+G +IN+AKK+
Sbjct: 244 QGAVWLNADLLSPYDYWQFWRNTEDADVGRFLRLFTDLPLDEIARLEALEGAQINDAKKV 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M+HG E A  A  AA   F+    S  +PT  +++ +++ G+ L  L   AG 
Sbjct: 304 LANEATRMLHGEEAARAAEAAARAAFEEGRLSGDLPTHEVARADLAAGIALAALAADAGL 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A+S  EARR  +   +++N++  ++    +   D      +KL+ GKK  ++  
Sbjct: 364 ASSRGEARRLAQGGGLRVNDAQETDGARLVSEADLVDG-VVKLAAGKKKIVLVK 416


>gi|254228073|ref|ZP_04921503.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262395949|ref|YP_003287802.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151939569|gb|EDN58397.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262339543|gb|ACY53337.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 419

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 151/420 (35%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   
Sbjct: 1   MTTPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ I+L+GG T +IGDPSF+   R +   + +   +  +       + +       
Sbjct: 60  QDAGHQAIALIGGATGMIGDPSFKATERSLNSKEIVSGWVNDLSNQIQQLMNHQLA-KPM 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
           +M+NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+  +Q +SF EF+Y +LQ+Y
Sbjct: 119 IMVNNADWMKAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + YDCRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + G+K GKT  
Sbjct: 179 DFAELNRQYDCRLQIGGNDQWGNIVGGIDLTRRQNGEQVFGLTLPLITKSDGSKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       +   +A++
Sbjct: 239 GAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----GLLTL 355
           I+A E+T  VHG E    A       F  ++    +  +   + +    +      L+ L
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNMQQLSLGELKQLELDGLPSIESAQQDLVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V++G A+S   AR H+ +NAI +N   +S +   +    F       L  GKK+  +  
Sbjct: 359 LVESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLF--DQYWLLQRGKKHFCLVK 416


>gi|329940721|ref|ZP_08290001.1| tyrosyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329300015|gb|EGG43913.1| tyrosyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 423

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 137/423 (32%), Positives = 214/423 (50%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGQIGDPRP-TAERTLNSPETVAGWVERLRGQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C +Q GGSDQWGN+  G+DL  R      + A  +PL+T A GTK GKT  G
Sbjct: 179 LELYRRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDAAVHAYATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP-MSEIDRMAKLQGKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+  + + L+        +   + + +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISGYLRILSFKSREELEELERQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVSRGMGLLTL 355
             E  T +    E   A  AA +          +           +   +V     ++ L
Sbjct: 299 LAEELTALVHGPEQAAAVIAASKALFGQGELTGLDEATLAAALSELPHVKVGELAPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G A S + ARR +K     +NN  ++ E      +D      + L  GK+N     
Sbjct: 359 FAEVGLAPSKSAARRTVKEGGAYVNNVKVAAEDAVPAAEDLLHGRWLVLRRGKRNLAAVE 418

Query: 416 LCG 418
             G
Sbjct: 419 YTG 421


>gi|325265775|ref|ZP_08132462.1| tyrosine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982758|gb|EGC18383.1| tyrosine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 432

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 151/430 (35%), Positives = 229/430 (53%), Gaps = 21/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L  RG I Q ++ +EL  L  Q  +T Y G+D TA SLH GHL  +++L   Q
Sbjct: 1   MNALLQDLQARGLIAQSTDIQELSQLLDQERITLYCGFDPTADSLHIGHLLPVLVLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDPSF+   R +   + +   +E I+     F+K+  G+  A+
Sbjct: 61  NAGHTPVALVGGATGMIGDPSFKAAERSLNTPETVAGWVESIRNQLKPFLKFD-GENPAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYD 183
           M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ + +Q +SF EF+Y +LQ YD
Sbjct: 120 MENNANWFGSMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T + GTK GKT  G
Sbjct: 180 FAELNKRHNVQLEIGGSDQWGNITWGTETTRRLNGKTVHGMTLPLVTKSDGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
           A+WL+ + TSPY F+Q+W  + DADV  F K  T L + +I ++        +  EA++I
Sbjct: 240 AVWLDAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEQIVQIEADDKASGKKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T ++HG    E A       F              +    +    VS    ++ +
Sbjct: 300 LAEEMTRLIHGEAALEAAQRITHSLFSGDESSLTEQDYAQLALDGLPCITVSGSPNVVEV 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNS-IIS----------NEKLQIKLQDFDSTGNIKL 404
           +VKAG A S  EAR  ++S A+ +N    +           ++K  +            +
Sbjct: 360 LVKAGLAQSNKEARGFVQSGAVLLNGEAAVENNPDFAPEKPDDKYALTDAHKRFGKYTII 419

Query: 405 SFGKKNHIIC 414
             GK+NH + 
Sbjct: 420 KRGKRNHALL 429


>gi|153832312|ref|ZP_01984979.1| tyrosyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871623|gb|EDL70478.1| tyrosyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 418

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 151/416 (36%), Positives = 223/416 (53%), Gaps = 12/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q S+  ++  L S    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 3   LIEDLQARGLIAQASDLDQVQQLLST-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +   + +   ++ +       +         +M+N
Sbjct: 62  HQAIALIGGATGMIGDPSFKATERSLNSEETVTGWVQDLSNQIQQLM-NKQVSKPMIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R++G  FSVN M+S ESV+ RL+  +Q +SF EF+Y +LQ+YDF E
Sbjct: 121 NADWVKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 181 LNRLYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W + +DADV  F +  T L   EI  +     + K   +A++I+A 
Sbjct: 241 LDPSKTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAIEAQDKESKGKPQAQRILAE 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKDEV----SRGMGLLTLIVKA 359
           ++T  VHG E    A       F  ++    +  +  +  D +    S    L+ L+V++
Sbjct: 301 QMTRFVHGEEGLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLVES 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S   AR  + +NAI +N   +  E   +    F       L  GKK+  +  
Sbjct: 361 GLANSKRIARELIGNNAISVNGEKVDAENPSLNFPLF--DQYWLLQRGKKHFYLVK 414


>gi|281424608|ref|ZP_06255521.1| tyrosine--tRNA ligase [Prevotella oris F0302]
 gi|281401279|gb|EFB32110.1| tyrosine--tRNA ligase [Prevotella oris F0302]
          Length = 443

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 138/437 (31%), Positives = 222/437 (50%), Gaps = 27/437 (6%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
               +F+  L  RG + QI    E        +V+AY+G D TA SLH GHL  +M+L  
Sbjct: 10  DMAKNFVEELKWRGMLAQIMPGTE--EYLQSNMVSAYLGTDPTADSLHIGHLCGIMMLRH 67

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKT 121
           LQ+ GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ +      
Sbjct: 68  LQRCGHKPYLLVGGATGMIGDPSGKSQERNLLDTKTLYHNQEAIKKQVAKFLDFDGNEPN 127

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMIL 179
            A ++NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +L
Sbjct: 128 KAELVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLL 187

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKM 237
           Q YDF+ L +++  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K 
Sbjct: 188 QGYDFLYLYQHHGVRLQLGGNDQWGNMTTGTELIRRTLGNEAEAFCLTCPLITKADGRKF 247

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GKT SG +WL++  T+PY F+Q+W N+ D+D   + K  T L    ID +     ++   
Sbjct: 248 GKTESGNVWLDRNRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKETIDALIADHQQDPGR 307

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISI 341
              +K +A E+TTMVH +E+ + A  A+   F                +   + +P  ++
Sbjct: 308 RILQKRLAEEVTTMVHSKEDLDMAIAASNILFGKATKNSLAQLDEATLNDVFKDVPHYTV 367

Query: 342 SKDEVSRGMGLLTLI--VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            +  +  G   + +    +     S +E R+ +K   + +N   +S     +   D    
Sbjct: 368 DRSLL--GSPAVDVFNQEEMDIFPSKSEMRKLVKGGGVSLNKEKLSAFDQLVTTDDLIDN 425

Query: 400 GNIKLSFGKKNHIICHL 416
             + +  GKKN+ +  +
Sbjct: 426 KYLLVQRGKKNYYLITV 442


>gi|167747098|ref|ZP_02419225.1| hypothetical protein ANACAC_01810 [Anaerostipes caccae DSM 14662]
 gi|317471911|ref|ZP_07931246.1| tyrosyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|167654058|gb|EDR98187.1| hypothetical protein ANACAC_01810 [Anaerostipes caccae DSM 14662]
 gi|316900684|gb|EFV22663.1| tyrosyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 410

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 172/396 (43%), Positives = 242/396 (61%), Gaps = 5/396 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +   IL ERGFI Q ++   L  L  +  VT YIG+D TA SL AGH   +M +  +
Sbjct: 1   MSENVYDILQERGFIAQTTHEE-LRDLLGKEKVTFYIGFDATADSLTAGHFLTVMAMMHM 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI+L+GGGT++IGDPS + + R +M  + I+ N  + K   S FI +      A
Sbjct: 60  QRAGHRPIALLGGGTTMIGDPSGKSDMRNIMTKETIEHNAMRFKEQLSRFISFDND--KA 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  WL  + Y+D LREIG  FSVN+ML+ E  + R+  E+ L+F EFNYM++QAYD
Sbjct: 118 ILENNADWLLDLNYVDFLREIGVHFSVNKMLTAECYKQRM--EKGLTFFEFNYMLMQAYD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C L+MGG+DQW NI+ G DL  R +    F LT  LLT + G KMGKT+SG
Sbjct: 176 FLELNRRYGCTLEMGGNDQWSNILAGADLIRRKEQKNAFGLTLTLLTRSDGVKMGKTMSG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ E TSPY F+QYWRNI+D  V      LT LPM E+ R+  LQ  EIN+AK+++A
Sbjct: 236 AVWLDPEKTSPYEFYQYWRNIEDVKVEECLGLLTFLPMEEVRRLGALQDAEINKAKEVLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T +VHG EEA+KA   A   F     S+  P    SK ++  G+ +LTL+V     +
Sbjct: 296 YEVTKIVHGEEEAKKAQAGAKALFVQGAASEDAPVHEYSKAQLEEGLDILTLLVDTKLCS 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           + ++ARR +    + +N   +++ K      DFD  
Sbjct: 356 TRSDARRTVTQGGVSVNGEKVTDFKQVFTSADFDDK 391


>gi|226312369|ref|YP_002772263.1| tyrosyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226095317|dbj|BAH43759.1| tyrosyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 422

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 215/421 (51%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  ++Q ++   L  L ++  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 4   NIIDELEWREAVNQQTDAEGLRELTNEKAVSLYCGVDPTGDSMHIGHLIPFMVLKRFQLA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R +   ++IQEN++K+            G     ++
Sbjct: 64  GHRPVILIGGATGTIGDPSGRQSERSLQTLEQIQENVDKLTAQMKKLFITE-GDNQIRLV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  E  +SF EF+Y ILQ+ D++ 
Sbjct: 123 NNYDWTHKINVIEFLRDYGKNFSINTMLAKDVVSSRL--ESGISFTEFSYQILQSLDYLH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K+ D +LQ+GGSDQWGNI  G+DL  + +    K F LT PL+  A GTK GKT  GA
Sbjct: 181 LYKHEDVQLQIGGSDQWGNITSGLDLIRKKEGSEAKAFGLTIPLMLKADGTKFGKTAGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L   +I+             EA+K +
Sbjct: 241 IWLDPNKTTPFEFYQFWANTDDRDVVKYLKYFTFLSKEQIEELAEKVQSEPHKREAQKAL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E  E+A       F   I S     I     E+           ++  +
Sbjct: 301 AEEMTRFVHGEELLEQAKRITAALFTGDIKSLSADEIEQGFKEMPTFESTLETKNIVDWL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S  +AR  +   AI +N   +++ +L++          I +  GKKN+ +  L
Sbjct: 361 VEIGIEPSKRQAREDITKGAISMNGERVTDLELEVTPSLAIGGRFIIIRKGKKNYSLVKL 420

Query: 417 C 417
            
Sbjct: 421 S 421


>gi|288800271|ref|ZP_06405729.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332484|gb|EFC70964.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 433

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 141/436 (32%), Positives = 225/436 (51%), Gaps = 27/436 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + Q+    E      +  V+AY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MIKNFVEELKWRGMLAQMMPGTE--EFLMKEKVSAYLGTDPTADSLHIGHLAGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q+ GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ +  +  T 
Sbjct: 59  QRCGHKPYILVGGATGMIGDPSGKSQERNLLDAETLYHNQECIKKQVAKFLDFNASEDTA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A+M+NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AVMVNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+ L +  + +LQ+GG+DQWGN+  G +L  R      + FALT PL+T A GTK G
Sbjct: 179 GYDFLHLYRTNNVKLQLGGNDQWGNMTTGTELIRRTLGNDAEAFALTCPLITKADGTKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--IN 296
           KT SG IWL++  T+PY F+Q+W N+ D D V + K  T+L    I+ +     ++  + 
Sbjct: 239 KTESGNIWLDRNRTTPYKFYQFWLNVSDDDAVKYIKIFTSLEKDVINALIAEHEQDPGMR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISIS 342
             +K +A E+T MVH +E+ + A  A+   F                    + +P   +S
Sbjct: 299 VLQKRLADELTVMVHSQEDLDLAKEASGILFGKGTKESLAKFDDATLLSIFEGVPQFKLS 358

Query: 343 KDEVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           K+ +  G   + L    +     S  E R+ ++   + +N   +      I   D  +  
Sbjct: 359 KEAL--GQPAVELFTSDEVKVFPSKGEMRKLVQGGGVSLNKEKLQAVDQVITTDDLLNGK 416

Query: 401 NIKLSFGKKNHIICHL 416
            + +  GKKN+ +  +
Sbjct: 417 YLLVQRGKKNYYLITV 432


>gi|229118589|ref|ZP_04247941.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228664781|gb|EEL20271.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 419

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+ SGA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSASGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID             EA+K++
Sbjct: 239 VWLDAEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
             E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 GEEMTKFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  G+KN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGRKNYSLVKL 418


>gi|302550487|ref|ZP_07302829.1| tyrosyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302468105|gb|EFL31198.1| tyrosyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 422

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 133/423 (31%), Positives = 214/423 (50%), Gaps = 11/423 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLFALSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T +IGDP      R +   + +   + K++     F+ +  G+  A+
Sbjct: 61  QAGHRPLALVGGATGLIGDPRP-TAERTLNDPETVTGWVAKLRAQIEPFLTFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTENLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C LQ GGSDQWGN+  G+DL  R      + A+ +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDATVHAMATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+  + + L+        +   + + +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISKYMRILSFRSREELEELERQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSRGMGLLTL 355
             E  T +    +   A  AA +          +           +   +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASKALFGQGELAELDEKTLAAALSEVPHIQVAELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNVKVAGEDAVPAEEDLLHGRWLVLRRGKKNLAAAE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|229087577|ref|ZP_04219707.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695693|gb|EEL48548.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 420

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 211/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FSVN ML+ + V SRL  +  +SF EF Y ILQ+ DF  
Sbjct: 121 NNYDWTHQINIIEFLRDYGKNFSVNSMLAKDIVASRL--DTGISFTEFTYQILQSMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GGSDQWGNI  G+DL  R      K+F LT PLL  + GTK GKT  GA
Sbjct: 179 LYKEEGVQLQIGGSDQWGNITSGLDLIRRLEGPEAKVFGLTIPLLLKSDGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID   +         EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKFFTFLTKDVIDELAVKVQAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
             E+T  VHG +   +A       F   I S     I     ++           ++  +
Sbjct: 299 GEEMTKFVHGEDAFLQAIKITEALFSGDIKSLTADEIEQGFKDMPTFHAPKESKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + + +      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAILMNGDKVTDVSTDVTVDNSFDGRFIIIRKGKKNYSLVKL 418


>gi|297587828|ref|ZP_06946472.1| tyrosine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574517|gb|EFH93237.1| tyrosine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 415

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 168/411 (40%), Positives = 253/411 (61%), Gaps = 5/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  
Sbjct: 10  NVYDELVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAH 69

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G     A + 
Sbjct: 70  GHIPICLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFGED--KAYIE 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL ++ ++D +REIG  FSVN+ML+ ES ++R+  ++ L+F EF+YM++Q+YD++ 
Sbjct: 128 NNKNWLLNLNFLDFMREIGVHFSVNQMLTLESYKNRM--KKGLTFFEFSYMLMQSYDYLV 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+W
Sbjct: 186 LYRKYGCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++  T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G +IN+AK+++A E+
Sbjct: 246 LDENKTTPYDLFQYMRNVDDRDVEKFLLMLTFLPTEECKRLGSLEGSDINKAKEVLAFEV 305

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             +VHG E+AE+A   A   F+ +   ++MPT  +   +   G+GLL L+   G   S +
Sbjct: 306 CKLVHGEEKAEEARQTANALFNSNAVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNS 365

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EARR +  N I +N+   S+ K  + + DF+    + +  GKK +    L 
Sbjct: 366 EARRLVTQNGISVNDKKESDPKRIVTIHDFNDD-ELIIKKGKKVYHRVKLV 415


>gi|257056540|ref|YP_003134372.1| tyrosyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256586412|gb|ACU97545.1| tyrosyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 424

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 144/424 (33%), Positives = 230/424 (54%), Gaps = 13/424 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
                L  LS RG I Q ++   L      G +  Y G+D TA SLHAGHL Q+++L   
Sbjct: 1   MSEHILDELSWRGLIAQSTDLDALRRDLDSGPLAVYAGFDPTAPSLHAGHLVQMLMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+P+ L GGGT +IGDP      R +   ++++E  ++++G  + F+ +       
Sbjct: 61  QDAGHRPVLLAGGGTGLIGDPRDVG-ERVLHSEEQVREWADRLRGQLARFVDFDHPDVPP 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           + +NN  WL S+     LR++G  FS+N ML+ E+V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 120 IEVNNLDWLGSMTVPTFLRDVGKHFSINTMLARETVKRRLEGD-GISYTEFSYMLLQAAD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           + EL + Y+ RLQ+GGSDQWGNII G+DL  R+   ++ ALT+PL+T + G K+GK+   
Sbjct: 179 YRELFERYNVRLQVGGSDQWGNIIAGVDLIRRVHGAQVHALTTPLITDSEGRKLGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           G +W++ EMTSPY ++QY+ N+ DADVV   K LT L   EI  +     +     +A++
Sbjct: 239 GNVWVDPEMTSPYAWYQYFLNVPDADVVRCLKLLTFLDADEIGELETATNERPAARQAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGL 352
            +A E+T +VHG E+  +   A+   F      +         M  +   +  ++    +
Sbjct: 299 RLAQELTDLVHGPEQTRQVVAASQALFGRGDLRELDAATLDAAMAEVPTGEVRLADEPTI 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V  G   S   ARR +K     +NN+ I+ E  + +  D      + +  GK+   
Sbjct: 359 VELLVAGGLVESKGAARRTVKEGGAYVNNTKITEEDWKPEPSDVLHGHWLVVRRGKRTLA 418

Query: 413 ICHL 416
              +
Sbjct: 419 GVRV 422


>gi|317124689|ref|YP_004098801.1| tyrosyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588777|gb|ADU48074.1| tyrosyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 420

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 141/413 (34%), Positives = 217/413 (52%), Gaps = 10/413 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D    L  RG + Q ++   L    ++G +T Y G+D TA SLH G+L QL++L   Q
Sbjct: 1   MTDIFDELQWRGLVAQSTDEAALREALAEGPLTLYCGFDPTAPSLHFGNLVQLVVLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH  I L+GG T +IGDP      R +   ++   N+ +IK +   F+ +  G   A+
Sbjct: 61  RAGHHVICLVGGSTGLIGDPRP-TSERVLKTKEQTASNVARIKALVQPFLDFD-GANAAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  W  S+  +D LR++G  F VN+M+  E++ +RL+ ++ +S+ EF+Y +LQA DF
Sbjct: 119 LVDNLDWTASLTALDFLRDVGKHFRVNQMVKKEAISARLESQEGISYTEFSYQLLQALDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C LQ GGSDQWGN+  G+DL  R +   +   T+PLL  + GTK GK+   A
Sbjct: 179 RHLYRTYGCTLQTGGSDQWGNLTAGVDLIHRSEGASVHCFTTPLLVDSGGTKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ +MTSPY+F+QY+ NI+DA VVS  K  T L   EI  + +   +      A+K +
Sbjct: 239 VWLSADMTSPYSFYQYFLNIEDASVVSMLKVFTDLGQDEIAELERQVKEEPFRRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A +ITT+VHG +       A+   F                T  +    +  G   +  +
Sbjct: 299 AGDITTLVHGADATAAVQAASEALFGKGELHGLDASTLTDATAELPGARIEVGTSFVDAL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V AG   S N ARR +      +NN  +S+    +   DF       L  G+K
Sbjct: 359 VAAGLVDSRNAARRAIADGGASLNNVKVSDPDRILGDDDFLHGTVAVLKRGRK 411


>gi|308094994|ref|ZP_05893140.2| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308092687|gb|EFO42382.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
          Length = 435

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   
Sbjct: 17  MTTPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRF 75

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +       
Sbjct: 76  QDAGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLS-KPM 134

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
           +M+NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+  +Q +SF EF+Y +LQ+Y
Sbjct: 135 IMVNNADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSY 194

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  
Sbjct: 195 DFAELNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEG 254

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       +   +A++
Sbjct: 255 GAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQR 314

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----GLLTL 355
           I+A E+T  VHG E    A       F  ++    +  +   + +    +      L+ L
Sbjct: 315 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQDLVEL 374

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++++G A+S   AR H+ +NAI +N   +S +   +    F       L  GKK+  +  
Sbjct: 375 LIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLF--DQYWLLQRGKKHFCLVK 432


>gi|315607059|ref|ZP_07882063.1| tyrosine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251113|gb|EFU31098.1| tyrosine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 433

 Score =  354 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 142/435 (32%), Positives = 221/435 (50%), Gaps = 27/435 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + QI    E     ++ +V+AY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MMKNFVEELKWRGMLAQIMPGTE--EYLNEHLVSAYLGTDPTADSLHIGHLCGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q+ GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ + +     
Sbjct: 59  QRCGHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQAAKFLDFDSDEPNK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A M+NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ
Sbjct: 119 AEMVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K G
Sbjct: 179 GYDFLYQYQHYGVRLQLGGNDQWGNMTTGTELIRRTLGADAEAFCLTCPLITKADGKKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           KT SG +WL++  T+PY F+Q+W N+ D D   + K  T+L    I+ + +   ++    
Sbjct: 239 KTESGNVWLDRNRTTPYAFYQFWLNVSDDDAERYIKIFTSLERDVIEALIEEHRQDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISIS 342
             +K +A E+TTMVH RE+ + A  A+   F                +     +P   + 
Sbjct: 299 VLQKRLAEEVTTMVHSREDLDMAIAASNILFGKATKDSLAQLDEATLNDVFADVPHYDLD 358

Query: 343 KDEVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           K  +  G   + L          S  E R+ +K   + +N   ++     +   D     
Sbjct: 359 KSLL--GQTAVDLFCSEDMDIFPSKGEMRKLVKGGGVSLNKEKLAAFDRPVTADDLIDGK 416

Query: 401 NIKLSFGKKNHIICH 415
            + +  GKKN+ +  
Sbjct: 417 YLLVQRGKKNYYLLT 431


>gi|73666688|ref|YP_302704.1| tyrosyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|97201350|sp|Q3YT49|SYY_EHRCJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72393829|gb|AAZ68106.1| tyrosyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 418

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 199/414 (48%), Positives = 278/414 (67%), Gaps = 1/414 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             +S FLS L  RG+ +Q +N   LD L S+  V  YIG+D TA SLH G L Q+M+L +
Sbjct: 2   KLESQFLSFLYSRGYFNQCTNVSALDQLMSKQCVPTYIGFDCTAKSLHVGSLVQIMILRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHKPI L+G GT+ IGDPS +D+SR M+ S EI+EN   I  +   FIK+G+G TD
Sbjct: 62  LQKFGHKPIVLLGNGTTKIGDPSGKDKSRTMLCSDEIEENALGIYDVLKKFIKFGSGSTD 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            L++ N  WL  + YI+ LR IG  FSVN ML+F+SVR RL+REQ+LSFLEFNYM+LQ+Y
Sbjct: 122 GLLVCNAEWLDDLNYIEFLRNIGRHFSVNNMLTFDSVRLRLEREQNLSFLEFNYMLLQSY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + Y+C LQ+GGSDQWGNI+ G++LG +L+  +LF LT+ L+ T+SG KMGKT  
Sbjct: 182 DFVELNRRYNCLLQIGGSDQWGNIVSGVELGRKLQLSELFGLTTNLVLTSSGEKMGKTAQ 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +M SP ++WQY+RN+ D DV  F K  T LP+ +I  +  LQG EINEAKK++
Sbjct: 242 GAVWLNGDMYSPVDYWQYFRNVRDEDVGRFLKLFTELPLDKIKELELLQGHEINEAKKML 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG E A+  A  A++ F+ +     + T  + + +V  G+ ++ L+  +G  
Sbjct: 302 ATEATKICHGEEIAKNIAADALKVFECNDD-SGLSTFYVDRCDVDLGLPIIKLLQISGLE 360

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            S++ ARR +     KIN+ ++ +   ++ L+ F +   +KLS GKK H+   L
Sbjct: 361 KSSSSARRLINDKGCKINDVVVLDVNYKLSLEHFCNASYVKLSCGKKRHLKIML 414


>gi|257439744|ref|ZP_05615499.1| tyrosine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197764|gb|EEU96048.1| tyrosine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 405

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 172/410 (41%), Positives = 251/410 (61%), Gaps = 8/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   LYEELQARGLVAQITDNEIID-LINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  G   ALMLN
Sbjct: 62  NKPIALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSEG--KALMLN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 120 NADWLLNLNYVELLRDVGACFSVNNMLRAKRYEQRM--EKGLSFLEFNYMIMQSYDFYYM 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 178 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T
Sbjct: 238 DPNKTSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAYELT 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG EEAEKA  AA   F  +  ++HMP+  +++ +++ G +G+LTL+VKAG A S  
Sbjct: 298 KMVHGEEEAEKAQNAARALFSGAADTEHMPSTQLTEADLTDGSIGILTLMVKAGLAASNG 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR +    + ++   ++   +        +   I +  GKK +    L
Sbjct: 358 EARRLVVQGGVLVDGEKVAAPTVSFTADQLKNG--IVIKKGKKIYHKVTL 405


>gi|91216088|ref|ZP_01253056.1| tyrosyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91185605|gb|EAS71980.1| tyrosyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 431

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 148/432 (34%), Positives = 229/432 (53%), Gaps = 23/432 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K+DF+  ++ RG IH +          ++    AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MKNDFIEEVTWRGMIHDVMPGT--QDHLNESPRAAYVGIDPTADSLHIGHLVSVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q  GHKP++L+GG T +IGDPS + + R ++    ++ N   +K   S F+++       
Sbjct: 59  QLAGHKPVALVGGATGMIGDPSGKSQERNLLDEATLRHNQNALKAQLSKFLEFDAKEDNS 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQ 180
           A+++NN  W+    ++D +R++G   +VN M+S ESV+ R   + ++ +SF EF Y ++Q
Sbjct: 119 AILVNNYDWMKDFSFLDFIRDVGKHITVNYMMSKESVKKRLSSESKEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +   C LQMGGSDQWGNI  G +L  R+   K FALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLYRTQKCTLQMGGSDQWGNITTGTELIRRIDQGKGFALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
            +G IWL+ + TSPY F+QYW N  D D   F K  T L   EI        +   + + 
Sbjct: 239 ATGNIWLDPKKTSPYKFYQYWINTSDEDAEIFIKIFTFLSQKEISDLVNTHKEQPHLRQL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +  +A EIT  VH ++  +KA  A+   F  S                 + +P   +SK+
Sbjct: 299 QSRLADEITAAVHSKKGLDKAKEASQVLFGKSTEEDLAKLDEATFLDVFEGVPLKELSKE 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            ++    ++  +  +  F +S  EARR LK N+I +N S +      +  +D  +   + 
Sbjct: 359 ILNDNFDMIAALSAETEFLSSNGEARRALKENSISVNKSKV-GLDYTLTEKDLINGKYVL 417

Query: 404 LSFGKKNHIICH 415
           ++ GKKN  +  
Sbjct: 418 INKGKKNTYLIK 429


>gi|23335281|ref|ZP_00120518.1| COG0162: Tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189439665|ref|YP_001954746.1| tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213692733|ref|YP_002323319.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227546218|ref|ZP_03976267.1| tyrosine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239622221|ref|ZP_04665252.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296453812|ref|YP_003660955.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312133067|ref|YP_004000406.1| tyrs [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481829|ref|ZP_07940857.1| tyrosyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322688773|ref|YP_004208507.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322690764|ref|YP_004220334.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|254783569|sp|B3DSX9|SYY_BIFLD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783570|sp|B7GTN2|SYY_BIFLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189428100|gb|ACD98248.1| Tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213524194|gb|ACJ52941.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227213199|gb|EEI81071.1| tyrosine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239514218|gb|EEQ54085.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296183243|gb|ADH00125.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|311774060|gb|ADQ03548.1| TyrS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916766|gb|EFV38160.1| tyrosyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455620|dbj|BAJ66242.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320458891|dbj|BAJ69512.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320460109|dbj|BAJ70729.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 440

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 137/422 (32%), Positives = 213/422 (50%), Gaps = 20/422 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ 
Sbjct: 13  NTLLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQL 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP  +   R +     +    +++K      +    G      
Sbjct: 73  AGHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWADRLKNQIGGILDTE-GANAVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+   A+
Sbjct: 191 HLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKSEGNAV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R            EA+K +A
Sbjct: 251 WLDATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKREAQKTLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE----------------VS 347
            E+T+ VHG    + A  A+   F    + + +   ++                      
Sbjct: 311 WEVTSFVHGEAATQAAIDASGALFGRGGNLEDIDEETLESVLDGFKVVDENGEHVFPVSK 370

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  ++     AG   S +EARR +KS  + +NN+ I +E+  +   DF +     +  G
Sbjct: 371 PGDRVIDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEADFLAGRFALIRRG 430

Query: 408 KK 409
           KK
Sbjct: 431 KK 432


>gi|225010140|ref|ZP_03700612.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005619|gb|EEG43569.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 431

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 151/431 (35%), Positives = 222/431 (51%), Gaps = 23/431 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++F++ L  RG +H +    E        +  AY+G D TA SLH GHL  +MLL   
Sbjct: 1   MLTNFIAELKWRGMLHDVMPETE--EHLLSEMRAAYMGIDPTADSLHIGHLVGVMLLKHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q  GHKP +L+GG T +IGDPS +   R ++    ++ N   +K   S F+ + +     
Sbjct: 59  QIAGHKPYALIGGATGMIGDPSGKSNERNLLDEATLRHNQAALKEQLSRFLDFDSEVSNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A+++NN  W+    ++  +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q
Sbjct: 119 AVLVNNYDWMKDFSFLSFIRDVGKHITVNYMMAKDSVKKRLSSEAAEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L KN+ C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLYKNFQCTLQMGGSDQWGNITTGTELIRRIGGGKGYALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G IWL+   TSPY F+QYW N  D D   + K  T L    I +      +   +   
Sbjct: 239 EGGNIWLDANRTSPYVFFQYWLNTSDVDAEKYIKIFTLLDQETIAKLVSDHQEAPHLRLL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSI--------------HSQHMPTISISKD 344
           +K +A E+TT VHG E  E A  A+   F  +                 + +P   +   
Sbjct: 299 QKNLAKEVTTAVHGSEAYENALKASDILFGKTTADVVKTLDTQTFLAVFEGVPQAVLPFS 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            +  G+ ++  +  + GF  S  +ARR LK NAI +N   +  E   I  +D      + 
Sbjct: 359 NLVNGLDMIAALSAETGFLKSNGDARRELKQNAISVNKEKV-GETYLISQKDLIDQKYVL 417

Query: 404 LSFGKKNHIIC 414
           L  GKKN+ I 
Sbjct: 418 LQRGKKNYFIL 428


>gi|116492043|ref|YP_803778.1| tyrosyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266493|sp|Q03HI6|SYY_PEDPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116102193|gb|ABJ67336.1| tyrosyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 417

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 222/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG ++Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ 
Sbjct: 2   NIIDELTWRGAVNQQTDEEGLKKLTDEKKIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS +   R +   +++  N E +K     F     G  +  M+
Sbjct: 62  GHKPVILIGGGTGSIGDPSGKKSERVLQTMEQVHHNEEALKSQMVKFF----GTDNFRMV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L KN D +LQ+GG DQWGNI  G DL  R+  +  K++ LT PLL  A GTK GK+  G 
Sbjct: 176 LYKNEDVQLQIGGGDQWGNITAGTDLIHRMEGQEAKVYGLTIPLLLKADGTKFGKSEGGN 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV F K  T L   EI+R         E  EA++ +
Sbjct: 236 VWLDAEKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+T+ VHG    E+A   +   F   +            ++MP++ +   + +  + L
Sbjct: 296 AEEVTSFVHGDAAVEEAQHISAALFSGEVKDLTASEIEQGFKNMPSVDVENKKENIVLWL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +         +S  +AR  +++ AI+IN   +++   +I          + +  GKK + 
Sbjct: 356 VD---TTKIESSRRQAREDIQNGAIRINGEKVTDVNAEIDPASNFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|59800530|ref|YP_207242.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA 1090]
 gi|194097676|ref|YP_002000716.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae NCCP11945]
 gi|240013380|ref|ZP_04720293.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae DGI18]
 gi|240015823|ref|ZP_04722363.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA6140]
 gi|240112169|ref|ZP_04726659.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae MS11]
 gi|240114915|ref|ZP_04728977.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID18]
 gi|240120452|ref|ZP_04733414.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID24-1]
 gi|240122752|ref|ZP_04735708.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID332]
 gi|240127455|ref|ZP_04740116.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|254492974|ref|ZP_05106145.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|260441270|ref|ZP_05795086.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae DGI2]
 gi|268598226|ref|ZP_06132393.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268600572|ref|ZP_06134739.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268681354|ref|ZP_06148216.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268685831|ref|ZP_06152693.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044618|ref|ZP_06570327.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293397737|ref|ZP_06641943.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|75356465|sp|Q5FAF7|SYY_NEIG1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783619|sp|B4RP13|SYY_NEIG2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|59717425|gb|AAW88830.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA 1090]
 gi|193932966|gb|ACF28790.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae NCCP11945]
 gi|226512014|gb|EEH61359.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268582357|gb|EEZ47033.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268584703|gb|EEZ49379.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268621638|gb|EEZ54038.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626115|gb|EEZ58515.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291011512|gb|EFE03508.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291611683|gb|EFF40752.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 431

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 154/428 (35%), Positives = 223/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI--DRMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EI              EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIGVVEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+  +  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDAYLLIGEYKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|282859934|ref|ZP_06269022.1| tyrosine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587337|gb|EFB92554.1| tyrosine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 432

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 140/435 (32%), Positives = 222/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + Q+    E      + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELRWRGMLAQMMPGTE--EFLMKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  T    A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDSTEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   ++Y+ +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GK
Sbjct: 179 YDFLYQYQHYNIKLQLGGNDQWGNMTTGSELIRRTLGSEAEAYCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINE 297
           T SG IWL++  TSPY F+Q+W N+ D D   + K  T    P  E       +      
Sbjct: 239 TESGNIWLDRNRTSPYAFYQFWLNVSDDDAAKYIKIFTSLDRPTIEGLIAEHSEDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISISK 343
            ++ +A E+T MVH +E+ + A  A+   F                +   + +P   +SK
Sbjct: 299 LQRRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFNDVFKDVPHFEVSK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + +  G   + ++ + G     S +E R+ +K   + +N   ++     I   D      
Sbjct: 359 ELL--GQPAVEIMNQEGMTIFPSKSEMRKLVKGGGVSLNKEKLAAFDQVITADDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQKGKKNYFLIIV 431


>gi|119716211|ref|YP_923176.1| tyrosyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536872|gb|ABL81489.1| tyrosyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 423

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 217/420 (51%), Gaps = 15/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I   ++   L    + G V  Y+G+D TA SLH G+L Q++    LQ+ G
Sbjct: 7   LLDDLEWRGLIAHSTDLDALREALAGGSVRFYVGFDPTAPSLHLGNLVQILTAKRLQEAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P +L+GG T +IGDP      R +     ++E +E+++     F+ +  G   A M+N
Sbjct: 67  HTPYALVGGATGMIGDPKE-SGERTLNSLDTVKEWVERVRRQIEPFLSFE-GANAATMVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR+IG  F VNRMLS + VRSRL  +  +S+ EF+Y++LQ+ DF+ L
Sbjct: 125 NYDWTASLSTIDFLRDIGKHFPVNRMLSRDVVRSRL--DAGISYTEFSYVLLQSMDFLNL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +++   LQ GGSDQWGN+  G++L  R    K  A  +PL+T A GTK GKT  GA+WL
Sbjct: 183 YRDHGVVLQFGGSDQWGNLTGGVELIRRAAGGKAHAFATPLITKADGTKYGKTEGGALWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           + EM SPY F+Q+W N++D  V    +  T LP +EI+       +   +   ++ +A  
Sbjct: 243 DPEMMSPYAFYQFWLNVEDEKVGELLRVFTFLPRAEIEALEAEHAEKPFLRAGQRALAEH 302

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SISKDEVSRGMGLLTLI 356
           +TT+VHG EE E+   A+   F     +               S S D       ++ L+
Sbjct: 303 VTTLVHGAEETERIRAASAALFGGGDLTTLSAATLGAALREAGSASVDGDEDLPTVVDLL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G A S  +ARR +      +NN+ + +       +D      + L  GKKN     +
Sbjct: 363 VATGLAKSKGDARRTVTEGGAYLNNARVEDPDHVPAPEDLIDGTWLVLRRGKKNFAGVEV 422


>gi|239998197|ref|ZP_04718121.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae 35/02]
 gi|240124945|ref|ZP_04737831.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268594051|ref|ZP_06128218.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268683524|ref|ZP_06150386.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268547440|gb|EEZ42858.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268623808|gb|EEZ56208.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|317163484|gb|ADV07025.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 431

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 154/428 (35%), Positives = 223/428 (52%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   SVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M 
Sbjct: 62  GHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSFE-GGNAAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ YDF 
Sbjct: 121 NNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+
Sbjct: 181 ELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI--DRMAKLQGKEINEAKKIIA 303
           WLN + TSPY F+Q+W  + DADV  F K  T L + EI              EA++I+A
Sbjct: 241 WLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIGVIEAKDKASGSKPEAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+  +  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDAYLLIGEYKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|238897878|ref|YP_002923557.1| tyrosine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259517002|sp|C4K4B6|SYY_HAMD5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|229465635|gb|ACQ67409.1| tyrosine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 424

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 148/420 (35%), Positives = 219/420 (52%), Gaps = 9/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ +  L +RG I Q+++   L     QG ++ Y G+D TA SLH GHL  L+ L   
Sbjct: 2   ISNNLIEQLEQRGLIAQVTDKTRLSERLYQGQISLYCGFDPTADSLHLGHLVPLLCLKRF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKPI L+GG T +IGDPSF+   R++     + + + KI+     F+ +  G   A
Sbjct: 62  QLVGHKPIILVGGATGLIGDPSFKAGERKLNDIDTVHQWVNKIREQVEPFLDFDCGNHSA 121

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
            + NN  W   I  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ+Y
Sbjct: 122 TIENNHNWFSHINVLTFLRDIGKHFSVNQMMNKEAVKQRLSRTDSGISFTEFSYNLLQSY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L KN+   LQ+GGSDQWGNI  GIDL  RL    ++ LT PL+T A G+K GKT  
Sbjct: 182 DFAYLNKNHKVELQIGGSDQWGNITSGIDLTHRLNRRSVYGLTVPLITKADGSKFGKTEG 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
             IWL+ + TSPY F+Q+W N  DADV  F K  T + ++ ID       +  +  +A+ 
Sbjct: 242 NTIWLDAKKTSPYQFYQFWLNTADADVYRFLKLFTFIDLNAIDALEEQDKKNDKAPQAQY 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMS------IHSQHMPTISISKDEVSRGMGLLT 354
           ++A EIT MVHG+E    A       F  +           +    I    +     L  
Sbjct: 302 VLANEITEMVHGKEGLSAAQRITASLFTGNPHDMREEDFSQLAQDGIPIVRLETDAELQK 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V A  A S ++AR  ++S++I +N       +     +D        L  GKK + + 
Sbjct: 362 ALVSAQLAPSRSQARTLIQSSSISVNGKKQLKPEYIFTSEDRLLDRYTLLRRGKKYYCLI 421


>gi|303236124|ref|ZP_07322726.1| tyrosine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483706|gb|EFL46699.1| tyrosine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 432

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 142/435 (32%), Positives = 224/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + QI    E      + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELKWRGMLAQIMPGTE--EFLQKNMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
             GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +       A
Sbjct: 59  LCGHKPYLLIGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDSNEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKEFSFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   + +  +LQ+GG+DQWGN+  G +L  R   +  + F LT PL+T A G K GK
Sbjct: 179 YDFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGQEAEAFCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL++  T+PY F+Q+W N+ D D   + K  T+L  + ID + +   ++     
Sbjct: 239 TESGNIWLDRNRTTPYAFYQFWLNVSDNDAEKYIKIFTSLDKATIDSLIEEHRQDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISISK 343
            ++ +A E+T MVH +E+ + A  A+   F                +   + +P   ISK
Sbjct: 299 LQRRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFNDVFKDVPHYEISK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + +  + G     S +E R+ +K   + +N   +      I  +D      
Sbjct: 359 DLL--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLQAFDQVITAEDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLMQKGKKNYFLVIV 431


>gi|256847595|ref|ZP_05553040.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715284|gb|EEU30260.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 416

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 147/419 (35%), Positives = 215/419 (51%), Gaps = 15/419 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L     ++ Y G D T  SLH GHL   ++L   Q  
Sbjct: 2   DILEDLKWRGAINQCTDLDGLRELLKTKKISLYCGTDPTGDSLHIGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R++  S ++Q N E +            G  +  ++
Sbjct: 62  GHHPYILIGGGTGFIGDPSGRKTERQLQTSDQVQHNKEALTKQMIKLF----GTENFKIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  I  +D LR+ G  F+VN MLS E+V SRL  +  +SF EF+Y ILQ+ DF+ 
Sbjct: 118 DNYDWLSKISLLDFLRDYGKSFNVNTMLSKEAVASRL--KNGISFTEFSYQILQSVDFLY 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L    D +LQ+GG+DQWGN+  G+DL   +    K F LT PL+  A GTK GKT  GA+
Sbjct: 176 LNNTEDIQLQIGGADQWGNLTNGVDLIHSKKPNEKAFGLTIPLMLKADGTKFGKTAGGAV 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+ + TSP+ F+Q+W N DD DVV + K  T L   EID          +  EA++ +A
Sbjct: 236 WLDAKKTSPFEFYQFWLNQDDRDVVKYLKYFTFLSHEEIDDLAEKVKTEPQKREAQRRLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEV-SRGMGLLTLIV 357
            E+T  VHG E  ++A   +   F   I    +  +      +   E+ S+ + ++  +V
Sbjct: 296 EEVTKFVHGEEAMKQAEKMSNILFKGDIQDLSVEELKQAFEKVPSVEISSKPVNVIDWLV 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +     S  +AR  + + AI IN   IS+E   +          +    GK+N+ +  +
Sbjct: 356 QIEIEPSKRQAREDVNNGAITINGQKISDESFVVDPSTNFDGQYVVARKGKRNYFLAKV 414


>gi|183982502|ref|YP_001850793.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium marinum M]
 gi|183175828|gb|ACC40938.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium marinum M]
          Length = 430

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 228/432 (52%), Gaps = 16/432 (3%)

Query: 1   MPAFKSD---FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M +  S     L  L  RG I Q ++   L     +  +T Y G+D TA+SLHAGHL  L
Sbjct: 1   MSSNSSGSAGILDELGWRGLIAQSTDLDALAADVQRPPLTVYAGFDPTAASLHAGHLVPL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           + L   Q+ GH+PI L GG T +IGDP      R +  +  +    E+I+G    F+ + 
Sbjct: 61  LALRRFQRAGHRPIVLAGGATGMIGDPRD-IGERSLNDADTVANWTERIRGQLERFVDFD 119

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
              T A++ NN  W  ++  ++ LR++G  FSVN ML  +++R RL+ E  +S+ EF+YM
Sbjct: 120 GSPTGAIVENNLEWTAAMSTVEFLRDVGKHFSVNVMLDRDTIRRRLEGE-GISYTEFSYM 178

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D+VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK 
Sbjct: 179 LLQANDYVELHRRHGCTLQIGGSDQWGNIIAGVRLVRQKSGAAVHALTVPLVTAADGTKF 238

Query: 238 GKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
           GK+   G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +   
Sbjct: 239 GKSTGGGSLWLDPEMTSPYAWYQYFVNTADADVIRYLRWFTFLVAEELTELEQATAERPH 298

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------QHMPTISISKDEV 346
              A++ +A E+TT+VHG    E    A+   F     S          +   SI++ E 
Sbjct: 299 QRAAQRRLAAELTTLVHGEAATEAVEHASRALFGHGELSRLDEATLGAALRETSIAELEP 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
               G++ L+V  G + S   ARR +    + +NN  +  ++   +  DF     + L  
Sbjct: 359 GTPDGIVDLLVATGLSASKGAARRTIGEGGVSVNNIRVETDEWVPQTSDFLHGRWLVLRR 418

Query: 407 GKKNHIICHLCG 418
           GK+N       G
Sbjct: 419 GKRNIAGVERVG 430


>gi|118590759|ref|ZP_01548160.1| Tyrosyl-tRNA synthetase, class Ib [Stappia aggregata IAM 12614]
 gi|118436735|gb|EAV43375.1| Tyrosyl-tRNA synthetase, class Ib [Stappia aggregata IAM 12614]
          Length = 425

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 196/413 (47%), Positives = 272/413 (65%), Gaps = 3/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              KS+ L++L ERG +HQ ++   LD   SQG +TAY G+D TA+SLH GHL  LM + 
Sbjct: 13  TKLKSEALAVLLERGLVHQCTDIEALDQTLSQGPITAYAGFDATAASLHVGHLMPLMTMR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+PI ++GGGTS IGDPSFR ++R M+  ++I  NI  I+      +    G+ 
Sbjct: 73  WLQKLGHRPIVVLGGGTSQIGDPSFRKDARPMLEERQIAANIATIRRSVERLVDMN-GED 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            AL+++N  WL   ++++ LR+ GS F+VNRM++F+SV+SRL  +  L+ LEF YM+LQA
Sbjct: 132 GALLVDNAEWLNEFRFLEFLRDYGSQFTVNRMMTFDSVKSRLDAQMPLTVLEFCYMMLQA 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+ELAK YDC LQ+GGSDQWGNI+ G++LG R     L  LT PLLTTASG KMGKT 
Sbjct: 192 VDFLELAKRYDCSLQVGGSDQWGNIVNGVELGRRDGRK-LHGLTVPLLTTASGAKMGKTA 250

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WL+ E  SP+ FWQ+WRN  DADV    +  T LPMSEI+R+A L+G E+NEAKKI
Sbjct: 251 AGAVWLHPEHLSPFGFWQFWRNTADADVAKCLRLFTELPMSEIERLAALEGAELNEAKKI 310

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +AT++T +VHG EEA  A       F         PT S+    ++ G+GLL L+V  GF
Sbjct: 311 LATQVTAIVHGPEEARGALQQGDALFSGEGEILE-PTHSLPLKTLAEGLGLLELVVAVGF 369

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A+S  EARR ++   +++NN I+ + + +I   D  +   + +S GK+   + 
Sbjct: 370 ASSNGEARRLVEGGGVRLNNQILDDPRRRIATGDLQANDRLSISVGKRRKALI 422


>gi|328956502|ref|YP_004373888.1| tyrosine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328672826|gb|AEB28872.1| tyrosine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 421

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 145/426 (34%), Positives = 217/426 (50%), Gaps = 21/426 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  Q  +  Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDEAGLKKLIDQKKIGLYCGVDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GG T  IGDPS + E R +  S+++Q N +K+     +    G  +    M+
Sbjct: 62  GHRPVIVIGGATGSIGDPSGKSEERVLQTSEQVQNNSDKLSRQMENLFDAGKKEESIRMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  +D LR IG  F+VN MLS + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNLDWTKEISLLDFLRNIGKSFNVNTMLSKDIVASRL--ETGISFTEFTYQILQSIDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GG+DQWGNI  G++   + +    + + LT PL+  A GTK GKT  GA
Sbjct: 180 LYRHEDVQLQIGGADQWGNITAGLEYIRKQEGSEAEAYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E T+PY F+Q+W N DD DVV + K  T L   EI+             EA+K +
Sbjct: 240 IWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLTKEEIEALGEKIAAEPHKREAQKTL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGMGL 352
           A+E+T  VHG +  + A       F                ++MPT   SK+E      +
Sbjct: 300 ASEMTLFVHGEQALKDAEKITAALFSGDVKSLTADQIEEGFKNMPTFESSKEE----RNI 355

Query: 353 LTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  +V   G   S  +AR  + + A+ +N   I++ +  +  ++      I +  GKK +
Sbjct: 356 VEWLVDVVGIEPSRRQAREDINNGALSMNGEKITDVEAIVTPENSFDERFILIRKGKKKY 415

Query: 412 IICHLC 417
            +  L 
Sbjct: 416 FLIKLV 421


>gi|260593358|ref|ZP_05858816.1| tyrosine--tRNA ligase [Prevotella veroralis F0319]
 gi|260534634|gb|EEX17251.1| tyrosine--tRNA ligase [Prevotella veroralis F0319]
          Length = 432

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 140/435 (32%), Positives = 225/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELRWRGMLAQIMPGTE--ELLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           + GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +   +   A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGNEANKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GK
Sbjct: 179 YDFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++     
Sbjct: 239 TESGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDGLIEEHRQDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            ++ +A E+T MVH +E+ + A  A+   F  S                 + +P   +SK
Sbjct: 299 LQRRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + +  + G     S +E R+ +K   + +N   ++     +  +D      
Sbjct: 359 DVL--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTAEDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQKGKKNYSLIIV 431


>gi|269967210|ref|ZP_06181275.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828200|gb|EEZ82469.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 419

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 227/420 (54%), Gaps = 12/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   
Sbjct: 1   MTTPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ ++L+GG T +IGDPSF+   R +   + +   +  +       + +       
Sbjct: 60  QDAGHQAVALIGGATGMIGDPSFKATERSLNSEEIVSGWVNDLSNQIHQLMNH-QLTKPM 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
           +M+NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+  +Q +SF EF+Y +LQ+Y
Sbjct: 119 IMVNNADWMKAINVIDFFRDVGKHFSINTMVNRESVKQRLQRPDQGISFTEFSYALLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  
Sbjct: 179 DFAELNRRYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GA+WL+   +SPY F+Q+W   +DADV  F +  T L   EI  +       +   +A++
Sbjct: 239 GAVWLDPSKSSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQSKPQAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----GLLTL 355
           I+A E+T  VHG +    A       F  ++    +  +   + +    +      L+ L
Sbjct: 299 ILAEEMTRFVHGEDGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQDLVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++++G A+S   AR H+ +NAI +N   ++ +   +    F       L  GKK+  +  
Sbjct: 359 LIESGLASSKRVAREHISNNAISVNGEKVAADNPSLSFPLF--DQYWLLQRGKKHFCLVK 416


>gi|118617300|ref|YP_905632.1| tyrosyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569410|gb|ABL04161.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium ulcerans Agy99]
          Length = 430

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 228/432 (52%), Gaps = 16/432 (3%)

Query: 1   MPAFKSD---FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M +  S     L  L  RG I Q ++   L     +  +T Y G+D TA+SLHAGHL  L
Sbjct: 1   MSSNSSGSAGILDELGWRGLIAQSTDLDALAADAQRPPLTVYAGFDPTAASLHAGHLVPL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           + L   Q+ GH+PI L GG T +IGDP      R +  +  +    E+I+G    F+ + 
Sbjct: 61  LALRRFQRAGHRPIVLAGGATGMIGDPRD-IGERSLNDADTVANWTERIRGQLERFVDFD 119

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
              T A++ NN  W  ++  ++ LR++G  FSVN ML  +++R RL+ E  +S+ EF+YM
Sbjct: 120 GSPTGAIVENNLEWTAAMSTVEFLRDVGKHFSVNVMLDRDTIRRRLEGE-GISYTEFSYM 178

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D+VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK 
Sbjct: 179 LLQANDYVELHRRHGCTLQIGGSDQWGNIIAGVRLVRQKSGAAVHALTVPLVTAADGTKF 238

Query: 238 GKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
           GK+   G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +   
Sbjct: 239 GKSTGGGSLWLDPEMTSPYAWYQYFVNTADADVIRYLRWFTFLVAEELTELEQATAERAH 298

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------QHMPTISISKDEV 346
              A++ +A E+TT+VHG    E    A+   F     S          +   SI++ E 
Sbjct: 299 QRAAQRRLAAELTTLVHGEAATEAVEHASRALFGHGELSRLDEATLGAALRETSIAELEP 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
               G++ L+V  G + S   ARR +    + +NN  +  ++   +  DF     + L  
Sbjct: 359 GTPDGIVDLLVATGLSASKGAARRTIGEGGVSVNNIRVETDEWVPQTSDFLHGRWLVLRR 418

Query: 407 GKKNHIICHLCG 418
           GK+N       G
Sbjct: 419 GKRNIAGVERVG 430


>gi|75411773|sp|Q9EUU8|SYY_MYCFO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|11830856|emb|CAC18748.1| tyrosyl-tRNA synthetase [Mycobacterium fortuitum]
          Length = 428

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 145/429 (33%), Positives = 223/429 (51%), Gaps = 16/429 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
                L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   
Sbjct: 1   MSMGILDELDWRGLIAQSTDRETLANDLANGPMTVYSGFDPTAPSLHAGHLVPLLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP      R +  +  + +   +I+G    F+++    T A
Sbjct: 61  QRAGHRPIVLAGGATGMIGDPRD-TGERTLNTADTVADWAGRIRGQLERFVEFDDTPTGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  W   +  I+ LR++G +FSVN ML  E+VR RL+ +  +S+ EF+YM+LQA D
Sbjct: 120 IVENNLNWTGRLSAIEFLRDLGKYFSVNVMLDRETVRRRLEGD-GISYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           FVEL + Y C LQ+GGSDQWGNI+ G  L  +     + A+T+PL+T + G K GK+   
Sbjct: 179 FVELHQRYGCALQIGGSDQWGNIVAGARLVRQKLGATVHAMTTPLVTDSEGKKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKK 300
           G +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   EI  +            A+K
Sbjct: 239 GNLWLDPEMTSPYAWYQYFVNTADADVIGYLRWFTFLSADEIAELEDATQNRAHERAAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----------SISKDEVSRG 349
            +A E+TT+VHG         A+   F  +  +    +             +++ +    
Sbjct: 299 RLARELTTLVHGEGATTAVELASQALFGRAELADLDESTLGAALREASNGQVAELKPGGP 358

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V+ G A S   ARR++    + +NN  I +++   +  DF     + L  GK+
Sbjct: 359 DSIVDLLVETGLAASKGAARRNVAEGGVYVNNIRIESDEWIPQHSDFLHERWLVLRRGKR 418

Query: 410 NHIICHLCG 418
           +       G
Sbjct: 419 HIAGVERVG 427


>gi|167013192|pdb|2JAN|A Chain A, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013193|pdb|2JAN|B Chain B, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013194|pdb|2JAN|C Chain C, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013195|pdb|2JAN|D Chain D, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
          Length = 432

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 147/429 (34%), Positives = 229/429 (53%), Gaps = 16/429 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L
Sbjct: 1   MSGM---ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L GG T +IGDP      R +  +  + E  E+I+G    F+ +    
Sbjct: 58  RRFQRAGHRPIVLAGGATGMIGDPRDVG-ERSLNEADTVAEWTERIRGQLERFVDFDDSP 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL  E  +S+ EF+Y++LQ
Sbjct: 117 MGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQ 175

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+VEL + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK+
Sbjct: 176 ANDYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKS 235

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
              G++WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  + +   Q  +   
Sbjct: 236 TGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRA 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRG 349
           A++ +A+E+T +VHG         A+   F             +  +   ++++ +    
Sbjct: 296 AQRRLASELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSP 355

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            G++ L+V +G + S   ARR +    + +NN  + NE+   +  DF     + L  GK+
Sbjct: 356 DGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKR 415

Query: 410 NHIICHLCG 418
           +       G
Sbjct: 416 SIAGVERIG 424


>gi|15608827|ref|NP_216205.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15841146|ref|NP_336183.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31792875|ref|NP_855368.1| tyrosyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121637596|ref|YP_977819.1| tyrosyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661486|ref|YP_001283009.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148822896|ref|YP_001287650.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167969193|ref|ZP_02551470.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404008|ref|ZP_03416189.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215411336|ref|ZP_03420144.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427012|ref|ZP_03424931.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215430581|ref|ZP_03428500.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215445876|ref|ZP_03432628.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218753397|ref|ZP_03532193.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219557611|ref|ZP_03536687.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990071|ref|YP_002644758.1| tyrosyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799272|ref|YP_003032273.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 1435]
 gi|254364529|ref|ZP_04980575.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550698|ref|ZP_05141145.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186642|ref|ZP_05764116.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260200753|ref|ZP_05768244.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260204958|ref|ZP_05772449.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289443146|ref|ZP_06432890.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289447303|ref|ZP_06437047.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CPHL_A]
 gi|289554538|ref|ZP_06443748.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 605]
 gi|289569737|ref|ZP_06449964.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T17]
 gi|289574357|ref|ZP_06454584.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis K85]
 gi|289745874|ref|ZP_06505252.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 02_1987]
 gi|289750245|ref|ZP_06509623.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T92]
 gi|289753779|ref|ZP_06513157.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289757799|ref|ZP_06517177.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289761844|ref|ZP_06521222.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis GM 1503]
 gi|297634241|ref|ZP_06952021.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297731228|ref|ZP_06960346.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525188|ref|ZP_07012597.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 94_M4241A]
 gi|306775874|ref|ZP_07414211.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu001]
 gi|306779692|ref|ZP_07418029.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu002]
 gi|306784425|ref|ZP_07422747.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu003]
 gi|306788792|ref|ZP_07427114.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu004]
 gi|306793127|ref|ZP_07431429.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu005]
 gi|306797507|ref|ZP_07435809.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu006]
 gi|306803388|ref|ZP_07440056.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu008]
 gi|306807970|ref|ZP_07444638.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu007]
 gi|306967787|ref|ZP_07480448.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu009]
 gi|306971983|ref|ZP_07484644.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu010]
 gi|307079695|ref|ZP_07488865.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu011]
 gi|307084272|ref|ZP_07493385.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu012]
 gi|313658560|ref|ZP_07815440.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039702|sp|P67612|SYY_MYCBO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|54042059|sp|P67611|SYY_MYCTU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2326732|emb|CAB10946.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium
           tuberculosis H37Rv]
 gi|13881365|gb|AAK45997.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31618465|emb|CAD96383.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium bovis
           AF2122/97]
 gi|121493243|emb|CAL71714.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|134150043|gb|EBA42088.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505638|gb|ABQ73447.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148721423|gb|ABR06048.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis F11]
 gi|224773184|dbj|BAH25990.1| tyrosyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320775|gb|ACT25378.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 1435]
 gi|289416065|gb|EFD13305.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289420261|gb|EFD17462.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CPHL_A]
 gi|289439170|gb|EFD21663.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 605]
 gi|289538788|gb|EFD43366.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis K85]
 gi|289543491|gb|EFD47139.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T17]
 gi|289686402|gb|EFD53890.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 02_1987]
 gi|289690832|gb|EFD58261.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T92]
 gi|289694366|gb|EFD61795.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289709350|gb|EFD73366.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis GM 1503]
 gi|289713363|gb|EFD77375.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|298494982|gb|EFI30276.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 94_M4241A]
 gi|308215626|gb|EFO75025.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu001]
 gi|308327344|gb|EFP16195.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu002]
 gi|308330786|gb|EFP19637.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu003]
 gi|308334609|gb|EFP23460.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu004]
 gi|308338396|gb|EFP27247.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu005]
 gi|308342119|gb|EFP30970.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu006]
 gi|308345590|gb|EFP34441.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu007]
 gi|308349907|gb|EFP38758.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu008]
 gi|308354528|gb|EFP43379.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu009]
 gi|308358504|gb|EFP47355.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu010]
 gi|308362443|gb|EFP51294.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu011]
 gi|308366128|gb|EFP54979.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu012]
 gi|323719779|gb|EGB28893.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CDC1551A]
 gi|326903303|gb|EGE50236.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis W-148]
 gi|328459024|gb|AEB04447.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 4207]
          Length = 424

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 147/429 (34%), Positives = 229/429 (53%), Gaps = 16/429 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L
Sbjct: 1   MSGM---ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L GG T +IGDP      R +  +  + E  E+I+G    F+ +    
Sbjct: 58  RRFQRAGHRPIVLAGGATGMIGDPRDVG-ERSLNEADTVAEWTERIRGQLERFVDFDDSP 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL  E  +S+ EF+Y++LQ
Sbjct: 117 MGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQ 175

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+VEL + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK+
Sbjct: 176 ANDYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKS 235

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
              G++WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  + +   Q  +   
Sbjct: 236 TGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRA 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRG 349
           A++ +A+E+T +VHG         A+   F             +  +   ++++ +    
Sbjct: 296 AQRRLASELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSP 355

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            G++ L+V +G + S   ARR +    + +NN  + NE+   +  DF     + L  GK+
Sbjct: 356 DGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKR 415

Query: 410 NHIICHLCG 418
           +       G
Sbjct: 416 SIAGVERIG 424


>gi|315655592|ref|ZP_07908490.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315489656|gb|EFU79283.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 425

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 143/414 (34%), Positives = 231/414 (55%), Gaps = 11/414 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDELTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP      R++   + +    ++++     F+ +  G+  A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRM-TAERQLQDKETVAGWADRLQRQIERFLDFE-GENPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKIEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+   +   +      A++ +A
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSREEIEALEIETKENPGKRAAQRALA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGM-GLLTLI 356
             +TT+VHG ++ E+   A+   F      +         T+ + + +V  G   +L L+
Sbjct: 305 EAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRSQVVLGQTNILHLL 364

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           V +G       A+R + S    +NN  + +E   I  +D    G +    GK+ 
Sbjct: 365 VDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDMLPGGVVLFRKGKRQ 418


>gi|281356701|ref|ZP_06243192.1| tyrosyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316828|gb|EFB00851.1| tyrosyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 427

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 161/431 (37%), Positives = 232/431 (53%), Gaps = 27/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RGF +Q ++   ++ L +   V  Y+G+D T +SLH GHL  +M +  +QK 
Sbjct: 2   NIYQELKARGFCYQQTDEEAIEKLLTTEQVKFYVGFDPTGNSLHVGHLLPVMAMRLMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GG T+ IGDPS R  +R MM  + I+EN+  ++     FI    G   A  +
Sbjct: 62  GHIPIVLVGGATAQIGDPSGRISARPMMTLETIEENVRCLRNQLKRFI--DDGDGKAHFV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WLC I YI++LRE+GS FSVNRML+ ESV+SRL  E  LSFLEFNY ILQ YDF  
Sbjct: 120 NNADWLCKIGYIEMLREVGSIFSVNRMLAQESVKSRL--ENGLSFLEFNYSILQGYDFYI 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           L +++ C+L+MGG DQWGN++ G +L  R    ++  +T PLL  ++G K GKT  G  +
Sbjct: 178 LNRDFGCKLEMGGQDQWGNMVAGTELVRRKSGNEVQCMTIPLLMNSNGQKFGKTSGGTNV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TS ++++Q+WRN DDA V       + LP+ EI R        IN AK+I+A E
Sbjct: 238 WLDVNRTSVFDYYQFWRNSDDAQVEKLMLYFSPLPIDEIKR-ICDPAGNINRAKEILAYE 296

Query: 306 ITTMVHGREEAEKAATAAMECF------------------DMSIHSQHMPTISISKDEVS 347
            T + HG   A +A   A   F                  D +     +PT  I      
Sbjct: 297 ATCLAHGEAAAREAFVTAGTRFGFADPEKKVATTSSILTVDTANVQAELPTAEIDGAVFD 356

Query: 348 R--GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              G+ +  L+V AG   S ++ RR ++  A+ I++  +++    +    F +   + L 
Sbjct: 357 DPAGVTVAKLLVLAGLCKSNSDGRRLIQGGAVSIDDEKVADPVAAVTRDSFKAGS-LTLR 415

Query: 406 FGKKNHIICHL 416
            GKKN     L
Sbjct: 416 AGKKNFRRVIL 426


>gi|323258560|gb|EGA42227.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
          Length = 388

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 146/385 (37%), Positives = 215/385 (55%), Gaps = 9/385 (2%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D TA SLH GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + 
Sbjct: 1   YCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEET 60

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +QE + KI+   + F+ +  G+  A+  NN  W  S+  +  LR+IG  FSVN+M++ E+
Sbjct: 61  VQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEA 120

Query: 159 VRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           V+ R  + +Q +SF EF+Y +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL 
Sbjct: 121 VKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLH 180

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             ++F LT PL+T A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T
Sbjct: 181 QNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT 240

Query: 278 TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI---- 331
            + + EI+          +   A+ ++A ++T +VHG E    A       F  S+    
Sbjct: 241 FMDIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSALS 300

Query: 332 --HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + +    +   E+ +G  L+  +V A    S  +AR+ + SNA+ IN    S+ + 
Sbjct: 301 EADFEQLAQDGVPMVEMEKGADLMQALVDAELQPSRGQARKTIASNAVTINGEKQSDPEY 360

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIIC 414
               +D        L  GKKN+ + 
Sbjct: 361 IFNDEDRLFGRYTLLRRGKKNYCLI 385


>gi|227541548|ref|ZP_03971597.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182704|gb|EEI63676.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 419

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 150/416 (36%), Positives = 228/416 (54%), Gaps = 16/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L   C +  +T Y G+D T SSLHAGHL  L++L   Q+ 
Sbjct: 2   NIIEELSWRGLINQSTDLDALKEAC-EQPITLYCGFDPTGSSLHAGHLVPLIMLRRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  ++L GG T +IGDP      R M+  + ++EN+  I+G  S F++         +L
Sbjct: 61  GHHVLALGGGATGMIGDPRDVG-ERSMLSDETVRENLASIQGQISKFVELD--GEKGELL 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA D+V 
Sbjct: 118 NNADWISKMNVIEFLRDIGKSFSLNVMLDRDTVKRRLEND-GMSYTEFSYMLLQANDYVH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           LA+ Y+C LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 177 LARAYNCSLQIGGGDQWGNIVSGVDLNRRMDGRKVHGLTVPLVTDAEGKKFGKSTGGGKL 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E+TSPY+++QY+ N  D+ V+++ K  T L   EI    +         EA+K +A
Sbjct: 237 WLDPELTSPYSWYQYFINAGDSVVINYLKWFTFLTQEEIAEYEQKVADQPFKREAQKRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG E  +    A    F        D    +  +   ++++        ++ L
Sbjct: 297 QELTTLVHGEEATKAVELATQALFGKAELDSLDEKTLAGALAETTVAEVSAGDEPTIVDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +V AG A S   ARR +K      NN  I + + + K  D      + L  GKKN 
Sbjct: 357 LVAAGLAESKGAARRAIKEGGAYANNKRIEDAEWKPKESDLLHGSWLVLRKGKKNF 412


>gi|281421500|ref|ZP_06252499.1| tyrosine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404572|gb|EFB35252.1| tyrosine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 433

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 142/436 (32%), Positives = 217/436 (49%), Gaps = 27/436 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + QI    E     +  +V+AY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MAKNFVEELKWRGMLAQIMPGTE--EYLNTHMVSAYLGTDPTADSLHIGHLCGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q+ GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   S F+ +       
Sbjct: 59  QRCGHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQVSKFLDFDGNEPNK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A ++NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AELVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+   + Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K G
Sbjct: 179 GYDFLYQYEKYGVRLQLGGNDQWGNMTTGTELIHRTLGNDAECFCLTCPLITKADGKKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           KT SG IWL++  T+PY F+Q+W N+ D D   + K  T L    ID       Q     
Sbjct: 239 KTESGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTDLDKETIDALVEEHKQDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISIS 342
             +K +A E+T MVH +E+ + A  A+   F                +    ++P   + 
Sbjct: 299 VLQKRLAEEVTIMVHSQEDLDMAIAASNILFGKATKENLAQLDEATLNDVFANVPHYDLD 358

Query: 343 KDEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           K+ +  G   + L  + G     S +E R+ +K   + +N   ++     +   D     
Sbjct: 359 KNLL--GGTAVDLFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQVVTADDLIDGK 416

Query: 401 NIKLSFGKKNHIICHL 416
            + +  GKKN+ +  +
Sbjct: 417 YLLVQKGKKNYFLITV 432


>gi|94676968|ref|YP_588559.1| tyrosyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220118|gb|ABF14277.1| tyrosyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 424

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 146/418 (34%), Positives = 218/418 (52%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ER  I  I++ + L    ++G ++ Y G+D T  SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERDLIANITDEKGLAKRLNEGTISIYCGFDPTNDSLHVGHLLPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG TS+IGDPSF+   R++  +       EKIK   S F+ +      A++
Sbjct: 64  AGHRPIILIGGATSLIGDPSFKLTERKLNPTYTTNLWSEKIKKNLSLFLDFNKSNNSAII 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
           +NN  W  S+  +  LRE+G  FS+N+M++ E+++ R  + E  +SF EF+Y +LQ YDF
Sbjct: 124 VNNYDWFRSMNILTFLREVGKNFSINQMINKEAIKLRLNRNESGISFAEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L++ Y   LQ+GGSDQWGNI+ GIDL  ++    ++ LT PLLT + GTK GKT    
Sbjct: 184 TYLSQKYGVILQIGGSDQWGNILSGIDLTRKIYQQTIYGLTIPLLTKSDGTKFGKTEDNV 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKII 302
           IWL+ + TSPY  +Q+W N  D DV  F K  T + ++EI  + K      N   A+ I+
Sbjct: 244 IWLDPKKTSPYQLYQFWLNTTDYDVYRFLKFFTFMSLAEITAIEKQNNMSENRQRAQYIL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           A  +T M+HG +    A       F              +    I    +++ + L   +
Sbjct: 304 AEYMTRMIHGNQGLAAAQRITTSLFTGLFKHLTENDFIQLAQDGIPMVNLTQNVDLPQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A  A S  +AR+ + SNAI IN    ++        D        L  GKK + + 
Sbjct: 364 VAASLAPSYGQARKMIISNAIAINGKKQASINYVFSQADRLHQRYTILQRGKKKYCLL 421


>gi|327312729|ref|YP_004328166.1| tyrosine--tRNA ligase [Prevotella denticola F0289]
 gi|326944614|gb|AEA20499.1| tyrosine--tRNA ligase [Prevotella denticola F0289]
          Length = 432

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 140/435 (32%), Positives = 225/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELRWRGMLAQIMPGTE--ELLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  +    A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GK
Sbjct: 179 YDFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++     
Sbjct: 239 TESGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDVIDALIEEHRQDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            ++ +A E+T MVH +++ + A  A+   F  S                 + +P   +SK
Sbjct: 299 LQRRLAEEVTRMVHSQDDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + +  + G     S +E R+ +KS  + +N   ++     +   D      
Sbjct: 359 DIL--GQPAVEVFNQEGMQIFPSKSEMRKLVKSGGVSLNKEKLAAFDQPVTADDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQKGKKNYSLIIV 431


>gi|261337854|ref|ZP_05965738.1| tyrosine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277323|gb|EFA23177.1| tyrosine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 440

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 219/421 (52%), Gaps = 20/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+L+  LQ+ 
Sbjct: 14  SVLDELEWRGLVNQSTDRDRLAAALNGEPITYYCGFDPTAASLHIGNLVQLILMRHLQEA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     + +  E++K      +    G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNAKSIVAQWAERLKRQIGGILVVD-GPNATRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  ++  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ  D++ 
Sbjct: 132 SNYDWTANMNVIDFLRDVGKNFRLGTMLAKDTVARRLDSEDGISFTEFSYQVLQGNDYLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   YDC L+ GGSDQWGN+  G+DL  +++   +  +T+P++T A G K GK+   AIW
Sbjct: 192 LYDEYDCTLETGGSDQWGNLTSGLDLIHKVRGVDVNVMTTPIITDAQGKKFGKSEGNAIW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+ +M S Y F+Q+W N  DA++ S  K  T LP  EI+R            EA++++A 
Sbjct: 252 LDADMLSVYKFYQFWFNRPDAEMESLLKAFTFLPKDEIERLVNESETNPGAREAQRVLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE----------------VSR 348
           E+T++VHG E  + A  A+   F        +   ++                    V+ 
Sbjct: 312 EVTSLVHGDEATKHAIEASTALFGRGGDVTSIDEQTLEAALEGVKIDMEDGTKAFAPVAE 371

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  ++   VKAG   S +EAR+ ++S  + +NN  + +E+  +  +DF       +  GK
Sbjct: 372 GDRIIEAAVKAGLVKSMSEARKTIRSGGLYLNNVRVEDEEATLNGEDFLHGRFALIRRGK 431

Query: 409 K 409
           K
Sbjct: 432 K 432


>gi|260584362|ref|ZP_05852109.1| tyrosine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157880|gb|EEW92949.1| tyrosine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 421

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 134/421 (31%), Positives = 219/421 (52%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q+++   L  L  +  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDDLMWRGAINQMTDEEGLRQLTQEKAVSLYCGVDPTGDSMHIGHLIPFMILRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALM 125
           GH+P+ ++GG T  IGDPS R   R +   +++Q N+EK+       F+     +    +
Sbjct: 62  GHRPVIVIGGATGSIGDPSGRTSERVLQTKEQVQHNVEKLTAQMKRLFLTSQEDQEAVRL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF+
Sbjct: 122 VNNYDWTKELSLLDFLRDYGKHFNLNTMLAKDVVASRL--EVGISFTEFSYQILQSIDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
           +L +  D ++Q+GG+DQWGNI  G++L  +++  +   + LT PL+  + GTK GK+  G
Sbjct: 180 QLFRKEDVQVQIGGADQWGNITAGLELIRKVEGAEARAYGLTIPLMLKSDGTKFGKSAGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N DD DV+ + K  T L   EI+   ++  +     +A+K 
Sbjct: 240 AVWLDSEKTTPYEFYQFWLNQDDRDVIKYIKYFTFLEKEEIEALEVSVQEEPHKRQAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTL 355
           +A E+T  VHG    + A       F   +   +   I      +   E  +    L T 
Sbjct: 300 LAEEVTRFVHGEAALQDALKITNALFTGDVQQLNADEIEQGFKNMPTFESEKVEQNLATW 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G   S  ++R  +++ AI IN   I++ +     +       + +  GKK + +  
Sbjct: 360 LVDLGIEPSRRQSREDIQNGAISINGEKITDLEHVWAPEQSFEGRFVLVRRGKKKYFLVK 419

Query: 416 L 416
           L
Sbjct: 420 L 420


>gi|291517156|emb|CBK70772.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
          Length = 440

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 137/422 (32%), Positives = 212/422 (50%), Gaps = 20/422 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ 
Sbjct: 13  NTLLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQL 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP  +   R +     +    +++K      +    G      
Sbjct: 73  AGHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWADRLKNQIGGILDTE-GANAVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+   A+
Sbjct: 191 HLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKSEGNAV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R            EA+K +A
Sbjct: 251 WLDATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKREAQKTLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE----------------VS 347
            E+T+ VHG    + A  A+   F    + + +    +                      
Sbjct: 311 WEVTSFVHGEAATQSAIDASGALFGRGGNLEDIDEEMLESVLDGFKVVDENGEHVFPVSK 370

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  ++     AG   S +EARR +KS  + +NN+ I +E+  +   DF +     +  G
Sbjct: 371 PGDRVIDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEADFLAGRFALIRRG 430

Query: 408 KK 409
           KK
Sbjct: 431 KK 432


>gi|241895972|ref|ZP_04783268.1| tyrosine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
 gi|241871015|gb|EER74766.1| tyrosine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
          Length = 419

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 159/422 (37%), Positives = 221/422 (52%), Gaps = 25/422 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L+ RG I+Q+++   L  L SQ  +  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 4   DILNELAWRGAINQVTDEDGLRHLISQESIGLYVGIDPTGDSMHIGHLIPFMILKRFQLV 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ ++GGGT  IGDPS +   R+++  +++  N+EKI+           G+ +  ++
Sbjct: 64  GHKPVIVVGGGTGSIGDPSGKKSERKLLSQEDVAANVEKIRAQMVKLF----GENEFTIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  + +LR+ G  FSVN ML+ + V SRL  E  +SF EF Y ILQA DF E
Sbjct: 120 NNYDWLGKMSLLGMLRDYGKLFSVNTMLAKDVVASRL--EAGISFTEFTYQILQAIDFYE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K    RLQ+GGSDQWGNI  G+DL  +        F LT PLL  A GTK GKT  GA
Sbjct: 178 LYKREHVRLQIGGSDQWGNITNGVDLIHKLVDSEAPAFGLTVPLLLKADGTKFGKTEGGA 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N  DADV    K  T L   EI+       +      A++ +
Sbjct: 238 VWLDPEKTTPFEFYQFWLNTADADVEKMLKYFTFLSQEEINDLVAELSENAAARHAQRRL 297

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMG 351
           A E+TT VHG E    A       F  +  +            ++PT  I  D+    +G
Sbjct: 298 AQEVTTFVHGEEAMHTAEVMTNVLFGNADVASLSTDEVAVLAGNVPTFEIENDK----IG 353

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL L+V AG   S   ARR +K  A++IN   I +E   I   D      + +  GKK  
Sbjct: 354 LLDLVVAAGLEKSKTAARRSVKDGAVRINGVQIKDEDAIIDPTDKYDGKYVIVKRGKKKW 413

Query: 412 II 413
            +
Sbjct: 414 AV 415


>gi|119025932|ref|YP_909777.1| tyrosyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|189083644|sp|A1A1W2|SYY_BIFAA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|118765516|dbj|BAF39695.1| tyrosyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 435

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SVLDELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    +++K      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWADRLKKQIGGILETE-GSNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWTASMNVIDFLRDVGKNFRMGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+W
Sbjct: 192 LFDEYHCVLEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D+++ +  K  T LP +EI+R            EA++ +A 
Sbjct: 252 LDGTMLSPYKFYQFWFNRPDSEMENLLKAFTFLPKAEIERLIEESKTNPGAREAQRTLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-----------DEVSRGMGLL 353
           E+T+ VHG E   +A  AA   F        +   ++              +V+ G  + 
Sbjct: 312 EVTSFVHGEEATRQAIEAAGALFGRGGDLADIDESTLEAAIDGMKVDGEFAKVAAGDRVA 371

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              +KAG   S +EAR+ +KS  + +NN+ + +E+  ++  DF     + +  GKK   +
Sbjct: 372 EAGMKAGLFKSISEARKTIKSGGVYLNNTRVEDEEQTLQEGDFLHGRFVLIRRGKKALGV 431

Query: 414 CH 415
             
Sbjct: 432 VE 433


>gi|227488150|ref|ZP_03918466.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227092012|gb|EEI27324.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 419

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 150/416 (36%), Positives = 228/416 (54%), Gaps = 16/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L   C +  +T Y G+D T SSLHAGHL  L++L   Q+ 
Sbjct: 2   NIIEELSWRGLINQSTDLDALKEAC-EQPITLYCGFDPTGSSLHAGHLVPLIMLRRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  ++L GG T +IGDP      R M+  + ++EN+  I+G  S F++         +L
Sbjct: 61  GHHVLALGGGATGMIGDPRDVG-ERSMLSDETVRENLASIQGQISKFVELD--GEKGELL 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA D+V 
Sbjct: 118 NNADWISKMNVIEFLRDIGKSFSLNVMLDRDTVKRRLEND-GMSYTEFSYMLLQANDYVH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           LA+ Y+C LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 177 LARAYNCSLQIGGGDQWGNIVSGVDLNRRMDGRKVHGLTVPLVTDAEGKKFGKSTGGGKL 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E+TSPY+++QY+ N  D+ V+++ K  T L   EI    +         EA+K +A
Sbjct: 237 WLDPELTSPYSWYQYFINAGDSVVINYLKWFTFLTQEEIAEYEQKVADQPFKREAQKRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG E  +    A    F        D    +  +   ++++        ++ L
Sbjct: 297 QELTTLVHGEEATKAVELATQALFGKAELDSLDEKTLAGALAETTVAEVSAGDEPTIVDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +V AG A S   ARR +K      NN  I + + + K  D      + L  GKKN 
Sbjct: 357 LVAAGLAESKGAARRAIKEGGAYANNKRIEDAEWKPKESDLLHGSWLVLRKGKKNF 412


>gi|23465618|ref|NP_696221.1| tyrosyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|81753963|sp|Q8G5G1|SYY_BIFLO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23326289|gb|AAN24857.1| tyrosyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 440

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 137/422 (32%), Positives = 212/422 (50%), Gaps = 20/422 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ 
Sbjct: 13  NTLLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQL 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP  +   R +     +    +++K      +    G      
Sbjct: 73  AGHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWADRLKNQIGGILDTE-GANAVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+   A+
Sbjct: 191 HLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKSEGNAV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R            EA+K +A
Sbjct: 251 WLDATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKREAQKTLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE----------------VS 347
            E+T+ VHG    + A  A+   F    + + +    +                      
Sbjct: 311 WEVTSFVHGEAATQAAIDASGALFGRGGNLEDIDEEMLESVLDGFKVVDENGEHVFPVSK 370

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  ++     AG   S +EARR +KS  + +NN+ I +E+  +   DF +     +  G
Sbjct: 371 PGDRVIDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEADFLAGRFALIRRG 430

Query: 408 KK 409
           KK
Sbjct: 431 KK 432


>gi|84496716|ref|ZP_00995570.1| tyrosyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383484|gb|EAP99365.1| tyrosyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 419

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 138/413 (33%), Positives = 218/413 (52%), Gaps = 10/413 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L+ L  RG + Q ++   L    + G +TAY G+D TA SLH G+L QL+++  LQ
Sbjct: 1   MNDILAELQWRGLVSQTTDEGALRDALTSGPITAYCGFDPTAPSLHFGNLVQLIVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHK I L+GG T +IGDP      R +   ++  E +  I+     F+ +  G   A+
Sbjct: 61  RAGHKVICLVGGSTGLIGDPRP-SAERVLKTKEQTAEWVAGIQQQVQPFLDFE-GDNAAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+IG  F VN+M+  ++V +RL  ++ +S+ EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTAPLSALDFLRDIGKHFRVNQMVKKDAVAARLNSDEGISYTEFSYQILQGLDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQ GG DQWGN+  G DL  +++   +  LT+PL+T ++G K GK+   A
Sbjct: 179 LELYRAHGCTLQTGGQDQWGNLTAGSDLIHKVEGDSVHLLTTPLVTDSAGNKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ EMTSPY F+QYW N++DA V+   +  T     EI  + +   +      A++ +
Sbjct: 239 VWLSSEMTSPYAFYQYWLNVEDASVIKLVRIFTDRNQDEIAELERQVSEEPFRRAAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A ++TT+VHG         A+   F           +    T  +   EVS GM +   +
Sbjct: 299 AADVTTLVHGAGATASVQAASEALFGKGDLAALDLRTLQDATAELPGGEVSSGMTMTDAL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V  G   S N ARR +      +N   +++ +  +  + F       L  G+K
Sbjct: 359 VAVGLVDSRNAARRAIGDGGASVNGEKVTDPEFTLADEHFLHGTVAILRRGRK 411


>gi|325860199|ref|ZP_08173324.1| tyrosine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482286|gb|EGC85294.1| tyrosine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 432

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 139/435 (31%), Positives = 224/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELRWRGMLAQIMPGTE--ELLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  +    A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GK
Sbjct: 179 YDFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++     
Sbjct: 239 TESGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDIIDALIEEHRQDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            ++ +A E+T MVH +++ + A  A+   F  S                 + +P   +SK
Sbjct: 299 LQRRLAEEVTRMVHSQDDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + +  + G     S +E R+ +K   + +N   ++     +   D      
Sbjct: 359 DIL--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTADDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQKGKKNYSLIIV 431


>gi|163787240|ref|ZP_02181687.1| tyrosyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877128|gb|EDP71185.1| tyrosyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 432

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 146/435 (33%), Positives = 230/435 (52%), Gaps = 24/435 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
               F+  L+ RG +H       ++    + + +AY+G+D TA SLH G+L  +MLL   
Sbjct: 1   MGKSFVEELTWRGMLHDSMP--GVEKHMDETMRSAYVGFDPTADSLHIGNLVPIMLLAHY 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q+ GHKP++L+GG T +IGDPS +   R ++    ++ N E IK   S F+ +       
Sbjct: 59  QRCGHKPVALVGGATGMIGDPSGKSSERNLLDEATLRHNQEAIKNQLSHFLNFDGKTPNS 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMIL 179
           A+++NN  W+    +++ +R++G   +VN M++ +SVR+R+        +SF EF Y ++
Sbjct: 119 AVLVNNYDWMKEFSFLEFIRDVGKHITVNYMMAKDSVRNRISGESSNDGMSFTEFTYQLV 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q YDF+ L +  DC +QMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK
Sbjct: 179 QGYDFLHLYRANDCTIQMGGSDQWGNITTGTELIRRIGGGKGYAITCPLITKSDGSKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           +  G +WL+ + TSPY F+QYW N  D D   + K  T L   EI+ +      +     
Sbjct: 239 SEGGNVWLDAKRTSPYKFYQYWLNSSDEDAEKYIKIFTFLTKEEIENIINEHSNDPGARI 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISK 343
            +K +A EIT MVH +E+ E A  A+   F                    + +    I+K
Sbjct: 299 LQKRLAEEITIMVHSKEDYENAVKASKILFSKDFKNEIKELDENLFLDVFEGVKQAEITK 358

Query: 344 DEVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            E + G+ ++  +  K  F +S  EARR LK NAI +N   +  E  ++   D  +   I
Sbjct: 359 AEFNDGIDMIGALAAKTNFLSSNGEARRALKENAIAVNKEKVK-EDYKLTSDDLINNKYI 417

Query: 403 KLSFGKKNHIICHLC 417
            +S GKK + I  + 
Sbjct: 418 VISRGKKTNFILKMI 432


>gi|300787884|ref|YP_003768175.1| tyrosyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299797398|gb|ADJ47773.1| tyrosyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 426

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 228/428 (53%), Gaps = 15/428 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLF 61
                L  LS RG I Q ++   L     Q  G VT Y G+D TA SLHAG+L  L++L 
Sbjct: 1   MSEHILDELSWRGLIAQSTDIDALRRELDQDQGPVTLYCGFDPTAPSLHAGNLVPLLMLK 60

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q+ GH+PI L GG T +IGDP      R +     + E   +I+G    F+ +    T
Sbjct: 61  RFQRAGHRPIVLAGGATGMIGDPRD-TGERTLNTLDVVAEWAGRIRGQLERFVDFDDSAT 119

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A++ NN  W      ++ LR++G  FS+N ML+ E+V+ RL+ +  +S+ EF+Y++LQ+
Sbjct: 120 GAIVENNLNWTGQQTALEFLRDVGKHFSINVMLNRETVKRRLEGD-GMSYTEFSYLLLQS 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+++L + Y CRLQ+GGSDQWGN++ G+DL  R     + ALT+PL+T A G K GK+ 
Sbjct: 179 QDYLQLHRQYGCRLQVGGSDQWGNLVGGVDLIRRTDGAAVHALTAPLVTDAEGRKFGKST 238

Query: 242 -SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEA 298
             G +WL+ EMTSPY ++QY+ N+ DADVV + +  T L   EI  +A+   Q   +  A
Sbjct: 239 GGGNLWLDPEMTSPYAWYQYFVNVGDADVVRYLRMFTFLDQEEIAALAEDTEQRPHLRAA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG--M 350
           +K +A E TT+VHG E+  +   A+   F                   +   +V  G   
Sbjct: 299 QKRLAEEFTTLVHGEEQTRQVINASQALFGRGELGDLDERTLDAAMAEVPNGKVDPGAEP 358

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L++  G   S   ARR LK     +NN  I++E+ +   +D      + +  GK+N
Sbjct: 359 TIVDLLLAGGLVDSKGAARRTLKEGGAYVNNVKIADEEWKPSREDALHGKWLVVRKGKRN 418

Query: 411 HIICHLCG 418
                L G
Sbjct: 419 VAGVALGG 426


>gi|255326330|ref|ZP_05367414.1| tyrosine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296547|gb|EET75880.1| tyrosine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 434

 Score =  352 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 144/424 (33%), Positives = 223/424 (52%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++   L+   S+  +T Y GYD TA+SLH GHL QL+++  LQ  
Sbjct: 17  NIWQELKWRGLVHVSTDEAALEKALSEESLTFYTGYDPTAASLHLGHLVQLLVMRRLQLA 76

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDP  +   R +   + + E ++ ++     F+ +  G+  A M+
Sbjct: 77  GHKPLGLVGGFTGLIGDPR-QTSERVLNSPEVVAEWVKSLRAQIERFLSFE-GENAARMV 134

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  + LLR++G  F V  M+  E V  RL  ++ +S+ EF+Y ILQ  DF+E
Sbjct: 135 NNLDWSGQMSALQLLRDVGKHFRVGTMVKKEIVAKRLNSDEGISYTEFSYQILQGLDFLE 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIW
Sbjct: 195 LNRRFGCTLQTGGSDQWGNLTSGTELIRKVEGKSVHAIGTPLITNSDGTKFGKSEGNAIW 254

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           LN +M SPY F+Q+W N  DADV+   K  T L  +EI        +     EA+K +A 
Sbjct: 255 LNPQMCSPYAFYQFWLNTADADVLDRLKVFTFLTRAEIAEFAEKVEKEPFKREAQKTLAY 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGLL 353
            +T++VHG E  ++A  A+   F                   +P+  +S+D +     ++
Sbjct: 315 LVTSLVHGTEATDQAVAASEALFGKGDFAALDEATLESVVAELPSAKLSEDRLD----MI 370

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +++ + GFA S +EARR LK     +N   +  E   I   D        +  GKKN   
Sbjct: 371 SVLTELGFAKSNSEARRILKEGGASVNGVKVQGEDAAISKDDLLHGRFAMVRRGKKNQGA 430

Query: 414 CHLC 417
             L 
Sbjct: 431 VELI 434


>gi|225572274|ref|ZP_03781138.1| hypothetical protein RUMHYD_00568 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040258|gb|EEG50504.1| hypothetical protein RUMHYD_00568 [Blautia hydrogenotrophica DSM
           10507]
          Length = 422

 Score =  352 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 174/409 (42%), Positives = 262/409 (64%), Gaps = 7/409 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 16  IYEELQARGLIAQVTDEKEIRELVNAGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 75

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT ++GDPS R + R MM    I  NIE  K   S FI++G G   A+M+N
Sbjct: 76  NRPIALLGGGTGMVGDPSGRTDMRPMMTVDTINHNIECFKKQMSRFIEFGEG--KAIMVN 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G+ FSVNRML+ E  + R+  ++ LSF EFNYMI+Q+YDF  L
Sbjct: 134 NADWLLDLNYVELLREVGAHFSVNRMLAAECYKQRM--KEGLSFFEFNYMIMQSYDFYRL 191

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             ++ C++Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 192 FLDHGCQMQFGGDDQWSNMLAGTELIRRKLGENAYAMTQTLLLNSEGKKMGKTQSGAVWL 251

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + + T+P+ F+QYWRN+DDADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 252 DPDKTTPFEFYQYWRNVDDADVLHCLRLLTFLPLEQIDEMDKWEGSQLNQAKEILAHELT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG +EA+KA   A   F  S  S+H+PT+ +S+++++ G + +++L++KA    + N
Sbjct: 312 ALVHGEDEAQKAEAGAKALFTGSGDSEHIPTVELSEEDLTDGEIDIISLLIKAELVGTRN 371

Query: 367 EARRHLKSN-AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E RR +  N  + I+   I++ K Q+K +  +  G I +  GKK+    
Sbjct: 372 EGRRAITPNTCVTIDGEKIADIKYQVKKEALEGDG-ILVGKGKKSFKKV 419


>gi|332520083|ref|ZP_08396547.1| tyrosyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044642|gb|EGI80836.1| tyrosyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 436

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 150/439 (34%), Positives = 234/439 (53%), Gaps = 28/439 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             + F+  L  RG +H I    E     S+ + TAYIG+D T+ SLH G L  ++LL  L
Sbjct: 1   MANKFVEELRWRGMVHDIMPGTE--EQLSKEMTTAYIGFDPTSDSLHIGSLVPIILLVHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +K GHKP++L+GG T +IGDPS + + R ++  + +  N++ IK + S F+ + + K +A
Sbjct: 59  EKAGHKPVALVGGATGMIGDPSGKSDERNLLDEKALAHNVQGIKNVLSRFLDFNSTKKNA 118

Query: 124 LM-LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ---SLSFLEFNYMIL 179
            + +NN  W+ +  +ID  R++G   +VN M++ +SV+ RL  E+    +SF EF Y ++
Sbjct: 119 PVLVNNYDWMKNFSFIDFARDVGKRLTVNYMMAKDSVKKRLSGEEGSVGMSFTEFTYQLI 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----TPKLFALTSPLLTTASGT 235
           Q YDF  L K  DC+LQMGGSDQWGNI  G +L  R+     T K +A+T PL+T A G+
Sbjct: 179 QGYDFYYLHKEMDCKLQMGGSDQWGNITTGTELVRRMNVGDETAKAYAMTCPLITKADGS 238

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGK 293
           K GK+  G +WL+ + TS Y F+Q+W N  D D   + K  T L    I+       +  
Sbjct: 239 KFGKSEGGNVWLDTDKTSVYKFYQFWLNTTDEDAEKYIKIFTFLDKETIENLVAEHKETP 298

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTI 339
            +   +K +A E+TT VH   +   A  A+   F  + +               + +P  
Sbjct: 299 HLRLLQKQLAKEVTTFVHSEADFLNAEKASGILFSKTFNEDIRTLDEKLFLDVFEGVPQA 358

Query: 340 SISKDEVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            + K ++  G+ ++  +  K  F  S  EARR LK NA+ +N   +  E   I  +D  +
Sbjct: 359 ELPKADLDNGIDMIAALAAKTNFLNSNGEARRALKENAVSVNKEKVK-EDYLITNKDLIN 417

Query: 399 TGNIKLSFGKKNHIICHLC 417
              + L+ GKKN  I  + 
Sbjct: 418 GKYVVLNKGKKNTYIIKVV 436


>gi|153837418|ref|ZP_01990085.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149749218|gb|EDM60003.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 419

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   
Sbjct: 1   MTTPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +       
Sbjct: 60  QDAGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLS-KPM 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
           +M+NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+  +Q +SF EF+Y +LQ+Y
Sbjct: 119 IMVNNADWMKAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  
Sbjct: 179 DFAELNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       +   +A++
Sbjct: 239 GAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----GLLTL 355
           I+A E+T  VHG E    A       F  ++    +  +   + +    +      L+ L
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQDLVEL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++++G A+S   AR H+ +NAI +N   +S +   +    F       L  GKK+  +  
Sbjct: 359 LIESGLASSKRIAREHISNNAISVNGEKMSADNPSLSFPLF--DQYWLLQRGKKHFCLVK 416


>gi|332702737|ref|ZP_08422825.1| Tyrosyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332552886|gb|EGJ49930.1| Tyrosyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 418

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 230/422 (54%), Gaps = 18/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q+S+  ++    S    + Y G+D TASSLH GHL  L+ L+  Q+ 
Sbjct: 2   NIIDELKWRGLIYQVSDEGKVREYLSTPGRSLYCGFDPTASSLHIGHLVPLLALYRFQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+LMGGGT++IGDPS +D  R+++  + I+ +IE IK              +   +
Sbjct: 62  GHRPIALMGGGTALIGDPSGKDVERQLIARETIEASIESIKTQVRRIF-----GGEVRFV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W+     I+LLR++G +F+VN M+  ESV++R+ R++  +SF EF+YMILQAYDF 
Sbjct: 117 NNYDWIGRTTAIELLRDVGKYFTVNWMMQKESVKNRISRDEVGISFTEFSYMILQAYDFS 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            LA+   C LQ+GGSDQWGNI  G +L  +    +  ALT PL+TTA G K GK+  GAI
Sbjct: 177 VLAEQEGCMLQIGGSDQWGNITAGTELIRKKLGKEAIALTFPLITTADGKKFGKSEKGAI 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           +L+  +T  Y F+QY+   DD DV+ F +  T +   EI+ +     +  E    ++ +A
Sbjct: 237 FLDPALTPVYEFYQYFMRTDDRDVIRFLRYFTFVSREEIEALEVTLAERPEQRVPQRRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SISKDEVSRGMGLLT 354
            E+T +VHG EE  K   A    F      +  P +         S+S   +     L  
Sbjct: 297 AEMTRLVHGEEELLKVEAATAALFGTGDLREVDPVMLRIVFNEAPSVSYPGLEGLPDLPQ 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V  G + S  +AR+ L+   + +NN  I +   +    D      + +  GKKN+ + 
Sbjct: 357 ILVDLGLSKSKGQARKDLEQGGVYVNNCRI-DLTWKPSAGDLLHGQALLVRKGKKNYGLV 415

Query: 415 HL 416
            +
Sbjct: 416 QV 417


>gi|298345143|ref|YP_003717830.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304390730|ref|ZP_07372682.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|298235204|gb|ADI66336.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304325613|gb|EFL92859.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 425

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 143/414 (34%), Positives = 230/414 (55%), Gaps = 11/414 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDELTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP      R++   + +    ++++     F+ +  G+  A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRM-TAERQLQDKETVAGWADRLQCQIERFLDFE-GENPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKVEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+       +      A++ +A
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSRGEIEALETETKENPGKRAAQRALA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGM-GLLTLI 356
             +TT+VHG ++ E+   A+   F      +         T+ + + +V  G   +L L+
Sbjct: 305 EAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRTQVVLGQTNILHLL 364

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           V +G       A+R + S    +NN  + +E   I  +D    G +    GK+ 
Sbjct: 365 VDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDVLPGGVVLFRKGKRQ 418


>gi|254821549|ref|ZP_05226550.1| tyrosyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 420

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 148/419 (35%), Positives = 224/419 (53%), Gaps = 13/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 2   ILDELGWRGLIAQSTDLDALAAEARRGPMTVYAGFDPTAPSLHAGHLVPLLALRRFQRAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L GG T +IGDP      R +  +  + E  E+I G    F+ +    T A+++N
Sbjct: 62  HRPIVLAGGATGMIGDPRDVG-ERTLNEADTVAEWTERIGGQLQRFVDFDDSPTGAVVVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  I+ LR+IG  FSVN ML  ++VR RL  +  +S+ EF+YM+LQA D+VEL
Sbjct: 121 NLDWTRPLSAIEFLRDIGKHFSVNVMLDRDTVRRRLDGD-GISYTEFSYMLLQANDYVEL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAIW 246
            + Y CRLQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   G++W
Sbjct: 180 HRRYGCRLQIGGSDQWGNIIAGVRLVRQQLGASVHALTVPLVTAADGTKFGKSTGGGSLW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +  +   A++ +A 
Sbjct: 240 LDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELEQATAERPQQRAAQRRLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGLLTLI 356
           E+T +VHG    E    A+   F             S  +   S+++ +     G++ L+
Sbjct: 300 ELTVLVHGEAATEAVEHASRALFGQGELGRLDEATLSAALRETSVAELKPGGPDGIVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V +G + S   ARR +    + +NN  I +E+   +  DF     + L  GK+      
Sbjct: 360 VASGLSESRKAARRTIGEGGVSVNNVRIESEEWAPQPADFLHGRWLVLRRGKRTVAGVE 418


>gi|296535640|ref|ZP_06897818.1| tyrosine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264035|gb|EFH10482.1| tyrosine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 406

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 200/411 (48%), Positives = 276/411 (67%), Gaps = 7/411 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +FL +  ERG+IHQ+++   +     QG + AY+G+D TA SLH GHL  +MLL  LQ
Sbjct: 1   MDEFLQVARERGYIHQVTDEAAMAARMKQGPLPAYVGFDCTADSLHVGHLLSIMLLRLLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+P++L+GGGT+ IGDPSFRD++R ++  ++I  N   I+  F +F+ +  G+  A+
Sbjct: 61  KTGHRPVALLGGGTTRIGDPSFRDDARPLLSDEQINVNKAGIRRTFDAFLDFAPGR-GAM 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ML+N  WL  + YI  LR+IG  FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQ+YDF
Sbjct: 120 MLDNAEWLDQLLYIPFLRDIGRHFSVNRMLTMDSVKLRLEREQPLSFLEFNYMLLQSYDF 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +   LQMGGSDQWGNII G++L  R    ++F LT+PLLTTASGTKMGKT  GA
Sbjct: 180 LELRRRHGVGLQMGGSDQWGNIIMGVELNRRCDGAEVFGLTTPLLTTASGTKMGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +  +PY +WQ+WRN +DADV  F    T LPM E+ R+  L G E+NEAKKI+AT
Sbjct: 240 VWLNPDRLAPYGYWQFWRNTEDADVGRFLALFTELPMEEVRRLGALGGAEVNEAKKILAT 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T ++HGRE AE AA  A   FD    +  +P+I+ S         ++ L V+AGFA S
Sbjct: 300 EATALLHGREAAELAAETARRAFDEGQAADTLPSIAASL-----PAPVIDLAVQAGFAAS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             EARR ++ N +++N+  I++E L +   D       KLS G+K H++  
Sbjct: 355 KGEARRLIRQNGLRLNDEAITDEALAVTEADLRDGA-AKLSAGRKRHVLIR 404


>gi|224283247|ref|ZP_03646569.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|311064520|ref|YP_003971245.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|313140393|ref|ZP_07802586.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310866839|gb|ADP36208.1| TyrS Tyrosyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|313132903|gb|EFR50520.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 440

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 136/427 (31%), Positives = 214/427 (50%), Gaps = 20/427 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++ ++L    +   VT Y G+D TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SVLEELEWRGLISQSTDRKQLAEALNGEPVTYYCGFDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E++K      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWAERLKRQIGGILET-YGDNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A+G K GK+   A+W
Sbjct: 192 LFDEYGCTLEIGGSDQWGNLTSGMDLIRKVRGATVNVFTSPIITDATGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D ++    K  T LP +EI+R            EA++ +A 
Sbjct: 252 LDATMLSPYRFYQFWFNRPDVEMEGLLKAFTFLPKAEIERLAEESRTNPGAREAQRTLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD------EVSRGMG------- 351
           E+T+ VHG    + A  A+   F        +   ++         E   G         
Sbjct: 312 EVTSFVHGEAATQAAIDASAALFGRGGDLASIDEDTLEAAIDGLKIEDESGAKTFASVGI 371

Query: 352 ---LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              +    VKAG   S +EAR+ +KS  + +NN+ +++E+  +   DF       +  GK
Sbjct: 372 DDRITEAGVKAGLFKSISEARKTIKSGGVYLNNNRVTDEEQTLGQDDFLHGRFALIRRGK 431

Query: 409 KNHIICH 415
           K   +  
Sbjct: 432 KALGVVE 438


>gi|256847600|ref|ZP_05553045.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715289|gb|EEU30265.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 416

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 140/420 (33%), Positives = 221/420 (52%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L +   ++ Y G D T  SLH GHL   ++L   Q  
Sbjct: 2   DILEDLKWRGAINQCTDLNGLRELLNSKKISLYCGTDPTGDSLHVGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R++  + ++Q N E +            G  +  ++
Sbjct: 62  GHHPYILIGGGTGFIGDPSGRKTERQLQTATQVQHNKEALTRQMIKLF----GTENFKIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  I  +D LR+ G  F+VN MLS E+V SRL  +  +SF EF+Y ILQ+ DF+ 
Sbjct: 118 DNYEWLSKISLLDFLRDYGKSFNVNTMLSKEAVASRL--KNGISFTEFSYQILQSVDFLY 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L      +LQ+GG+DQWGN+  G+ L   +    K+F LT PL+  A GTK GK+  GA+
Sbjct: 176 LNNVDHIQLQIGGADQWGNLTNGVYLIHSKKPNEKVFGLTIPLMLKADGTKFGKSAGGAV 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL+   TSP+ F+Q+W N DD DVV + K  T L   EID +A+      +  EA++ +A
Sbjct: 236 WLDANKTSPFEFYQFWFNQDDLDVVKYLKYFTFLTHQEIDDLAEKVKLEPQKREAQRRLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVS-RGMGLLTLIV 357
            E+T  VHG +  ++A   +   F+ +I    +  +      +   E++   + ++  +V
Sbjct: 296 EEVTKFVHGEKTMKQAERISNLLFNGNIQDLSVSELKQAFKKVPSVEINLDSVNVIDWLV 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +    +S  +AR  + + AI IN   +++E   +  ++      +    GK+N+ +  + 
Sbjct: 356 QTEIESSKRQAREDVNNGAIMINGQKVNDENYIVDPKNHFEGKYVVARKGKRNYFLAKVV 415


>gi|325268528|ref|ZP_08135158.1| tyrosine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989056|gb|EGC21009.1| tyrosine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 432

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 139/435 (31%), Positives = 223/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELRWRGMLAQIMPGTE--ELLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  +    A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GK
Sbjct: 179 YDFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++     
Sbjct: 239 TESGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDVIDALIEEHRQDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            ++ +A E+T MVH +++ + A  A+   F  S                 + +P    SK
Sbjct: 299 LQRRLAEEVTRMVHSQDDLDMAVAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEASK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + +  + G     S +E R+ +K   + +N   ++     +   D      
Sbjct: 359 DIL--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTADDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQKGKKNYSLIIV 431


>gi|315604494|ref|ZP_07879558.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313778|gb|EFU61831.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 420

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 140/425 (32%), Positives = 223/425 (52%), Gaps = 19/425 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ
Sbjct: 1   MTDILDDLQWRGLLAQHTDLEALRAHLASGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P++L+GG T  IGDP  +   R++  +  +Q   ++++   S F+ +  G   A 
Sbjct: 61  LAGHRPLALVGGATGQIGDPR-QSGERQLQPTDVVQGWADRLRAQISRFLDFE-GPAAAQ 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  IDLLR IG +F V  ML  + V  R+  ++ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTEQMSAIDLLRTIGKYFRVGTMLGKDIVARRIASDEGISYTEFSYQVLQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   C L+ GG+DQWGN++ G+DL  +++  +   +T+P++T A GTK GK+  GA
Sbjct: 179 LELFRREGCTLETGGNDQWGNMVGGVDLIRKVEGAETHVMTTPIITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ EM +PY F+Q+W  + D DVV F K  T +   EI+   +   +      A+K +
Sbjct: 239 IWLDPEMMTPYAFYQFWLQVADEDVVRFLKIFTFMSREEIEALAVEVAERPHQRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI-----------HSQHMPTISISKDEVSRGMG 351
           A  +T +VHG ++ ++   A    +                +  +P  S+S  E      
Sbjct: 299 AASVTELVHGADQLKRVLAATQALWGGGDIRDLDAATLAAATADLPRASLSLGE----AT 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++  +V  GF      ARR + S    +NN  + +    +   D  + G   +  G+KN 
Sbjct: 355 VVDALVALGFEKGKTAARRTIASGGASVNNVKVEDPDTLLNASDVLAGGLALIRKGRKNL 414

Query: 412 IICHL 416
            +  L
Sbjct: 415 AVLEL 419


>gi|167462682|ref|ZP_02327771.1| tyrosyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 420

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDAEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLF 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R++   +++Q N+E +         +G G  +  M+
Sbjct: 62  GHRPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVEALTAQMKKLFGFG-GDNEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  FSVN ML+ + V SRL  E  +SF EF+Y ILQ+ DF  
Sbjct: 121 NNYDWTHKMNVLDFLRDYGKNFSVNTMLAKDIVASRL--ESGISFTEFSYQILQSMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K  D +LQ+GG+DQWGNI  G+DL  +      K F LT PL+  A GTK GKT  GA
Sbjct: 179 LFKEEDVQLQIGGADQWGNITSGLDLIRKKEGPDAKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L    I+             EA+K++
Sbjct: 239 IWLDPAKTTPFEFYQFWVNTDDRDVVKYLKFFTFLTKEVIEELAQKVETDPGKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   ++       F   I       I     ++           ++  +
Sbjct: 299 AAEMTKFVHGEEALAQSGKITEALFSGDIKGLTADEIEQGFKDMPTFHASKESKNIVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+     S  +AR  + + AI +N   +S+   ++ +++      I +  GKKN+ +  L
Sbjct: 359 VELRIEPSKRQAREDITNGAISMNGERVSDLNTEVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|97201475|sp|Q74LL0|SYY_LACJO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 420

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 215/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  +D LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIRNNAEWLGKMNLLDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   ++Q+GGSDQWGNI  GIDL  +        F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQMQIGGSDQWGNITAGIDLIHKLDGSDRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQIITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N     +    I+         + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQDDIDFIIEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|42518261|ref|NP_964191.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41582545|gb|AAS08157.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 426

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 215/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 9   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 69  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEEKLTAQMKKLF----GTENF 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  +D LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 125 EIRNNAEWLGKMNLLDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   ++Q+GGSDQWGNI  GIDL  +        F LT PL+  A GTK GK+ 
Sbjct: 183 FYHLNKDNGVQMQIGGSDQWGNITAGIDLIHKLDGSDRPAFGLTIPLMLKADGTKFGKSA 242

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 243 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 303 KRLAEEVTKFVHGEEGLKEAQIITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N     +    I+         + +  GK+ + +
Sbjct: 363 EFLVETKIEPSKRQAREDVKNGAIYVNGERQDDIDFIIEPDSDFDGKYVIIRKGKRKYTL 422

Query: 414 CHL 416
             +
Sbjct: 423 VKI 425


>gi|154509115|ref|ZP_02044757.1| hypothetical protein ACTODO_01634 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798749|gb|EDN81169.1| hypothetical protein ACTODO_01634 [Actinomyces odontolyticus ATCC
           17982]
          Length = 420

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 139/422 (32%), Positives = 222/422 (52%), Gaps = 11/422 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ
Sbjct: 1   MTDILDELQWRGLLAQHTDLEALREHLNAGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P++L+GG T  IGDP  +   R++  ++ ++   +++    S F+ +  G   A 
Sbjct: 61  LAGHRPLALVGGATGQIGDPR-QSGERQLQSTEVVKGWADRLHSQISKFLDFE-GPAAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  IDLLR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQEMSAIDLLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   C L+ GG+DQWGN++ G+DL  +++      +T+P++T A GTK GK+  GA
Sbjct: 179 LELYRRNGCTLETGGNDQWGNMVGGVDLIRKVEGVDTHVMTTPIITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ EM +PY F+Q+W  + D DVV F K  T     EI+   +   +      A+K +
Sbjct: 239 IWLDPEMMTPYAFYQFWLQVADDDVVRFLKIFTFKSREEIEALAVEVAERPHQRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMG-LLTL 355
           A  +T +VHG ++ E+   A    +                T  + +  ++ G   +   
Sbjct: 299 AASVTELVHGADQLERVLAATDALWGGGDIRDLDEATLAAATADLPRASLTVGESTVADA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            V  GF      ARR + S    INN  + + +  ++ +D  + G   +  G+KN  +  
Sbjct: 359 FVALGFEKGKTAARRTISSGGASINNVKVEDPEAVLREEDVLAGGLALIRKGRKNLAVLE 418

Query: 416 LC 417
           L 
Sbjct: 419 LS 420


>gi|261408561|ref|YP_003244802.1| tyrosyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261285024|gb|ACX66995.1| tyrosyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 419

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 212/421 (50%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L ++  ++ Y G D T  S+H GHL   ++L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDAEGLRELTNEKSISLYCGVDPTGDSMHIGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R +   +++Q N++ + G          G     M+
Sbjct: 62  GHRPVILIGGATGTIGDPSGRQTERSLQTLEQVQANVDALTGQMKKLF-VTEGDNQIRMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF+Y ILQ+ D++ 
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDVVASRL--DSGISFTEFSYQILQSVDYLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GA
Sbjct: 179 LYQHEDVQLQIGGSDQWGNITSGLDLIRKKEGPEAKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L   +ID             EA+K +
Sbjct: 239 IWLDPNKTTPFEFYQFWANTDDRDVVKYLKYFTFLTKEQIDELAEKVQSEPHKREAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E  E+A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTRFVHGEEMLEQAKRITAALFSGDIKSLTADEIEQGFKEMPTFEATPETKNIVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  +   AI +N   +S+   ++          I +  GKKN+ +  +
Sbjct: 359 VDLGIEPSKRQAREDITKGAISMNGERVSDLDHEVTADQAIGGRFIIIRKGKKNYSLVKM 418

Query: 417 C 417
            
Sbjct: 419 S 419


>gi|326382716|ref|ZP_08204407.1| tyrosyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198835|gb|EGD56018.1| tyrosyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 423

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 144/424 (33%), Positives = 225/424 (53%), Gaps = 14/424 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + L  L  RG I Q ++  +L        ++ Y G+D TASSLHAGHL  L+ L   
Sbjct: 1   MSENILDDLIWRGLIGQTTDENDLREALD-KPISLYAGFDPTASSLHAGHLVPLLTLRRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+P+ L GG T +IGDP      R M  S  + +  E I G    F+        A
Sbjct: 60  QLAGHRPVVLAGGATGLIGDPRDVG-ERTMNSSDTVADWAENIVGQLQRFVTIDDSDNGA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++NN  W   +  I+ LR++G  FSVN ML+ E+V+ RL+ +  +S+ EF+Y++LQ+ D
Sbjct: 119 LLVNNFDWTGPMSTIEFLRDVGKHFSVNVMLARETVKRRLESD-GISYTEFSYLLLQSND 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           +++L + Y C LQ+GGSDQWGNII G+DL  ++      ALT PL+T+A G K GK+   
Sbjct: 178 YLQLYRKYGCVLQIGGSDQWGNIIGGVDLIRKVDGGSAHALTVPLVTSADGKKFGKSTGG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G++WL+ E+TSPY ++QY+ N  DADV+ F K  T L   EI+ + +   +   + EA+K
Sbjct: 238 GSVWLDPELTSPYAWYQYFVNTADADVIKFLKWFTFLRREEIEELEQLTAEKPFLREAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGL 352
            +A E+TT++HG ++   A  A+   F  +  +          +    +++ +      +
Sbjct: 298 RLAQELTTLIHGADQTAAAELASRALFGRAELNDLDEPTLAAALGETGLAEFDAGATPSI 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G A S   ARR +      +NN  +++        D      + L  GKK   
Sbjct: 358 VELLVASGLADSNKAARRAVDEGGAYVNNVKVTDADWMPASNDLLFGKWLVLRRGKKTFA 417

Query: 413 ICHL 416
              +
Sbjct: 418 GAKI 421


>gi|296140090|ref|YP_003647333.1| tyrosyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296028224|gb|ADG78994.1| tyrosyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 422

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 224/420 (53%), Gaps = 14/420 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +D L  LS RG I Q ++   L    + G +T Y G+D TASSLHAGHL QL+ L   
Sbjct: 1   MSADILEELSWRGLIAQSTDLEALRERLAAGPITLYAGFDPTASSLHAGHLVQLLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T  +GDP      R M     + E   KI      F+ +  G+  A
Sbjct: 61  QEAGHRPIVLGGGATGQVGDPRDVG-ERVMNSVDTVAEWAAKIDTQLQRFVSFE-GENAA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   +     LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQAYD
Sbjct: 119 ILVNNLDWHGQMNVPTFLRDVGKHFSINVMLARDTVKRRLESD-GISYTEFSYMLLQAYD 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           +VELA+ YD  LQ GGSDQWGNI+ G+DL  ++    + ALT+ L+T++ G K GK+   
Sbjct: 178 YVELARRYDAALQTGGSDQWGNIVAGVDLNRKIDGRHVHALTTQLVTSSDGKKFGKSTGG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G++WL+ E+TSPY ++QY+ N  DADV+ + +  T L   EID       +  +   A+K
Sbjct: 238 GSLWLDPELTSPYAWYQYFVNTADADVIRYLRWFTFLSKDEIDELERETTEAPQKRTAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGL 352
            +A E+TT+VHG ++      A+   F     +          +   S+++        +
Sbjct: 298 RLAAEMTTLVHGADQTRAVELASQALFGRGDLADLPESTLAAALEEASVAEVRAGEPRTI 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V  G + S   ARR ++      NN  I +E  +           + L  GKK+  
Sbjct: 358 VDLLVATGLSDSKGAARRAVREGGAYANNVKIESEDWEPTAGGLLHGSWLVLRRGKKSFA 417


>gi|319440355|ref|ZP_07989511.1| hypothetical protein CvarD4_01176 [Corynebacterium variabile DSM
           44702]
          Length = 419

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 157/421 (37%), Positives = 232/421 (55%), Gaps = 13/421 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+ L  LS RG + Q ++   L         TAY+G+D T  SLHAGHL  L++L  LQ
Sbjct: 1   MSNILDELSWRGLVAQSTDIDALRTELDT-PTTAYVGFDPTGPSLHAGHLVPLLMLARLQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L GG T +IGDP      R M+  +   EN+E+I+   +SF+ +  G+  A+
Sbjct: 60  RAGHTPILLAGGATGMIGDPRDVG-ERSMISEETAAENVERIRKQLASFVSFE-GENAAI 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  W  S+  +D LR++G  FS+N MLS ++V+ RL+ +  +S+ EF+YM+LQA DF
Sbjct: 118 MANNMDWTGSMSVVDFLRDVGKNFSLNTMLSRDTVKRRLESD-GISYTEFSYMLLQANDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V+L +N+DCRLQ+GGSDQWGNI+ G+DL  R+    +  LT PL+T + G K GK+  G 
Sbjct: 177 VQLRRNHDCRLQIGGSDQWGNIVSGVDLNRRVDGEVVHGLTVPLVTDSEGRKFGKSTGGG 236

Query: 245 -IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+DR  +   +     EA++ 
Sbjct: 237 KLWLDPEMTSPYSWYQYFLNAADADVIRYLRWFTFLGQEELDRLAVEVEERPFKREAQRT 296

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTL 355
           +A E+TT+VHG +   K   AA   F  +  ++                 V+    +L L
Sbjct: 297 LAREMTTLVHGEDAVAKVEKAAEALFGKAELAELDEQTLASALSETEVAAVAADATILDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG   +   ARR +      +NN  IS        +D      + L  GKK      
Sbjct: 357 LVGAGLEKTKGAARRTVGEGGAYVNNERISEIDWTPSAEDLLHGSWLVLRKGKKRFAGAR 416

Query: 416 L 416
           +
Sbjct: 417 V 417


>gi|294789437|ref|ZP_06754674.1| tyrosine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482650|gb|EFG30340.1| tyrosine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 432

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 148/433 (34%), Positives = 231/433 (53%), Gaps = 21/433 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L+ L  RG I Q ++ +EL  L     +  Y G+D TA SLH GHL  +++L   Q
Sbjct: 1   MNPLLADLQARGLISQTTDIQELSNLLDSEKIALYCGFDPTADSLHIGHLLPILVLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDPSF+   R +   + +   +E I+     F+K+  G+  A+
Sbjct: 61  DAGHTPVALVGGATGMIGDPSFKAVERSLNTPETVAGWVESIRNQLKPFLKFD-GENPAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYD 183
           M NN  W  ++  +D LR+IG  FSVN ML+ E+V+ R+ + +Q +SF EF Y +LQ YD
Sbjct: 120 MENNANWFGTMNCLDFLRDIGKHFSVNAMLAKEAVKQRIEREDQGISFTEFAYALLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  G
Sbjct: 180 FAELNKRHNVKLEIGGSDQWGNITWGTETTRRLNQQSVHGMTLPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
           A+WL+   TSPY F+Q+W  + DADV  F K  T L + +ID +        +  +A++I
Sbjct: 240 AVWLDAAKTSPYQFYQFWLKVADADVYKFLKYFTFLSIKKIDEIETADKASGKKPKAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T ++HG    + A       F              +    +    VS  + ++  
Sbjct: 300 LAEEMTRLIHGDVALQAAQRITDSLFSGDESNLTEQDYAQLALDGLPTIMVSGSLNVVEA 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI-IS----------NEKLQIKLQDFDSTGNIKL 404
           +V+AG A S  EAR  +++ A+ IN ++ +           ++K QI  ++        +
Sbjct: 360 LVQAGLAQSNKEARGFVQNGAVLINGAVAVENNPHFTPEKPDDKYQITHENKRFGKYTIV 419

Query: 405 SFGKKNHIICHLC 417
             GK+NH +    
Sbjct: 420 RRGKRNHALLIWS 432


>gi|326771624|ref|ZP_08230909.1| tyrosine--tRNA ligase [Actinomyces viscosus C505]
 gi|326637757|gb|EGE38658.1| tyrosine--tRNA ligase [Actinomyces viscosus C505]
          Length = 420

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 142/418 (33%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG I Q ++   L    S G VT Y G+D TA SLH GHL  + ++  LQ
Sbjct: 1   MTDILDELQWRGLIAQHTDIDALRAALSDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P++L+GG T +IGDP  +   R +     +      ++    + + +  G   A 
Sbjct: 61  LAGHRPLALVGGATGLIGDPRAKG-ERSLNTKDVVAGWAASLQEQLENLLDFS-GDNPAQ 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y +LQA D+
Sbjct: 119 IVNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQVLQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GK+  GA
Sbjct: 179 LELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGASVHVMTNPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           IWLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+     +  +  EA++++
Sbjct: 239 IWLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLEAVTAENPKAREAQRVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG------MGLLTL 355
           A E+ T VHG +   +A  A    +     +     TI  +  +++ G        ++ L
Sbjct: 299 AHEVCTWVHGADATAQAEAATSALWGRGDLADIDEATILAATADLASGDVTVGQTTIVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +V  G     N AR+ +      INN  +++E   I  +   + G + +  G++N  +
Sbjct: 359 LVGTGLERGRNAARKTIAGGGAYINNVKVADETAVIGPEHLLAGGVVLVRKGRRNLAV 416


>gi|323339390|ref|ZP_08079674.1| tyrosine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093191|gb|EFZ35779.1| tyrosine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 418

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 148/427 (34%), Positives = 217/427 (50%), Gaps = 24/427 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ +  L  RG ++Q+S+   L  L  +  V  Y G D T  SLH GHL   M+L   Q
Sbjct: 1   MTNIIDELKWRGAVNQVSDEENLSKLLDEKSVGVYCGTDPTGDSLHVGHLIPFMMLKRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+   L+GGGT  IGDPS R   R +   +++  N E +            G+ +  
Sbjct: 61  LAGHRAFILIGGGTGSIGDPSGRSTERTLQTMEQVHHNEEALTSQMKKLF----GEDNIT 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  I  +D LR+ G  F++N ML+ E V SRL  E  +SF EF Y ILQA DF
Sbjct: 117 IVNNHDWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--EVGISFTEFTYQILQAVDF 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLS 242
             L    D +LQ+GG+DQWGNI  GIDL  +++    + FALT PL+  A GTK GK+  
Sbjct: 175 HHLLLENDVQLQIGGADQWGNITAGIDLIHKMEGSDTQAFALTIPLMLKADGTKFGKSAG 234

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           GA+WL+ E T+PY F+Q+W N DD DVV + K  T L   EI+          E  EA++
Sbjct: 235 GAVWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLGKEEIEELAKKVETEPEKREAQR 294

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGM 350
            +A E+T  VHG+E   +A   +   F   +            ++MPT++++K       
Sbjct: 295 RLAEEVTEFVHGKEAVHQAEHISKALFSGEVKDLTADEIEQGFKNMPTVTVNK----EPE 350

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +V +G   S  +AR  + + AI IN   I + +  I          +    GKK 
Sbjct: 351 NIVEWLVASGIEKSKRQAREDVTNGAIYINGDRIKDLEFMIDPSKQFDGKFVIARRGKKR 410

Query: 411 HIICHLC 417
           + +  + 
Sbjct: 411 YFLGRVI 417


>gi|310287607|ref|YP_003938865.1| Tyrosyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251543|gb|ADO53291.1| Tyrosyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 440

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 136/427 (31%), Positives = 214/427 (50%), Gaps = 20/427 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++ ++L    +   VT Y G+D TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SVLEELEWRGLISQSTDRKQLAEALNGEPVTYYCGFDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E++K      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWAERLKRQIGGILET-YGDNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A+G K GK+   A+W
Sbjct: 192 LFDEYGCTLEIGGSDQWGNLTSGMDLIRKVRGVTVNVFTSPIITDATGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D ++    K  T LP +EI+R            EA++ +A 
Sbjct: 252 LDATMLSPYRFYQFWFNRPDVEMEGLLKAFTFLPKAEIERLAEESRTNPGAREAQRTLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD------EVSRGMG------- 351
           E+T+ VHG    + A  A+   F        +   ++         E   G         
Sbjct: 312 EVTSFVHGEAATQAAIDASAALFGRGGDLASIDEDTLEAAIDGLKIEDESGAKTFASVGI 371

Query: 352 ---LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              +    VKAG   S +EAR+ +KS  + +NN+ +++E+  +   DF       +  GK
Sbjct: 372 DDRITEAGVKAGLFKSISEARKTIKSGGVYLNNNRVTDEEQTLGQDDFLHGRFALIRRGK 431

Query: 409 KNHIICH 415
           K   +  
Sbjct: 432 KALGVVE 438


>gi|149919718|ref|ZP_01908196.1| tyrosyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149819489|gb|EDM78919.1| tyrosyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 448

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 179/438 (40%), Positives = 264/438 (60%), Gaps = 25/438 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P F+S  L +L+ERGFI Q S+   +D   S G+VT Y GYD TA SLHAG L  +M +
Sbjct: 7   LPPFESSALKVLAERGFIEQGSDFAAIDAALSAGMVTFYTGYDPTADSLHAGSLLTIMAM 66

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
             LQK GH+PI LMGG T+++GDPS R E+R+++ ++ I+ N+  ++  FS F+ + TG 
Sbjct: 67  RHLQKAGHRPIVLMGGATAMVGDPSGRSETRKILTTETIRHNVSALRKQFSRFVHFDTGA 126

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             DAL+++N  WL  ++YI+ LR+IG  F+VNRM++ ++ R RL+ E  LSFLEFNY +L
Sbjct: 127 DNDALLVDNADWLLGVRYIEFLRDIGRHFTVNRMIAAKTYRDRLEGELPLSFLEFNYQLL 186

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----------------KTPKLF 222
           QAYDF+ L + +DCR+Q+GGSDQWGN+I G++L  R+                      +
Sbjct: 187 QAYDFLHLMREHDCRMQVGGSDQWGNMIAGVELIRRVAADHNKAQGQDPGEADAAPAHAY 246

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PLLTTA G KMGKT  GA+WL+ E  SPY+++QYW N  D DV +  +  T LPM 
Sbjct: 247 CLTYPLLTTADGGKMGKTAKGAVWLDPERYSPYDYYQYWINCHDRDVETLLRVFTELPMD 306

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
           ++  +A  +GK +NE+K ++A E T ++HG +EA +A TA  + F        +P I + 
Sbjct: 307 QVRELASREGKALNESKAMLAYEATRLLHGEDEAARARTATAQAFGKGEDWSALPLIEVP 366

Query: 343 KDEVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                  + LL L+V        S  +AR  +KS A+KI+   +++    I  +     G
Sbjct: 367 ----GESIKLLDLVVHEAVKGFKSKRDARERIKSGAVKIDGESVTDVNEVITAERCGEDG 422

Query: 401 NIKLSFGKKNHIICHLCG 418
            ++L  G+K  +   L G
Sbjct: 423 -LRLQTGRKRRLRVKLSG 439


>gi|167997721|ref|XP_001751567.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697548|gb|EDQ83884.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 502

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 146/423 (34%), Positives = 219/423 (51%), Gaps = 14/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + +L ERG I  +++   L   C +  +  Y G+D TA SLH G+L  +++L W Q+ 
Sbjct: 79  NVVEVLEERGLIESVTSEE-LKATCMKQRLKVYCGFDPTAESLHLGNLLGIIVLSWFQRC 137

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALM 125
           GH P++L+GG T  IGDPS + + R  +    +  N+  I+ I S+ +K         ++
Sbjct: 138 GHIPVALIGGATGRIGDPSGKSKERPALDDDTLVRNVNGIRKILSNILKGNSDEDEKVVV 197

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL  I  +D L+++G +  V  M++ ESV++RL  E  +S+ EF Y +LQ YDFV
Sbjct: 198 LNNYDWLKEISLLDFLKDVGKYARVGTMMAKESVKARLNSEDGMSYTEFTYQLLQGYDFV 257

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGA 244
            L +     +Q+GGSDQWGNI  G DL  RL   +  + LT PLL  + GTK GK+ SGA
Sbjct: 258 HLFREEGISVQIGGSDQWGNITAGTDLVRRLLQQEGAYGLTFPLLLKSDGTKFGKSESGA 317

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           IWL     SPYNF+Q+     DADV+ F KRLT + + EI   +   K  G   N  +K 
Sbjct: 318 IWLAPSSLSPYNFYQHLFATPDADVIKFMKRLTFVDIKEIEALEASMKQPGYAPNSVQKR 377

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR--------GMGLL 353
           +A E+T  VHG +   +A  A       +  +    T+     +V          G  L+
Sbjct: 378 LAEEVTRFVHGEQGLTEALKATQALAPGAAAALDSQTLEAIAQDVPSCSISYSVVGKPLV 437

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            + V  G   S    RR +K   + +NN  + +E   +  +D        LS GKKN ++
Sbjct: 438 DVSVSTGLLQSKAAVRRLIKQGGLYLNNVKVEDEGKTMVAEDIIDDKIFLLSAGKKNRLV 497

Query: 414 CHL 416
             +
Sbjct: 498 VRV 500


>gi|255037053|ref|YP_003087674.1| tyrosyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254949809|gb|ACT94509.1| tyrosyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 433

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 147/434 (33%), Positives = 223/434 (51%), Gaps = 29/434 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L  RG +H +           + +   YIG+D TA SLH G+L  +MLL   Q+ 
Sbjct: 4   DFIEELRWRGMLHDMMPGT--HEQLQKEMTCGYIGFDPTAPSLHIGNLATIMLLVHFQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+L+GG T +IGDPSF+   R  +    ++ N E I+    SF+ + +G   A M+
Sbjct: 62  GHKPIALVGGATGMIGDPSFKAAERSFLDEDTLRINQEGIRKQLESFLDFNSGDNSAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I ++  LR+ G + SVN M+S +SV+ RL  E  +SF EF+Y +LQ YDF  
Sbjct: 122 NNYDWFKDIGFLQFLRDAGKYLSVNYMMSKDSVKKRL--ETGISFTEFSYQLLQGYDFYH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-----KLFALTSPLLTTASGTKMGKTL 241
           L K+ + RLQMGGSDQWGNI  G ++  R +       K +ALT+PL+T A G+K GK+ 
Sbjct: 180 LYKHKNVRLQMGGSDQWGNITTGTEIIRRKEGDDEGYFKAYALTTPLVTKADGSKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
            G IWL+ E TSPY F+Q+W N  D D+  + +  +     EI+ +         +   +
Sbjct: 240 GGNIWLDPERTSPYQFYQFWLNQSDDDMPRYLRVFSLKGREEIEALETSHAAEPHLRVMQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISISKDE 345
           K +A E+T  +H  +  +    A+   F                      +P   IS++E
Sbjct: 300 KALAAELTIRIHSEKAYQTVLKASEVLFGKATLETLQSIEIDEFDAIFDGVPQTEISREE 359

Query: 346 VSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
                 +L L   + K+    S  EARR ++ NA+ +N   +++E   +          +
Sbjct: 360 WDNAANVLDLVSTVTKSEIYPSKGEARRAIQQNAVSVNKVKVTSEAQVLSEFALLQDKFL 419

Query: 403 KLSFGKKNHIICHL 416
            +S GKKNH +  +
Sbjct: 420 LISKGKKNH-LIRV 432


>gi|302866882|ref|YP_003835519.1| tyrosyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569741|gb|ADL45943.1| tyrosyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 429

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 145/426 (34%), Positives = 218/426 (51%), Gaps = 12/426 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +      L  RG I   +   EL  L   G  T Y+G+D TA SLH G+L Q+++ 
Sbjct: 8   LPQGRDSLTDDLLWRGLIQDSTGLDELRELLDGGSTTFYVGFDPTAPSLHIGNLMQVVMA 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P+ L+GG T  IGDP      R +   + I   +E+I+   S F+ Y  G+
Sbjct: 68  RRLQQAGHRPLLLVGGATGQIGDPKE-SAERTLNPPEVIAGWVERIREQLSPFVTYS-GE 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A ++NN  W   +  ++ LR++G  F VN+ML+ E V++RL  E  +S+ EF+Y +LQ
Sbjct: 126 NAAQLVNNLDWTGEMSVVEFLRDVGKHFPVNKMLAREVVKARL--ETGISYTEFSYQLLQ 183

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+ EL + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T A GTK GK+
Sbjct: 184 ANDYFELHRRHGCRLQYGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKADGTKFGKS 243

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEA 298
            +G IWL+ +MTSPY F+Q+W N DD DV  + +  +       E    A  +  +   A
Sbjct: 244 ETGTIWLDPQMTSPYAFYQFWVNADDRDVSRYLRYFSFRSREELEELEKATAERPQARLA 303

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGL 352
           ++ +A E+TT+VHG  E  +A  A+   F      +  P              +     +
Sbjct: 304 QRALAEELTTLVHGERETAQAVAASQALFGRGSLDELAPETLRAALTEAGLVHLDELPDV 363

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+ ++G   S  EARR +      +NN+ IS     +   D      + L  GK++  
Sbjct: 364 AGLLKESGLVPSMKEARRVIAEGGAYVNNTRISEVDATVSADDLLHGRYLVLRRGKRSFA 423

Query: 413 ICHLCG 418
              L G
Sbjct: 424 GVELRG 429


>gi|223044443|ref|ZP_03614475.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442172|gb|EEE48285.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 417

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELQWRDAINQQTNEEGLRELVENNSISLYCGVDPTGGSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP  L+GG T  IGDPS R   R +   + +QEN+E +              T   ++
Sbjct: 62  GHKPFILIGGATGTIGDPSGRTSERMLQTLETVQENVEGLSSQMKKLFGKDANVT---IV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+  +D LR  G  F++N ML+ + V SRL  ++ +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSSLTLLDFLRSYGKDFNINTMLAKDIVASRL--DKGISFTEFAYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L KN++ +LQ+GG+DQWGNI  G+DL  +      K+F LT PL+  A GTK GKT  GA
Sbjct: 177 LFKNHNVQLQIGGADQWGNITSGLDLIRKKEGNDAKVFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N DD DV+ + K  T L   EID          E  EA+K +
Sbjct: 237 IWLDPKRTSPYEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDFLEEKVKNEPEKREAQKRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VH     ++A       F  ++    +  I        S +  ++   ++  +
Sbjct: 297 AEEVTKFVHDEAALQEAQKITQALFSGNVKDLTVKEIEQGLQNMPSFNTTNKTKNIVDWL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+     S  +AR  + + AI IN   +++    +          + +  GK+N+ +  +
Sbjct: 357 VEINCEPSKRQAREDVINGAININGEKVTDINFLVNPNSAFEGKYMIIRKGKRNYFLVKV 416


>gi|301166503|emb|CBW26079.1| putative tyrosyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 423

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 226/420 (53%), Gaps = 13/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG I  +SN  EL+   ++G ++ Y GYD TA SL  G+L  ++     QK G
Sbjct: 3   FFDELKARGIIDALSNEEELEKKFNEGGMSFYCGYDPTARSLQLGNLFTIITCMRFQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP  L+GG T +IGDPS + E R ++  + ++ENI+ I+     F+ +  G   A+++N
Sbjct: 63  HKPYMLVGGATGMIGDPSGKSEERNLLDMETLKENIDAIRKQLGLFVDFECGDNAAVLVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +++ LR IG  F VN ML+ +SV+SR++ +  +S  EF+Y +LQAYDFV L
Sbjct: 123 NADWWQGLGFLEFLRTIGKRFRVNEMLNKDSVKSRIESDSGISLTEFSYQVLQAYDFVTL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ+GGSDQWGN+  G DL  ++   +++ +T PL+T  +G K GK+   A++L
Sbjct: 183 NKLHNVSLQIGGSDQWGNMTAGTDLTRKMNQNQVYCMTMPLVTDQNGKKFGKSAGNAVFL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +  MTSPY  +Q+  N DDA + +  K  T L + EI            +  A+K +A E
Sbjct: 243 DGSMTSPYKMYQFLLNQDDAIIDALLKYYTFLSLDEIAELDSKTKNEPHLRLAQKSLAQE 302

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGLLTL 355
           +T +VHG+E  + A  A    F   I            +  P++ +S + ++ G G++ +
Sbjct: 303 VTKLVHGQEGLDAALRATQFFFGEKIENVSDADVASIFEDTPSVELSSEMLNEG-GVIDM 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +     S  E RR +    I INN  I      +   D  S   + L  GKKN+ +  
Sbjct: 362 LSETPLFKSKKEVRRAIDQKGIYINNVAIEGPTQTLSKADLASETALVLRKGKKNYCVVK 421


>gi|116628855|ref|YP_814027.1| tyrosyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116094437|gb|ABJ59589.1| tyrosyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 426

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 218/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 9   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 69  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTTQMKKLF----GTENF 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 125 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +   +    F LT PL+  A GTK GK+ 
Sbjct: 183 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 242

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 243 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 303 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+  +      + +  GK+ + +
Sbjct: 363 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDNDFDGKYVIIRKGKRKYTL 422

Query: 414 CHL 416
             +
Sbjct: 423 VKI 425


>gi|322381916|ref|ZP_08055869.1| tyrosyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154117|gb|EFX46440.1| tyrosyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 457

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 39  NIIDELEWRDAINQQTDAEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLF 98

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R++   +++Q N+E +         +G G  +  M+
Sbjct: 99  GHRPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVEALTAQMKKLFGFG-GDNEVKMV 157

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  FSVN ML+ + V SRL  E  +SF EF+Y ILQ+ DF  
Sbjct: 158 NNYDWTHKMNVLDFLRDYGKNFSVNTMLAKDIVASRL--ESGISFTEFSYQILQSMDFHH 215

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K  D +LQ+GG+DQWGNI  G+DL  +      K F LT PL+  A GTK GKT  GA
Sbjct: 216 LFKEEDVQLQIGGADQWGNITSGLDLIRKKEGPDAKAFGLTIPLMLKADGTKFGKTAGGA 275

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L    I+             EA+K++
Sbjct: 276 IWLDPAKTTPFEFYQFWVNTDDRDVVKYLKFFTFLTKEVIEELAQKVETDPGKREAQKVL 335

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   ++       F   I       I     ++           ++  +
Sbjct: 336 AAEMTKFVHGEEALAQSGKITEALFSGDIKGLTADEIEQGFKDMPTFHASKESKNIVDWL 395

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+     S  +AR  + + AI +N   +S+   ++ +++      I +  GKKN+ +  L
Sbjct: 396 VELRIEPSKRQAREDITNGAISMNGERVSDLNTEVTVENSFDGRFIIIRKGKKNYSLVKL 455


>gi|146298313|ref|YP_001192904.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|259516994|sp|A5FMI1|SYY_FLAJ1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146152731|gb|ABQ03585.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 431

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 233/434 (53%), Gaps = 24/434 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + +  L  RG  H      E      + V +AYIG+D TA SLH G + Q++LL  L+
Sbjct: 1   MKNLVEELKWRGLYHDSMPGTE--EQLLKEVTSAYIGFDPTADSLHIGSMVQIILLVHLK 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI+L+GG T +IGDPS + + R ++  + + +N+  IK + S F+ + + + +A 
Sbjct: 59  NFGHQPIALVGGATGMIGDPSGKSDERNLLNEETLAKNVAGIKSVLSRFLDFNSKEQNAP 118

Query: 125 -MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
            M+NN  W+    +ID  RE+G   +VN M++ +SV+ R+    + +SF EF Y ++Q Y
Sbjct: 119 IMVNNYDWMKEFSFIDFAREVGKRITVNYMMAKDSVKKRINGEGEGMSFTEFTYQLIQGY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKT 240
           DF  L KN +C LQMGGSDQWGNI  G +L  R+     K FALT+PL+T A G+K GK+
Sbjct: 179 DFYHLYKNNNCLLQMGGSDQWGNITTGTELVRRMGGENAKAFALTTPLITKADGSKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
             G +WL+ + TS Y F+Q+W N  DAD   + K  T L    ID +         +   
Sbjct: 239 EGGNVWLDADKTSVYKFYQFWVNATDADAEKYIKIFTFLDKETIDALIAEHQTAPHLRIL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +K +A EIT  VH +EE EKA  A+   F  S                   +P   I+K 
Sbjct: 299 QKKLAEEITIFVHSKEELEKAIQASNILFGNSTADDLKKLDEKTFLEVFDGVPQAEIAKA 358

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++T++ +  GF  S  EARR L +N+I +N   I  E   +   D  +   + 
Sbjct: 359 DLENGLDIVTVLNEKTGFFKSNGEARRALTANSISVNREKIK-EDFVLTANDLINNQFVL 417

Query: 404 LSFGKKNHIICHLC 417
           L  GKKN+ +  + 
Sbjct: 418 LQSGKKNYFVIRVV 431


>gi|15827703|ref|NP_301966.1| tyrosyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230180|ref|YP_002503596.1| tyrosyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432213|sp|Q49900|SYY_MYCLE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2065227|emb|CAB08289.1| TyrS [Mycobacterium leprae]
 gi|13093254|emb|CAC31733.1| tyrosyl-tRNA synthase [Mycobacterium leprae]
 gi|219933287|emb|CAR71447.1| tyrosyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 426

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 141/426 (33%), Positives = 228/426 (53%), Gaps = 16/426 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L+ L  RG + Q ++   L     +G +T Y G+D TA SLH GHL  L++L   
Sbjct: 1   MSSSILNELGWRGLVAQSTDLDALADELRRGPMTVYAGFDPTAPSLHVGHLVPLLVLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GK 120
           Q+ GH+PI L GG T +IGDP      R +  +  + E  E+I+G    F+++      +
Sbjct: 61  QRAGHRPIVLAGGATGMIGDPRD-IGERTLNEAYTVAEWAERIRGQLERFVEFDDVAKSR 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  W   +  I+ LR++G  FS+N ML  +++R RL  +  +S+ EF+YM+LQ
Sbjct: 120 NGAIVVNNLEWTSPMSAIEFLRDVGKHFSINLMLDRDTIRRRLNGQ-GISYTEFSYMLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+ EL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A G K+GK+
Sbjct: 179 ANDYAELHQRHGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGAKLGKS 238

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINE 297
              G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +      +   
Sbjct: 239 TGGGSLWLDPEMTSPYAWYQYFINTSDADVIRYLRWFTFLLPEELVELEQTTVSRPQERA 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRG 349
           A++ +ATE+T +VHG    +    A+   F     ++         +    +++ +    
Sbjct: 299 AQRRLATELTVLVHGAAATQAVEHASRALFGQGELARLDEATLATALRETVVAELKPGNP 358

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            G++ L+V +G + S   ARR +    + +NN  I +E+   +  DF     + L  GK+
Sbjct: 359 DGIVDLLVASGLSPSRGAARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKR 418

Query: 410 NHIICH 415
           N     
Sbjct: 419 NIAGIE 424


>gi|260769578|ref|ZP_05878511.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260614916|gb|EEX40102.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 420

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 147/419 (35%), Positives = 222/419 (52%), Gaps = 13/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ RG I Q ++  EL  L S    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFHDLTARGLIAQSTSLDELTALFS-EPQTLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ ++ ++   +  +     +     +N
Sbjct: 65  HQAIALIGGATGMIGDPSFKATERTLNSAQTVQQWVDDLRQQITHTMTPHLTQ-PLRCVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVE 186
           N  W   +  ID  R+IG  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ++DF  
Sbjct: 124 NADWTGQVNVIDFFRDIGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSFDFAH 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GA+W
Sbjct: 184 LNREHQCRLQIGGNDQWGNIVSGIDLTRRLNNETVHGLTLPLITKSDGTKFGKTEGGAVW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L + EI R+           +A++I+A 
Sbjct: 244 LDASKTSPYAFYQFWLNTDDADVYRFLRYYTFLSVDEIARIEAEDAARSGKPQAQQILAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK 358
            IT  VHG      A   +   F  ++       ++      +    VS    ++ L++ 
Sbjct: 304 NITAFVHGEAGLASAQRISDALFSGAVAQLSRDELAQLELDGLPCTTVSTADDVVELLIA 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  A+S  +AR  L + AI++N   +++    +            L  GKK   +  L 
Sbjct: 364 SQLASSKRQAREWLANGAIRVNGEKMADAD--LSHSFALFDRYYLLQRGKKQFALIKLS 420


>gi|315182414|gb|ADT89327.1| tyrosyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 420

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 146/419 (34%), Positives = 220/419 (52%), Gaps = 13/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ RG I Q ++  EL  L S    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFHDLTARGLIAQSTSLDELTALFS-EPQTLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ ++ ++   +  +     +     +N
Sbjct: 65  HQAIALIGGATGMIGDPSFKATERTLNSAQTVQQWVDDLRQQITRTMTPHLTQ-PLRCVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVE 186
           N  W   +  ID  R+IG  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ++DF  
Sbjct: 124 NADWTGQVNVIDFFRDIGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSFDFAH 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GA+W
Sbjct: 184 LNREHQCRLQIGGNDQWGNIVSGIDLTRRLNNETVHGLTLPLITKSDGTKFGKTEGGAVW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L + EI              +A++I+A 
Sbjct: 244 LDASKTSPYAFYQFWLNTDDADVYRFLRYYTFLSVDEIAHIEAEDAARSGKPQAQQILAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK 358
            IT  VHG      A   +   F  ++       ++      +    VS    ++ L++ 
Sbjct: 304 NITAFVHGEAGLASAQRISDALFSGAVTQLSRDELAQLELDGLPCTTVSTADDVVELLIA 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  A+S  +AR  L + AI++N   +++    +            L  GKK   +  L 
Sbjct: 364 SQLASSKRQAREWLANGAIRVNGEKMADAD--LSHSFALFDRYYLLQRGKKQFALIKLS 420


>gi|329925452|ref|ZP_08280344.1| tyrosine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939832|gb|EGG36171.1| tyrosine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 419

 Score =  349 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 212/421 (50%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L ++  ++ Y G D T  S+H GHL   ++L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDAEGLRELTNEKSISLYCGVDPTGDSMHIGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R +   +++Q N++ + G          G     M+
Sbjct: 62  GHRPVILIGGATGTIGDPSGRQTERSLQTLEQVQANVDALTGQMKKLF-VTEGDNQIRMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF+Y ILQ+ D++ 
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDVVASRL--DSGISFTEFSYQILQSVDYLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GA
Sbjct: 179 LYQHEDVQLQIGGSDQWGNITSGLDLIRKKEGPEAKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L   +ID             EA+K +
Sbjct: 239 IWLDPNKTTPFEFYQFWANTDDRDVVKYLKYFTFLTKEQIDELAEKVQSEPHKREAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E  E+A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTRFVHGEEMLEQAKRITAALFSGDIKSLTADEIEQGFKEMPTFEATPETKNIVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  +   AI +N   +S+   ++          I +  GKKN+ +  +
Sbjct: 359 VDLGIEPSKRQAREDITKGAISMNGERVSDLGHEVTADQAIGGRFIIIRKGKKNYSLVKM 418

Query: 417 C 417
            
Sbjct: 419 S 419


>gi|19703406|ref|NP_602968.1| tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81485043|sp|Q8RH57|SYY_FUSNN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19713476|gb|AAL94267.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 406

 Score =  349 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 167/394 (42%), Positives = 240/394 (60%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEGKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +    
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSED- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYILNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ E T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPEKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|320531707|ref|ZP_08032646.1| tyrosyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320136087|gb|EFW28096.1| tyrosyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 420

 Score =  349 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 142/419 (33%), Positives = 227/419 (54%), Gaps = 13/419 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG I Q ++   L    + G VT Y G+D TA SLH GHL  + ++  LQ
Sbjct: 1   MTDILDELQWRGLIAQHTDIDALRAALTDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDP  +   R +     +      ++    + + +  G   A 
Sbjct: 61  LAGHHPLALVGGATGLIGDPRAKG-ERTLNTKDVVAGWAAGLQEQLENLLDFS-GDNPAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y +LQA D+
Sbjct: 119 IVNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQVLQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GK+  GA
Sbjct: 179 LELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGDSVHVMTNPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           IWLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+  A  +  +  EA++++
Sbjct: 239 IWLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLEAATAENPKAREAQRVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI--------SKDEVSRGMGLLT 354
           A E+ T VHG +   +A  A    +     +  +   +I        S D    G  ++ 
Sbjct: 299 AHEVCTWVHGADATAQAEAATSALWGRGDLT-DIDEATILTATSDLASSDVTVGGTTIVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           L+V  G     N AR+ +      +NN  +++E + I  +   + G + +  G++N  +
Sbjct: 358 LLVGTGLERGRNAARKTIAGGGAYLNNVKVADETVVIGPEHLLAGGVVLVRKGRRNLAV 416


>gi|268318748|ref|YP_003292404.1| hypothetical protein FI9785_253 [Lactobacillus johnsonii FI9785]
 gi|262397123|emb|CAX66137.1| tyrS [Lactobacillus johnsonii FI9785]
          Length = 420

 Score =  349 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 151/423 (35%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLVEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +AK   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWVNQDDRDVIKYLKYFTFLSREEIEDLAKKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEPKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+         + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|262202730|ref|YP_003273938.1| tyrosyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262086077|gb|ACY22045.1| tyrosyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 437

 Score =  349 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 138/421 (32%), Positives = 216/421 (51%), Gaps = 14/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L    + G  T Y G+D TA+SLHAGHL  L+ L   Q  
Sbjct: 18  DIVDELQWRGLIAQSTDLDALRARLAGGPTTLYAGFDPTAASLHAGHLVPLLTLRRFQLA 77

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T +IGDP      R M  +  + +   +I      F+      T A+++
Sbjct: 78  GHRPIVLAGGATGLIGDPRDVG-ERTMNSADTVADWAARIDAQLRRFVTIDDSPTGAVLV 136

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I+ LR++G  FS+N +L  + VR RL+ +  +S+ EF+Y++LQ++DF++
Sbjct: 137 NNMEWTRELTVIEFLRDLGKHFSMNVLLGRDLVRRRLETD-GISYTEFSYVLLQSHDFLQ 195

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAI 245
           L + YDC LQ+GGSDQWGNI+ G+DL  R++   +   T PL+T++ G K GK+   G++
Sbjct: 196 LHRRYDCALQVGGSDQWGNIVSGVDLTRRVEGATVHGFTVPLVTSSDGKKFGKSTGGGSL 255

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ E+TSPY ++QY+ N  DADVV + K  T L   EID    A  +   + +A+K +A
Sbjct: 256 WLDPELTSPYAWYQYFVNTADADVVRYLKWFTFLGREEIDALERATEETPHLRKAQKALA 315

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--------RGMGLLTL 355
            E+TT++HG      A   A +          +   +++                 ++ L
Sbjct: 316 AEMTTLIHGEANT-AAVELASQALFGRAELDALDEQTLAAAVGETTVAEYTGEPPTIVRL 374

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G + S   ARR +      +NN  I +               + +  GKK+     
Sbjct: 375 LVDTGLSDSNKAARRAVAEGGAYVNNVKIEDPDWTPTDDSLLHGRWLVVRRGKKSFAGAR 434

Query: 416 L 416
           +
Sbjct: 435 I 435


>gi|297181878|gb|ADI18056.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0200_20K23]
          Length = 422

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 222/421 (52%), Gaps = 12/421 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D LS L  RG IH  ++   L    + G +T Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 2   DILSDLEARGLIHDTTDRDALASRLAAGPITLYCGFDPTADSLHVGNLIGLLTLRRFQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PISL GG T +IGDPS RD  R ++  + +  N+E I      F+++  G++ A +L
Sbjct: 62  GHVPISLAGGATGMIGDPSGRDAERNLLDDEGLARNLEGILPQLRKFLEFE-GESAAKLL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   +  +D LR++G   +VN+M++ +SV+SR+     +SF EF+YM+LQ YD++ 
Sbjct: 121 DNRAWTVGVGVLDFLRDVGKHVTVNQMVAKDSVKSRMSEGGGISFTEFSYMLLQGYDYLW 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAI 245
           LA N +C LQ+GGSDQWGNI+ G+DL  R      +ALT PLLT   G+K GKT     I
Sbjct: 181 LADNENCELQVGGSDQWGNIVLGVDLIRRKLGQTAYALTWPLLTKPDGSKYGKTAGGETI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+    SPY F+Q W  +DD++V     +LT L + EI+       +  +    ++++A
Sbjct: 241 WLSPNKMSPYRFYQAWIGVDDSEVRKLLLQLTFLSLEEIEVLVAEHEKDPQQRVGQRMLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--------RGMGLLTL 355
            E+T +VHG   A  A  A+   FD  +    +   ++               G  ++ L
Sbjct: 301 GELTGIVHGEAAAASAMEASAVLFDPDVDITAVSESALEFVSGEVPSTAIQTLGSSIIDL 360

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V++G   S  +A+R +    I +N   +++        D      + L  GKK   +  
Sbjct: 361 LVESGLCQSRKDAKRAITEGGIYLNGGRVADADFLPSKGDLLHQKYVLLRRGKKQWHLVT 420

Query: 416 L 416
           +
Sbjct: 421 V 421


>gi|332667701|ref|YP_004450489.1| Tyrosyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332336515|gb|AEE53616.1| Tyrosyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 426

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 151/426 (35%), Positives = 225/426 (52%), Gaps = 20/426 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             DFL  L  RG +H  S    ++   S G + AYIG+D TA SL  G+  Q+MLL   Q
Sbjct: 1   MKDFLEELEWRGMLH--SKIEGIEEKLSAGKIAAYIGFDPTAPSLTIGNYVQIMLLKLFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
            +GH+PI LMGG T  IGDPS +D+ R +  + E+ +N+      F   + +  G   A+
Sbjct: 59  LSGHQPIVLMGGATGRIGDPSGKDKERELKTTDELDDNLAHQTAQFKRLLDFEGGDNPAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  +  ++  +D LR++G   +VN ML  +SV++RL  E  +SF EF+Y +LQ YDF
Sbjct: 119 MVNNLDFYRNMNVLDFLRDVGKTLTVNYMLQKDSVQNRL--ESGISFTEFSYQLLQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y C LQMGGSDQWGNI  G +   R  + K +A+T+PLLT A GTK GK+ +G 
Sbjct: 177 QCLYKQYGCILQMGGSDQWGNITAGTEFIRRNLSEKAYAITTPLLTKADGTKFGKSTAGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IW++ +MTSPY F+Q+W N DDAD+  F +  T     EI+   +    +  E K+++A 
Sbjct: 237 IWIDPKMTSPYKFYQFWINADDADIPKFTRYFTLHAKEEIEAREREFASDPRELKRLLAE 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ---------------HMPTISISKDEVSRG 349
           E+T  +HG E  +     +   F  +                    +P+  ++K   + G
Sbjct: 297 ELTKRIHGEEAYQSVLKVSELLFGRNADRDMLLSLSAEELETVSSEIPSFQVTKALFAAG 356

Query: 350 MGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
             +  L+        S  E RR ++ NAI +N   I++ +  I  +       + +  GK
Sbjct: 357 ANISDLLADHTQILASKGEVRRAIQGNAISVNKDKINSHEALIPSESLLHGKYLMVENGK 416

Query: 409 KNHIIC 414
           KN  I 
Sbjct: 417 KNKYIL 422


>gi|238021893|ref|ZP_04602319.1| hypothetical protein GCWU000324_01797 [Kingella oralis ATCC 51147]
 gi|237866507|gb|EEP67549.1| hypothetical protein GCWU000324_01797 [Kingella oralis ATCC 51147]
          Length = 434

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 153/435 (35%), Positives = 225/435 (51%), Gaps = 29/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L  RG I Q ++  EL  L     +  Y G+D TA SLH GHL  +++L   Q
Sbjct: 1   MNPLLQDLQARGLIAQTTDINELSKLLDNEKIALYCGFDPTADSLHIGHLLPVLVLRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDPSF+   R +   + +   +E IK   + F+K+   +  A+
Sbjct: 61  NAGHTPVALVGGATGMIGDPSFKAVERSLNTPETVAGWVESIKNQLTPFLKFD-SENPAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYD 183
           M NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ + +Q +SF EF+Y +LQ YD
Sbjct: 120 MENNANWFGSMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F +L   ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  G
Sbjct: 180 FAQLNLRHNVQLEIGGSDQWGNITWGTETTRRLNHKTVHGMTLPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WLN   TSPY F+Q+W  + DADV  F K  T L + +ID    A        EA++I
Sbjct: 240 AVWLNAAKTSPYQFYQFWLKVADADVYKFLKYFTFLTLEQIDAIEAADKASSAKPEAQRI 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A E+T ++HG    E A       F     S             +P + +S       +
Sbjct: 300 LAEEMTRLIHGEAALEAAQRITQSLFSGDESSLTEQDYAQLALDGLPALHVSHS---GSL 356

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDST 399
            ++  +V+AG A S  EAR  ++SNA+ IN S              ++   +        
Sbjct: 357 NVVEALVQAGLAKSNKEARGFVQSNAVLINGSPAEANNPNHAAEKPDDLYLLTDAHKRFG 416

Query: 400 GNIKLSFGKKNHIIC 414
               +  GK+NH + 
Sbjct: 417 KYTIIKRGKRNHALL 431


>gi|302796549|ref|XP_002980036.1| hypothetical protein SELMODRAFT_111886 [Selaginella moellendorffii]
 gi|300152263|gb|EFJ18906.1| hypothetical protein SELMODRAFT_111886 [Selaginella moellendorffii]
          Length = 467

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 141/424 (33%), Positives = 225/424 (53%), Gaps = 18/424 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + + IL +RG +  I+    L   C +  +  Y G+D TA SLH G+L  +++L W Q
Sbjct: 49  RRNVVEILEQRGLVESIA-GESLKKACDEKPIKVYCGFDPTAESLHLGNLLGIVVLEWFQ 107

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+ ++L+GG T  IGDPS +   R +M    I++N + I+ + +  ++       A+
Sbjct: 108 RCGHETVALLGGATGRIGDPSGKSAERPVMDEATIEKNTQGIQALLTEILQQ-----KAV 162

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W      ++ LR++G F  V  M++ ESV+ RL  E+ +SF EF Y +LQ YDF
Sbjct: 163 VLNNYDWWKEFSLLEFLRDVGKFARVGTMVAKESVKRRLALEEGISFTEFTYQLLQGYDF 222

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           V L K+    +Q+GGSDQWGNI  GIDL  + L+    + LT PLL  + GTK GK+  G
Sbjct: 223 VHLYKSNGVSVQIGGSDQWGNITAGIDLVRKLLQRDDAYGLTFPLLVKSDGTKFGKSEGG 282

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKK 300
           A+WL+ +  SPY+F+Q+     D+DV+   + LT + + EI   ++     G   N A++
Sbjct: 283 AVWLSSKFLSPYHFYQHLFATPDSDVIKMLRMLTFVELEEIEALEKSMSEPGYVANTAQR 342

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGM---GL 352
            +A E+T  VHG +  E+A          S  +     I      +    +   +    +
Sbjct: 343 RLAEEVTRFVHGEDGLEEALKVTQALAPGSTTTLDWTAIEAISKDVPSCTLDSSIVVGPV 402

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  G A S   ARR +K   I +NN+ + +E+L +   D      + LS GKKN +
Sbjct: 403 VDLCVSCGLAPSKAVARRLIKQGGIYMNNAKVDDERLLVAESDIIDGKMLLLSAGKKNKM 462

Query: 413 ICHL 416
           +  +
Sbjct: 463 VVRI 466


>gi|284036022|ref|YP_003385952.1| tyrosyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283815315|gb|ADB37153.1| tyrosyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 433

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 150/437 (34%), Positives = 229/437 (52%), Gaps = 32/437 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++ ++   E      + +  AYIG+D TA+SLH G+L  +MLL  LQ+ 
Sbjct: 2   NFIDELRWRGMLNDMTPGTE--EQLQKEMTAAYIGFDPTAASLHIGNLATIMLLVHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPS +   R  +  + +Q N   I+   + F+ +  G   A M+
Sbjct: 60  GHKPFALVGGATGMIGDPSGKAAEREFLSEETLQRNQNGIRQQLTKFLDFDCGANSAEMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I ++  LRE G   +VN M++ +SV+ RL  E  +SF EF+Y +LQ YDF  
Sbjct: 120 NNYDWFKEISFLGFLREAGKHITVNYMMAKDSVKKRL--ETGISFTEFSYQLLQGYDFYW 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--------KLFALTSPLLTTASGTKMG 238
           L K+ + RLQMGGSDQWGNI  G +   R +          + FALT+PL+T + GTK G
Sbjct: 178 LYKHKNVRLQMGGSDQWGNITTGTEFIRRKEGGAEHLEGGHQAFALTTPLVTKSDGTKFG 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEIN 296
           K+ SG +WL+  +TSPY F+Q+W N  DAD     +  T L   EI+ + +       + 
Sbjct: 238 KSESGNVWLDPALTSPYQFYQFWLNTADADCPRLIRVFTLLTREEIEELERQHNEAPHLR 297

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISIS 342
             +K IA E+TT +H     E A  A+   F                 +  + +P   +S
Sbjct: 298 ILQKAIAKEVTTRIHSESGYELAVKASEVLFGKATLETLRSIQADEFDVIFEGVPLTEVS 357

Query: 343 KDEVSRGMGLLTLIVKA---GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            +E++    +  L+  A       S  EARR +  NA+ IN + +++    +   D+   
Sbjct: 358 AEELANSKDITDLLSVASRGEVYASKGEARRAITQNAVSINKTKVTDPAAPVAF-DWLQD 416

Query: 400 GNIKLSFGKKNHIICHL 416
             I +S GKKNH++  +
Sbjct: 417 RYILISKGKKNHLLKKI 433


>gi|237740961|ref|ZP_04571442.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431005|gb|EEO41217.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 406

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 165/394 (41%), Positives = 240/394 (60%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +    
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDD- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA       F    +  + P I ++ ++ S+   LL ++V+  
Sbjct: 297 VLAYEVTKIIHGEEEATKAKETTEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVEKK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 ILKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNNN 388


>gi|315656493|ref|ZP_07909382.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315493052|gb|EFU82654.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 425

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 143/414 (34%), Positives = 229/414 (55%), Gaps = 11/414 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDKLTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP      R++   + +    ++++     F+ +  G   A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRM-TAERQLQDKETVAGWADRLQCQIERFLDFE-GGNPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKIEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+       +      A++ +A
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSRGEIEALETETKENPGKRAAQRALA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGM-GLLTLI 356
             +TT+VHG ++ E+   A+   F      +         T+ + + +V  G   +L L+
Sbjct: 305 EAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRTQVVLGQTNILHLL 364

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           V +G       A+R + S    +NN  + +E   I  +D    G +    GK+ 
Sbjct: 365 VDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDVLPGGVVLFRKGKRQ 418


>gi|256846725|ref|ZP_05552181.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717945|gb|EEU31502.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 406

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 166/394 (42%), Positives = 241/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +    
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDD- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGTLKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+  
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVEKK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 ILKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|57238792|ref|YP_179928.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578717|ref|YP_196929.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81353090|sp|Q5HCB5|SYY_EHRRW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57160871|emb|CAH57773.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417343|emb|CAI26547.1| Tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 418

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 206/414 (49%), Positives = 283/414 (68%), Gaps = 1/414 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             KSDFL +L  RG+ +Q ++  ELD L S+  V AYIG+D TA SLH G L Q+M+L +
Sbjct: 2   KLKSDFLGLLYSRGYFNQCTDLAELDQLMSKECVIAYIGFDCTARSLHIGSLMQIMILRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHKPI L+G GT+ IGDPS +D+SR ++ S +IQEN   I+ +   FI  G G +D
Sbjct: 62  LQKCGHKPIVLLGNGTTKIGDPSGKDKSRTLLSSSDIQENTLGIRKVLEKFIVCGGGVSD 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           AL++ N  WL  + YID LR IG  FSVN ML+F+SV+ RL+REQ+LSFLEFNYM+LQAY
Sbjct: 122 ALLVYNAEWLDKLNYIDFLRNIGRHFSVNNMLTFDSVKLRLEREQNLSFLEFNYMLLQAY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y+C LQ+GGSDQWGNI+ G++LG +LK P+LF LT+ LL T++G KMGKT  
Sbjct: 182 DFIELNQRYNCLLQIGGSDQWGNIVNGVELGRKLKLPQLFGLTTHLLLTSTGEKMGKTAD 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GAIWL+ EM SP ++WQY+RN+ D DV  F +  T LP++EI+++  L+G EINEAKKI+
Sbjct: 242 GAIWLDGEMYSPADYWQYFRNVKDEDVGRFLRLFTELPLTEIEKLENLKGYEINEAKKIL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG + A+  A  A++ F+ +     +P   + K E+  G+ ++ L+  +G  
Sbjct: 302 ATEATRICHGEKIAQDIAYDALKVFECND-HSGLPVFYVCKSEIELGLSVVKLLQVSGME 360

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            S + A+R +     KIN+ II +   ++ LQDF     IKLS GKK H+   L
Sbjct: 361 KSNSSAKRLINDKGCKINDIIILDVNYKLSLQDFCGMSYIKLSCGKKRHLKVVL 414


>gi|302822525|ref|XP_002992920.1| hypothetical protein SELMODRAFT_136175 [Selaginella moellendorffii]
 gi|300139265|gb|EFJ06009.1| hypothetical protein SELMODRAFT_136175 [Selaginella moellendorffii]
          Length = 467

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 142/426 (33%), Positives = 229/426 (53%), Gaps = 22/426 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + + IL +RG +  I+    L   C +  +  Y G+D TA SLH G+L  +++L W Q
Sbjct: 49  RRNVVEILEQRGLVESIA-GESLKKACDEKPIKVYCGFDPTAESLHLGNLLGIVVLEWFQ 107

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+ ++L+GG T  IGDPS +   R +M    I++N + I+ + +  ++       A+
Sbjct: 108 RCGHETVALLGGATGRIGDPSGKSAERPVMDEATIEKNTQGIQALLTEILQQ-----KAV 162

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W      ++ LR++G F  V  M++ ESV+ RL  E+ +SF EF Y +LQ YDF
Sbjct: 163 VLNNYDWWKEFSLLEFLRDVGKFARVGTMVAKESVKRRLASEEGISFTEFTYQLLQGYDF 222

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           V L K+    +Q+GGSDQWGNI  GIDL  + L+    + LT PLL  + GTK GK+  G
Sbjct: 223 VHLYKSNGVSVQIGGSDQWGNITAGIDLVRKLLQRDDAYGLTFPLLVKSDGTKFGKSEGG 282

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKK 300
           A+WL+ +  SPY+F+Q+     D+DV+   + LT + + EI   ++     G   N A++
Sbjct: 283 AVWLSSKFLSPYHFYQHLFATPDSDVIKMLRMLTFVELEEIEALEKSMSEPGYVANTAQR 342

Query: 301 IIATEITTMVHGREEAEKAATAAM----------ECFDMSIHSQHMPTISISKDEVSRGM 350
            +A E+T  VHG +  E+A               +   +   S+ +P+ ++    V    
Sbjct: 343 RLAEEVTRFVHGEDGLEEALKVTQALSPGSTTTLDWTAIEAISRDVPSCTLDSSVVVG-- 400

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L V  G A S   ARR +K   I +NN+ + +E+L +   D      + LS GKKN
Sbjct: 401 PVVDLCVSCGLAPSKAVARRLIKQGGIYMNNAKVDDERLLVAESDIIDGKMLLLSAGKKN 460

Query: 411 HIICHL 416
            ++  +
Sbjct: 461 KMVVRI 466


>gi|254302471|ref|ZP_04969829.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322663|gb|EDK87913.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 402

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 165/390 (42%), Positives = 243/390 (62%), Gaps = 6/390 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +      A+
Sbjct: 61  QHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ YI+ LR++G +FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF
Sbjct: 119 LANNADWLRNLNYIEFLRDVGEYFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA
Sbjct: 177 YVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+  EINEAKK++A 
Sbjct: 237 LWLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAEINEAKKVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+     +
Sbjct: 297 EVTKIIHGEEEATKAKEATEALFGNGNNLDNAPKIEVTDEDFSKE--LLDVLVERKILKT 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +E RR ++ N + +N+  I + K  +  +
Sbjct: 355 KSEGRRLIEQNGMSLNDEKIKDVKFTLNDK 384


>gi|156977732|ref|YP_001448638.1| tyrosyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156529326|gb|ABU74411.1| hypothetical protein VIBHAR_06520 [Vibrio harveyi ATCC BAA-1116]
          Length = 418

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 148/420 (35%), Positives = 222/420 (52%), Gaps = 13/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG + Q S+  ++  L S    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 3   LIEDLQARGLVAQASDLDQVQQLLS-EPQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +   + +   ++ +       +         +M+N
Sbjct: 62  HQAIALIGGATGMIGDPSFKATERSLNSEETVTGWVQDLSNQIQQLM-NNQVSKPMIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R++G  FSVN M+S ESV+ RL+  +Q +SF EF+Y +LQ+YDF E
Sbjct: 121 NADWVKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGN + GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 181 LNRQYGCRLQIGGNDQWGNSVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W + +DADV  F +  T L   EI  +     + K   +A++I+A 
Sbjct: 241 LDPSKTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAIEAQDKESKGKPQAQRILAE 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKDEV----SRGMGLLTLIVKA 359
           ++T  VHG E    A       F  ++    +  +  +  D +    S    L+ L+V++
Sbjct: 301 QMTRFVHGEEGLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLVES 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH-LCG 418
           G A S   AR  + +NAI ++   +        L          L  GKK+  +   + G
Sbjct: 361 GLANSKRIARELIGNNAISVSGEKVD--AQTPSLNFPLFDQYWLLQRGKKHFYLVKRIAG 418


>gi|301059196|ref|ZP_07200134.1| tyrosine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446686|gb|EFK10513.1| tyrosine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 413

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 182/412 (44%), Positives = 247/412 (59%), Gaps = 8/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + L +   RGF  Q ++   L  + +Q   T YIG+D TA SLH G L  +M L  +Q
Sbjct: 1   MENILEVFEARGFFEQSTDEVSLSQMLTQ-PTTCYIGFDPTAKSLHVGSLLPIMSLVHMQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P+ L+GGGT+++GDPS + E RR+M  +EI EN   +K   S+FI +      A+
Sbjct: 60  NAGHRPVVLVGGGTALVGDPSGKTEMRRIMSREEINENAMGLKRQLSNFIDFNND--RAV 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FSVNRML+ ES + R+  E  LSF+EFNYM+LQAYDF
Sbjct: 118 MVNNADWLAELNYVDFLRDIGRHFSVNRMLAAESYKMRM--ETGLSFIEFNYMLLQAYDF 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YDCRLQMGG+DQWGNI+ G DL  RL+   +  LT PLLTTASG KMGKT  GA
Sbjct: 176 WHLFKYYDCRLQMGGNDQWGNILAGADLIRRLEGEVVHGLTFPLLTTASGIKMGKTHKGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ EMTSPY+++QYW N DD D+  F    T L M EI+R+ KL+G EI +AKKI+A 
Sbjct: 236 VWLDAEMTSPYDYYQYWVNQDDGDIGRFLALFTLLDMDEINRLNKLKGSEIRDAKKILAY 295

Query: 305 EITTMVHGREEAEKAATAAMECFDM--SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           E T + HG+E A++A  AA   F        +  P+  I ++ +  G+    L   AG  
Sbjct: 296 EATRLCHGKENADQARAAAEGLFGGSKGGSDKSAPSYEIGRETLEDGIPAYILFENAGLC 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +  EARR +      +N+  IS     + + D    G +    GKK ++  
Sbjct: 356 KTRGEARRLISQGGGYLNDRKISVFDQAVGIDDLLEGGLLL-RAGKKRYMKI 406


>gi|291456438|ref|ZP_06595828.1| tyrosine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381715|gb|EFE89233.1| tyrosine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 440

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 136/422 (32%), Positives = 213/422 (50%), Gaps = 20/422 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ 
Sbjct: 13  NTLLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQL 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             H PI+L+GG T +IGDP  +   R +     +    +++K      ++   G      
Sbjct: 73  ACHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWADRLKNQIGGILETE-GANPVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+   A+
Sbjct: 191 HLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKSEGNAV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R            EA+K +A
Sbjct: 251 WLDATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKREAQKTLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE----------------VS 347
            E+T+ VHG    + A  A+   F    + + +   ++                      
Sbjct: 311 WEVTSFVHGEAATQAAIDASGALFGRGGNLEDIDEETLESVLDGFKVVDENGEHVFPVSK 370

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  ++     AG   S +EARR +KS  + +NN+ I +E+  +   DF +     +  G
Sbjct: 371 PGDRVIDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEADFLAGRFALIRRG 430

Query: 408 KK 409
           KK
Sbjct: 431 KK 432


>gi|315503297|ref|YP_004082184.1| tyrosyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409916|gb|ADU08033.1| tyrosyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 429

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 145/426 (34%), Positives = 218/426 (51%), Gaps = 12/426 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +      L  RG I   +   EL  L   G  T Y+G+D TA SLH G+L Q+++ 
Sbjct: 8   LPQGRDSLTDDLLWRGLIQDSTGLDELRELLDGGSTTFYVGFDPTAPSLHIGNLMQVVMA 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P+ L+GG T  IGDP      R +   + I   +E+I+   S F+ Y  G+
Sbjct: 68  RRLQQGGHRPLLLVGGATGQIGDPKE-SAERTLNPPEVIAGWVERIREQLSPFVTYS-GE 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A ++NN  W   +  ++ LR++G  F VN+ML+ E V++RL  E  +S+ EF+Y +LQ
Sbjct: 126 NAAQLVNNLDWTGEMSVVEFLRDVGKHFPVNKMLAREVVKARL--ETGISYTEFSYQLLQ 183

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+ EL + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T A GTK GK+
Sbjct: 184 ANDYFELHRRHGCRLQYGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKADGTKFGKS 243

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEA 298
            +G IWL+ +MTSPY F+Q+W N DD DV  + +  +       E    A  +  +   A
Sbjct: 244 ETGTIWLDPQMTSPYAFYQFWVNADDRDVSRYLRYFSFRSREELEELEKATAERPQARLA 303

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGL 352
           ++ +A E+TT+VHG  E  +A  A+   F      +  P              +     +
Sbjct: 304 QRALAEELTTLVHGEREMAQAVAASQALFGRGSLDELAPETLRAALTEAGLVHLDELPDV 363

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+ ++G   S  EARR +      +NN+ IS     +   D      + L  GK++  
Sbjct: 364 AGLLKESGLVPSMKEARRVIAEGGAYVNNTRISEVDATVSADDLLHGRYLVLRRGKRSFA 423

Query: 413 ICHLCG 418
              L G
Sbjct: 424 GVELRG 429


>gi|307564822|ref|ZP_07627350.1| tyrosine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346544|gb|EFN91853.1| tyrosine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 432

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 142/435 (32%), Positives = 223/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + Q+    E      + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELRWRGMLAQMMPGTE--EFLMKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   S F+ +  T    A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKKQVSKFLDFDSTEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+   ++Y  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GK
Sbjct: 179 YDFLYQYQHYGIKLQLGGNDQWGNMTTGSELIRRTLGSEAEAYCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINE 297
           T SG IWL++  T+PY F+Q+W N+ D D   + K  T+L  + I+ + +          
Sbjct: 239 TESGNIWLDRNRTTPYAFYQFWLNVSDDDAAKYIKIFTSLDQTTIEALIEEHSADPGRRI 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            +  +A E+T MVH +E+ + A  A+   F  S                 + +P   ISK
Sbjct: 299 LQHRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEISK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + ++ + G     S +E R+ +K   + +N   ++     I   D      
Sbjct: 359 DVL--GQPAVEVMNQEGMNIFPSKSEMRKLVKGGGVALNKEKLTAFDQVITANDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQKGKKNYSLIIV 431


>gi|302346026|ref|YP_003814379.1| tyrosine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150275|gb|ADK96537.1| tyrosine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 432

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 140/435 (32%), Positives = 225/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + Q+    E   +  + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELRWRGMLAQMMPGTE--EMLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +       A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGNEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  +    LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLSGESRDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+ L + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GK
Sbjct: 179 YDFLYLFEKFGVKLQLGGNDQWGNMTTGTELIRRTLGNETETYCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++     
Sbjct: 239 TESGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDNLIEEHRQDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            +  +A E+T MVH +E+ + A  A+   F  S                 + +P   +SK
Sbjct: 299 LQYRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEVSK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + +  + G     S +E R+ +K   + +N   ++     I  +D      
Sbjct: 359 DVL--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVALNKEKLAAFDQPITAEDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQKGKKNYSLIIV 431


>gi|260495313|ref|ZP_05815440.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197091|gb|EEW94611.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 406

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 166/394 (42%), Positives = 241/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +    
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDD- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|34764162|ref|ZP_00145029.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886066|gb|EAA23375.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 406

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 167/394 (42%), Positives = 240/394 (60%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +    
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDD- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGTLKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I +S ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVSDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|227888973|ref|ZP_04006778.1| tyrosine--tRNA ligase [Lactobacillus johnsonii ATCC 33200]
 gi|227850561|gb|EEJ60647.1| tyrosine--tRNA ligase [Lactobacillus johnsonii ATCC 33200]
          Length = 420

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I  +               ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEVTHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+         + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|218781459|ref|YP_002432777.1| tyrosyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|254783593|sp|B8FGS9|SYY_DESAA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218762843|gb|ACL05309.1| Tyrosyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 430

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 182/432 (42%), Positives = 248/432 (57%), Gaps = 22/432 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + L  L ERGFI Q ++ +EL+ L S   V+ YIG+D TASSLH G L  +M L  +
Sbjct: 1   MKMNVLQTLKERGFIEQTTHDQELEDLLSGEQVSCYIGFDPTASSLHVGSLVPIMSLAHM 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI+L+GGGT ++GDPS + E R+++  +++  N E I+   + FI +  G   A
Sbjct: 61  QRAGHRPIALVGGGTGLVGDPSGKTEMRKLLTLEDVNNNAEGIRAQLARFIDFDKG---A 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +  NN  WL  +KYI+ LR+ G  FSVNRM+  ES R RL+ E+ LSF+EFNYM+LQAYD
Sbjct: 118 VQENNANWLVGLKYIEFLRDFGRHFSVNRMIKAESYRMRLESEEGLSFIEFNYMLLQAYD 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L   Y C+LQMGGSDQWGNI+ GIDL  R K    + +T PL+TT++G KMGKT  G
Sbjct: 178 FLHLFNEYGCQLQMGGSDQWGNIVAGIDLIRRAKGGSAYGITFPLITTSAGIKMGKTHKG 237

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ E TSPY ++Q+W N  D DV  F    T LPM +I+++  L G E+N AK I+A
Sbjct: 238 AVWLDPERTSPYEYFQFWVNTHDDDVPRFLALFTFLPMEQINKVKDLDGAELNLAKTILA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHM------------------PTISISKDE 345
            E TT+ HGR++A  A  AA   F        +                  PT  + +  
Sbjct: 298 FEATTLAHGRDQAVGALEAAYNMFGAREIPADLLADSSIPREGAAKAEDSVPTTVMEQAR 357

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           +  G+    L  + G   S   ARR L      +NN  I +   +I L D      I L 
Sbjct: 358 LQEGVPAFELFDEIGLCASRGAARRLLGQGGGYVNNERIDSFDYKISLVDM-KDNEIILR 416

Query: 406 FGKKNHIICHLC 417
            GKKN+    L 
Sbjct: 417 AGKKNYHRLVLS 428


>gi|262067362|ref|ZP_06026974.1| tyrosine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378925|gb|EFE86443.1| tyrosine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 402

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 166/390 (42%), Positives = 241/390 (61%), Gaps = 6/390 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++   +L ERG++ Q+++  E+  L  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVYDVLKERGYLKQLTHEDEIKELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L GGGT ++GDPS R + R MM  + I  N+E IK     FI +  G   A+
Sbjct: 61  QHGHRPIALAGGGTGMVGDPSGRTDMRAMMTVETIDHNVECIKKQMQKFIDFSDG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q YDF
Sbjct: 119 LENNANWLRNLNYIEFLRDIGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y+C +Q+GG DQW N+I G++L  R    + +A+T  LLT + G KMGKT  GA
Sbjct: 177 YVLNKKYNCTMQLGGDDQWSNMIAGVELIRRKDRRQAYAMTCTLLTNSEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+   INEAKK++A 
Sbjct: 237 LWLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAAINEAKKVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG EEA KA  A    F    +  + P I +  ++ S+   LL ++V      +
Sbjct: 297 EVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIELVAEDFSKE--LLDVLVDRKILKT 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +E RR ++ N + +N+  I++ K  +   
Sbjct: 355 KSEGRRLIEQNGMSLNDEKITDVKFTLNEN 384


>gi|297170695|gb|ADI21718.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0130_15N16]
          Length = 422

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 220/420 (52%), Gaps = 12/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D LS L  RG IH  ++   L    + G V  Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 2   DILSDLEARGLIHDTTDRAALASRLAAGPVVLYCGFDPTAESLHVGNLIGLLTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PISL GG T ++GDPS RD  R ++  + + +N+E I      F+++  G++ A +L
Sbjct: 62  GHLPISLAGGATGMVGDPSGRDSERNLLDDEGLAKNLEGILPQLRQFLEFD-GESPAKLL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W      +D LR+IG   +VN+M++ +SVRSR+     +SF EF+YM+LQ YDF+ 
Sbjct: 121 DNRAWTVGTSVLDFLRDIGKHVTVNQMIAKDSVRSRMSEGDGISFTEFSYMLLQGYDFLW 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAI 245
           LA+N  C LQ+GGSDQWGNI+ G DL  R       A+T PLLT   G+K GKT     I
Sbjct: 181 LAENEKCELQVGGSDQWGNIVLGADLIRRKLGKTAHAMTWPLLTKPDGSKYGKTAGGETI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+ E  SPY F+Q W  +DD++V     +LT L + E+D           +   ++ +A
Sbjct: 241 WLSAEKMSPYRFYQSWIGVDDSEVRKLLLQLTFLSVQEVDSLVAEHEDQPHLRIGQRALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVS-RGMGLLTL 355
            EIT +VHG   A+ A  A+   FD ++    +           +   E++   + L+ L
Sbjct: 301 NEITKIVHGEPAADSAIEASQVLFDSTMDISAVSESALDFVSREVPYSEIALADVSLVDL 360

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G   S  EA+R +    + +N    S+        D      + L  GKK+  +  
Sbjct: 361 LVETGLCQSRKEAKRAVTEGGVYVNGERPSDSGFAPTSNDLLHGKYLLLRRGKKSWHLLK 420


>gi|288803474|ref|ZP_06408906.1| tyrosine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334084|gb|EFC72527.1| tyrosine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 432

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 139/435 (31%), Positives = 225/435 (51%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + Q+    E   +  + +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELRWRGMLAQMMPGTE--EMLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +       A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGNEPNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  +    LSF EF Y +LQ 
Sbjct: 119 EMVNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLSGESHDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+ L + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GK
Sbjct: 179 YDFLYLFEKFGVKLQLGGNDQWGNMTTGTELIRRTLGNETETYCLTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++     
Sbjct: 239 TESGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDNLIEEHRQDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISK 343
            +  +A E+T MVH +E+ + A  A+   F  S                 + +P   +SK
Sbjct: 299 LQYRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEVSK 358

Query: 344 DEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + +  + G     S +E R+ +K   + +N   ++     +  +D      
Sbjct: 359 DVL--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVALNKEKLAAFDQPVTAEDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLVQKGKKNYSLIIV 431


>gi|229175765|ref|ZP_04303271.1| Tyrosyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607716|gb|EEK65032.1| Tyrosyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 420

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHRREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGAEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVDTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|289765575|ref|ZP_06524953.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717130|gb|EFD81142.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 406

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 166/394 (42%), Positives = 241/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +    
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDD- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +  +
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDK 388


>gi|229824532|ref|ZP_04450601.1| hypothetical protein GCWU000282_01876 [Catonella morbi ATCC 51271]
 gi|229785903|gb|EEP22017.1| hypothetical protein GCWU000282_01876 [Catonella morbi ATCC 51271]
          Length = 422

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 225/424 (53%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L+ RG I+Q +N + L+ L ++  +  Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   SILDDLTWRGAINQQTNAQGLEELVNKKAIGLYCGVDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF-SSFIKYGTGKTDALM 125
           GHKP+ L+GGGT  IGDPS R+  R +     ++EN  K+       F+K     +   +
Sbjct: 62  GHKPVVLIGGGTGSIGDPSGRNSERTLQTMDVVKENARKLADQMNRLFLKGDVQASGFRI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  I  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF 
Sbjct: 122 VNNYDWLSQISLLDFLRDYGKHFNINNMLAKDVVASRL--EVGISFTEFSYQILQSIDFA 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSG 243
            L K YD +LQ+GG+DQWGNI  G+D   R      +++ LT PL+  + GTK GKT  G
Sbjct: 180 HLYKEYDVQLQIGGADQWGNITAGLDFIRRTEGHETEVYGLTIPLMLKSDGTKFGKTAGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E T+P+ F+Q+W N  D DVV F K  T L   EID   +       +  A K 
Sbjct: 240 AVWLDPEKTTPFEFYQFWLNQQDGDVVKFLKYFTFLSHEEIDALAVEIETQPHLRVAHKR 299

Query: 302 IATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T  VHG+E  ++A             ++   ++    ++MP  S +++E +  + 
Sbjct: 300 LAEEVTRFVHGQEALDEAIRITEALFTGEVGSLTVHEIEQGFRNMPQASAAREEANLAVW 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+      G   S  EAR  + + AI +N + +++ +  I  QD      + +  GKKN+
Sbjct: 360 LVD----TGIVKSRREAREFISNGAITLNGTKVTDVEAVITPQDAIGGKYVVVRRGKKNY 415

Query: 412 IICH 415
            +  
Sbjct: 416 TLVT 419


>gi|320096300|ref|ZP_08027871.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976766|gb|EFW08538.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 420

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 144/422 (34%), Positives = 222/422 (52%), Gaps = 11/422 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ
Sbjct: 1   MTDIIDELQWRGLLAQHTDLAALREHLASGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP++L+GG T  IGDP  +   R++  ++ +Q   +K++   S F+ +  G   A 
Sbjct: 61  LAGHKPLALVGGATGQIGDPR-QSGERQLQPTEVVQGWAQKLRDQISRFLDFE-GPAAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  IDLLR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQQMSAIDLLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C L+ GG+DQWGN++ G+DL  ++       +T+P++T A GTK GK+  GA
Sbjct: 179 LELFRRYGCTLETGGNDQWGNMVGGVDLIHKVDGADAHVMTTPIITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKII 302
           IWL+ +M SPY F+Q+W  + D DVV F K  T L  + I+ +            A+K +
Sbjct: 239 IWLDPQMMSPYAFYQFWLQVSDEDVVRFLKIFTFLDRARIEELEAEVAARPHQRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG-MGLLTL 355
           A  +T+MVHG +E  +   A    +      +         T  + +  V  G   +   
Sbjct: 299 AAAVTSMVHGDQELARVQAATKALWGGGDIKELDEASLRAATADLPRASVPLGEASVADA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  GF    + ARR + S  + +NN  +S+    +   D        L  G+KN  +  
Sbjct: 359 LVAVGFERGKSAARRTVASGGVSVNNVRVSDADAPLTGSDALPGSLALLRKGRKNLAVVE 418

Query: 416 LC 417
           L 
Sbjct: 419 LA 420


>gi|294791514|ref|ZP_06756671.1| tyrosine--tRNA ligase [Scardovia inopinata F0304]
 gi|294457985|gb|EFG26339.1| tyrosine--tRNA ligase [Scardovia inopinata F0304]
          Length = 442

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 137/421 (32%), Positives = 220/421 (52%), Gaps = 21/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q ++ ++L    +   +T Y G+D TA+SLH G+L QL+++  LQ+ G
Sbjct: 15  LLEELEWRGLVNQSTDRQQLAAALNGNPLTFYAGFDPTAASLHIGNLVQLVVMRHLQEAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP  +   R +     ++    +++   S F+    G      ++
Sbjct: 75  HHPIALVGGATGLIGDPR-QSGERTLNSKSVVEAWARRLQAQISRFLVTD-GSNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  MLS + V  RL  ++ +SF EF+Y +LQ  D++ L
Sbjct: 133 NYDWTASMSVIDFLRDVGKNFRLGTMLSKDIVARRLNSQEGISFAEFSYQVLQGNDYLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  LQ+GG+DQWGN++ G+DL  +++  ++  +TSP++T + G K GK+  GAIWL
Sbjct: 193 YDECGVTLQIGGADQWGNLVSGLDLIRKVRGVQVNVMTSPIITDSQGKKFGKSEGGAIWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +  M SPY F+Q+W N  D  V+   K  T LP  EI+   +         EA++ +A E
Sbjct: 253 DASMLSPYRFYQFWFNQPDDQVIKLLKYFTFLPKEEIERLEIEVESHPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR----------------- 348
           +T+ VHG++ A++A  AA   F     S      S+ +  +                   
Sbjct: 313 VTSFVHGQDAAQEAIDAAAALFGRGQVSLEDIDQSVLEAALDGLKVSGQTGQKEFAQARV 372

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           GM +    V AG   S +EAR+ + S  I INN  + + + +++  DF       L  GK
Sbjct: 373 GMRITQAAVAAGLVKSQSEARKTIASGGIYINNKRVEDVEQELEQSDFLHNRFALLRRGK 432

Query: 409 K 409
           K
Sbjct: 433 K 433


>gi|313122996|ref|YP_004033255.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279559|gb|ADQ60278.1| Tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 421

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 149/429 (34%), Positives = 215/429 (50%), Gaps = 19/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M  F  D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+
Sbjct: 1   MANF--DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMI 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G
Sbjct: 59  LKRFQLAGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----G 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  E  +SF EF+Y IL
Sbjct: 115 TENFRIVNNRDWLGKMTLLEFLRDYGKLFQVNNMLNKEVVASRL--ESGISFTEFSYQIL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKM 237
           QA DF  L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK 
Sbjct: 173 QAIDFYILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKF 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID            
Sbjct: 233 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLNHEEIDALEEKVKTEPWK 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRG 349
            EA+K +A E+T  VHG E  ++A T     F  ++       + I      S +  +  
Sbjct: 293 REAQKRLAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEK 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V     +S  +AR  + + AI +N   I +   ++          + +  GKK
Sbjct: 353 KNLVDFLVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKK 412

Query: 410 NHIICHLCG 418
            + + H+ G
Sbjct: 413 KYTLVHIKG 421


>gi|300813166|ref|ZP_07093541.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300495850|gb|EFK30997.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|325684851|gb|EGD26998.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 421

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 149/429 (34%), Positives = 215/429 (50%), Gaps = 19/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M  F  D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+
Sbjct: 1   MANF--DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMI 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G
Sbjct: 59  LKRFQLAGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----G 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  E  +SF EF+Y IL
Sbjct: 115 TENFRIVNNRDWLGKMTLLEFLRDYGKLFQVNNMLNKEVVASRL--ENGISFTEFSYQIL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKM 237
           QA DF  L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK 
Sbjct: 173 QAIDFYILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKF 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID            
Sbjct: 233 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLNHEEIDALEEKVKTEPWK 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRG 349
            EA+K +A E+T  VHG E  ++A T     F  ++       + I      S +  +  
Sbjct: 293 REAQKRLAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEK 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V     +S  +AR  + + AI +N   I +   ++          + +  GKK
Sbjct: 353 KNLVDFLVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKK 412

Query: 410 NHIICHLCG 418
            + + H+ G
Sbjct: 413 KYTLVHIKG 421


>gi|238852821|ref|ZP_04643226.1| tyrosine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834515|gb|EEQ26747.1| tyrosine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 420

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 218/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTTQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +   +    F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+  +      + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDNDFDGKYVIIRKGKREYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|237743205|ref|ZP_04573686.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433501|gb|EEO43713.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 406

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 166/394 (42%), Positives = 241/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEQVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +    
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRTDMRTMMTVEMIDHNVECIKKQMQKFIDFSDD- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+  
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDILVERK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 ILKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|255543457|ref|XP_002512791.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
 gi|223547802|gb|EEF49294.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
          Length = 492

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 150/434 (34%), Positives = 235/434 (54%), Gaps = 20/434 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              + + + IL ERG +  +++   L   CS   +  Y G+D TA SLH G+L  +++L 
Sbjct: 61  SIRRQNVVDILEERGLLESVTS-DNLRSACSISTLKVYCGFDPTAESLHLGNLIGIIVLS 119

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-K 120
           W Q+ GHK  +L+GG T  IGDPS +   R  +    +++NI  I    +          
Sbjct: 120 WFQRCGHKAFALIGGATGRIGDPSGKSSERPELDLDSLEKNIIGISNTLTRIFNADVNLS 179

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++LNN  W   +K +D L+++G +  V  M+  ESV+ RL+ EQ +S+ EF+Y +LQ
Sbjct: 180 NPIVVLNNYDWWKDVKLLDFLKQVGRYARVGTMIGKESVKKRLESEQGMSYTEFSYQLLQ 239

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLLTTASGTK 236
            +DF+ L KN    +++GGSDQWGNI  G +L  ++  P    + + LT PLL  + GTK
Sbjct: 240 GFDFLHLFKNKGVNVEIGGSDQWGNITAGTELIRKILQPEDGAEAYGLTFPLLLKSDGTK 299

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGK 293
            GK+  GAIWL+    SPY F+QY+ +I D DV+ F K LT L + EI   +R  K  G 
Sbjct: 300 FGKSEDGAIWLSPSFLSPYKFYQYFFSIADDDVIRFLKILTFLELDEIAELEREMKRPGY 359

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAM----------ECFDMSIHSQHMPTISISK 343
             N A++ +A E+T  VHG++   +A  A            +   +   ++ +P+ S++ 
Sbjct: 360 VPNTAQRRLAEEVTRFVHGQDGLLEAIKATEALRPGAETKLDWKTIEGIAEDVPSCSLAY 419

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           D+V   + L+ L V AG   S + ARR LK   + +NNS + +E  +++ QD      + 
Sbjct: 420 DQV-LNLSLVDLSVTAGLIDSKSAARRLLKQGGLYLNNSRVDSESKRVESQDIVEGKVLL 478

Query: 404 LSFGKKNHIICHLC 417
           LS GKKN +I  + 
Sbjct: 479 LSAGKKNKVIVRIS 492


>gi|163753361|ref|ZP_02160485.1| putative tyrosyl-tRNA synthetase 1 [Kordia algicida OT-1]
 gi|161327093|gb|EDP98418.1| putative tyrosyl-tRNA synthetase 1 [Kordia algicida OT-1]
          Length = 434

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 152/437 (34%), Positives = 231/437 (52%), Gaps = 25/437 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S+ +  L  RG IH I    E     ++ + TAYIG+D T+ SLH G L  ++LL  L
Sbjct: 1   MNSNLVEELRWRGMIHDIMPGTE--EQLNKEMTTAYIGFDPTSDSLHIGSLVPIILLMHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
            K GHKPI+L+GG T +IGDPS + + R ++    +  N+  IK + S F+ +G  + +A
Sbjct: 59  HKAGHKPIALVGGATGMIGDPSGKSDERNLLTEDILNHNVAGIKRVLSRFLDFGGSEANA 118

Query: 124 LM-LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQA 181
            + +NN  W+    +ID  R++G   +VN M++ +SV+ RL  E   +SF EF Y ++Q 
Sbjct: 119 PILVNNYDWMKDFSFIDFARDVGKRITVNYMMAKDSVKKRLSDEGNGMSFTEFTYQLIQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---KLFALTSPLLTTASGTKMG 238
           YDF  L K ++C LQMGGSDQWGNI  G +L  R+ T    K +A+T PL+T A G+K G
Sbjct: 179 YDFYHLHKAHNCLLQMGGSDQWGNITTGTELVRRMNTEEAAKAYAMTCPLITKADGSKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           KT  G +WL+ + TS Y F+Q+W N  DAD   + K  T L    ID       +     
Sbjct: 239 KTAGGNVWLDADKTSVYKFYQFWLNTSDADAEKYIKIFTFLDKETIDALIAEHKEAPHTR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISIS 342
             +K +A E+TT+VH +E+ E A  A    F  S                   +P   I 
Sbjct: 299 ALQKRLAEEVTTLVHSKEDLENAQKATQILFGKSTSEDLKQLDEQTFMDVFDGVPQAEIE 358

Query: 343 KDEVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + ++  G+ ++  +  K  F  S  EARR LK N++ +N + +  E  +I   D  +   
Sbjct: 359 RADIEEGLDMIAALAAKTNFLASNGEARRALKENSVAVNKTKVK-EDYKITTSDLINDKF 417

Query: 402 IKLSFGKKNHIICHLCG 418
           + +  G+K + +  + G
Sbjct: 418 VTIQRGRKKNFLLIVKG 434


>gi|68171326|ref|ZP_00544724.1| Tyrosyl-tRNA synthetase, class Ib [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658503|ref|YP_506920.1| tyrosyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123493977|sp|Q2GI13|SYY_EHRCR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|67999253|gb|EAM85905.1| Tyrosyl-tRNA synthetase, class Ib [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599960|gb|ABD45429.1| tyrosyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 418

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 200/414 (48%), Positives = 275/414 (66%), Gaps = 1/414 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             +S FLS L  RG+  Q +N   LD L SQ  V AYIG+D TA SLH G L Q+M+L  
Sbjct: 2   KLESQFLSFLYSRGYCSQCTNISMLDQLMSQQCVHAYIGFDCTAKSLHVGSLIQVMILRH 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHKPI L+G GT+ IGDPS +D+SR M+ + EI+EN   I  +   FI +G G  D
Sbjct: 62  LQKFGHKPIILLGDGTTKIGDPSGKDKSRAMLSASEIEENALGIYEVLKKFIVFGDGPHD 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           AL++ N  WL  + YI+ LR+IG  FSVN ML+F+SVR RL+REQ+LSFLEFNYM+LQ+Y
Sbjct: 122 ALLVRNAEWLNGLNYIEFLRDIGKHFSVNNMLTFDSVRLRLEREQNLSFLEFNYMLLQSY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + Y+C LQ+GGSDQWGNI+ G++LG +L+ P+LF LT+ LL T+SG KMGKT  
Sbjct: 182 DFVELNRRYNCLLQIGGSDQWGNIVSGVELGRKLRLPELFGLTTNLLLTSSGEKMGKTAQ 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SP ++WQY+RN+ D DV  F +  T L ++EI  +  LQG EINE+KKI+
Sbjct: 242 GAVWLDGNMYSPVDYWQYFRNVKDEDVGRFLRLFTELSLNEIRNLELLQGHEINESKKIL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG E A+  A  A++ F+ +     +    + K +V  G+ ++ L+      
Sbjct: 302 ATEATRICHGEEIAQSVANDALKVFECNDD-SGLSVFYVKKYDVELGLPIIKLLQMCEME 360

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            S++ ARR +     KIN+ ++ +   ++ L+DF +T  +KLS GKK H+   L
Sbjct: 361 KSSSSARRLINDKGCKINDVVVLDMNYKLSLKDFYNTSYVKLSCGKKRHLKVML 414


>gi|297180971|gb|ADI17174.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_08D07]
          Length = 425

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 152/416 (36%), Positives = 237/416 (56%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LSERG + Q+S+   L     +  V  Y G+D TA SLH G L  L+ L   Q+ G
Sbjct: 8   ILDELSERGLVAQVSDETGLREHLKKRRV-VYCGFDPTADSLHVGSLVPLIALNRFQRAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI L+GG T +IGDPSFR + R ++ S  +++ +  ++     F+ + TG+  AL++N
Sbjct: 67  HKPILLLGGATGLIGDPSFRSDERLLIDSDVVEKRVVSLRKQVEPFLSF-TGENSALIVN 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVE 186
           N  W   +  ID LR+IG +FS+N+M+  ++V+ RL    Q +SF EF YMILQ+ DF+E
Sbjct: 126 NLDWSNKVLLIDFLRDIGKYFSINKMIQRDAVKPRLDAEGQGISFTEFTYMILQSMDFLE 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           LA + +C +Q+GGSDQWGN++ GIDL  R  + + +ALT PL+T A GTK GK+ +GA+W
Sbjct: 186 LAVSNECTIQIGGSDQWGNMVSGIDLIRRKLSLESYALTLPLITKADGTKFGKSEAGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L +  TSPY+F+Q+W N  DADV  F K  T +P  EI    +   +  E   A++++A 
Sbjct: 246 LERSKTSPYSFYQFWLNTSDADVEKFLKFFTFIPSEEIVETIQRTKEKPEDRIAQRVLAD 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMS------IHSQHMPTISISKDEVSRGMGLLTLIVK 358
            +T  VHG ++   +   +   F  +         + +    +       G GLL+ +V 
Sbjct: 306 HMTQFVHGEKDRLASRRISSALFSENFDGLEQGDLEQLLQDGLPSRRCKSGEGLLSTMVS 365

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +  A S  EAR+ +    I +N S+I++  + +  +       + L  GKK++++ 
Sbjct: 366 SNLAKSNGEARKLIHGRGISVNGSVITDPSISLDFEGALYGQYLLLKKGKKSYVLL 421


>gi|296328752|ref|ZP_06871266.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154087|gb|EFG94891.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 402

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 166/390 (42%), Positives = 239/390 (61%), Gaps = 6/390 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +      A+
Sbjct: 61  QHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSED--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF
Sbjct: 119 LANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA
Sbjct: 177 YILNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A 
Sbjct: 237 LWLDPEKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      +
Sbjct: 297 EVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRKIIKT 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +E RR ++ N + +N+  I + K  +   
Sbjct: 355 KSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 384


>gi|171914524|ref|ZP_02929994.1| Tyrosyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 433

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 138/432 (31%), Positives = 232/432 (53%), Gaps = 21/432 (4%)

Query: 7   DFLSILSERGFIHQISNPRE-------LDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           +    L  RG +   ++  E       L    +   +T Y G+D TA SLH GH+  L+ 
Sbjct: 2   NIFEDLQFRGLVADFTSVPESRADLLPLPDRLAAKAITLYCGFDPTADSLHVGHIVPLLA 61

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH PI++ GG T  IGDPS +   R+++  ++I+ N+E ++   +  + + + 
Sbjct: 62  LRRFQLAGHHPIAVAGGATGSIGDPSGKSAERQLLTQEQIKANVEAVRPQLAKLLDFDSP 121

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMI 178
              A +++N  W+  I Y+D LR++G  F+VN+M++ ESVR+R++     +S+ EF+YM+
Sbjct: 122 VNPARLMDNADWIGPISYLDFLRDVGKHFTVNQMVAKESVRARMEDRDVGISYTEFSYML 181

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+YD+  LA+   C LQ+GGSDQWGNI  GIDL  +      + LT PL+T + GTK G
Sbjct: 182 LQSYDYFHLAQVAGCELQIGGSDQWGNITTGIDLVRKKLGRHAYGLTMPLITKSDGTKFG 241

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           K+  GAIWL+ + TS Y F+Q+W N DD DVV + K  T LP  EI  +           
Sbjct: 242 KSEGGAIWLDPKKTSIYKFYQFWINSDDRDVVKYLKFFTFLPHDEIRALEAEHETNPGAR 301

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEV 346
           +A + +A  ITT++HG +    A  A+   F  S+           S+ +P  +++ D++
Sbjct: 302 KAHQALARSITTLIHGEQATSDAVRASEILFGGSLEGISASTLQTLSEEVPNATVTADQL 361

Query: 347 -SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              G+ L+  +V +G + S  +AR+ ++   + +N    +    ++ +        + L 
Sbjct: 362 GGEGLPLVEALVLSGLSQSKGQARKDVEGGGVYVNGDRATAATDRLAVDRTLHGRYVLLR 421

Query: 406 FGKKNHIICHLC 417
            G++N+ +  + 
Sbjct: 422 KGRRNYALLSVA 433


>gi|58616779|ref|YP_195978.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|75356543|sp|Q5FF40|SYY_EHRRG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58416391|emb|CAI27504.1| Tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 418

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 204/414 (49%), Positives = 283/414 (68%), Gaps = 1/414 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             KS FL +L  RG+ +Q ++  ELD L S+  V AYIG+D TA SLH G L Q+M+L +
Sbjct: 2   KLKSGFLGLLYSRGYFNQCTDLAELDQLMSKECVIAYIGFDCTARSLHIGSLMQIMILRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHKPI L+G GT+ IGDPS +D+SR ++ S +IQEN   I+ +   FI  G G +D
Sbjct: 62  LQKCGHKPIVLLGNGTTKIGDPSGKDKSRTLLSSSDIQENTLGIRKVLEKFIVCGDGVSD 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           AL++ N  WL  + YID LR IG  FSVN ML+F+SV+ RL+REQ+LSFLEFNYM+LQAY
Sbjct: 122 ALLVYNAEWLDKLNYIDFLRNIGRHFSVNNMLTFDSVKLRLEREQNLSFLEFNYMLLQAY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y+C LQ+GGSDQWGNI+ G++LG +LK P+LF LT+ LL T++G KMGKT +
Sbjct: 182 DFIELNQRYNCLLQIGGSDQWGNIVNGVELGRKLKLPQLFGLTTHLLLTSTGEKMGKTAN 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+ EM SP ++WQY+RN+ D DV  F +  T LP++EI+++  L+G EINEAKKI+
Sbjct: 242 GAVWLDGEMYSPADYWQYFRNVKDEDVGRFLRLFTELPLTEIEKLENLKGYEINEAKKIL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG + A+  A  A++ F+ +     +P   + K E+  G+ ++ L+  +G  
Sbjct: 302 ATEATRICHGEKIAQDIAYDALKVFECND-HSGLPVFYVCKSEIELGLSVVKLLQVSGME 360

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            S + A+R +     KIN+ II +   ++ LQDF     IKLS GKK H+   L
Sbjct: 361 KSNSSAKRLINDKGCKINDIIILDVNYKLSLQDFCGMSYIKLSCGKKRHLKVVL 414


>gi|260427816|ref|ZP_05781795.1| tyrosyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260422308|gb|EEX15559.1| tyrosyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 455

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 215/452 (47%), Positives = 276/452 (61%), Gaps = 41/452 (9%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGFLADCTDYQGLDEALSKGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG----- 119
           KTGHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI+ +K +F+ ++KY        
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIDGMKQVFAKYLKYQEPAEERF 125

Query: 120 -----------------------KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                                   TDALMLNN  WL  + Y++ LR+IG  FSVNRMLSF
Sbjct: 126 WAGRMARPTDQRDINWAIDEEKATTDALMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSF 185

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ESV+SRL REQSLSFLEFNYMILQAYDF+EL + Y C LQMGGSDQWGNII GIDL  R+
Sbjct: 186 ESVKSRLDREQSLSFLEFNYMILQAYDFLELNRRYGCLLQMGGSDQWGNIINGIDLTRRV 245

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              +++ LTSPLLTT+ G KMGK+  GA+WLN +M SPY+FWQ+WRN  DADV  F K  
Sbjct: 246 LDHEIYGLTSPLLTTSDGRKMGKSQGGAMWLNADMLSPYDFWQFWRNTTDADVGRFLKLY 305

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           T LP+ E +R+  L G EIN AK I+A E+TT+ HG E A  A   A E F+       +
Sbjct: 306 TELPLEECERLGALGGSEINAAKIILANEVTTLCHGAEAAAAAEATAREVFEKGGIGDDL 365

Query: 337 PTISISKDEV---------SRGM--GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           P   +S   +           GM     ++ V A  A S  +A+R +  N   +N+  + 
Sbjct: 366 PRFDLSDIPLLPADVVEAQEPGMYCAAASIFVGAKLAKSGKDAKRLISENGALVNDVPVK 425

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
                IK  D      +KLS GKK H +  L 
Sbjct: 426 AAFPFIKADDLTD--YVKLSAGKKRHALVKLA 455


>gi|154488639|ref|ZP_02029488.1| hypothetical protein BIFADO_01946 [Bifidobacterium adolescentis
           L2-32]
 gi|154082776|gb|EDN81821.1| hypothetical protein BIFADO_01946 [Bifidobacterium adolescentis
           L2-32]
          Length = 435

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 134/422 (31%), Positives = 215/422 (50%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SVLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E++K      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWAERLKAQIGGILEVE-GSNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWTASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQGNDFLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+W
Sbjct: 192 LFDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D+++ +  K  T LP +EI+R            EA++ +A 
Sbjct: 252 LDGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKAEIERLVEESKTNPGAREAQRTLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-----------DEVSRGMGLL 353
           E+T++VHG E   +A  AA   F        +   ++              + + G  + 
Sbjct: 312 EVTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDGEFAKAAVGDRVA 371

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF       +  GKK   +
Sbjct: 372 EAGMKAGLFKSISEARKTIKAGGVYLNNARVEDEEQVLNENDFLHGRFALIRRGKKALGV 431

Query: 414 CH 415
             
Sbjct: 432 VE 433


>gi|116513427|ref|YP_812333.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275803|sp|Q04CC7|SYY_LACDB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116092742|gb|ABJ57895.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 421

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 148/429 (34%), Positives = 214/429 (49%), Gaps = 19/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M  F  D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+
Sbjct: 1   MANF--DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMI 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G
Sbjct: 59  LKRFQLAGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----G 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  +  +SF EF+Y IL
Sbjct: 115 TENFRIVNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRL--KNGISFTEFSYQIL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKM 237
           QA DF  L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK 
Sbjct: 173 QAIDFYILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKF 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID            
Sbjct: 233 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWK 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRG 349
            EA+K +A E+T  VHG E  ++A T     F  ++       + I      S +     
Sbjct: 293 REAQKRLAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGEEK 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V     +S  +AR  + + AI +N   I +   ++          + +  GKK
Sbjct: 353 KNLVDFLVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKK 412

Query: 410 NHIICHLCG 418
            + + H+ G
Sbjct: 413 KYTLVHIKG 421


>gi|110637940|ref|YP_678147.1| tyrosyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123163593|sp|Q11UV9|SYY_CYTH3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110280621|gb|ABG58807.1| tyrosyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 427

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 147/430 (34%), Positives = 220/430 (51%), Gaps = 24/430 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG +H I    E      +   TAY+G+D TASSL  G+L  +M+L   Q
Sbjct: 1   MKNFVEELKWRGMLHDIMPGTE--EYLLKNQTTAYVGFDPTASSLTIGNLVTIMMLVHFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDPS R E R  +  + ++ N E I+   + F+ +  G   A 
Sbjct: 59  HAGHIPMALVGGATGMIGDPSGRSEERNFLSEETLRLNQEGIRKQLTKFLDFDCGANSAK 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   I +++ LR+ G   +VN M++ +SV+ RL  E  L+F EF+Y +LQ YDF
Sbjct: 119 LVNNYDWFKGIGFLEFLRDAGKHLTVNYMMAKDSVKKRL--EVGLTFTEFSYQLLQGYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +  + RLQMGGSDQWGNI  G +L  R+     FALT+PLLT A GTK GK+  G 
Sbjct: 177 CHLYQKENVRLQMGGSDQWGNITSGTELIRRMADGTAFALTTPLLTKADGTKFGKSAGGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+  +TSPY F+Q+W N  D DV  F +  T L    I+       +       +K +
Sbjct: 237 IWLDAALTSPYKFYQFWLNSADEDVSRFIRIFTLLSKEAIEALEAEHAKAPHERLLQKTL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH--------------SQHMPTISISKDEVSR 348
           A +IT  VH  E+ E A  A+   F  S+                + +P I IS+  +  
Sbjct: 297 AKDITIRVHSEEDYEMAIKASEILFGKSVTEDLQALNESTLLSVFEGIPLIEISRSILDE 356

Query: 349 GMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              +L L   +  +    S  EAR+ ++   + IN   I++ +  +      +   +   
Sbjct: 357 KPSVLDLLSTLTNSEVFPSKGEARKMIQGGGVSINKIKINSSEEIVNYPLLLNNYLLV-Q 415

Query: 406 FGKKNHIICH 415
            GKKN+ +  
Sbjct: 416 KGKKNYYLLR 425


>gi|325125059|gb|ADY84389.1| Tyr-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 421

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 149/429 (34%), Positives = 215/429 (50%), Gaps = 19/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M  F  D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+
Sbjct: 1   MANF--DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMI 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G
Sbjct: 59  LKRFQLAGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----G 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  E  +SF EF+Y IL
Sbjct: 115 TENFRIVNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRL--ENGISFTEFSYQIL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKM 237
           QA DF  L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK 
Sbjct: 173 QAIDFYILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKF 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID            
Sbjct: 233 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWK 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRG 349
            EA+K +A E+T  VHG E  ++A T     F  ++       + I      S +  +  
Sbjct: 293 REAQKRLAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEK 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V     +S  +AR  + + AI +N   I +   ++          + +  GKK
Sbjct: 353 KNLVDFLVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKK 412

Query: 410 NHIICHLCG 418
            + + H+ G
Sbjct: 413 KYTLVHIKG 421


>gi|116333090|ref|YP_794617.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098437|gb|ABJ63586.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 419

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 142/423 (33%), Positives = 204/423 (48%), Gaps = 16/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             +  L  RG I+Q ++   L  L  +  V  Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   SIIDELKWRGAINQQTDEAGLAELVDEKSVGLYAGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P  L+GG T  IGDPS +   R +    ++  N   +                  ++
Sbjct: 62  GHRPHILIGGATGSIGDPSGKKAERVLQTMDQVHHNEACLTKQMEHLFGQDGSFK---IV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKVSLLDFLRDYGKLFNVNNMLNKEVVASRL--EVGISYTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GG+DQWGNI  GIDL  + K    K + LT PLL  A GTK GK+  G 
Sbjct: 177 LYEAEDVQLQIGGADQWGNITAGIDLIHKQKGADAKAYGLTIPLLLKADGTKFGKSEGGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ F K  T L   EI +   A     E  EA+  +
Sbjct: 237 IWLDPEKTSPYEFYQFWINTDDRDVIKFLKYFTFLDQDEIKQLADAVATHPEKREAQIRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG+E   +A       F   + +     I     ++           ++  +
Sbjct: 297 AEEVTAFVHGKEAVVEAQHITKALFSGDVAALTASEIEQGFKKMPAVTVSPAKKNIVEWL 356

Query: 357 V-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V      +S  +AR  L + AI+IN   +++   +I          + +  GKK + +  
Sbjct: 357 VDDTQIESSRRQAREDLTNGAIRINGEKVTDTDAEIDPTSAFDGKFVIVRRGKKRYFLAR 416

Query: 416 LCG 418
           + G
Sbjct: 417 VVG 419


>gi|261878996|ref|ZP_06005423.1| tyrosine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334381|gb|EFA45167.1| tyrosine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 432

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 138/435 (31%), Positives = 216/435 (49%), Gaps = 27/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +F+  L  RG + QI    E      Q +V+AY+G D TA SLH GHL  +M+L  LQ
Sbjct: 1   MKNFVEELKWRGMLAQIMPGTE--EYLLQNMVSAYLGTDPTADSLHIGHLCGIMMLRHLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           + GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ +   +   A
Sbjct: 59  RCGHKPYLLVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKKQCAKFLDFDGNELNKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQA 181
            ++NN  W+    ++D  R +G   +VN M++ ESV+ RL       LSF EF Y +LQ 
Sbjct: 119 ELVNNYDWMKDFTFLDFARTVGKHITVNYMMAKESVQQRLNGTARDGLSFTEFTYQLLQG 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+ L ++   RLQ+GG+DQWGN+  G +L  R      + FALT PL+T A G K GK
Sbjct: 179 YDFLHLYQHNGVRLQLGGNDQWGNMTTGTELIRRTLGNDVEAFALTCPLITKADGKKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           T SG +WL++  T+PY F+Q+W N+ D D   + K  T L    I        +      
Sbjct: 239 TESGNVWLDRNRTTPYTFYQFWLNVSDDDAERYIKIFTDLDRETIAALVAEHTEDPGRRT 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISISK 343
            ++ +A E+TTMVH +E+ + A  A+   F                +   + +P   + +
Sbjct: 299 LQRRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDQLAQLDEATLNDVFKDVPHYELDR 358

Query: 344 DEVSRGMGLLTLIVKA--GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++  G   + L  +       S  E R+ +K   + +N   +      +   D      
Sbjct: 359 TQL--GGKAIDLFCQEDWEIFPSKGEMRKMVKGGGVSLNKEKLVAFDQPVTADDLIDGKY 416

Query: 402 IKLSFGKKNHIICHL 416
           + +  GKKN+ +  +
Sbjct: 417 LLMQRGKKNYYLISV 431


>gi|329666572|gb|AEB92520.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 420

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  +I S  +P I        S +       ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNIKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +++     S  +AR  +K+ AI +N     +    I+         + +  GK+ + +
Sbjct: 357 EFLIETKIEPSKRQAREDVKNGAIYVNGERQDDIDFIIEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|116334768|ref|YP_796295.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|75381580|sp|Q7B9Y9|SYY_LACBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34978541|gb|AAQ83557.1| tyrosyl-tRNA synthetase [Lactobacillus brevis]
 gi|116100115|gb|ABJ65264.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 418

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 220/420 (52%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q ++   L  L S+  ++ Y G D T  S+H GHL   M++   +  
Sbjct: 2   NIIDELTWRGAINQQTDAEGLKKLTSEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFELA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R++    ++Q N++ +            G ++  M+
Sbjct: 62  GHHPYILIGGATGSIGDPSGRKTERQLQTMDKVQHNVKALSRQMQRLF---GGDSNVTMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLDFLRDYGKLVNINTMLAKDIVASRL--DTGISFTEFTYQILQSVDFLT 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L  +++ +LQ+GG+DQWGNI  GIDL  ++K     ++ LT PL+  A GTK GKT  GA
Sbjct: 177 LHNDHNIQLQIGGADQWGNITAGIDLIHKIKGADEAVYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N DD DV+ + K  T L   EI++   A     E   A++ +
Sbjct: 237 IWLDADKTSPYEFYQFWLNQDDRDVIRYLKFFTFLGQDEINQLAAAVEDEPEKRLAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E  E A   +   F   I    +  +  + ++V      S    ++ L+
Sbjct: 297 AEEVTRFVHGEEALESAQHISEILFSGDIQRLTLTEVQEAFEKVPNVSINSEPTNIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +     S  +AR  + + AI IN    ++   Q+  +   S   + +  GKKN+ +  +
Sbjct: 357 TETAIEPSRRQAREDITNGAITINGERCTDTDAQLNPKTNFSGKFMVIRRGKKNYFLAKV 416


>gi|324329009|gb|ADY24269.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 419

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 213/420 (50%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +      K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDSEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVDTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|219684522|ref|ZP_03539465.1| tyrosyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671884|gb|EED28938.1| tyrosyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 405

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 157/412 (38%), Positives = 240/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L++L +RGF+ Q ++   L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALNLLYKRGFLKQCTSLEVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       ++    + + 
Sbjct: 61  QHGHMPIILIGDSTAKIGDPSGKSEMRKILSSEEINNNALSIKNQLQRITRF----SSSC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNI+ G+DL  R    + F +T PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIVSGVDLIRRKMGVEAFGVTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIESISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLINLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + N+   I  +DF +   I+L  GKK  +   L
Sbjct: 355 KSEGRRLINSGGVYINGKRVENQNHCITREDF-NNNEIELRVGKKKFLRIVL 405


>gi|330467036|ref|YP_004404779.1| tyrosyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328810007|gb|AEB44179.1| tyrosyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 435

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 217/424 (51%), Gaps = 14/424 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PA +  F   L  RG I   ++P EL  L        Y+G+D TA SLH GHL Q+    
Sbjct: 10  PAGRDSFTDDLRWRGLIQDSTDPDELRALLDGPAAVFYVGFDPTAPSLHVGHLMQVATAR 69

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P+ L+GG T  IGDP      R +   + +   +++I+   + F+ Y TG  
Sbjct: 70  RLQLAGHRPLLLVGGATGQIGDPKE-SAERTLNPPEVVAGWVQRIRDQLAPFVSY-TGDN 127

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            AL++NN  W   +  ++ LR++G  F VN+ML+ E VR+RL  E  +SF EF+Y +LQA
Sbjct: 128 AALLVNNLEWTGEMSVVEFLRDVGKHFPVNKMLAREVVRARL--ESGISFTEFSYQLLQA 185

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF EL + + C+LQ GGSDQWGNI  G+D   R     + A T+PL+T + G+K GKT 
Sbjct: 186 NDFFELHRRHGCQLQFGGSDQWGNITAGVDYVRRRGAGPVQAFTTPLVTKSDGSKFGKTE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAK 299
            GAIWL+ EMTSPY F+Q+W N+DD DV  + +  +     E++       +      A+
Sbjct: 246 GGAIWLDPEMTSPYAFYQFWINVDDRDVGRYLRYFSFRSREELEALEKETAERPASRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT----- 354
           + +A E+TT+VHG  E  +   A+   F        +   ++       G+  L      
Sbjct: 306 RALAEELTTLVHGEREMAQVVAASQALFGRG-SLADLSAATLRAALTEAGLVRLDKLPEA 364

Query: 355 --LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+ ++G   S  EARR +      +NN  ++     I   D      + L  GK++  
Sbjct: 365 AALLKESGLVPSMKEARRVIAEGGAYVNNVRVTEADAVIGADDLLHGRYLVLRRGKRSFA 424

Query: 413 ICHL 416
              L
Sbjct: 425 GVEL 428


>gi|227509207|ref|ZP_03939256.1| tyrosine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191353|gb|EEI71420.1| tyrosine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 418

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 142/425 (33%), Positives = 218/425 (51%), Gaps = 24/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L  L ++  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILDDLKWRGAINQETDHDGLYDLVNKKSVGLYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT  IGDPS +   R +    +++ N E +                  ++
Sbjct: 62  GHHPVILIGGGTGSIGDPSGKKSERVLQTMDQVRHNQEALTRQMEKLFGQDGSFE---IV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F++N M+  E + SRL  E  +SF EF Y ILQ  DF+ 
Sbjct: 119 NNYDWLSKMSLLDFLRDYGKLFNINTMIRKEIIASRL--EAGISFTEFTYQILQGVDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D ++Q+GG+DQWGNI  GIDL  +++    + + +T PLL  A GTK GK+  G 
Sbjct: 177 LFRYNDVQVQLGGADQWGNITSGIDLIHKVEGSDAQAYGMTIPLLLKADGTKFGKSEGGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV + K  T L  +EID          E  EA++ +
Sbjct: 237 VWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDKTEIDDLEKKVQTHPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+T  VHG +  E A   +   F   +            ++MPT+++S    S  + +
Sbjct: 297 AQEVTKFVHGPKAVESAERISKALFSGEVADLTTTEIEQGFKNMPTVNVS----SEPLNI 352

Query: 353 LTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  +V A    +S  +AR  + + AI+IN + I +   +I   D      + +  GKK +
Sbjct: 353 VQWLVDATKIESSRRQAREDINNGAIRINGAKIQDTDFEINPSDKFDGKFVIVRRGKKRY 412

Query: 412 IICHL 416
            +  +
Sbjct: 413 FLARV 417


>gi|89889440|ref|ZP_01200951.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517713|gb|EAS20369.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 439

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 157/431 (36%), Positives = 239/431 (55%), Gaps = 24/431 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F   L  RG IH I    E   L  + VVT YIG+D TA SLH G + Q++LL  LQ++
Sbjct: 11  NFAEELRWRGMIHDIMPGTE--ELLEKEVVTGYIGFDPTADSLHIGSMVQIILLMHLQRS 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--GTGKTDAL 124
           GH+PI+L+GG T +IGDPS + + R ++  + + +NI  ++ + S FI +  G   T A+
Sbjct: 69  GHRPIALVGGATGMIGDPSGKSDERNLLTQEILDKNIAGVQSVLSRFIDFEKGDDATRAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  W+ +   ID  R++G   +VN M++ +SV+ R++   + +SF EF Y + Q YD
Sbjct: 129 LVNNYDWMKNFSLIDFARDVGKHITVNYMMAKDSVKKRVQGEGEGMSFTEFTYQLFQGYD 188

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +V L ++  C+LQ+GGSDQWGNI  G +L  R    K +ALT+PL+T A GTK GKT SG
Sbjct: 189 YVHLYEHMGCKLQIGGSDQWGNITTGTELVRRKLGGKAYALTTPLVTKADGTKFGKTESG 248

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+ + TS Y F+Q+W N  D D V++ K  T L     + + +           +K 
Sbjct: 249 NIWLDTDKTSVYKFFQFWINATDEDAVNWIKIFTFLDQQTCESLIEEHAKDPGYRVLQKR 308

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS---------------IHSQHMPTISISKDEV 346
           +A E+T MVHGRE  E A  A+   F  +                  + +P   ++KD +
Sbjct: 309 LAEEVTVMVHGREAYEVALKASQILFSKTVTPEQWSEFNQETLLDIFEGVPQAEVAKDAL 368

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+  +TL+     F  S +E RR LK N++ IN + I N +  I   D  +   + L 
Sbjct: 369 KDGVDPVTLMADLTSFLPSNSEVRRALKENSLSINKNKI-NAETVITTDDLIADNMLLLQ 427

Query: 406 FGKKNHIICHL 416
            GK+N+ +  +
Sbjct: 428 RGKRNYFLVLV 438


>gi|212715753|ref|ZP_03323881.1| hypothetical protein BIFCAT_00653 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661120|gb|EEB21695.1| hypothetical protein BIFCAT_00653 [Bifidobacterium catenulatum DSM
           16992]
          Length = 435

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 134/422 (31%), Positives = 214/422 (50%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SVLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E++K      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWAERLKAQIGGILEVE-GSNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWTASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQGNDFLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+W
Sbjct: 192 LFDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D+++ +  K  T LP  EI+R            EA++ +A 
Sbjct: 252 LDGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKVEIERLVEESKTNPGAREAQRTLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-----------DEVSRGMGLL 353
           E+T++VHG E   +A  AA   F        +   ++              + + G  + 
Sbjct: 312 EVTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDDEFAKAAVGDRVA 371

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF       +  GKK   +
Sbjct: 372 EAGMKAGLFKSISEARKTIKAGGVYLNNTRVEDEEQILNENDFLHGRFALIRRGKKALGV 431

Query: 414 CH 415
             
Sbjct: 432 VE 433


>gi|116670073|ref|YP_831006.1| tyrosyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116610182|gb|ABK02906.1| tyrosyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 437

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 224/420 (53%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L+ RG +H  ++  EL+ L +   +T Y G+D TA SLH G+L QL+L+  LQ  
Sbjct: 18  NIWQELNWRGLVHVSTDEVELEKLLAGDPITYYCGFDPTAPSLHLGNLVQLLLMRRLQLA 77

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDP      R +     + E +  ++     F+ +  G   A M+
Sbjct: 78  GHKPLGLVGGSTGLIGDPRP-TAERTLNTKDTVSEWVGYLQAQVRRFLSFD-GDNAARMV 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LREIG  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ  D+++
Sbjct: 136 NNLDWTAPLSAIDFLREIGKHFRVGTMLRKDAVASRLSSDEGISYTEFSYQILQGMDYLQ 195

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++Y C L+ GGSDQWGN+  G +L  +++   + AL +PL+T + GTK GK+   AIW
Sbjct: 196 LFRDYGCVLETGGSDQWGNLTSGTELIRKVEGKHVHALGTPLITNSDGTKFGKSEGNAIW 255

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ EM SPY F+Q+W N  DADV +  K  T L  +EI+   ++  +     E ++ +A 
Sbjct: 256 LDPEMCSPYAFYQFWLNTADADVAARLKVFTFLTRAEIEALEVSIAERPFAREGQRRLAF 315

Query: 305 EITTMVHGREEAEKAATAAMECFDMS------IHSQHMPTISISKDEVS-RGMGLLTLIV 357
           E+T++VHG E  EK   A+   F           +    T  +    V   G G++ L+V
Sbjct: 316 EVTSLVHGVEATEKVIAASAALFGGGDLAALDEQTLSAATAELPSVRVDPDGTGIVDLLV 375

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A S + ARR +      +NN+ +++    I   +      + L  GKKN     + 
Sbjct: 376 ASGLADSKSAARRTVGEGGAYVNNTKVTDPDAVIPGSELLHGRYLLLRRGKKNLATVEVA 435


>gi|240170136|ref|ZP_04748795.1| tyrosyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 425

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 146/425 (34%), Positives = 228/425 (53%), Gaps = 16/425 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG I Q ++   L     +G +T Y G+D TA+SLHAGHL  L+ L   Q+ G
Sbjct: 2   ILDELAWRGLIAQSTDLDALAAELRRGPMTLYAGFDPTAASLHAGHLVPLLTLRRFQRAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKTDAL 124
           H+PI L GG T +IGDP      R +     + E  E+I+G    F+ +   G   T A+
Sbjct: 62  HRPIVLAGGATGMIGDPRDVG-ERTLNDVDTVAEWTERIRGQLERFVDFSDSGDSPTGAI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W  ++  I+ LR++G  FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA D+
Sbjct: 121 VENNIEWTSAMSAIEFLRDVGKHFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SG 243
           VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   G
Sbjct: 180 VELHRRHGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           ++WL+ ++TSPY ++QY+ N  DADV+ + +  T L   E+  + +   +  +   A++ 
Sbjct: 240 SLWLDPQLTSPYAWYQYFVNTSDADVIRYLRWFTFLSAEELAELEQATAERPQQRAAQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           +A E+T++VHG         A+            D    +  +   ++++ +     G++
Sbjct: 300 LAAELTSLVHGEAATAAVEHASRALFGHAELSRLDEPTLAAALRETTVAELKPGSPDGIV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V  G A S   ARR +    + +NN  +  ++   +  DF     + L  GK+N   
Sbjct: 360 DLLVATGLADSRKAARRTINEGGVSVNNIRVETDEWTPQGMDFLHGRWLVLRRGKRNVAG 419

Query: 414 CHLCG 418
               G
Sbjct: 420 VERVG 424


>gi|219685485|ref|ZP_03540303.1| tyrosine--tRNA ligase [Borrelia garinii Far04]
 gi|219673041|gb|EED30062.1| tyrosine--tRNA ligase [Borrelia garinii Far04]
          Length = 405

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 158/412 (38%), Positives = 242/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALNLLYKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       ++    + + 
Sbjct: 61  EHGHMPIILIGDSTAKIGDPSGKSEMRKILSSEEINNNALSIKNQLQRITRF----SSSC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNI+ G+DL  R    + F +T PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIVSGVDLIRRKMRVEAFGVTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA KA  A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKAQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLINLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + N+   I  +DF +   I+L  GKK  +   L
Sbjct: 355 KSEGRRLINSGGVYINGKRVENQNHCITREDF-NNNEIELRVGKKKFLRIVL 405


>gi|165881913|gb|ABY71220.1| tyrosyl-tRNA synthetase [Lactobacillus brevis]
          Length = 418

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 140/420 (33%), Positives = 219/420 (52%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q ++   L  L S+  ++ Y G D T  S+H GHL   M++   +  
Sbjct: 2   NIIDELTWRGAINQQTDAEGLKKLTSEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFELA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R++    ++Q N++ +            G ++  M+
Sbjct: 62  GHHPYILIGGATGSIGDPSGRKTERQLQTMDKVQHNVKALSRQMQRLF---GGDSNVTMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSRISLLDFLRDYGKLVNINTMLAKDIVASRL--DTGISFTEFTYQILQSVDFLT 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L  +++ +LQ+GG+DQWGNI  GIDL  ++K     ++ LT PL+  A GTK GKT  GA
Sbjct: 177 LHNDHNIQLQIGGADQWGNITAGIDLIHKIKGADEAVYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N DD DV+ + K  T L   EI++         E   A++ +
Sbjct: 237 IWLDADKTSPYEFYQFWLNQDDRDVIRYLKFFTFLGQDEINQLAATVEDEPEKRLAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E  E A   +   F   I    +  +  + ++V      S    ++ L+
Sbjct: 297 AEEVTRFVHGEEALESAQHISEILFSGDIQRLTLTEVQEAFEKVPNVSINSEPTNIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +     S  +AR  + + AI IN    ++   Q+  +   S   + +  GKKN+ +  +
Sbjct: 357 TETAIEPSRRQAREDITNGAITINGERCTDTDAQLNPKTNFSGKFMVIRRGKKNYFLAKV 416


>gi|118464949|ref|YP_882266.1| tyrosyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118166236|gb|ABK67133.1| tyrosyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 421

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 146/423 (34%), Positives = 222/423 (52%), Gaps = 15/423 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  L  RG I Q ++   L        +T Y G+D TA SLHAGHL  L+ L   
Sbjct: 1   MSSGILDELGWRGLIAQSTDLDAL--AAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP      R +  +  + E  E+I+G    F+ +    T A
Sbjct: 59  QRAGHRPIVLAGGATGMIGDPRDVG-ERTLNEADTVAEWTERIRGQLERFVDFDESATGA 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   +  I+ LR++G  FSVN ML  ++VR RL+ +  +S+ EF+YM+LQA D
Sbjct: 118 VVVNNLDWTRQLSAIEFLRDLGKHFSVNVMLDRDTVRRRLEGD-GISYTEFSYMLLQAND 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           +VEL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   
Sbjct: 177 YVELHRRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGG 236

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G++WL+  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +  +   A++
Sbjct: 237 GSLWLDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQR 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGL 352
            +A E+T +VHG    E    A+   F             +  +   S+++ +     G+
Sbjct: 297 RLARELTVLVHGEAATEAVEHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGI 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+   
Sbjct: 357 VDLLVASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRTIA 416

Query: 413 ICH 415
              
Sbjct: 417 GVE 419


>gi|262403909|ref|ZP_06080466.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349871|gb|EEY99007.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 426

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 151/421 (35%), Positives = 220/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +          + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENLAPLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSSAEIEGIRQADALRTGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            ++T  VHG E    A       F   +    +  +S      +     SR   LL L++
Sbjct: 305 EQVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELSQLELDGLPCVAASRSDTLLDLLI 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLD 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|212550781|ref|YP_002309098.1| tyrosyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549019|dbj|BAG83687.1| tyrosyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 434

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 144/436 (33%), Positives = 230/436 (52%), Gaps = 25/436 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP    +F+  L  RG IH I+   E      + +  AY+G D TA SLH GHL  +M+L
Sbjct: 1   MPI---NFIEELRWRGMIHNITPGTE--EQLEKEMTVAYMGIDPTADSLHVGHLVGVMML 55

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH PI L+GG T +IGDPS + + R ++  + +++N   I+   +  + + +  
Sbjct: 56  KHFQQAGHCPIVLIGGATGMIGDPSMKSQERNLLNEETLRKNQNGIRIQLAKLLDFDSNI 115

Query: 121 TD-ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYM 177
           ++ A+++NN  W+    +++ +R+IG + +VN M+S +SVR RL    +  +SF EF+Y 
Sbjct: 116 SNIAILVNNYDWIRDYSFLNFIRDIGKYITVNYMMSKDSVRKRLAADAKVGMSFTEFSYQ 175

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           + Q YD++ L +NY+CRLQMGG+DQWGNI  GI+L  +    K+FALT PL+T   G+K 
Sbjct: 176 LFQGYDYLFLYENYNCRLQMGGADQWGNITTGIELIRKKVGGKVFALTCPLITKTDGSKF 235

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
           GKT +G IWL+K  TSPY F+Q+W N+ D D   + +  T L   EI+ +         +
Sbjct: 236 GKTEAGNIWLDKRYTSPYKFYQFWLNVSDIDAEKYIRIFTVLSKKEIENLISKHKLAPHL 295

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISI 341
              ++ +A E+T MVH +E+ E A   +   F                      +P   I
Sbjct: 296 RSLQRSLAKEVTIMVHSQEDYEMAVKTSTILFGNATSSFLKQLDKDTLENIFVGIPQFEI 355

Query: 342 SKDEVSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            K+ +S G+  + L+V      +S  E R+ +++  + IN   +      I         
Sbjct: 356 FKESLSLGIKAVDLLVDNIHIFSSRGEMRKLVQNGGVSINKEKLPIFDHLIDCSYLLRGR 415

Query: 401 NIKLSFGKKNHIICHL 416
            I +  GKKN  +  +
Sbjct: 416 YILVQKGKKNCFLLKV 431


>gi|323699292|ref|ZP_08111204.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459224|gb|EGB15089.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 426

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 152/425 (35%), Positives = 230/425 (54%), Gaps = 18/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I+Q+S+  ++    S+   T Y G+D TA SLH G+L  L+ L  +++ 
Sbjct: 2   NIYDELKWRGLINQVSDEDKVRAYLSEPGATMYCGFDPTAESLHVGNLVPLLCLVRMKRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ LMGG T  IGDPS +D+ R +  + ++ E +E IK     F++  TG     ++
Sbjct: 62  GHHPLYLMGGATGRIGDPSGKDKERELSDADKLDERLEMIKHQVRRFVERNTG-ERPNIV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W   +  I+LLR++G  F++N ML  ESV+ R+ + E  +S+ EF+YMILQAYDF 
Sbjct: 121 NNYDWTKDMSCIELLRDVGKHFTINWMLQKESVKGRIGREETGISYTEFSYMILQAYDFY 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPKLFALTSPLLTTASGTKMGKT 240
            L KNYDCRLQ+GG DQWGNI  G +   R       + + FALT PL+TTASG K GK+
Sbjct: 181 HLYKNYDCRLQIGGGDQWGNITAGCEFIRRRYAVDGESAEAFALTFPLITTASGKKFGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEA 298
              A++LN ++T+PY F+Q++ N DDADV+ F K  T L   +I  + K   +   +  A
Sbjct: 241 EGNAVYLNADLTTPYAFYQFFINTDDADVIKFLKLFTFLTPEQIAELEKQTEEAPHLRAA 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------- 350
           +K +A E+TTM+HG+ E E+   A    F         P    +  E +  +        
Sbjct: 301 QKRLAEEVTTMIHGKHELERVLAATEALFGKGDIKAIDPGTLRAAFESAPAVRYAPGDVP 360

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L  ++V  G   S  + R+ +    + IN   + +   +I    F     + +  GKKN
Sbjct: 361 DLPQMLVDLGLVKSKGQGRKDILGGGVYINGERVEDGD-EITDTQFIGGELLIIRKGKKN 419

Query: 411 HIICH 415
           + +  
Sbjct: 420 YGLVT 424


>gi|225352193|ref|ZP_03743216.1| hypothetical protein BIFPSEUDO_03809 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157440|gb|EEG70779.1| hypothetical protein BIFPSEUDO_03809 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 435

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 134/422 (31%), Positives = 216/422 (51%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SVLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E++K      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWAERLKAQIGGILEVE-GSNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W+ S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWIASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQGNDFLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+W
Sbjct: 192 LFDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D+++ +  K  T LP +EI+R            EA++ +A 
Sbjct: 252 LDGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKAEIERLVEESKTNPGAREAQRTLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-----------DEVSRGMGLL 353
           E+T++VHG E   +A  AA   F        +   ++              + + G  + 
Sbjct: 312 EVTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDGEFAKAAVGDRVA 371

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF       +  GKK   +
Sbjct: 372 EAGMKAGLFKSISEARKTIKAGGVYLNNARVKDEEQVLNENDFLHGRFALIRRGKKALGV 431

Query: 414 CH 415
             
Sbjct: 432 VE 433


>gi|89095105|ref|ZP_01168031.1| tyrosyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89080600|gb|EAR59846.1| tyrosyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 432

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 231/429 (53%), Gaps = 20/429 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
                L  L  RG + Q+++  EL+   ++G VT Y G+D TA SLH G L  L+ L   
Sbjct: 1   MSETLLQDLKARGLVAQMTSEEELEKHLAEGSVTLYCGFDPTADSLHIGSLVPLLTLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GHKP++L+GG T +IGDPSF+ + R++     +   +EK+K   S+F+ + +G   A
Sbjct: 61  QEFGHKPLALVGGATGLIGDPSFKAQERKLNDDSTVAGWVEKLKAQVSAFVDFESGANSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAY 182
            ++NN  W  ++  +  LR+IG  FSVN+M++ ESV+ R+ RE + +SF EF YMILQ+Y
Sbjct: 121 EVVNNLDWTQNVDILSFLRDIGKHFSVNQMIAKESVKQRIDREGEGISFTEFTYMILQSY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF +L  +++C LQ+GGSDQWGNI  G +L  R+   ++F LT PL+T + GTK GKT S
Sbjct: 181 DFQQLNASHNCTLQIGGSDQWGNITGGTELTRRMNGNQVFGLTLPLITKSDGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G IWL+   TSPY F+Q+W    DADV  F K  T L +SEID       + +   EA++
Sbjct: 241 GTIWLDANKTSPYAFYQFWLQTADADVYRFLKYFTFLSVSEIDALEKEDAERQGRPEAQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRG 349
           ++A E+T +VHG E    A       F                   +P+  +    V+  
Sbjct: 301 VLAEEVTHLVHGEEGLAAAKRITEALFSGDTSNLSEQDYAQLAQDGLPSSELDVSAVAE- 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI-----ISNEKLQIKLQDFDSTGNIKL 404
             L T++  AG A S  + +  L+ NA+ +N        I N                 +
Sbjct: 360 QPLTTILSDAGMAPSGKQVKDALQRNAVIVNGKAHGLDDIMNATGVFSKDAALFERYFLV 419

Query: 405 SFGKKNHII 413
             GKK H +
Sbjct: 420 KLGKKKHHL 428


>gi|297198738|ref|ZP_06916135.1| tyrosyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197715380|gb|EDY59414.1| tyrosyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 422

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 130/421 (30%), Positives = 210/421 (49%), Gaps = 11/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L  RG     ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ
Sbjct: 1   MTDIVDELKWRGLWALSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +P++L+GG T  IGDP      R +   + +   + +++     F+ +  G+  A+
Sbjct: 61  QAGLRPLALVGGATGQIGDPRP-TAERTLNDPETVANWVTRLRAQIEPFLSFE-GENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN+  G+DL  R      +  L +PL+  A GTK GKT  G
Sbjct: 179 LELYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDASVHCLATPLMVKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKII 302
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+        +   + + +    A +  
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEKQTEERPQARAAQRA 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSRGMGLLTL 355
             E  T +    +   A  AA            +           +   +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASRALFGQGELAELDERTLTAALSEVPHIQVAELGAVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 L 416
           +
Sbjct: 419 V 419


>gi|254775534|ref|ZP_05217050.1| tyrosyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 421

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 146/423 (34%), Positives = 222/423 (52%), Gaps = 15/423 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  L  RG I Q ++   L        +T Y G+D TA SLHAGHL  L+ L   
Sbjct: 1   MSSGILDELGWRGLIAQSTDLDAL--AAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP      R +  +  + E  E+I+G    F+ +    T A
Sbjct: 59  QRAGHRPIVLAGGATGMIGDPRDVG-ERTLNEADTVAEWTERIRGQLERFVDFDESATGA 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   +  I+ LR++G  FSVN ML  ++VR RL+ +  +S+ EF+YM+LQA D
Sbjct: 118 VVVNNLDWTRRLSAIEFLRDLGKHFSVNVMLDRDTVRRRLEGD-GISYTEFSYMLLQAND 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           +VEL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   
Sbjct: 177 YVELHRRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGG 236

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G++WL+  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +  +   A++
Sbjct: 237 GSLWLDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQR 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGL 352
            +A E+T +VHG    E    A+   F             +  +   S+++ +     G+
Sbjct: 297 RLARELTVLVHGEAATEAVEHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGI 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+   
Sbjct: 357 VDLLVASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRTIA 416

Query: 413 ICH 415
              
Sbjct: 417 GVE 419


>gi|256027617|ref|ZP_05441451.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 402

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 165/390 (42%), Positives = 240/390 (61%), Gaps = 6/390 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q
Sbjct: 1   MANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +      A+
Sbjct: 61  QHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDD--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF
Sbjct: 119 LANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA
Sbjct: 177 YVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A 
Sbjct: 237 LWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      +
Sbjct: 297 EVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRKIIKT 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +E RR ++ N + +N+  I + K  +  +
Sbjct: 355 KSEGRRLIEQNGMSLNDEKIKDVKFTLNDK 384


>gi|104773441|ref|YP_618421.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123077353|sp|Q1GBW9|SYY_LACDA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|103422522|emb|CAI97096.1| Tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 421

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 148/429 (34%), Positives = 215/429 (50%), Gaps = 19/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M  F  D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+
Sbjct: 1   MANF--DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMI 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G
Sbjct: 59  LKRFQLAGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----G 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  +  +SF EF+Y IL
Sbjct: 115 TENFRIVNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRL--KNGISFTEFSYQIL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKM 237
           QA DF  L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK 
Sbjct: 173 QAIDFYILNRDHCVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKF 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID            
Sbjct: 233 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWK 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRG 349
            EA+K +A E+T  VHG E  ++A T     F  ++       + I      S +  +  
Sbjct: 293 REAQKRLAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEK 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V     +S  +AR  + + AI +N   I +   ++          + +  GKK
Sbjct: 353 KNLVDFLVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKK 412

Query: 410 NHIICHLCG 418
            + + H+ G
Sbjct: 413 KYTLVHIKG 421


>gi|332297576|ref|YP_004439498.1| Tyrosyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180679|gb|AEE16367.1| Tyrosyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 412

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 162/416 (38%), Positives = 246/416 (59%), Gaps = 13/416 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L ERGF  Q ++   L  L  +G VT Y+G D T  SLH GH+     L  L+
Sbjct: 1   MNAALETLKERGFFQQCTDIDGLSALMDKGPVTFYVGCDPTGPSLHVGHMVPFFALRHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I+L+GGGT+ IGDPS + E R+M+   +I +N++KI+   + FI +      A+
Sbjct: 61  DAGHVGIALVGGGTARIGDPSGKTEMRKMLTYDQIDDNVKKIEAQLNRFIGFDGIH--AM 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             NN+ WL  + YID LR+IGS FSVNRML+FES + R+  E  LSFLEFNY +LQ++DF
Sbjct: 119 SDNNKFWLADLNYIDFLRDIGSCFSVNRMLTFESYKKRM--ETGLSFLEFNYQLLQSFDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + ++  LQ+GG DQWGNI+ G+DL  R    ++F LT PL+T + G KMGKT  GA
Sbjct: 177 LKLHERHNACLQIGGDDQWGNIVAGVDLIRRKTGDEVFGLTFPLITRSDGKKMGKTEKGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  +T  ++F+QYWRN+ DADV  F    T L ++E+D    +   +IN+AK+ +A 
Sbjct: 237 LFLDPALTPIFDFFQYWRNVADADVRKFLLLFTFLSVAEVDA---IVSGDINKAKERLAW 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFAT 363
           E+T ++HG+ EA+ A   A   F        MPT ++     +  G+G++ L  ++  A 
Sbjct: 294 EVTAVIHGKAEADTALAGAKAAFGGGGDRASMPTATLPAALFAGEGIGVVDLFFESKLAA 353

Query: 364 STNEARRHLKSNAIKI---NN--SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + ++ARR ++     +   +   + + +   +I   DFD +G + L  GKK  I  
Sbjct: 354 TKSDARRLVQQGGAYMTGADGTETQLQDIAAKITAADFDGSGELILRAGKKKFIRV 409


>gi|306822645|ref|ZP_07456023.1| tyrosine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309800858|ref|ZP_07694990.1| tyrosine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304554190|gb|EFM42099.1| tyrosine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308222394|gb|EFO78674.1| tyrosine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 440

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 138/421 (32%), Positives = 215/421 (51%), Gaps = 20/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++   L    +   V+ Y G+D TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SVLDELEWRGLISQSTDRDRLAEALNGEPVSYYCGFDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E++K      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWAERLKKQIGGILETD-GDNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+W
Sbjct: 192 LFDEYHCILEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R            EA++ +A 
Sbjct: 252 LDATMLSPYKFYQFWFNRPDVEMESLLKAFTFLPKAEIERLVKESETNPGAREAQRTLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD----EVSRGMG--------- 351
           E+T++VHG E   +A  AA   F        +   ++       +V  G G         
Sbjct: 312 EVTSLVHGEEATNQAIEAAGALFGRGGDLSSIDEATLEAAIEGLKVEDGYGEKIFAPAAV 371

Query: 352 ---LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              +    +KAG   S +EAR+ +KS  + +NN  + +++  +  +DF       +  GK
Sbjct: 372 GDRVAEAGMKAGLFKSISEARKTIKSGGVYLNNVRVDDQEQTLGEEDFLHGRFALIRRGK 431

Query: 409 K 409
           K
Sbjct: 432 K 432


>gi|254231884|ref|ZP_04925211.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis C]
 gi|124600943|gb|EAY59953.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis C]
          Length = 497

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 145/418 (34%), Positives = 225/418 (53%), Gaps = 16/418 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L
Sbjct: 1   MSGM---ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+PI L GG T +IGDP      R +  +  + E  E+I+G    F+ +    
Sbjct: 58  RRFQRAGHRPIVLAGGATGMIGDPRDVG-ERSLNEADTVAEWTERIRGQLERFVDFDDSP 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL  E  +S+ EF+Y++LQ
Sbjct: 117 MGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQ 175

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+VEL + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK+
Sbjct: 176 ANDYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKS 235

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
              G++WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  + +   Q  +   
Sbjct: 236 TGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRA 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRG 349
           A++ +A+E+T +VHG         A+   F             +  +   ++++ +    
Sbjct: 296 AQRRLASELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSP 355

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G++ L+V +G + S   ARR +    + +NN  + NE+   +  DF     + L  G
Sbjct: 356 DGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRG 413


>gi|282852519|ref|ZP_06261861.1| tyrosine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282556261|gb|EFB61881.1| tyrosine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 420

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 217/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTTQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +   +    F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+  +      + +   K+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDNDFDGKYVIIRKSKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|41407494|ref|NP_960330.1| tyrosyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|81414375|sp|Q740F5|SYY_MYCPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|41395847|gb|AAS03713.1| TyrS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 421

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 146/423 (34%), Positives = 222/423 (52%), Gaps = 15/423 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  L  RG I Q ++   L        +T Y G+D TA SLHAGHL  L+ L   
Sbjct: 1   MSSGILDELGWRGLIAQSTDLDAL--AAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP      R +  +  + E  E+I+G    F+ +    T A
Sbjct: 59  QRAGHRPIVLAGGATGMIGDPRDVG-ERTLNEADTVAEWTERIRGQLERFVDFDESDTGA 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   +  I+ LR++G  FSVN ML  ++VR RL+ +  +S+ EF+YM+LQA D
Sbjct: 118 VVVNNLDWTRQLSAIEFLRDLGKHFSVNVMLDRDTVRRRLEGD-GISYTEFSYMLLQAND 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           +VEL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   
Sbjct: 177 YVELHRRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGG 236

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G++WL+  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +  +   A++
Sbjct: 237 GSLWLDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQR 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGL 352
            +A E+T +VHG    E    A+   F             +  +   S+++ +     G+
Sbjct: 297 RLARELTVLVHGEAATEAVKHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGI 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+   
Sbjct: 357 VDLLVASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRTIA 416

Query: 413 ICH 415
              
Sbjct: 417 GVE 419


>gi|227512091|ref|ZP_03942140.1| tyrosine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227525078|ref|ZP_03955127.1| tyrosine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227084743|gb|EEI20055.1| tyrosine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227087790|gb|EEI23102.1| tyrosine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 418

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 142/425 (33%), Positives = 217/425 (51%), Gaps = 24/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L  L ++  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILDDLKWRGAINQETDHDGLYDLVNKKSVGLYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT  IGDPS +   R +    ++  N E +                  ++
Sbjct: 62  GHHPVILIGGGTGSIGDPSGKKSERVLQTMDQVHHNQEALTHQMEKLFGQDGSFE---IV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F++N M+  E + SRL  E  +SF EF Y ILQ  DF+ 
Sbjct: 119 NNYDWLSKMSLLDFLRDYGKLFNINTMIRKEIIASRL--EAGISFTEFTYQILQGVDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D ++Q+GG+DQWGNI  GIDL  +++    + + +T PLL  A GTK GK+  G 
Sbjct: 177 LFRYNDVQVQLGGADQWGNITSGIDLIHKVEGSDAQAYGMTIPLLLKADGTKFGKSEGGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV + K  T L  +EID          E  EA++ +
Sbjct: 237 VWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDKTEIDDLEKKVQTHPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+T  VHG +  E A   +   F   +            ++MPT+++S    S  + +
Sbjct: 297 AQEVTKFVHGPKAVESAERISKALFSGEVADLTTTEIEQGFKNMPTVNVS----SEPLNI 352

Query: 353 LTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  +V A    +S  +AR  + + AI+IN + I +   +I   D      + +  GKK +
Sbjct: 353 VQWLVDATKIESSRRQAREDINNGAIRINGAKIQDTDFEINPSDKFDGKFVIVRRGKKRY 412

Query: 412 IICHL 416
            +  +
Sbjct: 413 FLARV 417


>gi|329944474|ref|ZP_08292639.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530239|gb|EGF57118.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 420

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 144/418 (34%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D L  L  RG I Q ++   L    + G VT Y G+D TA SLH GHL  + ++  LQ
Sbjct: 1   MTDILDELQWRGLIAQHTDIDALRAALTDGDVTFYCGFDPTAPSLHHGHLVAVKVMRHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GG T +IGDP  +   R +     +      ++    + + +  G   A 
Sbjct: 61  LAGHHPLALVGGATGLIGDPRAKG-ERSLNTKDVVAGWAVSLQEQLENLLDFS-GDNPAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W  ++  ID LR++G  F +  MLS + V  RL  ++ +S+ EF+Y +LQA D+
Sbjct: 119 IVNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASDEGISYTEFSYQVLQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C L++GG+DQWGN++ G+DL  R++   +  +T+PL+T A GTK GK+  GA
Sbjct: 179 LELYRRYGCTLEVGGNDQWGNLVGGMDLIHRVEGASVHVMTNPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           IWLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+  A  +  +  EA++++
Sbjct: 239 IWLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLETATAENPKAREAQRVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG------MGLLTL 355
           A E+TT VHG E   +A  A    +     +     TI  +  +++ G        ++ L
Sbjct: 299 AHEVTTWVHGAEATAQAEAATSALWGRGDLAGIDEATILAATADLAAGDVVVGETTIVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           ++ AG     N AR+ +      +NN  + +E   I  +   + G + +  G++N  I
Sbjct: 359 LISAGLERGRNAARKTIAGGGAYLNNVKVEDEATVISHEHMLAGGVVLVRKGRRNLAI 416


>gi|258646957|ref|ZP_05734426.1| tyrosine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260404396|gb|EEW97943.1| tyrosine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 417

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 143/417 (34%), Positives = 210/417 (50%), Gaps = 14/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  Q  ++ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAINQQTDAEGLYKLVDQKSISLYCGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT  IGDPS R   R +  +++++ N + +              T   M+
Sbjct: 62  GHHPVILIGGGTGAIGDPSGRTTERVLQTAEQVKHNADSLTAQMKKLFGEDGSFT---MM 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ + V SR+  E  +SF EF+Y ILQ+ D+  
Sbjct: 119 NNYDWLSKISLLDFLRDYGKLFNINTMLAKDVVASRM--ETGISFTEFSYQILQSIDYKM 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +    +LQ+GG+DQWGNI  GI+L  +  +T + F LT PL+  A GTK GKT  GA+
Sbjct: 177 LYEKCGVQLQIGGADQWGNITNGIELIRKTNETHEAFGLTIPLMLKADGTKFGKTAGGAV 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N DD DVV + K  T L   EID          E   A+K +A
Sbjct: 237 WLDPKKTSPYEFYQFWFNQDDRDVVKYLKYFTFLTKEEIDTLDKEVQAHPENRTAQKRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLIV 357
            E+T  VHG     +A       F   I       I  +      G      + ++  +V
Sbjct: 297 EEVTRFVHGEAGLAQALKVTAALFSGDIAELTGEEIEGAFRNTKGGEVAFAPVNIVDALV 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   S  +AR  + + A+++N   I + +  I      +   I +  GKKN+   
Sbjct: 357 EAGVEKSKRQAREDITNGAVRVNGMQIKDTEASISAHPNTNGRFIIIRKGKKNYFSI 413


>gi|54023959|ref|YP_118201.1| tyrosyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81375263|sp|Q5YYA4|SYY_NOCFA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|54015467|dbj|BAD56837.1| putative tyrosyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 429

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 225/422 (53%), Gaps = 17/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              D +  L+ RG I Q ++   L    + G +T Y G+D TA+SLHAGHL  L+ L   
Sbjct: 1   MSGDIIDELTWRGLIAQSTDLDALRAALAAGPLTLYAGFDPTAASLHAGHLVPLLALKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP      R M  S  + E   +I+     F+      T A
Sbjct: 61  QRAGHRPIVLAGGATGLIGDPRDVG-ERTMNSSDTVAEWARRIRSQLERFVDLDDSPTGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   +  +D LR+IG  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 120 VIVNNMDWTGPLSAVDFLRDIGKHFSVNVMLARDTVKRRLEGD-GMSYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-S 242
           +V+L +++ CRLQ+GGSDQWGNII G++L  RL    + ALT PL+T+A G K GK+   
Sbjct: 179 YVQLRRSFGCRLQVGGSDQWGNIIAGVELNRRLDGESVHALTVPLVTSADGKKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G++WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  + +   +     EA++
Sbjct: 239 GSLWLDPEMTSPYAWYQYFVNTADADVVRYLRWFTFLDREELAELERATAERPHAREAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI------------HSQHMPTISISKDEVSR 348
            +A E+TT+VHG +       A+   F                  +      +++     
Sbjct: 299 RLAAEMTTLVHGEQHTRAVQLASQALFGRGDLRELDEATLGAALREAAGEGEVARVTPGE 358

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V  G A S   ARR +      +NN  I++        D+     + +  GK
Sbjct: 359 PATIVDLLVATGLAESRGAARRTVNEGGAAVNNQKIADPDWTPADGDYLHGRWLVVRRGK 418

Query: 409 KN 410
           +N
Sbjct: 419 RN 420


>gi|294784436|ref|ZP_06749727.1| tyrosine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294488008|gb|EFG35363.1| tyrosine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 406

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 166/394 (42%), Positives = 241/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +    
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDIRTMMTVEMIDHNVECIKKQMQKFIDFSDD- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I++ K  +   
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDMKITDVKFTLNNN 388


>gi|150024271|ref|YP_001295097.1| tyrosine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
 gi|259516999|sp|A6GW04|SYY_FLAPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149770812|emb|CAL42277.1| Tyrosine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 431

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 154/433 (35%), Positives = 239/433 (55%), Gaps = 24/433 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + +  L  RG  H +    E     ++   TAYIG+D TA SLH G + Q++LL  L+
Sbjct: 1   MKNLVEELKWRGLFHDMMPGTE--EQLTKESTTAYIGFDPTADSLHIGSMVQIILLVHLK 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKPI+L+GG T +IGDPS + + R ++    + +N+  IK + SSF+ + T   +A 
Sbjct: 59  NFGHKPIALIGGATGMIGDPSGKSDERNLLDEATLNKNVAGIKAVLSSFLDFNTTNANAP 118

Query: 125 M-LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAY 182
           + +NN  W+    +ID  R+IG   +VN M+S +SV+ RL    + +SF EF Y ++Q Y
Sbjct: 119 ILVNNYDWMKDFSFIDFARDIGKRITVNYMMSKDSVKKRLGAEGEGMSFTEFTYQLIQGY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKT 240
           DF  L KN++C LQMGGSDQWGNI  G +L  R+     K +ALT+PL+T A G+K GK+
Sbjct: 179 DFQYLYKNHNCLLQMGGSDQWGNITTGTELVRRMGGEGAKAYALTTPLITKADGSKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
             G +WL  + TS Y F+Q+W N  D D   + K  T L  + ID + +       +   
Sbjct: 239 EGGNVWLTADKTSVYKFYQFWLNTSDDDAEKYIKIFTFLDKNTIDGLIEEHKTAPHLRVL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           ++ +  EIT +VHG+EE EKA  A+   F  S                   +P   ISK 
Sbjct: 299 QRKLTEEITILVHGKEELEKAIKASNILFGNSTSNDLKGLDAATFLEIFDGVPQAEISKT 358

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++ ++ + +GF  S  EARR L +N+I +N   ++ E+  +  +D  +   + 
Sbjct: 359 DIEAGINIVEVLNEKSGFLKSNGEARRALSANSIAVNKEKVT-EEFTLTTKDMINNQFVL 417

Query: 404 LSFGKKNHIICHL 416
           L  GKKN+ + ++
Sbjct: 418 LQSGKKNYFVLNV 430


>gi|326804012|ref|YP_004321830.1| tyrosine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650892|gb|AEA01075.1| tyrosine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 420

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 208/417 (49%), Gaps = 13/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L        ++ Y G D T  SLH GHL   ++L   Q  
Sbjct: 2   NIIVELEWRGAINQQTDEAGLKDYVENHSISLYCGVDPTGDSLHIGHLIPFIMLKRFQLQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R E R++   + + EN  K+                  ++
Sbjct: 62  GHRPVILIGGATGSIGDPSGRSEERQLQSMEVVNENARKLTAQMEKLF-LKDPNAQFRLV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 121 NNYAWTKDLSLLDFLRDYGKLFNINTMLAKDVVASRL--EHGISFTEFTYQILQSMDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D RLQ+GG+DQWGNI  G+DL  +++ P  K F LT PL+  A GTK GKT  GA
Sbjct: 179 LYREEDVRLQIGGADQWGNITSGLDLIRKVEGPEAKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N DDADVV + K  T L   EI              EA+K +
Sbjct: 239 VWLDPEKTSPYEFYQFWVNQDDADVVKYLKYFTFLSKEEIAELAEKVATEPHKREAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTLI 356
           A E+T  VHG E    A +     F   I +     I      +   +V      L   +
Sbjct: 299 AKEMTLFVHGEEGLADALSITEALFSGDIKNLSAKQIEQGFNNMPGAQVPRETANLAVWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           V  G  +S  ++R  +K+ AI IN   I +   +I   D      I +  GKK + +
Sbjct: 359 VDNGVESSRRQSREDIKNGAIYINGERIQDIDYEISPADAIEDKYIVVRRGKKKYFL 415


>gi|169629440|ref|YP_001703089.1| tyrosyl-tRNA synthetase (TyrS) [Mycobacterium abscessus ATCC 19977]
 gi|169241407|emb|CAM62435.1| Tyrosyl-tRNA synthetase (TyrS) [Mycobacterium abscessus]
          Length = 437

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 145/425 (34%), Positives = 226/425 (53%), Gaps = 18/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L+ RG I Q ++   L    ++G ++ Y G+D TA+SLHAGHL  L+ L   Q+
Sbjct: 13  SSILDELTWRGLIAQTTDRDALAADIAKGPISVYGGFDPTAASLHAGHLVPLLTLSRFQR 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP      R +  +  + E  ++I+G    F+++    T A++
Sbjct: 73  AGHRPIVLAGGATGLIGDPRD-TSERNLHGTDVVAEWADRIRGQLERFVEFNDTPTGAIV 131

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W   +  ++ LR++G  FSVN ML  +++R RL+ +  +S+ EF+YM+LQA D+V
Sbjct: 132 ANNLEWTGQLTALEFLRDLGKHFSVNVMLDRDTIRRRLEGD-GISYTEFSYMLLQANDYV 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGA 244
           +L + Y C LQ+GGSDQWGNI+ G+ L  +     + ALT PL+T A GTK GK+   G 
Sbjct: 191 QLHRKYGCSLQIGGSDQWGNIVAGVRLARQQDGASVHALTVPLVTAADGTKFGKSTGGGN 250

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADVV + +  T L   EI  +     +      A++ +
Sbjct: 251 LWLDPEMTSPYAWYQYFINTADADVVRYLRWFTFLSAEEIGELETATTERAHERAAQRRL 310

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------------M 350
           A E+TT+VHG         A+   F        +   +++      G             
Sbjct: 311 AAEVTTLVHGESATLAVEHASGALFGRGDL-DRLDEGTLTAALTEAGNGEPARIADGEPD 369

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L+V +G + S   ARR +K   + +NN+ +  E       D+ + G + L  GK+N
Sbjct: 370 TIVDLLVSSGLSESKGAARRTVKEGGVYVNNTRVDAEDWTPGDGDYLTGGWLVLRRGKRN 429

Query: 411 HIICH 415
                
Sbjct: 430 IAGVQ 434


>gi|300362494|ref|ZP_07058670.1| tyrosine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353485|gb|EFJ69357.1| tyrosine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 420

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 215/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++ + N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQGKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +   +    F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +  I        S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVSQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    ++         + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDVDFIVEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|297181019|gb|ADI17220.1| tyrosyl-tRNA synthetase [uncultured delta proteobacterium
           HF0070_10I02]
          Length = 398

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 156/408 (38%), Positives = 241/408 (59%), Gaps = 14/408 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RGFI   ++   L+   + G +T Y+G+D T  SLH GHL  +M +  LQ+ 
Sbjct: 2   NAIDTLTARGFIKTHTDLDALNEAMAAGPITFYVGFDPTGDSLHIGHLLPVMAMAHLQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI ++GGGT+++GDPS +D++R ++  ++I+ N+E ++  F  F++         ++
Sbjct: 62  GHKPIVVLGGGTAMVGDPSGKDKTREILTPEKIRSNLEAMRVQFGRFLEL----ERCEVV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  + YI  LR++G  FSVN+M+S E +R RL+R Q LSF+EFNY +LQ+YDF+ 
Sbjct: 118 DNAEWLMGLGYIHFLRDVGKHFSVNKMMSAEGIRQRLERNQGLSFIEFNYHLLQSYDFLV 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C LQ+GG DQW NI+ G++L  R +     ALT PLL TA G KMGKT  GA W
Sbjct: 178 LHDKYGCTLQLGGDDQWFNILGGVELIRRERQQSAHALTIPLLQTADGKKMGKTEKGATW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+    SPY+++QYW N+ DADV  F +  T +P+ EI ++  L+G +I +AK+++A E 
Sbjct: 238 LDPNQCSPYDYFQYWVNVHDADVGRFLRLYTFMPLDEIAKLEALEGAQIRDAKQVLAFEA 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T + HG+EEAEKA  AA   F   +      +  +    V   + +L  +V  G   S  
Sbjct: 298 TALAHGKEEAEKARAAAQAAFSGGV------SADMPSHAVGFPVNILDALVATGLCKSKG 351

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +ARR ++  A+++     ++   Q+   + +      L  GKKN    
Sbjct: 352 DARRQIQQGAVRLG----ADRDQQVIDTNHNLDAETVLWKGKKNCFRL 395


>gi|315037444|ref|YP_004031012.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325955902|ref|YP_004286512.1| tyrosyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312275577|gb|ADQ58217.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325332467|gb|ADZ06375.1| tyrosyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327182737|gb|AEA31184.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 420

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERVLQTADQVKHNEESLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N  WL  +  ID LR+ G +F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRDNAEWLGKLNLIDFLRDYGKYFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K    +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKEDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F   I +  +P I        S +  S    L+
Sbjct: 297 KKLAEEVTKFVHGEAGLKEAQMITDALFSGDIKNLSVPQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|241888646|ref|ZP_04775953.1| tyrosyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864669|gb|EER69044.1| tyrosyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 417

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 132/420 (31%), Positives = 225/420 (53%), Gaps = 14/420 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S  L  L  R  ++Q ++   +  L  +  V+ Y G D T +SLH GHL   + L   Q
Sbjct: 1   MSKLLEDLKYRDLVYQQTDEEGIKELLEKESVSIYCGTDPTGNSLHIGHLLPFLTLKRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP+ L+GGGT IIGDPS R E R++   + I++N  +++    +  +   G  +  
Sbjct: 61  QHGHKPVILVGGGTGIIGDPSGRSEERQLQSLEVIEDNARRLEAQLRNIFR---GDDNIE 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  WL  +  I+ LR+ G   ++N +L+ +SV SRL  +  LSF EF+Y ILQ  D+
Sbjct: 118 FVNNIDWLGKLSMIEFLRDYGKLVNINYLLAKDSVASRL--DNGLSFTEFSYTILQGIDY 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSG 243
             L ++++ +LQ+GGSDQWGNI  G+++  +L+   + +  T PL+  + GTK GK+  G
Sbjct: 176 AYLNEHHNVKLQIGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N  D +VV   K+ T L   +I+  R +  +   +  A+K 
Sbjct: 236 AVWLDPEQTTPYEFYQFWFNTADTEVVPALKKFTFLEKEQIEALRESSEKEPHLRLAQKA 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTL 355
           +A E+  +VHG +  E A       F  +I       +      + K E+  +   ++  
Sbjct: 296 LAEEMVKIVHGEKALESALNITKALFSGNIKELTHDELKAAVKGMPKSELEKKEYNIVDF 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V++    S  +AR  + + A+ +N   +++ +  ++ +D    G   L  GKK +++  
Sbjct: 356 LVESNLVQSKRQAREDVNNGAVYVNGDKVTDLEYVVEGKDRLEDGFTVLRRGKKKYLLVE 415


>gi|262091744|gb|ACY25333.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 425

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 146/427 (34%), Positives = 229/427 (53%), Gaps = 11/427 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  D +   + RG IH  ++  +L    +   ++AY+G+D T+ SLH G+L   + L
Sbjct: 1   MAQF-GDVVLEFASRGLIHDSTDRADLTKRSTTSQMSAYVGFDPTSDSLHVGNLLGQISL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P+ L GG T ++GDPS R E R ++ +  +  N+  IKG     + + +G 
Sbjct: 60  RRFQMLGHRPVVLAGGATGMVGDPSGRSEERNLLDADSLAHNVSCIKGQLERILDFDSGA 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++++N TW   +  +D LR++G + +VN+M++ +SV+SR+     LSF EF+YM+LQ
Sbjct: 120 NKAVLVDNATWTKDVPVLDFLRDVGKYITVNQMMAKDSVKSRISDGNGLSFTEFSYMLLQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF  L ++ DC +QMGGSDQWGNI  GIDL  +      F LT PL+T + GTK GKT
Sbjct: 180 ANDFRHLCEHLDCEMQMGGSDQWGNITAGIDLIRKRLGRDSFGLTWPLVTKSDGTKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             GA+WL+ + TSPY F Q+W  + D D+     + +  PM EI      +    E   A
Sbjct: 240 ADGAVWLDAKRTSPYQFRQFWMQVTDIDIERMLPQFSLRPMEEIASILNEQRLSPEKRVA 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------G 351
           ++ +A EIT+M+HG E A  A  AA   F  +       T+ +   EV+           
Sbjct: 300 QRTLANEITSMLHGEESANAAEQAADVLFGANPVFASEATLKLIAQEVAVTQMGTAVLHD 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            + ++V  G A+S +EARR L+  +++ N   + +E  ++          + L  GK  +
Sbjct: 360 AVGVLVTTGLASSNSEARRLLQQRSVRANGEQL-DEHAKLDKVALLHGRWMLLRKGKTAY 418

Query: 412 IICHLCG 418
            +    G
Sbjct: 419 HLLDFAG 425


>gi|323465746|gb|ADX69433.1| Tyrosine-tRNA ligase [Lactobacillus helveticus H10]
          Length = 420

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|224534271|ref|ZP_03674849.1| tyrosine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514373|gb|EEF84689.1| tyrosine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 405

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 159/412 (38%), Positives = 240/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L++L +RGF+ Q ++ R L  L  +  V  Y G D T++SLH GHL   + +  L+
Sbjct: 1   MNPALNLLHKRGFLKQCTSLRVLSDLMDREKVVFYAGVDATSNSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    +   
Sbjct: 61  QHGHIPIVLIGDSTTKIGDPSGKSEMRKILSSEEISNNAFSIKNQLQRITKF----SSTC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNI+ GIDL +R    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIVSGIDLIKRKAGVEAFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   +I+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDKIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F       ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGKGDRSNIPFFKFSFSSLEEVVLLIDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + N    +  +DF +   I+L  GKKN +   L
Sbjct: 355 KSEGRRLINSGGVYINGKRVENPSHCLTREDF-NNNEIELRVGKKNFLRIVL 405


>gi|119953162|ref|YP_945371.1| tyrosyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254783575|sp|A1QZF9|SYY_BORT9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119861933|gb|AAX17701.1| tyrosyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 406

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 164/413 (39%), Positives = 254/413 (61%), Gaps = 8/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L IL +RGF+ Q +N   L  L  +  V  Y+G D T++SLH GHL   M++  LQ
Sbjct: 1   MNLALEILEKRGFLKQCTNLEALSTLMDKERVVFYVGVDATSTSLHIGHLIPFMVMAHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GGGT+ IGDPS +D  R+++  ++I++N++ I+      I +  G     
Sbjct: 61  RQGHIPIALVGGGTTKIGDPSGKDAMRKILSKEDIEKNVKAIRAQLLRIIDFSHGY---- 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  WL +I YI+ LR+IG  FSVNRML FE+ + R+  +  LSF+EFNY +LQ+YDF
Sbjct: 117 ILDNSAWLDNINYIEFLRDIGVCFSVNRMLGFETYKRRI--KDGLSFIEFNYQLLQSYDF 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +C+LQ+GG DQWGNI+ G+DL ++    ++F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCKLQIGGDDQWGNIVSGVDLIKKKLGTEVFGLTLPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+ E+ S Y+F+QY+RN+ D DV +F    T L   EI+ M+ ++G  +N+AK+ +A 
Sbjct: 235 VYLDAELYSVYDFYQYFRNVPDLDVKNFLYLFTFLGDDEIEHMSSVKGYLLNKAKETLAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           EIT +VHG + A KA++AA   F  S      +P   ++ D +   + L+ L+V +   +
Sbjct: 295 EITKIVHGEDAALKASSAARAAFKGSEGDRADIPFFKLALDSLEGSILLIDLMVLSKVVS 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR + S  + I+   I ++   +   +F   G I+L  GKK  +   L
Sbjct: 355 SKSEARRLINSGGVYIDKVRIGDQDYCLNKDNFI-NGEIELKIGKKRILRVIL 406


>gi|121728594|ref|ZP_01681615.1| tyrosyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673691|ref|YP_001215991.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|121629150|gb|EAX61593.1| tyrosyl-tRNA synthetase [Vibrio cholerae V52]
 gi|146315574|gb|ABQ20113.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012318|gb|ACP08528.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 434

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 220/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMVSQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL  ++
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDSLLDFLL 372

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 373 SSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 430

Query: 418 G 418
           G
Sbjct: 431 G 431


>gi|262167141|ref|ZP_06034855.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262024441|gb|EEY43128.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 426

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 220/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMVSQSENCASLMTV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL  ++
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDSLLDFLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 SSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|171742786|ref|ZP_02918593.1| hypothetical protein BIFDEN_01900 [Bifidobacterium dentium ATCC
           27678]
 gi|283456163|ref|YP_003360727.1| tyrosyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171278400|gb|EDT46061.1| hypothetical protein BIFDEN_01900 [Bifidobacterium dentium ATCC
           27678]
 gi|283102797|gb|ADB09903.1| tyrS Tyrosyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 440

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 213/421 (50%), Gaps = 20/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++   L    +   V+ Y G+D TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SVLDELEWRGLISQSTDRDRLAEALNGEPVSYYCGFDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E++K      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNPKDVVAGWAERLKKQIGGILETD-GDNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+W
Sbjct: 192 LFDEYHCVLEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R            EA++ +A 
Sbjct: 252 LDATMLSPYKFYQFWFNRPDVEMESLLKAFTFLPKTEIERLVKESETNPGAREAQRTLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE----------------VSR 348
           E+T++VHG E   +A  AA   F        +   ++                     + 
Sbjct: 312 EVTSLVHGEEATNQAIEAAGALFGRGGDLSSIDEATLEAAIEGLKVEDGHGEKIFAPAAV 371

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  +    +KAG   S +EAR+ +KS  + +NN  + +++  +  +DF       +  GK
Sbjct: 372 GDRVAEAGMKAGLFKSISEARKTIKSGGVYLNNVRVDDQEQTLGEEDFLHGRFALIRRGK 431

Query: 409 K 409
           K
Sbjct: 432 K 432


>gi|262191076|ref|ZP_06049283.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262033052|gb|EEY51583.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 426

 Score =  344 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 218/421 (51%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +      + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENCALLMTV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNRELGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL  ++
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDSLLDFLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|326796181|ref|YP_004314001.1| tyrosyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546945|gb|ADZ92165.1| Tyrosyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 434

 Score =  344 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 158/435 (36%), Positives = 227/435 (52%), Gaps = 20/435 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +D L+ L  RG I Q++   EL      G  T Y G+D TA SLH GHL  L++L
Sbjct: 1   MTVGINDLLADLQARGLIAQMTAEEELRAHLETGSRTLYCGFDPTADSLHLGHLVPLLVL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH PI+L+GG T +IGDPSF+   R++  +  +   ++KI+G  S F+++    
Sbjct: 61  KRFQDAGHNPIALVGGATGLIGDPSFKAAERQLNTADVVAGWVDKIRGQVSQFVQFDEVT 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A ++NN  W   +  +D LREIG  FSVN M++ ESV+ R  +    +SF EF+Y +L
Sbjct: 121 NPARVVNNLDWAGEMNVLDFLREIGKHFSVNAMINKESVQQRLNREGAGISFTEFSYALL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  DF EL + Y C LQ+GGSDQWGNI+ GIDL  R    ++F LT PL+T + GTK GK
Sbjct: 181 QGMDFAELNRAYGCTLQIGGSDQWGNIVGGIDLSRRQNQSQVFGLTVPLVTKSDGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T SGA+WL+ + TS Y F+Q+W N  DADV  F K  T L M EID    A  +     +
Sbjct: 241 TESGAVWLDPKKTSQYAFYQFWMNTADADVYKFLKYFTFLTMEEIDAIEQADKESTGKPQ 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            + I+A E T +VHG E    A       F                   +P+ S+ +  +
Sbjct: 301 GQSILAREATKLVHGEEGLAAAERITQALFSGKADQLSEQDLEQIKLDGLPSSSLVEANL 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI--ISN---EKLQIKLQDFDSTGN 401
           +    L +L+ +AG A S  + +  L+ N++ +N     I++           +      
Sbjct: 361 AE-TPLTSLLAEAGLAASGKQVKDALQRNSVFVNGVAKGIADNMSASDIFAADNGYYGKY 419

Query: 402 IKLSFGKKNHIICHL 416
             +  GKK H +  L
Sbjct: 420 FLVKLGKKKHHLFTL 434


>gi|331701032|ref|YP_004397991.1| Tyrosyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128375|gb|AEB72928.1| Tyrosyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 418

 Score =  344 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 145/425 (34%), Positives = 216/425 (50%), Gaps = 24/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L+ L +Q  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILEDLKWRGAINQETDHEGLNELVNQKSVGIYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+G GT  IGDPS +   R +    +I+ N   +                  ++
Sbjct: 62  GHHPVILIGSGTGSIGDPSGKKSERVLQSMDKIKRNEIALTAQMEKLFGED---GKFEIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN +WL  +  +D LR+ G  F+VN ML+ E V SRL  E  +SF EF Y ILQA DF+ 
Sbjct: 119 NNYSWLSKLSLLDFLRDYGKLFNVNTMLNKEIVASRL--EVGISFTEFTYQILQAIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GG+DQWGNI  GIDL  ++     K F LT PLL  + GTK GK+  G 
Sbjct: 177 LYRHNDVQLQLGGADQWGNITSGIDLIHKIEGPDAKAFGLTIPLLLKSDGTKFGKSEGGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N DD DV+ + K  T L   EI           E  EA++ +
Sbjct: 237 VWLDPKKTSPYEFYQFWINQDDNDVIKYLKYFTFLSQDEIADLEKKVQTQPEKREAQRKL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+T  VHG+E  ++A       F  ++            ++MP++ +S    S  + +
Sbjct: 297 AEEVTEFVHGKEAVKQAEHITAALFSGNVADLTTTEIEQGFKNMPSVEVS----SEPLNI 352

Query: 353 LTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  +V A     S  +AR  + + AI+IN   I +   +I          + +  GKK +
Sbjct: 353 VQWLVDATKIEKSRRQAREDITNGAIRINGERIEDVNYEINPAKKFDGKFVIVRRGKKKY 412

Query: 412 IICHL 416
            +  +
Sbjct: 413 FLARV 417


>gi|323343530|ref|ZP_08083757.1| tyrosine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095349|gb|EFZ37923.1| tyrosine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 433

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 141/436 (32%), Positives = 221/436 (50%), Gaps = 27/436 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG + Q+    E      +G+ +AY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MTKNFVEELKWRGMLAQMMPGTE--EFLQKGMASAYLGTDPTADSLHIGHLCGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q+ GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ +   G   
Sbjct: 59  QRCGHKPFILVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKAQVAKFLDFEAEGDNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A M+NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AEMVNNYDWIKEFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+ L + Y  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K G
Sbjct: 179 GYDFLYLYRKYGVKLQLGGNDQWGNMTTGTELIHRTLGNDTEAYCLTCPLITKADGKKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           KT SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID +     ++    
Sbjct: 239 KTESGNIWLDRNRTTPYKFYQFWLNVSDDDAEKYIKIFTSLEKEVIDALIVEHRQDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISIS 342
             +K +A E+T MVH +E+ + A  A+   F  S                   +P   I 
Sbjct: 299 VLQKRLAEEVTAMVHSKEDLDMAVEASNILFGKSTKESLLKLDEATLLDIFDGVPHYIIE 358

Query: 343 KDEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           ++++  G   + +    G     S ++ R+ +K   + +N   ++     I   D     
Sbjct: 359 REQL--GQQAVDIFTLEGMDIFQSKSDMRKLVKGGGVSVNKEKLTAFDSTISDADLIDGK 416

Query: 401 NIKLSFGKKNHIICHL 416
            I +  GKKN+ +  +
Sbjct: 417 YILVQKGKKNYFLITV 432


>gi|260774198|ref|ZP_05883113.1| tyrosyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611159|gb|EEX36363.1| tyrosyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 420

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 223/418 (53%), Gaps = 13/418 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL  L++RG + Q +   EL  L +    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FLHELAQRGLMAQSTPIDELSELLN-RPQTLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I+L+GG T +IGDPSF+   R +  S  +Q+ +  +       +     +   L +N
Sbjct: 65  HTAIALIGGATGMIGDPSFKAAERTLNPSTTVQQWVNDLAQQIDQVMTPHMTQ-PLLCVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R+IG  FSVN M++ ESV+ R  + +Q +SF EF+Y +LQ++DF  
Sbjct: 124 NADWITKINVIDFFRDIGKHFSVNTMINRESVKQRLSRPDQGISFTEFSYSLLQSFDFAH 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT SGAIW
Sbjct: 184 LNQQYQCRLQIGGNDQWGNIVSGIDLTRRLNNQVVHGLTLPLITKSDGTKFGKTESGAIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L +S+I+ + +         +A++++A 
Sbjct: 244 LDSNKTSPYAFYQFWLNTDDADVYRFLRYYTFLSLSDIETIEQQDKASTGKPQAQQVLAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK 358
           ++T  VHG E    A       F   ++   +  +       +   +      L+ L++ 
Sbjct: 304 QLTRFVHGEEGLLSAQRITQALFRGEMNQLSLAELQQLELDGLPCYQTDNTDSLIELMLV 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              A+S  +AR  L + AI+IN   +  E  Q+  Q         +  GKK   +  L
Sbjct: 364 TQLASSKRQAREWLANGAIRINGERVEQE--QLSSQFALFDRYYVIQRGKKQFALAKL 419


>gi|320527328|ref|ZP_08028513.1| tyrosyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132352|gb|EFW24897.1| tyrosyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 415

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 136/417 (32%), Positives = 225/417 (53%), Gaps = 14/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +   ++   L     +   T Y G+D TA SLH GHL Q++LL   Q  
Sbjct: 2   NFIEELQWRGLVKDCTDKEGLGEQL-KNPTTIYCGFDPTADSLHVGHLQQILLLRRYQLQ 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GG T +IGDP      R+++  +E+  N E I+   + F+ +  G   A+M 
Sbjct: 61  GHQPIALCGGFTGMIGDPRP-TTERKLLTHEEVLHNAECIREQLAKFLSFE-GSNAAIME 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+++ ML  ++++ RL  +  +S+ EF+Y ILQ+ D+  
Sbjct: 119 NNNNWLGEMHLLDFLRDYGKLFNISYMLQKDTIKKRL--DSGISYTEFSYTILQSIDWYN 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K Y+C++Q+GGSDQWGN+  G++L  ++     K+F +TSPL+T + G+K GK+    
Sbjct: 177 LFKKYNCQIQIGGSDQWGNLTSGMELIRKMEGDNAKVFGITSPLITKSDGSKFGKSEGKN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+   T+ Y F+Q+W N  DAD+V + KRL+     EI    +      E  E +K +
Sbjct: 237 IWLDPARTNAYEFYQFWLNTPDADIVDYLKRLSFHTPEEIMGYEESLKNAPEKREGQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-----ISISKDEVSRGMGLLTLIV 357
           A E+T +VHG++  +KA       F   I +              K  V  G+ L+  +V
Sbjct: 297 AAELTELVHGKDGLKKALRITETFFKGDIMTLSPEEMKEGLADAKKAAVEDGVTLIDALV 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A    S +EAR+ ++  ++ +N + +++ +  +   +  +     L  GKKN+ + 
Sbjct: 357 TAEVCKSKSEARKLIEQGSVSVNGNKVTDIQAVLHQSEAINQEFSILKKGKKNYFVL 413


>gi|330827948|ref|YP_004390900.1| Tyrosyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328803085|gb|AEB48284.1| Tyrosyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 421

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 145/417 (34%), Positives = 221/417 (52%), Gaps = 12/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ERG + Q S+   L    +    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LLDELTERGLVAQNSDTAALADHLAT-PRTVYCGFDPTAGSLHIGHLVPLLMLRRFQLAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +  +  +Q  +  +     + +    G +   ++N
Sbjct: 65  HTPVALVGGATGLIGDPSFKATERSLNSTDTVQGWVASLSAQIRALLPADEGLSAPQLVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVE 186
           N  W+  +  +D LR+IG  FSVN ML+ ESVR RL + +Q +SF EF+Y +LQ+YDF  
Sbjct: 125 NGDWMGQMSALDFLRDIGKHFSVNAMLARESVRQRLARPDQGISFTEFSYALLQSYDFAV 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   C LQ+GG+DQWGNI  G+DL  RL   ++  +T PL+T A GTK GKT  GA+W
Sbjct: 185 LHQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVHGMTLPLITKADGTKFGKTEGGAVW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+  +TSPY F+Q+W    D DV  F +  + + +SEID       + +   +A++++A 
Sbjct: 245 LDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMSLSEIDALEAEDAKRQGRKQAQQVLAN 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T +VHG+         +   F   +          +    +    VS    L++L+V 
Sbjct: 305 ELTELVHGKAALAAVQRISELLFSGDVARLGESDLAQLAQDGMPCSTVSGETDLVSLLVS 364

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            G A S   AR  L + AI +N  +  ++  Q+   D      + L  GKK + +  
Sbjct: 365 CGLANSRRIARELLAAGAISLNGVLKQDD--QLSATDRLFGRYLLLRRGKKQYHLVE 419


>gi|254291176|ref|ZP_04961972.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422870|gb|EDN14821.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 434

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 219/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGTEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+    A        +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADTLRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL  ++
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDFLL 372

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E +              L  GKK   +  L 
Sbjct: 373 SSGLASSKRQAREWLENGAIRVNGERVQQEGML--SGFALFDRYYVLQRGKKQFALIKLE 430

Query: 418 G 418
           G
Sbjct: 431 G 431


>gi|302848016|ref|XP_002955541.1| hypothetical protein VOLCADRAFT_83275 [Volvox carteri f.
           nagariensis]
 gi|300259164|gb|EFJ43394.1| hypothetical protein VOLCADRAFT_83275 [Volvox carteri f.
           nagariensis]
          Length = 520

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 144/435 (33%), Positives = 231/435 (53%), Gaps = 22/435 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + + +++L  RG + +++   EL+     ++G ++ Y G+D TA SLH G+L  +++L W
Sbjct: 84  RPNVVALLRSRGLVQEVTGGEELEAAAGGAEGPLSVYCGFDPTADSLHLGNLLGIVVLSW 143

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG--TGK 120
            Q+ GH+P++L+GG T  +GDPS R   R ++  ++I+ N+  I+ +    +      G 
Sbjct: 144 FQRCGHQPVALLGGATGRVGDPSGRSTERPVLSEEQIEHNVAAIRSLLQDILTRNSPPGA 203

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +LNN  W   + ++  LREIG F  V  M++ +SVR+R++ EQ +SF EF Y +LQ
Sbjct: 204 PAVRVLNNLDWFGPMSFLTFLREIGKFARVGAMMAKDSVRTRMESEQGISFTEFTYQLLQ 263

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK------LFALTSPLLTTASG 234
            YDFV L + ++ R+Q+GGSDQWGNI  G DL  +L   +       + LT PLL  + G
Sbjct: 264 GYDFVHLCREHNVRVQIGGSDQWGNITAGTDLVRKLLGGEDREAPACYGLTFPLLVDSEG 323

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQ 291
            K GK++ GAIWL+ E  SPY F+QY   + DADV+   K LT LP+ EID         
Sbjct: 324 RKFGKSVGGAIWLSAEKLSPYKFYQYLFQVTDADVIKLLKMLTFLPLEEIDGLQAAMGAP 383

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS---- 347
           G   N A++ +A E+T  VHG E   +A  A       +       T+     +      
Sbjct: 384 GYVPNTAQRRLAEEVTRFVHGEEGLAQAIKATEALKPGAATQLDAATLETVAGDAPSATL 443

Query: 348 -----RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
                 G+ L  ++V      S + AR+ +K   + +NN+ +S E   +K  D      +
Sbjct: 444 TRGSVEGVPLADILVAVKLQPSKSAARKLIKGGGVYLNNAKVSEELYTVKPSDLIDGRLL 503

Query: 403 KLSFGKKNHIICHLC 417
            ++ GKKN ++  + 
Sbjct: 504 LIAAGKKNKMLVRVA 518


>gi|329768070|ref|ZP_08259580.1| tyrosyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328838338|gb|EGF87948.1| tyrosyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 417

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 133/424 (31%), Positives = 226/424 (53%), Gaps = 22/424 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S  L  L  R  ++Q ++   +  L  +  V+ Y G D T +SLH GHL   + L   Q
Sbjct: 1   MSKLLEDLKYRDLVYQQTDEEGIKELLEKESVSIYCGTDPTGNSLHIGHLLPFLTLKRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP+ L+GGGT IIGDPS R E R++   + I++N  +++G   +  +   G  +  
Sbjct: 61  QHGHKPVILVGGGTGIIGDPSGRSEERQLQSLEVIEDNASRLEGQLRNIFR---GDDNIE 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  WL  +  I+ LR+ G   ++N +L+ +S+ SRL  +  LSF EF+Y ILQ  D+
Sbjct: 118 FVNNRDWLGKLSMIEFLRDYGKLVNINYLLAKDSISSRL--DNGLSFTEFSYTILQGIDY 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSG 243
             L ++++ +LQ+GGSDQWGNI  G+++  +L+   + +  T PL+  + GTK GK+  G
Sbjct: 176 AYLNEHHNVKLQIGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N  D +VVS  K+ T L   +I+  R +  +   +  A+K 
Sbjct: 236 AVWLDPEQTTPYEFYQFWFNTADTEVVSALKKFTFLEKDQIEALRESSEKEPHLRLAQKA 295

Query: 302 IATEITTMVHGREEAEKAATAAM----------ECFDMSIHSQHMPTISISKDEVSRGMG 351
           +A E+  +VHG +  E A                  ++    + MP   + K E      
Sbjct: 296 LAEEMVKIVHGEKALESALNITKALFSGNIKELTHDELKEAVKGMPKSELEKKE----YN 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++  +V++    S  +AR  + + A+ +N   +++ +  ++ +D    G   L  GKK +
Sbjct: 352 IVDFLVESNLVQSKRQAREDVNNGAVYVNGDKVTDLEYVVEAKDRLEDGFTVLRRGKKKY 411

Query: 412 IICH 415
           ++  
Sbjct: 412 LLVE 415


>gi|262091699|gb|ACY25289.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 427

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 142/424 (33%), Positives = 229/424 (54%), Gaps = 17/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++  + RG IH  ++  EL    +   ++AY+G+D T+ SLH G+L   + L  LQ  
Sbjct: 9   DVVAEFAARGLIHDSTDREELSKRTTSSQISAYVGFDPTSDSLHVGNLLGQISLRRLQLL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T ++GDPS + E R ++ ++++  N++ IK      + +  G   AL++
Sbjct: 69  GHRPIVLAGGATGMVGDPSGKSEERNLLDAEQLAHNVQSIKRQLECILDFS-GPNAALLV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  + K +D LR++G   +VN+M++ +SV+SR+     LS+ EF+YM+LQA DF  
Sbjct: 128 DNADWTKNAKMLDFLRDVGKHITVNQMMAKDSVKSRISDGNGLSYTEFSYMLLQANDFRY 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +++ C +QMGGSDQWGNI  G DL  +      + LT PL+T A GTK GKT  GA+W
Sbjct: 188 LCEHHQCEMQMGGSDQWGNITAGTDLIRKTLGRSAYGLTWPLITKADGTKFGKTADGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TSPY F Q+W  I DAD+     + +   M+EI  +   Q +      A++ +A 
Sbjct: 248 LDARRTSPYQFRQFWMQIADADIEHMLPKFSLRSMNEIAEILADQKRTPESRVAQRTLAR 307

Query: 305 EITTMVHGREEA----------EKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           E+T M+HG E A            A   +     + + +  + + SI    +S  +G+  
Sbjct: 308 ELTVMLHGEEAADAAEQAADVLFGAHPVSASPAALHLIASEVASSSIGAAALSDAVGI-- 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V  G A+S +EARR L   +++ N   + +E  ++          + L  GK  + + 
Sbjct: 366 -LVTTGLASSNSEARRLLSQRSVRANGEQM-DEHAKLDKIPLLHGRWLLLRKGKTAYHLL 423

Query: 415 HLCG 418
            L G
Sbjct: 424 DLQG 427


>gi|126662992|ref|ZP_01733990.1| putative tyrosyl-tRNA synthetase 1 [Flavobacteria bacterium BAL38]
 gi|126624650|gb|EAZ95340.1| putative tyrosyl-tRNA synthetase 1 [Flavobacteria bacterium BAL38]
          Length = 435

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 153/437 (35%), Positives = 232/437 (53%), Gaps = 28/437 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + +  L  RG  H +    E      +   TAYIG+D TA SLH G L Q++LL  L+
Sbjct: 1   MKNLVEELRWRGLFHDMMPGTE--EQLLKEATTAYIGFDPTADSLHIGSLVQIILLMHLR 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K+GHK I+L+GG T +IGDPS +   R ++    +  N+E IK + S F+ +     +A 
Sbjct: 59  KSGHKAIALVGGATGMIGDPSGKSNERNLLDEATLNHNVEGIKSVLSRFLDFDAKDENAP 118

Query: 125 M-LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQ 180
           + +NN  W+    +ID  R+IG   +VN M+S +SV+ RL  E   + +SF EF Y ++Q
Sbjct: 119 ILVNNYDWMKDFSFIDFARDIGKRITVNYMMSKDSVKKRLSGEEGAEGMSFTEFTYQLIQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-----KLFALTSPLLTTASGT 235
            YDF  L K+Y+C LQMGGSDQWGNI  G +L  R+        K +ALT+PL+T A G+
Sbjct: 179 GYDFYHLNKHYNCLLQMGGSDQWGNITTGTELVRRMNVGNDDKSKAYALTTPLITKADGS 238

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGK 293
           K GK+  G +WL+ + TS Y F+Q+W N  D D   + K  T L    I+++     +  
Sbjct: 239 KFGKSEGGNVWLDADKTSVYKFYQFWLNATDVDAEKYIKIFTFLDKDTIEKLIAAHNEAP 298

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-------------IHSQHMPTIS 340
            +   +K +A EIT MVH   + E A  A+   F  S                + +P   
Sbjct: 299 HLRVLQKRLAEEITVMVHSAADLENAIAASNAFFSPSMDELKKLDEKTFLEVFEGVPQAE 358

Query: 341 ISKDEVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           IS ++++ G+ ++  +  K  F  S ++ARR LK N+I +N   +  E   I  +D  + 
Sbjct: 359 ISMEDLNAGLDMIAALAAKTNFLASNSDARRELKQNSISLNKEKV-GEDKIITKEDLINN 417

Query: 400 GNIKLSFGKKNHIICHL 416
             + L  GKKN+ +  +
Sbjct: 418 QFLLLQKGKKNYYVIKV 434


>gi|296393969|ref|YP_003658853.1| tyrosyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181116|gb|ADG98022.1| tyrosyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 428

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 145/430 (33%), Positives = 232/430 (53%), Gaps = 14/430 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +   L  L  RG I Q ++ + L    ++G VT Y G+D TA SLHAGHL  L+  
Sbjct: 1   MTVEQVAPLQELGWRGLIAQSTDEQALAGAFAKGPVTFYAGFDPTADSLHAGHLMLLLTA 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P+ L GG T +IGDP      R++     ++E +E++K   + F+++    
Sbjct: 61  RRLQRLGHRPVLLAGGATGLIGDPREVG-ERQLADEALVRERVERLKPQLTKFVEFDDSP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A++ NN  W   +  +D LR+IG  FSVN ML+ E++R RL  +  LS+ EF+Y++LQ
Sbjct: 120 TGAVLANNLDWTGQLSALDFLRDIGKHFSVNVMLARETIRKRLDGD-GLSYTEFSYLLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           + D+++L + +   LQ+GGSDQWGNI+ G +L  R+    + ALT+PL+T++ G K+GK+
Sbjct: 179 SNDYLQLHRKFGATLQLGGSDQWGNIVGGAELIRRIDGAHVHALTTPLVTSSDGVKLGKS 238

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
              G+IWL+ E TSPY ++QY+  + D+DV  + +  T L  +E +    A  Q      
Sbjct: 239 TGGGSIWLDPEKTSPYAWYQYFLAVQDSDVGKYLRWFTDLDQAEAEELDEATAQRPHQRL 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP--------TISISKDEVSRG 349
           A++ +A E+TT+VHG EE  +   A+   F         P           +++      
Sbjct: 299 AQRRLAQELTTIVHGAEELRRVEAASQALFGSGELKDLEPAALGQALAETPLAQVVPDGA 358

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V  G   S N ARR ++     +NN  +++ + Q    D+     + L  GK+
Sbjct: 359 TSIVDLLVATGLCESRNAARRTVQEGGAWVNNQRVADAEWQPCEDDWLHGRWLVLRRGKR 418

Query: 410 NHIIC-HLCG 418
           N      L G
Sbjct: 419 NFAGVSRLVG 428


>gi|172058244|ref|YP_001814704.1| tyrosyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990765|gb|ACB61687.1| tyrosyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 415

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 150/416 (36%), Positives = 224/416 (53%), Gaps = 13/416 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q+++   +  L S    T Y G+D TA SLH GHL  +++L   Q+ G
Sbjct: 3   LLEDLEFRGLISQMTDEEGIKELLSS-PTTLYTGFDPTADSLHIGHLLPILVLRRFQEAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+GG T +IGDPS R   R +  S  ++E   +IKG  S F+    G+    + N
Sbjct: 62  HHAIGLVGGATGMIGDPSGRSTERSLNTSDIVEEFANRIKGQLSRFLPLD-GENPVTIAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR+IG  F ++ ML+ +SV SRL  +  +SF EF+YM+LQ++DF++L
Sbjct: 121 NLDWTKDLTIIDFLRDIGKHFPISYMLAKDSVDSRL--QNGISFTEFSYMLLQSFDFLKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAIW 246
            +N  CRLQ+GGSDQWGNI  G++L  R+   +  F +T PL+T + G K GKT  GA+W
Sbjct: 179 YENEGCRLQVGGSDQWGNITAGMELIRRVGHDQKAFGITVPLVTKSDGQKFGKTAGGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + T+PY F+Q+W N+DD DV+ F K  T L   EI+  +       E   A++ +A 
Sbjct: 239 LDADKTTPYEFYQFWFNVDDLDVIKFLKYFTFLTPDEINALQQEVETAPEKRVAQRRLAE 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKA 359
           E+T +VHG E  E++       F   I S     I+     + +  +     L+ ++V+A
Sbjct: 299 EMTVLVHGAEALEQSERITKALFSGEIKSLKAEDIADAFKGMPRFTLGEATNLVDILVEA 358

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + S  +AR  + + AI IN         +I  QD        +  GKK + +  
Sbjct: 359 KISPSKRQAREDVTNGAIYINGDREQELTKEITKQDAI-GDFTIIRRGKKKYFVLE 413


>gi|159482042|ref|XP_001699082.1| hypothetical protein CHLREDRAFT_139405 [Chlamydomonas reinhardtii]
 gi|158273145|gb|EDO98937.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 492

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 146/434 (33%), Positives = 232/434 (53%), Gaps = 22/434 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + +S+L  RG I +++N  EL+   + G ++ Y G+D TA SLH G+L  +++L W Q
Sbjct: 59  RPNIVSLLRARGLIQEVTNTEELERAAAAGRLSVYCGFDPTADSLHLGNLLGIVVLAWFQ 118

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK--TD 122
           + GH+P++L+GG T  +GDPS R   R ++  ++I+ N+  I  +    +   +      
Sbjct: 119 RCGHEPVALLGGATGRVGDPSGRSTERPVLSEEQIEHNVTSIGNLLRGILVRNSPPDAPA 178

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +LNN  W  S+ ++  LRE+G F  V  M++ +SVR+R++ EQ +SF EF Y +LQ Y
Sbjct: 179 VRVLNNLDWFGSMGFLTFLREVGKFARVGTMMAKDSVRTRMESEQGISFTEFTYQLLQGY 238

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK------LFALTSPLLTTASGTK 236
           DFV L + +  R+Q+GGSDQWGNI  G DL  RL   +       + LT PLL  + G K
Sbjct: 239 DFVHLCREHGVRVQIGGSDQWGNITAGTDLIRRLLGGEDKEAPACYGLTFPLLVDSEGRK 298

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGK 293
            GK++ GAIWL  E  SPY F+QY   + DADVV   K LT LP   +  ++   +  G 
Sbjct: 299 FGKSVGGAIWLAAERLSPYKFYQYLFQVTDADVVKLLKMLTFLPLPEVEALEAAMRAPGY 358

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISK 343
             N A+K +A E+T  VHG E   +A  A                    +   P+ S+ +
Sbjct: 359 VPNTAQKRLAEEVTRFVHGEEGLAQALKATEALKPGAATQLDAATLEEVAGDAPSASLPR 418

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             V+ G  L  ++V      S + AR+ +K   + +NN+ +  E   ++ +D      + 
Sbjct: 419 ASVA-GAPLADVMVAIKLQPSKSAARKLIKGGGVYLNNAKVVEELYVVRPEDLIDGRLLL 477

Query: 404 LSFGKKNHIICHLC 417
           ++ GKKN ++  + 
Sbjct: 478 VAAGKKNKMLVRIV 491


>gi|158520626|ref|YP_001528496.1| tyrosyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|254783594|sp|A8ZUK6|SYY_DESOH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|158509452|gb|ABW66419.1| tyrosyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 433

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 179/431 (41%), Positives = 259/431 (60%), Gaps = 24/431 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             + ILSERGF+   ++ +EL  L ++  VT YIG+D TASSLH G L  +M L  +Q+ 
Sbjct: 2   SVVDILSERGFVEAFTHEQELRDLAAESAVTCYIGFDPTASSLHVGSLVPIMALAHMQRN 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT ++GDPS + E R+++  + ++ NIE I+   S FI +  G   AL++
Sbjct: 62  GHRPIALVGGGTGLVGDPSGKTEMRQLITPETVEANIEGIQRQLSRFIDFDGG--KALLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  ++YI  LR+IG  FSVNRM+  ES R RL+ E+ LSF+EFNYM+LQAYDF++
Sbjct: 120 NNADWLTGLEYIPFLRDIGRHFSVNRMIKAESYRMRLESEEGLSFIEFNYMLLQAYDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  + DC LQMGGSDQWGNI+ GIDL  R+   +++ LT PL+TT+SG KMGKT +GA+W
Sbjct: 180 LCGDRDCVLQMGGSDQWGNIVAGIDLVRRVLNRQVYGLTFPLITTSSGAKMGKTAAGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+++QYW N DD DV  F    T LPM EI  + ++ G ++N AK ++A E 
Sbjct: 240 LDAERTSPYDYYQYWINTDDQDVARFLSLFTFLPMPEIQEVKRISGADLNSAKAVLAFEA 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHM---------------------PTISISKDE 345
           T + HG + A +A + A   F      Q +                     P   ++  E
Sbjct: 300 TRIAHGTDAAVQAHSDAAVNFGRRDIPQDLLPSSTIPRDAEGTGAAVSGTAPQTEMTMAE 359

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           +S G+    L    G A S  +ARR ++     +N+  I +++ ++  +D D    I L 
Sbjct: 360 LSEGIPAFVLFHTVGLADSKGQARRLIQQGGGYVNDRRIESDEYRVSAEDLDDAK-IVLR 418

Query: 406 FGKKNHIICHL 416
            GKK +    +
Sbjct: 419 AGKKRYHTIVV 429


>gi|328464009|gb|EGF35505.1| tyrosyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 420

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ E V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKEVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSRKEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|51598626|ref|YP_072814.1| tyrosyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81610041|sp|Q661P9|SYY_BORGA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51573197|gb|AAU07222.1| tyrosyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 405

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 156/412 (37%), Positives = 240/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALNLLYKRGFLKQCTSLKVLSDLMDREKIVFYAGVDTTSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+ I  N   IK       ++    + + 
Sbjct: 61  QHGHMPIVLIGDSTTKIGDPSGKSEMRKILSSEVINNNALSIKNQLQKITRF----SSSC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +C+LQ+GG DQWGNI+ G+DL  R    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCKLQIGGDDQWGNIVSGVDLIRRKMGVEAFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIESISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEVEALKVQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLIDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + N+   I  +DF +   I+L  GKK  +   L
Sbjct: 355 KSEGRRLINSGGVYINGKRVENQNHCITREDF-NNNEIELRVGKKKFLRIVL 405


>gi|227894187|ref|ZP_04011992.1| tyrosyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227863992|gb|EEJ71413.1| tyrosyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 420

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAAQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  I  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKINLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KKLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVIQIEQGLKNAPSAEAGSERKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTV 419


>gi|145300655|ref|YP_001143496.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142853427|gb|ABO91748.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 433

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 149/426 (34%), Positives = 225/426 (52%), Gaps = 12/426 (2%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P      L  LS+RG + Q S+P  L    +    T Y G+D TA SLH GHL  L++L 
Sbjct: 11  PMINPHLLDELSQRGLVAQNSDPAALADHLATSR-TVYCGFDPTAGSLHIGHLVPLLMLR 69

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GH P++L+GG T +IGDPSF+   R +  +  +   +  +     + +    G +
Sbjct: 70  RFQLAGHTPVALVGGATGLIGDPSFKATERSLNSADTVLGWVASLSAQIRALLPADDGLS 129

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQ 180
              ++NN  W+  +  +D LR+IG  FSVN ML+ ESVR RL + +Q +SF EF+Y +LQ
Sbjct: 130 APQLVNNGDWMGQMSALDFLRDIGKHFSVNAMLARESVRQRLARPDQGISFTEFSYALLQ 189

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF  L +   C LQ+GG+DQWGNI  G+DL  RL   ++  +T PL+T A GTK GKT
Sbjct: 190 SYDFAVLHQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVHGMTLPLITKADGTKFGKT 249

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
             GA+WL+  +TSPY F+Q+W    D DV  F +  + + +SEID       Q +   +A
Sbjct: 250 EGGAVWLDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMSLSEIDALEEEDAQRQGRKQA 309

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGL 352
           ++++A E+T +VHG+         +   F   +          +    +    VS    L
Sbjct: 310 QQVLANELTELVHGKAALAAVQRISELLFSGDVVRLGESDLAQLAQDGMPSSTVSGETDL 369

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           ++L+V  G A S   AR  L + AI +N +I  +E  Q+  ++      + L  GKK + 
Sbjct: 370 VSLLVSCGLANSKRIARELLAAGAISLNGTIRQDE--QLSAEERLFDRYLLLRRGKKQYQ 427

Query: 413 ICHLCG 418
           +    G
Sbjct: 428 LVAWLG 433


>gi|58039808|ref|YP_191772.1| tyrosyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81351902|sp|Q5FR80|SYY_GLUOX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58002222|gb|AAW61116.1| Tyrosyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 416

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 192/417 (46%), Positives = 264/417 (63%), Gaps = 5/417 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS FL     RG I Q ++   LD     G +TAY+G+D TA SLH G+   +M L
Sbjct: 1   MP--KSPFLLEAQARGLIFQCTDLDALDEAMLAGPITAYVGFDPTADSLHVGNALTIMAL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--GT 118
             LQK GH+PI+LMGGGT+ IGDPSFRDE+R ++ ++ I  NI  I+     FI +    
Sbjct: 59  RLLQKHGHRPIALMGGGTAKIGDPSFRDEARSLITNETIAHNIAGIEKSLRQFITFSDED 118

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
             + A++ NN  WL  + YI+LL+++G  FSV+RML F+SVR RL+REQ L+FLEFNY I
Sbjct: 119 PSSGAILANNADWLDKLSYINLLQDVGVHFSVSRMLGFDSVRQRLEREQGLTFLEFNYSI 178

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+YDF EL + +   LQMGGSDQWGNI+ GIDL  R    ++F LT+PL+TT+SG KMG
Sbjct: 179 LQSYDFRELNRRHGAVLQMGGSDQWGNIVSGIDLTRRTDGKQIFGLTTPLVTTSSGAKMG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+  GA W+  E    + +WQ+WRN +DADV  F K  T LP+ E +R+  L+G EINEA
Sbjct: 239 KSAKGATWVRPEKLPVFEYWQFWRNTEDADVGRFLKFFTDLPVEECERLGALEGSEINEA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           KKI+ATE T + HGR  AE+AA  A   F+       +P I +  + ++ G+    +  +
Sbjct: 299 KKILATEATAICHGRGAAEEAAETARRVFEQGSAQAALPEIDLPANLIAEGLPAFRVFQE 358

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG A S  EARR ++    ++N+ ++S+E     L D    G +K+S+GKK HI+  
Sbjct: 359 AGLAASGGEARRLIRGGGGRVNDVVVSDENQTFTLDDL-RDGVLKVSYGKKKHILLR 414


>gi|317507360|ref|ZP_07965095.1| tyrosyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254308|gb|EFV13643.1| tyrosyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 468

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 147/413 (35%), Positives = 233/413 (56%), Gaps = 13/413 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG + Q ++ + L    ++G VT Y G+D TA SLHAGHL  L+    LQ+ GH
Sbjct: 45  LEELGWRGLVAQSTDEQALAEAFAKGPVTFYAGFDPTADSLHAGHLMLLLTARRLQRLGH 104

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ L GG T +IGDP      R++  ++ ++  +E++K     F+++    T A++ NN
Sbjct: 105 RPVMLAGGATGLIGDPRDVG-ERQLADAETVRARVERLKPQLMKFVEFDDSPTGAVLANN 163

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +  +D LR+IG  FSVN MLS E+++ RL  +  LS+ EF+Y++LQ+ D+++L 
Sbjct: 164 LDWTGELSALDFLRDIGKHFSVNVMLSRETIKKRLDGD-GLSYTEFSYLLLQSNDYLQLR 222

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-SGAIWL 247
           +     LQ+GGSDQWGNI+ G++L  R+    + ALT+PL+T+A GTK+GK+   G+IWL
Sbjct: 223 RRLGATLQLGGSDQWGNIVGGVELIRRVDGAHVHALTTPLVTSADGTKLGKSTGGGSIWL 282

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           + E TSPY ++QY+  + DADV  + +  T L   EI+    A  +      A++ +A E
Sbjct: 283 DPEKTSPYAWYQYFLAVQDADVGKYLRWFTDLSRPEIEELDQATAERPHQRLAQRRLAQE 342

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRG--MGLLTLIV 357
           +TT+VH  EE  +  +A+   F         PT         S  EV  G  +G++ L+V
Sbjct: 343 LTTLVHSAEELRRVESASQALFGAGKLEDLDPTALGQALAETSLAEVGPGGEVGIVDLLV 402

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             G   S N ARR ++     +NN  +++ + +    D+     + L  GK+N
Sbjct: 403 ATGLCESRNAARRAVQEGGAWVNNQRVADAEWEPSEDDWLHGRWLVLRRGKRN 455


>gi|31789473|gb|AAP58586.1| putative tyrosyl-tRNA synthetase [uncultured Acidobacteria
           bacterium]
          Length = 422

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 237/423 (56%), Gaps = 16/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D LS    RG ++  +    L    + G + AY G+D TA+SLH G L  ++ L  LQ+ 
Sbjct: 2   DALSEFEWRGTLYDGT--EGLREALASGPLRAYAGFDPTAASLHVGSLMPILGLARLQRL 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GGGT +IGDPS +   R++M S ++ E++  I+     F+ +G G   AL++
Sbjct: 60  GHTPIAVVGGGTGLIGDPSGKTLERQLMDSSKVDEHVAGIRRQLERFLDFGRGPASALLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+  I  +R++G  F+VN ML+ ESV+ R+ RE  +S+ EF+Y++LQAYD++ 
Sbjct: 120 DNAEWLTSLGAIAFMRDVGKHFTVNYMLAKESVKGRIDREDGISYTEFSYLLLQAYDYLV 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   + C LQ+GGSDQWGNI  GI+L  RL+  K   L  PL+TTA+GTK GKT +GAIW
Sbjct: 180 LHDRHGCALQIGGSDQWGNITAGIELIRRLRGAKAHGLVMPLVTTATGTKFGKTEAGAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+  +T PY F+Q+W N DD D V + K  T L  + +  +        E   A++ +A 
Sbjct: 240 LDPSLTKPYEFYQFWLNTDDRDAVRYLKFFTFLDAARVGELEASSLAEPEKRVAQRELAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ----------HMPTISISKDEVSRGMGLLT 354
           E+T +VHG +    A  A+ + F   +             ++P+ +++  +   G  L  
Sbjct: 300 EVTRLVHGSQAVLDAEAASEKLFRGDVTQMSVDELLQVFANVPSSTVAFSD--DGWALAD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+   G   S  EA+R +++  + +N   I  EK ++  +D        +  GKK++ + 
Sbjct: 358 LVTSVGVTKSKGEAQRLVRAGGLYVNERRIGEEKARLTAEDAIGGQVFVIRKGKKDNFLV 417

Query: 415 HLC 417
            + 
Sbjct: 418 RIS 420


>gi|313884403|ref|ZP_07818164.1| tyrosine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620187|gb|EFR31615.1| tyrosine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 420

 Score =  342 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 141/422 (33%), Positives = 210/422 (49%), Gaps = 21/422 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   L  L S+  +  Y G D T  S+H GHL   M+L   Q  G
Sbjct: 3   IIDELEWRGAINQQTDADGLKKLVSEKEIYLYCGVDPTGDSMHIGHLIPFMILKRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI ++GG T  IGDPS R   R +   + ++ N +K+K         G G  D  ++N
Sbjct: 63  HHPIVVIGGATGSIGDPSGRTSERTLQTMEVVENNADKLKAQMIHLFNKGQG-GDFEIVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  +D LR+ G  F++N ML+ + V SRL  +  +SF EF+Y ILQ+ DF  L
Sbjct: 122 NHDWLGKISLLDFLRDYGKHFNINTMLAKDIVASRL--DVGISFTEFSYQILQSIDFHHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
            K +  +LQ+GG DQWGNI  G+D   R++ P  + + LT PL+  + GTK GK+   AI
Sbjct: 180 YKEHQVQLQIGGGDQWGNITSGLDFIRRMEGPEAEAYGLTIPLMLKSDGTKFGKSAGNAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N  D DVV F K  T L   EID       +   +  A++ +A
Sbjct: 240 WLDPEKTTPYEFYQFWLNQQDTDVVKFLKYFTFLSKEEIDALAKEIEERPHLRVAQQRLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVSRGMGLL 353
            EIT  VHG+   ++A       F                ++MP  +  + + +  + L 
Sbjct: 300 EEITRFVHGQAALDEAQLITKALFTGDVAQLNEKQIRDGFKNMPQFTAPQTDNTLAIWLT 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +    G   S  +AR  + + AI +N   I++    I          + +  GKKN+ +
Sbjct: 360 DI----GLVDSRRQAREFVSNGAISLNGQKITDVDYPISSDLAIGGKYLIVRRGKKNYYL 415

Query: 414 CH 415
             
Sbjct: 416 VT 417


>gi|116252758|ref|YP_768596.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257406|emb|CAK08501.1| putative tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 421

 Score =  342 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 206/414 (49%), Positives = 278/414 (67%), Gaps = 2/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              +SDFL  LSERGF+HQ ++   LD     G  TAY G+DLTA SLH GHL  +M+L 
Sbjct: 8   TGPRSDFLRTLSERGFLHQCTDLGALDSWLCSGAGTAYNGFDLTADSLHVGHLIPIMMLR 67

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W QKTG+KPI+L+GG TS +GDPSFRD SR  +  ++I +N+  I+ +F  F+ +G G T
Sbjct: 68  WFQKTGNKPIALLGGATSRLGDPSFRDTSRPFLSEEQIMKNLIGIRRVFERFLAFGDGPT 127

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M+NN  WL  + Y+D LR+IG  FSVNRML+ ESVR RL+REQSLS LEFNYM++QA
Sbjct: 128 DAVMVNNADWLGGLNYLDFLRDIGPHFSVNRMLTSESVRQRLEREQSLSLLEFNYMVMQA 187

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF  LA++  C LQ+GGSDQWGNI+ G++ G R+    LF LT+PLLTT+SG KMGK++
Sbjct: 188 YDFHVLAESRGCLLQLGGSDQWGNIVSGVEFGRRIGGRTLFGLTAPLLTTSSGAKMGKSV 247

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           SGA+WLN +  SPY FWQ+WRN  DADV  F +  T LP+ EI R+  L+  EINEAKKI
Sbjct: 248 SGAVWLNADRLSPYEFWQFWRNTGDADVGRFLRLFTELPLDEIARLEVLRDSEINEAKKI 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A +IT + HG + A +A+  +   F+       +PT+ +  D +     L+  +V AG 
Sbjct: 308 LADQITRLCHGADAAVQASETSRRIFEAGEVPAGLPTVRLP-DSLRGDFPLVDAMVVAGL 366

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A S +EARR +    +++N   +S+E +Q+   D    G I+LS GKK HI+  
Sbjct: 367 AKSKSEARRLIGGGGVRVNGGSVSDEAMQLGDFD-VQDGVIRLSVGKKRHILLQ 419


>gi|305666159|ref|YP_003862446.1| tyrosyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707657|gb|EAQ99898.1| tyrosyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 418

 Score =  342 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 150/420 (35%), Positives = 225/420 (53%), Gaps = 23/420 (5%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
            +H      E       G+ +AY+G D TA SLH GHL  +M+L   Q  GHKP +L+GG
Sbjct: 1   MLHDAMPGTE--EHLMTGMQSAYVGIDPTADSLHIGHLVGVMMLRHFQLAGHKPYALLGG 58

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSI 135
            T +IGDPS + E R ++    ++ N E ++   S F+ +    +  A+++NN  W+   
Sbjct: 59  ATGMIGDPSGKSEERNLLDEATLRLNQEALRAQLSRFLDFDSEDENAAILVNNYDWMKDF 118

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            ++D +R+IG   +VN M++ +SV+ RL  + +  +SF EF Y ++Q YDF+ L +N +C
Sbjct: 119 SFLDFIRDIGKHITVNYMMAKDSVKKRLSAESKDGMSFTEFTYQLVQGYDFLHLYQNNNC 178

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT  G +WL+   TS
Sbjct: 179 TLQMGGSDQWGNITTGTELIRRIGGGKGYALTCPLITKADGTKFGKTEGGNVWLDAHRTS 238

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
           PY F+QYW N  D D   + K  T L   EID       +   +   +K +A EIT MVH
Sbjct: 239 PYKFYQYWLNTSDTDAEKYIKIFTFLTKEEIDGLISEHQESPHLRVLQKRLADEITVMVH 298

Query: 312 GREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEVSRGMGLLTLI- 356
            +E+ + A  A+   F  S                   +P  +ISK E+  G+ ++  + 
Sbjct: 299 SQEDLDNAKKASNILFGRSTSEDLKTLDEKTFLDVFDGVPQANISKSELESGLDMIGALA 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            K GF +S  EARR LK N+I +N   + +    I   D  +   + L  G++N+ +  +
Sbjct: 359 AKTGFLSSNGEARRELKQNSISVNKEKVKD-DYMITSTDLINDRFVLLQKGRRNYFVLVV 417


>gi|161506790|ref|YP_001576744.1| tyrosyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|189083657|sp|A8YX30|SYY_LACH4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160347779|gb|ABX26453.1| Tyrosyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 420

 Score =  342 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ E V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKEVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K    L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFAFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|159037519|ref|YP_001536772.1| tyrosyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157916354|gb|ABV97781.1| tyrosyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 428

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 137/417 (32%), Positives = 211/417 (50%), Gaps = 12/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I   +   EL  L     +T Y+G+D TA SLH G+L Q++    LQ  G
Sbjct: 14  LFDDLRWRGLIQDSTGLDELRALLDGPGMTFYVGFDPTAPSLHVGNLMQVVTARRLQLAG 73

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GG T  IGDP      R +   + +   + +I+   + F+ Y  G   A ++N
Sbjct: 74  HRPLLLVGGATGQIGDPKE-SAERVLNPPEVVAGWLARIRDQLAPFVSY-QGANAARLVN 131

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ++ LR++G  F VNRML+ E +R+RL  E  +SF EF+Y +LQA DF EL
Sbjct: 132 NLDWTGEMSVVEFLRDVGKHFPVNRMLAREVIRARL--ESGVSFTEFSYQLLQANDFFEL 189

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T + G K GKT   AIWL
Sbjct: 190 HRRHGCRLQFGGSDQWGNITAGVDYTRRRGAGPVEAFTTPLVTRSDGMKFGKTEGEAIWL 249

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           + E+TSPY F+Q+W N DD DV  + +  +    +E++       +      A++ +A E
Sbjct: 250 DSELTSPYAFYQFWVNADDRDVARYLRYFSFRSRAELEALEKEAAERPAARVAQRALAEE 309

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLIVKA 359
           +TT+VHG  E  +   A+   F      +  P +            +     ++ L+ ++
Sbjct: 310 LTTLVHGEREMAQVVAASQALFGRGSLGELSPAVLRAALTEAGLVHLDELPDVVGLLKES 369

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G   S  EARR +      +NN+ + + +  +   D      + L  GK++     L
Sbjct: 370 GLVPSNKEARRVIAEGGAYLNNNRVMSAEAVVAPDDLLHGRYLVLRRGKRSFAGIEL 426


>gi|320528949|ref|ZP_08030041.1| tyrosyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138579|gb|EFW30469.1| tyrosyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 402

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 178/399 (44%), Positives = 249/399 (62%), Gaps = 10/399 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + + IL ERGF+ Q ++   L  L ++G VT YIG+D TA SLHAGH   LM +  LQ
Sbjct: 1   MQNAIDILKERGFLAQCTDEEALRKLMAEGPVTFYIGFDPTADSLHAGHFIALMAMSHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI L+GGGT  +GDPS R + R++M  + I+ N E  K   + FI +      A+
Sbjct: 61  KAGHRPICLVGGGTGTVGDPSGRTDMRKVMTDETIRHNCECFKKQIARFIDFTED--RAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL S+ YI+LLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF
Sbjct: 119 MVDNGDWLRSLNYIELLRDVGAHFTVNRMLAAESYKQRW--EKGLTFLEFNYMIMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGG DQW NII G++L  R  +  +F LT+ LLT + GTKMGKT  GA
Sbjct: 177 LELNRRYGCRLQMGGDDQWSNIIAGVELCRRKSSKTVFGLTNKLLTKSDGTKMGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY+F+QYWRNIDDADV +    LT LPM E+ R++  +G EIN +K+I+A 
Sbjct: 237 LWLDAEKTSPYDFYQYWRNIDDADVETCLSLLTYLPMDEVRRLSAAEGAEINRSKEILAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T +VHG E A +A + A   F             + K   + G  L+ ++ + G   S
Sbjct: 297 EATKIVHGAEAAAQARSTAQALFSGGAAED------VPKVVCAAGEKLVDVLTRGGVFAS 350

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             EARR ++   + +N+  +S+E   +   DF +     
Sbjct: 351 KGEARRLIQQGGVTLNDLRVSDEHYVLGDADFSNGEAFL 389


>gi|330814306|ref|YP_004358545.1| tyrosyl-tRNA synthetase cluster 1 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487401|gb|AEA81806.1| tyrosyl-tRNA synthetase cluster 1 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 412

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 181/414 (43%), Positives = 273/414 (65%), Gaps = 2/414 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
                L+    RG+  Q +N   L+ L     ++ YIG+D TASSLH G L Q+M L   
Sbjct: 1   MNKKLLTEFKNRGYFFQCTNENYLEKLLESKKISFYIGFDCTASSLHVGSLIQIMCLRLF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+GGGT+++GDPS ++ESR+++  ++I++NI++IKGIFS F+         
Sbjct: 61  QKFGHKPIVLLGGGTTMVGDPSGKEESRKILTEEQIEKNIQQIKGIFSKFLDRE-NMEKV 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           + +NN+ WL  + YID LR  G  F++NRML+F+SV++RL+REQSLSFLEFNYMILQAYD
Sbjct: 120 VYVNNKKWLTKLNYIDFLRTYGKHFTLNRMLTFDSVKTRLEREQSLSFLEFNYMILQAYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++EL KN DC LQ+GGSDQWGNI+ G+DL  +    +   LT+PL+TTA G KMGKT  G
Sbjct: 180 YLELFKNNDCLLQIGGSDQWGNIVNGVDLIRKEIQGEAMGLTTPLITTAQGKKMGKTEDG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN+++ S Y++WQ+WRN DD DV+ +    T L +  I    +  G ++N  K ++A
Sbjct: 240 AVWLNEDLVSTYDYWQFWRNTDDRDVIRYLYLFTELEVETIKSYEQYTGNQLNGLKILLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E TT++HG++ A++A   +   F+     + +P+  I K E+ +G+ L  ++++  F++
Sbjct: 300 NEATTLLHGKKAAQEAEETSRSTFEERSTGKDLPSKKIKKSEIEKGIALKDVLLEIQFSS 359

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S  + +R++ + A +INN I +NE+ +I L D      IK+SFGKK H + ++ 
Sbjct: 360 SGGDFKRNMVNGAYRINNIIETNEEKKITLTDVV-NKQIKISFGKKKHFVINVI 412


>gi|227510794|ref|ZP_03940843.1| tyrosine-tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189733|gb|EEI69800.1| tyrosine-tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 420

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 134/423 (31%), Positives = 214/423 (50%), Gaps = 15/423 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + +  L  RG ++Q ++   L  L     ++ Y G D T  S+H GHL   M++   
Sbjct: 1   MVMNIIDELKWRGAVNQQTDAEGLKNLTEHNSISLYCGVDPTGDSMHIGHLIPFMMMKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +  GH P  L+GG T  IGDPS R   R++   +++Q N++ +            G ++ 
Sbjct: 61  ELAGHHPYILIGGATGSIGDPSGRKSERQLQTMEKVQHNVDALTRQMKRLF---GGDSNI 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN  WL  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ D
Sbjct: 118 TFVNNYDWLSKISLLDFLRDYGKLVNINTMLAKDIVASRL--DVGISFTEFTYQILQSVD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F+ L   Y+ +LQ+GG+DQWGNI  GID+  ++K P  +++ LT PL+  A GTK GKT 
Sbjct: 176 FLTLYSKYNVQLQIGGADQWGNITAGIDMIHKIKGPETQVYGLTIPLMLKADGTKFGKTA 235

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
            GAIWL+ + TSPY F+Q+W N DD DVV + K  T L   EI     +  +  E   A+
Sbjct: 236 GGAIWLDPKKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQDEISELAKSVKEHPEERLAQ 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVS-RGMGLL 353
           + +A E+T  VHG+E    +   +   F   I   ++  +          E+      ++
Sbjct: 296 RRLAEEVTRFVHGQEALTTSEKISDILFSGDITKLNVAEVQDAFGKAPSVEIKSDPKNIV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V      S  +AR  + + AI +N S + + +  +   +      + +  GKK + +
Sbjct: 356 DLLVDTEIEPSKRQAREDVTNGAITVNGSKVEDTEHIVDPTNHFEGKFVIVRRGKKTYFL 415

Query: 414 CHL 416
             +
Sbjct: 416 ARV 418


>gi|15594715|ref|NP_212504.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi B31]
 gi|216264532|ref|ZP_03436524.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218249813|ref|YP_002374887.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321685|ref|ZP_03797211.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|6226205|sp|O51343|SYY_BORBU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783571|sp|B7J1U2|SYY_BORBZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2688267|gb|AAC66744.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi B31]
 gi|215981005|gb|EEC21812.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218165001|gb|ACK75062.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226232874|gb|EEH31627.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 405

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 155/412 (37%), Positives = 240/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKK  +   +
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRIVI 405


>gi|225453040|ref|XP_002265238.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 483

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 153/434 (35%), Positives = 237/434 (54%), Gaps = 19/434 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 52  IPLHRSNVIEILEQRGLVDSITSP-ILRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 110

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---G 117
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +      
Sbjct: 111 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTTN 170

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G    ++LNN  W      +D L+++G +  V  M++ ESV+ RL+ EQ +S+ EF Y 
Sbjct: 171 GGDDSFVVLNNYDWWKEFTLLDFLKKVGRYARVGTMMAKESVKKRLESEQGMSYTEFTYQ 230

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTK 236
           +LQ YDF+ L +N    +Q GGSDQWGNI  G +L  ++      + LT PLL  + GTK
Sbjct: 231 LLQGYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTK 290

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGK 293
            GK+  GAIWL+  M SPY F+QY+ ++ DADVV F K LT L M EI   +   +    
Sbjct: 291 FGKSEDGAIWLSPAMLSPYKFYQYFFSVPDADVVRFLKILTFLDMDEIMELEVKMRSPSY 350

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAM----------ECFDMSIHSQHMPTISISK 343
             N A++ +A E T  VHG+E  ++A  A            +   +   ++ +P+ S+S 
Sbjct: 351 VPNTAQRRLAEEATRFVHGQEGLDEALKATEALRPGAETKLDWKTIEGIAKDVPSCSLSY 410

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           DEV   + LL L +  G   S + ARR LK   + +NN+ I +E  +I+ +D      + 
Sbjct: 411 DEV-LNLSLLDLSISTGLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLL 469

Query: 404 LSFGKKNHIICHLC 417
           LS GKKN ++  + 
Sbjct: 470 LSAGKKNKVVVRIS 483


>gi|258540208|ref|YP_003174707.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257151884|emb|CAR90856.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 423

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 217/428 (50%), Gaps = 18/428 (4%)

Query: 1   MP-AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    +   L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+
Sbjct: 1   MTETQRGQILDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMI 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G
Sbjct: 61  LKRFQLMGHRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----G 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y IL
Sbjct: 117 TDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQIL 174

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           Q+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P    + LT+PL+  A GTK 
Sbjct: 175 QSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKF 234

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI     A     E 
Sbjct: 235 GKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEK 294

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RG 349
             A++ +A  +T  VHG++  ++A + +   F   +       I     +          
Sbjct: 295 RAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKQGFKQFPTVEAPQTA 354

Query: 350 MGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
             ++T +V       S  +AR  +++ AI IN +   +   ++          + +  GK
Sbjct: 355 ENIVTWLVDTTKIEPSRRQAREDIQNGAITINGTRQRDLDFEVDPSTHFDGQYVIVRRGK 414

Query: 409 KNHIICHL 416
           K + +  +
Sbjct: 415 KRYFLVKI 422


>gi|256844327|ref|ZP_05549813.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|295692058|ref|YP_003600668.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|256613405|gb|EEU18608.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|295030164|emb|CBL49643.1| Tyrosyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 420

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 213/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEESLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLSKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  +I +  +  I        S +  +    ++
Sbjct: 297 KKLAEEVTKFVHGEAGLEEAKMITDALFSGNIKNLSVAQIEQGLKNAPSAEAGNEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +   ++          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVNGDREQSTDFEVDPSSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|332639171|ref|ZP_08418034.1| tyrosyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 419

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 221/425 (52%), Gaps = 25/425 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              D L  L+ RG I+Q ++   L    ++  +  Y+G D T  S+H GHL   M+L   
Sbjct: 1   MAEDILQELAWRGAINQTTDEDGLREQMTKEQIGVYVGIDPTGDSMHIGHLIPFMILKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G KP+ ++GG T  IGDPS +   R+++  +++  N+EKI+           G+   
Sbjct: 61  QLAGQKPVIVVGGATGSIGDPSGKKSERKLLSQEDVAANVEKIRAQMVKLF----GEDGF 116

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +  +D+LRE G  FS+N ML+ + V SRL  E  +SF EF Y ILQ+ D
Sbjct: 117 TIVNNFDWLGKLSLLDMLREYGKLFSINTMLAKDVVASRL--EAGISFTEFTYQILQSID 174

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F EL K  + RLQ+GGSDQWGNI  GIDL  +L+      F LT PLL  A GTK GKT 
Sbjct: 175 FHELWKRENVRLQVGGSDQWGNITGGIDLIHKLEGGEAPAFGLTVPLLLKADGTKFGKTE 234

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
            GA+WL+ E T+P+ F+Q+W N  D+DV    K  T L   EI        +      A+
Sbjct: 235 GGAVWLDPEKTTPFEFYQFWLNTADSDVEKMLKYFTFLSQDEISALVADLQENAAARNAQ 294

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSR 348
           + +A E+TT VHG E  + A T     F  +  ++           ++PT  I   E   
Sbjct: 295 RRLAQEVTTFVHGAEAVKTAETMTKVLFGNADVAELTTEEVAILAGNVPTFEIDNAE--- 351

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            +GLL L+V AG   S   AR+ +K  AI+IN   I++E+  I          + +  GK
Sbjct: 352 -IGLLDLVVAAGLEKSKTAARKSVKDGAIRINGEQITDEEAVINPTAKYDGQYVIVKRGK 410

Query: 409 KNHII 413
           K   +
Sbjct: 411 KKWAV 415


>gi|329121680|ref|ZP_08250297.1| tyrosine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327468150|gb|EGF13636.1| tyrosine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 418

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 138/420 (32%), Positives = 211/420 (50%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELTWRGAINQQTDAEGLYKLTGEKAISLYCGVDPTGDSMHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R +   ++++ N++ +    +       G  +   +
Sbjct: 62  GHHPYMLIGGATGSIGDPSGRKTERVLQSMEKVEHNVKCLTAQLTKLF---GGSENITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +DLLR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ DF  
Sbjct: 119 NNYEWLSKISLLDLLRDYGKHFNINTMLAKDIVASRL--DTGISFTEFTYQILQSIDFRH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLG--ERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GG+DQWGNI  G+D    +  +  +++ LT PL+  A GTK GKT  GA
Sbjct: 177 LYLTRDVQLQIGGADQWGNITSGVDFIHTKEGRQAQVYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ + TS Y F+Q+W N DD DVV + K  T L   EID          E   A+K +
Sbjct: 237 VWLDSKKTSTYEFYQFWFNQDDRDVVRYLKFFTFLTKEEIDELDKLTQSQPEKRTAQKRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLI 356
           A E+T  VHG +  ++A       F  +I    +  I  +      G      M ++  +
Sbjct: 297 AEEVTRFVHGEDGLKEALKVTEALFTGNIQELTLSEIEGAFKNTEGGNVHEAPMNIVEAL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S  +AR  +++ AI IN   +++ +  +          I +  GKK +    +
Sbjct: 357 VQGGVEKSKRQAREDIENGAISINGVKVTDLEANVTAHPNTEGKYIIVRKGKKKYFSIKI 416


>gi|296164588|ref|ZP_06847156.1| tyrosine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900068|gb|EFG79506.1| tyrosine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 426

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 151/426 (35%), Positives = 227/426 (53%), Gaps = 16/426 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  L  RG I Q ++   L     +G +T Y G+D TA+SLHAGHL  L+ L   
Sbjct: 1   MSSGILDELGWRGLIAQSTDLGALAAEAQRGPMTVYAGFDPTAASLHAGHLVPLLALRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGK 120
           Q+ GH+PI L GG T +IGDP      R +  +  + E  E+I+G    F+ +   G   
Sbjct: 61  QRAGHRPIVLAGGATGMIGDPRDVG-ERTLNEADTVAEWTERIRGQLERFVDFSDSGESA 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+++NN  W   +  I+ LR++G  FSVN ML  ++VR RL+ E  +S+ EF+YM+LQ
Sbjct: 120 TGAVVVNNLDWTAPLSAIEFLRDLGKHFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+VEL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+
Sbjct: 179 ANDYVELHRRYGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKS 238

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
              G++WL+  MT+PY ++QY+ N  DADV+ + +  T L   E+  + +   +  +   
Sbjct: 239 TGGGSLWLDPAMTTPYAWYQYFFNTADADVIRYLRWFTFLTADELGELEQATAERPQQRA 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------QHMPTISISKDEVSRG 349
           A++ +A E+T +VHG    E    A+   F                +   S+++ +    
Sbjct: 299 AQRRLARELTVLVHGEAATEAVEHASRALFGQGELDRLDEATLAAALREASVAELKPGGA 358

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            G++ L+V +G + S   ARR L    + +NN  I NE+   +  DF     + L  GK+
Sbjct: 359 DGIVDLLVSSGLSESRKAARRTLNEGGVSVNNVRIDNEEWAPRPSDFLHGRWLVLRRGKR 418

Query: 410 NHIICH 415
                 
Sbjct: 419 TVAGIE 424


>gi|58336534|ref|YP_193119.1| Tyr-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903085|ref|ZP_04020890.1| Tyr-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|75358125|sp|Q5FMI6|SYY_LACAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58253851|gb|AAV42088.1| tyr-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227869164|gb|EEJ76585.1| Tyr-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 420

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 147/423 (34%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRTTERVLQTAEQVKHNEESLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  I  ID LR+ G +F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKINLIDFLRDYGKYFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GG DQWGNI  GIDL  +        F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGGDQWGNITAGIDLIHKLEGSDRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F   I +  +  I        S +  S    ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITDALFSGDIKNLSVTQIEQGLKNAPSAEAGSEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +   ++          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVNGDREQSVDFEVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|224532002|ref|ZP_03672634.1| tyrosyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511467|gb|EEF81873.1| tyrosyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 405

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 159/412 (38%), Positives = 238/412 (57%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L+ L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALNRLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+ +      
Sbjct: 61  QYGHIPIVLIGDSTTKIGDPSGKSEMRKILSSEEISNNAVLIKNQLQRITKFSSK----C 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII G+DL  R    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKLENCRLQIGGDDQWGNIISGVDLIRRKFGAEAFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLEEEVLLINLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + N+   +   DF +   I+L  GKK  +   L
Sbjct: 355 KSEGRRLIDSGGVYINGKRVENQNHCLTRVDF-NNNEIELRVGKKKFLRIIL 405


>gi|160945187|ref|ZP_02092413.1| hypothetical protein FAEPRAM212_02706 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442918|gb|EDP19923.1| hypothetical protein FAEPRAM212_02706 [Faecalibacterium prausnitzii
           M21/2]
          Length = 406

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 170/391 (43%), Positives = 243/391 (62%), Gaps = 7/391 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   LYEELKARGLVAQITDEEIID-LINNGKATFYIGFDCTADSLTAGHFLALTLMKRLQLAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+   +I  N    K     FI +  G   ALMLN
Sbjct: 62  NKPIALIGGGTTMIGDPSGRTDMRKMLTKDDIAHNAACFKKQMEKFIDFSEG--KALMLN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 120 NADWLLDLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYM 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 178 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTVTLLTDSQGKKMGKTAGNAVWL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  Q + +NEAK+I+A E+T
Sbjct: 238 DPNKTSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWQNQRLNEAKEILAYEMT 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           +MVHG+EEAEKA  AA   F  +    +HMP+  +++ +++ G +G+LTL+VKAG A S 
Sbjct: 298 SMVHGKEEAEKAQNAARALFSGNAMDTEHMPSTQLTEADLTDGAIGILTLMVKAGLAASN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            EARR +    +  +   ++   +    +  
Sbjct: 358 GEARRLVVQGGVLADGEKVAAPTVSFTAEQL 388


>gi|229553183|ref|ZP_04441908.1| tyrosine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229313479|gb|EEN79452.1| tyrosine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 429

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 217/428 (50%), Gaps = 18/428 (4%)

Query: 1   MP-AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    +   L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+
Sbjct: 7   MTETQRGQILDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMI 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G
Sbjct: 67  LKRFQLMGHRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----G 122

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y IL
Sbjct: 123 TDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           Q+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P    + LT+PL+  A GTK 
Sbjct: 181 QSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI     A     E 
Sbjct: 241 GKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEK 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RG 349
             A++ +A  +T  VHG++  ++A + +   F   +       I     +          
Sbjct: 301 RAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKQGFKQFPTVEAPQTA 360

Query: 350 MGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
             ++T +V       S  +AR  +++ AI IN +   +   ++          + +  GK
Sbjct: 361 ENIVTWLVDTTKIEPSRRQAREDIQNGAITINGTRQRDLDFEVDPSTHFDGQYVIVRRGK 420

Query: 409 KNHIICHL 416
           K + +  +
Sbjct: 421 KRYFLVKI 428


>gi|295105579|emb|CBL03123.1| tyrosyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 406

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 170/391 (43%), Positives = 243/391 (62%), Gaps = 7/391 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   LYEELKARGLVAQITDEEIID-LINNGKATFYIGFDCTADSLTAGHFLALTLMKRLQLAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+   +I  N    K     FI +  G   ALMLN
Sbjct: 62  NKPIALIGGGTTMIGDPSGRTDMRKMLTKDDIAHNAACFKKQMEKFIDFSEG--KALMLN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 120 NADWLLDLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYM 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 178 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTVTLLTDSQGKKMGKTAGNAVWL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  Q + +NEAK+I+A E+T
Sbjct: 238 DPNKTSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWQDQRLNEAKEILAYEMT 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           +MVHG+EEAEKA  AA   F  +    +HMP+  +++ +++ G +G+LTL+VKAG A S 
Sbjct: 298 SMVHGKEEAEKAQNAARALFSGNAMDTEHMPSTQLTEADLTDGAIGILTLMVKAGLAASN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            EARR +    +  +   ++   +    +  
Sbjct: 358 GEARRLVVQGGVLADGEKVAAPTVSFTAEQL 388


>gi|145594448|ref|YP_001158745.1| tyrosyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145303785|gb|ABP54367.1| tyrosyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 428

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 140/423 (33%), Positives = 214/423 (50%), Gaps = 12/423 (2%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  +      L  RG I   +   EL  L        Y+G+D TASSLH G L Q++   
Sbjct: 8   PQGRDTLFDDLRWRGLIQDSTGLDELRALLDGPGAAFYVGFDPTASSLHVGSLMQVVTAR 67

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P+ L+GG T  IGDP      R +   + +   + +I+   + F+ Y  G  
Sbjct: 68  RLQLAGHRPLLLVGGATGQIGDPKE-SAERVLNSPEVVAGWVARIRDQLAPFVSY-QGAN 125

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A ++NN  W   +  ++ LR++G  F VNRML+ E VR+RL  E  +SF EF+Y +LQA
Sbjct: 126 AAQLVNNLDWTGEMSVVEFLRDVGKHFPVNRMLAREVVRARL--ESGISFTEFSYQLLQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF EL + + C+LQ GGSDQWGNI  G+D   R     + A T+PL+T + GTK GKT 
Sbjct: 184 NDFFELHRRHGCQLQFGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKSDGTKFGKTE 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAK 299
            GA+WL+ E+TSPY F+Q+W N +D DV  + +  +  P +E++       +      A+
Sbjct: 244 GGAVWLDPELTSPYAFYQFWVNAEDRDVARYLRYFSFRPRAELEALEKEAAERPAARVAQ 303

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGLL 353
           + +A E+TT+VHG  E  +   A+   F     +   P              +     ++
Sbjct: 304 RALAEELTTLVHGEREMAQVVAASQALFGRGSLADLSPATLRAALTEAGLVHLDELPDVV 363

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+ ++G   S  EARR +      +NN+ +S+ +  +   D      + L  GK++   
Sbjct: 364 GLLKESGLVPSNKEARRVIAEGGAYLNNNRVSSTEATVAPADLLHDRYLVLRRGKRSFAG 423

Query: 414 CHL 416
             L
Sbjct: 424 VEL 426


>gi|88607296|ref|YP_505770.1| tyrosyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123494296|sp|Q2GIN1|SYY_ANAPZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|88598359|gb|ABD43829.1| tyrosyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 412

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 187/415 (45%), Positives = 272/415 (65%), Gaps = 7/415 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            F S+FL+ L  RG++HQ+++   LD + S G VTAYIG+D TA+SLH G L Q+MLL +
Sbjct: 2   EFNSEFLATLCARGYLHQLTDATALDGIMSSGAVTAYIGFDCTANSLHIGSLMQIMLLRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI L+GG T+ +GDPS ++++R M+    I  N E I  +   F+       D
Sbjct: 62  LQRFGHKPIVLLGGATTKVGDPSGKEKTRAMLSEDNISANKEGILRVIKKFL-----SED 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++++N  WL +  Y+D LREIGS FSVN ML  ESV+SRL R+Q LSFLEF+Y++LQ+Y
Sbjct: 117 VVVVDNAEWLGNYGYLDFLREIGSKFSVNVMLGLESVKSRLSRDQQLSFLEFSYVLLQSY 176

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL K Y C LQ+GGSDQWGNI+ GIDL  ++  P+L+ +T+PLL  +SG KMGKT  
Sbjct: 177 DFVELHKRYGCILQIGGSDQWGNIVSGIDLARKMGCPQLYGVTTPLLLNSSGAKMGKTAD 236

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GAIWL++ + SPYN+WQY+RN+ D DV    +  T LP+SEI+R+  L+G+E+NEAKKI+
Sbjct: 237 GAIWLDETLYSPYNYWQYFRNVPDQDVGRLLRLFTELPLSEIERLEALKGEELNEAKKIL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           AT +T++ HG E A +    A++ F+ +     + +I+ S+  + +G+ +  L+   G  
Sbjct: 297 ATAVTSICHGAEVALQVENQALKVFEHND-HDELRSITFSRKTLGQGIPISKLLHMWGLE 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK-LSFGKKNHIICHL 416
            S +  RR ++    KIN  ++ +E+  +   DFD  G    +  GKK  +   L
Sbjct: 356 ESISAGRRLIRGGGCKINGGVVLDEEKLLNCGDFDDNGGYVAVFCGKKRRLKVVL 410


>gi|224533242|ref|ZP_03673842.1| tyrosine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|225549129|ref|ZP_03770104.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|224511969|gb|EEF82370.1| tyrosine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|225370355|gb|EEG99793.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 405

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 157/412 (38%), Positives = 242/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGIHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSVYDFYQYFRNTSDSDVKTFLYLFTFLKEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +   +S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVSS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKKN +   L
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKNFLRIVL 405


>gi|312149218|gb|ADQ29289.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 405

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 157/412 (38%), Positives = 240/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKKN +   L
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKNFLRIVL 405


>gi|258509012|ref|YP_003171763.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148939|emb|CAR87912.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650304|dbj|BAI42466.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 423

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 149/427 (34%), Positives = 219/427 (51%), Gaps = 31/427 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  G
Sbjct: 9   ILDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLMG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G  D  +++
Sbjct: 69  HRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----GTDDFRIVD 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L
Sbjct: 125 NYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQILQSVDFLHL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAI 245
            K+ D +LQ+GG+DQWGNI  GIDL  R + P    + LT+PL+  A GTK GK+  GA+
Sbjct: 183 FKHEDVQLQIGGADQWGNITAGIDLIHRFEGPDARAYGLTNPLMLKADGTKFGKSAGGAV 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DDADV  F K  T L   EI     A     E   A++ +A
Sbjct: 243 WLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEKRAAQRELA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM------------- 350
             +T  VHG++  ++A + +   F   +         +S D++ +G              
Sbjct: 303 RAVTKFVHGQKAVDQAESISAALFSGDV-------ADLSADDIKKGFKQFPTVEAPQTAE 355

Query: 351 GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++T +V       S  +AR  +++ AI IN S   +   ++          + +  GKK
Sbjct: 356 NIVTWLVDTTKIEPSRRQAREDIQNGAITINGSRQRDLDFEVDPSTHFDGQYVIVRRGKK 415

Query: 410 NHIICHL 416
            + +  +
Sbjct: 416 RYFLVEI 422


>gi|225550104|ref|ZP_03771064.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369216|gb|EEG98669.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 405

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 158/412 (38%), Positives = 240/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKKN +   L
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKNFLRIVL 405


>gi|225552404|ref|ZP_03773344.1| tyrosyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371402|gb|EEH00832.1| tyrosyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 405

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 157/408 (38%), Positives = 236/408 (57%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  IPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGKT  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNRSETFGLTFPLITRSDGKKMGKTEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +   +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKRNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F       ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGGGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + ++   +  +DF +   ++L  GKK  +   L
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRIVL 405


>gi|199599074|ref|ZP_03212480.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199590037|gb|EDY98137.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 423

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 215/420 (51%), Gaps = 17/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  G
Sbjct: 9   ILDELKWRGALNQLTDESGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLMG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G  D  +++
Sbjct: 69  HRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----GTDDFRIVD 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L
Sbjct: 125 NYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQILQSVDFLHL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAI 245
            K+ D +LQ+GG+DQWGNI  GIDL  RL+ P    + LT+PL+  A GTK GK+  GA+
Sbjct: 183 FKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKFGKSAGGAV 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DDADV  F K  T L   EI     A     E   A++ +A
Sbjct: 243 WLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEKRAAQRELA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
             +T  VHG++  ++A + +   F   +       I     +            ++T +V
Sbjct: 303 RAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKQGFKQFPTVEAPQTAENIVTWLV 362

Query: 358 K-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
                  S  +AR  +++ AI IN +   +   ++          + +  GKK + +  +
Sbjct: 363 DTTKIEPSRRQAREDIQNGAITINGTRQRDLDFEVDPSTHFDGQYVIVRRGKKRYFLVKI 422


>gi|221217684|ref|ZP_03589152.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192361|gb|EEE18580.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 405

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 158/412 (38%), Positives = 241/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L+K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLSKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKKN +   L
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKNFLRIVL 405


>gi|224533693|ref|ZP_03674281.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226320413|ref|ZP_03795980.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|224512986|gb|EEF83349.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226234166|gb|EEH32880.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 405

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 155/412 (37%), Positives = 239/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQGASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKK  +   +
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRIVI 405


>gi|313892288|ref|ZP_07825881.1| tyrosine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119426|gb|EFR42625.1| tyrosine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 418

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 138/420 (32%), Positives = 210/420 (50%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELTWRGAINQQTDAEGLYKLTGEKAISLYCGVDPTGDSMHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R +   ++++ N++ +    +       G  +   +
Sbjct: 62  GHHPYMLIGGATGSIGDPSGRKTERVLQSMEKVEHNVKCLTAQLTKLF---GGSENITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +DLLR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ DF  
Sbjct: 119 NNYEWLSKISLLDLLRDYGKHFNINTMLAKDIVASRL--DTGISFTEFTYQILQSIDFRH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLG--ERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GG+DQWGNI  G+D    +  +   ++ LT PL+  A GTK GKT  GA
Sbjct: 177 LYLTRDVQLQIGGADQWGNITSGVDFIHTKEGRDAPVYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ + TS Y F+Q+W N DD DVV + K  T L   EID          E   A+K +
Sbjct: 237 VWLDSKKTSTYEFYQFWFNQDDRDVVRYLKFFTFLTKEEIDELDKLTQSQPEKRTAQKRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLI 356
           A E+T  VHG +  ++A       F  +I    +  I  +      G      M ++  +
Sbjct: 297 AEEVTRFVHGEDGLKEALKVTEALFTGNIQELTLSEIEGAFKNTEGGNVHEAPMNIVEAL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S  +AR  +++ AI IN   +++ +  +          I +  GKK +    +
Sbjct: 357 VQGGVEQSKRQAREDIENGAISINGVKVTDLEANVTAHPNTEGKYIIVRKGKKKYFSIKI 416


>gi|229820848|ref|YP_002882374.1| tyrosyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566761|gb|ACQ80612.1| tyrosyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 422

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 134/414 (32%), Positives = 214/414 (51%), Gaps = 11/414 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L  RG I Q ++   L  L   G VT Y G+D +A SLH G+L  ++ +   Q
Sbjct: 1   MTTILEELDWRGLIAQSTDREALGELLDAGPVTFYGGFDPSAPSLHVGNLVLILTMRRFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P+ L+GG T +IGDP      R +     +   + KI+     ++ +  G T A 
Sbjct: 61  LAGHRPVGLVGGATGLIGDPRM-SGERTLNAPDVVAGWVGKIRAQIEPYLDFD-GPTAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID LR++G  F +  ML+ E+V  RL  E  LSF EF+Y ILQ  D+
Sbjct: 119 MVNNLDWTAPLSAIDFLRDVGKHFRLGTMLAKETVARRLASEDGLSFTEFSYQILQGMDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +  D RLQ+GG+DQWGN++ G++L  +++     ALT+PL+T   GTK GKT  G+
Sbjct: 179 LELFRRDDVRLQLGGNDQWGNLLSGVELIRKVEGAGAHALTTPLITKPDGTKFGKTEGGS 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ E+TSPY F+Q+W N  DADV  + +  T L   EI+   +A  +     EA++ +
Sbjct: 239 IWLDPELTSPYAFYQFWFNAADADVGGYLRVFTFLSREEIEALDVAVRERPGAREAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRG-MGLLTL 355
           A  +T +VHG +  E+   A+   F           +       +    +  G   ++  
Sbjct: 299 AASVTDLVHGAQARERVERASRALFGRDDLDALDERTLADAVAELPSAPLRPGETTIVDA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + + G  +  N ARR +      +NN  + +    + ++D  +   + +  G++
Sbjct: 359 LAETGLVSGRNAARRAVDEGGAYVNNVKVDDADRVLAVEDLLADRFVLVRRGRR 412


>gi|195941280|ref|ZP_03086662.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi 80a]
          Length = 405

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 156/412 (37%), Positives = 239/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKK  +   L
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRIVL 405


>gi|285808518|gb|ADC36041.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 270]
          Length = 428

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 153/430 (35%), Positives = 235/430 (54%), Gaps = 24/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  R  + + +    L    + G VTAYIG+D TASSLH G L  +M L  LQ+ 
Sbjct: 2   NLFDELQWRAMVSEAT--EGLADAFATGRVTAYIGFDPTASSLHVGSLLTVMGLARLQRF 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GGGT +IGDPS + + R ++ +++I  N+  I+     F+ + T  T A ++
Sbjct: 60  GHAPIAIVGGGTGMIGDPSGKSQERVLLSAEQIDANVVGIRAQLERFLDFDTPGTAARIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  +  LR+ G  F+VN M+  ESV  RL+ E  +SF EF+Y++LQAYDF++
Sbjct: 120 NNADWLATIDLVSFLRDAGKHFTVNYMMQKESVSRRLESEDGISFTEFSYLVLQAYDFLQ 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C LQMGG+DQWGNI  GIDL  +++  K   L  PL+ +ASG K GKT +G IW
Sbjct: 180 LFDRYGCTLQMGGTDQWGNITAGIDLIRKVRAKKAHGLVWPLMKSASGAKFGKTEAGTIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+   T    F Q+W N DD DV+++ K  T L   E+D +        E   A++++A 
Sbjct: 240 LDAARTPVQEFRQFWLNTDDRDVIAYLKFFTFLTRDEVDDLEAQVQRVPEQRAAQQVLAD 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH----------------SQHMPTISISKDEVS- 347
           ++TT+VHGRE+A +A +A    F  S                  +  +P+ SI+ DE   
Sbjct: 300 QVTTLVHGREDAARAESANAVLFGASTTGGAVDAAQLADSLLAITGDVPSTSIAADEFEG 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ ++    G   S +EARR ++   + +N+  I++   ++   D        L  
Sbjct: 360 DGLSVVDVVARATG--GSKSEARRLVQQGGVSVNDHKIADANARLTRADALDGRVFLLRK 417

Query: 407 GKKNHIICHL 416
           G +   +  L
Sbjct: 418 GSRQRFVIRL 427


>gi|308235812|ref|ZP_07666549.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114474|ref|YP_003985695.1| tyrosine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945968|gb|ADP38672.1| tyrosine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 439

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 133/420 (31%), Positives = 210/420 (50%), Gaps = 19/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E+++      +    G+     +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNSKDIVAGWAERLRKQIGRILPLD-GENPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQGNDFLY 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+   A+W
Sbjct: 192 LFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGASVHVFTSPIITDNQGRKFGKSEGNAMW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M SPY F+Q+W N  D +VV   K  T LP SEI+R      +     EA++++A 
Sbjct: 252 LDPTMLSPYRFYQFWFNQPDDEVVKLLKAFTFLPKSEIERLNKQIQEDPGSREAQRVLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------------SISKDEVSRG 349
           E+T+ VHG +   +A  A+   F                           S+   + + G
Sbjct: 312 EVTSFVHGEDVTNQAIAASSALFGKGDLDAIDEQTLEAALDGVKVKAQDGSLEFAKANSG 371

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++   V AG   + +EARR +++  + +NN+ + +    +    F       +  GKK
Sbjct: 372 DRVVEAAVAAGLFRTISEARRAIEAGGLYVNNNRVDSVDDILNDNSFLHGRFALIRRGKK 431


>gi|81428383|ref|YP_395383.1| tyrosyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|97201513|sp|Q38XK7|SYY_LACSS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78610025|emb|CAI55073.1| Tyrosyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 419

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 142/423 (33%), Positives = 219/423 (51%), Gaps = 15/423 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + + +  L+ R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   
Sbjct: 1   MQKNIIDELTWRDAINQQTDADGLRELTEKKSISLYCGVDPTGDSMHIGHLIPFMMMKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH P  ++GGGT  IGDPS R   R++   + +Q N+E + G             + 
Sbjct: 61  QLAGHHPYIVIGGGTGSIGDPSGRKSERQLQTMEMVQHNVEALSGQMKRLFGEDA---NV 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  WL  I  +D LR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ D
Sbjct: 118 SMVNNYDWLSKISLLDFLRDYGKLFNINTMLAKDVVASRL--DVGISFTEFTYQILQSVD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F+ L K +D +LQ+GG+DQWGNI  GID+  +++    +++ LT PL+  A GTK GKT 
Sbjct: 176 FMHLYKAHDVQLQIGGADQWGNITSGIDMIHKIEGSETEVYGLTIPLMLKADGTKFGKTA 235

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
            GAIWL+ E T+PY F+Q+W N DD DVV + K  T L  +EI+          E  EA+
Sbjct: 236 GGAIWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDEAEINELAKTVETAPEKREAQ 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLL 353
           + +A E+T  VHG+ E E A       F   I +  +     +  +            ++
Sbjct: 296 RRLAEEVTRFVHGQAELEGAQKITEVLFSGDIKALDVKEAEQAFQKAPTVEITAEKKNIV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V AG  +S  +AR  +++ AI IN   +    L+I   +      + +  GKK + +
Sbjct: 356 DFLVDAGIESSKRQAREDVQNGAITINGDRLRETTLEIDPSENFEGKFVIVRRGKKKYFL 415

Query: 414 CHL 416
             +
Sbjct: 416 ARV 418


>gi|239917922|ref|YP_002957480.1| tyrosyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239839129|gb|ACS30926.1| tyrosyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 447

 Score =  339 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 139/418 (33%), Positives = 215/418 (51%), Gaps = 16/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++   L+   +   V+ Y G+D TA SLH GHL QL+ L  LQ  
Sbjct: 23  NVWQELRWRGLVHVSTDEAALEQALAGEPVSYYCGFDPTAPSLHLGHLVQLLTLRRLQLA 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P +L+GG T +IGDP  +   R +   + +   +E ++     ++ +  G+  A M+
Sbjct: 83  GHRPYALVGGATGLIGDPR-QTSERVLNSQETVAAWVESLRAQIEPYLSFE-GENAATMV 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+IG  F V  M+  E V  RL  ++ +S+ EF+Y +LQ  DF+E
Sbjct: 141 NNLDWTAGMSALDFLRDIGKNFRVGTMVKKEIVAKRLNSDEGISYTEFSYQVLQGNDFLE 200

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGN+  G +L  +++     AL +PL+T A GTK GK+   A+W
Sbjct: 201 LHRRHGVTLQTGGSDQWGNLTAGTELIRKVEGTHAHALGTPLITNADGTKFGKSEGNAVW 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ EM SPY F+Q+W N  DADVV   K  T L  +EI+  A+         EA+K +A 
Sbjct: 261 LDAEMCSPYAFYQFWLNTADADVVDRLKVFTFLTRAEIEEYAQKVADEPFRREAQKRLAW 320

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG-MGL 352
           E+T + HG E   K   A+   F     +             +P    ++ E   G +  
Sbjct: 321 EVTALAHGEETTTKVIEASQAVFGGGDLTTVDPDTLTAVLAELPQADRTQWEGEPGTVTA 380

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           + L+V  G   S +EARR ++     +NN  +++        D  +  ++ +  GKKN
Sbjct: 381 VELLVSTGLVASRSEARRTVRDGGASVNNVRVTDADQVFTRDDAFAGRHLLVRRGKKN 438


>gi|183601732|ref|ZP_02963102.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683736|ref|YP_002470119.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190770|ref|YP_002968164.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196176|ref|YP_002969731.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|254783568|sp|B8DU64|SYY_BIFA0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|183219338|gb|EDT89979.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621386|gb|ACL29543.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249162|gb|ACS46102.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250730|gb|ACS47669.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289178506|gb|ADC85752.1| Tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793759|gb|ADG33294.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 440

 Score =  339 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 217/421 (51%), Gaps = 20/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++   L    +   V  Y G+D TA SLH G+L QL+++  LQ+ 
Sbjct: 14  SVLDELEWRGLISQSTDRDRLAHTLNGEPVHYYCGFDPTAPSLHIGNLVQLIIMRHLQEA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +++  E+++      ++   G      +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERILNPKDIVEQWCERLRIQIGGILEQE-GSNPVTFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  ++  +D LR+IG  F V  M+S + V  RL  E+ +SF EF+Y +LQ  D++ 
Sbjct: 132 SNYDWTATMNVLDFLRDIGKNFRVGTMISKDIVARRLNSEEGISFTEFSYQVLQGNDYLY 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +YDC L++GGSDQWGN+  G+DL  +++   +  + SP++T A+G K GK+   A+W
Sbjct: 192 LYDHYDCVLELGGSDQWGNLTSGLDLIHKVRGVNVNVMASPIITDANGKKFGKSEGNAVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+  M S Y F+Q+W N  D ++ S  K  T LP +EI+R   A        EA++++A 
Sbjct: 252 LDPNMLSVYKFYQFWLNRPDVEMASLLKAFTFLPKAEIERLVEATDTNPGAREAQRVLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------------DEVSR 348
           E+T++VHG E   KA  A+   F        +   ++                   +   
Sbjct: 312 EVTSLVHGDEPTRKAIDASASLFGRGGDLADIDLETLESVLDGLKVENEAGEKVFAQALP 371

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  +    V AG   S +EAR+ +KS  + +NN  + +E+  +   DF     + L  GK
Sbjct: 372 GDRIAQAGVSAGLFKSISEARKTIKSGGVYVNNVRVEDEEQLLGDGDFLKGRFVVLRRGK 431

Query: 409 K 409
           K
Sbjct: 432 K 432


>gi|289704496|ref|ZP_06500931.1| tyrosine--tRNA ligase [Micrococcus luteus SK58]
 gi|289558754|gb|EFD52010.1| tyrosine--tRNA ligase [Micrococcus luteus SK58]
          Length = 447

 Score =  339 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 138/418 (33%), Positives = 215/418 (51%), Gaps = 16/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++   L+   +   V+ Y G+D TA SLH GHL QL+ L  LQ  
Sbjct: 23  NVWQELRWRGLVHVSTDEAALEQALAGEPVSYYCGFDPTAPSLHLGHLVQLLTLRRLQLA 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P +L+GG T +IGDP  +   R +   + +   +E ++     ++ +  G+  A M+
Sbjct: 83  GHRPYALVGGATGLIGDPR-QTSERVLNSQETVAAWVESLRAQIEPYLSFE-GENAATMV 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR++G  F V  M+  E V  RL  ++ +S+ EF+Y +LQ  DF+E
Sbjct: 141 NNLDWTAGMSALDFLRDVGKNFRVGTMVKKEIVAKRLNSDEGISYTEFSYQVLQGNDFLE 200

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGN+  G +L  +++     AL +PL+T A GTK GK+   A+W
Sbjct: 201 LHRRHGVTLQTGGSDQWGNLTAGTELIRKVEGTHAHALGTPLITNADGTKFGKSEGNAVW 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ EM SPY F+Q+W N  DADVV   K  T L  +EI+  A+         EA+K +A 
Sbjct: 261 LDAEMCSPYAFYQFWLNTADADVVDRLKVFTFLTRAEIEEYAQKVADEPFRREAQKRLAW 320

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG-MGL 352
           E+T + HG E   K   A+   F     +             +P    ++ E   G +  
Sbjct: 321 EVTALAHGEETTTKVIEASQAVFGGGDLTTVDPDTLTAVLAELPQADRTQWEGEPGTVTA 380

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           + L+V  G   S +EARR ++     +NN  +++        D  +  ++ +  GKKN
Sbjct: 381 VELLVSTGLVASRSEARRTVRDGGASVNNVRVTDADQVFTRDDAFAGRHLLVRRGKKN 438


>gi|111115193|ref|YP_709811.1| tyrosyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145731|sp|Q0SNE3|SYY_BORAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110890467|gb|ABH01635.1| tyrosyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 405

 Score =  339 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 158/412 (38%), Positives = 239/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALNLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++  +EI  N   IK       K+ +      
Sbjct: 61  QHGHIPIVLIGDSTTKIGDPSGKSEMRKILSLEEISNNAFSIKNQLQRITKFSSK----C 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKKRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIRNCRLQIGGDDQWGNIISGIDLIRKKAGVETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSNLEEEVLLINLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + N+   +  +DF +   I+L  GKK  +   L
Sbjct: 355 KSEGRRLIDSGGVYINGKRVENQNHCLTRKDF-NNNEIELRVGKKKFLRIVL 405


>gi|313895688|ref|ZP_07829244.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975814|gb|EFR41273.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 402

 Score =  339 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 177/399 (44%), Positives = 248/399 (62%), Gaps = 10/399 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + + IL ERGF+ Q ++   L  L ++G VT YIG+D TA SLHAGH   LM +  LQ
Sbjct: 1   MQNAIDILKERGFLAQCTDEEALRKLMAEGPVTFYIGFDPTADSLHAGHFIALMAMSHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI L+GGGT  +GDPS R + R++M  + I+ N E  K   + FI +      A+
Sbjct: 61  KAGHRPICLVGGGTGTVGDPSGRTDMRKVMTDETIRHNCECFKKQIAHFIDFTED--RAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL S+ YI+LLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF
Sbjct: 119 MVDNGDWLRSLNYIELLRDVGAHFTVNRMLAAESYKQRW--EKGLTFLEFNYMIMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGG DQW NII G++L  R  +  +F LT+ LLT + GTKMGKT  GA
Sbjct: 177 LELNRRYGCRLQMGGDDQWSNIIAGVELCRRKSSKTVFGLTNKLLTKSDGTKMGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY+F+QYWRNIDDADV +    LT LPM E+  ++  +G EIN +K+I+A 
Sbjct: 237 LWLDAEKTSPYDFYQYWRNIDDADVETCLSLLTYLPMDEVRHLSAAEGAEINRSKEILAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T +VHG E A +A + A   F             + K   + G  L+ ++ + G   S
Sbjct: 297 EATKIVHGAEAAAQARSTAQALFSGGAAED------VPKVVCATGEKLVDVLTRGGVFAS 350

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             EARR ++   + +N+  +S+E   +   DF +     
Sbjct: 351 KGEARRLIQQGGVMLNDLRVSDEHYVLGDADFSNGEAFL 389


>gi|225631309|ref|ZP_03787984.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590984|gb|EEH12191.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 383

 Score =  339 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 197/380 (51%), Positives = 275/380 (72%), Gaps = 2/380 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD L      + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IK ID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKCIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T + HG +EAE A  AA+  F+ +  S  +P   I K++V+ G+ L+ L+   GF  S
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFE-NEDSSLLPDYIIKKEQVASGISLVDLLHDTGFEPS 363

Query: 365 TNEARRHLKSNAIKINNSII 384
              A+R ++ N  KIN++++
Sbjct: 364 KGAAKRLIQGNGCKINDNVV 383


>gi|223889015|ref|ZP_03623606.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885831|gb|EEF56930.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 405

 Score =  339 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 157/412 (38%), Positives = 241/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + + +L+
Sbjct: 1   MNLALSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMYLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIISGIDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKK  +   +
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRIVI 405


>gi|216264032|ref|ZP_03436026.1| tyrosyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980076|gb|EEC20898.1| tyrosyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 405

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 157/412 (38%), Positives = 239/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALNLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++  +EI  N   IK       K+ +      
Sbjct: 61  QHGHIPIVLIGDSTTKIGDPSGKSEMRKILSLEEISNNAFSIKNQLQRITKFSSK----C 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR+IG  FS+NRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDIGIHFSINRMLSFETYKKRL--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIRNCRLQIGGDDQWGNIISGIDLIRKKAGVETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSNLEEEVLLINLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + N+   +  +DF +   I+L  GKK  +   L
Sbjct: 355 KSEGRRLIDSGGVYINGKRVENQNHCLTRKDF-NNNEIELRVGKKKFLRIVL 405


>gi|191638956|ref|YP_001988122.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus casei BL23]
 gi|239629885|ref|ZP_04672916.1| tyrosyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|190713258|emb|CAQ67264.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus casei BL23]
 gi|239527497|gb|EEQ66498.1| tyrosyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327383006|gb|AEA54482.1| Tyrosyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386192|gb|AEA57666.1| Tyrosyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 424

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 147/434 (33%), Positives = 220/434 (50%), Gaps = 32/434 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +   L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L
Sbjct: 1   MTD-RGKILDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMIL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G 
Sbjct: 60  KRFQLLGHRPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GT 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  +++N  WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ
Sbjct: 116 DDFRIVDNYDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
           + DF+ L K+ D +LQ+GG+DQWGNI  GIDL  R++ P+   + LT+PL+  A GTK G
Sbjct: 174 SVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFG 233

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           K+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L    I     A     E  
Sbjct: 234 KSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKR 293

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM------ 350
           EA++ +A  +T  VHG++  ++A   +   F   +         +S D++ +G       
Sbjct: 294 EAQRELARAVTKFVHGQKAVDQAENISAALFSGDV-------AELSADDIKQGFKQFPTV 346

Query: 351 -------GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
                   ++T +V       S  +AR  +++ AI IN +       ++          +
Sbjct: 347 EAPETAENIVTWLVDTTKIEPSRRQAREDIQNGAITINGTRQRELDFEVDPSTHFDGQYV 406

Query: 403 KLSFGKKNHIICHL 416
            +  GKK + +  +
Sbjct: 407 IVRRGKKRYFLVDI 420


>gi|116495494|ref|YP_807228.1| tyrosyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116105644|gb|ABJ70786.1| tyrosyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 424

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 147/434 (33%), Positives = 220/434 (50%), Gaps = 32/434 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +   L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L
Sbjct: 1   MTD-RGKILDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMIL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G 
Sbjct: 60  KRFQLLGHRPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GT 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  +++N  WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ
Sbjct: 116 DDFRIVDNYDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
           + DF+ L K+ D +LQ+GG+DQWGNI  GIDL  R++ P+   + LT+PL+  A GTK G
Sbjct: 174 SVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFG 233

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           K+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L    I     A     E  
Sbjct: 234 KSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKR 293

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM------ 350
           EA++ +A  +T  VHG++  ++A   +   F   +         +S D++ +G       
Sbjct: 294 EAQRELARAVTKFVHGQKAVDQAENISDALFSGDV-------AELSADDIKQGFKQFPTV 346

Query: 351 -------GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
                   ++T +V       S  +AR  +++ AI IN +       ++          +
Sbjct: 347 EAPETAENIVTWLVDTTKIEPSRRQAREDIQNGAITINGTRQRELDFEVDPSTHFDGQYV 406

Query: 403 KLSFGKKNHIICHL 416
            +  GKK + +  +
Sbjct: 407 IVRRGKKRYFLVDI 420


>gi|257069302|ref|YP_003155557.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256560120|gb|ACU85967.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 422

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 143/424 (33%), Positives = 223/424 (52%), Gaps = 12/424 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               L  L+ RG + Q +    L    + G V+ Y G+D TA+SLH GHLTQ++ +  LQ
Sbjct: 1   MHSVLDELAWRGLVVQTTGREALGSALADGPVSLYCGFDPTAASLHVGHLTQVLTMRRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P +L+GG T +IGDP      R +  S+ +   +E ++   S F+    G+    
Sbjct: 61  LAGHHPYALVGGATGLIGDPRM-SGERVLNDSEIVATWVESLRDQISRFLDLE-GEYGVT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W+  +  +D LR++G  F +  ML+ ++V  RL+ ++ +S+ EF+Y +LQ  D+
Sbjct: 119 MVNNLDWIGQMSALDFLRDMGKHFRMGTMLAKDTVARRLQSDEGISYTEFSYQVLQGIDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +   LQ GG+DQWGN++ G+DL  +++   + ALT+PL+T A G+K GK+  GA
Sbjct: 179 LELHRRHGVTLQYGGNDQWGNLLSGVDLIHKVEGHDVHALTTPLVTKADGSKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+ E+TSPY F Q+W N  DADV+++ +  T     EI  +            A+K +
Sbjct: 239 VWLDAELTSPYAFHQFWLNAADADVLNYLRFFTFRSREEIAELEHATETASHQRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLI 356
           A +ITTMVHG +   +A  AA   F      +            +   EV+    L+   
Sbjct: 299 ADDITTMVHGEQATSQAKAAAAVLFGRGDVRELDEQTLLAIARELPGAEVAPTTLLVDAF 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSFGKKNHIIC 414
             AG   S   ARR  +   + +N   IS E LQ +  D      G++ L  G+KN  + 
Sbjct: 359 CDAGITASKGAARRDAQGGGLSVNGEKISAEDLQRESGDLAPLPGGHLLLRRGRKNAAMV 418

Query: 415 HLCG 418
            L G
Sbjct: 419 RLNG 422


>gi|260102211|ref|ZP_05752448.1| tyrosine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083982|gb|EEW68102.1| tyrosine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 420

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L +  ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRMYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q   + P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMASYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|295424905|ref|ZP_06817618.1| tyrosine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065405|gb|EFG56300.1| tyrosine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 420

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   V  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLRKYLAEHDDVALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N + +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERVLQTAAQVEHNEKCLTDQMKRLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN+ WL  +  ID LR+ G +F VN ML+ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIVNNKAWLGKLNLIDFLRDYGKYFQVNNMLNKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN   +L++GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKNNGVQLEIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTKKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG +  ++A       F  +I    +  I        S +  ++   ++
Sbjct: 297 KKLAEEVTKFVHGEDGLKEAQMITDALFSGNIKDLSVKQIEQGLKSAPSAETDAKAKNII 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     + +  +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVNGDREQDLEFDVDPASAFEGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
            H+
Sbjct: 417 VHV 419


>gi|255658184|ref|ZP_05403593.1| tyrosine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849492|gb|EEX69499.1| tyrosine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 402

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 177/399 (44%), Positives = 251/399 (62%), Gaps = 9/399 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++    L ERGFI Q +N +EL  L  +  VT YIG+D TA SLHAGH   LM +  +Q
Sbjct: 1   MANVFDTLKERGFIAQCTNEKELRELFDKERVTFYIGFDPTADSLHAGHFIALMAMAHMQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI L+GGGT  +GDP+ R + R+M+  ++I+ N E  K   + FI +  G   A+
Sbjct: 61  RAGHRPICLVGGGTGTVGDPTGRTDMRKMLTDEDIEHNCECFKKQIARFIDFSDG--KAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + YIDLLR++G+ F+VNRML+ E  + R   E+ L+FLEFNYM++QAYDF
Sbjct: 119 MVNNGDWLRKLNYIDLLRDVGACFTVNRMLAAECYKQRW--EKGLTFLEFNYMVMQAYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C+L+MGG DQW NII G++L  R     ++ LT+ LLT + G KMGKT  GA
Sbjct: 177 LELNRRYGCKLEMGGDDQWSNIIAGVELNRRKNNVAVYGLTNKLLTKSDGKKMGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY F+QYWRN+DDADV      LT LPM E+ R++ L+G  INEAK ++A 
Sbjct: 237 LWLDAEKTSPYEFYQYWRNVDDADVEKCLSLLTFLPMEEVHRLSSLEGSAINEAKTVLAY 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T +VHG EEA KA  AA   F  +  +Q MPT++        G  LL ++       S
Sbjct: 297 EVTKIVHGEEEANKAKKAAEALFGGAGSTQDMPTVA-----AETGKKLLDVLTAGKVFAS 351

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            +E RR ++ N + +N++ +++    ++  DF     I 
Sbjct: 352 KSEGRRLIQQNGLSLNDAKVTDVDYILQASDFTDGEAIV 390


>gi|203284283|ref|YP_002222023.1| tyrosyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|254783572|sp|B5RLQ9|SYY_BORDL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|201083726|gb|ACH93317.1| tyrosyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 406

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 169/408 (41%), Positives = 250/408 (61%), Gaps = 6/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L +RGF+ Q +N  EL  L  +  +  Y+G D T++SLH GHL   M++  LQ+ GH
Sbjct: 5   LKVLDKRGFLKQCTNLEELSTLMDREKIVFYVGVDATSASLHIGHLIPFMVMLHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+GGGT+ IGDPS +D  R+++  ++I EN++ I       I          +LNN
Sbjct: 65  IPIILIGGGTTKIGDPSGKDSMRKILLKEDIDENVKTISSQLLKIIDL---SNGGYILNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  I YI+ LRE+G +FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YDF  L+
Sbjct: 122 AEWLDGINYIEFLREVGIYFSVNRMLSFETYKRRL--KDGLSFIEFNYQLLQSYDFYMLS 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  +C+LQ+GG DQWGNI+ G+DL  R    K+F LT PL+T + G KMGK+  GA++L+
Sbjct: 180 RMKNCKLQIGGDDQWGNIVSGVDLVNRKSGNKVFGLTLPLITRSDGKKMGKSEKGAVYLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E+ S Y+F+QY+RNI D DV  F    T L   EI+R+A ++G+ +N AK+I+A EIT 
Sbjct: 240 SELYSVYDFYQYFRNIPDLDVKKFLYLFTFLEEEEIERIASVKGQLLNNAKEILAFEITK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG++EA KA++AA   F        +P   +    +   + L+ L+V A   +S +EA
Sbjct: 300 IVHGKDEALKASSAAKAAFKGGDGRADIPFFKLELTNLEESILLVDLMVLAKVVSSKSEA 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + I+   + ++   +   +F   G I+L  GKK  +   L
Sbjct: 360 RRLIDSGGVYIDKVRVGDQNYCLCKDNFI-NGEIELKIGKKKILRIVL 406


>gi|328544990|ref|YP_004305099.1| Tyrosyl-tRNA synthetase, class Ib [polymorphum gilvum SL003B-26A1]
 gi|326414732|gb|ADZ71795.1| Tyrosyl-tRNA synthetase, class Ib [Polymorphum gilvum SL003B-26A1]
          Length = 423

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 175/413 (42%), Positives = 261/413 (63%), Gaps = 3/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              KS+ L +L +RG +HQ ++   LD   + G VTAY G+D TA+SLH GHL  LM L 
Sbjct: 11  SRLKSEALQVLVDRGLVHQCTDLEALDAAFAAGPVTAYAGFDATAASLHVGHLVPLMTLR 70

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ ++GGGTS++GDPSFR+++R ++   ++ ENI  I+      +       
Sbjct: 71  WLQKLGHRPLVVLGGGTSLVGDPSFRNDARPLLTEAQVTENIAGIRRSIEGVLDLD-DSE 129

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A +++N  WL   ++++ LR+ G+ F+VNRM++F+SVRSRL  +Q L+ LEF YM+LQA
Sbjct: 130 GARLVDNAEWLTEFRFLEFLRDYGTQFTVNRMITFDSVRSRLDAQQPLTVLEFCYMMLQA 189

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL++ ++CRLQ+GGSDQWGNI+ G++L  +    +LF LT PL+TTA G KMGKT 
Sbjct: 190 VDFLELSRRHECRLQVGGSDQWGNIVNGVELARKTDGRRLFGLTVPLVTTAGGAKMGKTA 249

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WL+ +  SP+ FWQ+WRN  DADV    +  T LPMSE+ R+A L+G E+NEAKKI
Sbjct: 250 AGAVWLHPDHLSPFAFWQFWRNTADADVGKCLRLFTDLPMSEVGRLAVLEGVELNEAKKI 309

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +AT+ T +VHG   A  A       F     S   PT       ++ G+GLL L+V+ G 
Sbjct: 310 LATQATGVVHGPAAAGAALEQGEALFAGGEASAR-PTHEADCARLAAGLGLLDLLVEVGL 368

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A S   ARR ++   +++N   +++ +  +   D      + L+ G++   + 
Sbjct: 369 AASNGAARRLIEGGGLRLNGETVADPRRTVTAADLTDGR-LTLAAGRRRKAVV 420


>gi|203287819|ref|YP_002222834.1| tyrosyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|254783574|sp|B5RRH9|SYY_BORRA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|201085039|gb|ACH94613.1| tyrosyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 406

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 169/408 (41%), Positives = 250/408 (61%), Gaps = 6/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L +RGF+ Q +N  EL  L  +  +  Y+G D T++SLH GHL   M++  LQ+ GH
Sbjct: 5   LKVLDKRGFLKQCTNLEELSTLMDREKIVFYVGVDATSASLHIGHLIPFMVMLHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+GGGT+ IGDPS +D  R+++  ++I EN++ I       I          +LNN
Sbjct: 65  IPIILIGGGTTKIGDPSGKDSMRKILLKEDIDENVKTISSQLLKIIDL---SNGGYILNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  I YI+ LRE+G +FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YDF  L+
Sbjct: 122 AEWLDGINYIEFLREVGIYFSVNRMLSFETYKRRL--KDGLSFIEFNYQLLQSYDFYMLS 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  +C+LQ+GG DQWGNI+ G+DL  R    K+F LT PL+T + G KMGK+  GA++L+
Sbjct: 180 RMKNCKLQIGGDDQWGNIVSGVDLVNRKSGNKVFGLTLPLITRSDGNKMGKSEKGAVYLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E+ S Y+F+QY+RNI D DV  F    T L   EI+R+A ++G+ +N AK+I+A EIT 
Sbjct: 240 SELYSVYDFYQYFRNIPDLDVKKFLYLFTFLEEEEIERIASVKGQLLNNAKEILAFEITK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG++EA KA++AA   F        +P   +    +   + L+ L+V A   +S +EA
Sbjct: 300 IVHGKDEALKASSAAKAAFKGGDGRADIPFFKLELTNLEESILLVDLMVLAKVVSSKSEA 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + I+   + ++   +   +F   G I+L  GKK  +   L
Sbjct: 360 RRLIDSGGVYIDKVRVGDQNYCLCKDNFI-NGEIELKIGKKKILRIVL 406


>gi|117621106|ref|YP_855114.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|189083640|sp|A0KFT8|SYY_AERHH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|117562513|gb|ABK39461.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 422

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 224/420 (53%), Gaps = 12/420 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG + Q S+P  L    +    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LLDELTRRGLVAQNSDPVALADHLAT-PRTVYCGFDPTAGSLHIGHLVPLLMLRRFQLAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +  S+ +Q  +  +     + +    G    L++N
Sbjct: 65  HTPVALVGGATGLIGDPSFKATERNLNSSETVQGWVASLSAQIKALLPASEGLAAPLLVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVE 186
           N  W+  +  +D LR+IG  FSVN ML  ESVR RL + +Q +SF EF+Y +LQ+ D+  
Sbjct: 125 NADWMGQMSALDFLRDIGKHFSVNAMLVRESVRQRLARPDQGISFTEFSYALLQSQDYAV 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   C LQ+GG+DQWGNI  G+DL  RL   +++ +T PL+T A GTK GKT  GAIW
Sbjct: 185 LNQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVYGMTLPLITKADGTKFGKTEGGAIW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+  +TSPY F+Q+W    D DV  F +  + +P++EI+       + +    A++++A 
Sbjct: 245 LDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMPLTEIEALEAEDAKRQGRKLAQQVLAD 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T +VHG+     A   +   F   +          +    +    +     L+TL+V+
Sbjct: 305 ELTELVHGKGALAAAQRISELLFSGEVARLGESDLAQLAQDGMPGWRIEGETDLVTLLVE 364

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +G A S   AR  L + AI +N  I   E   ++  D     ++ L  GKK + +    G
Sbjct: 365 SGLANSKRIARELLAAGAISLNGEIRREE--PLRAADRLFGRHLLLRRGKKQYRLVTWQG 422


>gi|312897570|ref|ZP_07756987.1| tyrosyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310621203|gb|EFQ04746.1| tyrosyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 418

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 222/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG ++Q+++   L  L  +  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELSWRGAVNQMTDEAGLRKLTQEKSVSLYCGVDPTGDSMHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT +IGDPS R   R++   ++I EN +K+K  F       +  T   ++
Sbjct: 62  GHHPYILIGGGTGVIGDPSGRKTERQLQTVEQIGENAKKLKTQFVHLFGEDSNIT---IV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +  LR+ G  FSVN ML+ + V SRL  E  +SF EF+Y ILQ+ DF  
Sbjct: 119 NNYDWLSKLDLLGFLRDYGKLFSVNVMLAKDVVASRL--EAGISFTEFSYQILQSVDFHH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGA 244
           L K  D ++Q+GG+DQWGNI  GID+  +L+  +   + LT PL+  + GTK GKT  GA
Sbjct: 177 LLKERDVQIQIGGADQWGNITAGIDMIHKLEGSEQEAYGLTIPLMLKSDGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT--LPMSEIDRMAKLQGKEINEAKKII 302
           IWL+ E TSP+ F+Q+W N DDADVV + K  T       E       +  E   A++ +
Sbjct: 237 IWLDPEKTSPFEFYQFWLNQDDADVVRYLKYFTFLGEEEIEELEKTVQEAPEKRLAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEVSRGMGL 352
           A E+T  VHG E  ++A       +  SI              MPT+++  +E +    +
Sbjct: 297 AEEVTIFVHGTEALKEAENITEALYRGSIADLTKRELEQAFGKMPTVTVGPEEKA----V 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V      S  +AR  +++ AI IN   +++ +  ++         I +  GKK + 
Sbjct: 353 VDWLVDTKICPSKRQAREDVQNGAITINGIKVTDLEEIVRPHKNSEGSYIIVRKGKKKYT 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|301067007|ref|YP_003789030.1| tyrosyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439414|gb|ADK19180.1| Tyrosyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 424

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 147/434 (33%), Positives = 220/434 (50%), Gaps = 32/434 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +   L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L
Sbjct: 1   MTD-RGKILDELKWRGALNQLTDEDGLRKLTEEKAVSLYCGTDPTGDSLHVGHLIPFMIL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G 
Sbjct: 60  KRFQLLGHRPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GT 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  +++N  WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ
Sbjct: 116 DDFRIVDNYDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
           + DF+ L K+ D +LQ+GG+DQWGNI  GIDL  R++ P+   + LT+PL+  A GTK G
Sbjct: 174 SVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFG 233

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           K+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L    I     A     E  
Sbjct: 234 KSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKR 293

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM------ 350
           EA++ +A  +T  VHG++  ++A   +   F   +         +S D++ +G       
Sbjct: 294 EAQRELARAVTKFVHGQKAVDQAENISAALFSGDV-------AELSADDIKQGFKQFPTV 346

Query: 351 -------GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
                   ++T +V       S  +AR  +++ AI IN +       ++          +
Sbjct: 347 EAPETAENIVTWLVDTTKIEPSRRQAREDIQNGAITINGTRQRELDFEVDPSTHFDGQYV 406

Query: 403 KLSFGKKNHIICHL 416
            +  GKK + +  +
Sbjct: 407 IVRRGKKRYFLVDI 420


>gi|307941634|ref|ZP_07656989.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307775242|gb|EFO34448.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 426

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 184/413 (44%), Positives = 272/413 (65%), Gaps = 2/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              KS+ L +L ERG ++Q S+   LD   ++G VT Y G+D TA+SLH GHL  LM L 
Sbjct: 13  TPLKSETLQVLLERGLVNQASDLEALDARLAEGPVTVYAGFDATAASLHVGHLMPLMTLR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W+QK GH+PI+++GGGT+ +GDPSFR+E+R ++   +I  N+  I+      +    G  
Sbjct: 73  WMQKLGHRPIAVLGGGTTQVGDPSFRNEARPLLDELKIASNVSGIRRCIERLVSMD-GDD 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            AL+++N  WL   ++++ LR+ GS F+VNRM++FESV+SRL  +  L+ LEF YM+LQA
Sbjct: 132 GALLVDNAEWLTEFRFLEFLRDYGSQFTVNRMVTFESVKSRLDTQSPLTVLEFCYMMLQA 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL++ Y+C +Q+GGSDQWGNI+ GI+LG +    KL  LT PLLTTASG KMGKT 
Sbjct: 192 VDFLELSRRYNCEMQIGGSDQWGNIVNGIELGRKADGRKLHGLTVPLLTTASGAKMGKTA 251

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WL+ E  SP+ FWQ+WRN  DADV  F +  T LPM+E++R++ L+G E+N+AKK+
Sbjct: 252 AGAVWLHPEHLSPFVFWQFWRNTADADVGRFLRLFTELPMNEVERLSALEGHELNDAKKV 311

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +AT++T +VHG EEA KA       F  +      PT  + +  +S G+GLL L+V  GF
Sbjct: 312 LATQVTAIVHGPEEARKALEQGEALFGGAEELLE-PTHVLPRIRLSEGLGLLELLVLVGF 370

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A S  EARR ++   +++N  ++ + + QI   +  +   + L+ GK+   + 
Sbjct: 371 AGSNGEARRLVEGGGVRLNRQVVDDARRQITAGNLQADDRLALAVGKRRKALV 423


>gi|37677009|ref|NP_937405.1| tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320159093|ref|YP_004191471.1| tyrosyl-tRNA synthetase, cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|81755134|sp|Q7MCN7|SYY1_VIBVY RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|37201553|dbj|BAC97375.1| Tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319934405|gb|ADV89268.1| tyrosyl-tRNA synthetase cluster 1 [Vibrio vulnificus MO6-24/O]
          Length = 422

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 231/424 (54%), Gaps = 14/424 (3%)

Query: 4   FKSDFL-SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             S  L   L++RG I Q ++  +L  L  Q   T Y G+D TA SLH GHL  L++L  
Sbjct: 1   MNSQLLFDDLAQRGLIAQTTDLEQLIALFRQ-PQTLYCGFDPTAGSLHIGHLVPLIMLKR 59

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+ I+L+GG T +IGDPSF+   R +  ++ +   +  +       +     +  
Sbjct: 60  FQDAGHQGIALIGGATGMIGDPSFKASERSLNSAETVAAWVNALATQIQQLMTPHLTQ-P 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQA 181
            +M+NN  W+ SI  I   R+IG  FSVN M+  ESV+ RL + +Q +SF EF+Y +LQ+
Sbjct: 119 LVMVNNADWMQSIGVIAFFRDIGKHFSVNAMIQRESVKQRLARPDQGISFTEFSYSLLQS 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF +L + + C LQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT 
Sbjct: 179 YDFAQLNQTHQCALQIGGNDQWGNIVSGIDLTRRLNGTTVHGLTLPLITKSDGTKFGKTE 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
            GAIWL+   TSPY F+Q+W N DDADV  F +  T L + +I+++      ++ +  A+
Sbjct: 239 GGAIWLDAAKTSPYMFYQFWLNCDDADVYRFLRYYTFLSVEQIEQIEATDKAQVGKPSAQ 298

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           +I+A E+T  VHG    E A   +   F   ++  ++  +       +   +++    ++
Sbjct: 299 RILAEEMTRFVHGHAGLESAQRISQALFSGQLNQLNLAELKQLEQDGLPCRQLAHVSDVV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           TL+++ G A+S  +AR  L++ AI+IN    +  +  +            +  GKK   +
Sbjct: 359 TLLLETGLASSKRQAREWLENGAIRINGERWN--EQTLAQTFALYDQYYIVQRGKKQFAM 416

Query: 414 CHLC 417
             L 
Sbjct: 417 VKLA 420


>gi|312132229|ref|YP_003999569.1| tyrosyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908775|gb|ADQ19216.1| tyrosyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 431

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 226/434 (52%), Gaps = 29/434 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG I  I    E     ++ + T YIG+D TA SLH G+L  +M+L   Q  G
Sbjct: 3   FIEELRWRGMIQDIMPGTE--EQLNKEMTTGYIGFDPTARSLHIGNLATIMVLKQFQMAG 60

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T ++GDPS +   R  +  + + EN E IK     F+ +  G+  A ++N
Sbjct: 61  HKPLALVGGATGMVGDPSGKSAERNFLSEETLLENQEGIKKQLEKFLDFNCGENSAEIVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I ++  LRE G + +VN M S +SV+ R+  E  +SF EF+Y ++Q YD+  L
Sbjct: 121 NYDWFKDISFLQFLREAGKYLTVNYMSSKDSVKRRI--ETGISFTEFSYQLIQGYDYYHL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLLTTASGTKMGKTLSG 243
            K    +LQMGGSDQWGNI  G +L  R +        +ALT+PLLT A GTK GK+  G
Sbjct: 179 YKTRGVKLQMGGSDQWGNITTGTELIRRKEGENADYSAYALTTPLLTKADGTKFGKSEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAK---RLTTLPMSEIDRMAKLQGKEINEAKK 300
            +WL+ E+TSPY F+Q+W N +DAD+    +      +    E       Q   +  A+K
Sbjct: 239 NVWLDPELTSPYQFYQFWINQNDADLPRLMRVYCCFLSKEQIEAIEAEHAQAPHLRVAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDM--------------SIHSQHMPTISISKDEV 346
            +A E+TTMVHG +  EKA  A+   F                    + +P   + K ++
Sbjct: 299 ALAKEVTTMVHGADAYEKAVQASEVLFGKSTVEALKNLDEQTFKEVFEGVPQTKVQKSDL 358

Query: 347 SRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +    LL L   +       S  EAR+ L++NA+ +N + I ++KL +   +      I 
Sbjct: 359 TNESNLLELISVLSNGEVYPSKTEARKALQANAVSVNKTKIQDDKLPVNDIELLHGKYIL 418

Query: 404 LSFGKKNHIICHLC 417
           L  GKKNH I  L 
Sbjct: 419 LGKGKKNH-IIELV 431


>gi|258654244|ref|YP_003203400.1| tyrosyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258557469|gb|ACV80411.1| tyrosyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 450

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 137/419 (32%), Positives = 214/419 (51%), Gaps = 11/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG +   ++   L    + G +TAY G+D TA SLH G+L QL++L  LQ+ 
Sbjct: 20  SVLDELRWRGLVALTTDEHALAQALAAGPITAYCGFDPTAPSLHFGNLVQLIVLRHLQRA 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+GG T +IGDP      R +   ++  E +++I+     F+++  G   A+M+
Sbjct: 80  GHRVICLVGGSTGLIGDPRP-TAERVLKTKEQTAEWVDRIQQQVRPFLEFA-GSNPAIMV 137

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LREIG  F VN ML  ++V +RL  ++ +S+ EF+Y +LQ  D++ 
Sbjct: 138 NNLDWTAPMSALDFLREIGKHFRVNTMLRKDAVAARLASDEGISYTEFSYQLLQGMDYLH 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GG DQWGN+  G DL  R     +  L +PL+T + G K GK+   A+W
Sbjct: 198 LFREYGCTLQTGGQDQWGNLTAGTDLIRRATGESVHLLATPLITDSHGQKFGKSEGNAVW 257

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ EMTSPY F+QYW  ++DA V    +  T     EI  + +   Q  +   A++++A 
Sbjct: 258 LSPEMTSPYAFYQYWLGVEDASVGQLLRVFTDRGPDEIADLERQTAQRPQARAAQRVLAG 317

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEV------SRGMGLLTLIV 357
           ++TT+VHG    + A  A+   F     +    PT+  +  E            +  L+V
Sbjct: 318 DVTTLVHGAAATDAAIAASAALFGRGDLASVDEPTLRAALTEAGLHQVSGEVPTVAALLV 377

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   S +EARR +      +NN+ +          +      + L  GK++     L
Sbjct: 378 AAGLVKSLSEARRVVAEGGASVNNARVGEADHVPVADELLHGRYLVLRRGKRSVAGIEL 436


>gi|152995102|ref|YP_001339937.1| tyrosyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150836026|gb|ABR70002.1| tyrosyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 448

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 160/432 (37%), Positives = 226/432 (52%), Gaps = 20/432 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D L+ L  RG I Q++   EL      G  T Y G+D TA SLH GHL  L++L
Sbjct: 15  MTVSSKDLLNDLQARGLIAQMTAEDELKKHLDGGSRTLYCGFDPTADSLHLGHLVPLLVL 74

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH PI+L+GG T +IGDPSF+   R++  S  +    EKI+G  S F+K+    
Sbjct: 75  KRFQDAGHNPIALVGGATGLIGDPSFKAAERQLNTSDVVASWAEKIRGQVSQFVKFDNVP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A ++NN  W   +  +D LR+IG  FSVN M++ ESV+ R  +    +SF EF+Y +L
Sbjct: 135 NPARVVNNLDWAGEMSVLDFLRDIGKHFSVNAMINKESVQQRLNREGAGISFTEFSYALL 194

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  DF EL + YDC LQ+GGSDQWGNI+ GIDL  R    + F LT PL+T + GTK GK
Sbjct: 195 QGMDFAELNRAYDCTLQIGGSDQWGNIVGGIDLSRRQNQSQTFGLTVPLVTKSDGTKFGK 254

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T SGA+WL+   TS Y F+Q+W N  DADV  F K  T L ++EID    A  +     +
Sbjct: 255 TESGAVWLDSSKTSQYAFYQFWMNTADADVYKFLKFFTFLDLAEIDAIEKADKESGGKPQ 314

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEV 346
           A+ I+A E T +VHG E  + A       F              I    +P+ S++  ++
Sbjct: 315 AQAILAREATKLVHGEEGLQAAERITNALFSGEADQLSEQDLEQIQLDGLPSSSLAGIDL 374

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS-IISNEKL----QIKLQDFDSTGN 401
                L +L+  AG A S  + +  L+ +++ +N      N+ +         +      
Sbjct: 375 VE-TPLTSLMADAGLAASGKQVKDALQRDSVFVNGVAKGLNDNMSAADIFTTTNGYFGKY 433

Query: 402 IKLSFGKKNHII 413
             +  GKK H +
Sbjct: 434 FLVKLGKKKHHL 445


>gi|317496029|ref|ZP_07954391.1| tyrosyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913933|gb|EFV35417.1| tyrosyl-tRNA synthetase [Gemella moribillum M424]
          Length = 417

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 136/420 (32%), Positives = 220/420 (52%), Gaps = 14/420 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S+ L  L  R  ++Q ++   +  L     V+ Y G D T  SLH GHL   + L    
Sbjct: 1   MSNLLEELKYRDLVYQQTDEEGIKKLLETESVSIYCGTDPTGDSLHVGHLLPFLTLKRFA 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GHKP+ L+GGGT IIGDPS R E R++   + I EN +K++    +  +   G  +  
Sbjct: 61  KYGHKPVVLVGGGTGIIGDPSGRSEERQLQSLETIAENAKKLENQLRNIFR---GDENIE 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  WL  +  I+ LR+ G   +VN ML+ +SV SRL  E  LSF EF+Y +LQ  D+
Sbjct: 118 FVNNGDWLGKMSMIEFLRDFGKLINVNYMLAKDSVSSRL--ENGLSFTEFSYTLLQGIDY 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSG 243
             L +++  ++Q+GGSDQWGNI  G+++  +L+   + +  T PL+  + GTK GK+  G
Sbjct: 176 AYLNEHHGVKMQLGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N  D D +S  K+ T L   EI+++ +   +   +  A+K 
Sbjct: 236 AVWLDPEKTTPYEFYQFWFNTADNDTISAIKKFTFLEKEEIEKLEESLAKEPHLRLAQKA 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI-----SKDEV-SRGMGLLTL 355
           +A E+  +VHG    E A       F  +I    +  + +      K ++    + ++  
Sbjct: 296 LAEELVKIVHGEAALESALNITKALFSGNIKELTLDELKVAVKGMPKAQLPKDDINIVDF 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V++G  TS  +AR  + + AI IN   +++    +            +  GKKN+ +  
Sbjct: 356 LVESGVVTSKRQAREDVNNGAISINGDKVTDLAFTVDSSSRLEDSFTVVRRGKKNYKLVE 415


>gi|317154791|ref|YP_004122839.1| tyrosyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316945042|gb|ADU64093.1| tyrosyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 427

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 150/426 (35%), Positives = 223/426 (52%), Gaps = 19/426 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I+Q+S+  ++    S      Y G+D TA SLH G+L  L+ L  +++ 
Sbjct: 2   NIYDELKWRGLINQVSDEEKVRTYLSNQGAVMYCGFDPTAESLHVGNLVPLLCLARMKRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GG T +IGDPS +D+ R + R +++    EKIKG    F +  TG    +  
Sbjct: 62  GHNPIFLLGGATGLIGDPSGKDKERELSRREDLDVRSEKIKGQVRRFFERNTGDRPEIT- 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W   +  I+LLR++G +F+VN ML  ESV+ R+ R+   +S+ EF+YMILQ YD+ 
Sbjct: 121 NNYIWTKDLTAIELLRDVGKYFTVNWMLQKESVKGRIDRDDVGISYTEFSYMILQGYDYY 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------TPKLFALTSPLLTTASGTKMGK 239
            L K   CRLQ+GG DQWGNI  G +L  +          ++FALT PL+TTASG K GK
Sbjct: 181 HLFKTKGCRLQLGGGDQWGNITAGCELVRKKCAQEDGEQEEVFALTFPLITTASGKKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +  GAI+LN ++T PY F+Q++ N DD DV+ F K  T L   EI+       +   +  
Sbjct: 241 SEKGAIFLNPDITPPYAFYQFFINTDDRDVIKFLKLFTFLDQDEINALERELAEAPHLRS 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--------SRG 349
           A+K +A E+T MVHG+ E ++   A    F         P    +  E         S  
Sbjct: 301 AQKRLAEEVTRMVHGQPELDRVMAATEALFGEGSLKGVDPATLRAALETAPHCHYAPSNV 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L  +++    A S  +AR+ + S  + IN   +      +   DF     + +  GKK
Sbjct: 361 PDLPQMLLDLQLAASKGQARKDIASGGVYINGERVE-ADQGVAEADFIGGELLIIRKGKK 419

Query: 410 NHIICH 415
           ++ +  
Sbjct: 420 HYGLVT 425


>gi|116052172|ref|YP_788984.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122261320|sp|Q02SV2|SYY_PSEAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115587393|gb|ABJ13408.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 412

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 174/415 (41%), Positives = 255/415 (61%), Gaps = 8/415 (1%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+ 
Sbjct: 4   PTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHIGHLQGLMLMR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++      
Sbjct: 64  WLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD-- 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQA
Sbjct: 122 --SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+ 
Sbjct: 180 YDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKSA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK +
Sbjct: 240 QGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKVV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++   
Sbjct: 300 LANAATALAHGEHAARSAADAARGVFADGTRDSGLPMMKLSRARLAQGLSLTDLLLEHAI 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 360 QPSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGEV----DGLRLSLGKKQHLQLRL 410


>gi|282890555|ref|ZP_06299078.1| hypothetical protein pah_c022o146 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499552|gb|EFB41848.1| hypothetical protein pah_c022o146 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 430

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 144/426 (33%), Positives = 232/426 (54%), Gaps = 16/426 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + + IL ERGFI  +++        +   +  Y G+D TA SLH G++  +M L W Q
Sbjct: 1   MQNVIDILQERGFIEAMTSNNL--KEITSTPLKVYCGFDPTAESLHLGNMVAIMGLAWFQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+++GG T +IGDPS R + R ++    IQ+N+  I+    + +K+ +   + +
Sbjct: 59  RCGHTPIAIVGGATGMIGDPSGRSKERNILDDDSIQKNLYGIRKNIEAVLKHSSKDVELI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W      +D LR++G +F V  ML+ +SV+ RL+ E+ LSF EF+Y +LQ YDF
Sbjct: 119 ILNNYDWFKGFSLVDFLRDVGKYFRVGTMLAKDSVKIRLESEEGLSFTEFSYQLLQGYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L  ++   L+MGGSDQWGNI  G DL  +++   +  LT PLLT + G K GK+  GA
Sbjct: 179 LHLYDHHGVTLEMGGSDQWGNITAGTDLVRKVRGKAVHGLTFPLLTRSDGKKFGKSEQGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKI 301
           IWL+ EM SPY F+QY   + DADV+   K LT + M E    ++M        N A++ 
Sbjct: 239 IWLSSEMLSPYEFYQYLFRVADADVIKLMKILTFMEMDEIRIYEKMMTQSDYVANTAQRK 298

Query: 302 IATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T +VHG E    A          A  A++   ++  +  MP  ++S + +     
Sbjct: 299 LAEEVTRIVHGEEGLRIALKVTEGAAPGAATALDAEVLNNLADDMPNYTVSMENI-LNRR 357

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++ +     S  + R+ +K+  + +NN  I  E   +  +       + ++FGKKN 
Sbjct: 358 LVDVVSEITPERSKGDLRKLIKNGGVYLNNLRIEEENYILTPKALIDGNLMLIAFGKKNK 417

Query: 412 IICHLC 417
           I+  + 
Sbjct: 418 ILVRVS 423


>gi|315226871|ref|ZP_07868659.1| tyrosine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|315121003|gb|EFT84135.1| tyrosine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 471

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 140/428 (32%), Positives = 222/428 (51%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  +  RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+L+  LQ+ 
Sbjct: 45  SVLDEIEWRGLVNQSTDRERLAAALNGDPITFYAGFDPTAASLHIGNLVQLLLMRHLQEA 104

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GG T +IGDP  +   R +     + +  +++K     F+  G G      +
Sbjct: 105 GHHPIAVIGGATGLIGDPR-QSGERVLNPKDVVSQWSQRLKAQVDRFLDAG-GGNPVRFV 162

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  ID LR++G  F +  ML+ + V  RL  E+ +SF EF+Y +LQ  D++ 
Sbjct: 163 NNLDWTESMSVIDFLRDVGKNFRLGTMLAKDVVARRLDSEEGISFTEFSYQVLQGNDYLH 222

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y   LQ GG+DQWGN+  G+DL  +++   +  +T+P++T + G K GK+  GAIW
Sbjct: 223 LFDEYGVTLQTGGADQWGNLTSGLDLIRKVRGTAVNVMTTPIITDSQGKKFGKSEGGAIW 282

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  M SPY  +Q+W N  D  VV   K  T LP  EI R+A          EA+K++A 
Sbjct: 283 LDPTMLSPYRLYQFWFNQPDDQVVKLLKYFTFLPKEEIKRLASQVETNPGAREAQKVLAW 342

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSR------ 348
           E+T+ VHG E A+ A  AA   F     +            +  I ++ D+  R      
Sbjct: 343 EVTSFVHGDEAAQAAIDAAAALFGRGDVTLESIDEQTLESALDGIKVADDKGQRVFAPAQ 402

Query: 349 -GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  ++   VKAG   S +EAR+ + S  + +NN  +++   ++K +DF       +  G
Sbjct: 403 VGERVMEASVKAGLFKSLSEARKAITSGGLYLNNQRVTDINQELKEEDFLHHRFALIRRG 462

Query: 408 KKNHIICH 415
           K+   +  
Sbjct: 463 KRTLGVVE 470


>gi|294787543|ref|ZP_06752796.1| tyrosine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294484899|gb|EFG32534.1| tyrosine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 440

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 140/428 (32%), Positives = 222/428 (51%), Gaps = 21/428 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  +  RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+L+  LQ+ 
Sbjct: 14  SVLDEIEWRGLVNQSTDRERLAAALNGDPITFYAGFDPTAASLHIGNLVQLLLMRHLQEA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GG T +IGDP  +   R +     + +  +++K     F+  G G      +
Sbjct: 74  GHHPIAVIGGATGLIGDPR-QSGERVLNPKDVVSQWSQRLKAQVDRFLDAG-GGNPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  ID LR++G  F +  ML+ + V  RL  E+ +SF EF+Y +LQ  D++ 
Sbjct: 132 NNLDWTESMSVIDFLRDVGKNFRLGTMLAKDVVARRLDSEEGISFTEFSYQVLQGNDYLH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y   LQ GG+DQWGN+  G+DL  +++   +  +T+P++T + G K GK+  GAIW
Sbjct: 192 LFDEYGVTLQTGGADQWGNLTSGLDLIRKVRGTAVNVMTTPIITDSQGKKFGKSEGGAIW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  M SPY  +Q+W N  D  VV   K  T LP  EI R+A          EA+K++A 
Sbjct: 252 LDPTMLSPYRLYQFWFNQPDDQVVKLLKYFTFLPKEEIKRLASQVETNPGAREAQKVLAW 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSR------ 348
           E+T+ VHG E A+ A  AA   F     +            +  I ++ D+  R      
Sbjct: 312 EVTSFVHGDEAAQAAIDAAAALFGRGDVTLESIDEQTLESALDGIKVADDKGQRVFAPAQ 371

Query: 349 -GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  ++   VKAG   S +EAR+ + S  + +NN  +++   ++K +DF       +  G
Sbjct: 372 VGERVMEASVKAGLFKSLSEARKAITSGGLYLNNQRVTDINQELKEEDFLHHRFALIRRG 431

Query: 408 KKNHIICH 415
           K+   +  
Sbjct: 432 KRTLGVVE 439


>gi|312147778|gb|ADQ30437.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 405

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 154/412 (37%), Positives = 239/412 (58%), Gaps = 7/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  LS+L +R F+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L+
Sbjct: 1   MNLALSLLHKRRFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLR 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T   
Sbjct: 61  QHGHMPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSEC 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++N  WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+
Sbjct: 117 FIHNSNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDY 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A 
Sbjct: 235 VYLDSNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S
Sbjct: 295 EITKIVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR + S  + IN   + ++   +  +DF +   ++L  GKK  +   +
Sbjct: 355 KSEGRRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRIVI 405


>gi|107103655|ref|ZP_01367573.1| hypothetical protein PaerPA_01004725 [Pseudomonas aeruginosa PACS2]
          Length = 412

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 174/415 (41%), Positives = 255/415 (61%), Gaps = 8/415 (1%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+ 
Sbjct: 4   PTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLMR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++      
Sbjct: 64  WLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD-- 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQA
Sbjct: 122 --SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+ 
Sbjct: 180 YDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKSA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK +
Sbjct: 240 QGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKVV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++   
Sbjct: 300 LANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHAI 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 360 QPSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGEV----DGLRLSLGKKQHLQLRL 410


>gi|313114152|ref|ZP_07799704.1| tyrosyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623561|gb|EFQ06964.1| tyrosyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 444

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 168/391 (42%), Positives = 245/391 (62%), Gaps = 7/391 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 41  LYEELKARGLVAQITDEEIID-LINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 99

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  G   ALMLN
Sbjct: 100 NKPIALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSEG--KALMLN 157

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 158 NADWLLNLNYVELLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYM 215

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 216 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWL 275

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T
Sbjct: 276 DPNKTSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAYELT 335

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           +MVHG+EEAEKA  AA   F  S    +HMP+  +++ +++ G +G+LTL+VKAG A S 
Sbjct: 336 SMVHGKEEAEKAQNAARALFSGSAMDTEHMPSTQLTEADLTDGSIGILTLMVKAGLAASN 395

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            EARR +    + ++   ++   +    +  
Sbjct: 396 GEARRLVVQGGVLVDGEKVAAPTVGFTAEQL 426


>gi|77361329|ref|YP_340904.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|97201824|sp|Q3II62|SYY1_PSEHT RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|76876240|emb|CAI87462.1| tyrosine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 420

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 230/424 (54%), Gaps = 14/424 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  ++ RG + Q+S+  +L+ L +   V  Y G+D TA SLH GHL  L++L   
Sbjct: 1   MTTQLLEDITHRGLVSQVSDLAQLEQLLATSQV-VYCGFDPTAGSLHIGHLVPLLMLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              GHK ++L+GG T +IGDPSF+   R +   + +Q  +  +     S +         
Sbjct: 60  NDAGHKAVALIGGATGLIGDPSFKATERSLNSKETVQGWVADLSSQVESVMNP-HLSEPI 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
            + NN  W   I+ +D  R++G  FS+N M++ ESV+ RL+  +Q LSF EF+Y +LQ+Y
Sbjct: 119 QLKNNADWFSGIEVLDFFRDVGKHFSINNMINRESVKQRLQRPDQGLSFTEFSYTLLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF +L     C +Q+GG+DQWGNI+ GIDL  RL    ++ LT PL+T + GTK GKT  
Sbjct: 179 DFAKLNSELGCSVQIGGNDQWGNIVSGIDLTRRLNKQTVYGLTLPLITKSDGTKFGKTEG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GAIWL+ + TSPY F+Q+W N DDADV +F +  T L + EI+      +  ++  +A+ 
Sbjct: 239 GAIWLDPKKTSPYRFYQFWLNCDDADVYNFLRFYTFLSVKEIEAIEANDITSQQKPQAQG 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKDEV------SRGMGLL 353
           I+A ++T  VHG +    A       F+  + +  +  +  + +D +         + + 
Sbjct: 299 ILAEQLTRFVHGEQGLASAQRITQLLFNGQVQTLTLAELEQLEQDGLAVHAISDAKINIA 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+VK+  A+S   AR  + +NAIKIN   I++E  Q+    F       +  GKK   +
Sbjct: 359 ELLVKSELASSKRTARELINANAIKINGEAITDEHAQLDFPLF--DRFWVMQRGKKQFRL 416

Query: 414 CHLC 417
             L 
Sbjct: 417 IKLA 420


>gi|291301906|ref|YP_003513184.1| tyrosyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290571126|gb|ADD44091.1| tyrosyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 416

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 139/418 (33%), Positives = 215/418 (51%), Gaps = 14/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I   ++   L      G V  Y+G+D TA+SLH GH TQ++    LQ  
Sbjct: 2   NIFDDLQWRGLIQDATDSDALRAHFEAGPVRFYVGFDPTAASLHVGHFTQVLTARRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDP      R M   + +   +++I+     F+ Y  G   A+++
Sbjct: 62  GHRPLLLVGGATGQIGDPKE-SGERVMNSPEVVAGYLDRIREQMRPFVTYD-GDNAAVLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  F VN+ML+ + V++RL  E  +SF EF Y ++QA D+  
Sbjct: 120 NNLDWTGRMNAIDFLRDVGKHFPVNKMLARDVVKARL--ESGISFTEFAYQLIQANDYYN 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +Q GGSDQWGNI  G+D   R  +  + A  +PL+T A GTK GKT  GA+W
Sbjct: 178 LHQEYGCSVQFGGSDQWGNITAGVDFIRRKGSGPVHAFVTPLVTKADGTKFGKTEGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+ E+T+PY F+Q+W N+DD D+ ++ +R +     EI     A  +      A++ +A 
Sbjct: 238 LDPELTTPYAFYQFWVNVDDRDIGTYLRRFSFKSHDEILELDKATAEKPAARAAQRALAE 297

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------GLLTLIV 357
           E+TT++HG  E  +   A+   F     S+  P+ ++       G+        +  L  
Sbjct: 298 ELTTLLHGETECAQVIAASKALFGRGELSELAPS-TLESALSEAGLVTATDDSPITALFK 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + G   ST+EARR +      +NN  I++   ++   +        L  GKKN     
Sbjct: 357 ETGLTASTSEARRAIADGGAYVNNVRITDVDAKLADVELLHGRFAVLRRGKKNIAGVT 414


>gi|227534079|ref|ZP_03964128.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227188283|gb|EEI68350.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 424

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 147/434 (33%), Positives = 219/434 (50%), Gaps = 32/434 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +   L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L
Sbjct: 1   MTD-RGKILDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMIL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G 
Sbjct: 60  KRFQLLGHRPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GT 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  +++N  WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ
Sbjct: 116 DDFRIVDNYDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
           + DF+ L K+ D +LQ+GG+DQWGNI  GIDL  R++ P+   + LT+PL+  A GTK G
Sbjct: 174 SVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFG 233

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           K+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L    I     A     E  
Sbjct: 234 KSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKR 293

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM------ 350
           EA++ +A  +T  VHG++  ++A   +   F   +         +S D++ +G       
Sbjct: 294 EAQRELARAVTKFVHGQKAVDQAENISAALFSGDV-------AELSADDIKQGFKQFPTV 346

Query: 351 -------GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
                   ++T +V       S   AR  +++ AI IN +       ++          +
Sbjct: 347 EAPETAENIVTWLVDTTKIEPSRRRAREDIQNGAITINGTRQRELDFEVDPSTHFDGQYV 406

Query: 403 KLSFGKKNHIICHL 416
            +  GKK + +  +
Sbjct: 407 IVRRGKKRYFLVDI 420


>gi|170781648|ref|YP_001709980.1| tyrosyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156216|emb|CAQ01358.1| tyrosyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 442

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 139/418 (33%), Positives = 215/418 (51%), Gaps = 12/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D    +  RG++H  ++   L  L S   +T Y G+D TA SLH G+L QL+L+  LQ  
Sbjct: 28  DVWEEIVWRGYVHVSTDQDALKELLSGPPITYYCGFDPTAPSLHLGNLVQLVLMRRLQLA 87

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T +IGDP      R +   + + E + +++   S+F+    G     ++
Sbjct: 88  GHRPLGLVGGSTGLIGDPRP-TAERTLNTPEVVAEWVGRLQAQVSAFLSPE-GDNAVRIV 145

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LRE+G  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ  DF E
Sbjct: 146 NNLDWTAPLSAIDFLREVGKHFRVGTMLKKDAVSARLNSDEGISYTEFSYQILQGLDFRE 205

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G DL  R +     A+ +PL+T + GTK GK+   A+W
Sbjct: 206 LHRAYGCVLQTGGSDQWGNLTSGTDLIRRSERATAHAIGTPLITNSDGTKFGKSEGNAVW 265

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+ E+TSPY F+Q+W N DD DV+   +  T L  + I+ + +         EA++ +A 
Sbjct: 266 LDPELTSPYAFYQFWLNTDDGDVIHRLRVFTFLDRARIEELERAVASEPFRREAQRTLAW 325

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLIVK 358
           E+T++VHG E  E A  AA   F     +             +   E++ G  ++  +V 
Sbjct: 326 EVTSLVHGVEATESAIAAAQALFGQGELAALDEGTLEAVIRELPTAELAPGTTVIQALVD 385

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            G  +S  EARR +    + +NN+  +       + +        L  GKK      +
Sbjct: 386 TGLVSSAGEARRAITQGGVYVNNA--AVTDAAAVVDELLHGRYAVLRRGKKTLAGVTV 441


>gi|27367282|ref|NP_762809.1| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81447202|sp|Q8D5N2|SYY1_VIBVU RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|27358851|gb|AAO07799.1| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 422

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 232/424 (54%), Gaps = 14/424 (3%)

Query: 4   FKSDFL-SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             S  L   L++RG I Q ++  +L  L  Q   T Y G+D TA SLH GHL  L++L  
Sbjct: 1   MNSQLLFDDLAQRGLIAQTTDLEQLIALFRQ-PQTLYCGFDPTAGSLHIGHLVPLIMLKR 59

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+ I+L+GG T +IGDPSF+   R +  ++ +   +  +       +     +  
Sbjct: 60  FQDAGHQGIALIGGATGMIGDPSFKASERSLNSAETVAAWVNALATQIQQLMTPHLTQ-P 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQA 181
            +M+NN  W+ SI  I   R+IG  FSVN M+  ESV+ RL + +Q +SF EF+Y +LQ+
Sbjct: 119 LVMVNNADWMQSIGVIAFFRDIGKHFSVNAMIQRESVKQRLARPDQGISFTEFSYSLLQS 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF +L + + C LQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT 
Sbjct: 179 YDFAQLNQTHQCALQIGGNDQWGNIVSGIDLTRRLNGTNVHGLTLPLITKSDGTKFGKTE 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
            GAIWL+   TSPY F+Q+W N DDADV  F +  T L + +I+++      ++ +  A+
Sbjct: 239 GGAIWLDAAKTSPYMFYQFWLNCDDADVYRFLRYYTFLSVEQIEQLEATDKAQVGKPSAQ 298

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           +I+A E+T  VHG+   E A   +   F   ++  ++  +       +   +++    ++
Sbjct: 299 RILAEEMTRFVHGQAGLESAQRISQALFSGQLNQLNLAELKQLEQDGLPCRQLAHVSDVV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           TL+++ G A+S  +AR  L++ AI+IN       +L +            +  GKK   +
Sbjct: 359 TLLLETGLASSKRQAREWLENGAIRINGERWH--ELTLAQTFALYDQYYIVQRGKKQFAM 416

Query: 414 CHLC 417
             L 
Sbjct: 417 VKLA 420


>gi|297626556|ref|YP_003688319.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922321|emb|CBL56893.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 422

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 135/418 (32%), Positives = 213/418 (50%), Gaps = 18/418 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L+ RGF+   ++   L      G+VT+Y+G+D TA SLH GHL QL+L   LQ
Sbjct: 1   MNALLDDLTWRGFVADSTDRDALAAHLDAGMVTSYVGFDPTARSLHIGHLMQLILARRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P+ L+GG T +IGDP      R M   + +   +  +      ++ +  G+  + 
Sbjct: 61  QAGHRPLLLIGGSTGLIGDPKM-TGERVMNTKETVSAWVASLAEQTKKYVSFE-GENGSR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  +D LR+IG  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ++D+
Sbjct: 119 IVNNLDWTGPLSALDFLRDIGKHFSVNRMLARDVVARRL--EDGISYTEFSYVLLQSFDY 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y C LQ G  DQWGNI  G D   R     +  L +PLLT A GTK GKT  G 
Sbjct: 177 AELHRLYGCTLQTGAQDQWGNITAGADYIRRTTGDIVHGLVTPLLTKADGTKFGKTEGGT 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ E+TSPY F Q+W N +DA V+ + K  +     E+  +A+   Q      A++ +
Sbjct: 237 VWLDPELTSPYAFHQFWLNAEDAKVMDYLKIFSFRSHDELAELAEQTEQAPYKRLAQRAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI-----------HSQHMPTISISKDEVSRGMG 351
           A ++T +VHG E  + A  AA   F                   +    +S  +      
Sbjct: 297 ADDVTDLVHGVEARKAADEAARALFGRGELAALDDATISAVMGEVKATEVSTRDGELP-T 355

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           ++  +  +G   S + ARR ++     +NN+ +++   ++      +     L  GKK
Sbjct: 356 VVDALAASGVVASKSAARRTIQEGGAYVNNAKVTDPDARLSADQLLAGRYAVLRRGKK 413


>gi|296387304|ref|ZP_06876803.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 412

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 174/415 (41%), Positives = 255/415 (61%), Gaps = 8/415 (1%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+ 
Sbjct: 4   PTHQQDLIALLEERGFLHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLMR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++      
Sbjct: 64  WLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD-- 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQA
Sbjct: 122 --SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+ 
Sbjct: 180 YDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKSA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK +
Sbjct: 240 QGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKVV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++   
Sbjct: 300 LANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHAI 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 360 QPSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGEV----DGLRLSLGKKQHLQLRL 410


>gi|308800504|ref|XP_003075033.1| TyrS Tyrosyl-tRNA synthetase, probable (IC) [Ostreococcus tauri]
 gi|119358861|emb|CAL52305.2| TyrS Tyrosyl-tRNA synthetase, probable (IC) [Ostreococcus tauri]
          Length = 488

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 143/424 (33%), Positives = 226/424 (53%), Gaps = 16/424 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L  RG     ++   L     Q  +  Y G+D TA SLH G+L  +++L W Q+ 
Sbjct: 63  DLITTLKARGLFDSCTDETSLAEAL-QKPLKVYCGFDPTADSLHLGNLLGIVVLSWFQRK 121

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  +GDPS + + R ++    +  N+  I       +         ++L
Sbjct: 122 GHRPIILVGGATGRVGDPSGKSQERPLLDEATLSTNVAAISNSVLRILTRAASNPAVVVL 181

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  +I  +D LR++G +  +  MLS +SV+SRL     LSF EF+Y +LQ YDF+ 
Sbjct: 182 DNYDWFRNITLLDFLRDVGKYARLGNMLSKDSVKSRLDGGVGLSFTEFSYQLLQGYDFMH 241

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +N    +Q+GGSDQWGNI  G +L  R+   +  + LT PLL  + GTK GK+ SGAI
Sbjct: 242 LFRNECVSVQIGGSDQWGNITAGTELVRRVLREEGAYGLTFPLLLKSDGTKFGKSASGAI 301

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKII 302
           WL+KE  SPY+F+QY  N  D DV+   + LT L + E   I+      G   N A++I+
Sbjct: 302 WLSKEKLSPYHFYQYLLNTADGDVIRLLRMLTFLSLDEIASIEGSMAEAGYIPNTAQQIL 361

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VHG++  ++A  A       +               +P+++IS+  V   + +
Sbjct: 362 AAEVTRFVHGQDGLDEAIRATESLRPGTETVLDAAALELASDTIPSVAISRVAVVDNL-V 420

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             ++V +G   S   A+R L++  I++NN+ +++E   I   D      + L+ GKKN +
Sbjct: 421 TDVVVVSGLLESKGAAKRMLRNGGIRVNNNKVTDETRTIVEGDIIGDNMLLLAAGKKNKL 480

Query: 413 ICHL 416
           +  L
Sbjct: 481 LIRL 484


>gi|237738790|ref|ZP_04569271.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|294781946|ref|ZP_06747278.1| tyrosine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|229423893|gb|EEO38940.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|294481757|gb|EFG29526.1| tyrosine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 406

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 168/394 (42%), Positives = 242/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  L  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIKELLEKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +  G 
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVETIDHNVECIKKQMQKFIDFSDG- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 120 -KAILENNANWLRNLNYIEFLRDIGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L K Y+C +Q+GG DQW N+I G++L  R    + +A+T  LLT + G KMGKT
Sbjct: 177 GYDFYVLNKKYNCTMQLGGDDQWSNMIAGVELIRRKDRRQAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+   INEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAAINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I +  ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIELGAEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I++ K  +   
Sbjct: 355 ILKTKSEGRRLIEQNGMSLNDEKITDVKFTLNEN 388


>gi|218889577|ref|YP_002438441.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254237022|ref|ZP_04930345.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242823|ref|ZP_04936145.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|254783625|sp|B7V6L2|SYY_PSEA8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126168953|gb|EAZ54464.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126196201|gb|EAZ60264.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218769800|emb|CAW25560.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 412

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 174/415 (41%), Positives = 255/415 (61%), Gaps = 8/415 (1%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+ 
Sbjct: 4   PTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLMR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++      
Sbjct: 64  WLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD-- 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQA
Sbjct: 122 --SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+ 
Sbjct: 180 YDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKSA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK +
Sbjct: 240 QGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKVV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++   
Sbjct: 300 LANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHAI 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 360 QPSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGEV----DGLRLSLGKKQHLHLRL 410


>gi|256394598|ref|YP_003116162.1| tyrosyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360824|gb|ACU74321.1| tyrosyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 420

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 136/420 (32%), Positives = 219/420 (52%), Gaps = 10/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +  L   G +   ++   L    + G V  Y+G+D TA SLH G+L Q++    LQ
Sbjct: 1   MTDIVDDLKWHGLLALSTDEDALRKAFADGPVIFYVGFDPTAPSLHFGNLVQMIAARRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH P+ L+GG T +IGDP   +  R +   + + E + +I+   S FI +  G   A 
Sbjct: 61  EAGHTPLILIGGSTGLIGDPKP-NAERTLNSKETVAEWVVRIRDQVSRFISFE-GPNAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  ID LR+IG  F V +MLS ++V +RL  E  +S+ EF+Y +LQ  D+
Sbjct: 119 VVNNLDWTAPMSAIDFLRDIGKHFRVGKMLSKDAVSARLNSEAGISYTEFSYQVLQGMDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ GGSDQWGNI  G+DL  + +   + AL +PLL  A GTK GKT SG 
Sbjct: 179 LELYRQYGCTLQTGGSDQWGNITAGVDLIHKAEGVSVHALATPLLLKADGTKFGKTESGT 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ ++ +PY F+Q++ N +DA V+S+ K  +     EI+ + +  ++  ++  A+K +
Sbjct: 239 VWLSGDLMTPYAFYQFFLNSEDAMVISYLKVFSFRSREEIEELERLTMEKPQMRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLI 356
           A E+TT+VHG E   +   A+   F     ++   PT+      +   + +  + +  L+
Sbjct: 299 AEEVTTLVHGAEATAQVIAASKALFGQGDLTELDEPTLRAALSELPGTKTAELVPVAQLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S    RR +      +NN  I  E      +D      + L  GK+      +
Sbjct: 359 ADTGLVVSRGAGRRTINEGGAYVNNRKIEAEDEAPTKEDLLHGRWLVLRRGKRTLGAVEV 418


>gi|33519830|ref|NP_878662.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81666781|sp|Q7VR52|SYY_BLOFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33504175|emb|CAD83437.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 422

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 150/417 (35%), Positives = 225/417 (53%), Gaps = 9/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG I QI++ ++L+ + +   +T Y G+D TA SLH GHL  L+ L   QK 
Sbjct: 4   NIIDYLYERGSIAQITDRKKLNAVLNSQPITLYCGFDPTADSLHIGHLAPLLCLKRFQKA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+P+ L+GG T +IGDPSF+D  R++      Q+ I+KIK   + FI       + A +
Sbjct: 64  GHRPLILLGGATGLIGDPSFKDSERKLQSFNTTQKWIKKIKLQIALFIDCNSNNASQAHI 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
           ++N +W  S+  +  LR+IG FFS+N+M++ + ++ R       +S+ EF+Y ++Q+YDF
Sbjct: 124 IDNYSWFSSMNILTFLRDIGKFFSINKMINKDIIKKRLKNDNYGISYTEFSYNLMQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             + K+YD  LQ+GGSDQWGNII GIDL +R+     + LT PLLT  +  K GKT    
Sbjct: 184 AHIYKHYDAILQIGGSDQWGNIISGIDLIKRMYKKNAYGLTVPLLTNFNNIKFGKTEKNT 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+ E TSPY F+QYW NIDD     F K  T + + +I+           +A+ I+A 
Sbjct: 244 IWLDPEKTSPYQFYQYWINIDDKSAYHFLKIFTDISVQDINSFKNRDHSYS-QAQYILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK 358
            +T +VHG+     A   +   F  +I    +          I    +     L   + K
Sbjct: 303 NMTQLVHGKRGLNIAQRISQNLFSYNILKLTLNDFHQLIQDGIPNIILETNTSLQEALTK 362

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  ATS ++AR  +KSNAI IN    S  +   +  D        L  GKKN+ +  
Sbjct: 363 SKLATSRSQARYFIKSNAITINAHKQSKIEYIFQDSDRIYNLYTLLKRGKKNYCLIQ 419


>gi|297243606|ref|ZP_06927537.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888357|gb|EFH27098.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 439

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 134/420 (31%), Positives = 212/420 (50%), Gaps = 19/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E+++      +    G+     +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNSKDIVAGWAERLRKQIGRILPLD-GENPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQGNDFLY 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+   A+W
Sbjct: 192 LFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGASVNVFTSPIITDNQGRKFGKSEGNAMW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA++++A 
Sbjct: 252 LDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREAQRVLAW 311

Query: 305 EITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGM------ 350
           E+T+ VHG +   +A  A+            D       +  + +  ++ S         
Sbjct: 312 EVTSFVHGEDLTSQAIEASSALFGRGNLCNIDEQTLEAALDGVKVKAEDGSLDFAKAKVA 371

Query: 351 -GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++   V AG   + +EARR +++  + +NN  +S     +    F       L  GKK
Sbjct: 372 DRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVSGVDDVLSEDSFLHGRFALLRRGKK 431


>gi|227877944|ref|ZP_03995949.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256849270|ref|ZP_05554703.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047284|ref|ZP_06020242.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381496|ref|ZP_06627491.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312984408|ref|ZP_07791744.1| tyrosine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227862447|gb|EEJ69961.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256714046|gb|EEU29034.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572529|gb|EEX29091.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921966|gb|EFD98973.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310894195|gb|EFQ43281.1| tyrosine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 420

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 146/423 (34%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++      Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDWALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GG T  IGDPS R   R +  +++++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGVTGAIGDPSGRKTERTLQTAEQVKHNEESLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G  F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLSKLNLIDFLRDYGKLFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  +I +  +  I        S +  +    ++
Sbjct: 297 KKLAEEVTKFVHGEAGLEEAKMITDALFSGNIKNLSVAQIEQGLKNAPSAEAGNEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +   ++          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVNGDREQSTDFEVDPSSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|192360287|ref|YP_001981399.1| tyrosyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190686452|gb|ACE84130.1| tyrosyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 435

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 153/436 (35%), Positives = 234/436 (53%), Gaps = 20/436 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  + FL  L ERG I Q++    L    + G  T Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTSIDTHFLQELQERGLIAQMTGGDSLAEHLNTGSRTLYSGFDPTADSLHIGHLVPLLAL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T ++GDPSF+ + R++     +   +++++   S FI +  G 
Sbjct: 61  KRFQMAGHKPIALVGGATGLVGDPSFKAQERKLNTPDVVAGWVQRLQQQVSRFIDFDCGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+ ++  +  LR++G  FSVN M++ ESV+ R++RE + +SF EF YM+L
Sbjct: 121 NSAEVVNNLDWVGNMNVLSFLRDVGKHFSVNNMINKESVKQRIEREGEGISFTEFTYMLL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL +   C LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GK
Sbjct: 181 QSYDFAELYQRRQCTLQIGGSDQWGNITGGIDLTRRLHGGQVFGLTMPLVTKADGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INE 297
           T +G +WL+   TSPY F+Q+W    DADV  F +  T L + EI R+           +
Sbjct: 241 TETGTVWLDPVKTSPYAFYQFWLGAADADVYKFLRYFTFLHLDEIARIEAADVASGVKPQ 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEV 346
           A++I+A ++T +VHG+   E A       F              +    +PT  + + E 
Sbjct: 301 AQRILAEQMTELVHGKSGLEAAQRITQALFSDELSGLSESDFLQLQQDGLPTSRLVRAEF 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN-SIISNEKLQIKL----QDFDSTGN 401
           +  + L+ L+ +A  ATS  + +  L+ +A+ IN  +    + + +              
Sbjct: 361 A-SVSLIQLLTEAQLATSGKQVKDALQRSAVFINGAAKGEADNMDVPGCFAWDTAFYERF 419

Query: 402 IKLSFGKKNHIICHLC 417
             +  GKK   +  + 
Sbjct: 420 YLVKLGKKKCHLFEVV 435


>gi|283769555|ref|ZP_06342451.1| tyrosine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103823|gb|EFC05209.1| tyrosine--tRNA ligase [Bulleidia extructa W1219]
          Length = 437

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 230/418 (55%), Gaps = 14/418 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +FL  L  RG +   ++   L     +   T Y G+D TA SLH GHL Q+MLL   QK 
Sbjct: 2   NFLEELQWRGLVKDYTDLEALQKRL-EKPTTVYCGFDPTADSLHVGHLQQIMLLRRYQKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ ++L GG T +IGDP      R++++ +E+  N+E IK   + FI++  G   A+M+
Sbjct: 61  GHRVLALAGGFTGMIGDPRP-TTERKLLQHEEVLHNVECIKHQLAMFIEFS-GDNAAVMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F++  ML  ++++ R+  +  LS+LEF+Y ILQA DF  
Sbjct: 119 NNNDWLEKMTTLDFLRDFGKQFNIAYMLQKDTIKRRV--DTGLSYLEFSYTILQAIDFYH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YDCR+Q+GGSDQWGN+  G+DL ++      ++F +TSPL+T + G+K GK+    
Sbjct: 177 LFKEYDCRVQIGGSDQWGNLTSGMDLIKKLEGNHTEVFGITSPLITKSDGSKFGKSEGRN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+   TS Y F+Q+W N  D  +V + KRL+     EI+R+A       E  EA+K +
Sbjct: 237 IWLDPNRTSAYEFYQFWLNTPDDSIVDYLKRLSLKTPEEIERLAHLVETEPERREAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIV 357
           A E+TT VHG++  EKA   +   F     S     +        K  V  G+G+L  +V
Sbjct: 297 ACELTTYVHGQKGLEKALRISETLFSGDFMSLSPAELKEGLSDAKKVLVDSGIGILDALV 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG   S + AR+ ++  +I IN   I      +  ++      + L  GK+  I+ +
Sbjct: 357 LAGVCQSKSNARQLIQQGSISINGIKIQAIDGVLVKEEAIDQEFMILKKGKRIIILLN 414


>gi|152985019|ref|YP_001346338.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|189083667|sp|A6UZV3|SYY_PSEA7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|150960177|gb|ABR82202.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 412

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 177/415 (42%), Positives = 253/415 (60%), Gaps = 8/415 (1%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  + D +++L ERGF+HQ ++   L    + G VTAY+G+D TA SLH GHL  LML+ 
Sbjct: 4   PTHQQDLIALLEERGFVHQCTDREGLAAHLAAGPVTAYLGFDATADSLHVGHLQGLMLMR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS ++    G  
Sbjct: 64  WLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILGEAQIQANIDGIVRVFSRYVALDEG-- 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  WL  + Y++ L ++G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQA
Sbjct: 122 --SLVNNAEWLDGVGYLEFLDQVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T  G KMGK+ 
Sbjct: 180 YDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATRDGRKMGKSA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK +
Sbjct: 240 QGAVWLNAERLAPFDFWQFWRNCDDRDVARFLALFSELPMDEVRRLGALQGAELNEAKVV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T + HG + A  AA AA   F        +P + IS++ +++G+ L  L+V    
Sbjct: 300 LANAATALAHGADAARAAADAARGVFADGARDAGLPLVRISRERLAQGLSLTELLVDNAL 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S    RR      ++++   +++    +  +         LS GKK H+   L
Sbjct: 360 QASRGAVRRLAAGGGLRLDGMPVADPDAPLTGE--VDGRR--LSLGKKQHLQLRL 410


>gi|48290318|emb|CAF33979.1| tyrosyl t-RNA synthetase [Enterococcus durans]
          Length = 418

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 212/421 (50%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTSEERLRELVDEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K +D +LQ+GG+DQWGNI  G+DL  +      + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTFDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E TSP+ F+Q+W N DD DVV + K  T L   EI           E  EA++ +
Sbjct: 237 IWLDPEKTSPFEFYQFWLNQDDRDVVKYLKFFTFLTQEEIAELSKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEV-SRGMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+ S    ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITDALFSGNIKELNAAEIAQGFGKMPNVEISSNPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPFDAFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 V 417


>gi|331007993|ref|ZP_08331036.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418199|gb|EGG92822.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 433

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 160/429 (37%), Positives = 238/429 (55%), Gaps = 20/429 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L  RG + QI+     +   ++   T Y G+D TA SLH G L  L+ L   Q  
Sbjct: 6   DLIADLRARGLVAQITREEVFESYLTEEARTLYCGFDPTADSLHIGSLVPLLTLRRFQLA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+ + R++     I+E +EK+K   S FI +  G+  A ++
Sbjct: 66  GHKPLALVGGATGLIGDPSFKAQERKLNTPDVIEEWVEKLKRQISGFIDFECGEASAEVV 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   +  +D LR++G  FS+N M++ ESV+ RL R+ + +SF EF YM+LQ+YDF 
Sbjct: 126 NNLDWTKDLNILDFLRDVGKHFSINNMVNKESVKQRLDRDGEGISFTEFTYMLLQSYDFS 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ+GGSDQWGNI  G+DL  R    ++F LT PL+T + GTK GKT SG I
Sbjct: 186 ELYQRYGCTLQIGGSDQWGNITGGVDLARRQHGGQVFGLTMPLVTKSDGTKFGKTESGTI 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N  DADV +F +  T L ++EI+    A  Q     +A+KI+A
Sbjct: 246 WLDPQKTSPYAFYQFWVNTADADVYTFLRYFTFLDVAEIEAIEEADRQASGRPQAQKILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI-----------HSQHMPTISISKDEVSRGMGL 352
            E+T +VHG +    A       F   +               +PT S+   ++S+ + L
Sbjct: 306 EEVTRLVHGEDSLLAAQRITEALFSGGVDQLNLSDMQQLQQDGLPTTSLEGLDLSKEI-L 364

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE-----KLQIKLQDFDSTGNIKLSFG 407
             L+V +G A +  + +  L  NAI +N   + +E     +    L          +  G
Sbjct: 365 TNLLVSSGVAKNGKQVKDALSRNAIVVNGVPVPSETSVGLEGVFSLASARYARFFVVRLG 424

Query: 408 KKNHIICHL 416
           KKN+ +  L
Sbjct: 425 KKNYHLFTL 433


>gi|15599333|ref|NP_252827.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|81540032|sp|Q9HWP3|SYY1_PSEAE RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|9950343|gb|AAG07525.1|AE004830_6 tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 412

 Score =  335 bits (859), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 174/415 (41%), Positives = 255/415 (61%), Gaps = 8/415 (1%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+ 
Sbjct: 4   PTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLMR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++      
Sbjct: 64  WLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD-- 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQA
Sbjct: 122 --SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+ 
Sbjct: 180 YDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKSA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK +
Sbjct: 240 QGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKVV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++   
Sbjct: 300 LANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHAI 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 360 QPSRSAVRRLAAGGGLRLDGTPVSDPDTPLAGEV----DGLRLSLGKKQHLHLRL 410


>gi|284033307|ref|YP_003383238.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812600|gb|ADB34439.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 433

 Score =  335 bits (859), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 153/430 (35%), Positives = 236/430 (54%), Gaps = 20/430 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            A ++  L  L+ RG I   ++P  L    ++G +T+Y+G+D TA SLH G+L QL+ L 
Sbjct: 6   TASRTQVLDDLASRGLIAHSTDPDALRAAMAEGPITSYVGFDPTAPSLHMGNLLQLLTLR 65

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-K 120
            LQ  GH PI L+GG T +IGDP      R +     +Q+ +E+++G    F+ +     
Sbjct: 66  RLQLAGHNPIGLVGGATGLIGDPKE-SSERVLNPKDVVQQWVERVRGQVERFLDFDEALP 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W   +  +D LR+IG  F VNRML  E V++RL  EQ +S+ EF+Y++LQ
Sbjct: 125 NPARMVNNYDWTKDLNTLDFLRDIGKHFPVNRMLGREVVKARL--EQGISYTEFSYVLLQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           + D++EL + Y C LQ GGSDQWGN+  G++L  R ++ K  AL +PL+T A GTK GKT
Sbjct: 183 SLDYLELYRRYGCTLQTGGSDQWGNLTAGVELIRRTESGKAHALATPLVTKADGTKFGKT 242

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEA 298
            SG +WL++E+TSPY F+Q+W N DD DV+   +  T     EI  + K         EA
Sbjct: 243 ESGTVWLDRELTSPYAFYQFWFNTDDRDVMQLVRYYTFRTAEEIAELEKATADRPHAREA 302

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVS 347
           ++++A ++TT+VHGR+E E+   AA   F  S   +             P   +   ++ 
Sbjct: 303 QRVLAEDVTTLVHGRQETEQVQLAAKALFGQSDLRELDGDTLVAALREAPHTEVPGGQLP 362

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               +  L+V++G   S + ARR +      +NN  +S+ +     +D    G + L  G
Sbjct: 363 ---PVADLLVQSGLVASKSAARRTVAEGGAYLNNEKVSDAEYVPTSEDLLPGGALVLRRG 419

Query: 408 KKNHIICHLC 417
           K++     + 
Sbjct: 420 KRSFAGVLVA 429


>gi|50954390|ref|YP_061678.1| tyrosyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81391211|sp|Q6AGC2|SYY_LEIXX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50950872|gb|AAT88573.1| tyrosyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 442

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 132/412 (32%), Positives = 210/412 (50%), Gaps = 12/412 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG ++  ++   L  L +   +  Y G+D TA SLH G+L QL+ +  LQ  
Sbjct: 23  NVWDELIWRGLVYVSTDEAALKQLLAGEPIAYYCGFDPTAPSLHLGNLVQLLTMRRLQLA 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P  L+GG T +IGDP      R +   + + E +  ++   + F+    G     ++
Sbjct: 83  GHRPFGLVGGSTGLIGDPKP-SAERTLNAKETVAEWVGSLREQVTRFLS-AEGDNAVRLV 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LREIG  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ  D++E
Sbjct: 141 NNLDWTAPLSAIDFLREIGKHFRVGAMLKKDAVAARLNSDEGISYTEFSYQILQGLDYLE 200

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C LQ GGSDQWGN+  G +L  R++     A+ +PL+T + GTK GK+   A+W
Sbjct: 201 LYRQHGCVLQTGGSDQWGNLTSGTELIRRVEGGHAHAVGTPLITNSDGTKFGKSEGNAVW 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+  +TSPY  +Q+W N DDADV++  K  T L   EI+R+ +   +     EA++ +A 
Sbjct: 261 LDPALTSPYAMYQFWLNTDDADVIARLKVFTFLHRDEIERLERAVAEEPFRREAQRRLAL 320

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-------SISKDEVSRGMGLLTLIV 357
           ++T++VHG   AE    A+   F          T         +     + G+ +   +V
Sbjct: 321 DVTSLVHGAAAAEAVIAASEALFGRGGDLAQQDTDTLASALRELPHTVSAPGVAIAQALV 380

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             G   S +EARR +    +  NN+ + +    +        G + L  GKK
Sbjct: 381 DTGLTKSLSEARRAVAQGGVSANNATVQDADAPVGDA-LLPGGMLVLRRGKK 431


>gi|298253918|ref|ZP_06977505.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532061|gb|EFH71036.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 439

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 134/420 (31%), Positives = 212/420 (50%), Gaps = 19/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E+++      +    G+     +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNSKDIVAGWAERLRKQIGQILPLD-GENPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQGNDFLY 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+   A+W
Sbjct: 192 LFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGTSVNVFTSPIITDNQGRKFGKSEGNAMW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA++++A 
Sbjct: 252 LDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREAQRVLAW 311

Query: 305 EITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGM------ 350
           E+T+ VHG +   +A  A+            D       +  + +  ++ S         
Sbjct: 312 EVTSFVHGEDLTNQAIEASSALFGRGDLCNIDEQTLEAALDGVKVKAEDGSLDFAKAKVA 371

Query: 351 -GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++   V AG   + +EARR +++  + +NN  +S     +    F       L  GKK
Sbjct: 372 DRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVSGVDDVLSEGSFLHGRFALLRRGKK 431


>gi|284991447|ref|YP_003410001.1| tyrosyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064692|gb|ADB75630.1| tyrosyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 424

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 139/417 (33%), Positives = 215/417 (51%), Gaps = 13/417 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D +S L  RG I Q ++   L    S G V  Y G+D TA SLH GHL Q  +L  LQ
Sbjct: 1   MTDVISELHRRGLIAQSTDEDALRAHLSAGPVPYYAGFDPTAPSLHVGHLLQFTVLRALQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKT 121
           + GH+P+ L+GG T +IGDP      R++     +   ++ I+   + F++      G  
Sbjct: 61  RAGHRPVVLVGGATGLIGDPRP-TAERQLNDRGTVAGWVDSIRTQVAPFLEVPAEREGLE 119

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
             + ++N  W   +  ID LRE+G  F V RML+ E+V +RL  E  +S+ EF+Y ILQA
Sbjct: 120 APVYVDNLEWTAPLSAIDFLRELGKHFRVGRMLAKEAVAARLNSEAGISYTEFSYQILQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+ EL + +   LQ GGSDQWGN+  GIDL  R +   + AL++PL+T + GTK GK+ 
Sbjct: 180 NDYRELYRRHGVTLQTGGSDQWGNLTAGIDLVRRTEGATVHALSTPLVTKSDGTKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
            G +WL+  +T PY F+Q+W N DDAD  ++    +  P  E++      ++       +
Sbjct: 240 GGTVWLDPALTPPYAFFQFWLNADDADARAWLPLYSERPAEEVEALVAESVERPAARAVQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMG-L 352
           + +A E+T +VHG +E  +A  A    F         P              V  G   +
Sbjct: 300 RALAEELTRLVHGEDELRQAEAAGRALFGRDDLRALGPETLGAALREAGSVTVDGGTPTV 359

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+ + G  +S +EARR +K     +NN  +++ +     +D+   G + L  GK+
Sbjct: 360 AALLQQTGLVSSLSEARRTVKEGGAYLNNERVTDAEAVPGEEDWLPGGWLVLRRGKR 416


>gi|282854550|ref|ZP_06263885.1| tyrosine--tRNA ligase [Propionibacterium acnes J139]
 gi|289426416|ref|ZP_06428159.1| tyrosine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289427762|ref|ZP_06429473.1| tyrosine--tRNA ligase [Propionibacterium acnes J165]
 gi|295130942|ref|YP_003581605.1| tyrosine--tRNA ligase [Propionibacterium acnes SK137]
 gi|282582132|gb|EFB87514.1| tyrosine--tRNA ligase [Propionibacterium acnes J139]
 gi|289153144|gb|EFD01862.1| tyrosine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289159026|gb|EFD07219.1| tyrosine--tRNA ligase [Propionibacterium acnes J165]
 gi|291377292|gb|ADE01147.1| tyrosine--tRNA ligase [Propionibacterium acnes SK137]
          Length = 418

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 142/415 (34%), Positives = 212/415 (51%), Gaps = 14/415 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ
Sbjct: 1   MSDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP+ L+GG T +IGDP      R M   + + E +E IK   S ++    G+  A 
Sbjct: 61  ERGHKPLLLVGGATGLIGDPKM-TGERHMNDREVVAEWVESIKDQVSKYVDTD-GRNAAQ 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W      +DLLR++G  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ+ DF
Sbjct: 119 IVNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRL--ESGISYTEFSYVLLQSLDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG 
Sbjct: 177 YELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGT 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+       +      A+  +
Sbjct: 237 VWVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD--------EVSRGMGLLT 354
           A ++T +VHG E+ + A  AA   F             +S          E      ++ 
Sbjct: 297 ADDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVG 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +V AG   + +  RR +      +NN  +++   ++   DF       +  GKK
Sbjct: 357 AMVAAGVVDTKSAGRRAVAEGGAYLNNVKVADPDQRLTDDDFLCGRVALVRRGKK 411


>gi|124002514|ref|ZP_01687367.1| tyrosyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123992343|gb|EAY31711.1| tyrosyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 450

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 143/437 (32%), Positives = 232/437 (53%), Gaps = 27/437 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +   K +F+  L  RG +H      E     ++ +   YIG+D TA S+H G+L  LM+L
Sbjct: 9   LTKMKKNFIEELRWRGMLHDAMPGTE--EQLNKEMTVGYIGFDPTADSIHIGNLATLMML 66

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GHKP++L+GG T ++GDPS +   R ++  + ++ N   I    + F+ +  G+
Sbjct: 67  KHLQMAGHKPVALVGGATGMVGDPSGKSAERNLLDVKTLRHNEAAIGKQLAKFLDFDCGE 126

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A +LNN  W   + +++ LR++G   ++N M + +SV+ RL  E  LSF EF+Y +LQ
Sbjct: 127 NSAELLNNYDWFGQMNFLEFLRDVGKHLTINYMTAKDSVKKRL--ESGLSFTEFSYQLLQ 184

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L KN +C++QMGGSDQWGNI  G +L  R+     FA+T PL+T   G+K GK+
Sbjct: 185 GYDFFWLNKNKNCKIQMGGSDQWGNITTGTELIRRMGGGNAFAVTCPLITKTDGSKFGKS 244

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + G +WL+ + TSPY F+Q+W N+DD++     +  T L    I++       +    K+
Sbjct: 245 VGGNVWLDPKRTSPYKFYQFWLNVDDSETSKLLRVFTLLDQETIEKHEADYANDPRMLKR 304

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKDEV 346
           I+A E+T MVH +EE ++A  A+   F  S                 + +P  + +K E 
Sbjct: 305 ILAEEVTRMVHSQEELDRAQKASGLLFGKSTLEDFETTDEATLLDVFEGIPKKNYTKAEF 364

Query: 347 SRGMGLLTLIV------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDST 399
                 + LI       +A    S +E RR +K+N IKIN   ++ ++ + K +      
Sbjct: 365 DAFDSTVDLIASAMTEDEAKPV-SKSEVRRLIKNNGIKINQKAVTKDQGESKPEFGLLKD 423

Query: 400 GNIKLSFGKKNHIICHL 416
             + +  GKK + +  +
Sbjct: 424 KFLLIKKGKK-YFLVTV 439


>gi|97537355|sp|O83806|SYY_TREPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 409

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 147/413 (35%), Positives = 222/413 (53%), Gaps = 9/413 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L+ L  RGFI Q ++   L      G +T Y+G D T SSLH GH+  +  L  L 
Sbjct: 1   MNPALARLQARGFIRQCTDLSALSARMDAGPLTFYVGVDPTGSSLHVGHMLPMFALKHLC 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+   L+GGGT+ IGDPS +   R+M+    +      I      F+ +        
Sbjct: 61  DAGHRGCVLIGGGTARIGDPSGKTSMRKMLDYATLDAYAGAIVAQLDHFLSFDHRH--VF 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  WL  + YID LRE+G+ FSVN+ML++E+ + RL  E  LSFLEFNY +LQ+YDF
Sbjct: 119 YVNNRDWLAHLNYIDFLREVGAHFSVNKMLTYEAYKKRL--ETGLSFLEFNYQLLQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L+  Y   LQ+GG DQWGNI+ G DL  R++   +  LT PL+T A G KMGKT  GA
Sbjct: 177 LTLSDRYAVELQIGGDDQWGNIVAGADLVRRVRGKTVHGLTFPLITRADGQKMGKTEQGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + SPY+F+QYWRN  D DV  F    T L + +++ +     + IN AK+++A 
Sbjct: 237 LFLDPALVSPYDFFQYWRNTPDEDVRRFLLLFTFLSVRDVEAIL---TQGINCAKELLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG   A+ A   A   F        +PT  +++  +  G+ +  L V+ G  T+
Sbjct: 294 EVTRLMHGTAVAQVALQGARAAFGGCGDKCALPTFELTQCTLQVGIKVTDLFVQVGLCTT 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ++ARR +      +    +++    I     D  G + +  GKK   +  + 
Sbjct: 354 KSDARRLIAQGGAFVGLQRVADIGAVIDQSALDLDGTVIVRAGKKR--VVRIV 404


>gi|15639820|ref|NP_219270.1| tyrosyl-tRNA synthetase (tyrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026058|ref|YP_001933830.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|3323143|gb|AAC65798.1| tyrosyl-tRNA synthetase (tyrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018633|gb|ACD71251.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060191|gb|ADD72926.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 416

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 147/413 (35%), Positives = 222/413 (53%), Gaps = 9/413 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L+ L  RGFI Q ++   L      G +T Y+G D T SSLH GH+  +  L  L 
Sbjct: 8   MNPALARLQARGFIRQCTDLSALSARMDAGPLTFYVGVDPTGSSLHVGHMLPMFALKHLC 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+   L+GGGT+ IGDPS +   R+M+    +      I      F+ +        
Sbjct: 68  DAGHRGCVLIGGGTARIGDPSGKTSMRKMLDYATLDAYAGAIVAQLDHFLSFDHRH--VF 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  WL  + YID LRE+G+ FSVN+ML++E+ + RL  E  LSFLEFNY +LQ+YDF
Sbjct: 126 YVNNRDWLAHLNYIDFLREVGAHFSVNKMLTYEAYKKRL--ETGLSFLEFNYQLLQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L+  Y   LQ+GG DQWGNI+ G DL  R++   +  LT PL+T A G KMGKT  GA
Sbjct: 184 LTLSDRYAVELQIGGDDQWGNIVAGADLVRRVRGKTVHGLTFPLITRADGQKMGKTEQGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+  + SPY+F+QYWRN  D DV  F    T L + +++ +     + IN AK+++A 
Sbjct: 244 LFLDPALVSPYDFFQYWRNTPDEDVRRFLLLFTFLSVRDVEAIL---TQGINCAKELLAY 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG   A+ A   A   F        +PT  +++  +  G+ +  L V+ G  T+
Sbjct: 301 EVTRLMHGTAVAQVALQGARAAFGGCGDKCALPTFELTQCTLQVGIKVTDLFVQVGLCTT 360

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ++ARR +      +    +++    I     D  G + +  GKK   +  + 
Sbjct: 361 KSDARRLIAQGGAFVGLQRVADIGAVIDQSALDLDGTVIVRAGKKR--VVRIV 411


>gi|254284209|ref|ZP_04959177.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680412|gb|EED36761.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 430

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 219/427 (51%), Gaps = 18/427 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  L +RG I QI+   +L      G  T Y G+D TA SLH G L  L+ L   
Sbjct: 1   MSSALLEDLRDRGLIFQIAGEEQLPDWLDGGPRTLYCGFDPTADSLHIGSLVPLLTLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP++L+GG T +IGDPSF+   R++   Q +    EKI+   S F+ +  G   A
Sbjct: 61  QLAGHKPLALVGGATGLIGDPSFKAAERQLNTPQVVAGWTEKIREQVSRFVDFE-GANAA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAY 182
            ++NN  W  ++  +  LR+IG  FS+N M+  ESV+ RL+RE + +SF EF YMILQ++
Sbjct: 120 EVVNNLDWTGNVDVLSFLRDIGKHFSINAMVQKESVKQRLEREGEGISFTEFTYMILQSF 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + YDC LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T A GTK GKT S
Sbjct: 180 DFSELYQRYDCTLQIGGSDQWGNITGGIDLTRRRFGGQVFGMTLPLVTKADGTKFGKTES 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G IWL+ + TSPY F+Q+W N  DADV  F +  T L + EI     A  + +   E + 
Sbjct: 240 GTIWLDPDRTSPYAFYQFWLNTADADVYRFLRYFTFLSVEEIAAIESADSERQGRPEGQG 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSR---GMG 351
           I+A ++T +VHG      A       F   + +             +   E++       
Sbjct: 300 ILAEQVTALVHGDAGLTAATRITGALFSGEMTALSADDFEQLRLDGLPSSEITAAAMPPT 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----NEKLQIKLQDFDSTGNIKLSF 406
           L  L+ +AG   S  + +  L   A+ IN   +      + +               L  
Sbjct: 360 LTQLLTEAGVVASGKQVKDALGRGAVLINGVSVDAGQNNDPRTCFNPVASLHNRYFLLRL 419

Query: 407 GKKNHII 413
           GKK + +
Sbjct: 420 GKKKYHL 426


>gi|283783150|ref|YP_003373904.1| tyrosine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441835|gb|ADB14301.1| tyrosine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 439

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 135/420 (32%), Positives = 212/420 (50%), Gaps = 19/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ +  LQ  
Sbjct: 14  SLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMRHLQAA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T +IGDP  +   R +     +    E+++      +    G+     +
Sbjct: 74  GHHPIALVGGATGLIGDPR-QSGERTLNSKDIVAGWAERLRKQIGRILPLD-GENPVRFV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ  DF+ 
Sbjct: 132 SNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQGNDFLY 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  NYD  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+   A+W
Sbjct: 192 LFDNYDVTLQLGGSDQWGNLTSGMDLIRKVRGTSVNVFTSPIITDNQGRKFGKSEGNAMW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA++++A 
Sbjct: 252 LDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREAQRVLAW 311

Query: 305 EITTMVHGREEAEKAATAAM--------ECFDMSIHSQHMPTISISKDEVSRGM------ 350
           E+T+ VHG +   +A  A+            D       +  + +  ++ S         
Sbjct: 312 EVTSFVHGEDLTNQAIEASSALFGRGDLCNIDEQTLEAALDGVKVKAEDGSLDFAKAKVA 371

Query: 351 -GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++   V AG   + +EARR +++  + +NN  +S     +    F       L  GKK
Sbjct: 372 DRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVSGVDDVLSEGSFLHGRFALLRRGKK 431


>gi|313904038|ref|ZP_07837418.1| tyrosyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313471187|gb|EFR66509.1| tyrosyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 410

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 163/399 (40%), Positives = 248/399 (62%), Gaps = 7/399 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q+++ +E+  L + G  T YIG+D TA SLH GH   L+L+  LQ  G
Sbjct: 3   LYEELQARGLLAQLTDEKEIAELINAGKATFYIGFDPTADSLHVGHFMALLLMKRLQAAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + I  N+E  K   S FI +G     ALM+N
Sbjct: 63  NKPIALVGGGTAMIGDPSGRSDMRQMMTVETIDHNVECFKKQMSRFIDFGPD--KALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + ++D +R+ GS F+VN ML      +R+  ++ LSFLEF+YM++Q+YDF  L
Sbjct: 121 NGDWLRDLNFLDFMRDYGSQFNVNEMLRARCYVNRM--QEGLSFLEFSYMLMQSYDFYRL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +Y C++Q GG DQW N++ GI+L  +      +A+T  LL    GTKMGKT  GA+WL
Sbjct: 179 YHDYGCQMQFGGDDQWSNMLGGINLIRKKDQKDAYAMTISLLLKHDGTKMGKTAGGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + +  SPY+F+QYWRN+DD+DV+ F + +T LP+ +ID M K +G ++N AK+I+A E+T
Sbjct: 239 DPDKYSPYDFYQYWRNVDDSDVLKFLRMMTFLPLEQIDEMDKWEGAQLNTAKEILAHELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
           T+VHG +EA KA   A   F  S    ++P++ +  ++ +    + +L+++VK     S 
Sbjct: 299 TLVHGEDEAVKAEAGAKAVFLGSGSLDNVPSVELEAEDFNENDEIDILSVLVKTAQCASR 358

Query: 366 NEARRHL-KSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +EARR + K ++I I  + I +    IK  D  + G + 
Sbjct: 359 SEARRAVTKDHSISIGENKIDDFAYAIKKADIPAEGLLI 397


>gi|323356713|ref|YP_004223109.1| tyrosyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273084|dbj|BAJ73229.1| tyrosyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 437

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 136/411 (33%), Positives = 210/411 (51%), Gaps = 12/411 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG IH  ++  EL  L   G +  Y G+D TA SLH G+L QL+ +  LQ  
Sbjct: 23  NVWDELVYRGLIHVSTDETELRDLLGAGPIVFYCGFDPTAPSLHLGNLVQLLTMRRLQLA 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T ++GDP      R +   + + E + +++     F+ +  G + A M+
Sbjct: 83  GHRPLGLVGGSTGLVGDPRP-TAERTLNTRETVAEWVARLRAQVERFLSFE-GDSAARMV 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LREIG  F V  ML  ++V +RL  E  +S+ EF+Y ILQ  D++E
Sbjct: 141 NNLDWTAPLSAIDFLREIGKHFRVGTMLKKDAVSARLNSEAGISYTEFSYQILQGLDYLE 200

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G DL  +++   + A+ +PL+T + GTK GK+   AIW
Sbjct: 201 LYRQYGCVLQTGGSDQWGNLTSGTDLVRKVEGASVHAIGTPLITNSDGTKFGKSEGNAIW 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ +M SP+  +Q+W N DD DV+   K  T L  +EI+  AK          A+K +A 
Sbjct: 261 LDADMCSPWAMYQFWLNTDDRDVIERLKVFTFLTRAEIEEYAKLVETEPFRRAAQKRLAR 320

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLIVK 358
           E+ T VHG E  E    A    F           +       +    ++ G  +L  +  
Sbjct: 321 EVVTTVHGAEATEAVIAATEALFGQGDVKALDAAVLRTALEELPHATLAAGSTVLDALTA 380

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            G + S ++ARR +    + ++   ++++   ++       G   L  GKK
Sbjct: 381 TGLSGSLSDARRAIAQGGVTLDGEKVTSDDAIVEGT--LPGGVSVLRRGKK 429


>gi|311742398|ref|ZP_07716207.1| tyrosine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311314026|gb|EFQ83934.1| tyrosine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 418

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 141/422 (33%), Positives = 216/422 (51%), Gaps = 14/422 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L  L  RG +   ++   L    S G VT Y+G+D TA SLH G+L Q++    LQ
Sbjct: 1   MTHVLDDLVARGLVAHSTDIEALREALSAGPVTYYVGFDPTAPSLHVGNLLQILTARRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P+ L+GG T +IGDP      R M   + + + +++I+   + F+ +  G   A 
Sbjct: 61  LAGHRPLILVGGSTGLIGDPKE-SGERSMNSRETVADWVDRIRAQVTRFVDFD-GDNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  ID LR+IG  F VNRML+ + V SRL  E  +S+ EF+Y++LQ+ D+
Sbjct: 119 VVNNLDWTGQLNTIDFLRDIGKHFPVNRMLARDVVSSRL--ESGISYTEFSYVLLQSLDY 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQ GGSDQWGN+  G++L  R    ++ A  +PL+T A GTK GKT SG 
Sbjct: 177 LELHRRHGCVLQTGGSDQWGNLTAGVELVRRADGDRVHAFATPLITKADGTKFGKTESGT 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKII 302
           IWL+ ++ SPY F Q W   +D+ V  +  + T L +SEID +             ++ +
Sbjct: 237 IWLDPDLMSPYAFHQTWIQAEDSKVGEYLAQFTFLELSEIDALMAEHAEAPGRRVPQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------GLLTL 355
           A E+TT+VHG  EAE A  AA   F        +P  +++      G+        +   
Sbjct: 297 ARELTTIVHGAAEAEAAEHAASALFGKGEL-SDLPEATLAAALTEAGVATVPADASVTDA 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G   S + ARR +      +NN  + +    +      + G   L  GK+      
Sbjct: 356 LVACGLVDSRSAARRTVLEGGAYMNNQRVDDPDAPVADAPRLAGGWTVLRRGKRAVAGVK 415

Query: 416 LC 417
           L 
Sbjct: 416 LA 417


>gi|323341676|ref|ZP_08081909.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464101|gb|EFY09294.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 420

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 141/418 (33%), Positives = 224/418 (53%), Gaps = 15/418 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +FL  L+ RG +  ++N   L+    +  +T Y G+D TA SLH GHL QL+LL   Q
Sbjct: 4   KMNFLEELNWRGLVKDVTNYEALEKRL-EQPITLYCGFDPTADSLHVGHLQQLILLKRYQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKPI+L+GG T +IGDP      R M+   ++Q+N++ I       +          
Sbjct: 63  MQGHKPIALVGGATGMIGDPRP-TTERSMLNDADLQKNVDGIGAQIERILSSD--NNPVT 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  +  +D LR+ G FFSV+ ML+ +++  RL     +SF EF+Y ILQ+ DF
Sbjct: 120 IVNNRDWLGGLTVLDFLRDYGKFFSVSNMLAKDTIAKRL--STGISFTEFSYTILQSIDF 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L KNY   LQ+GGSDQWGN++ G DL  +++ P  ++F +TS L+  + GTK GK+  
Sbjct: 178 LHLYKNYGIELQIGGSDQWGNLVSGADLIRKVEGPEAEVFGITSHLIMKSDGTKFGKSEG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
             IWL++  T  Y+F+Q++ N  D DV+ F KRL+   + EI     + ++   +  A+K
Sbjct: 238 QNIWLDENRTDAYSFYQFFINTSDDDVIDFLKRLSFKSVEEIQAIEASFIKEPHLRLAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTL 355
            +A E+T +V G+E    A       F  ++    +  I       +  EVS    ++ L
Sbjct: 298 ELAKELTEVVFGKEGFAMAERVTNALFSGNVQELTVEQIRQVFADSASIEVSADENIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +V      S  EAR+ ++  AI++N  ++++    I   +        +  GKK + I
Sbjct: 358 LVNTKVCPSKREARQLIEGGAIRVNGEVVNDTDFVISKDNAIGKEVTVIRRGKKTYHI 415


>gi|145343694|ref|XP_001416448.1| Tyrosyl-tRNA synthetase, probable [Ostreococcus lucimarinus
           CCE9901]
 gi|144576673|gb|ABO94741.1| Tyrosyl-tRNA synthetase, probable [Ostreococcus lucimarinus
           CCE9901]
          Length = 484

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 136/427 (31%), Positives = 221/427 (51%), Gaps = 19/427 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++S     L  RG +   +N      +     +  Y G+D TA SLH G+L  +++L W 
Sbjct: 62  YESSVYGELHARGLVEACTNE----SVLEGSSLRVYCGFDPTADSLHIGNLLGIVVLSWF 117

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +K GH P++L+GG T  +GDPS +   R ++    I  N E I       +   +  T  
Sbjct: 118 EKYGHTPVALIGGATGRVGDPSGKSSERPILDETTIAVNAEAISNTIQKILTDNSTDTSL 177

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   + ++D LR++G +  +  ML+ +SV+SRL  E  +SF EF Y +LQ YD
Sbjct: 178 IVVNNVDWYADMSFLDFLRDVGKYSRLGTMLAKDSVKSRLSSESGISFTEFAYQLLQGYD 237

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLS 242
           FV L ++    +Q+GGSDQWGNI  G DL  R   +  +  LT PLL  + GTK GK+  
Sbjct: 238 FVHLLRSQQVSVQVGGSDQWGNITAGTDLIRRLEPSADVSGLTFPLLLKSDGTKFGKSEQ 297

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAK 299
           GAIWL+    SPY F+QY+ N+DDADV+   K LT +P++   E +R        +N  +
Sbjct: 298 GAIWLSTSRLSPYKFYQYFLNVDDADVIRLLKMLTFVPLAEVLEYERHMSQPSYIVNTVQ 357

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRG 349
           + +A E+T  VHG +  E+A  A       +               +P+ ++   +V  G
Sbjct: 358 RRLAEEVTRFVHGVQGLEEAQAATSVLKPGADTDLDVTALTALEGIVPSATLPMQQV-LG 416

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + L+ L V  G   S    +R ++   +++NN  + +++  + + D      + L+ GKK
Sbjct: 417 ISLVQLAVDVGLQPSKGATKRLIQGGGLRLNNIKVLSDEATVSMADIVDGRLLLLAAGKK 476

Query: 410 NHIICHL 416
           N ++  +
Sbjct: 477 NKLLISV 483


>gi|118587440|ref|ZP_01544865.1| tyrosyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432090|gb|EAV38831.1| tyrosyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 439

 Score =  334 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 217/421 (51%), Gaps = 17/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 24  DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 83

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 84  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 139

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 140 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRL--QAGISFTEFTYQILQAIDFYT 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 198 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 257

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+          E  EA++ +
Sbjct: 258 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 317

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG+   E+A   +   F+  + +  +  ++++   V       +   ++ L+
Sbjct: 318 AEEVTKFVHGQTAVEEAEKISRILFNGDVENLTVSQVAVAFSGVPTIEVADQKTDVVELL 377

Query: 357 VKAG-FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           VK      S  +AR  LK+ AI IN   ISN    I   +      I +  GKK + +  
Sbjct: 378 VKDKVIEKSRRQAREDLKNGAITINGEKISNVNGVIDPTEKFDGRFIIIRRGKKKYFLAK 437

Query: 416 L 416
           +
Sbjct: 438 V 438


>gi|332675822|gb|AEE72638.1| tyrosine--tRNA ligase [Propionibacterium acnes 266]
          Length = 418

 Score =  334 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 142/415 (34%), Positives = 212/415 (51%), Gaps = 14/415 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ
Sbjct: 1   MSDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP+ L+GG T +IGDP      R M   + + E +E IK   S ++    G+  A 
Sbjct: 61  ERGHKPLLLVGGATGLIGDPKM-TGERHMNDREVVAEWVESIKDQVSKYVDTD-GRNAAQ 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W      +DLLR++G  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ+ DF
Sbjct: 119 IVNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRL--ESGISYTEFSYVLLQSLDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG 
Sbjct: 177 CELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGT 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+       +      A+  +
Sbjct: 237 VWVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD--------EVSRGMGLLT 354
           A ++T +VHG E+ + A  AA   F             +S          E      ++ 
Sbjct: 297 ADDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVG 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +V AG   + +  RR +      +NN  +++   ++   DF       +  GKK
Sbjct: 357 AMVAAGVVDTKSAGRRAVAEGGAYLNNVKVADPDQRLTDDDFLCGRVALVRRGKK 411


>gi|285808403|gb|ADC35930.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 70]
          Length = 414

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 150/415 (36%), Positives = 233/415 (56%), Gaps = 17/415 (4%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
            ++  +    L  L +   +T YIG+D TASSLH G L  +M L  LQ+ GH PI+++GG
Sbjct: 1   MVYDAT--EGLAELLATQSLTGYIGFDPTASSLHVGSLLTVMGLARLQRCGHTPIAIVGG 58

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
           GT +IGDPS + + R ++ S+ + +N+  ++     F+ +  G   A ++NN  WL +I 
Sbjct: 59  GTGMIGDPSGKSQERVLLSSELLDQNVAGVRAQLERFLDFSAGSHQARLVNNAEWLGAID 118

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +  LR+ G  F+VN ML  ESV  RL+ E  +SF EF+Y++LQAYD+++L   Y C +Q
Sbjct: 119 LLSFLRDAGKHFTVNYMLQKESVSRRLESEDGISFTEFSYLVLQAYDYLQLFDRYGCTVQ 178

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
           MGGSDQWGNI  GIDL  +L+  K   L  PL+ TA+GTK GKT +G +WL+   TSP+ 
Sbjct: 179 MGGSDQWGNITAGIDLIRKLRAKKAHGLVWPLMKTAAGTKFGKTEAGTVWLDAARTSPFK 238

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGRE 314
           F+Q+W N DD+DV+++ K  T L    I+ +        E  EA++++A E+TT+VHG E
Sbjct: 239 FYQFWVNTDDSDVIAYLKFFTFLDRPAIEALEGVTRTAPEKREAQRVLAREVTTLVHGAE 298

Query: 315 EAEKAATAAMECFDMSI----------HSQHMPTISISKDEVS-RGMGLLTLIVK--AGF 361
              +A  A+   F   I              +P+  +S       GM L+ L+       
Sbjct: 299 HVTRAEHASSVLFGEDIATLSADQVLAVFSDVPSSEVSGAAFEGAGMLLVELLADPAVKL 358

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A S +EARR ++S  + +NN   S+ ++++  +         +  G+K + +  L
Sbjct: 359 APSKSEARRLVQSGGVYVNNRRASDVQMRLTREQAIEGVLFVVRKGQKQNHVVRL 413


>gi|326692325|ref|ZP_08229330.1| tyrosyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 415

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 139/420 (33%), Positives = 210/420 (50%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQVTDEEGLLEAMADGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++ EN + I    +       G  D  ++
Sbjct: 62  GGKAVIIVGGATGAIGDPRP-TTERQLLTPEQLAENEKGITAQVTKLF----GDDDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL         K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNDAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N  DADVV + K  T L + EI+    A         A++ +
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQSDADVVKYLKYFTFLSVDEIETLAKAVETSPGDRLAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGM-GLLTLI 356
           A E+T  VHG+   E A   +   F   + +     I      +   +    +  ++  +
Sbjct: 295 AQEVTKFVHGQAAVEDAEKLSAALFSGDVATLSAAQIGDAFGGVPSFDTPNEIKNVVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI IN   +++   ++          + +  GKK + +  +
Sbjct: 355 VDGGVEPSKRQAREDVTNGAITINGEKVTDVAAEVDPSTHYDGQFVLVRRGKKKYFLGKV 414


>gi|295395455|ref|ZP_06805654.1| tyrosine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971777|gb|EFG47653.1| tyrosine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 430

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 141/423 (33%), Positives = 215/423 (50%), Gaps = 22/423 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D  S L +R  + Q ++   L    S+  +  Y+G+D TA SLH G+L Q+++   LQ  
Sbjct: 2   DIFSDLVKRELVAQTTDEDALHKALSEESLKFYVGFDPTAPSLHMGNLVQILVARRLQAA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T +IGDP      R +     ++  +EKI+     F+ +  G   A M+
Sbjct: 62  GHTPYMLVGGATGLIGDPRM-TSERSLNPRDVVEGWVEKIRAQIQPFLDFE-GPNAATMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  +D LR++G  FSVNRML+ E+V +RL  +  +SF EF Y +LQ  D++E
Sbjct: 120 NNYDWTGDISVLDFLRDVGKHFSVNRMLAKEAVSARLNSDAGISFTEFAYQLLQGNDYLE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y   LQ GGSDQWGN+  G DL  R++   + A++  L+T A GTK GKT +G +W
Sbjct: 180 LYRRYGITLQTGGSDQWGNLTSGADLIRRVERTSVHAMSIKLITKADGTKFGKTETGTVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+  +TSPY F Q+W N  DAD   + K  +   + EI+ +     +       +K +A 
Sbjct: 240 LDPTLTSPYAFSQFWLNTADADAPGYLKVFSLRELDEINDIIEQFKEAPHTRLVQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           ++T +VHG+E  ++A  AA   F     ++            +P   I    ++ G+ ++
Sbjct: 300 DVTELVHGKEATDQAFAAADALFGRGELTELDEPTIAGATSALPGTDIDSAALAAGVNVV 359

Query: 354 TLIVKA----GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG---NIKLSF 406
            L V A    G   S  E R+ ++     INN  + +E   +    F   G      L  
Sbjct: 360 DLFVDAFAQTGQLKSKGEVRKAIQQGGAYINNVKVESEDHVMTADQFLPAGDHAVALLRR 419

Query: 407 GKK 409
           GKK
Sbjct: 420 GKK 422


>gi|329898102|ref|ZP_08272308.1| Tyrosyl-tRNA synthetase cluster 1 [gamma proteobacterium IMCC3088]
 gi|328920943|gb|EGG28371.1| Tyrosyl-tRNA synthetase cluster 1 [gamma proteobacterium IMCC3088]
          Length = 433

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 151/434 (34%), Positives = 226/434 (52%), Gaps = 21/434 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  L  L  RG + QI+         ++   T Y G+D TA SLH G L  L++L   
Sbjct: 1   MSNALLEDLKARGLVFQIAGEERFVDWLNEKPRTLYCGFDPTADSLHIGSLVPLLMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI+L+GG T +IGDPSF+   R++     +   ++K+K   S FI +    + A
Sbjct: 61  QEAGHRPIALVGGATGLIGDPSFKATERQLNTPDVVAGWVDKLKAQVSRFIAFDDTASSA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAY 182
           ++ NN  W   +  +  LR+IG  FSVN M+  ESV+ R++RE   +SF EF+Y ILQ+ 
Sbjct: 121 MVANNLDWTQGLDVLTFLRDIGKHFSVNSMIQKESVKQRIEREGSGISFTEFSYSILQSL 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + Y+C LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT S
Sbjct: 181 DFAELYQRYECGLQIGGSDQWGNITGGIDLARRLHGAQVFGLTMPLITKADGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G IWL+   TSPY F+Q+W    DADV  F +  T LP+ +I          +   +A+ 
Sbjct: 241 GTIWLDASKTSPYAFYQFWLGTADADVYKFLRYFTFLPVEQIARIEEEDKTAQGRPQAQA 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRG 349
           ++A E+T +VHG++    A       F  S+               +PT +I++ E+   
Sbjct: 301 VLAEEVTRLVHGQDGLGAALRITEALFSGSLSDLNADDLAQLAQDGLPTTNITRGELPA- 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII-----SNEKLQIKLQDFDSTGNIKL 404
             L  L+       S  +A+  L  +A+ +N + +     +N +         +     +
Sbjct: 360 -TLTQLLSDVEAVASGKQAKDALSRSAVTVNGAALGVDVNANPEAWFPADRALAGKFYLV 418

Query: 405 SFGKKNHIICHLCG 418
             GKK H +  + G
Sbjct: 419 KVGKKKHHLFVISG 432


>gi|170016384|ref|YP_001727303.1| tyrosyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|254783614|sp|B1MW54|SYY_LEUCK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169803241|gb|ACA81859.1| Tyrosyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 415

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 214/420 (50%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++QI++   L    + G V AY+G D TA SLH GHL   M+L   QK 
Sbjct: 2   NFIEDLKWRGALNQITDEAGLLEAMASGKVGAYVGTDPTADSLHLGHLIPFMVLKRFQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++ S+++ EN + I    +       G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRP-TTERQLLSSEQLAENEKGITAQVTKLF----GDNDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGQLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL         K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNEAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N  DADVV + K  T L   EID    A         A++ +
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQGDADVVKYLKYFTFLGSEEIDDLAEAVATNPGERLAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGM-GLLTLI 356
           A E+T  VHG    ++A   +   F  ++ +     I+     +   E +  +  ++  +
Sbjct: 295 AQEVTKFVHGESAVKEAEDLSTALFSGNVATLSAAQIADAFGGVPSFEAANTVKNIVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI IN   +++   +I          + +  GKK + +  +
Sbjct: 355 VDGGVEASKRQAREDVANGAISINGEKVTDVAAEINPLSHYDGQFVLVRRGKKKYFLGKI 414


>gi|189184678|ref|YP_001938463.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|254783621|sp|B3CV32|SYY_ORITI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189181449|dbj|BAG41229.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 413

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 190/411 (46%), Positives = 273/411 (66%), Gaps = 2/411 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F++    RG+ +Q ++   L  + +   + AYIG+D TA SLH G+L Q+M+L  LQ+ G
Sbjct: 3   FINEFINRGYFYQSTDLTRLTQISNSSQIVAYIGFDCTAQSLHVGNLMQIMILRLLQQCG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK I ++GG T+ IGDPS +D+ RR++ + EIQ+NI  IK     FIK+   K D L+LN
Sbjct: 63  HKSIVVIGGATTKIGDPSEKDKLRRIITNDEIQQNISGIKRSLKKFIKFDETKNDVLLLN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL SI YI+ LR+ G  FSVN+ML+  SV+SRL+R   LSFLEFNYM+LQAYDF  L
Sbjct: 123 NQEWLDSINYINFLRDYGRAFSVNKMLTMNSVKSRLERHTPLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y+C LQ+GGSDQWGNI  G+DL ++L   ++F LT+PL+T +SG KMGKT  GA+WL
Sbjct: 183 NKYYNCNLQIGGSDQWGNITMGVDLVKKLSNNEVFGLTTPLITNSSGEKMGKTADGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N++M SPYN++QYWRNI+D DV+ FAK        E+ ++ +L    +NEAKK IA +IT
Sbjct: 243 NEDMCSPYNYFQYWRNIEDNDVIRFAKLYGEFSEVELSKLTELFFNNVNEAKKQIAYKIT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTN 366
            + HGR+EA KA   A++ F+     +++PT +I   + +  G+ +  L+V  G A + +
Sbjct: 303 LLCHGRDEANKALNTAIQMFEHKKADENLPTFTIKDCNNLKVGIPITELLVTIGLAKTKS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E +R ++ N I+INN  ++N  L ++L DF     I +S GKK HI+  + 
Sbjct: 363 EGKRLIQGNGIRINNIKVNNINLVVQLHDFI-DQVITVSLGKKCHILVKIA 412


>gi|254480849|ref|ZP_05094095.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038644|gb|EEB79305.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 431

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 157/432 (36%), Positives = 229/432 (53%), Gaps = 21/432 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  L  RG I QI+   +L      G  T Y G+D TA SLH G L  L++L   
Sbjct: 1   MSSALLEDLRARGLIFQIAGEDDLPAWLDGGPRTLYCGFDPTADSLHIGSLVPLLMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   + FI +  G   A
Sbjct: 61  QLAGHKPLALVGGATGLIGDPSFKTQERQLNTPDIVANWVDKLKAQVARFIDFDAGSVAA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAY 182
            ++NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE   +SF EF YMILQ+Y
Sbjct: 121 EVVNNLDWTEHMDVLTFLRDIGKHFSINAMIQKESVKQRIEREGSGISFTEFTYMILQSY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL K +DC LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +
Sbjct: 181 DFAELNKRHDCTLQLGGSDQWGNITGGIDLTRRLNGNQVFGLTMPLITKSDGTKFGKTEA 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G IWL+   TSPY F+Q+W    DADV  F K  T L ++EI+ + +     +   EA+ 
Sbjct: 241 GTIWLDAAKTSPYAFYQFWLGCSDADVYRFLKYFTFLEVAEINAIEQADAAREGRPEAQA 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI-----------HSQHMPTISISKDEVSRG 349
           ++A E+T +VHG E    A       F  SI               +P   +S+ +    
Sbjct: 301 VLAREVTHLVHGEEGLAAAVRITESLFSGSIEGLAEGDLAQLRQDGLPASHVSRSQFPE- 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQI----KLQDFDSTGNIKL 404
             L  L+ + G A S  + +  L  +A+ IN+  +  +    +    +L +        +
Sbjct: 360 -TLTQLLTEVGMAGSGKQVKDALGRSAVTINSRAVGWDANANVAGCFELSEALYGRYYLV 418

Query: 405 SFGKKNHIICHL 416
             GKK + +  +
Sbjct: 419 KLGKKKYHLFEI 430


>gi|258625613|ref|ZP_05720495.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582115|gb|EEW06982.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 426

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 220/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-KYGTGKTDALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +       T  + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVNDLSQQITHLMASQSENPTSLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+    A        +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADTLRSGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  +S      +     SR   LL L++
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELSQLELDGLPCVAASRTDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLENGAIRVNGERVLQEG--VLSGFALFDRYYVLQRGKKQFALIKLD 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|329769229|ref|ZP_08260648.1| tyrosyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839360|gb|EGF88940.1| tyrosyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 417

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 130/420 (30%), Positives = 213/420 (50%), Gaps = 14/420 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            S  L  L  R  ++Q ++   +  L     V+ Y G D T  SLH GHL   + L    
Sbjct: 1   MSKLLDDLKFRDLVYQQTDEEGIAKLLENESVSIYCGTDPTGDSLHVGHLLPFLTLRRFA 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP+ L+GGGT IIGDPS R E R++   + + EN +K++    +  +   G  +  
Sbjct: 61  QHGHKPVVLVGGGTGIIGDPSGRSEERQLQSLETVAENAKKLENQLRNIFR---GHDNIE 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  WL  +  I+ LR+ G   +VN +L+ +SV SRL  E  LSF EF+Y +LQ  D+
Sbjct: 118 FVNNGDWLGKLSMIEFLRDYGKLINVNYLLAKDSVSSRL--ENGLSFTEFSYALLQGIDY 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSG 243
             L ++++ ++Q+GGSDQWGNI  G+++  +L+   + +  T PL+  + GTK GK+  G
Sbjct: 176 AHLNEHHNVKIQLGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT--LPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N  D+DV+S  K+ T       E    +  +   +  A+K 
Sbjct: 236 AVWLDPEKTTPYEFYQFWFNTADSDVISAIKKFTFLEREEIEKLEESVEKEPHLRLAQKA 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTL 355
           +A E+  +VHG +  E A       F  ++       +      + K E   +   ++  
Sbjct: 296 LAEELVKIVHGEKALESALNITKALFSGNVKELTHDELQEAVKGMPKSEAEKKEYNIVDF 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+     S  +AR  + + AI +N   I++    +  +         L  GKK + +  
Sbjct: 356 LVETKLVQSKRQAREDVNNGAIYVNGDRITDLDYVVGAESRLEDAFTVLRRGKKKYQLVE 415


>gi|224540975|ref|ZP_03681514.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526126|gb|EEF95231.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM
           15897]
          Length = 408

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 137/415 (33%), Positives = 219/415 (52%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG I  +S+   L    + G +T YIG D T  SLH GH +  ++   L+  G
Sbjct: 3   FYDELVWRGLIKDVSSED-LKDKLNAGGMTFYIGTDPTGDSLHIGHFSSFLMSKRLKDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T  IGDP      R M+  +++Q N + +K        +        ++N
Sbjct: 62  HHPILLVGGATGQIGDPKP-TTERPMITKEQVQHNFDCLKKQAEDLFGF-------EVVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR+ G +F++N MLS + ++ RL  ++ ++F EF+YMI+QA DF  L
Sbjct: 114 NLDWSKDINFIDWLRDYGKYFNINYMLSKDIIKRRL--DEGITFTEFSYMIMQAMDFYYL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N  C LQ+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GK+   AIWL
Sbjct: 172 HENKGCDLQVAGQDQWGNITAGIELIRKKTGDEAYGFTMPLLTKSDGTKFGKSEGNAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           ++E TSPY  +Q++ N +D+ V+ + K LT L   EI+    +      + +A K +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDSKVIDYLKYLTFLSKEEIEALEESNKNEPHLRKAHKALAKE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T +HG +  E+A   + + F   I S     +      +   +V+    +L ++VKAG
Sbjct: 292 VITFIHGADAYEEAVNISEKLFSGDIKSMTYEQVKQCFNGVPSIDVTEDEQILNVLVKAG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EAR+ +K  ++ +N   +++EK  +   +        +  GKK + + +
Sbjct: 352 AASSNREARQFVKGGSVLVNGEKVTDEKFVVSKDNAFGGKVTVIRRGKKKYFVIN 406


>gi|332288591|ref|YP_004419443.1| tyrosyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431487|gb|AEC16546.1| tyrosyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 395

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 180/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDI-NQVLAELK-RGVDEVLSEEDLIEKLKENRPLKIKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNTTRPPLTREDVLRNAETYKQQIYKILDP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +WL  +   + +  + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 115 EKTHVVFNSSWLGELGT-EGMIRLASQYTVARMLERDDFKKRFSNHQSIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLVGRELQKARGLKPQVAITLPLLEGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +L   I +++    P + +    +I D  +  +   L+   + EI ++ +    G+   +
Sbjct: 230 SLGNYIGVSEA---PDDMFGKVMSISDELMWRWYDLLSFRSLDEIAQLKQDVANGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H +  A+ A    +E F        MP  +         M +  L+ 
Sbjct: 287 VKILLAKELIERFHDKAAADAAEQTFIERFQKGAMPDEMPEFT-----FEGEMPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A   +ST+EA R +K   +KI+   + + KL I               GK+      +
Sbjct: 342 EADLVSSTSEALRMIKQGGVKIDGEKVEDSKLVISAS------TAVYQVGKRKFAKVTI 394


>gi|313836595|gb|EFS74309.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314928104|gb|EFS91935.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972104|gb|EFT16201.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907926|gb|EGG27686.1| tyrosine--tRNA ligase [Propionibacterium sp. P08]
          Length = 418

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 141/415 (33%), Positives = 215/415 (51%), Gaps = 14/415 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD L  L  RGFI   ++   L    +QG VT Y+G+D TA SLH GHL QLML+  LQ
Sbjct: 1   MSDLLDDLEWRGFIADSTDREALKAEFAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P+ L+GG T +IGDP      RRM   + +   +E IK   S ++    G   A 
Sbjct: 61  ERGHRPLLLVGGATGLIGDPKM-TGERRMNDREVVAGWVESIKDQVSKYVDTD-GPNAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W      ++ LR++G  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ+ DF
Sbjct: 119 IVNNYDWTAEYTALNFLRDVGKHFSVNRMLARDVVARRL--ESGISYTEFSYVLLQSLDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K Y C LQ G  DQWGNI  G +   R     +  L +PLLT A GTK GKT SG 
Sbjct: 177 YELHKRYGCTLQTGAQDQWGNITAGAEFIRRTTGDVVHGLVTPLLTKADGTKYGKTESGT 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A++ +
Sbjct: 237 VWVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEELARRTEEEPWRRAAQRCL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A ++T +VHG ++ + A  AA   F                   +  +  +      ++ 
Sbjct: 297 ADDLTDLVHGVDQRKAAEAAAQAIFGCGELGDLDERTVLSLADELDAAHCDGGEYPTVVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +V AG   + +  +R +      +NN+ ++    ++   DF       +  GKK
Sbjct: 357 AMVAAGVVDTKSAGKRAVTEGGAYLNNAKVTEPDQRLTDDDFLCGRVALVRRGKK 411


>gi|319428541|gb|ADV56615.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 417

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 138/420 (32%), Positives = 213/420 (50%), Gaps = 14/420 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +  +  L  RG I Q ++   +  L        Y G+D TA SLH GHL  L+LL   
Sbjct: 1   MNTTLIEDLECRGLIAQATDINAIKALLCT-PQVVYCGFDPTAGSLHIGHLVPLILLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ I L+GG T +IGDPSF+   R +  +  +   + ++       +     +   
Sbjct: 60  QDAGHRIIVLLGGATGLIGDPSFKAIERSLNSTTTVSNWVNELATQILDLMLPKL-REPL 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
            ++NN  WL  +  I   R++G  FS+N ML+ ESVR RL+  +Q +SF EF+Y +LQ+Y
Sbjct: 119 TLVNNADWLNEVNVITFFRDVGKHFSINNMLNRESVRQRLQRPDQGISFTEFSYSLLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL + + C LQ+GG+DQWGNI+ GID   R     +F LT P++T + GTK GK+ +
Sbjct: 179 DFAELNRRFGCCLQVGGNDQWGNILGGIDFTRRRNGSDVFGLTLPIITKSDGTKFGKSET 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           G +WL+   TSPY F+Q+W N  DADV  F    T +   EI R+       +   +A+ 
Sbjct: 239 GTVWLDAGKTSPYAFYQFWLNTPDADVYRFLHYYTFISCDEIARLQAHDKSSQSKPQAQH 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLT 354
           ++A E+T  VHG      A   +   F   ++   +  I       +   +++ G+ L+ 
Sbjct: 299 VLAEELTRFVHGEAGLASAQRISKALFHGEVNELQLNEIMQLQLDGLPTKQIA-GLNLVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V++G A S   AR  +   AI +N    S  + Q+ L          L  G+K  ++ 
Sbjct: 358 AVVQSGLAISKRAARELIAEGAISVNGKRASTAQCQLGLP--LYEKYWLLQRGRKQFVLL 415


>gi|254226310|ref|ZP_04919901.1| tyrosyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621172|gb|EAZ49515.1| tyrosyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 434

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 222/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +   V  Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFATSQV-LYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSAAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL L++
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDTLLDLLL 372

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 373 SAGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALVKLE 430

Query: 418 G 418
           G
Sbjct: 431 G 431


>gi|50842886|ref|YP_056113.1| tyrosyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|81611507|sp|Q6A7W0|SYY_PROAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50840488|gb|AAT83155.1| tyrosyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 418

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 142/415 (34%), Positives = 212/415 (51%), Gaps = 14/415 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ
Sbjct: 1   MSDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHKP+ L+GG T +IGDP      R M   + + E +E IK   S ++    G+  A 
Sbjct: 61  ERGHKPLLLVGGATGLIGDPKM-TGERHMNDREVVAEWVESIKDQVSKYVDTD-GRNAAQ 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W      +DLLR++G  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ+ DF
Sbjct: 119 IVNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRL--ESGISYTEFSYVLLQSLDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG 
Sbjct: 177 YELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGT 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+       +      A+  +
Sbjct: 237 VWVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD--------EVSRGMGLLT 354
           A ++T +VHG E+ + A  AA   F             +S          E      ++ 
Sbjct: 297 ADDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVG 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +V AG   + +  RR +      +NN  +++   ++   DF       +  GKK
Sbjct: 357 AMVAAGVVDTKSGGRRAVAEGGAYLNNVKVADPDQRLTDDDFLCGRVALVRRGKK 411


>gi|290891415|ref|ZP_06554475.1| hypothetical protein AWRIB429_1865 [Oenococcus oeni AWRIB429]
 gi|290478927|gb|EFD87591.1| hypothetical protein AWRIB429_1865 [Oenococcus oeni AWRIB429]
          Length = 417

 Score =  332 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 216/421 (51%), Gaps = 17/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 2   DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 62  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 118 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRL--QAGISFTEFTYQILQAIDFYT 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 176 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+          E  EA++ +
Sbjct: 236 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG+   E+A   +   F+  + +     ++++   V       +   ++ L+
Sbjct: 296 AEEVTKFVHGQTAVEEAEKISRILFNGDVENLTASQVAVAFSGVPTIEVADQKTDVVELL 355

Query: 357 VKAG-FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           VK      S  +AR  LK+ AI IN   ISN    I   +      I +  GKK + +  
Sbjct: 356 VKDKVIEKSRRQAREDLKNGAITINGEKISNVNGVIDPTEKFDGRFIIIRRGKKKYFLAK 415

Query: 416 L 416
           +
Sbjct: 416 V 416


>gi|119475789|ref|ZP_01616142.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119451992|gb|EAW33225.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 435

 Score =  332 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 139/435 (31%), Positives = 227/435 (52%), Gaps = 20/435 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L  L  RG I Q +  +EL+   +    T Y G+D TA SLH G L  L+ L
Sbjct: 1   MSINGKALLDDLRSRGLIAQATAEQELEDHLTGACRTLYCGFDPTADSLHIGSLVPLLTL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP++L+GG T +IGDPSF+ E R++     + + +EK+K     +I +  G 
Sbjct: 61  RRFQQAGHKPLALVGGATGLIGDPSFKAEERKLNTPDVVSDWVEKLKAQVGRYIDFDCGD 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
           + A ++NN  W+  +  +  LR+IG  F VN+M+  ESV+ R+ R+   +S+ EF+YM+L
Sbjct: 121 SSADVVNNLDWVGEMDVLSFLRDIGKHFPVNQMIKKESVKQRIDRDGDGISYTEFSYMVL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+ DF EL  +  C LQ+GGSDQWGNI  G++L  R    +++ LT PL+T A GTK GK
Sbjct: 181 QSLDFSELFHSRHCTLQIGGSDQWGNITGGVELSRRRFGGQVYGLTLPLVTKADGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           + +G IWL+   TSPY F+Q+W N  DAD   F +  T L + +I        + +    
Sbjct: 241 SETGTIWLDPAKTSPYAFYQFWLNTADADAYRFLRYFTFLSVDQIAGIEQEDAKAEGRPT 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            ++++A E+T +VHG E    A   +   F   +               +P+ ++ + + 
Sbjct: 301 GQRVLAEEVTRLVHGDEGLSAARRISSSLFSGDLSEMSESDFRQLRLDGLPSSTLERSDF 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII-SNEKLQIK----LQDFDSTGN 401
            +G+ L  ++  +G A S  + +  L   ++ IN   + S++ + ++             
Sbjct: 361 -KGLSLTQILTDSGMAASGKQVKDALGRRSVLINGVSVGSDDNMNVEGCLPASRGLHGAY 419

Query: 402 IKLSFGKKNHIICHL 416
             +  GKK + +  +
Sbjct: 420 YLVKLGKKKYHLFEV 434


>gi|254517420|ref|ZP_05129477.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674258|gb|EED30627.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 434

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 149/430 (34%), Positives = 227/430 (52%), Gaps = 17/430 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    S  L+ L +R    QI+   +L    + G  + Y G+D TA SLH G L  L++L
Sbjct: 1   MINMTSALLAELQQRELTFQIAGEDKLPEWLNGGSRSLYCGFDPTADSLHIGSLVPLLML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI+L+GG T +IGDPSF+ + R++   + ++  +EK++G  S F+ +  G 
Sbjct: 61  RRFQLAGHRPIALVGGATGLIGDPSFKAQERQLNTPEVVESWVEKLRGQVSRFVDFDAGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A+++NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE   +SF EF YMIL
Sbjct: 121 QSAVVVNNLEWTRDLDVLTFLRDIGKHFSINTMIQKESVKQRIEREGSGISFTEFTYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL K YDC LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + G+K GK
Sbjct: 181 QSYDFAELYKRYDCGLQLGGSDQWGNITGGIDLTRRMHGGQVYGLTMPLITKSDGSKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           T SG IWL+   TSPY+F+Q+W ++ D+D   F +  T L +++I  + +   +     E
Sbjct: 241 TESGTIWLDAARTSPYSFYQFWLSVADSDAYRFLRYFTFLEVADIAEIERADAERSGRPE 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSR--- 348
           A++I+A E+T +VHG      A       F         P +       +    +     
Sbjct: 301 AQRILAEEVTRLVHGDAGLAAAKRITESLFSGEPEGLSEPDLEQLMLDGLPSSLLPDRGL 360

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTGNIK 403
              L  L+  AG A S  + +  L+ +A+ IN S +                        
Sbjct: 361 PETLTQLLADAGLAASGKQIKDALQRDAVIINGSALGMADNGAVSAVFAADKALYGRFYL 420

Query: 404 LSFGKKNHII 413
           +  GKK + +
Sbjct: 421 VRLGKKKYHL 430


>gi|88704554|ref|ZP_01102267.1| tyrosyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700875|gb|EAQ97981.1| tyrosyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 448

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 151/431 (35%), Positives = 229/431 (53%), Gaps = 21/431 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
               S  L  L +R  I QI+    L      G  + Y G+D TA SLH G L  L++L 
Sbjct: 16  TTMTSALLRELQQRELIFQIAGEDNLPGWLDGGTRSLYCGFDPTADSLHIGSLVPLLMLR 75

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GH+PI+L+GG T +IGDPSF+ + R++     ++  +EK+    S F+ +  G  
Sbjct: 76  RFQLAGHRPIALVGGATGLIGDPSFKAQERQLNTPDIVEAWVEKLSQQVSRFVDFDAGPQ 135

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQ 180
            A+++NN  W  ++  +  LR++G  FS+N M+  ESV+ R++RE   +SF EF YMILQ
Sbjct: 136 SAVVVNNLQWTRNLDVLTFLRDVGKHFSINAMIQKESVKQRIEREGSGISFTEFAYMILQ 195

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF EL + YDC LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T + G+K GKT
Sbjct: 196 SYDFAELYQRYDCGLQLGGSDQWGNITGGIDLTRRLHGGQVYGLTMPLITKSDGSKFGKT 255

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEA 298
            SG IWL+   TSPY+F+Q+W ++ D DV  F +  T LP+ +I  + +   Q     EA
Sbjct: 256 ESGTIWLDAARTSPYSFYQFWLSVADDDVYRFLRYFTFLPVIDIAEIERSDAQRSGRPEA 315

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVS 347
           ++I+A E+T +VHG E    A       F              +    +P+  I + E+ 
Sbjct: 316 QRILAEEVTRLVHGEEGVAAAKRITESLFSGELGGLSEQDLEQLMLDGLPSSVIKEGELP 375

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTGNI 402
               L  L+ +AG A S  + +  L+ +A+ +N   ++             +        
Sbjct: 376 E--TLTQLLTEAGLAASGKQIKDALQRSAVIVNGQSLAMADNAAVGEVFGREQALFGRFH 433

Query: 403 KLSFGKKNHII 413
            +  GKK + +
Sbjct: 434 LVRVGKKKYHL 444


>gi|256825073|ref|YP_003149033.1| tyrosyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688466|gb|ACV06268.1| tyrosyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 442

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 143/408 (35%), Positives = 217/408 (53%), Gaps = 10/408 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L+ L  RG I Q ++  ELD + + G V  YIG+D TA SLH G L QL+ +  LQ+
Sbjct: 24  SGVLAELQWRGVIAQSTDLLELDRMLAAGPVHFYIGFDPTAPSLHVGSLVQLVTMRRLQE 83

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P+ L+GG T +IGDP      R +   + +   ++ I      F+ +  G+  A +
Sbjct: 84  AGHIPVVLVGGSTGLIGDPRP-TSERNLHDRETVARWVDSIAQQVRPFVHFE-GENAATV 141

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR++G  F VN+ML  ++V +RL+  Q +S+ EF+Y ILQ YDF 
Sbjct: 142 VNNLDWFGQLGALDFLRDVGKHFRVNQMLKKDAVSARLESSQGISYTEFSYQILQGYDFW 201

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  +   RLQ+GG DQWGN++ G+D   R++   + ALT+PL+T ASG K GK+   AI
Sbjct: 202 HLFTSLGVRLQVGGQDQWGNLMAGVDYVHRVEGESVHALTTPLVTEASGRKFGKSEGNAI 261

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+  MTSP+ F Q+W N +D  VV + +  T L   +I  + +   +      A++ +A
Sbjct: 262 WLDASMTSPWTFHQFWLNAEDEKVVEYLRLFTLLDREQIAELEREVAEAPFKRTAQRALA 321

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLIV 357
            E+TT+VHG E  +    AA   F      Q         T  ++  EV  G   + ++V
Sbjct: 322 REMTTLVHGAEITDGVEAAAEALFGKGDLQQVDAGVLLDATAELTGGEVEVGTSWVDVVV 381

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             GFA S   A+R L    I +N+  +++ +  I   DF       + 
Sbjct: 382 AVGFADSRKAAKRLLGEGGISVNSQKVTDPEGAITDADFVGGQVAVVK 429


>gi|152967097|ref|YP_001362881.1| tyrosyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189083655|sp|A6WCS8|SYY_KINRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|151361614|gb|ABS04617.1| tyrosyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 422

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 139/414 (33%), Positives = 209/414 (50%), Gaps = 12/414 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D    L  RG +   ++   L      G +T Y+G+D TA+SLH GHL Q++    LQ
Sbjct: 1   MNDVWDELQWRGLVAHSTDEAALQEALQTGPLTYYVGFDPTAASLHVGHLVQVLTAKRLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P+ L+GG T ++GDP      R M     +   +  ++G  + F+ +  G   A 
Sbjct: 61  QAGHRPLILVGGATGLVGDPRP-SAERTMNDPSVVAGWVTGLQGQIAPFLDFD-GPAAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  S+  I+ LR++G  FSVNRML  E+V  RL     +SF EF+Y++LQ+ D+
Sbjct: 119 MVNNLDWTQSMSTIEFLRDVGKHFSVNRMLDREAVSKRLATT-GISFTEFSYVLLQSNDY 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + + C LQ+GGSDQWGNI  G +L  R+    + AL +PLLT A GTK GKT SGA
Sbjct: 178 LQLHRRHGCTLQLGGSDQWGNITAGCELVRRVDQRTVHALATPLLTKADGTKFGKTESGA 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIA 303
           +WL+ E+TSPY F Q+W N +DA VV + K  +  P  EI+ + +         A +   
Sbjct: 238 VWLDPELTSPYAFHQFWLNAEDAKVVDYLKAFSFRPREEIEELGRQAVENPRARAAQRAL 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI--------SKDEVSRGMGLLTL 355
               T +   EEA  A  AA          + +    +        +     R + L  L
Sbjct: 298 AHEVTALVHGEEAAVAVEAAAAALFGGSDLEAIDERILRGALAELPTAAPADRDVRLAQL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
               G A S + ARR +      +NN  +++ +  ++           L  GKK
Sbjct: 358 FADTGLAPSLSGARRTIGEGGAYVNNIKLTDPEATLRDVQLLHGRYAVLRRGKK 411


>gi|290968254|ref|ZP_06559797.1| tyrosine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781736|gb|EFD94321.1| tyrosine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 418

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 145/424 (34%), Positives = 215/424 (50%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q+++   L  L  +  ++ Y G D T  S+H GHL   M+L      
Sbjct: 2   NIIDELTWRGAINQMTDEAGLRKLTEEKKISLYCGVDPTGDSMHIGHLIPFMMLKRFAAA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT  IGDPS R   R++   +++Q N  K++  F+        +     +
Sbjct: 62  GHHPVVLIGGGTGAIGDPSGRKTERQLQTMEKVQANAAKLRAQFAHLF---GEEDRITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +  LR+ G  FSVN ML+ + V SRL  +  +SF EF Y ILQ+ DF  
Sbjct: 119 NNADWLSKIDVLTFLRDYGKLFSVNVMLAKDVVASRL--DAGISFTEFTYQILQSMDFEH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L   Y  +LQ+GG+DQWGNI  G D   ++   T + + LT PL+  A GTK GKT  GA
Sbjct: 177 LFSTYHVQLQIGGADQWGNITAGTDTIRKIHGSTAEAYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E TSP+ F+Q+W N DDADVV + K  T L   EI+    A  +  E   A++ +
Sbjct: 237 VWLDPEKTSPFEFYQFWLNQDDADVVKYLKYFTFLGQEEINALAEAVQKEPEKRAAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+T  VH +E   +A       F  SI             +MPT+ +S  E      +
Sbjct: 297 AEEVTVFVHSKEALAEAQRITEALFHGSIEELSERELLQAFGNMPTVEVSATE----KDV 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V AG  TS  +AR  +   A+ IN   +   +  +          + +  GKK + 
Sbjct: 353 VNWLVDAGIYTSKRQAREDVAHGAVTINGVKVKQAEEIVYPHKNSHGKFVVVRKGKKKYT 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKI 416


>gi|296110850|ref|YP_003621231.1| tyrosine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295832381|gb|ADG40262.1| tyrosine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 415

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 213/420 (50%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEELKWRGALNQVTDEAGLLEAMTNGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++ EN + I    +       G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRP-TTERKLLTQEQLSENEKGITAQVTKLF----GDRDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL       T K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVQLQIGGSDQWGNITSGIDLIHSLEGNTAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N +DADVV + K  T L + EID             +A++ +
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQNDADVVKYLKYFTFLTVEEIDALAKEIDTNPGARQAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG+   ++A   +   F   + +     I+       S D       ++  +
Sbjct: 295 AQEVTKFVHGQTAVDEAEQLSNALFSGDVATLSAAQIADAFGGVPSFDATPESKNVVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI IN   +++   ++          + +  GKK + +  +
Sbjct: 355 VDGGVEQSKRQAREDVTNGAITINGVKVTDVTTEVTPATHYDGKFVLVRRGKKKYFLGKV 414


>gi|300172408|ref|YP_003771573.1| tyrosyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299886786|emb|CBL90754.1| Tyrosyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 415

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 214/420 (50%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++QI++ + L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQITDEKGLLDAMASGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++ EN + I    +       G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRP-TTERQLLTQEQLVENEKGITAQVTKLF----GDNDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL         K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNAAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N +DADVV + K  T L   EID    A        EA++ +
Sbjct: 235 IWLDPEKTSPYTFYQFWLNQNDADVVKYLKYFTFLNSEEIDALAKAIDTNPGAREAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTLI 356
           A E+T  VHG+   + A   +   F   + +     I+     +   ++ +    ++  +
Sbjct: 295 AQEVTKFVHGQAAVDDAEQLSKALFSGDVATLSAAQIADAFGGVPSFDITAESKNIIDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI IN   +++   +I          + +  GKK + +  +
Sbjct: 355 VDGGVDQSKRQAREDVNNGAITINGEKVTDVATEISPSAHYDGKFVLVRRGKKRYFLGKV 414


>gi|258620729|ref|ZP_05715764.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586927|gb|EEW11641.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 426

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 149/421 (35%), Positives = 220/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-KYGTGKTDALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +       T  + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVNDLSQQITHLMASQSENPTSLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNLEFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +     +   +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALCEGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            ++T  VHG E    A       F   +    +  +       +     SR   LL L++
Sbjct: 305 EQVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELRQLELDGLPCVAASRTDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L + A+++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLDNGAVRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|119502753|ref|ZP_01624838.1| Tyrosine--tRNA ligase [marine gamma proteobacterium HTCC2080]
 gi|119461099|gb|EAW42189.1| Tyrosine--tRNA ligase [marine gamma proteobacterium HTCC2080]
          Length = 441

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 151/430 (35%), Positives = 220/430 (51%), Gaps = 22/430 (5%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A  S  LS L  RG I QI+    L         T Y G+D TA SLH G L  L++L  
Sbjct: 11  AMSSALLSDLRARGLIFQIAGEDTLAEWLDAEPRTLYCGFDPTADSLHIGSLVPLLMLRR 70

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+P++L+GG T +IGDPSF+   R +     +   + K++   S FI +  GK  
Sbjct: 71  FQLAGHRPLALVGGATGLIGDPSFKAAERNLNTPDVVANWVSKLQKQVSQFIDFS-GKNS 129

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQA 181
           A ++NN  W   +  +  LR++G +FS+N M+  ESV+ R++RE   +SF EF YMILQ+
Sbjct: 130 AKVVNNLDWTAGMDVLTFLRDVGKYFSINNMIQKESVKQRIEREGSGISFTEFTYMILQS 189

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL + + C LQ+GGSDQWGNI  GIDL  RL   + F LT PL+  A GTK GKT 
Sbjct: 190 YDFSELYRQHQCGLQIGGSDQWGNITGGIDLTRRLHGGQAFGLTMPLVEKADGTKFGKTE 249

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAK 299
           SG IWL+   TSPY+F+Q+W N  D DV  F +  T L          A    +   + +
Sbjct: 250 SGTIWLDAHKTSPYSFYQFWLNTSDTDVYKFLRYFTFLSVEDIAAIEAADATREGRPQGQ 309

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSR 348
           +I+A E+T +VHG E    A       F    ++             +PT +++ + ++ 
Sbjct: 310 QILADEVTKLVHGEEGLAAAQRITQALFVGEAYTLGPDDLEQLALDGLPTTALNAESLAP 369

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----NEKLQIKLQDFDSTGNIK 403
              L  L+   G  TS  + +  LK+ A+ IN   +      +  +  +  +        
Sbjct: 370 --TLTQLLCDVGMVTSGKQVKDALKNKAVFINGVPVDGAPPIDTAVCFQSDNALHGQYWI 427

Query: 404 LSFGKKNHII 413
           +  GKK + +
Sbjct: 428 VRLGKKKYHL 437


>gi|116750003|ref|YP_846690.1| tyrosyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116699067|gb|ABK18255.1| tyrosyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 435

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 179/426 (42%), Positives = 252/426 (59%), Gaps = 23/426 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L+ERGF+ Q S+   L         + YIG+D TA SLH G +  +M L  +Q+ 
Sbjct: 13  NVFDVLNERGFVAQASDVEALRERL-GRPTSCYIGFDPTADSLHIGSMVPIMALAHMQRC 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GGGT ++GDPS + E RRM+ +++I+ N++ +K   S F+++G G   ALML
Sbjct: 72  GHRPLVLVGGGTGLVGDPSGKTEMRRMLTAEQIRGNVDALKAQLSRFLEFGDG--KALML 129

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  ++YI+ LR+IG  FSVNRML+ ES + RL  E  L+F+EFNYM+LQAYDF  
Sbjct: 130 NNADWLLDLRYIEFLRDIGRHFSVNRMLAAESYKMRL--ETGLNFIEFNYMLLQAYDFYH 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           LA+ YDC LQMGG+DQWGNI+ GI+L  R    +  A+T PLLTTASG KMGKT +GA+W
Sbjct: 188 LAEEYDCVLQMGGNDQWGNIVAGIELIRRKSGREAHAITFPLLTTASGAKMGKTAAGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP++++QYW N DD DVV F K  T LP+ EI  +  LQG+E+N AK ++A E 
Sbjct: 248 LSASRTSPFDYYQYWINTDDRDVVRFLKLYTFLPLLEIAAVEGLQGQELNAAKTVLAYEA 307

Query: 307 TTMVHGREEAEKAATAAM-----------------ECFDMSIHSQHMPTISISKDEVSRG 349
           T + HGRE A  A  AA                     D+   +Q +PT  + +  +  G
Sbjct: 308 TLLTHGRENALAACEAASGVFGRRRLAPDLLPSSGIPRDVRDETQAVPTTDVERHRLEEG 367

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +    L  + G   S + ARR ++     +N+  +    L+I +      G I L  GKK
Sbjct: 368 IPAFELFAETGLCESRSAARRLIQQGGAYVNDMRLREFDLRIGVSHLRHDG-ILLKAGKK 426

Query: 410 NHIICH 415
                 
Sbjct: 427 KIHRVR 432


>gi|148284088|ref|YP_001248178.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|189083664|sp|A5CC73|SYY_ORITB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146739527|emb|CAM79245.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 413

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 190/411 (46%), Positives = 275/411 (66%), Gaps = 2/411 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F++    RG+ +Q ++   L  + +   + AYIG+D TA SLH G+L Q+M+L  LQ+ G
Sbjct: 3   FINEFINRGYFYQSTDLTRLTQISNSSQIVAYIGFDCTAQSLHVGNLMQIMILRLLQQCG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK I ++GG T+ IGDPS +D+ RR++ + EIQ+NI  IK     FIK+   K D L+LN
Sbjct: 63  HKSIVVIGGATTKIGDPSEKDKLRRIITNDEIQQNISGIKRSLQKFIKFDETKNDVLLLN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL SI YI+ LR+ G  FSVN+ML+  SV+SRL+R   LSFLEFNYM+LQAYDF  L
Sbjct: 123 NQEWLDSINYINFLRDYGRAFSVNKMLTMNSVKSRLERHTPLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y+C LQ+GGSDQWGNI  G+DL ++L   ++F LT+PL+T +SG KMGKT++GA+WL
Sbjct: 183 NKYYNCNLQIGGSDQWGNITMGVDLVKKLSNNEVFGLTTPLMTNSSGEKMGKTVNGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N++M SPYN++QYW NI+D DV+ FAK        E+ ++ +L    +NEAKK IA +IT
Sbjct: 243 NEDMCSPYNYFQYWGNIEDNDVIRFAKLYGEFSEIELSKLTELLFNNVNEAKKQIAYKIT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTN 366
            + HGR+EA KA   A++ F+     +++PT +I   + +  G+ +  L+V  G A + +
Sbjct: 303 LLCHGRDEANKALNTAIQMFEHKKADENLPTFTIKDCNNLKVGIPITELLVTIGLAKTKS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E +R ++ N I+INN  ++N  L ++LQDF     I +S GKK HI+  + 
Sbjct: 363 EGKRLIQGNGIRINNIKVNNINLVVQLQDFI-GQVITVSLGKKCHILVKIA 412


>gi|41582351|gb|AAS07965.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 463]
          Length = 431

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 158/432 (36%), Positives = 228/432 (52%), Gaps = 21/432 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  L  RG I QI+   +L      G  T Y G+D TA SLH G L  L++L   
Sbjct: 1   MSSALLEDLRARGLIFQIAGEDDLPAWLDGGPRTLYCGFDPTADSLHIGSLVPLLMLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   + FI +  G   A
Sbjct: 61  QLAGHKPLALVGGATGLIGDPSFKTQERQLNTPDIVANWVDKLKAQVARFIDFDAGSVAA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAY 182
            ++NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE   +SF EF YMILQ+Y
Sbjct: 121 EVVNNLDWTEHMDVLTFLRDIGKHFSINAMIQKESVKQRIEREGSGISFTEFTYMILQSY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL K +DC LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +
Sbjct: 181 DFAELNKRHDCTLQLGGSDQWGNITGGIDLTRRLNGNQVFGLTMPLITKSDGTKFGKTEA 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G IWL+   TSPY F+Q+W    DADV  F K  T L +SEI+ + +     +   EA+ 
Sbjct: 241 GTIWLDAAKTSPYAFYQFWLGCSDADVYRFLKYFTFLEVSEINAIEQADAAREGRPEAQA 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI-----------HSQHMPTISISKDEVSRG 349
           ++A E+T +VHG E    A       F  SI               +P   +S+ +    
Sbjct: 301 VLAREVTRLVHGEEGLAAAVRITESLFSGSIEGLAEGDLAQLRQDGLPASHVSRSQFPE- 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQI----KLQDFDSTGNIKL 404
             L  L+ + G A S  + +  L   A+ IN+  +  +    +    +L +        +
Sbjct: 360 -TLTQLLTEVGMAGSGKQVKDALGRCAVTINSRAVGWDANANVAGCFELSEALYGRYYLV 418

Query: 405 SFGKKNHIICHL 416
             GKK + +  +
Sbjct: 419 KLGKKKYHLFEI 430


>gi|261867885|ref|YP_003255807.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413217|gb|ACX82588.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 395

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDMNT-VLAELK-RGVDEILSEQDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQNFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIFKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTRIVFNSDWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
             D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GQDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +L   I +     +P   +    +I D  +  +   L+  P++EI ++ +         +
Sbjct: 230 SLGNYIGVT---DAPSEMFGKIMSISDDLMWDWYNLLSFRPLTEIIQLKEDVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADTAEQEFINRFQKGAMPDDMPEFT-----FEGEIGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R ++   +KI+   + + KL I               GK+      +
Sbjct: 342 DAGLVASTSEANRMVQQGGVKIDGEKVDDAKLIITTS------TAVYQVGKRKFAKVTV 394


>gi|116491773|ref|YP_811317.1| tyrosyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276045|sp|Q04D20|SYY_OENOB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116092498|gb|ABJ57652.1| tyrosyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 417

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 216/421 (51%), Gaps = 17/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 2   DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 62  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 118 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRL--QAGISFTEFTYQILQAIDFYT 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 176 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+          E  EA++ +
Sbjct: 236 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG+   E+A   +   F+  + +     ++++   V       +   ++ L+
Sbjct: 296 AEEVTKFVHGQTAVEEAGKISRILFNGDVENLTASQVAVAFSGVPTIEVADQKTDVVELL 355

Query: 357 VKAG-FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           VK      S  +AR  LK+ AI IN   ISN    I   +      I +  GKK + +  
Sbjct: 356 VKDKVIEKSRRQAREDLKNGAITINGEKISNVNGVIDPTEKFDGRFIIIRRGKKKYFLAK 415

Query: 416 L 416
           +
Sbjct: 416 V 416


>gi|269958403|ref|YP_003328190.1| tyrosyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848232|gb|ACZ48876.1| tyrosyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 414

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 181/416 (43%), Positives = 264/416 (63%), Gaps = 7/416 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +KS+FL +L  RG++HQ +    LD L +   +TAYIG+D TA SLH G L Q+M++ +
Sbjct: 2   EYKSEFLRVLQTRGYLHQCTEAAALDELMALRPITAYIGFDCTARSLHIGSLMQIMVMRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHK + L+GGGT+ IGDPS +D++R M+   EI  N      I ++  K+      
Sbjct: 62  LQKFGHKVVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAG---ILATIEKFLHRDNG 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++++N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+QSLSFLEF+Y++LQ+Y
Sbjct: 119 VIVVDNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQSLSFLEFSYVLLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  
Sbjct: 179 DFVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTHLLLTSTGEKMGKTAY 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++
Sbjct: 239 GAVWLDAAMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG  
Sbjct: 299 ATEATAICHGKSAALAAENAALQVFEHNDDV-GLPNFPLHKSLIAQGISVAKLLQLAGLE 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD-STGNIKLSFGKKNHIICHLC 417
            S +  RR +K    KIN  ++ +    +   DF  + G I +  GKK      + 
Sbjct: 358 ESISAGRRLIKGRGCKINGMVVEDADHALTQADFARNGGYITVFCGKKR--RIKVV 411


>gi|293390253|ref|ZP_06634587.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950787|gb|EFE00906.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 395

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDMNT-VLAELK-RGVDEILSEQDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQNFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTRIVFNSDWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
             D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GQDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +L   I +     +P   +    +I D  +  +   L+  P++EI ++ +         +
Sbjct: 230 SLGNYIGVT---DAPSEMFGKIMSISDDLMWDWYNLLSFRPLTEIIQLKEDVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADTAEQEFINRFQKGAMPDDMPEFT-----FEGEIGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R ++   +KI+   + + KL I               GK+      +
Sbjct: 342 DAGLVASTSEANRMVQQGGVKIDGEKVDDAKLIITTS------TAVYQVGKRKFAKVTV 394


>gi|88855472|ref|ZP_01130136.1| tyrosyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815379|gb|EAR25237.1| tyrosyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 451

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 136/411 (33%), Positives = 215/411 (52%), Gaps = 11/411 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L+ RG +H  ++   L  L     +T Y G+D TA SLH G+L QL+L+  LQ  
Sbjct: 35  SLWDELTWRGLVHVSTDADALKELLEGDPITYYCGFDPTAPSLHLGNLVQLLLMRRLQLA 94

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T +IGDP      R +  ++ + E +  ++   S F+    G     M+
Sbjct: 95  GHRPLGLVGGATGLIGDPRP-TAERTLNDNETVAEWVSYLQAQVSKFLS-AEGDNAVRMV 152

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G +F V  M+  ++V +RL  +  +S+ EF+Y ++Q  DF+E
Sbjct: 153 NNLDWTSPMSAIDFLRDVGKYFRVGTMIKKDAVSARLNSDAGISYTEFSYQVMQGMDFLE 212

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++Y C LQ GGSDQWGN+  G DL  + +   + A+ +PL+T + GTK GK+   A+W
Sbjct: 213 LYRSYGCVLQTGGSDQWGNLTSGTDLIHKAEGASVHAIGTPLITNSDGTKFGKSEGNAVW 272

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+  MTSPY F+Q+W N DDADVV   K  T      I  +           EA+K +A 
Sbjct: 273 LDDAMTSPYAFYQFWLNTDDADVVQRLKIFTFFSRERISELETAVADAPFRREAQKTLAF 332

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLIVK 358
           E+T++VHGR+  E A +A+   F     +             ++  E +    ++ L+V 
Sbjct: 333 EVTSLVHGRDATEAAISASAALFGQGELASLDAETLAAALRELAHVESAGDSTIVQLLVD 392

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
               +S +EARR +    + +NN  +++++  +   D        L  GKK
Sbjct: 393 TKLVSSASEARRAISQGGVYLNNIAVADDQATVG-SDLLPGNVAVLRRGKK 442


>gi|15602620|ref|NP_245692.1| tyrosyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81637009|sp|Q9CMQ8|SYY_PASMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|12721053|gb|AAK02839.1| TyrS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 395

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 106/419 (25%), Positives = 181/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTEINT-VLAELK-RGVDEILSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +   ++  N E  K      +      
Sbjct: 59  RQFQQFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSRDDVLRNAETYKQQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTRIVFNSSWLGELGT-EGMIRLTSNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADIELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   SP   +    +I D  +  +   L+  P++EI   +     G+   +
Sbjct: 230 SLGNYIGVAE---SPTEMFGKVMSISDELMWDWYDLLSFRPLTEIAQLKQEVENGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H   +AE A    +  F      + MP ++         MGL  L+ 
Sbjct: 287 IKVLLAKELIARFHSEADAEAAEQEFINRFQKGAMPEDMPELT-----FEGEMGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +KI+   + + KL IK              GK+      +
Sbjct: 342 EAGLVASTSEANRMVQQGGVKIDGEKVEDAKLVIKAS------TAVYQVGKRKFARVTV 394


>gi|262164083|ref|ZP_06031822.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027611|gb|EEY46277.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 426

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 220/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q ++   L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTSLEALIERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +          + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITHLMTSQSENPAPLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+  R A    +   +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALREGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  +       +     SR   LL L++
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELRQLELDGLPCVAASRTDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 NSGLASSKRQAREWLENGAIRVNGERVLQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|295100837|emb|CBK98382.1| tyrosyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 406

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 164/391 (41%), Positives = 242/391 (61%), Gaps = 7/391 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D + + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   LYEELKARGLVAQITDDEIID-VINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  G   ALMLN
Sbjct: 62  NKPIALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSDG--KALMLN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 120 NADWLLNLNYVELLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYM 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 178 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ D+DV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T
Sbjct: 238 DPNKTSPFEFYQYWRNVGDSDVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAFELT 297

Query: 308 TMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
            MVHG EEA KA  AA   F   +  ++HMP   +++ +++ G +G+LTL+VKAG A S 
Sbjct: 298 KMVHGEEEAAKAQNAARALFSGAAGDAEHMPNTQLTEADLTDGSIGILTLMVKAGLAASN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            EARR +    + ++   ++   +    +  
Sbjct: 358 GEARRLVVQGGVLVDGEKVAAPTVSFTAEQL 388


>gi|223985754|ref|ZP_03635798.1| hypothetical protein HOLDEFILI_03104 [Holdemania filiformis DSM
           12042]
 gi|223962264|gb|EEF66732.1| hypothetical protein HOLDEFILI_03104 [Holdemania filiformis DSM
           12042]
          Length = 429

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 135/413 (32%), Positives = 206/413 (49%), Gaps = 18/413 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  L    + G +T YIG D T  SLH GH +  ++   L+  G
Sbjct: 24  IYEELEWRGLIKDVSSPE-LREKLNAGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKDAG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GGGT +IGDP   D  R M+  +E+  N E +K        +        ++N
Sbjct: 83  HNPILLVGGGTGLIGDPKP-DAERPMVTKEEVNHNYECLKKQAEKVFGF-------EVVN 134

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR+ G +F++N ML+ + VR RL  +  +++ EF+YM++QA DF  L
Sbjct: 135 NYDWYKDINFIDFLRDYGKYFNINYMLNKDIVRRRL--DAGITYTEFSYMLMQAMDFWWL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N  C LQ+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 193 HENKGCTLQVAGQDQWGNITAGIELIRKKTGKEAYGFTMPLLTKSDGTKFGKTNGHAIWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +   TS Y  +Q++ N +D  V+ + K LT L   EI+           + EA K +A E
Sbjct: 253 DINKTSAYEMYQFFINSEDNKVIDYLKFLTFLSREEIEALEEKNRTEPHLREAHKTLAKE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T +HG E    A   A   F  ++    +  +      + +  +     LL ++V  G
Sbjct: 313 VITFIHGEEAYNTAIKIAQTLFGGNLKDLTVEELKQGISDMPRFTIEDKQPLLDVLVATG 372

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            A S  E R  +   +I++N   +++    +   +  +     L  GKKN+ +
Sbjct: 373 IAKSKREGREWIAGGSIQVNGEKVTDPMTPVCRSEAFNQEFTILRKGKKNYFV 425


>gi|238926803|ref|ZP_04658563.1| tyrosine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885335|gb|EEQ48973.1| tyrosine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 400

 Score =  329 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 173/390 (44%), Positives = 248/390 (63%), Gaps = 10/390 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + IL ERGF+ Q ++   L  L     VT Y G+D TA SLHAGHL  LM +  +Q+ 
Sbjct: 2   NAVDILKERGFLAQCTDEAALRNLLDHEQVTFYTGFDPTADSLHAGHLIALMAMSHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT  +GDPS R + R++M  + I  N +  +   S FI +  G   A+M+
Sbjct: 62  GHRPICLVGGGTGTVGDPSGRTDMRKVMTDETIAHNCDCFRAQISHFIDFTDG--RAIMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  + YIDLLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+E
Sbjct: 120 DNGDWLRKLNYIDLLRDVGAHFTVNRMLAAESYKQRW--EKGLTFLEFNYMIMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRL+MGG DQW NII G++L  R K   +F LT+ LLT + G KMGKT  GA+W
Sbjct: 178 LNRRYGCRLEMGGDDQWSNIIAGVELCRRKKNITVFGLTNKLLTKSDGKKMGKTAGGALW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSPY+F+QYWRN+DD DV +    LT LPM E+ R+  ++GKE+N +K+++A E+
Sbjct: 238 LDPKKTSPYDFYQYWRNVDDTDVSTCLSLLTFLPMEEVHRLTAVEGKEMNHSKEVLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG +EA KA   A   F   +  Q      + +  V+ G  L+  + + G  +S  
Sbjct: 298 TKIVHGEQEAHKAQEMARALFGGGVSEQ------VPQLHVTCGEKLIDALTREGVFSSKG 351

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           EARR ++   + +N + IS+E   ++  DF
Sbjct: 352 EARRLIQQGGVTLNETRISDEHYVLQEDDF 381


>gi|256848567|ref|ZP_05554008.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714619|gb|EEU29599.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 417

 Score =  329 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 151/424 (35%), Positives = 228/424 (53%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q+++   L  L ++  ++ Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIVDELKWRGAVNQVTDEDGLRELTNEKQISLYCGTDPTGDSLHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R +    +++ N + +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKTERTLQTESQLEHNKKALTEQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TWL  I  I+ LR+ G  F+VN ML+ E V SRL  +  +SF EF Y ILQA DF+ 
Sbjct: 118 DNYTWLSKISMIEFLRDYGKLFNVNTMLNKEVVASRL--DNGISFTEFTYQILQAVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +N D +LQ+GGSDQWGNI  GIDL  +++ P  K+F LT PL+  A GTK GKT  GA
Sbjct: 176 LYRNNDVQLQIGGSDQWGNITSGIDLIHKVEGPETKVFGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ + TSPY F+Q+W N DD DVV + K  T L   +I+ +A+   KE    EA++ +
Sbjct: 236 VWLDPKKTSPYEFYQFWLNQDDRDVVKYLKYFTFLDQDQINDLAEKVEKEPWKREAQRTL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E+TT VHG    + A   +   F   I            +  P++ IS D V     +
Sbjct: 296 AREVTTFVHGEAATKHAEEISQLLFKGDIKDLTTEDIEQAFKSAPSVDISADVV----NI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V      S  +AR  +K+ AI +N   +++ + +I   D      + +  GKK++ 
Sbjct: 352 VDWLVNTNIEPSKRQAREDVKNGAITVNGEKVTDIEAEINPADHFDGKYVVVRRGKKHYT 411

Query: 413 ICHL 416
           +  +
Sbjct: 412 LAKV 415


>gi|315499743|ref|YP_004088546.1| tyrosyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417755|gb|ADU14395.1| tyrosyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 440

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 208/419 (49%), Positives = 277/419 (66%), Gaps = 9/419 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +FKSDFL++LSERGFIHQ ++   LD L S G +T YIGYD TASSLHAGHL Q+MLL
Sbjct: 25  MTSFKSDFLNVLSERGFIHQCTDAEALDTLASAGPITGYIGYDATASSLHAGHLVQIMLL 84

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTG+KPI LMGGGT+ +GDP+F+D  R ++  ++IQ N+  IK +F+SF+ +G G 
Sbjct: 85  YWLQKTGNKPIVLMGGGTTKVGDPTFKDTQRPLLTDEQIQSNMNGIKSVFNSFLTFGDGA 144

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL    YI+ LR  G+ F++NRML+F+SV+ RL+REQ ++FLEFNYM++Q
Sbjct: 145 TDAIMVNNDDWLSGFGYIEFLRTFGTHFTINRMLTFDSVKLRLEREQPMTFLEFNYMLMQ 204

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF EL   Y+C LQMGGSDQWGNI+ G++L  RL     F LT+PLLTTASG KMGKT
Sbjct: 205 AVDFRELNSTYNCVLQMGGSDQWGNIVNGVELTRRLNQKAAFGLTTPLLTTASGAKMGKT 264

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +  SPY++WQYWRN +DADV  F +  T LPM EI R+  LQG EINEAKK
Sbjct: 265 VGGAVWLNADALSPYDYWQYWRNTEDADVGKFMRLFTDLPMDEIRRLEALQGAEINEAKK 324

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----LTLI 356
           I+A   T MVHG   A  A   A + F+           ++ + +  +G          +
Sbjct: 325 ILADAATRMVHGEAAAATARDTAQKAFEQGTRLVS----NVVEMDWQQGQEFTYRTPEAL 380

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               F  S  +A+R + +N IKIN    + +KL  + +         L  GKK  ++  
Sbjct: 381 AAKAFNLSIKDAKRSIANNEIKINGEHPATDKLYKRSEVNAEDAAFVLQRGKKT-VLVK 438


>gi|220935571|ref|YP_002514470.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996881|gb|ACL73483.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 400

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 185/421 (43%), Gaps = 26/421 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           MP F SD L  L  RG  H+I    EL      G  +    G+D TA  LH GH   L  
Sbjct: 1   MPGF-SDQLD-LIRRGS-HEILLEDELKQRLESGRPLRIKAGFDPTAPDLHLGHTVLLNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+ I L+G  T +IGDP+ +  +R  +   E+ +N    +G     +     
Sbjct: 58  LRQFQDLGHEAIFLIGDFTGMIGDPTGKSATRPPLTRDEVIDNARTYEGQIFKILDP--- 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
               L++ N +W+  +   D+++      +V RML  +    R    Q ++  EF Y ++
Sbjct: 115 -EKTLVMFNSSWMGEMSSADMIQLAAKH-TVARMLERDDFHKRYSSGQPIAIHEFLYPLV 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD V L       +++GG+DQ  N++ G +L +    P    +T P+L       KM 
Sbjct: 173 QGYDSVALK----ADVELGGTDQKFNLLVGRELQKHYGQPPQVVMTMPILEGLDGVQKMS 228

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEIN 296
           K+L   I +N+    P   +    ++ D  +  + + L+  PM +I+  R     G+   
Sbjct: 229 KSLGNYIGINEA---PDEMFGKLMSVSDELMWRYFELLSFRPMQDIEVFRDRIAAGENPR 285

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K ++  E+    HG   A +     ++ F      + +P ++++    S G+ L  L+
Sbjct: 286 DIKFLLGEELVERFHGARAAGEVRGRFIDRFQKGAMPEDIPGVTVAAP--SDGLPLPNLL 343

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG   ST+EA R ++  A++ +   + +  L+     F++        GK+      L
Sbjct: 344 KEAGLVGSTSEAMRMIRQGAVRRDGERVEDPGLK-----FEAGSEAVYQVGKRRFARVRL 398

Query: 417 C 417
            
Sbjct: 399 V 399


>gi|328474831|gb|EGF45635.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 405

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 149/390 (38%), Positives = 207/390 (53%), Gaps = 13/390 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V           L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDTEANLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISN 386
           V  G   S  +AR  + + AI IN     +
Sbjct: 359 VTLGIEPSKRQAREDVANGAIYINGERQQD 388


>gi|237734570|ref|ZP_04565051.1| tyrosyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382390|gb|EEO32481.1| tyrosyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 408

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 135/415 (32%), Positives = 210/415 (50%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  L+   + G +T YIG D T  SLH GH +  ++   L++ G
Sbjct: 3   IYDELVWRGLIKDVSSPD-LEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKEAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP   D  R M+  + ++ N   +K        +        ++N
Sbjct: 62  HNPILLVGGATGLIGDPKP-DTERPMITKETVEHNFACLKKQAQDLFGF-------EVVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +ID LR+ G +F++N ML+ + V+ RL  +  +++ EF+YMI+QA DF  L
Sbjct: 114 NYDWSKDLNFIDFLRDYGKYFNINYMLNKDIVKRRL--DAGITYTEFSYMIMQAMDFEWL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             N +C +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 172 YNNKNCVMQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATE 305
           ++E TSPY  +Q++ N +D  V+ + K LT L   EI  +         + EA + +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDDKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALARE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T +HG E  E+A   +   F   I S  +  +      +   EV+  + +L  +   G
Sbjct: 292 VITFLHGAEAYEEAVNISKMLFSGQIQSLTLAQVKVCFEGVPSIEVNEDLNILDALTTCG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EAR  +   +I IN   I + +  +   +        +  GKKN+ +  
Sbjct: 352 AAKSKREAREFVNGGSILINGERIKDIEFIVTKANAFGNEATVVRRGKKNYFVIK 406


>gi|167756860|ref|ZP_02428987.1| hypothetical protein CLORAM_02409 [Clostridium ramosum DSM 1402]
 gi|167703035|gb|EDS17614.1| hypothetical protein CLORAM_02409 [Clostridium ramosum DSM 1402]
          Length = 408

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 135/415 (32%), Positives = 210/415 (50%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  L+   + G +T YIG D T  SLH GH +  ++   L++ G
Sbjct: 3   IYDELVWRGLIKDVSSPD-LEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKEAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP   D  R M+  + ++ N   +K        +        ++N
Sbjct: 62  HNPILLVGGATGLIGDPKP-DTERPMITKETVEHNFACLKKQAQDLFGF-------EVVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +ID LR+ G +F++N ML+ + V+ RL  +  +++ EF+YMI+QA DF  L
Sbjct: 114 NYDWSKDLNFIDFLRDYGKYFNINYMLNKDIVKRRL--DAGITYTEFSYMIMQAMDFEWL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             N +C +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 172 YNNKNCVMQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATE 305
           ++E TSPY  +Q++ N +D  V+ + K LT L   EI  +         + EA + +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDDKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALARE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T +HG E  E+A   +   F   I S  +  +      +   EV+  + +L  +   G
Sbjct: 292 VITFLHGAEAYEEAVNISKMLFSGQIQSLTLAQVKVCFEGVPSIEVNEELNILDALTTCG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EAR  +   +I IN   I + +  +   +        +  GKKN+ +  
Sbjct: 352 AAKSKREAREFVNGGSILINGERIKDVEFIVTKANAFGNEATVVRRGKKNYFVIK 406


>gi|315634402|ref|ZP_07889689.1| tyrosine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476992|gb|EFU67737.1| tyrosine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 395

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 175/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDMNT-VLAELK-RGVDEILSEQDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTRIVFNSEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GHDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +L   I + +    P   +    +I D  +  +   L+  P++EI ++           +
Sbjct: 230 SLGNYIGVTEA---PSEMFGKIMSISDDLMWDWYNLLSFRPLAEIAQLKADVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    AE A    +  F        MP  +   +     +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHDDAAAEAAEQEFINRFQKGAMPDDMPEFTFESE-----IGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +KI+   + + KL I               GK+      +
Sbjct: 342 EAGLVASTSEANRMVQQGGVKIDGEKVEDAKLVISAS------TAVYQVGKRKFAKVTV 394


>gi|224501460|ref|ZP_03669767.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
          Length = 396

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 149/392 (38%), Positives = 208/392 (53%), Gaps = 13/392 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VH  E  E+A   +   F   + +     I     +V           L+  +
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSEANLVDWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           V  G   S  +AR  + + AI IN     + +
Sbjct: 359 VTLGIEPSKRQAREDVGNGAIYINGERQQDLE 390


>gi|169350220|ref|ZP_02867158.1| hypothetical protein CLOSPI_00964 [Clostridium spiroforme DSM 1552]
 gi|169293003|gb|EDS75136.1| hypothetical protein CLOSPI_00964 [Clostridium spiroforme DSM 1552]
          Length = 408

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 136/415 (32%), Positives = 213/415 (51%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  L+   + G +T YIG D T  SLH GH +  ++   L+  G
Sbjct: 3   IYDELVWRGLIKDVSSPD-LEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP   D  R M+  + ++ N   +K        +        ++N
Sbjct: 62  HNPILLVGGATGLIGDPKP-DTERPMITKETVEHNFNCLKKQAQDIFGF-------EVVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +ID LR+ G +F+VN ML+ + V+ RL  +  +++ EF+YMI+QA DF  L
Sbjct: 114 NFDWSKDLNFIDFLRDYGKYFNVNYMLNKDIVKRRL--DAGITYTEFSYMIMQAMDFEWL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             N +C +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 172 YNNKNCVMQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATE 305
           +KE TSPY  +Q++ N +D  V+ + K LT L   EI  +         + EA + +A E
Sbjct: 232 DKEKTSPYEMYQFFINSEDEKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALARE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T +HG+E  E+A   +   F   I S  +  +      ++  +V+  + +L  ++  G
Sbjct: 292 VITFLHGKEAYEEAQNISKMLFSGQIQSLTLDQVKVCFEGVASVDVNEDLNILDALITCG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EAR  +   ++ IN   I +    +K ++        +  GKKN+ +  
Sbjct: 352 GAKSKREAREFVNGGSVLINGERIKDVDFVVKKENAFGNEATVIRRGKKNYFVIK 406


>gi|212697022|ref|ZP_03305150.1| hypothetical protein ANHYDRO_01587 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675992|gb|EEB35599.1| hypothetical protein ANHYDRO_01587 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 439

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 163/425 (38%), Positives = 249/425 (58%), Gaps = 21/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 11  SVFDELKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNY 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT----D 122
           GH+PI+L+GGGT++IGDPS R + R +M  + I  N       F  F+++          
Sbjct: 71  GHRPIALLGGGTTMIGDPSGRSDMRMVMTKERIDHNANCFYKQFQRFLEFENDGEDSGDK 130

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M+NN  WL ++ ++D LR++GS F VN ML  ++ ++R+  E+ L+F EF+YM+LQ+Y
Sbjct: 131 AIMVNNGDWLLNLPFVDFLRDVGSNFLVNEMLKKDAYKNRM--EKGLTFFEFSYMLLQSY 188

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  
Sbjct: 189 DFLELFRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDEKVYGMTFKLLTTADGVKMGKSQK 248

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG-KEINEAKKI 301
           GA+WL+++ TS Y  +QY RN+DD DV  F   LT LP  E  R+   +  KEIN AK++
Sbjct: 249 GAVWLDEKKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTDECRRLGNGKDAKEINHAKEV 308

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EIT ++HG ++A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G 
Sbjct: 309 LAYEITKLIHGEDKAKEALEASKALFSGAGDESAMPTTEIEKEEL--PMGILTLLTKLGL 366

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK--------NHII 413
             S ++AR  +K   + +N+  I++ + +I  + F     I     KK        N II
Sbjct: 367 TKSNSQARDSVKGGGVSVNDEKITDPRFEINEELFKDGKIIV----KKVKNLPQGYNKII 422

Query: 414 CHLCG 418
             + G
Sbjct: 423 FKIAG 427


>gi|254508205|ref|ZP_05120329.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548822|gb|EED25823.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 395

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYSGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQKPQVVLTMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
           +    I +++    P   +    +I D  + ++ + L+  P+ EI  +      GK   +
Sbjct: 230 SAHNYIGISEA---PSEMFGKIMSISDDLMWNYYELLSFRPLEEIAELKAGVESGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H   +A+ A    +  F  +     MP  +        G+ +  L+ 
Sbjct: 287 VKVALAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEFA-----FDAGLPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI+   +++ K   +       G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIDGEKVADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|304436501|ref|ZP_07396475.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370547|gb|EFM24198.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 400

 Score =  327 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 170/390 (43%), Positives = 248/390 (63%), Gaps = 10/390 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + IL ERGF+ Q ++   L  L     VT Y G+D TA SLHAGHL  LM +  +Q+ 
Sbjct: 2   NAVDILKERGFLAQCTDEAALRDLLDHEQVTFYTGFDPTADSLHAGHLIALMAMSHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT  +GDPS R + R++M  + I  N +  +   S FI +  G   A+M+
Sbjct: 62  GHRPICLVGGGTGTVGDPSGRTDMRKVMTDETIAHNCDCFRAQISHFIDFTDG--RAIMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  + YIDLLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+E
Sbjct: 120 DNGDWLRKLNYIDLLRDVGAHFTVNRMLAAESYKQRW--EKGLTFLEFNYMIMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRL+MGG DQW NII G++L  R K   +F LT+ LLT + G KMGKT  GA+W
Sbjct: 178 LNRRYGCRLEMGGDDQWSNIIAGVELCRRKKNITVFGLTNKLLTKSDGKKMGKTAGGALW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSPY+F+QYWRN+DD DV++    LT LPM E+ R+  ++G+E+N +K+++A E+
Sbjct: 238 LDPKKTSPYDFYQYWRNVDDTDVLTCLSLLTFLPMEEVHRLTSVEGQEMNHSKEVLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG +EA KA   A   F   +  Q      + +  V+ G  L+  + + G  +S  
Sbjct: 298 TKIVHGEQEAHKAQEMARALFGGGVSEQ------VPQLHVTCGEKLIDALTREGVFSSKG 351

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           EARR ++   + +N + +S+E   ++   F
Sbjct: 352 EARRLIQQGGVTLNETRVSDEHYVLQADVF 381


>gi|254784884|ref|YP_003072312.1| tyrosine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|237686409|gb|ACR13673.1| tyrosine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 432

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 156/432 (36%), Positives = 230/432 (53%), Gaps = 22/432 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++ L  L  RG + Q++    L     +   T Y G+D TA SLH G L  L+ L
Sbjct: 1   MTAASNELLEDLQARGLVAQMTGDDALHAWL-EQPRTLYCGFDPTADSLHIGSLVPLLTL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+ + R++     +   ++K++G  S FI++  G+
Sbjct: 60  KRFQMAGHKPLALVGGATGLIGDPSFKAQERKLNTPDIVAGWVDKLRGQVSQFIEFDCGE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+  I  +D LR++G  FS+N M+  ESV+ RL RE + +SF EF YMIL
Sbjct: 120 NAAEVVNNLDWIGQINVLDFLRDVGKHFSINNMVQKESVKQRLDREGEGISFTEFTYMIL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL K YDC LQ+GGSDQWGNI  G DL  RL   ++F LT PL+T + GTK GK
Sbjct: 180 QSYDFAELYKQYDCTLQIGGSDQWGNITGGTDLTRRLHGGQVFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           T +G IWL+   TSPY F+Q+W N  DADV  F +  T L ++EI+ +       +   +
Sbjct: 240 TETGTIWLDPAKTSPYAFYQFWLNTADADVYKFLRYFTFLSVAEINAIEDTDKAAEGRPQ 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
           A+ I+A E+T +VHG E    A       F   +               +P+  +  D  
Sbjct: 300 AQSILAEEVTRLVHGDEGLAAAQRITQAMFSGDLADLSETDLEQLALDGLPSGDLPSDYA 359

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTGN 401
            +   L +L+ + G   +  EA+  L   A+ IN +    E      +   ++       
Sbjct: 360 DK--PLTSLLAECGMVKAAREAKDALGRKAVFINGTAYGAEDNMNASVCFAVERALYDRF 417

Query: 402 IKLSFGKKNHII 413
             +  GKK + +
Sbjct: 418 YLVKLGKKKNFL 429


>gi|113461450|ref|YP_719519.1| tyrosyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|170718444|ref|YP_001783661.1| tyrosyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|112823493|gb|ABI25582.1| tyrosyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|168826573|gb|ACA31944.1| tyrosyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 395

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 183/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  ++ L  RG  H  S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTNINT-VIAELK-RGVDHVFSEQDFIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQNFGHEVIFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYKTQIFKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  I ++  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTQVVFNSDWLGKLGTIGMI-RLASNYTVARMLERDDFKKRFNNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GHDSVHL----EADVELGGTDQTFNLLMGRELQKSCGQKPQVAITMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +L   I + +   +P N +    +I D  +  +   L+  P++EI ++ K         +
Sbjct: 230 SLGNYIGVTE---TPSNMFGKIMSISDELMWDWYNLLSFRPLTEITQLKKDVENGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI T  H  ++A+ A    ++ F        MP  + + +     +GL  L+ 
Sbjct: 287 VKILLAKEIITRFHSADDADTAEQEFIDRFQKGAIPDDMPEFTFTGE-----IGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R ++   +KIN   + N KL +               GK+      +
Sbjct: 342 DAGLVGSTSEAIRMVQQGGVKINGEKVDNAKLIVSPS------TAVYQVGKRKFARVTI 394


>gi|227517595|ref|ZP_03947644.1| tyrosine--tRNA ligase [Enterococcus faecalis TX0104]
 gi|227554748|ref|ZP_03984795.1| tyrosine--tRNA ligase [Enterococcus faecalis HH22]
 gi|229546460|ref|ZP_04435185.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1322]
 gi|229548575|ref|ZP_04437300.1| tyrosine--tRNA ligase [Enterococcus faecalis ATCC 29200]
 gi|293384954|ref|ZP_06630789.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|293389225|ref|ZP_06633687.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|307268205|ref|ZP_07549590.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307272446|ref|ZP_07553700.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307277081|ref|ZP_07558186.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307278276|ref|ZP_07559355.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289672|ref|ZP_07569616.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307289902|ref|ZP_07569832.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312900223|ref|ZP_07759535.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312904348|ref|ZP_07763510.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312905944|ref|ZP_07764957.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909290|ref|ZP_07768146.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|312953010|ref|ZP_07771863.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|21309883|gb|AAM46083.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis]
 gi|227074994|gb|EEI12957.1| tyrosine--tRNA ligase [Enterococcus faecalis TX0104]
 gi|227176119|gb|EEI57091.1| tyrosine--tRNA ligase [Enterococcus faecalis HH22]
 gi|229306310|gb|EEN72306.1| tyrosine--tRNA ligase [Enterococcus faecalis ATCC 29200]
 gi|229308433|gb|EEN74420.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1322]
 gi|291077772|gb|EFE15136.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081389|gb|EFE18352.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|306499043|gb|EFM68531.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306499486|gb|EFM68859.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505027|gb|EFM74218.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306506252|gb|EFM75417.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306510908|gb|EFM79924.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515474|gb|EFM84004.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310627939|gb|EFQ11222.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310629039|gb|EFQ12322.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310632444|gb|EFQ15727.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311290314|gb|EFQ68870.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311292584|gb|EFQ71140.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025584|gb|EFT37516.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315030556|gb|EFT42488.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315031334|gb|EFT43266.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315034437|gb|EFT46369.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315144525|gb|EFT88541.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315146919|gb|EFT90935.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315149371|gb|EFT93387.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315153921|gb|EFT97937.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315156719|gb|EFU00736.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315159750|gb|EFU03767.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315162722|gb|EFU06739.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315166205|gb|EFU10222.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315166808|gb|EFU10825.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170800|gb|EFU14817.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173858|gb|EFU17875.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315576124|gb|EFU88315.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315578789|gb|EFU90980.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315581554|gb|EFU93745.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|327534219|gb|AEA93053.1| tyrosine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329576903|gb|EGG58386.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 423

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 142/426 (33%), Positives = 210/426 (49%), Gaps = 15/426 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     + +  L+ R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++
Sbjct: 1   MEGDNMNIIDELAWRDAINQQTNEEGLRELTENTSISLYCGVDPTGDSMHIGHLIPFMMM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH P  L+GGGT  IGDPS R   R +   + +Q N++ +              
Sbjct: 61  KRFQLAGHHPYILIGGGTGTIGDPSGRTTERVLQTMEAVQHNVDSLSNQMKKLFGKDAEV 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T   M+NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ
Sbjct: 121 T---MVNNYDWLSELSLLDFLRDYGKNFNVNTMLAKDIVASRL--ESGISFTEFTYQILQ 175

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMG 238
           + DF  L K ++ +LQ+GG+DQWGNI  G+DL  + + P  K+F LT PL+  A GTK G
Sbjct: 176 SIDFYTLHKKHNIQLQIGGADQWGNITAGLDLIRKKEGPEAKVFGLTIPLMLKADGTKFG 235

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEIN 296
           KT  GAIWL+ + TSP+ F+Q+W N DD DV+ + K  T L   EID       +     
Sbjct: 236 KTAGGAIWLDPKKTSPFEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDALAEKVEKEPGKR 295

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGM 350
           EA++ +A E+T  VH     E+A   +   F  +I    +  I      +   E+     
Sbjct: 296 EAQRRLAEEVTRFVHDDAALEEAQKISEALFSGNIKDLTIEEIEQGLEHVPTVEITKDAK 355

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +V      S  +AR  +   AI IN   +++    +          + +  GKKN
Sbjct: 356 NIVDWLVDTEIEPSKRQAREDVSGGAISINGDRVTDLDFAVDPTQHFDGKFVVVRKGKKN 415

Query: 411 HIICHL 416
           + +  +
Sbjct: 416 YFLAKV 421


>gi|51246721|ref|YP_066605.1| tyrosyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81641170|sp|Q6AJ82|SYY_DESPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50877758|emb|CAG37598.1| probable tyrosyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 405

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 110/423 (26%), Positives = 182/423 (43%), Gaps = 32/423 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLT 55
           MP+ +      L ERG +    +  EL     +       +    G+D TA  LH GH  
Sbjct: 3   MPSLEEQI--ELIERGCV-DCISRDELVKKLKKSAETGIPLKVKAGFDPTAPDLHLGHTV 59

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  L   Q  GH+ I L+G  T +IGDP+ + E+R+ +  +++ EN E  K      + 
Sbjct: 60  LLQKLKQFQDLGHQVIFLIGDFTGMIGDPTGKSETRKALTVEQVAENAETYKKQVFKILD 119

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL  +   +++ ++ S  +V RML  E  ++R +  + +S  EF 
Sbjct: 120 P----EKTTVAFNSTWLSKLTAHEMI-QLASELTVARMLEREDFKNRYESGKPISIHEFM 174

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASG 234
           Y ++Q YD V L    +  +++GG+DQ  N++ G DL           LT PLL      
Sbjct: 175 YPLIQGYDSVAL----EADVEIGGTDQRFNVLMGRDLQRSRGQAPQVVLTLPLLEGLDGV 230

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKLQ 291
            KM K+L   I + ++  S Y       ++ D  +  + + L+ L  +EI       +  
Sbjct: 231 NKMSKSLGNYIGITEDADSIY---GKVLSVSDDLMFRYYELLSDLTTAEIADLRAQMEAG 287

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
                E KK +A E+T   H  E A  A       F      + +P   +S DE    + 
Sbjct: 288 TLHPKEVKKQLARELTARYHSEEAAIAAEQNFENVFKKGGIPEDLPEYQVSLDE---PIW 344

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  L+  A    ST+E RR +K  A+ ++     +E + I  +     G + +  GK+  
Sbjct: 345 LPKLLADAEMVKSTSEGRRMIKQGAVSLDGEKAVDESMLISPE-----GEVLIKVGKRRF 399

Query: 412 IIC 414
           +  
Sbjct: 400 VKV 402


>gi|94502122|ref|ZP_01308624.1| tyrosyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94425759|gb|EAT10765.1| tyrosyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 430

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 224/428 (52%), Gaps = 21/428 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG  +  +   EL      G  T Y G+D TA SLH G L  L++L   Q+ G
Sbjct: 5   LIDDLKARGLFNDCTAEAELIEKLESGCQTLYCGFDPTADSLHIGSLVPLLVLKRFQEAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P++L+GG T +IGDPSF+   R++     +   +EK+K   S+FI +  G   A ++N
Sbjct: 65  HRPLALVGGATGLIGDPSFKAAERQLNGPDVVAGWVEKLKAQVSAFIDFDAGDKSAKVVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W+  +  I+ LR++G +FSVN+M+  ESV+ R++RE   +SF EF YM+LQ+YDF +
Sbjct: 125 NLDWVGEMNVIEFLRDVGKYFSVNQMIQKESVKQRIEREGSGISFTEFTYMLLQSYDFAK 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   C LQ+GGSDQWGNI  G +L  R+   ++F LT PL+T A GTK GKT SG IW
Sbjct: 185 LNETESCVLQIGGSDQWGNITGGTELTRRMHGNQVFGLTLPLVTKADGTKFGKTESGTIW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  DADV  F +  T L + EI+    A  + +    A+ I+A 
Sbjct: 245 LDPKRTSPYAFFQFWMNTADADVYKFLRYFTFLSIEEIEAIEKADAEVQGRKSAQGILAK 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGMGLL 353
           E+T ++HG E    A       F              I    +P+  +   E++    L 
Sbjct: 305 EVTRLLHGEEGLAAAERITEALFSGDATQLSEHDLEQIKQDGLPSSDLDTSELADK-PLT 363

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL-----QIKLQDFDSTGNIKLSFGK 408
           +++ +AG      + +  L  NA+ +N      + L         +         +  GK
Sbjct: 364 SILSEAGLGQGK-QIKDALGRNAVIVNGQAYGMDDLMNATVIFSKEKAMYGRFFIIKLGK 422

Query: 409 KNHIICHL 416
           K H +  +
Sbjct: 423 KKHHLFEI 430


>gi|121997667|ref|YP_001002454.1| tyrosyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121589072|gb|ABM61652.1| tyrosyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 400

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 187/408 (45%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG + +I    ELD    S   +    G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 9   LIRRG-VEEIIPEAELDERLRSGKRLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T+ IGDPS +  +R  +  +E+++N    +    + +          ++ N  
Sbjct: 68  LFLIGDFTATIGDPSGKSATRPALTPEEVRQNARTYEEQIYAILDPK----RTRLVFNSD 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+ +++    L ++ S ++V RML  +    R +   +++  EF Y ++Q YD V L   
Sbjct: 124 WMGTMQA-GDLIQLASRYTVARMLERDDFHQRYQAGSAIAIHEFLYPLIQGYDSVAL--- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L  +        LT PLL       KM K+L   + + +
Sbjct: 180 -EADIELGGTDQRFNLLVGRELQRQFGQKPQTVLTMPLLVGLDGHKKMSKSLGNYVGVKE 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEI 306
              S  + +    +I D  +  + + L+  P  E++      + +G    +AK  +A E+
Sbjct: 239 ---SAEDIYAKLMSISDDLMWRYFELLSLRPWREVEALQARIRDEGMNPRDAKDALAYEL 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
                G  EA++A  A +  F      + +P ++++ DE   G+G+   + +AG   ST+
Sbjct: 296 AERFCGAVEAQRAREAFVARFRHGAVPEDVPQVTLTYDE-QGGVGIAAALKEAGLVGSTS 354

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E  R ++  A++++   I + K +++     S     L  GK+     
Sbjct: 355 EGLRMVRQGAVRVDGERIEDPKARLE-----SGRAHLLQVGKRRFARV 397


>gi|261210042|ref|ZP_05924340.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840807|gb|EEX67349.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 426

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 151/421 (35%), Positives = 222/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +   V  Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFATSQV-LYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGTEVGGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALRTGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            ++T  VHG E    A       F   +    +  +       +     SR   LL L++
Sbjct: 305 EQVTRFVHGEEGLAAAQRITQALFSGDVSYLTLSELRQLELDGLPCVAASRSDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|323495918|ref|ZP_08100986.1| tyrosyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323319134|gb|EGA72077.1| tyrosyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 395

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 173/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYSNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQKPQVVLTMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++    P   +    +I D  + ++ + L+  P++EI  +       K   +
Sbjct: 230 SAHNYIGISEA---PSEMFGKIMSISDDLMWNYYELLSFRPLNEIADLKAGVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H   +A+ A    +  F  +     MP       +   G+ +  L+ 
Sbjct: 287 VKVALAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGLPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI+   +++ K   +       G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIDGEKVADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|301120217|ref|XP_002907836.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262106348|gb|EEY64400.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 428

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 147/427 (34%), Positives = 222/427 (51%), Gaps = 17/427 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
            S  L+ L +RG +  +++      +D L  S      Y G+D TA SLH G+L Q + L
Sbjct: 1   MSRALAALRQRGMLAALTHQEAGASIDKLLQSSRAPAVYCGFDPTADSLHLGNLLQGIAL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ G +PI L+GG T +IGDPS + E R ++    +  N ++I    S+ + +   K
Sbjct: 61  RHFQRAGVRPILLVGGATGMIGDPSGKSEERVLLSDDTVLHNAQEIAKGLSAVLDFDDPK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A++ NN  W   +  +  +R+IG  F VN ML  ESV+ RL+ +Q +SFLEF+Y + Q
Sbjct: 121 TGAIICNNAEWHTQMSAVTWMRDIGRHFRVNAMLQRESVKKRLETDQGISFLEFSYQLFQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+ L +NY C  Q+GGSDQWGNI  GI+L  +     +F  T  LLTTA+G K GK+
Sbjct: 181 AYDFLHLYRNYGCVAQIGGSDQWGNIASGIELVRKSTGEGVFGATLALLTTATGEKYGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
              AIWL+ E TS ++F+Q++   DD DV       T   + EI  +        E   A
Sbjct: 241 AGNAIWLDSEKTSVFDFYQFFLRSDDRDVEKLLNSFTFREVDEIHGIIAEHEKAPEKRAA 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEVSR 348
           +K++A EIT M+HG+E  + A  A    F               +   P   +S+ +V  
Sbjct: 301 QKVLAEEITVMMHGQEGLKAALDATEMLFGKKTGPLTSEEMLCMAGDAPMTVLSRADVIN 360

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              L+ L V+ G   S  E RR +KS  + +NN  + +  L+I   +      + +  G+
Sbjct: 361 -QSLVDLAVRIGATKSKAECRRLIKSGGVYLNNERVESAALRIGKSNLLDDKVLVVRVGR 419

Query: 409 KNHIICH 415
           +N+ I  
Sbjct: 420 RNNFIVQ 426


>gi|261250298|ref|ZP_05942874.1| tyrosyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260939414|gb|EEX95400.1| tyrosyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 395

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 171/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYTGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQKPQVVLTMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI  +       K   +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAELKAGVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H   +A+ A    +  F  +     MP       +   G+ +  ++ 
Sbjct: 287 VKVALAKEIIARFHTEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGLPVSNILK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI+   +++ K           G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIDGEKVADSKFAP------DAGTYVFQVGKRKFARITI 394


>gi|87121327|ref|ZP_01077217.1| tyrosyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163484|gb|EAQ64759.1| tyrosyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 435

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 152/432 (35%), Positives = 224/432 (51%), Gaps = 20/432 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +D L  L  RG I Q +   EL    ++   T Y G+D TA SLH G L  L++L
Sbjct: 1   MTIGSNDLLKDLQNRGLIAQTTAEAELANHLNEASRTLYCGFDPTADSLHIGSLVPLLML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP++L+GG T +IGDPSF+   R++   + + E + K+K   S FI++    
Sbjct: 61  KRFQQAGHKPLALVGGATGLIGDPSFKAAERKLNGPEVVNEWVSKLKVQVSQFIEFNDSA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W   +  +D LR++G  FS+N M+  ESV+ R+ RE + +SF EF YMIL
Sbjct: 121 NSAEVVNNYDWTKDLNILDFLRDVGKHFSINAMIQKESVKQRINREGEGISFTEFTYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q++DF EL +   C LQ+GGSDQWGNI  G +L  R     +F LT PL+T + GTK GK
Sbjct: 181 QSFDFAELNRLNGCSLQIGGSDQWGNITGGTELTRRQNGNHVFGLTMPLVTKSDGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T SG IWL+ + TS Y F+Q+W N  DAD   F K  T L + EID    A  + +   +
Sbjct: 241 TESGTIWLDAKKTSQYAFFQFWLNTADADAYKFLKYFTFLSVEEIDAIEKADQEAQGRPQ 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEV 346
           A+ I+A E+T +VHG E    A       F              I    +P+       +
Sbjct: 301 AQAILAKEVTKLVHGEEGLAAAERITQALFSGEAADLSEQDLAQIQLDGLPSTEFELSSL 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI--ISN---EKLQIKLQDFDSTGN 401
           +  M L +   +AG AT+  + +  L+ N++ +N     + +          ++      
Sbjct: 361 TD-MPLTSFFTEAGLATNGKQVKDALQRNSVFVNGEAKGMQDNMLATEIFAAENGYYNKY 419

Query: 402 IKLSFGKKNHII 413
             +  GKK H +
Sbjct: 420 FLVKLGKKKHHL 431


>gi|319760503|ref|YP_004124441.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039217|gb|ADV33767.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 432

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 161/430 (37%), Positives = 232/430 (53%), Gaps = 15/430 (3%)

Query: 1   MPAFKS----DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ 56
           M  + S    D ++ L ERGFI QI+N   L+ +     +T Y G+D T+ SLH GHL  
Sbjct: 1   MKTYNSITNVDVINYLYERGFIAQITNKNILNSILQSKSITLYCGFDPTSDSLHIGHLVP 60

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L+ L   QK GHKPI L+GG T +IGDPSF+D  R++     IQ+ IEKIK   SSFI  
Sbjct: 61  LLCLKKFQKFGHKPIILLGGATGLIGDPSFKDSERQLNPMNTIQQWIEKIKSQISSFIDL 120

Query: 117 --GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLE 173
                  +  ++NN TW  S   +  LR+IG FFS+N+M++ + ++ RLK +   +S+ E
Sbjct: 121 NSKNHPHNIHIVNNYTWFSSTNILTFLRDIGKFFSINKMINKDFIKKRLKEDNCGISYTE 180

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F+Y ++Q+YDF  L KNY   LQ+GGSDQWGNII GIDL  R+   K + +T PLLTT +
Sbjct: 181 FSYNLMQSYDFFYLYKNYGVILQIGGSDQWGNIISGIDLIRRIYNKKTYGITVPLLTTIN 240

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQ 291
             K GKT    IW++   TSPY F+QYW NIDD  V SF K  T + + +I+        
Sbjct: 241 NIKFGKTEKNTIWIDPNKTSPYKFYQYWLNIDDKQVCSFLKIFTDMNIEQINFLEKKMNN 300

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDE 345
              I   K  +A +IT ++HG++  + A       F        +   +      I    
Sbjct: 301 NYFIPITKTTLAEKITKLIHGKQGLKSAQRITKNIFYDHPLDLTLEDFNQLAKDGIPSII 360

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + + + L   +V++  ATS ++AR  ++S+AI IN     N++      D        L 
Sbjct: 361 LKKDITLQQALVESKLATSKSQARYFIESHAITINKIKQLNKQYIFNNTDRLFNSYTLLK 420

Query: 406 FGKKNHIICH 415
            GKK+  +  
Sbjct: 421 KGKKHSCLIQ 430


>gi|90415201|ref|ZP_01223135.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90332524|gb|EAS47694.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 455

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 153/434 (35%), Positives = 225/434 (51%), Gaps = 21/434 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    S+ ++ L +RG + Q+S   EL+    Q     Y G+D TA SLH GHL  L++L
Sbjct: 22  MKQSGSEIINQLRQRGLVAQVSADNELEEHLDQ-PRALYCGFDPTADSLHLGHLVPLLVL 80

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH PI+L+GG T +IGDPSF+   R++     I    +KIKG  S FI +  G 
Sbjct: 81  KRFQEAGHTPIALVGGATGMIGDPSFKAAERKLNTPDVISSWADKIKGQVSQFIDFDCGA 140

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A++ NN  W   +  ++ LR++G  FSVN M++ ESV+ RL RE   +SF EF+Y +L
Sbjct: 141 NSAVVANNLDWTEKMSALEFLRDVGKHFSVNNMINKESVKLRLDREGSGISFTEFSYALL 200

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  DF EL + ++C LQ+GGSDQWGNI+ GIDL  R    + FALT PL+T + GTK GK
Sbjct: 201 QGMDFAELNRRHNCTLQVGGSDQWGNIVGGIDLARRQNKSQCFALTVPLITKSDGTKFGK 260

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T +GA+WL+   TSP  F+Q+W N+ DADV  F +  T L + EI     A  + +   +
Sbjct: 261 TEAGAVWLDPSKTSPLAFYQFWLNVADADVYKFLRYFTFLSLEEISAVEEADNKAEGKPQ 320

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            + ++A E T +VHG +    A       F    +              MP+  +   E+
Sbjct: 321 GQAVLAREATRLVHGEDGLAAALRITEALFTGDPNQLPESDFEQLCLDGMPSSELPVAEL 380

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTGN 401
           +    L +L++  G A    E +  L   ++ IN   I  E+           +      
Sbjct: 381 ADK-PLTSLLMDCGMAKVGREVKDALGRQSVFINGRAIGAEQNMKAAELFDSSNALFGRF 439

Query: 402 IKLSFGKKNHIICH 415
             +  GKK + +  
Sbjct: 440 FLVRLGKKKYHLLQ 453


>gi|259501232|ref|ZP_05744134.1| tyrosine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191040|ref|ZP_07267294.1| tyrosyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167359|gb|EEW51854.1| tyrosine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 417

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 143/412 (34%), Positives = 206/412 (50%), Gaps = 17/412 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHNEKCLTSQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRL--ATGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTL 355
           +A E+T  VHG      A       F+ +I    +  I          E+      L+ L
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIMELSVKQIEQGFKNAPYVEISKESKNLVDL 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+ G   S  +AR  + + AI +N S  ++    + + +      + +  G
Sbjct: 356 LVETGIEKSKRQAREDINNGAIYVNGSRQNDCDFLVDVPNSFEGKFVIIRRG 407


>gi|30249402|ref|NP_841472.1| tyrosyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|75540516|sp|Q82UQ1|SYY_NITEU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|30138765|emb|CAD85342.1| t-RNA synthetase, class Ib [Nitrosomonas europaea ATCC 19718]
          Length = 409

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 174/420 (41%), Gaps = 23/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    S  L  L  RG    +        L     +    G+D TA  LH GH   L  L
Sbjct: 1   MSESISHQLQ-LIRRGCQELLIEEEFAQKLAQGRPLRVKAGFDPTAPDLHLGHTVLLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH  + L+G  T +IGDPS +  +R  +  ++I +N +         +K     
Sbjct: 60  RQLQDLGHHILFLIGDFTGMIGDPSGKSATRPPLTREQITQNADTYASQVFKILKP---- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +W+      D++  + + ++V RML  +    R    + ++  EF Y ++Q
Sbjct: 116 EQTEVVFNSSWMDKFSAADVI-RLAATYTVARMLERDDFSKRYHENRPIAIHEFLYPLVQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L       L++GG+DQ  N++ G +L +    P    LT PLL    G  KM K
Sbjct: 175 GYDSVALK----ADLELGGTDQKFNLLVGRELQKHYGQPPQCILTMPLLEGLDGIQKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +L+  + +N+   SP   +    ++ D  +  + + L+   +  + +       G    E
Sbjct: 231 SLNNYVGINE---SPAEIFGKLMSVSDTLMWRYIELLSFESLETVRQWQNEVESGCNPRE 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K   A EI    H + +A +AA      F   +    +P   +   +   G+ L  L+ 
Sbjct: 288 IKMRFAREIVARFHSQTDAVRAAEEFEARFSKGVIPDDIPEKKLYIQD--AGLALPQLLK 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   ST+EA R ++   +K+N   +S++   I      S   +    GK+      L 
Sbjct: 346 LAGLTASTSEALRMIEQGGVKLNGDKVSDKTRIIP-----SNVTVIAQIGKRKFAKVTLV 400


>gi|309805131|ref|ZP_07699184.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|309809022|ref|ZP_07702896.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308165585|gb|EFO67815.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308170678|gb|EFO72697.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 417

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 143/412 (34%), Positives = 205/412 (49%), Gaps = 17/412 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHNEKCLTSQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRL--ATGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTL 355
           +A E+T  VHG      A       F+ +I    +  I          E+      L+ L
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISKESKNLVDL 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+ G   S  +AR  + + AI +N S   +    + + +      + +  G
Sbjct: 356 LVETGIEKSKRQAREDINNGAIYVNGSRQDDCDFLVDVPNSFEGKFVIIRRG 407


>gi|312875341|ref|ZP_07735349.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089175|gb|EFQ47611.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 417

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 143/412 (34%), Positives = 206/412 (50%), Gaps = 17/412 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHNEKCLTSQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRL--ATGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTL 355
           +A E+T  VHG      A       F+ +I    +  I          E+      L+ L
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISKESKNLVDL 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+ G   S  +AR  + + AI +N S  ++    + + +      + +  G
Sbjct: 356 LVETGIEKSKRQAREDINNGAIYVNGSRQNDCDFLVDVPNSFEGKFVIIRRG 407


>gi|309808169|ref|ZP_07702079.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|315653252|ref|ZP_07906175.1| tyrosine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|308168550|gb|EFO70658.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|315489415|gb|EFU79054.1| tyrosine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 417

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 144/412 (34%), Positives = 206/412 (50%), Gaps = 17/412 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHNEKCLTSQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRL--ATGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTL 355
           +A E+T  VHG      A       F+ +I    +  I          E+S     L+ L
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISQESKNLVDL 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+ G   S  +AR  + + AI +N S   +    + + +      + +  G
Sbjct: 356 LVETGIEKSKRQAREDINNGAIYVNGSRQDDCDFLVDVPNSFEGKFVIIRRG 407


>gi|90962338|ref|YP_536254.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227891593|ref|ZP_04009398.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300696|ref|ZP_07206882.1| tyrosine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|123391329|sp|Q1WSF8|SYY_LACS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|90821532|gb|ABE00171.1| Tyrosyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227866740|gb|EEJ74161.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214988|gb|ADJ79404.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus salivarius CECT 5713]
 gi|300851701|gb|EFK79399.1| tyrosine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 416

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I+Q+S+   L  L  +  V  Y G D T  SLH GHL   M+L   Q+ 
Sbjct: 2   NILDELAWRGAINQVSDEEGLRKLLDKKSVGLYCGVDPTGDSLHIGHLIPFMMLKRFQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   ++GGGT  IGDPS +   R +   +++  N E +        K+  GK +  ++
Sbjct: 62  GHRAHIIIGGGTGSIGDPSGKKSERVLQTMEQVHHNEEALTKQM----KHLFGKDNITIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +  LR+ G  F+VN ML+ E V SRL  E  +SF EF Y ILQ+ DF  
Sbjct: 118 NNRDWLSKIDLLGFLRDYGKLFNVNTMLNKEVVASRL--EVGISFTEFTYQILQSIDFHH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L KN D +LQ+GG+DQWGNI  GIDL  +++    + +ALT PL+  A GTK GKT  GA
Sbjct: 176 LWKNNDVQLQIGGADQWGNITSGIDLIHKMEGSEAEAYALTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DV+ + K  T L   EI           E  EA++ +
Sbjct: 236 VWLDPEKTTPYEFYQFWLNQDDRDVIKYLKYFTFLSQEEIADLEEKVKTQPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGL 352
           A E    VHG+E  ++A   +   F   +            ++MP++ ++    +    +
Sbjct: 296 AEETVEFVHGKEAVKEAEHISAALFSGEVKDLTASEIEQGFKNMPSVEVT----AEPKNI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G  +S  +AR  + + AI+IN   I + +  I          + +  GKK + 
Sbjct: 352 VEWLVDTGIESSKRQAREDVTNGAIRINGDRIQDLEFTIDPSAEFDGKFVIVRRGKKKYF 411

Query: 413 ICHL 416
           +  +
Sbjct: 412 LARV 415


>gi|332685978|ref|YP_004455752.1| tyrosyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369987|dbj|BAK20943.1| tyrosyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 418

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 137/421 (32%), Positives = 218/421 (51%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q ++ + L     +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTDAQGLREQTEEASISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDSLTKQMLKLFGKDANVT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGA 244
           L K ++ +LQ+GG+DQWGNI  G+DL  +L+ P+  +F LT PL+  A GTK GKT  GA
Sbjct: 177 LYKTFNVQLQIGGADQWGNITAGLDLIRKLEGPETNVFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L  +EI+          E  EA++ +
Sbjct: 237 VWLDAKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQAEIEELAEKIKTNPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTLI 356
           A E+T  VH +EE  +A       F  +I   +   I      +   E+ S+   ++ ++
Sbjct: 297 AEEVTRFVHSQEELAEAQKITAALFSGNIKELNAQEIEQGFEKMPTVEISSKPENIVDML 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +      S  +AR  + + AI IN   +++ +  +          + +  GKK + +  +
Sbjct: 357 ISTKIEPSKRQAREDISNGAISINGDKVTDLEATVDPTSHFDGKFVVIRKGKKKYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 V 417


>gi|114319599|ref|YP_741282.1| tyrosyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225993|gb|ABI55792.1| tyrosyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 399

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 172/409 (42%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +      D L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 10  LLRRGAEEILLENELRDKLQYDRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEVY 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +E+++N    +      +          ++ N  W
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREEVRDNARTYEEQIFQVLDP----ERTQVVFNSDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +      D++  + S  +V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MNDFSAADMI-RLASHHTVARMLERDDFHKRYAARQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L +         LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLVGRELQKAYGQSPQTVLTMPLLEGLDGVQKMSKSLGNYVGIKEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITT 308
                  +    +I D  +  +   L+  P SEI+R+ +   +G+   + K  +A EI T
Sbjct: 241 ---AEEMFGKLMSISDDLMWRYFLLLSFRPESEIERLRRDVAEGRNPRDVKFELAEEIVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H    A +A    +  F      + MP  ++  D+   G+ L  L+  AG   ST++A
Sbjct: 298 RFHDARAAARAREVFIARFRKGAMPEEMPEHTLPADD--GGLALDRLLKGAGLVASTSDA 355

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR LK  A++I+   + +++L +               GK+      + 
Sbjct: 356 RRMLKQGAVRIDGERVEDQRLVVPA-----GETHVYQVGKRRFARVTVA 399


>gi|29375234|ref|NP_814387.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971094|ref|ZP_05421680.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255973706|ref|ZP_05424292.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617516|ref|ZP_05474362.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761406|ref|ZP_05501986.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256854506|ref|ZP_05559870.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis T8]
 gi|256957502|ref|ZP_05561673.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256959767|ref|ZP_05563938.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964581|ref|ZP_05568752.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257077509|ref|ZP_05571870.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257080876|ref|ZP_05575237.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257083566|ref|ZP_05577927.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257085990|ref|ZP_05580351.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257089063|ref|ZP_05583424.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257415205|ref|ZP_05592199.1| tyrosyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257418251|ref|ZP_05595245.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257420895|ref|ZP_05597885.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294780714|ref|ZP_06746075.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300861931|ref|ZP_07108011.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|81437350|sp|Q838D7|SYY1_ENTFA RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|29342693|gb|AAO80458.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962112|gb|EET94588.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255966578|gb|EET97200.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597043|gb|EEU16219.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682657|gb|EEU22352.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256710066|gb|EEU25110.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis T8]
 gi|256947998|gb|EEU64630.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256950263|gb|EEU66895.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256955077|gb|EEU71709.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256985539|gb|EEU72841.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256988906|gb|EEU76208.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256991596|gb|EEU78898.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256994020|gb|EEU81322.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256997875|gb|EEU84395.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257157033|gb|EEU86993.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257160079|gb|EEU90039.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162719|gb|EEU92679.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294452324|gb|EFG20765.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295114139|emb|CBL32776.1| tyrosyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300848456|gb|EFK76213.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|323479814|gb|ADX79253.1| tyrosyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 418

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 209/420 (49%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELAWRDAINQQTNEEGLRELTENTSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   + +Q N++ +              T   M+
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRTTERVLQTMEAVQHNVDSLSNQMKKLFGKDAEVT---MV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF  
Sbjct: 119 NNYDWLSELSLLDFLRDYGKNFNVNTMLAKDIVASRL--ESGISFTEFTYQILQSIDFYT 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K ++ +LQ+GG+DQWGNI  G+DL  + + P  K+F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKKHNIQLQIGGADQWGNITAGLDLIRKKEGPEAKVFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ + TSP+ F+Q+W N DD DV+ + K  T L   EID       +     EA++ +
Sbjct: 237 IWLDPKKTSPFEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDALAEKVEKEPGKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTLI 356
           A E+T  VH     E+A   +   F  +I    +  I      +   E+      ++  +
Sbjct: 297 AEEVTRFVHDDAALEEAQKISEALFSGNIKDLTIEEIEQGLEHVPTVEITKDAKNIVDWL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  +   AI IN   +++    +          + +  GKKN+ +  +
Sbjct: 357 VDTEIEPSKRQAREDVSGGAISINGDRVTDLDFAVDPTQHFDGKFVVVRKGKKNYFLAKV 416


>gi|323447669|gb|EGB03582.1| hypothetical protein AURANDRAFT_59618 [Aureococcus anophagefferens]
          Length = 385

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 171/394 (43%), Positives = 241/394 (61%), Gaps = 15/394 (3%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S G V AY+G+D TA SLH G L Q+M+L  LQK GH P+ L+GGGT+ +GDPS +DES
Sbjct: 1   MSGGPVAAYLGFDATADSLHVGSLLQIMILRLLQKHGHTPVVLVGGGTTKVGDPSGKDES 60

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R+++    I  NI  I  IF  F+ +G G   A+++NN  WL  + Y+  LRE GS FSV
Sbjct: 61  RKLLDDDAIAGNIAGISAIFDKFLDFGPG--GAVLVNNADWLDELAYVKFLREFGSHFSV 118

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           NRMLSFESV+ RL REQ LSFLEFNYMILQAYDFVELA+ YD +LQ+GGSDQWGNI+ G+
Sbjct: 119 NRMLSFESVKQRLGREQPLSFLEFNYMILQAYDFVELARRYDVKLQLGGSDQWGNIVSGV 178

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           +L  R+    L  LT+PL+ T+ G KMGKT  GA+WL+    +PY++WQ+WRN  D DVV
Sbjct: 179 ELARRVDRKSLVGLTAPLIATSDGRKMGKTAEGAVWLSPGKLAPYDYWQFWRNTVDDDVV 238

Query: 271 SFAKRLTTLPMSEIDRMAK-----LQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            F +  T  P+ E+D + +          +N AK+ +A   TT++HG +           
Sbjct: 239 RFTRMFTDAPLEEVDALERELAAAPDAAAVNAAKRRLADACTTLLHGADALPDIHATVDR 298

Query: 326 -CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                   +  +P +++   E    + ++  +V AGFA S +EA+R +K    +++ + +
Sbjct: 299 LFAGGGGSAASLPRVAVGDAE----ITVVDALVSAGFAKSKSEAKRLIKGGGARLDGAKV 354

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +    +     ++  ++KLS GKK H I  L G
Sbjct: 355 DDVDATVA---LEAGVDVKLSSGKKKHAILELAG 385


>gi|257900037|ref|ZP_05679690.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837949|gb|EEV63023.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 418

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 213/421 (50%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +      + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+          E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+S     ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|309973283|gb|ADO96484.1| Tyrosyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 395

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANVAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|83319274|ref|YP_424607.1| tyrosyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|97201592|sp|Q2SRK6|SYY_MYCCT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83283160|gb|ABC01092.1| tyrosyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 414

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 226/422 (53%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++ L  L  RG I Q++N +++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNNILEELKWRGLIKQVTNEQKILDAQNSND-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G KPI+L+GG T +IGDPSF+   R +   Q++  NI KI       I         
Sbjct: 60  ALQGFKPIALIGGATGMIGDPSFKASERVLQTKQQVDHNINKISTQLKEIIP------TV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN  WL  I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQA+D
Sbjct: 114 SFVNNRDWLEDISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAFD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L KN DC +Q+GGSDQWGNI  GID          K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNDCSVQIGGSDQWGNITSGIDFISDTINKNNKASGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +I+++ K   ++   +  +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDEDSINLLKCLTFLTKDQIEQLIKQHNQQPAKHFLQ 291

Query: 300 KIIATEITTMVHGREEAEKA-----ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA     A  + + F ++     M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTDDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+   A+S  EAR  LK+ AI INN +I +E L I   D      + +  GKK + + 
Sbjct: 352 ALVELKVASSKREAREFLKNKAILINNQVIEDENLVISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LV 413


>gi|90020735|ref|YP_526562.1| tyrosyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|89950335|gb|ABD80350.1| tyrosyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 434

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 157/435 (36%), Positives = 224/435 (51%), Gaps = 19/435 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG I Q++   +L    S    T Y G+D TA SLH G L  L+ L
Sbjct: 1   MSGVDTGLLADLEARGLIAQMTGDDQLAEHLSTSR-TLYCGFDPTADSLHIGSLVPLLTL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   S FI + +G+
Sbjct: 60  KRFQMAGHKPLALVGGATGLIGDPSFKAQERKLNTPDIVAGWVDKLKAQVSQFIDFDSGE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+ S+  +D LR++G  FS+N M+  ESV+ R+ RE   +SF EF YMIL
Sbjct: 120 NVAEVVNNLDWIGSVNVLDFLRDVGKHFSINNMIQKESVKQRIDREGAGISFTEFTYMIL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL K  +C LQ+GGSDQWGNI  GIDL  R+ + + F LT PL+T + GTK GK
Sbjct: 180 QSYDFAELYKQNNCTLQIGGSDQWGNITGGIDLARRMYSGQTFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL+   TSPY F+Q+W N  DADV  F +  T L   EID +           +
Sbjct: 240 TESGTIWLDPSKTSPYAFYQFWLNSADADVYKFLRYFTFLTPKEIDDIEAADAAAQGRPQ 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRG-- 349
           A+ I+A E+T +VHG E    A       F+           + +    +   ++  G  
Sbjct: 300 AQGILAKEVTRLVHGEEGLVAAERITACMFNGTLADLSETDLEQLKLDGLPASDLDVGAI 359

Query: 350 --MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTGNI 402
               L TL+   G A +  E +  L  NA+ IN      E           +        
Sbjct: 360 GDTPLTTLLTDCGMAKAGREVKDALGRNAVLINGEAKGAEHNMQAAECFAKEHALFGRFF 419

Query: 403 KLSFGKKNHIICHLC 417
            +  GKK + +  + 
Sbjct: 420 LVKLGKKKNHLFEIV 434


>gi|147817232|emb|CAN64191.1| hypothetical protein VITISV_016956 [Vitis vinifera]
          Length = 868

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 150/424 (35%), Positives = 231/424 (54%), Gaps = 19/424 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 54  IPLHRSNVIEILEQRGLVDSITSP-ILRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 112

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---G 117
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +      
Sbjct: 113 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTTN 172

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G    ++LNN  W      +D L+++G +  V  M++ ESV+ RL+ EQ +S+ EF Y 
Sbjct: 173 GGDDSFVVLNNYDWWKEFTLLDFLKKVGRYARVGTMMAKESVKKRLESEQGMSYTEFTYQ 232

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTK 236
           +LQ YDF+ L +N    +Q GGSDQWGNI  G +L  ++      + LT PLL  + GTK
Sbjct: 233 LLQGYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTK 292

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGK 293
            GK+  GAIWL+  M SPY F+QY+ ++ DADVV F K LT L M EI   +   +    
Sbjct: 293 FGKSEDGAIWLSPAMLSPYKFYQYFFSVPDADVVRFLKILTFLDMDEIMELEVKMRSPSY 352

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAM----------ECFDMSIHSQHMPTISISK 343
             N A++ +A E T  VHG+E  ++A  A            +   +   ++ +P+ S+S 
Sbjct: 353 VPNTAQRRLAEEATRFVHGQEGLDEALKATEALRPGAETKLDWKTIEGIAKDVPSCSLSY 412

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           DEV   + LL L +  G   S + ARR LK   + +NN+ I +E  +I+ +D      + 
Sbjct: 413 DEV-LNLSLLDLSISTGLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLL 471

Query: 404 LSFG 407
           LS G
Sbjct: 472 LSAG 475


>gi|227551041|ref|ZP_03981090.1| tyrosine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257896666|ref|ZP_05676319.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|227179820|gb|EEI60792.1| tyrosine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833231|gb|EEV59652.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 418

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 213/421 (50%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVSSRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +      + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+          E  EA++ +
Sbjct: 237 IWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+S     ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|257888920|ref|ZP_05668573.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|293378453|ref|ZP_06624617.1| tyrosine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257824976|gb|EEV51906.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|292642917|gb|EFF61063.1| tyrosine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 418

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 213/421 (50%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +      + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+          E  EA++ +
Sbjct: 237 IWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+S     ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|260558538|ref|ZP_05830734.1| tyrosyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206885|ref|ZP_05921576.1| tyrosyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565698|ref|ZP_06446143.1| tyrosyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294613986|ref|ZP_06693918.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|260075712|gb|EEW64018.1| tyrosyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079015|gb|EEW66715.1| tyrosyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162556|gb|EFD10411.1| tyrosyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291593180|gb|EFF24757.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 418

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 213/421 (50%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +      + F LT PL+  A GTK GKT  GA
Sbjct: 177 LYKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+          E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+S     ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|251792712|ref|YP_003007438.1| tyrosyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534105|gb|ACS97351.1| tyrosyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 395

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDMNT-VLTELK-RGVDEILSEQDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTRIEFNSDWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GHDSVAL----EADIELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +L   I +N+    P   +    +I D  +  +   L+  P++EI ++ +         +
Sbjct: 230 SLGNYIGVNEA---PGEMFGKIMSISDDLMWDWYNLLSFRPLTEIAQLKEDVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    A+ A    +  F        MP  +         +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHDEAAADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +KI+   + + +L I               GK+      +
Sbjct: 342 EAGLVASTSEANRMVQQGGVKIDGEKVEDARLVITAS------TAVYQVGKRKFAKVTV 394


>gi|293572271|ref|ZP_06683270.1| tyrosyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607730|gb|EFF37053.1| tyrosyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 418

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 213/421 (50%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +      + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGSEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+          E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+S     ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|260914249|ref|ZP_05920722.1| tyrosine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631882|gb|EEX50060.1| tyrosine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 395

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 181/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGVDEVLSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQFGHEVIFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNAETYKQQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTRIVFNSSWLGELGT-EGMIRLTSNYTVARMLERDDFKKRFANNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----EADIELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P   +    +I D  +  +   L+  P++EI+  +     G+   +
Sbjct: 230 SLGNYIGVTE---TPSEMFGKIMSISDDLMWDWYNLLSFRPLTEIEQLKQEVENGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI +  H   +AE A    +  F        MP  +         MGL  L+ 
Sbjct: 287 VKVLLAKEIISRFHSNTDAEAAEQEFINRFQKGAIPDEMPEFT-----FEGEMGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R ++   +KI+   + + KL I        G      GK+      +
Sbjct: 342 EASLVVSTSEANRMVQQGGVKIDGHKVEDAKLIIST------GTSVYQVGKRKFARVTI 394


>gi|309803428|ref|ZP_07697523.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|312871028|ref|ZP_07731130.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872057|ref|ZP_07732132.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312873438|ref|ZP_07733488.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|325911290|ref|ZP_08173703.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325913559|ref|ZP_08175924.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|329920834|ref|ZP_08277421.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308164592|gb|EFO66844.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|311090947|gb|EFQ49341.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092350|gb|EFQ50719.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093356|gb|EFQ51698.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|325476850|gb|EGC80003.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325477138|gb|EGC80285.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|328935614|gb|EGG32081.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 417

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 142/412 (34%), Positives = 205/412 (49%), Gaps = 17/412 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRRNEKSLTAQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRL--ATGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTL 355
           +A E+T  VHG      A       F+ +I    +  I          E+      L+ L
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKDLSVKQIEQGFKNAPYVEISKESKNLVDL 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+ G   S  +AR  + + AI +N +   +    + + +      + +  G
Sbjct: 356 LVETGIEKSKRQAREDINNGAIYVNGTRQDDCDFLVDVPNSFEGKFVIIRRG 407


>gi|293568442|ref|ZP_06679762.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294619407|ref|ZP_06698864.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|314939923|ref|ZP_07847126.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314941532|ref|ZP_07848419.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314953825|ref|ZP_07856688.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993583|ref|ZP_07858938.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997778|ref|ZP_07862691.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|291588778|gb|EFF20606.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291594359|gb|EFF25779.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|313588222|gb|EFR67067.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591960|gb|EFR70805.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313594160|gb|EFR73005.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599684|gb|EFR78527.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640837|gb|EFS05417.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 418

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 217/421 (51%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+ P++  F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEVEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+          E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+S     ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|227432816|ref|ZP_03914776.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351430|gb|EEJ41696.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 417

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 136/423 (32%), Positives = 208/423 (49%), Gaps = 17/423 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   
Sbjct: 1   MAMNFIEDLKWRGALNQVTDEAGLIEAMASGEIGAYVGTDPTADSLHLGHLIPFMVLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G K + ++GG T  IGDP      R+++  +++++N + I    +       G    
Sbjct: 61  QNAGGKAVIIIGGATGAIGDPRP-TTERQLLSPEQLRQNEKGITEQVTKLF----GDEKT 115

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y ILQ  D
Sbjct: 116 AIVNNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQILQGID 173

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTL 241
           + EL + ++ +LQ+GGSDQWGNI  GIDL           F LT PL+T +SG K GK+ 
Sbjct: 174 YHELWRRHNVQLQIGGSDQWGNITSGIDLIHSIEGNNATAFGLTIPLMTDSSGKKFGKSE 233

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAK 299
             AIWLN E TSPY F+Q+W N  D DVV + K  T L + EI+              A+
Sbjct: 234 GNAIWLNPEKTSPYTFYQFWYNQSDEDVVKYLKYFTFLGVDEINNLEQEAKNNPGGRIAQ 293

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLL 353
           K +A E+T  VHG +    A   +   F   + +     I+     +   ++ S    ++
Sbjct: 294 KRLAQEVTKFVHGEQAVADAEKLSAALFSGDVANLSAADIADAFGGVPSFDITSEKKNVV 353

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  + + AI I+   +++   +I          + +  GKK + +
Sbjct: 354 DFLVDGEIEKSKRQAREDVTNGAITISGEKVTDVNFEIDPTKHYDGEFVLVRRGKKKYFL 413

Query: 414 CHL 416
             +
Sbjct: 414 GKV 416


>gi|69244479|ref|ZP_00602895.1| Tyrosyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257879015|ref|ZP_05658668.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881639|ref|ZP_05661292.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257886270|ref|ZP_05665923.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257890867|ref|ZP_05670520.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|258615352|ref|ZP_05713122.1| tyrosyl-tRNA synthetase [Enterococcus faecium DO]
 gi|293557049|ref|ZP_06675609.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293562866|ref|ZP_06677338.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294622700|ref|ZP_06701659.1| tyrosyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950252|ref|ZP_07853535.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|68196420|gb|EAN10848.1| Tyrosyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257813243|gb|EEV42001.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817297|gb|EEV44625.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257822126|gb|EEV49256.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257827227|gb|EEV53853.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|291597838|gb|EFF28971.1| tyrosyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291600869|gb|EFF31161.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605190|gb|EFF34652.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313643391|gb|EFS07971.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 418

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 213/421 (50%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +      + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+          E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+S     ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|260582183|ref|ZP_05849977.1| tyrosyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094815|gb|EEW78709.1| tyrosyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 395

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  + ++   L+  P++EI   +    +GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWNWYNLLSFRPLNEIAQLKSEVEKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEETANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|221133486|ref|ZP_03559791.1| tyrosyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 399

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 102/420 (24%), Positives = 182/420 (43%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +++ F  I  +RG    +     +  L     +    G+D TA  LH GH   +  L
Sbjct: 1   MSDWQNAFNEI--KRGADEILIEDELIARLKEGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RTFQQLGHEVIFLIGDFTGLIGDPTGKNVTRKPLSKEDVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+        + ++ +  +V RML  +  + R    Q ++  EF Y ++Q
Sbjct: 116 -KTTVRFNSEWM-DALGAAGMIKLAASQTVARMLERDDFKKRYGNNQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +     +   L  PLL       KM K
Sbjct: 174 GWDSVAL----ESDVELGGTDQRFNLLMGRELQKSQGQRQQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L+  I +     +P + +    +I D  +  +   L+  P++EID  + A   G    +
Sbjct: 230 SLNNYIGIT---DAPNDMFGKIMSISDDLMWRYFDLLSFRPIAEIDALKAAVEGGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    ++ F  +     MP +++  +     MG+  L+ 
Sbjct: 287 TKIELAKEIIARFHDDAAAEGAHQDFIQRFQKNAIPDDMPEVTVHLE--GEAMGIANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            A    ST++A R +K  A+KIN   + + KLQ+  +     G      GK+      L 
Sbjct: 345 AANLVNSTSDAMRMIKQGAVKINGDKVEDTKLQLSEK-----GEAVYQVGKRKFARITLA 399


>gi|52425287|ref|YP_088424.1| tyrosyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81387049|sp|Q65T71|SYY_MANSM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52307339|gb|AAU37839.1| TyrS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 395

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSDI-NVVLAELK-RGVDEVLSEADLIEKLKENRPLKIKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T ++GDPS ++++R  +  +++  N E  K      +      
Sbjct: 59  RQFQNFGHEVIFLIGDFTGMVGDPSGKNKTRPPLSREDVLRNAETYKQQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R   +Q ++  EF Y +LQ
Sbjct: 116 -KTRIVFNSDWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFTEKQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GHDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +L   I +     +P + +    +I D  +  +   L+  P++EI +       G+   +
Sbjct: 230 SLGNYIGVT---DAPNDMFGKIMSISDDLMWDWYDLLSFRPLTEIAQFKEEVKNGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADTAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++ + +KI+   + + K  I               GK+      +
Sbjct: 342 EAGLVASTSEANRMVQQDGVKIDGEKVEDAKTTISAS------THVYQVGKRKFARVTV 394


>gi|222099167|ref|YP_002533735.1| Tyrosyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221571557|gb|ACM22369.1| Tyrosyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 394

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 104/410 (25%), Positives = 180/410 (43%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL  R  +  +S    LD +  +G +   +G D +   LH GH   L  L   Q  GH
Sbjct: 7   VKILK-RNVVDLVSEEELLDRIRRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDPS R+E+R M+  +E+ EN +  +      +          +  N
Sbjct: 66  TVVLIIGDFTARIGDPSGRNETRPMLTKEEVLENAKTYQEQAFKILDP----ERTELRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL        +  + S ++V RML  +    R +    ++  EF Y + QAYD V + 
Sbjct: 122 GEWL-DRMTFADVIVLASKYTVARMLERDDFARRFREGIPITISEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G  + E         +T P++  T    KM K+    I  
Sbjct: 181 ----ADVELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIAT 304
           N    +P + +    +I D  ++ + + LT +P   + E +R  K       + K ++A 
Sbjct: 237 N---DTPEDMYGKLMSIPDELIIKYMRLLTDIPEEQIEEYERKMKEGKINPRDVKMVLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A+KA    ++ F        MP + +S++     M ++ L+VK G  +S
Sbjct: 294 EITRFFHGEENAKKAQEHFVKVFQRKELPDEMPVVELSQE-----MNIVDLLVKIGAVSS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EA+R +    + ++   + + K  +K       G   L  GKK     
Sbjct: 349 RSEAKRLISQGGVYLDGERVEDIKFIVKP-----DGERVLRVGKKKFYRI 393


>gi|194467546|ref|ZP_03073533.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454582|gb|EDX43479.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 416

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 225/420 (53%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTLI 356
           A E+T  VHG+E  E+A   +   F   +       I      +   +V  +   ++  +
Sbjct: 296 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSAAEIEQGFKNMPSVDVENKKENIVVWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S  +AR+ + S AI+IN   + +   +I  Q       + +  GKK++ +  +
Sbjct: 356 TDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFDGKFVIVRKGKKHYYLARV 415


>gi|239995870|ref|ZP_04716394.1| tyrosyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 399

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 179/412 (43%), Gaps = 23/412 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     ++ L S   +T   G+D TA  LH GH   +  L   Q+ GH
Sbjct: 8   LAEIK-RGVDEILPEEDLIEKLKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQQLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K + L+G  T +IGDP+ ++ +R+ +  +++ EN +  +      +          +  N
Sbjct: 67  KVVFLIGDFTGLIGDPTGKNVTRKPLSKEQVLENAKTYQEQVFKILDED----KTEIRFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+        + ++ +  +V RML  +  + R    Q ++  EF Y ++Q +D V L 
Sbjct: 123 SEWM-DGLGAAGMIKLAASQTVARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDSVAL- 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +     +   +  PLL       KM K+L+  I +
Sbjct: 181 ---ESDVELGGTDQRFNLLMGRELQKEQGQKQQSIVMVPLLEGLDGVQKMSKSLNNYIGI 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI  +           + K ++A E
Sbjct: 238 T---DAPNDMFGKVMSISDDLMWRYYDLLSFRPLEEIAELKTRVANGENPRDIKIMLAKE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H    AE A    ++ F  +     MP + I+  +   G+ +  L+ +A    ST
Sbjct: 295 IIARFHDDAAAEGAHQDFIQRFQKNAIPDDMPELEIALSD--EGIAIGNLLKEANLVGST 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++A R +K  A+KIN   + + +L I  +     G      GK+      L 
Sbjct: 353 SDAMRMIKQGAVKINGDKVEDTRLVITEK-----GENVYQVGKRKFARITLA 399


>gi|326427881|gb|EGD73451.1| tyrosyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 459

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 142/445 (31%), Positives = 234/445 (52%), Gaps = 37/445 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L ERG +   ++  EL  LC +  +T Y G+D TA +LH G+L  +M L    + G
Sbjct: 16  FVGTLEERGLLKDSTS-DELRTLCEKEQLTVYCGFDPTARTLHIGNLLAIMGLVHCVRAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD----- 122
           H  I+L+GG T+ IGDPS R   R  +   E+  NI  I  +    +             
Sbjct: 75  HNVIALVGGATARIGDPSGRSTERTCLPEAELDANIAGITEVLHRILDNAQQYEASTEPT 134

Query: 123 ----------------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                             ++NN  W    + ID + +IG  F VN ML+ +SV+SR++ +
Sbjct: 135 AQKSASATAATGAAPSVKVVNNAEWYDEWRVIDFIADIGRHFRVNSMLAKDSVKSRMEHD 194

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           + +SF EF Y +LQ +DF++L K ++CR+Q+GGSDQWGNI  GIDL  R+    ++ +T 
Sbjct: 195 EGISFTEFTYQVLQGHDFLQLFKAHNCRVQLGGSDQWGNITAGIDLVRRVTGKSVYGVTM 254

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           PLLTT++G K GK+   A+WL+ ++TSPY  +Q++ N+ DADV  +   LT LP+S I +
Sbjct: 255 PLLTTSTGEKFGKSAGNAVWLDAQLTSPYELYQFFINMADADVERYLAALTLLPVSTIKQ 314

Query: 287 MAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHS 333
           + +   ++ +E  A+  +A+E+  +VHG    ++A TA    F                 
Sbjct: 315 VMEQHIQQPHERLAQHKLASEVVRLVHGAAAVDEAKTATDALFAHGSLDNVSAATLKAMF 374

Query: 334 QHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              P+ ++ +  ++ G   +L+  V+AG  +S  EA+R LK+  + +NN+ +      + 
Sbjct: 375 ATAPSATLDRALITAGTTSILSAAVQAGLFSSKGEAKRTLKAGGLYVNNNRVE-RDAPLT 433

Query: 393 LQDFDSTGNIKLSFGKKNHIICHLC 417
            +   +     L  G+K+++I H  
Sbjct: 434 SEHVLADALTVLRKGRKHYLIIHWS 458


>gi|332142558|ref|YP_004428296.1| tyrosyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552580|gb|AEA99298.1| tyrosyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 399

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 95/412 (23%), Positives = 180/412 (43%), Gaps = 23/412 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     ++ L S   +T   G+D TA  LH GH   +  L   Q+ GH
Sbjct: 8   LAEIK-RGVDEILPEEDLIEKLKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQQLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K + L+G  T +IGDP+ ++ +R+ +  +++ EN +  +      +     +    +  N
Sbjct: 67  KVVFLIGDFTGLIGDPTGKNVTRKPLSKEQVLENAKTYQEQVFKILD----EEKTEIRFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+        + ++ +  +V RML  +  + R    Q ++  EF Y ++Q +D V L 
Sbjct: 123 SEWM-DGLGAAGMIKLAASQTVARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDSVAL- 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +     +   +  PLL       KM K+L+  I +
Sbjct: 181 ---ESDVELGGTDQRFNLLMGRELQKEQGQKQQSIVMVPLLEGLDGVQKMSKSLNNYIGI 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
                +P   +    +I D  +  +   ++  P+ EI  +       +   + K ++A E
Sbjct: 238 T---DTPNEMFGKVMSISDDLMWRYYDLVSFRPLEEIAELKARVEGGENPRDIKIMLAKE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H    AE A    ++ F  +     MP + I+  +   G+ +  L+ +A    ST
Sbjct: 295 IIARFHDDAAAEGAHQDFIQRFQKNAIPDDMPELEIALSD--EGIAIGNLLKEAKLVGST 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++A R +K  A+KIN   + + +L I  +     G      GK+      L 
Sbjct: 353 SDAMRMIKQGAVKINGDKVEDTRLVITEK-----GENVYQVGKRKFARITLA 399


>gi|319937189|ref|ZP_08011596.1| tyrosyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807555|gb|EFW04148.1| tyrosyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 408

 Score =  324 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 135/415 (32%), Positives = 214/415 (51%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  ++   + G +T YIG D T  SLH GH +  ++   L+  G
Sbjct: 3   IYDELVWRGLIKDVSSPE-VEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP   D  R M+  +++Q N + +K        +        ++N
Sbjct: 62  HNPILLVGGATGLIGDPKP-DTERPMITREQVQHNFDCLKKQAQDLFGF-------EVVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +ID LR+ G +F+VN ML+ + V+ RL  +  +++ EF+YMI+QA DF  L
Sbjct: 114 NYDWSKDLNFIDFLRDYGKYFNVNYMLNKDIVKRRL--DLGITYTEFSYMIMQAMDFYWL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N DC +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 172 YENKDCHMQVAGQDQWGNITAGIELIRKKSGKEAYGFTMPLLTKSDGTKFGKTNGHAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATE 305
           ++E TSPY  +Q++ N +D  V+ + K LT L     E           + EA K +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDEKVIDYLKFLTFLSKEEIEELEEKNKTQPHLREAHKALAKE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T VH     E+A   +   F   I +  +  +      +   E+     +L  +V+ G
Sbjct: 292 VITFVHDEAAYEEALEISQMLFSGKIQTLTLAQVQSCFNGVPSIEMEEDTKILNALVQVG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EAR+ +   ++ IN   +++ +  IK ++        +  GKKN+ + +
Sbjct: 352 AASSNREARQFVTGGSVLINGEKVTDVEFVIKKENAFGKEATVIRRGKKNYYVIN 406


>gi|297182713|gb|ADI18869.1| tyrosyl-tRNA synthetase [uncultured Pseudomonadales bacterium
           HF0010_05E14]
          Length = 433

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 155/435 (35%), Positives = 230/435 (52%), Gaps = 22/435 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M      F+S L  RG I+Q S   +L+   +    T Y G+D TA SLH GHL  L++L
Sbjct: 1   MEINGKKFISSLESRGLIYQKSGSDDLEEHLNSER-TVYCGFDPTADSLHLGHLVPLLML 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T +IGDPSF+   R++  ++ +++   KI     + I      
Sbjct: 60  KRFQLAGHKPIALVGGATGLIGDPSFKATERKLHSAEIVEQWALKITSQIENLINVD-EL 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
               ++NN +WL  IK +D LR+IG +FS+N +++ ESV+ R++RE + +S+ EF+Y ++
Sbjct: 119 KSVSIINNASWLSEIKMLDFLRDIGKYFSINNLIAKESVKKRIEREGEGISYTEFSYSLV 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA DF +L K  DC +Q+GGSDQWGNI+ GI+L  R    + F +T PL+T + GTK GK
Sbjct: 179 QALDFAQLYKQVDCTIQVGGSDQWGNIVSGIELNRRESKTQCFGITVPLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-- 297
           T SG++WL+ + TSPY F+Q+W  ++D DV  F    T L    I ++        N+  
Sbjct: 239 TESGSVWLDSKKTSPYMFYQFWLRVEDEDVYKFLNFFTFLSEEYIQQVKINDESSKNKPI 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
           A+ I+A E+T  VHG+E  + A       F  S  +             +P + +   + 
Sbjct: 299 AQSILAEEVTRFVHGQEHLDAAKRITNALFSNSAENLLQGDFKQLALDGLPHVILGDAD- 357

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----NEKLQIKLQDFDSTGN 401
              + L  LIV AG   S  E +  LK  AI IN  I+S     N               
Sbjct: 358 KSSLSLSKLIVDAGITKSGREVKDALKRGAISINGKIVSPEDGFNMDSLFAKDHSQYDNY 417

Query: 402 IKLSFGKKNHIICHL 416
             +  GKK H++  L
Sbjct: 418 FLIKVGKKKHLLVSL 432


>gi|148543387|ref|YP_001270757.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|254783612|sp|A5VHU6|SYY_LACRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148530421|gb|ABQ82420.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
          Length = 416

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 227/420 (54%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTLI 356
           A E+T  VHG+E  E+A   +   F   +    +  I      +   +V  +   ++  +
Sbjct: 296 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSVAEIEQGFKNMPSVDVENKKENIIIWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S  +AR+ + S AI+IN   + +   +I  Q   +   + +  GKK++ +  +
Sbjct: 356 TDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFAGKFVIVRKGKKHYYLARV 415


>gi|116619116|ref|YP_819487.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122270684|sp|Q03UK8|SYY_LEUMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116097963|gb|ABJ63114.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 415

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 136/420 (32%), Positives = 208/420 (49%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQVTDEAGLIEAMASGEIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++++N + I    +       G     ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRP-TTERQLLSPEQLRQNEKGITEQVTKLF----GDEKTAIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y ILQ  D+ E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQILQGIDYHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L + ++ +LQ+GGSDQWGNI  GIDL           F LT PL+T +SG K GK+   A
Sbjct: 175 LWRRHNVQLQIGGSDQWGNITSGIDLIHSIEGNNATAFGLTIPLMTDSSGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWLN E TSPY F+Q+W N  D DVV + K  T L + EI+              A+K +
Sbjct: 235 IWLNPEKTSPYTFYQFWYNQSDEDVVKYLKYFTFLGVDEINNLEQEAKNNPGGRIAQKRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTLI 356
           A E+T  VHG +    A   +   F   + +     I+     +   ++ S    ++  +
Sbjct: 295 AQEVTKFVHGEQAVADAEKLSAALFSGDVANLSAADIADAFGGVPSFDITSEKKNVVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI I+   +++   +I          + +  GKK + +  +
Sbjct: 355 VDGEVEKSKRQAREDVTNGAITISGEKVTDVNFEIDPTKHYDGEFVLVRRGKKKYFLGKV 414


>gi|184152797|ref|YP_001841138.1| tyrosyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364462|ref|ZP_03848552.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325683661|ref|ZP_08163177.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|183224141|dbj|BAG24658.1| tyrosyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070555|gb|EEI08888.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324978011|gb|EGC14962.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 420

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 227/420 (54%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 6   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +            G  +  ++
Sbjct: 66  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 180 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 240 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTLI 356
           A E+T  VHG+E  E+A   +   F   +    +  I      +   +V  +   ++  +
Sbjct: 300 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSVAEIEQGFKNMPSVDVENKKENIIIWL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S  +AR+ + S AI+IN   + +   +I  Q   +   + +  GKK++ +  +
Sbjct: 360 TDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFAGKFVIVRKGKKHYYLARV 419


>gi|15643244|ref|NP_228288.1| tyrosyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|81553099|sp|Q9WYU8|SYY_THEMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|4980991|gb|AAD35566.1|AE001725_11 tyrosyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 401

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 106/410 (25%), Positives = 180/410 (43%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL  R  +  IS    LD +  +G +   +G D +   LH GH   L  L   Q  GH
Sbjct: 7   VKILK-RNVVDLISEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDPS R+E+R M+  +E+ EN +  +      +          +  N
Sbjct: 66  TVVLIIGDFTARIGDPSGRNETRPMLTKEEVLENAKTYQEQAFKILDPK----RTELRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL        +  + S ++V RML  +    R K    ++  EF Y + QAYD V + 
Sbjct: 122 GEWL-DRMTFADVIILASKYTVARMLERDDFAKRFKEGIPIAISEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G  + E         +T P++  T    KM K+    I  
Sbjct: 181 ----SDVELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIAT 304
           N     P   +    +I D  ++ + + LT +P   + E +R  K +     + K ++A 
Sbjct: 237 N---DPPEEMYGKLMSIPDELIIKYMRLLTDIPEERIEEYERKMKEKTINPRDVKMVLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A+KA    ++ F        MP + IS+++      ++ L+V+ G A+S
Sbjct: 294 EITRFFHGEENAKKAQEHFVKVFQKKEIPDEMPVVEISQEK-----NIVDLLVEIGAASS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EA+R +    + I+   I + K  ++       G   L  GK+     
Sbjct: 349 KSEAKRLVSQGGVYIDGERIEDIKFTVEP-----DGERVLRVGKRKFYRI 393


>gi|54307738|ref|YP_128758.1| tyrosyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400172|sp|Q6LUR9|SYY_PHOPR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46912161|emb|CAG18956.1| putative tyrosyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 395

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +     I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEQALAEI--KRGIDELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +   + +  + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 116 -KTKIEFNSTWLSELGA-EGMIRLASNQTVARMLERDDFKKRYNGGRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + ++ + L+  P+ EI++  +         +
Sbjct: 230 SAHNYIGVSEV---PTEMFGKIMSISDDLMWNYFECLSFRPLEEIEQFKQDMANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP +     E   G+ +  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPEEMPEL-----EFEAGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R ++    KI+ + I + KL          G      GK+      L
Sbjct: 342 DAGLVNSTSDAMRMIRQGGAKIDGNKIEDTKLIPAA------GTAVYQVGKRKFARITL 394


>gi|242076048|ref|XP_002447960.1| hypothetical protein SORBIDRAFT_06g018870 [Sorghum bicolor]
 gi|241939143|gb|EES12288.1| hypothetical protein SORBIDRAFT_06g018870 [Sorghum bicolor]
          Length = 521

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 142/447 (31%), Positives = 218/447 (48%), Gaps = 40/447 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            + +L +RG +   ++          G +  Y G+D TA SLH G+L  L+ L W ++ G
Sbjct: 78  VVDVLMKRGLVEATTSEAL--AAARPGELKVYCGFDPTAESLHLGNLLGLVALSWFRRCG 135

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------------- 114
           H  ++L+GG T  +GDPS +   R  +    ++ N + IK + +  +             
Sbjct: 136 HTAVALIGGATGRVGDPSGKSSERPELDIAAVEANSDAIKSLVAQILGRVPEPAHHSHSG 195

Query: 115 ----------KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
                              ++L+N  W   I  +D LRE+G F  V  M++ ESV+ RL 
Sbjct: 196 QKEQPSAISADSSQRMGSFVILDNYDWWKEITLLDFLREVGRFARVGSMIAKESVKKRLA 255

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFA 223
            E  +S+ EF Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G +L  ++   +    
Sbjct: 256 SEDGMSYTEFTYQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTELIRKILQVEGAHG 315

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+  + D DV+ F K LT L + E
Sbjct: 316 LTFPLLLKSDGTKFGKTEDGAIWLSSKMLSPYKFYQYFFAVPDIDVIRFMKILTFLSLDE 375

Query: 284 IDR---MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM----------S 330
           I+      K  G   N  +K +A E+T  VHG E  E+A  A                  
Sbjct: 376 IEELEDSMKKPGYVPNTVQKRLAEEVTRFVHGEEGLEEALKATEALRPGAQTQLDAQTIE 435

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             +  +P+ S++ D+V +   L+ L V  G  TS +  +R +K   + +NN  I +E   
Sbjct: 436 GIADDVPSCSLAYDQVFKS-PLVDLAVSTGLLTSKSAVKRLIKQGGLYLNNVRIDSEDKL 494

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  D      + LS GKKN ++  + 
Sbjct: 495 VEDGDIVDGKVLLLSAGKKNKMVVRIS 521


>gi|325848870|ref|ZP_08170380.1| tyrosine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480514|gb|EGC83576.1| tyrosine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 421

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 158/397 (39%), Positives = 243/397 (61%), Gaps = 9/397 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 11  SVFDELKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNY 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT----D 122
           GH+PI+L+GGGT++IGDPS R + R +M  + I  N +     F  F+++          
Sbjct: 71  GHRPIALLGGGTTMIGDPSGRSDMRMVMTKERIDHNADCFYKQFQRFLEFENDGEDSGDK 130

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M+NN  WL ++ ++D LR++GS F VN ML  ++ ++R+  E+ L+F EF+YM+LQ+Y
Sbjct: 131 AIMVNNGDWLLNLPFVDFLRDVGSNFLVNEMLKKDAYKNRM--EKGLTFFEFSYMLLQSY 188

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  
Sbjct: 189 DFLELFRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDEKVYGMTFKLLTTADGVKMGKSQK 248

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG-KEINEAKKI 301
           GA+WL+++ TS Y  +QY RN+DD DV  F   LT LP  E  R+   +  KEIN AK++
Sbjct: 249 GAVWLDEKKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTDECRRLGNGKDAKEINHAKEV 308

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EIT ++HG E+A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G 
Sbjct: 309 LAYEITKLIHGEEKAKEALEASKALFSGAGDESAMPTTEIEKEEL--PMGILTLLTKLGL 366

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             S ++AR  +K   + IN+  I++ + +I  + F+ 
Sbjct: 367 TKSNSQARDSVKGGGVSINDEKITDPRFEINEELFED 403


>gi|226491732|ref|NP_001141566.1| hypothetical protein LOC100273682 [Zea mays]
 gi|194705090|gb|ACF86629.1| unknown [Zea mays]
          Length = 496

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 144/447 (32%), Positives = 219/447 (48%), Gaps = 40/447 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            + +L +RG +  I++          G +  Y G+D TA SLH G+L  L+ L W ++ G
Sbjct: 53  VVDVLMKRGLVEAITSEAL--AAARPGELKVYCGFDPTAESLHLGNLLGLVALSWFRRCG 110

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------------- 114
           H  ++L+GG T  +GDPS +   R  +    ++ N + IK + +  +             
Sbjct: 111 HTAVALIGGATGRVGDPSGKSSERPELGIAAVEGNSDAIKSLVAQILGRVPEPAHRSHSG 170

Query: 115 ----------KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
                              L+L+N  W   I  +D LRE+G F  V  M++ ESV+ RL 
Sbjct: 171 QKELSLDNSANSSQTMGSFLILDNYDWWKDITLLDFLREVGRFARVGTMIAKESVKKRLA 230

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFA 223
            E  +S+ EF Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G +L  ++   +    
Sbjct: 231 SEDGMSYTEFTYQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTELIRKILQVEGAHG 290

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+  + D DV+ F K LT L + E
Sbjct: 291 LTFPLLLKSDGTKFGKTEDGAIWLSSKMLSPYKFYQYFFAVPDIDVIRFMKILTFLSLDE 350

Query: 284 I---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM----------S 330
           I   +   K  G   N  +K +A E+T  VHG E  E+A  A                  
Sbjct: 351 ILELEDSMKKPGYVPNTVQKRLAEEVTRFVHGEEGLEEALKATEALRPGAQTQLDAQTIE 410

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             +  +P+ S++ D+V +   L+ L V  G  TS +  +R +K   + +NN  I +E   
Sbjct: 411 GIADDVPSCSLAYDQVFKS-PLIDLAVSTGLLTSKSAVKRLIKQGGLYLNNVRIDSEDKL 469

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  D      + LS GKKN ++  + 
Sbjct: 470 VEEGDIVDGKVLLLSAGKKNKMVVRIS 496


>gi|222475570|ref|YP_002563987.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Florida]
 gi|222419708|gb|ACM49731.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Florida]
          Length = 435

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 182/418 (43%), Positives = 264/418 (63%), Gaps = 7/418 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +  FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++
Sbjct: 21  LMEFKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVM 80

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            +LQK GHK + L+GGGT+ IGDPS +D++R M+   EI  N      I ++  K+    
Sbjct: 81  RYLQKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAG---ILATINKFLNQG 137

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ
Sbjct: 138 DGVVIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQ 197

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT
Sbjct: 198 SYDFVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTQLLLTSTGEKMGKT 257

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK
Sbjct: 258 ADGAVWLDAEMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKK 317

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG
Sbjct: 318 VLATEATAICHGKSAALAAENAALQVFEHNDD-AGLPHFPLHKSLIAQGISVAKLLQLAG 376

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFGKKNHIICHLC 417
              S +  RR +K    KIN  ++ +    +   DF    G I +  GKK      + 
Sbjct: 377 LEESISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKR--RIKVV 432


>gi|227545498|ref|ZP_03975547.1| tyrosine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908935|ref|ZP_07126398.1| tyrosine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227184519|gb|EEI64590.1| tyrosine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894342|gb|EFK87700.1| tyrosine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 420

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 152/420 (36%), Positives = 226/420 (53%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 6   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +            G  +  ++
Sbjct: 66  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K++ LT PL+  A GTK GKT  GA
Sbjct: 180 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGSDTKVYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 240 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVS-RGMGLLTLI 356
           A E+T  VHG+E  E+A   +   F   +    +  I      +   +V  +   ++  +
Sbjct: 300 AQEVTKFVHGQEAVEEAERISKALFSGDVTDLSVAEIEQGFKNMPSVDVENKKENIVLWL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G  +S  +AR+ + S AI+IN   + +   +I  Q       + +  GKK++ +  +
Sbjct: 360 TDNGIESSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFDGKFVIVRKGKKHYYLARV 419


>gi|189426548|ref|YP_001953725.1| tyrosyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189422807|gb|ACD97205.1| tyrosyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 401

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 23/409 (5%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
            +RG +  +      D L +   +    G+D TA  LH GH   +  L   Q+ GH    
Sbjct: 12  IKRGCVELLIQKELEDKLATGRPLIIKAGFDPTAPDLHLGHTVLIQKLRQFQQLGHDVHF 71

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T +IGDP+ + E+R+++  +++  N E  K      +          ++ N +WL
Sbjct: 72  LIGDFTGMIGDPTGKSETRKVLTREDVLRNAETYKEQVFKILDP----EKTKVVFNSSWL 127

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            +      +  + S ++V RML  +    R   +Q ++  EF Y ++Q YD V +     
Sbjct: 128 -NELGCGGMIGLASKYTVARMLERDDFHKRYSTQQPIAIHEFLYPLIQGYDSVAMK---- 182

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G +L           LT PLL       KM K+L   I +++  
Sbjct: 183 ADVELGGTDQKFNLLMGRELQREWGQTPQCVLTMPLLEGLDGVNKMSKSLGNYIGISEA- 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITT 308
             P   +    +I D  ++ + + L+   ++EI+++             AKK +  EI T
Sbjct: 242 --PDEIFGKVMSISDELMLRYYELLSDKSLAEIEQLKSGLADGSLHPMAAKKALGREIVT 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG    + A    ++ F  +     MP +S    +    + L   + +AG   S  EA
Sbjct: 300 RFHGAGAGDTAEENFVKRFKENEIPDEMPQVSYGTADC--PLLLAKALTEAGLTKSNGEA 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR +    +K+N   +SN  L++        G   +  GK+  +   + 
Sbjct: 358 RRSIDQGGVKLNGEKVSNTNLELTAA-----GEYIVQIGKRRFVRIVIA 401


>gi|74316477|ref|YP_314217.1| tyrosyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|115305829|sp|Q3SLJ8|SYY_THIDA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|74055972|gb|AAZ96412.1| tyrosyl-tRNA synthetase, class Ib [Thiobacillus denitrificans ATCC
           25259]
          Length = 396

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 92/416 (22%), Positives = 173/416 (41%), Gaps = 23/416 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               L  +  RG    +     ++ L +   +    G+D TA  LH GH   L  L   Q
Sbjct: 1   MEHALQEIK-RGADELLVEAELVEKLKTGRPLRIKAGFDPTAPDLHLGHTVLLNKLRQFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ + L+G  T +IGDP+ ++ +R  +  + + EN +  +      +          
Sbjct: 60  VLGHRIVFLIGDFTGMIGDPTGKNATRPPLTREAVAENAKTYQEQVFKVLDPAL----TE 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W+  +  + ++R   +  +V RML  +  + R   ++ ++  EF Y ++Q YD 
Sbjct: 116 VRFNSEWMEGLGSVGMIRLAATH-TVARMLERDDFQKRYSSQKPIAIHEFLYPLIQGYDS 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSG 243
           VEL       +++GG+DQ  N++ G +L +    P    LT PLL  T    KM K+L  
Sbjct: 175 VELK----ADVELGGTDQKFNLLMGRELQKHYGQPPQCILTMPLLEGTDGVNKMSKSLGN 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
            I +N+    P   +    +I DA +  +   L+   ++ I+             E K  
Sbjct: 231 YIGINEA---PGQIFGKLMSISDALMWRYIDLLSFESIARIEGWRSDVAAGLNPREVKVA 287

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
            A EI    HG + A  A       F   +    MP + +    +  G+ +  L+ +AG 
Sbjct: 288 FAQEIVGRFHGDKAARDAVAEFEARFQRGVLPDDMPEVDLHG--IDGGLPVPQLLKQAGL 345

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +ST++A R +    ++++   ++++   +          +    GK+      + 
Sbjct: 346 VSSTSDAIRQIAGGGVRLDGERVTDKGQSVPA-----GATVVAQVGKRKFARVTVI 396


>gi|218282313|ref|ZP_03488603.1| hypothetical protein EUBIFOR_01185 [Eubacterium biforme DSM 3989]
 gi|218216686|gb|EEC90224.1| hypothetical protein EUBIFOR_01185 [Eubacterium biforme DSM 3989]
          Length = 430

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 141/421 (33%), Positives = 222/421 (52%), Gaps = 20/421 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +    L  RG +  +++   ++ + + G VT YIG D TA SLH GH + L++   L+
Sbjct: 20  KMELFEELKWRGLVDNVTSEE-VEDVINNGEVTFYIGTDPTADSLHIGHYSSLLMAKRLE 78

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH PI L+GG T  IGDP      R M+ S+ ++ N + +    S    +        
Sbjct: 79  KHGHHPIMLVGGATGFIGDPKA-TGERSMLTSEVLKSNYDALHAQISKLWGFDM------ 131

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  W   I  ID LR+ G  F+VN ML+ E+V+ RL  +  +S+ EF+YMILQ+ DF
Sbjct: 132 -VNNLDWTKDITIIDFLRDYGKLFNVNYMLNKETVKKRL--DSGISYTEFSYMILQSLDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLS 242
           + L +   C +Q+GG DQWGNI  G++L  +     +  + LT PL+T A GTK GK+ +
Sbjct: 189 LNLYQTRGCTMQIGGQDQWGNITSGLELIRKKCGADVKCYGLTMPLITKADGTKFGKSET 248

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G +WL+ + TSPY  +Q+  N DD+ V+ + K+LT L   EID   ++  +     EA+K
Sbjct: 249 GTVWLDPKKTSPYELYQFLFNTDDSKVIEYLKKLTFLTKEEIDALEVSLKEDAGRREAQK 308

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-----ISISKDEVSRGMGLLTL 355
            +A E+   +HG E  E A       F   ++            ++ K +   G  L+ +
Sbjct: 309 KLAEEVVRDLHGEEGLESALKITNALFRGQLNDLDEQQRLDAVKNMDKVDQEAGKSLIDV 368

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+A  A+S  EAR  +K N+I +N   +++E L I       +  + +  GKK +   +
Sbjct: 369 LVEAKIASSRREAREWIKGNSISLNGVKVNDETLVIDSTQAYVSNYVIIRRGKKRYYCLN 428

Query: 416 L 416
           L
Sbjct: 429 L 429


>gi|259501971|ref|ZP_05744873.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170030|gb|EEW54525.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 416

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 217/420 (51%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIIDDLQWRGAINQTTDLDALKELTENKKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R +    ++  N   +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERTLQTMDQVHHNEAALTAQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSQISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGSETKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DVV + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTLI 356
           A E+T  VHG +  E+A   +   F   +    +  I      +   +V      ++  +
Sbjct: 296 AEEVTKFVHGEQAVEEAQRISKALFSGDVADLSVAEIEQGFKNMPSVDVDNQKENIVVWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S  +AR+ + + AI+IN   +++   ++          + +  GKK++ +  +
Sbjct: 356 TDNGMEPSRRQARQDVSNGAIRINGEKVTDVDAEVDPSTHFDGKFVIVRRGKKHYFLARV 415


>gi|148979044|ref|ZP_01815289.1| tyrosyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962017|gb|EDK27305.1| tyrosyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 395

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEDELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDPS ++ +R  +  +++ +N E  K      +      
Sbjct: 59  RAFQELGHEVTFLIGDFTAMVGDPSGKNSTRPPLSREDVLKNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTQIRFNSEWLSDLGA-EGMIRLASNQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GHDSVAL----ESDVELGGTDQKFNLLMGRELQKAAGQKPQAVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+  +       K   +
Sbjct: 230 SAHNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAELKAGVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K I+A EI    H   +A+ A    +  F  +     MP       E   G+ +  ++ 
Sbjct: 287 VKVILAKEIIARFHSEADADAAEQEFVNRFAKNQVPDDMPEF-----EFEAGLPIANVLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A KI    + + KL  +       G      GK+      +
Sbjct: 342 EAGLVNSTSDAMRMIKQGAAKIEGEKVEDNKLVPEA------GTAVYQVGKRKFARITI 394


>gi|332991825|gb|AEF01880.1| tyrosyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 399

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 175/412 (42%), Gaps = 23/412 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     ++ L S   +T   G+D TA  LH GH   +  L   Q+ GH
Sbjct: 8   LAEIK-RGTDEILPEEDLIEKLKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQQLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + L+G  T +IGDP+ ++ +R+ +  +++ EN +  +      +          +  N
Sbjct: 67  TVVFLIGDFTGLIGDPTGKNVTRKPLNKEQVLENAQTYQEQVFKILDPEL----TQIRFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+  +    +++   S  +V RML  +  + R    Q ++  EF Y ++Q +D V L 
Sbjct: 123 SEWMDQLGAAGMIKLAAS-QTVARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDSVALK 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G +L +         +  PLL       KM K+L+  I +
Sbjct: 182 ----SDVELGGTDQRFNLLMGRELQKEQGIKPQSIVMVPLLEGLDGVQKMSKSLNNYIGI 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI  + +         + K ++A E
Sbjct: 238 T---DAPNDMFGKVMSISDDLMWRYYDLLSFRPLEEIAELKQRVENGENPRDIKILLAKE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H    AE A    ++ F  +     MP   I+  +   G+ +  L+ +     ST
Sbjct: 295 IIARFHDDAAAEGAHQDFIQRFQKNAIPDEMPEFEIALGD--DGIAIGNLLKETKLVGST 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++A R +K  A+KIN   + + +L +        G      GK+      L 
Sbjct: 353 SDAMRMIKQGAVKINGDKVEDTRLVLTEA-----GENVYQVGKRKFARITLA 399


>gi|226226049|ref|YP_002760155.1| tyrosyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089240|dbj|BAH37685.1| tyrosyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 428

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 140/433 (32%), Positives = 213/433 (49%), Gaps = 23/433 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A +   L  L+ R  I Q +    L    + G V+ Y G+D TASSLH G+L  +M L
Sbjct: 1   MSA-RPSLLDELAWRELISQHT--EGLPAALAAGTVSGYCGFDPTASSLHVGNLIPIMGL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P +L+GG T +IGDPS R   R +     I  N E I+G  S F+ +  G 
Sbjct: 58  MHLQRAGHRPYALVGGATGMIGDPSGRASERVLQGLDAIHSNAEAIRGQLSRFLDFD-GP 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A ++NN  WL  +  +D LRE G  FSVN ML+ +SV+SR+  +  +S+ EF+YM+LQ
Sbjct: 117 RGAKLVNNVDWLSKLSVLDFLRETGKHFSVNYMLAKDSVKSRI--DGGISYTEFSYMLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A+DF EL ++    LQ GGSDQWGNI  G++L  R        LT PL+T A G+K GK+
Sbjct: 175 AHDFWELNRSEGVTLQFGGSDQWGNITAGLELIRRSGGADSNGLTFPLITNADGSKFGKS 234

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
              G++WL+ E TSPY F+Q+W   DD D   + +  T   + E+           E   
Sbjct: 235 TGGGSVWLDPERTSPYQFYQFWMGADDRDASRYLRYYTLFSLDEVTALDAEVRTAPEKRA 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM-----------SIHSQHMPTISIS---K 343
           A++ +A E+T+ VH  E A  A   +   F+                  +P        +
Sbjct: 295 AQRALAVEVTSRVHSAEAARVAQEVSALLFEKADPQALSGEALKALRAEIPFAEYEPPAE 354

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
              + G+ +   +   G A S   A+R L+   + +N   +      +         ++ 
Sbjct: 355 GAPAEGIDVYQCLTLLGIAASRGAAKRLLEQGGVSVNGVKLGAADRVVGEDRLLRDRHLL 414

Query: 404 LSFGKKNHIICHL 416
           +  G++   +  +
Sbjct: 415 VRKGQREFGLIQV 427


>gi|9971901|gb|AAG10463.1|AF279106_25 predicted tyrosyl-tRNA synthetase [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 395

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 106/414 (25%), Positives = 179/414 (43%), Gaps = 23/414 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            SD L  L +RG    ++       L S   +    G+D TA  LH GH   L  L   Q
Sbjct: 1   MSDALK-LIKRGTDEILTESDLKKKLDSGKQLIIKAGFDPTAPDLHLGHTVLLNKLRHFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHK I L+G  T  IGDPS ++++R  + S+E+  N +  +      +K    K    
Sbjct: 60  DLGHKVIFLIGDFTGQIGDPSGKNKTRPTLTSEELISNAKTYEKQVFKILK----KELTE 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +   D L  + S ++V RML  +    R    QS++  EF Y ++Q YD 
Sbjct: 116 VKFNSEWCNKLGA-DGLIGLASKYNVARMLERDDFNKRYSANQSIAIHEFLYPLVQGYDS 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSG 243
           V L    +  ++ GG+DQ  N++ G +L           LT P+L    G  KM K+L+ 
Sbjct: 175 VAL----EADVECGGTDQKFNLLVGRELQRSYGQEPQVVLTVPILEGLDGINKMSKSLNN 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            I +++    P + +    +I D  +  + + L+     EI   +    +G    + K +
Sbjct: 231 FIAIDE---EPNDMFGKIMSISDELMWRWFELLSFTSEKEIGVLKKKMEEGTNPRDIKFL 287

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E+    H   +  K   A ++ F        +P++S+     + G+ L+ L+     
Sbjct: 288 LAEELVDRFHSEGDGSKCKEAFLQRFQKGQMPDDIPSMSVDVG--AEGIPLVNLLKNCEM 345

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +ST+EA R +K   +KI++  I + K+ I               GK+  +   
Sbjct: 346 TSSTSEAMRLVKQGGVKIDSVKIEDPKMLIS-----KGQESIYQVGKRKFLKIK 394


>gi|254490120|ref|ZP_05103312.1| tyrosyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464708|gb|EEF80965.1| tyrosyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 399

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 176/406 (43%), Gaps = 22/406 (5%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             RG    +     ++ L S   +    G+D TA  LH GH   L  L   Q  GH  + 
Sbjct: 11  IRRGAEEILVESELVEKLESGRPLRIKAGFDPTAPDLHLGHTVLLNKLKQFQDLGHHILF 70

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T +IGDP+ ++ +R+ +   ++++N    +      +     +    ++ N  W+
Sbjct: 71  LIGDFTGMIGDPTGKNVTRKPLTPDQVKQNAVTYQEQVFKILD----REKTEVVFNSHWM 126

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D++  + S  +V RML  +    R    Q ++  EF Y ++Q YD VEL    +
Sbjct: 127 NDMSSADMI-RLASNHTVARMLERDDFHKRYTSNQPIAIHEFLYPLIQGYDSVEL----N 181

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G +L +         LT P+L       KM K+L+  I +N   
Sbjct: 182 ADVELGGTDQKFNLLMGRELQKAYGKAPQCILTMPILEGLDGVQKMSKSLNNYIGIN--- 238

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTM 309
            SP + +    +I D  +  + + L+   + EI++  +   +  N  E KK  A EI   
Sbjct: 239 DSPKDIFGKLMSISDDLMWRYIELLSFRNIKEIEQWRQDVEQGRNPIEIKKDFAEEIVAR 298

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  +    A       F        +P ++++      GM +  ++ +AG ++ST++A 
Sbjct: 299 FHDEQAGTDARQGFENQFKKGELPDDIPEVTLTVGV--EGMAIANVLKEAGLSSSTSDAM 356

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +K  A KI+   I+++ L I               GK+      
Sbjct: 357 RMIKQGAAKIDGEKITDKSLLIAA-----GVEGIFQVGKRKFAKIT 397


>gi|323492029|ref|ZP_08097194.1| tyrosyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313758|gb|EGA66857.1| tyrosyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 395

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 92/419 (21%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQELGHDVTFLIGDFTAMVGDPTGKNSTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I +++    P   +    +I D  + ++   L+  P+ E+ ++       +   +
Sbjct: 230 SANNYIGISEA---PSEMFGKIMSISDDLMWNYYDLLSFRPLDEVAQLKADVAAGQNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H + +A+ A    +  F  +     MP       E   G+ +  L+ 
Sbjct: 287 VKVALAKEIIARFHSQADADAAEQEFVNRFAKNQIPDEMPEF-----EFEAGLPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R +K  A KI+   +++ K   +       G      GK+      +
Sbjct: 342 EAALCASTSEAMRMVKQGAAKIDGEKVADSKFAPQA------GTYVFQVGKRKFARITI 394


>gi|255003560|ref|ZP_05278524.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Puerto
           Rico]
 gi|255004687|ref|ZP_05279488.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Virginia]
          Length = 414

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 183/415 (44%), Positives = 264/415 (63%), Gaps = 5/415 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++ +
Sbjct: 2   EFKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVMRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHK + L+GGGT+ IGDPS +D++R M+   EI  N      I ++  K+      
Sbjct: 62  LQKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAG---ILATINKFLNQGDG 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ+Y
Sbjct: 119 VVIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  
Sbjct: 179 DFVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTQLLLTSTGEKMGKTAD 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++
Sbjct: 239 GAVWLDAEMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG  
Sbjct: 299 ATEATAICHGKSAALAAENAALQVFEHNDD-AGLPHFPLHKSLIAQGISVAKLLQLAGLE 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFGKKNHIICHL 416
            S +  RR +K    KIN  ++ +    +   DF    G I +  GKK  I   +
Sbjct: 358 ESISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKRRIKVVV 412


>gi|256372390|ref|YP_003110214.1| tyrosyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008974|gb|ACU54541.1| tyrosyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 411

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 146/409 (35%), Positives = 214/409 (52%), Gaps = 8/409 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  RG +   S P  L+ L   G    YIG+D TA SLH G+L  ++L   L   GH+
Sbjct: 5   EELRWRGAVQDASAP--LEQLLDAGPRVFYIGFDPTADSLHVGNLLGIVLARRLIDAGHR 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I + GG T +IGDPS R   R ++    ++ N  +I G     +          + +N 
Sbjct: 63  AILVAGGATGMIGDPSGRSSERVLLDPATLRHNTARIAGQLQRLLG-DVVPGAVTLEDNR 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           TWL  +  I  LR+IG    V+ ML+ ES+R+RL  E  LSF EF+YMILQA DFVEL +
Sbjct: 122 TWLEPLTLIGFLRDIGKHVPVSAMLARESIRTRLGGE-GLSFTEFSYMILQAVDFVELHR 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C LQ+GGSDQWGNI  GIDL  RL   ++  LT PL+T A GTK GK++ G +WL++
Sbjct: 181 RYGCTLQLGGSDQWGNIAAGIDLVRRLDGHEVHGLTWPLVTKADGTKFGKSMGGNVWLDE 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           + TSPY  +Q++   +D  V+ +    T L   EI   R A         A + +A E+ 
Sbjct: 241 DRTSPYELYQFFVRAEDQKVMEYVALYTFLSFDEIAALRTAHEDDPSRRIAHRRLAWEVV 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
             VHG   A++AA AA   F+        P +++ +     G+ ++ L + AG A S +E
Sbjct: 301 RFVHGEAAADQAAEAARALFEGGRAEAGAPVVTLERAAFGDGIDVIDLALAAGLARSRSE 360

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR +    + ++      E  ++   D     ++ L  GK++ ++  L
Sbjct: 361 ARRLIAQGGLYVDGRRAL-EGQRVSQADLTDG-HLTLRRGKRDWVVVRL 407


>gi|161833674|ref|YP_001597870.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
 gi|152206164|gb|ABS30474.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
          Length = 433

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 147/433 (33%), Positives = 227/433 (52%), Gaps = 24/433 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  + +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L
Sbjct: 1   MNNFNLNLIQELLWRGLIHDTTYSEQIK----NEIITLYTGFDPTYKSLHIGNLVAIIML 56

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK+G+  IS++GGGT +IGDPS ++  R + + + +  NI  +K   S +I +   K
Sbjct: 57  IHFQKSGNNIISVIGGGTGMIGDPSGKNCERILKKKELLYNNIFYLKKQLSLYIDFNYPK 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +   LNN  WL    +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQ
Sbjct: 117 NEI--LNNYEWLKKKLFIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+ L K  +C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT
Sbjct: 175 AYDFIYLYKEKNCSLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKT 234

Query: 241 LS-GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
            +   IW++  +TSPY F+Q+W NI D     + K  T L   EI  +      +     
Sbjct: 235 ENGENIWIDPNLTSPYEFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKL 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDE 345
            +K +A+EIT  +HG++  EK    +   F+                 +++P   I    
Sbjct: 295 IQKKLASEITIFIHGKKTFEKIKFISNILFNKKKIINEINKNYIIFIYKNIPHKKIYIYH 354

Query: 346 VSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            +  + ++ L+V K+ F  S  EA R LK N+I IN   I +EK  +   D  S   + L
Sbjct: 355 -NFNIPIIDLLVNKSKFLKSKKEAIRQLKLNSIYINKKNI-DEKFILNKNDLISGTYVLL 412

Query: 405 SFGKKNHIICHLC 417
             GKKN  +  + 
Sbjct: 413 QKGKKNFFMIKIV 425


>gi|83590545|ref|YP_430554.1| tyrosyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|115305809|sp|Q2RHS8|SYY_MOOTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83573459|gb|ABC20011.1| tyrosyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 413

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 188/416 (45%), Gaps = 32/416 (7%)

Query: 9   LSILSERGFIHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L IL  RG + +I    +L       L +   +   +G D TA  +H GH   L  L   
Sbjct: 19  LRILR-RG-VAEIVPEEDLQAKLRKSLATGKPLKVKLGLDPTAPDIHLGHTVVLQKLRQF 76

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I ++G  T  IGDP+ + E+RR +   EI  N E  K      +         
Sbjct: 77  QELGHQVIIIIGDFTGRIGDPTGKSETRRQLTEAEILANAETYKEQIFKVLDP----EQT 132

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  WL  + + +++  + +  +V RML  +    R +  + +S  EF Y ++Q YD
Sbjct: 133 RVTFNSHWLGKLTFAEVIE-LAARTTVARMLERDDFARRFQENRPISIHEFFYPLMQGYD 191

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
            V LA      +++GG+DQ  N++ G  L          A+  P+L       KM K+L 
Sbjct: 192 SVALA----ADVELGGTDQKFNLLMGRHLQREYGQEPQVAMMMPILPGLDGVQKMSKSLG 247

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAK 299
             I + +   SP   +    ++ D  ++++ + +T +P+ E   I +          +AK
Sbjct: 248 NYIGIKE---SPREMYGKTMSLPDELMLTYYELVTAVPLEELAAIRQGLASGSLHPRDAK 304

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI  M H  E A +A     + F        MP ++I +D V     L  L+V+A
Sbjct: 305 MRLAREIVAMYHTPEAALEAEREFRQVFQQHDLPDDMPELTIKEDRV----WLPRLMVQA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A ST+EARR ++  A+KI+   +++   ++++++        L  GK+     H
Sbjct: 361 GLAPSTSEARRLIRQGAVKIDGERVTDPDTEVEVREGQ-----VLQAGKRKFARLH 411


>gi|312869623|ref|ZP_07729773.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094857|gb|EFQ53151.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 416

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 217/420 (51%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIIDDLQWRGAINQTTDLDALKELTENDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R +    ++  N E +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERTLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSRISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  ++     K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDAKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG +  E+A   +   F   +       I        S D   +   ++  +
Sbjct: 296 AEEVTKFVHGEKAVEEAQRISKALFSGDVADLSAAEIEQGFKNMPSVDVDDKKENIVVWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S  +AR+ + + AI+IN   +++ + ++          + +  GKK++ +  +
Sbjct: 356 TDNGMEPSRRQARQDVSNGAIRINGEKVTDVEAEVDPSTHFDGKFVIVRRGKKHYFLARV 415


>gi|301170369|emb|CBW29975.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 395

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RRFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P++EI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|68249800|ref|YP_248912.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|145633010|ref|ZP_01788742.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae 3655]
 gi|229846285|ref|ZP_04466397.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|81335774|sp|Q4QL45|SYY_HAEI8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68057999|gb|AAX88252.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|144986236|gb|EDJ92815.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae 3655]
 gi|229811289|gb|EEP47006.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 395

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTNINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +    +GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|56417206|ref|YP_154280.1| tyrosyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81358833|sp|Q5P9K5|SYY_ANAMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56388438|gb|AAV87025.1| tyrosyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 414

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 182/416 (43%), Positives = 263/416 (63%), Gaps = 7/416 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++ +
Sbjct: 2   EFKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVMRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHK + L+GGGT+ IGDPS +D++R M+   EI  N      I ++  K+      
Sbjct: 62  LQKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAG---ILATINKFLNQGDG 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ+Y
Sbjct: 119 VVIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  
Sbjct: 179 DFVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTHLLLTSTGEKMGKTAD 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++
Sbjct: 239 GAVWLDAEMFDPGNYWQYFRNVADVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG  
Sbjct: 299 ATEATAICHGKSAALAAENAALQVFEHNDD-AGLPHFPLHKSLIAQGISVAKLLQLAGLE 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFGKKNHIICHLC 417
            S +  RR +K    KIN  ++ +    +   DF    G I +  GKK      + 
Sbjct: 358 ESISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKR--RIKVV 411


>gi|257095538|ref|YP_003169179.1| tyrosyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257048062|gb|ACV37250.1| tyrosyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 399

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 92/420 (21%), Positives = 173/420 (41%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A + D   I  +RG    +     ++ L S   +    G+D TA  LH GH   +  L
Sbjct: 1   MRAVEEDLKQI--KRGSEELLIEAELVEKLKSGRPLRIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH  + L+G  T +IGDP+ ++ +R  +  ++I++N    +      +      
Sbjct: 59  RHFQDLGHHVMFLIGDFTGMIGDPTGKNATRPPLSHEQIRDNATTYREQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W   +    ++R      +V RML  +    R +  Q ++  E  Y + Q
Sbjct: 116 -RTEVCFNASWFEPLGAAGMIRLAALH-TVARMLERDDFAKRYRGGQPIAIHELLYPLCQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +       +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAMK----ADVELGGTDQKFNLLVGRELQKHFGQAPQCILTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   + +++    P   +    ++ D  +  + + L+      I   R   + G+   E
Sbjct: 230 SLGNYVGIDEP---PGEMFGKLMSVSDELMWRYFELLSFRSSEAIAGFRQDAVDGRNPRE 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    HG + A +A       F        MP +S    +  + + +  ++ 
Sbjct: 287 IKVLLAQEIVGRFHGAQAALQALADFDARFRRGAIPDDMPELSFPATD--QPLTIAQVLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++G   ST+EA R ++   ++I+ + I +  L    +         L  GK+ +    + 
Sbjct: 345 QSGLTASTSEALRMIEQGGVRIDGTRIDDRNLVFSAK-----ACFVLQVGKRKYARVSIA 399


>gi|148269582|ref|YP_001244042.1| tyrosyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281411699|ref|YP_003345778.1| tyrosyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|147735126|gb|ABQ46466.1| tyrosyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281372802|gb|ADA66364.1| tyrosyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 401

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 105/410 (25%), Positives = 179/410 (43%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL  R  +  +S    LD +  +G +   +G D +   LH GH   L  L   Q  GH
Sbjct: 7   VKILK-RNVVDFVSEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDPS R+E+R M+  +E+ EN +  +      +          +  N
Sbjct: 66  TVVLIIGDFTARIGDPSGRNETRPMLTREEVLENAKTYQEQAFKILDP----ERTELRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL        +  + S ++V RML  +    R K    ++  EF Y + QAYD V + 
Sbjct: 122 GEWL-DRMTFADVIVLASKYTVARMLERDDFAKRFKEGIPITISEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G  + E         +T P++  T    KM K+    I  
Sbjct: 181 ----ADVELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIAT 304
           N     P   +    +I D  ++ + + LT +P   + E +R  K +     + K ++A 
Sbjct: 237 N---DPPEEMYGKLMSIPDELIIKYMRLLTDVPEERIEEYERKMKEKTINPRDVKMVLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A+KA    ++ F        MP + IS+++      ++ L+V+ G  +S
Sbjct: 294 EITRFFHGEENAKKAQEQFVKVFQKKEIPDEMPIVEISQEK-----NIVDLLVEIGAVSS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EA+R +    + I+   I + K  +K       G   L  GK+     
Sbjct: 349 KSEAKRLVAQGGVYIDGERIEDIKFTVKPV-----GEQVLKVGKRKFYRI 393


>gi|148828405|ref|YP_001293158.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|148719647|gb|ABR00775.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 395

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTI 394


>gi|301156148|emb|CBW15619.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 395

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 105/420 (25%), Positives = 174/420 (41%), Gaps = 28/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKIKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P + +    +I D  +  +   L+  P++EI         GK   +
Sbjct: 230 SLGNYIGVT---DAPSDMFGKIMSISDELMWDWYNLLSFRPLTEIAELKAEVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    AE A    +  F        MP  +         +GL TL+ 
Sbjct: 287 VKILLAKEIIARFHDEAAAEAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   ST+EA R  K   +KIN   + + K           G      GK+      + 
Sbjct: 342 EAGLVPSTSEAIRSAKQGGVKINGEKVEDMKAN------APKGTNVYQVGKRKFARVTIA 395


>gi|227529733|ref|ZP_03959782.1| tyrosine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350334|gb|EEJ40625.1| tyrosine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 417

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 145/424 (34%), Positives = 218/424 (51%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAINQTTDKEALKELTENKNIGLYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R +    +++ N + +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKTERTLQTESQLEHNKKALTEQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TWL +   ID LR+ G  F+VN ML+ E V SRL  +  +SF EF Y ILQA DF+ 
Sbjct: 118 DNYTWLKNFTMIDFLRDFGKLFNVNTMLNKEVVASRL--DSGISFTEFTYQILQAVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +N   +L++GGSDQWGNI  GIDL  ++     K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYQNNSVQLEIGGSDQWGNITAGIDLIHKVEGPDAKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ + TSPY F+Q+W N DD DVV + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPKKTSPYEFYQFWINQDDRDVVKYLKYFTFLSKDEIDELAEKVQKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F                + +P++ ++ ++ +  + L
Sbjct: 296 AEEVTKFVHGEEGLAEAQRITKALFSGDVADLTTEEIEQAFKDVPSVEVANEKKNIILWL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +          S  +AR+ +++ AI IN   +++   +I          + +  GKK + 
Sbjct: 356 VD---DTKIEPSRRQARQDVENGAIHINGEKVTDVDAEIDPSSHFDGKFVIVRRGKKRYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LVRV 416


>gi|229844790|ref|ZP_04464928.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812171|gb|EEP47862.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 395

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+ +  H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELISRFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|313608546|gb|EFR84432.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 387

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 147/387 (37%), Positives = 202/387 (52%), Gaps = 13/387 (3%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
            Y G D +  S+H GHL   M+L   Q  GH+PI L+GG T  IGDPS + E R++   +
Sbjct: 1   LYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSME 60

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +I +N+E ++        +  G + A M+NN  W   +  +D LR+ G  F+VN MLS +
Sbjct: 61  QISKNVESLRVQLGKIFDFE-GDSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKD 119

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            V SRL  E  +SF EF Y ILQA DF  L +  DCRLQ+GGSDQWGNI  G+DL  + +
Sbjct: 120 IVASRL--EVGISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQ 177

Query: 218 TP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               K F LT PLLT A GTK GK+  GAIWLN E T+PY F+Q+W N DD DVV + K 
Sbjct: 178 GENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKY 237

Query: 276 LTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T L  +EID +AK       +  A+K +A E+T  VH  E  E+A   +   F   + +
Sbjct: 238 FTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMTKFVHSEEALEQALKISKALFSGDVKA 297

Query: 334 QHMPTISISKDEV------SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                I     +V           L+  +V  G   S  +AR  + + AI IN     + 
Sbjct: 298 LTADEIEQGFKDVPTFVAEDSEANLVDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDL 357

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +  +   D        +  GKK + + 
Sbjct: 358 EKIMDASDRIENKFTIVRRGKKKYFLV 384


>gi|56475931|ref|YP_157520.1| tyrosyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81358432|sp|Q5P7U2|SYY_AZOSE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56311974|emb|CAI06619.1| t-RNA synthetase, class Ib [Aromatoleum aromaticum EbN1]
          Length = 399

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 180/419 (42%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++     L +RG    +     ++ L S   +    G+D TA  LH GH   L  L
Sbjct: 1   MTDVQAAL--ELIKRGAEELLVEAELVEKLESDRPLRVKAGFDPTAPDLHLGHTVLLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ + L+G  T++IGDPS ++ +R  +  ++I EN    +      +      
Sbjct: 59  RHFQELGHQVMFLVGDFTAMIGDPSGKNATRPPLSREQILENARTYQEQVFKILDPD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+ S+     +  + S ++V RML  +    R    Q+++  EF Y + Q
Sbjct: 116 -KTEICFNSSWMESLGT-AGMIRLASRYTVARMLERDDFAKRYAGGQAIAIHEFLYPLCQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +       +++GG+DQ  N++ G +L +  +      L  PLL       KM K
Sbjct: 174 GYDSVAMR----ADVELGGTDQKFNLLVGRELQKHDRQAPQCVLMMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +L   I + +    P   +    +I D+ +  +   L+  P  EI R       G+   E
Sbjct: 230 SLGNYIGITEA---PREIFGKIMSISDSLMWRYFDLLSFHPAVEIARYRAEVEGGRNPRE 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    AE A       F   +    +P +++   +   G+ +  ++ 
Sbjct: 287 LKVLLAQEIVARFHSHAAAEDALADFEARFQRGVLPDDIPEVNVVVGD--GGLPVFQVVK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+++N   + ++ L ++         + L  GK+      L
Sbjct: 345 QAGLTGSTSEALRMIEQGAVRLNGERVEDKGLVLQR-----DQTVVLQVGKRKFASVVL 398


>gi|145637486|ref|ZP_01793144.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae PittHH]
 gi|145269292|gb|EDK09237.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae PittHH]
          Length = 395

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P++EI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|307257546|ref|ZP_07539309.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863947|gb|EFM95867.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 396

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 177/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILDP----NKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +   + +  + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL       KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|16273500|ref|NP_439752.1| tyrosyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174554|sp|P43836|SYY_HAEIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1574452|gb|AAC23254.1| tyrosyl tRNA synthetase (tyrS) [Haemophilus influenzae Rd KW20]
          Length = 401

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGTXGMI-RLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P++EI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      L
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVRL 394


>gi|46143699|ref|ZP_00134668.2| COG0162: Tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208940|ref|YP_001054165.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126097732|gb|ABN74560.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 396

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 177/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILDP----NKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +   + +  + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL       KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|190150753|ref|YP_001969278.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307264155|ref|ZP_07545749.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|189915884|gb|ACE62136.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870529|gb|EFN02279.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 396

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 177/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILDP----NKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +   + +  + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL       KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQVAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|319897278|ref|YP_004135473.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432782|emb|CBY81147.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 395

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSETDLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTI 394


>gi|303252484|ref|ZP_07338648.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246392|ref|ZP_07528468.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307248519|ref|ZP_07530537.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307250750|ref|ZP_07532683.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307255377|ref|ZP_07537187.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307259827|ref|ZP_07541545.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307261956|ref|ZP_07543614.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|302648685|gb|EFL78877.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306852725|gb|EFM84954.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306854995|gb|EFM87180.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306857218|gb|EFM89341.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306861686|gb|EFM93670.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306866125|gb|EFM97995.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868367|gb|EFN00186.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 396

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 101/411 (24%), Positives = 177/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILDP----NKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +   + +  + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL       KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   I + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKIEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|90413143|ref|ZP_01221139.1| tyrosyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325834|gb|EAS42286.1| tyrosyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 395

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +     I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEQALAEI--KRGIDELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +   + +  + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 116 -KTKIEFNSTWLSELGA-EGMIRLASNQTVARMLERDDFKKRYNGGRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + ++ + L+  P+ EI++  +         +
Sbjct: 230 SAHNYIGVSEV---PTEMFGKIMSISDDLMWNYFECLSFRPLEEIEQFKQDMANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP +     E   G+ +  L+ 
Sbjct: 287 VKILLAKEIIARFHSAADADAAEQEFINRFQKGAMPEEMPEL-----EFEAGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R ++  A KI+ + I + KL          G      GK+      L
Sbjct: 342 DAGLVNSTSDAMRMIRQGAAKIDGNKIEDTKLIPAA------GTAVYQVGKRKFARITL 394


>gi|114048453|ref|YP_739003.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|113889895|gb|ABI43946.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 398

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 95/418 (22%), Positives = 176/418 (42%), Gaps = 25/418 (5%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALK----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++  +         + K
Sbjct: 232 HNYIGVSEPANEMF---GKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGANPRDTK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI    H +  AE A  A ++ F        +P + ++  E   G+ +  L+  A
Sbjct: 289 IALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIANLLKDA 345

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               ST++A R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 346 DLVGSTSDAMRMIKQGAVKMDGEKVDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 398


>gi|153872691|ref|ZP_02001508.1| Tyrosyl-tRNA synthetase, class Ib [Beggiatoa sp. PS]
 gi|152070841|gb|EDN68490.1| Tyrosyl-tRNA synthetase, class Ib [Beggiatoa sp. PS]
          Length = 400

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 100/404 (24%), Positives = 178/404 (44%), Gaps = 23/404 (5%)

Query: 18  IHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           +H+I    EL   L S   +    G+D TA  LH GH   L  L   Q+ GH  + L+G 
Sbjct: 14  VHEILLEEELRTKLASGKPLRIKAGFDPTAPDLHLGHTVLLNKLRQFQQLGHTILFLIGD 73

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
            T +IGDP+ ++ +R+ + S+E+QEN    +      +          +  N  W+  + 
Sbjct: 74  FTGMIGDPTGKNVTRQSLSSEEVQENARTYQEQIYKILDPDI----TQICFNSEWMNKMD 129

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
               L ++ +  +V RML  +    R   EQ ++  EF Y ++Q YD V L       ++
Sbjct: 130 A-SGLIKLAAQHTVARMLERDDFHKRYNGEQPIAIHEFLYPLIQGYDSVALQ----ADVE 184

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPY 255
           +GG+DQ  N++ G +L +         LT P+L       KM K+L   I +++     +
Sbjct: 185 LGGTDQKFNLLVGRELQKHYGQTPQVVLTMPILEGLDGVQKMSKSLGNYIGIDEPADEMF 244

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGR 313
                  ++ D  +  + + L+    +EI+   K   +G    + K   A EI    H +
Sbjct: 245 ---GKLMSVSDILMWRYIELLSFKTPAEIENWKKLVEEGANPRDIKVEFAQEIVARFHSQ 301

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           + A +A    +  F      + MP ++++ +  +  + +  L+ +AG   ST+EA R +K
Sbjct: 302 QAAIQAYEQFVARFKRHEMPEDMPEMTLTIE--TEEIPIANLLKQAGLTPSTSEAIRMIK 359

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            NA+KI+   I++  L+I               GK+      + 
Sbjct: 360 QNAVKIDGEKITDRDLKIPQT-----STHIYQVGKRRFARVTVS 398


>gi|145627738|ref|ZP_01783539.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979513|gb|EDJ89172.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 395

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  + ++   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWNWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|303250978|ref|ZP_07337167.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307253125|ref|ZP_07535006.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650195|gb|EFL80362.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859419|gb|EFM91451.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 396

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 101/411 (24%), Positives = 177/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILDP----NKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +   + +  + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL       KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   I + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKIEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|117921496|ref|YP_870688.1| tyrosyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|117613828|gb|ABK49282.1| tyrosyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 398

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 95/418 (22%), Positives = 176/418 (42%), Gaps = 25/418 (5%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALK----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++  +         + K
Sbjct: 232 HNYIGVSEPTNEMF---GKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGANPRDTK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI    H +  AE A  A ++ F        +P + ++  E   G+ +  L+  A
Sbjct: 289 IALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIANLLKDA 345

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               ST++A R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 346 DLVGSTSDAMRMIKQGAVKMDGEKVDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 398


>gi|288939873|ref|YP_003442113.1| tyrosyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895245|gb|ADC61081.1| tyrosyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 400

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 175/408 (42%), Gaps = 21/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +        L     +    G+D TA  LH GH   +  L   Q+ GH+ +
Sbjct: 10  LIQRGTEEILLQDALRKKLEQGRPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHEIL 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R+ +  ++I+EN +  K      +          +L N  W
Sbjct: 70  FLIGDFTGMIGDPTGKSVTRKPLSREQIEENAQTYKDQVFRILDPD----KTRILFNSHW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +     L ++ +  +V RML  +    R K  Q ++  EF Y ++Q YD V L    
Sbjct: 126 LDDLGT-AGLVQLAARQTVARMLERDDFSKRYKSGQPIAIHEFLYPLIQGYDSVALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         +T P+L       KM K+L   I +   
Sbjct: 182 -ADVELGGTDQKFNLLMGRQLQEAYGQEAQVVITLPILEGLDGVQKMSKSLGNYIGIA-- 238

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   +SEI+    A  +G    + K  +  E+ T
Sbjct: 239 -DAPEEMFGKLMSISDDLMWRYFELLSFRELSEIEDWRRAVSEGANPRDIKFELGLELVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E+A KA  A +  F       +MP + ++  +   G+ L  L+ +AG   ST+EA
Sbjct: 298 RFHGAEQARKAQEAFVARFQKGAMPDNMPFVELACSD-DAGLPLANLLKEAGLVASTSEA 356

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R ++  A++I+   + + +    +             GK       L
Sbjct: 357 IRMVRQGAVRIDGERVEDVQQVCAV-----GAEHIYQVGKHRFAKVRL 399


>gi|145639920|ref|ZP_01795520.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145641762|ref|ZP_01797338.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145271011|gb|EDK10928.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145273576|gb|EDK13446.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
 gi|309751098|gb|ADO81082.1| Tyrosyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 395

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|170288258|ref|YP_001738496.1| tyrosyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170175761|gb|ACB08813.1| tyrosyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 401

 Score =  319 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 106/410 (25%), Positives = 178/410 (43%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL  R  +  IS    LD +  +G +   +G D +   LH GH   L  L   Q  GH
Sbjct: 7   VKILK-RNVVDLISEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDPS R+E+R M+  +E+ EN +  +      +          +  N
Sbjct: 66  TVVLIIGDFTARIGDPSGRNETRPMLTKEEVLENAKTYQEQAFKILDP----ERTELRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL        +  + S ++V RML  +    R K    ++  EF Y + QAYD V + 
Sbjct: 122 GEWL-DRMTFADVIVLASKYTVARMLERDDFAKRFKEGIPIAVSEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G  + E         +T P++  T    KM K+    I  
Sbjct: 181 ----ADVELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKKIIAT 304
           N     P   +    +I D  ++ +   LT +P     E ++  K +     + K ++A 
Sbjct: 237 N---DPPEEMYGKLMSIPDELIIKYMHLLTNIPEEVIEEYEKKMKEKTINPRDVKMVLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A+KA    ++ F        MP + IS+D+      ++ L+V+ G A+S
Sbjct: 294 EITRFFHGEENAKKAQEQFVKVFQKKEIPDEMPVVEISQDK-----NIVDLLVEIGAASS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EA+R +    + I+   I + K  ++       G   L  GK+     
Sbjct: 349 KSEAKRLVSQGGVYIDGERIEDIKFTVEP-----DGERVLRVGKRKFYRI 393


>gi|165976904|ref|YP_001652497.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165877005|gb|ABY70053.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 396

 Score =  319 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 177/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILDP----NKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +   + +  + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL       KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGKIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|260580386|ref|ZP_05848215.1| tyrosyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260093063|gb|EEW76997.1| tyrosyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 395

 Score =  319 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P++EI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|206890846|ref|YP_002248124.1| tyrosyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742784|gb|ACI21841.1| tyrosyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 404

 Score =  319 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 192/414 (46%), Gaps = 28/414 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  I        L      +  +   +G+D TA  +H GH   L  +   Q+ 
Sbjct: 9   EIIKRGTVEIILEEDLKKKLEKAYKDKKPLRIKVGFDPTAPDIHLGHTVLLEKMRQFQEL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T +IGDPS + E+R+ +  +E+ +N E  K      +          + 
Sbjct: 69  GHEVIFLIGDFTGMIGDPSGKTETRKPLTREEVLKNAETYKEQVFKIL----HPEKTDIR 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W  S+  +D+ R  G+  +V RML  E  + R    + ++ LEF Y +LQAYD V 
Sbjct: 125 FNSEWFASMTALDMCRLAGA-ETVARMLEREDFKKRFTEGRPITILEFLYPLLQAYDSVY 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G  L +     +   +T PLL       KM K+L   I
Sbjct: 184 LK----ADIELGGTDQKFNLLMGRQLMKMYGMEEQVIITMPLLEGLDGVQKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKLQGKEINEAKKII 302
            +N+    P   +    +I+D  ++ + + L+ + + E++      K       +AK+ +
Sbjct: 240 GINEP---PDEMFGKLMSINDELMLKYYELLSHISIEELNELKTGIKEGRINPRDAKESL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI    HGRE AEKA    +  F      + + T+ I ++   +G+ L  ++ ++G  
Sbjct: 297 AFEIVNRYHGREYAEKARENFIRLFRKREIPEEIETVEIKEE--KQGVWLPKILKESGII 354

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ST+EA R +K   I++N+  I+N  +++        G   +  GK+  I   +
Sbjct: 355 KSTSEAVRLIKQGGIRVNDEQITNPDIKLTA------GEYIVRIGKRRFIKIKV 402


>gi|147677355|ref|YP_001211570.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273452|dbj|BAF59201.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 407

 Score =  319 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 26/413 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  I      D L     +   +T  +G D TA  +H GH   L  L   Q  
Sbjct: 9   EIIKRGTVEIIPESELADKLRRSVETGRPLTVKLGLDPTAPDIHLGHTVVLQKLKQFQDL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ + ++G  T+ IGDP+ + E+RR +  +++  N    +      +          ++
Sbjct: 69  GHQVVLILGDFTARIGDPTGKTETRRQLTEEQVLANARTYERQIFKILDRD----KTKVV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + +  ++  + S ++V RML  +    R K    +S  EF Y ++Q YD V 
Sbjct: 125 FNSQWLAPLTFAQVIE-LASKYTVARMLERDDFARRFKECLPISIHEFFYPLMQGYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +        A+  P+L       KM K+L   I
Sbjct: 184 LK----ADLEIGGTDQKFNLLMGRTLQKEYGQEPQVAVMMPILEGLDGVNKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKII 302
            +N+    P   +    ++ D  ++ + + +T + + E+  +    K       +AK  +
Sbjct: 240 GINEP---PREMYGKTMSLPDELMIRYFELVTAISLEELKTIEAGLKSGEMHPRDAKMRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGF 361
           A EI T  HG E A  A       F        +P   ++   +  G + L  L+  AG 
Sbjct: 297 AREIVTQYHGPEAARAAEEEFKRVFQQKDLPDELPGFKVTAGMLEDGAIWLPRLMAMAGL 356

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A ST+EARR ++   +KI+   + +    +K        ++ +  GK+     
Sbjct: 357 AGSTSEARRLIQQGGVKIDGRKVEDPNYSLKA-----GSDMVIQVGKRRFARI 404


>gi|33151869|ref|NP_873222.1| tyrosyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81423698|sp|Q7VN81|SYY_HAEDU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33148090|gb|AAP95611.1| tyrosyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 396

 Score =  319 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG  +  S    +  L     +   +G D TA  +H GH   +  L
Sbjct: 1   MAQSIEAILAELK-RGVENIYSEEDLIAKLKENRPLRIKLGADPTAPDIHLGHTVVINKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 60  RQFQQLGHEVIFLIGDFTGMVGDPSGKNTTRPPLTREDVLRNAETYKQQLFKILDP---- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 NKTRVVFNSAWLNELGT-EGMIRLTSNYTVARMLERDDFKKRFTNNQPIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L +  +     A+T PLL       KM K
Sbjct: 175 GYDSVALQ----ADVELGGTDQTFNLLVGRELQKSAEQKPQVAITLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I + +    P   +    +I D  +  +   L+  P++EI ++       K   +
Sbjct: 231 SLGNYIGVTEA---PNEMFGKVMSISDELMWDWYNLLSFRPLAEITQLKADVDAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI T  H   EA+ A    +  F        MP    + +     +GL TL+ 
Sbjct: 288 VKILLAKEIITRFHSEAEADLAEQHFINRFQKGAIPDEMPEFCFNGE-----IGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   I + +   +L      G      GK+      +
Sbjct: 343 EAGLVASTSEAIRSAQQGGVKIDGQKIDDVRANAQL------GTFVYQVGKRKFARVTV 395


>gi|307825818|ref|ZP_07656034.1| tyrosyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733126|gb|EFO03987.1| tyrosyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 398

 Score =  319 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 100/416 (24%), Positives = 175/416 (42%), Gaps = 23/416 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + D L+ L  RG    +     +  L     +    G+D TA  LH GH   +  L   
Sbjct: 1   MQEDVLAHLL-RGTDEVLIKQELIKKLEEGRPLRIKAGFDPTAPDLHLGHTVLINKLKQF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ + L+G  T +IGDP+ ++ +R+ +   E+ +N    +      +         
Sbjct: 60  QELGHEVLFLIGDFTGMIGDPTGKNVTRKPLTRDEVIDNARTYEEQIFKILDPA----KT 115

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N +W+ +      L ++ +  +V RML  +    R K  Q ++  EF Y ++Q YD
Sbjct: 116 LVMFNSSWM-NAMSPADLIQLAAKHTVARMLERDDFSKRFKGGQPIAIHEFLYPLIQGYD 174

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
            V +       +++GG+DQ  N++ G  L E         +T P+L       KM K+L+
Sbjct: 175 SVAMK----ADVELGGTDQKFNLLVGRQLQEAFGQKPQVVMTMPILEGLDGVQKMSKSLN 230

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
             + +     S  + +    +I D  +  + + L+  PM+EI        QG    + K 
Sbjct: 231 NYVGIA---DSADDMFGKLMSISDELMWRYFELLSFRPMTEIGLWAEECKQGANPRDYKV 287

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H    A KA       F        M  + +  +  S G  +  ++   G
Sbjct: 288 KLAQEIIERFHDAAAAVKALENFEARFQRGAMPDEMDELELKIEGTSYG--IANILKDTG 345

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              ST+EA R +K  A+KI+   +S++KL+I         N     GK+      +
Sbjct: 346 LTESTSEANRMIKQGAVKIDGEKVSDQKLEISA-----GTNHVYQVGKRKFARVKI 396


>gi|256545791|ref|ZP_05473147.1| tyrosine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398487|gb|EEU12108.1| tyrosine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 437

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 157/397 (39%), Positives = 241/397 (60%), Gaps = 9/397 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 27  NVFDELKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNY 86

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT----D 122
           GH+PI+L+GGGT++IGDPS R + R +M  ++I  N       F  F+++          
Sbjct: 87  GHRPIALLGGGTTMIGDPSGRSDMRMVMTKEKINHNANCFYKQFQRFLEFENEGEDSGDK 146

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++ NN  WL ++ +ID LR++GS F VN ML  ++ ++R+  ++ L+F EF+YM+LQ+Y
Sbjct: 147 AIIENNANWLLNLPFIDFLRDVGSNFLVNEMLKKDAYKNRM--DKGLTFFEFSYMLLQSY 204

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  
Sbjct: 205 DFLELYRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDAKVYGMTFKLLTTADGVKMGKSQK 264

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKI 301
           GA+WL++E TS Y  +QY RN+DD DV  F   LT LP +E  +       KEIN AK++
Sbjct: 265 GAVWLDEEKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTAECRKLGKGKDAKEINHAKEV 324

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EIT ++HG E+A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G 
Sbjct: 325 LAYEITKLIHGEEKAKEALEASKALFSGAGDESAMPTTEIEKEEL--PMGILTLLTKLGL 382

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             S ++AR  +K   + IN+  I++ + +I    F+ 
Sbjct: 383 TKSNSQARDSVKGGGVSINDEKITDPRFEINEDLFED 419


>gi|313901028|ref|ZP_07834516.1| tyrosine--tRNA ligase [Clostridium sp. HGF2]
 gi|312953986|gb|EFR35666.1| tyrosine--tRNA ligase [Clostridium sp. HGF2]
          Length = 411

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 139/419 (33%), Positives = 216/419 (51%), Gaps = 20/419 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
                  L  RG I+ +++P+ L+   + G +T YIG D T  SLH GH + L+    L+
Sbjct: 1   MMKLFDELKYRGLINDVTSPQ-LEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLK 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI L+GG T  IGDP      R M+  + ++ N + +     +   +        
Sbjct: 60  EHGHHPIMLVGGATGFIGDPKA-SGERNMLTKEVLEHNYQCLSKQIEALFGFEM------ 112

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  W   I  ID LR+ G +F+VN M++ E+V+ RL  +  +S+ EF+YMILQA DF
Sbjct: 113 -VNNLDWTKDISVIDFLRDYGKYFNVNYMINKETVKRRL--DAGISYTEFSYMILQALDF 169

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLS 242
           + L ++  C LQ+GG DQWGNI  G++L  +     +  + LT PL+T A GTK GK+ S
Sbjct: 170 LHLYEDKGCTLQLGGQDQWGNITSGLELIRKKHGADVECYGLTMPLITKADGTKFGKSES 229

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G +WL+K  TS Y  +Q+  N +D  V+ + K+LT L   EID             EA+K
Sbjct: 230 GTVWLDKHKTSAYEMYQFLVNSEDEKVIDYLKKLTFLSKEEIDALEEKVKTEPHFREAQK 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTL 355
            +A E+ T +HG EE  KA       F  +I       +          E++  + L   
Sbjct: 290 TLAKEVVTFLHGEEEYNKALKITNALFKGNIKELDAGELQDALKGFEAAEIADELTLTDT 349

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V+AG A+S  EAR  +   +I+IN   + + +  +  ++  S G   +  GK+N+ + 
Sbjct: 350 LVQAGIASSKREAREWINQGSIQINGDKVKDVEFIVSSKNAISKGRTLIKKGKRNYFVI 408


>gi|330447447|ref|ZP_08311096.1| tyrosyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491638|dbj|GAA05593.1| tyrosyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 395

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +   + I  +RG    I     ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MANIEQALVEI--KRGVDELIPEAELIEKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVTFLIGDFTGMVGDPTGKNVTRPPLTREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +   + +  + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 116 -KTKIAFNSTWLSELGA-EGMIRLASNQTVARMLERDDFKKRYTENRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I +     +P   +    +I D  + S+ + L+  PMSEI++        K   +
Sbjct: 230 SANNYIGIA---DAPSEMFGKIMSISDDLMWSYFELLSFRPMSEIEQFKADVAAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H  EEAE A    +  F        MP       E   G+ +  L+ 
Sbjct: 287 VKFLLAKEIIARFHSEEEAEAALQEFISRFQKGNLPDEMPEF-----EFEAGLPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST++A R ++  A+K +   + + KL          GN     GK+      +
Sbjct: 342 EAALVNSTSDAMRMIRQGAVKQDGEKVEDTKLVPAA------GNYVFQVGKRKFARVTI 394


>gi|319776501|ref|YP_004138989.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317451092|emb|CBY87325.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 395

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDIHT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLTSNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +    +GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   ++N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVNNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|313665522|ref|YP_004047393.1| tyrosine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949275|gb|ADR23871.1| tyrosine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 414

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 217/422 (51%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K+  L  L  RG I QI+N  ++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNSILEELKWRGLIKQITNESKILDAQNNND-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G KPI+L+GG T +IGDPSF+   R +   Q++  NI KI       I         
Sbjct: 60  ALQGFKPIALIGGATGMIGDPSFKANERALQTKQQVDHNINKISAQLKEIIP------TV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN  WL +I  ID LR IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQA+D
Sbjct: 114 SFVNNRDWLENISLIDFLRGIGKHFNLSYLLAKESIATRV--QTGLSVTEFCYTMLQAFD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID          K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTVNKNNKAAGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +I+++ K   ++      +
Sbjct: 232 SGAVWLDKSKTSEYEFYQFWINQTDEDSINLLKCLTFLTKDQIEQLIKQHNQQPSKRLLQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS-----IHSQHMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA       F  +          M   S+   ++++   ++ 
Sbjct: 292 KTLASEMTKFVHQQQGLDKALKLTEAFFSGNLFSLTDDLFKMALNSLPNTQINKTTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + + 
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LI 413


>gi|222056668|ref|YP_002539030.1| tyrosyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565957|gb|ACM21929.1| tyrosyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 403

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/412 (24%), Positives = 183/412 (44%), Gaps = 27/412 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  +     ++ L         +    G+D TA  LH GH   L  L   Q+ 
Sbjct: 8   EIIKRGAVEILLEKELVEKLEKSSATGVPLRVKAGFDPTAPDLHLGHTVLLHKLRQFQQL 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +          ++
Sbjct: 68  GHEIYFLIGDFTGMIGDPTGKSETRKVLSREDVLKNAETYKEQVFKILDP----EKTKVV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +     +  + S ++V RML  E   +R   +Q +S  EF Y ++Q YD V 
Sbjct: 124 FNSEWLAKLSA-SDMIGLASKYTVARMLEREDFNNRFSNQQPISIHEFMYPLIQGYDSVA 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L           +T PLL       KM K+L   I
Sbjct: 183 LK----ADVELGGTDQKFNLLVGRELQREWGQSPQTVITMPLLEGLDGVNKMSKSLGNYI 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKII 302
            +N+        +    ++ D  ++ + + L+ + M+ + ++            EAKK +
Sbjct: 239 GINEPAD---EIFGKIMSVSDELMLRYYELLSDMSMAALQQLKVDLKSGTVHPMEAKKRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
             E+    HG+E A +A  + ++ F  +     MP I ++  +    + L  L+ +AG  
Sbjct: 296 GREMVARFHGQEAAAEAEESFVKRFRDNQTPDDMPEIQMAAGDGK--ILLARLLAEAGLV 353

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S +E RR ++   +K++   I++E L+I        G + L  GK+     
Sbjct: 354 KSNSEGRRSIQGGGVKVDGEKINDENLEIPSA-----GQVILQVGKRRFAKV 400


>gi|71892149|ref|YP_277881.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|97197550|sp|Q492T7|SYY_BLOPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71796255|gb|AAZ41006.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 427

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 157/425 (36%), Positives = 227/425 (53%), Gaps = 10/425 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D + +L ER  I QI+N   L  +     +T Y G+D T+ SLH GHL  L+ L
Sbjct: 1   MNNKNIDIIQLLYERDLIAQITNQEALIKILKSKSITLYCGFDPTSDSLHIGHLVPLLCL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
              Q  GH+PI L+GGGT +IGDPSF+D  R++   + +Q+ IEKIK   S F+ +    
Sbjct: 61  RQFQIFGHRPIILLGGGTGLIGDPSFKDSERKLNLIETVQKWIEKIKYQVSLFVDFSHSQ 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMI 178
            + A ++NN  WL SI  +  LR+IG FFSVN+M++ ++++ RL+     +S+ EF+Y +
Sbjct: 121 YSQACIVNNYDWLSSISLLTFLRDIGKFFSVNKMINKDAIKKRLQKNNYGISYTEFSYNL 180

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+YDF  L KNY+  LQ+GGSDQWGNII GIDL  R+     + LT PLLT +  TK G
Sbjct: 181 LQSYDFTYLHKNYNAILQIGGSDQWGNIISGIDLIHRIYKRTTYGLTMPLLTKSDNTKFG 240

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEIN 296
           KT    IWL+ + TSPY F+QYW N  D +V  F K  T + +  I+  +          
Sbjct: 241 KTEKHTIWLDAKKTSPYTFYQYWINTSDEEVYRFLKFFTNIDVDAINTLKKEDKMKNTKP 300

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGM 350
           +A+ I+A EIT +VHG+   + A       F   IH   +          I    +  G+
Sbjct: 301 QAQIILAEEITRLVHGKSGLKTAQKITRNLFTGQIHKLTLDDFEQLFQDGIPTVPLKAGI 360

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V++    S  +AR  + SN+I +N+      +      D        L  GKK+
Sbjct: 361 TLQQALVESKLVVSRAQARELISSNSITVNSKKQLKTEYIFCATDRLYNRFTLLRRGKKH 420

Query: 411 HIICH 415
           H +  
Sbjct: 421 HCLIT 425


>gi|224824111|ref|ZP_03697219.1| tyrosyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603530|gb|EEG09705.1| tyrosyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 406

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 89/408 (21%), Positives = 172/408 (42%), Gaps = 22/408 (5%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
            +RG    +     +  L     +    G+D TA  LH GH   L  +  LQ  GH+ + 
Sbjct: 18  IKRGAEEVLIEAELIAKLKENRPLRVKAGFDPTAPDLHLGHTVVLTKMRQLQDLGHRIMF 77

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T +IGDPS ++ +R  +  ++IQ N +         +          +  N  WL
Sbjct: 78  LIGDFTGMIGDPSGKNTTRPPLTPEQIQINAKTYAEQVYKILDPA----KTEICFNSKWL 133

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +     +  + +  +V RML  +    R    Q ++  EF Y ++Q YD V +     
Sbjct: 134 GELGA-AGMLRLAAGSTVARMLERDDFHKRFHGNQPIAIHEFMYPLMQGYDSVAMQ---- 188

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L ++        +  PLL       KM K+L   I + +  
Sbjct: 189 ADIELGGTDQKFNLLMGRTLQQQHGQKPQCVIMMPLLEGLDGVNKMSKSLGNYIGIAEPA 248

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           +     +    +I D  +  + + ++  P++EI +  +   +G+   + K ++A E+   
Sbjct: 249 S---EIFGKVMSISDTLMWRYYELVSFRPLNEIAQFKQEVAEGRNPRDIKVLLAQELVAR 305

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  + A  A       F  +     +P ++++ D     M +  ++ +A    ST+EA 
Sbjct: 306 FHSEQAAIDALADFEARFQKNAIPDDLPEVTVTLD--GAAMAIGNVLKEAQLVASTSEAL 363

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R ++   +K++   + ++ LQ+     D    + L  GK+      L 
Sbjct: 364 RMIQQGGVKVDGEKVEDKGLQL-----DRGVTVVLQVGKRKFARVTLA 406


>gi|325578247|ref|ZP_08148382.1| tyrosine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159983|gb|EGC72112.1| tyrosine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 395

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 104/420 (24%), Positives = 174/420 (41%), Gaps = 28/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKIKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GHDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P + +    +I D  +  +   L+  P++EI         GK   +
Sbjct: 230 SLGNYIGVT---DAPSDMFGKIMSISDELMWDWYNLLSFRPLTEIAELKAEVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    AE A    +  F        MP  +         +GL TL+ 
Sbjct: 287 VKILLAKEIIARFHDEAAAEAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   ST+EA R  K   +KIN   + + K           G      GK+      + 
Sbjct: 342 EAGLVPSTSEAIRSAKQGGVKINGEKVEDMKAN------APKGTNVYQVGKRKFARVTIA 395


>gi|297616908|ref|YP_003702067.1| tyrosyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144745|gb|ADI01502.1| tyrosyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 405

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 112/426 (26%), Positives = 188/426 (44%), Gaps = 31/426 (7%)

Query: 1   MPAFKSDFLSILS--ERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHL 54
           M       +  L   +RG    +     L  L +       + A +G D TA  +H GH 
Sbjct: 1   MDDVSQKAMEQLRLLKRGTAEILPEDEFLKKLENSIRNQKPLRAKLGLDPTAPDIHLGHS 60

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             L  L   Q  GH+   ++G  T  IGDPS + E+R+ +  +E+ +N    +      +
Sbjct: 61  VVLNKLRQFQDLGHEVHLIIGDFTGRIGDPSGKSETRKQLSEEEVIQNARTYEMQIFKIL 120

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                K+   +  N  WL  +++ D++   G + +V RM+  E    R K    +S  EF
Sbjct: 121 D----KSKTYIYFNSEWLSRMRFADVINLAGKY-TVARMMEREDFSRRFKEGIPISVHEF 175

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TAS 233
            Y ++Q YD V L       +++GG+DQ  N++ G DL +        AL  P+L  T  
Sbjct: 176 LYPLMQGYDSVVLR----ADVELGGTDQKFNLLVGRDLQKEYGQEPQIALMMPILEGTDG 231

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKL 290
             KM K+L   I +N++    Y       +I D+ +  + + +T +PM    EI+   K 
Sbjct: 232 VQKMSKSLGNYIGINEDANEMYGKT---MSIPDSLITRYFELVTRVPMEEITEIETAIKS 288

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                 +AK  +A EI  M HG+EEA +A       F        +   +IS    +  +
Sbjct: 289 GRMNPRDAKMRLAREIVRMYHGQEEAYRAEERFKLVFQQREIPDDIEEFTIS----TNPI 344

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +  L+V+AG   ST+EA+R +K  A+K++   I +E   + L+D        +  GK+ 
Sbjct: 345 WVGKLLVEAGLCPSTSEAKRMVKQGAVKVDGKRIEDEDANLALEDGQ-----VIQVGKRR 399

Query: 411 HIICHL 416
            +   +
Sbjct: 400 FVRIRV 405


>gi|82701636|ref|YP_411202.1| tyrosyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|115305810|sp|Q2YBR1|SYY_NITMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|82409701|gb|ABB73810.1| tyrosyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 403

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 178/420 (42%), Gaps = 23/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    S+ + I+  RG    +        L     +    G+D TA  LH GH   L  +
Sbjct: 1   MTIPISEQIEIIK-RGCSELLLEDELEQKLAQNRPLRIKAGFDPTAPDLHLGHTVLLNKM 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH  + L+G  T +IGDPS ++ +R  +  +++ EN +  +      +K     
Sbjct: 60  RHLQDLGHHALFLIGDFTGMIGDPSGKNTTRPPLSREQVAENAKSYQDQVFRILKP---- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W+  +   DL++   +  +V RML  +    R +  + ++  EF Y ++Q
Sbjct: 116 EQTEVVFNSAWMDRLNAADLIKLAATH-TVARMLERDDFGKRYQSNKPIAIHEFLYPLIQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L +         +T PLL       KM K
Sbjct: 175 GYDSVALR----ADIELGGTDQKFNLLMGRELQKHFGQASQCVITMPLLEGLDGVNKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I + +   SP N +    +I D  +  + + L+  P+  + +  +    G+   +
Sbjct: 231 SAGNYIGITE---SPGNMFGKLMSISDELMWRYIELLSFEPLRVVRQWQQDVGNGRNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K + A EI T  H R++AE A       F        +P   +       G+ +  L+ 
Sbjct: 288 IKVLFAQEIVTRFHSRQDAEAALADFESRFRRGGIPDDLPENILQAG--KEGLPIAQLLK 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + G   ST EA R ++   +K+N   +S++  ++          + +  GK+      +C
Sbjct: 346 QTGLTASTTEALRMIEQGGVKLNGEKVSDKTFRLSC-----GQMVIVQVGKRKFARVTIC 400


>gi|119899046|ref|YP_934259.1| tyrosyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|119671459|emb|CAL95372.1| TyrS protein [Azoarcus sp. BH72]
          Length = 399

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 176/419 (42%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++     L +RG    +     ++ L S   +    G+D TA  LH GH   +  L
Sbjct: 1   MTDVQAAI--ELIKRGADELLIEAELVEKLKSGRPLRIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ + L+G  T +IGDPS ++ +R  +  ++I EN +  +      +      
Sbjct: 59  RHFQELGHQVLFLIGDFTGMIGDPSGKNATRPPLSREQILENAKTYQDQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+        +  + +  +V RML  +    R    QS++  EF Y + Q
Sbjct: 116 -KTEICFNSAWM-EGLGSAGMIRLAAQQTVARMLERDDFSKRYANNQSIAIHEFLYPLCQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +       +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAMK----ADVELGGTDQRFNLLMGRELQKHYGQAPQCVLMMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P   +    ++ D  +  +   L+    +EI   R     G+   +
Sbjct: 230 SLGNYIGIAEA---PKEIFGKTMSVSDQLMWRYYDLLSFRSTAEIARLRSEVEGGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    HG+  A++A       F  +     +P + +S    + G+ +  ++ 
Sbjct: 287 VKVMLALELVARFHGQLAADEALADFEARFQRNAIPDDLPEVRVSVG--AEGLPVFQVVK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   +T+EA R +   A+++N   + ++ L +   D      + L  GK+      L
Sbjct: 345 QAGLTGTTSEAIRMIDQGAVRLNGDRVEDKGLVLAAGD-----TVVLQVGKRKFAAVVL 398


>gi|167855747|ref|ZP_02478502.1| alanine racemase [Haemophilus parasuis 29755]
 gi|167853144|gb|EDS24403.1| alanine racemase [Haemophilus parasuis 29755]
          Length = 396

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 175/419 (41%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG     S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQSIETILAELK-RGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 60  RQFQNFGHEVIFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYKEQIYKILDPQ--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  + ++  + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 117 -KTRIVFNSDWLGELGTVGMI-RLASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 175 GHDSVAL----EADIELGGTDQTFNLLIGRELQKAAGQKPQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I + +    P   +    +I D  +  +   L+  P++EI ++       K   +
Sbjct: 231 SLGNYIGVTEV---PNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL TL+ 
Sbjct: 288 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVDDVKQN------AQKGTFVYQVGKRKFARVTV 395


>gi|240950106|ref|ZP_04754401.1| tyrosyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295407|gb|EER46176.1| tyrosyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 396

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 175/419 (41%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG     S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQPIETILAELK-RGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 60  RQFQNFGHEVIFLIGDFTATVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  + ++  + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 117 -KTRIVFNSDWLGELGTVGMI-RLASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 175 GHDSVAL----EADIELGGTDQTFNLLIGRELQKAAGQKPQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I + +    P   +    +I D  +  +   L+  P++EI ++       K   +
Sbjct: 231 SLGNYIGVTEA---PNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL TL+ 
Sbjct: 288 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVDDVKQN------AQKGTFVYQVGKRKFARVTV 395


>gi|153216273|ref|ZP_01950366.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114362|gb|EAY33182.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 434

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 216/432 (50%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSL--SELAQLEL-DGLPCV--------AA 361

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E   +            L  
Sbjct: 362 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQR 419

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 420 GKKKFALIKLEG 431


>gi|113971215|ref|YP_735008.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|113885899|gb|ABI39951.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 408

 Score =  317 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 97/421 (23%), Positives = 179/421 (42%), Gaps = 25/421 (5%)

Query: 2   PAFKSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           PA  +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  
Sbjct: 8   PAEMADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNK 67

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     
Sbjct: 68  LRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA-- 125

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +L
Sbjct: 126 --KTRIEFNSSWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLL 182

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD V L       +++GG+DQ  N++ G +L +         +  PLL       KM 
Sbjct: 183 QGYDSVALK----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMS 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EIN 296
           K+    I +++     +       +I D  +  + + L+  P++EI++  +         
Sbjct: 239 KSAHNYIGVSEPANEMF---GKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGANPR 295

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H +  AE A  A ++ F        +P + ++  E   G+ +  L+
Sbjct: 296 DTKIALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIANLL 352

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A    ST++A R +K +A+K++   + + ++ +               GK+      L
Sbjct: 353 KDADLVGSTSDAMRMIKQSAVKMDGEKVDDSRMTLSA-----GTVAVFQVGKRKFAKVTL 407

Query: 417 C 417
            
Sbjct: 408 V 408


>gi|223041527|ref|ZP_03611728.1| tyrosyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017622|gb|EEF16032.1| tyrosyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 396

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 175/419 (41%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG     S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQPIETILAELK-RGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 60  RQFQNFGHEVIFLIGDFTATVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  + ++  + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 117 -KTRIVFNSDWLGELGTVGMI-RLASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 175 GHDSVAL----EADIELGGTDQTFNLLIGRELQKAAGXKPQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I + +    P   +    +I D  +  +   L+  P++EI ++       K   +
Sbjct: 231 SLGNYIGVTEA---PNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL TL+ 
Sbjct: 288 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVDDVKQN------AQKGTFVYQVGKRKFARVTV 395


>gi|153828422|ref|ZP_01981089.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|148876131|gb|EDL74266.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 434

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 214/432 (49%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-KYGTGKTDALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +          + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVSDLSQQITHLMASQSENPAQLITV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSL--SELAQLEL-DGLPCV--------AA 361

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E   +            L  
Sbjct: 362 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQR 419

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 420 GKKQFALIKLEG 431


>gi|293977785|ref|YP_003543215.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667716|gb|ADE35351.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 423

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 146/430 (33%), Positives = 227/430 (52%), Gaps = 24/430 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L   Q
Sbjct: 1   MNNLIQELLWRGLIHDTTYSEQIK----NEIITLYTGFDPTYKSLHIGNLVAIIMLIHFQ 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K+G+  IS++GGGT +IGDPS ++  R + + + +  NI  +K   S +I +   K +  
Sbjct: 57  KSGNNIISVIGGGTGMIGDPSGKNCERILKKKELLYNNIFYLKKQLSLYIDFNYPKNEI- 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            LNN  WL    +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQAYDF
Sbjct: 116 -LNNYEWLKKKLFIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQAYDF 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS-G 243
           + L K  +C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +  
Sbjct: 175 IYLYKEKNCSLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGE 234

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            IW++  +TSPY F+Q+W NI D     + K  T L   EI  +      +      +K 
Sbjct: 235 NIWIDPNLTSPYEFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKLIQKK 294

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDEVSRG 349
           +A+EIT  +HG++  EK    +   F+                 +++P   I     +  
Sbjct: 295 LASEITIFIHGKKTFEKIKFISNILFNKKKIINEINKNYIIFIYKNIPHKKIYIYH-NFN 353

Query: 350 MGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           + ++ L+V K+ F  S  EA R LK N+I IN   I +EK  +   D  S   + L  GK
Sbjct: 354 IPIIDLLVNKSKFLKSKKEAIRQLKLNSIYINKKNI-DEKFILNKNDLISGTYVLLQKGK 412

Query: 409 KNHIICHLCG 418
           KN  +  + G
Sbjct: 413 KNFFMIKIYG 422


>gi|91794161|ref|YP_563812.1| tyrosyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716163|gb|ABE56089.1| tyrosyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 398

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 176/417 (42%), Gaps = 25/417 (5%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L  L     +   +G D TA  +H GH   L  +  
Sbjct: 1   MADLDQVLAEIKRGTDEILLEADLLAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRT 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALK----ADVELGGTDQKFNLLMGRELQKAEGQKPQTVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++            + K
Sbjct: 232 HNYIGVSEPANEMF---GKIMSISDDLMWRYYELLSFRPLAEIEQFKADVANGTNPRDVK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI    H   +A+ A  A ++ F        +  I++   E   G+G+  L+  A
Sbjct: 289 IALAKEIIARFHDEAQAQSAHQAFIDRFQKGAIPDDIEEITL---EAGEGLGVANLLKDA 345

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G  +ST+EA R +K  A+K++   + +       Q F +        GK+      L
Sbjct: 346 GLVSSTSEAMRMIKQGAVKMDGEKLED-----SRQTFAAGLEAVFQVGKRKFAKVTL 397


>gi|78355275|ref|YP_386724.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|115305805|sp|Q316W7|SYY_DESDG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78217680|gb|ABB37029.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 395

 Score =  317 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 166/406 (40%), Gaps = 25/406 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    I        L     +    G+D TA  LH GH   +  L   Q+ GH  I L+
Sbjct: 10  RGSAEFIDEEELKKKLAKGRPLRVKAGFDPTAPDLHLGHTVLIHKLRHFQELGHTVIFLI 69

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDPS R E+R  +  +++ +N E  K      +          +  N  W+  
Sbjct: 70  GDFTGMIGDPSGRSETRPPLTREQVLQNAETYKKQVFKILDP----EKTEVRFNSEWMDK 125

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
               D +  + S ++V RML  +    R +   ++S  EF Y ++Q YD V L    +  
Sbjct: 126 FGAADFI-RLASRYTVARMLERDDFEKRYRSNMTISIHEFLYPLVQGYDSVAL----EAD 180

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G  L  +        LT P+L       KM K+L   + +++    
Sbjct: 181 VELGGTDQKFNLLVGRHLQSQEGQEPQCVLTVPILEGLDGVKKMSKSLGNYVGIDEP--- 237

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMV 310
           P + +    ++ D  +  + + +TT  + EI  + +           AK+ +A  IT   
Sbjct: 238 PADMFGKLMSVSDELMWRYYELITTKTLDEIAELQRRVASGELHPKTAKEELAEHITAQY 297

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG ++A +A       F        MP  S S  E S        +  +G A S  EA+R
Sbjct: 298 HGSDKAAEARQGFNAVFAQGCVPDDMPEFSCSCGEDSTP---PAFLADSGLAGSRGEAKR 354

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +K  A+ ++   + +    +        G   +  GKK  +   +
Sbjct: 355 LIKQGALSLDGEKLDDPNTPLTA------GEYVVRLGKKRFLRLIV 394


>gi|39996241|ref|NP_952192.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81702779|sp|Q74E25|SYY_GEOSL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39983121|gb|AAR34515.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505252|gb|ADI83975.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 403

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/412 (24%), Positives = 177/412 (42%), Gaps = 27/412 (6%)

Query: 12  LSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L +RG +  +      +       +   +    G+D TA  LH GH   L  +   Q+ G
Sbjct: 9   LIKRGAVEILVEKELEEKLEKSAKTGVPLKIKAGFDPTAPDLHLGHTVLLHKMRQFQQLG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+G  T +IGDP+ + E+R+ +  +++  N E  K      +          +  
Sbjct: 69  HEVIFLIGDFTGMIGDPTGKSETRKALSREDVLRNAETYKEQVFKILDP----EKTRVAF 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +     +  + + ++V RML  +    R   +  +S  EF Y ++Q YD V L
Sbjct: 125 NSEWLAKLDA-GGMIGLAAKYTVARMLERDDFGKRFANQLPISIHEFLYPLIQGYDSVAL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G +L           +T PLL       KM K+L   I 
Sbjct: 184 Q----ADVELGGTDQKFNLLVGRELQREWGQTPQTVITMPLLEGLDGVNKMSKSLGNYIG 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIA 303
           +N+        +    +I D  ++ + + L+ L M+EID M    +       EAKK + 
Sbjct: 240 INEPAD---EIFGKIMSISDELMLRYYELLSDLSMAEIDGMRTGIRDGSVHPMEAKKQLG 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+    HG   A  A    ++ F  +     MP ++++  +    + L  L+ +AG   
Sbjct: 297 REVVARYHGAAAATDAEEHFVKRFRDNQTPDEMPELTLAATD--EKVALCRLLAEAGLVK 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S +E RR ++   +K+N   +S+E L++        G   + FGK+      
Sbjct: 355 SNSEGRRAIQQGGVKVNGEKVSDESLELAAT-----GVYVIQFGKRRFARIT 401


>gi|331703663|ref|YP_004400350.1| Tyrosine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802218|emb|CBW54372.1| Tyrosine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 414

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 148/422 (35%), Positives = 223/422 (52%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K+  L  L  RG I QI+N  ++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNSILEELKWRGLIKQITNESKILDAQNNND-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQIIP------NV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL +I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSNISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID          K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    +   +  +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQPSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKA-----ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA     A  + + F ++     M   S+   ++++ + ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTKAFFSGDLFSLTDDLFKMALNSLPNTQINKDIKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + + 
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LI 413


>gi|195380215|ref|XP_002048866.1| GJ21079 [Drosophila virilis]
 gi|194143663|gb|EDW60059.1| GJ21079 [Drosophila virilis]
          Length = 464

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 133/445 (29%), Positives = 213/445 (47%), Gaps = 32/445 (7%)

Query: 3   AFKSDF----LSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
            FK +     L  LSERGF   I   +   +L  L  +   T Y G+D TA SLH G+L 
Sbjct: 18  NFKRNLTHKNLLELSERGFFQSIFPDTAAPKLKELFERSAQTIYAGFDPTADSLHVGNLL 77

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +M L   Q+ GHKPI+L+GG T +IGDPS R   R  +    +  N++ I+       K
Sbjct: 78  VIMGLLHCQRAGHKPIALVGGATGLIGDPSGRKTERNQLGESVLDANLQAIERQLRKVFK 137

Query: 116 YGT-----------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
                               ++NN  W  ++  ID +  +G  F +  MLS  SV+SRL+
Sbjct: 138 NHEDCLWDTRKNRSPLAPLTIVNNAEWYANLNLIDFVANMGRHFRMGSMLSRSSVQSRLE 197

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFA 223
            E  +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R  +  ++F 
Sbjct: 198 SEDGMSFTEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQMGNLMTGHELISRVERNREVFG 257

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           +T P++T   G K GK+   A+WL++  TSP+  +Q++  + D++V    K  T +P+ E
Sbjct: 258 MTLPIVTNEEGDKFGKSAGNAVWLDENKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPE 317

Query: 284 IDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTIS 340
           ++++ +      E  +A+ ++A ++T +VHG    ++A       +  ++     +    
Sbjct: 318 VEQLMREHAKEPEKRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELNYAE 377

Query: 341 ISKD---------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           I +              GM +L L +KA    +  +A R + +    IN   + N    I
Sbjct: 378 IKQTFQGAAVVDILTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYINQKRVQNIAEVI 437

Query: 392 KLQ-DFDSTGNIKLSFGKKNHIICH 415
                    G   L  GK+N  I  
Sbjct: 438 TTGIHILRNGVSLLRVGKRNFYIVR 462


>gi|56461336|ref|YP_156617.1| tyrosyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81362512|sp|Q5QVP5|SYY_IDILO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56180346|gb|AAV83068.1| Tyrosyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 401

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 100/418 (23%), Positives = 191/418 (45%), Gaps = 24/418 (5%)

Query: 4   FKSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            K++    ++E  RG    +      + L S   +T   G+D TA  LH GH   +  L 
Sbjct: 1   MKTEVAEAIAEITRGAEEVLLEQELAEKLASGKPLTVKAGFDPTAPDLHLGHTVLINKLR 60

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GHK + L+G  T +IGDP+ ++ +R+ + ++++  N E  K      +       
Sbjct: 61  VFQDFGHKVVFLIGDFTGMIGDPTGKNVTRKPLTTEQVIANAETYKEQVFKILDPA---- 116

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  W+  +   D+++ + +  +V RML  +  + R +  QS++  EF Y ++Q 
Sbjct: 117 KTEIRFNSEWMSKMGAADMIK-LAARQTVARMLERDDFKKRYQNNQSIAIHEFLYPLVQG 175

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKT 240
           +D VEL       +++GG+DQ  N++ G +L +         + +PLL       KM K+
Sbjct: 176 WDSVELK----ADVELGGTDQRFNLLMGRELQKEEGQRPQTVIMTPLLEGLDGVQKMSKS 231

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEA 298
           L+  I + +      + +    ++ D  +  + + L+   ++EID +      GK   + 
Sbjct: 232 LNNYIGITEP---ANDMFGKIMSVSDELMWRYFQLLSFRSITEIDELKAAVADGKNPRDV 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K ++A EI    H  ++AEKA    ++ F  +     +P  ++     + GM +  ++ +
Sbjct: 289 KVLLAKEIIARFHSEDDAEKAEQDFIQRFQKNALPDDIPEKTVQVG--AEGMAIGNVLKE 346

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AG   ST+EA R +K NA+K++    S+ +     +D           GK+     +L
Sbjct: 347 AGLVESTSEALRMIKQNAVKVDGEKFSDSRYLCTEKDSG-----VYQVGKRRFAKINL 399


>gi|328948364|ref|YP_004365701.1| Tyrosyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448688|gb|AEB14404.1| Tyrosyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 410

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 133/415 (32%), Positives = 209/415 (50%), Gaps = 16/415 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG +  ++    +    +   +T Y G D TA SLH GH + L+    L + G
Sbjct: 3   FFEELQWRGLVKDVAGED-IADKLNNEKITFYWGTDPTADSLHLGHYSSLVTAKRLARAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP      R ++  + +++N+  IK       +       A ++N
Sbjct: 62  HHPILLVGGSTGLIGDPRP-TAEREIISHETLEKNLAGIKSQVDRIFE-----GKAEIVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W     +++ LR+IG + +VN MLS E +  RL  +  ++F EF+Y +LQ YDF+ L
Sbjct: 116 NYDWTKDYTFLEFLRDIGKYINVNYMLSKEIISRRL--DTGITFAEFSYTLLQGYDFLWL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N +C LQ  G+DQWGNI  G++L  +++  + +  T PL+    G K GK+   A+WL
Sbjct: 174 YRNKNCILQAEGADQWGNITTGLELIRKIEGKEAYGFTMPLVLDKYGNKFGKSAGNALWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATE 305
           +   TS Y  +QY  N+DD+ VV + K  T L   +I+ +     +  E+ EA K +A E
Sbjct: 234 DLNKTSSYELYQYLVNVDDSMVVDYLKIFTFLSKEQIEELEAKNKEHPELREAHKALARE 293

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE-----VSRGMGLLTLIVKAG 360
           I T +HG  E  KA   +   F   + S  +  I I   +     +S G  L+ ++V   
Sbjct: 294 IITDLHGAAEFVKAVNISSSLFSGDVKSLSLKDIEIGFKDVPTISISEGEKLIDVLVNNK 353

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EAR  L + +I +N    ++E + +  Q       I L  GKK + I  
Sbjct: 354 IASSKREAREFLAAGSITLNGEKFTDENMPVTSQLAIEGKVIVLRRGKKKNYIVK 408


>gi|167622979|ref|YP_001673273.1| tyrosyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167353001|gb|ABZ75614.1| tyrosyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 398

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 173/420 (41%), Gaps = 25/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLEQALAEI--KRGTDEILLEADLLEKLKEGRPLKIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIEFNSTWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKSAGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++     +       +I D  +  + + L+  P++EI++            +
Sbjct: 230 SAHNYIGVSEPAGEMF---GKIMSISDVLMWRYFELLSFRPLTEIEQFKADVEAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    +  F        +  + I+  E   G+ +  L+ 
Sbjct: 287 VKIALAKEIIARFHDEASAEAAHQEFISRFQKGNIPDDIEELEIAAGE---GIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG  +ST++A R +K  A KI+   I + +LQ+               GK+      L 
Sbjct: 344 EAGLVSSTSDAMRMIKQGAAKIDGDKIEDTRLQLTA-----GTTAVFQVGKRKFAKITLI 398


>gi|261491655|ref|ZP_05988237.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494226|ref|ZP_05990726.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310129|gb|EEY11332.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312670|gb|EEY13791.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 396

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 171/419 (40%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG  +  S    +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQAIESVLAELK-RGVENIYSEEDLITKLKENRPLRIKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 60  RQFQQFGHEVYFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNAETYKEQIFKILDPQ--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  E  ++R   +Q ++  EF Y +LQ
Sbjct: 117 -KTKIVFNSEWLGKLGT-EGMIRLASNYTVARMLEREDFKNRFTNQQPIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D VEL       +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 175 GHDSVELK----ADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +L   I + +    P   +    +I D  +  +   L+  P+ EI ++           +
Sbjct: 231 SLGNYIGVTEA---PSEMFGKIMSISDDLMWDWYNLLSFRPLDEIAQLKADVENGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    A+ A    +  F        +P  +         +GL  L+ 
Sbjct: 288 VKILLAKEIIARFHDEAAADAAEQEFVNRFQKGAIPDEVPEFT-----FEGEIGLAALLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVEDVKQT------AQKGTFVYQVGKRKFARITV 395


>gi|148273171|ref|YP_001222732.1| hypothetical protein CMM_1990 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831101|emb|CAN02046.1| tyrS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 434

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 137/419 (32%), Positives = 214/419 (51%), Gaps = 12/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D    +  RG++H  ++   L  L S   +T Y G+D TA SLH G+L QL+L+  LQ  
Sbjct: 20  DVWEEIVWRGYVHVSTDQDALKELLSGPPITYYCGFDPTAPSLHLGNLVQLLLMRRLQLA 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T +IGDP      R +   + + + + +++   S+F+    G     ++
Sbjct: 80  GHRPLGLVGGSTGLIGDPRP-TAERTLNDPEVVADWVGRVQAQVSAFLSPE-GDNAVRIV 137

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LRE+G  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ  DF E
Sbjct: 138 NNLDWTAPMSAIDFLREVGKHFRVGTMLKKDAVSARLNSDEGISYTEFSYQILQGLDFRE 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G DL  R +     A+ +PL+T + GTK GK+   AIW
Sbjct: 198 LHRTYGCVLQTGGSDQWGNLTSGTDLIRRSERTTAHAIGTPLITNSDGTKFGKSEGNAIW 257

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           L+ E+TSPY F+Q+W N +D DV+   +  T L  + I+    A        EA++ +A 
Sbjct: 258 LDAELTSPYAFYQFWLNTEDGDVIQRLRLFTFLDRARIEELARAVESEPFRREAQRTLAW 317

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLIVK 358
           E+T++VHG E  E A   A   F     +    PT+      +   ++  G  ++  ++ 
Sbjct: 318 EVTSLVHGIEATESAIAGAQALFGQGELTALDEPTLRAAMGELPSAQIPAGTTVIQALID 377

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            G  +S+ EARR +    + +NN   +       +          +  GKK      + 
Sbjct: 378 TGLVSSSGEARRAITQGGVYVNNV--AVGDAAAVVDALLHGRFAVIRRGKKTLAGVTVA 434


>gi|256383894|gb|ACU78464.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384725|gb|ACU79294.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455264|gb|ADH21499.1| tyrosine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 414

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 223/422 (52%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++ L  L  RG I QI+N  ++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNNILEELKWRGLIKQITNESKILDAQNNSD-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQIIP------NV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL SI  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSSISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID          K   LT  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGLTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    +   +  +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQPSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKA-----ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA     A  + + F ++     M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTDDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + + 
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LI 413


>gi|197121511|ref|YP_002133462.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|254783566|sp|B4UGQ8|SYY_ANASK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|196171360|gb|ACG72333.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 420

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 149/425 (35%), Positives = 229/425 (53%), Gaps = 19/425 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + L  L  R  +H  +    L    +QG +T Y+G+D TA SLH GHL  +M L WLQ
Sbjct: 1   MQNLLEALVSRSLVHDQTP--GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A 
Sbjct: 59  RCGGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSFE-GQNAAR 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL +I  ++ LR++G  F+VN ML+ +SV+ R+  E  +SF EF+Y ++QAYDF
Sbjct: 118 VRNNADWLRAIGLMEFLRDVGKHFTVNYMLAKDSVKGRM--ESGISFTEFSYQLIQAYDF 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L ++  C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA
Sbjct: 176 WHLFRSEKCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+   TSPY F+Q+W N DD DV    K  T L + +I      + +      A++ +
Sbjct: 236 VWLDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSVEDIAALLAEQARDPGKRPAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A ++T  VHG +       A+   F  +                +P+ +++ DE++  + 
Sbjct: 296 AEDVTARVHGPDVTRSVIEASRILFGGTDLRAASADVLDVLAGEIPSAAVTGDELAA-LT 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  L+VK G A S  E RR +      +N +++ +   ++   D  + G   L  GK+N+
Sbjct: 355 IADLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGDLLAGGYALLQKGKRNY 414

Query: 412 IICHL 416
            +  +
Sbjct: 415 ALVKV 419


>gi|225847897|ref|YP_002728060.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643257|gb|ACN98307.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 403

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 181/411 (44%), Gaps = 23/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ++G +  IS    LD L     +    G+D TA  LH GH   L  L   Q+ GH   
Sbjct: 10  LIKKGTLEIISEEELLDKLKEGRPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTVY 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDPS RD++R  +  Q++ EN +  K      +         +++ N +W
Sbjct: 70  FIIGDFTAMIGDPSGRDQTRPPLTKQQVLENAKTYKEQVFKVLDP----EKTVVVFNSSW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +K  DL++    + +V RML  E  + R K    +S  EF Y +LQAYD V +    
Sbjct: 126 LGEMKAEDLIKLTAKY-TVARMLEREDFKKRFKENIPISIHEFIYPLLQAYDSVAIK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNK 249
              +++GGSDQ  N++ G D+ +         A+  PLL  T    KM K+    I + +
Sbjct: 182 -ADVELGGSDQRFNLLIGRDIQKEYGIEKPQVAILLPLLVGTDGVKKMSKSYGNYIGITE 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
               P + +    +I D  +  + + LT L + EID+M K          E KK +A  I
Sbjct: 241 P---PEDMFGKVMSISDELMWQYWELLTDLTVEEIDKMKKDVESGVLHPMEVKKQLAMYI 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATST 365
               H ++ A KA     +          +P I++    +  + + L  LI     A S 
Sbjct: 298 VERFHDKDSAIKAKEHFEKVHSKKEIPDDIPVINVKDLNIEDKEIELFELIYLLNLAPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EA+R +K   +KI+   + +   ++ L          +  GK+  +   +
Sbjct: 358 AEAKRLIKQGGVKIDGEKVDDFLYKVDLT-----KEHIIQAGKRKFVKLQV 403


>gi|262172421|ref|ZP_06040099.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893497|gb|EEY39483.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 426

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 214/432 (49%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-KYGTGKTDALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +          + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVSDLSQQITHLMASQSENPAQLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSL--SELAQLEL-DGLPCV--------AA 353

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E   +            L  
Sbjct: 354 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQR 411

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 412 GKKQFALIKLEG 423


>gi|329124010|ref|ZP_08252557.1| tyrosine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327467435|gb|EGF12933.1| tyrosine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 395

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 177/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSETDLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAALVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTI 394


>gi|88858216|ref|ZP_01132858.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas tunicata D2]
 gi|88819833|gb|EAR29646.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas tunicata D2]
          Length = 400

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 97/421 (23%), Positives = 177/421 (42%), Gaps = 25/421 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    I  +RG    +     ++ L S   +    G+D TA  LH GH   +  +
Sbjct: 1   MADLQAALAEI--KRGAEEILIEDELIEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  KTFQDLGHEVIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TW+  +    +++ + S  +V RML  +  + R    Q ++  EF Y ++Q
Sbjct: 116 -KTTVAFNSTWMEKLGAAGMIK-LASNQTVARMLERDDFKKRYAGGQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL  T    KM K
Sbjct: 174 GWDSVAL----EADVELGGTDQRFNLLMGRELQKVEGQKPQTVLMMPLLEGTDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I +     SP   +    +I D  +  +   L+ L + +I  +           +
Sbjct: 230 SLGNYIGIT---DSPTEMFGKIMSISDDLMWRYFDLLSALSIDQIAALKADVTAGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H   +AE A    +  F        +P +++  +     + +  L+ 
Sbjct: 287 IKINLAREMIARFHSEADAEAAYQDFINRFQKKALPDDIPEVTVQIE--GDVISIANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINN-SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R +K  A+K+N    IS+ KL+I+              GK+      +
Sbjct: 345 EADLVASTSEAMRMIKQGAVKLNGEEKISDSKLEIQ-----KGSEAIYQVGKRKFAKVIV 399

Query: 417 C 417
            
Sbjct: 400 A 400


>gi|160915069|ref|ZP_02077282.1| hypothetical protein EUBDOL_01077 [Eubacterium dolichum DSM 3991]
 gi|158432868|gb|EDP11157.1| hypothetical protein EUBDOL_01077 [Eubacterium dolichum DSM 3991]
          Length = 410

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 138/417 (33%), Positives = 215/417 (51%), Gaps = 20/417 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +++P  L+   + G +T YIG D T  SLH GH + L+    L++ G
Sbjct: 3   LFDELKWRGLIDNVTSPE-LEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEHG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P+ L+GG T  IGDP      R M+  + ++ N   +         +         +N
Sbjct: 62  HHPLMLVGGATGFIGDPKA-TGERSMLTKEVLEHNYHCLSKQIEELFGFEM-------VN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I  ID LR+IG  F+V+ M++ E+V+ RL  E  +S+ EF+YMILQA+DF+ L
Sbjct: 114 NLDWTKDITIIDFLRDIGKLFNVSYMMNKETVKRRL--ESGISYTEFSYMILQAHDFLHL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAI 245
            +   C LQ+GG DQWGNI  G++L  +     +  + LT PL+T A GTK GK+ +G +
Sbjct: 172 YEEKGCTLQIGGQDQWGNITSGLELIRKKHGADVECYGLTMPLITKADGTKFGKSETGTV 231

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+K  TS Y  +Q+  N +D  V+ + K+LT L   EID + +       + EA+K +A
Sbjct: 232 WLDKNKTSAYEMYQFLLNSEDEKVIDYLKKLTFLKKEEIDTLEECVKTAPHLREAQKALA 291

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVK 358
            E+ T +HG  E  KA   +   F   + +      S       K EV+  + L   +V 
Sbjct: 292 KEVVTFLHGENEYNKAIKISEALFKGDVKTLSSEEASDALKGFEKREVADHITLTEALVS 351

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +G A+S  EAR  +K N+I++N   I++    +  +      +  +  GK+N+ +  
Sbjct: 352 SGIASSKREAREWIKGNSIQVNGEKITDVDFVVSSEHALCHKDTLIKRGKRNYFVIT 408


>gi|293400557|ref|ZP_06644702.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305583|gb|EFE46827.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 407

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 137/416 (32%), Positives = 214/416 (51%), Gaps = 18/416 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I   S+P +++ + +   VT YIG D T  SLH GH +  ++   L++ 
Sbjct: 2   NIYEELVWRGLIKDCSSP-KIENMLNNEKVTFYIGTDPTGDSLHIGHYSSFLISKRLKQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT +IGDP      R M+   E+  N   +K        +        ++
Sbjct: 61  GHNPILLVGGGTGLIGDPKP-TAERAMISKDEVAHNFACLKKQAQDVFGF-------EVV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  I  +D LR+ G +F++N ML+ + V  RL  ++ +++ EF+YMILQA DF+ 
Sbjct: 113 NNYDWIKDINTLDFLRDYGKYFNINYMLNKDIVARRL--DEGITYTEFSYMILQALDFMH 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +N +C +Q+ G DQWGNI  GI+L  +    + +  T PL+T A GTK GK+   AIW
Sbjct: 171 LYENRNCIMQVAGQDQWGNITAGIELIRKKLGKEAYGFTMPLVTKADGTKFGKSEGKAIW 230

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+K  TS Y  +Q+  N +D+ V+ + K LT L   EI+ + +    +    EA+K +A 
Sbjct: 231 LDKNKTSSYELYQFLVNSEDSKVIEYLKTLTFLSREEIEDLEEKTKIDAGRREAQKALAK 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKA 359
            +   +HG EE EKA       F  +I       +           V   M LL ++V+A
Sbjct: 291 AVVIDLHGEEEYEKALKITNAFFKGNIKDLTSDELEDALHGFDSIAVDDRMPLLDVLVQA 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             A+S  EAR  +K  +I+IN   I + +  +      +T    +  GK+N+ +  
Sbjct: 351 KIASSKREAREWIKQGSIQINGERIKDCEFIVSSTHAITTNKTIIKRGKRNYYVIT 406


>gi|330718068|ref|ZP_08312668.1| tyrosyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 417

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 213/417 (51%), Gaps = 15/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DFL  L  RG + Q+++   L      G + AY+G D TASS+H G+L  LM+L   Q  
Sbjct: 2   DFLEDLEWRGSLKQVTDAAGLRKAMQDGQIGAYVGVDPTASSIHIGNLIPLMVLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK + + GGGT  IGDPS +   R ++  ++I +N+E  K  F     +     D  ++
Sbjct: 62  GHKAVIIAGGGTGAIGDPSGKKNERTLLSLEQINDNVEAQKKQFQKLFGHDD---DFSIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   + LR+ G  FSVN M+  + V SRL  +  +SF EF Y ILQ  DF E
Sbjct: 119 NNNDWLGQLTLQEFLRDYGKLFSVNVMIKKDVVASRL--DAGISFTEFTYQILQGIDFHE 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  + RLQ+GGSDQWGNI  GIDL           F +T PL+  + GTK GK+   A
Sbjct: 177 LWRRENVRLQIGGSDQWGNITSGIDLIHTLEGNDAPAFGVTIPLMLNSDGTKFGKSEGNA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N DD DVV + K  T L + EI+   +          A++ +
Sbjct: 237 IWLDAEKTSPYTFYQFWLNQDDRDVVKYLKFFTFLTVDEINELEVEVKDNPGQRLAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTLI 356
           A E+T  VHG+   ++A   +   F  +I    +  I      +   E       ++  +
Sbjct: 297 AQEVTKFVHGQAAVDEAEQLSQALFSGNISDLSVKQIQSVFSGVPSFEAESHAKNIVDFL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           V  G   S  +AR  +++ AI IN   +++   ++  Q       + +  GKK + +
Sbjct: 357 VDGGVEKSKRQAREDVQNGAITINGEKVTDVAFEVDPQSHYEGQYVLVRRGKKKYFL 413


>gi|220916278|ref|YP_002491582.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254783565|sp|B8JFS8|SYY_ANAD2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219954132|gb|ACL64516.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 420

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 150/425 (35%), Positives = 229/425 (53%), Gaps = 19/425 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + L  L  R  +H  +    L    +QG +T Y+G+D TA SLH GHL  +M L WLQ
Sbjct: 1   MQNLLEALVSRSLVHDQTP--GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A 
Sbjct: 59  RCGGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSFE-GQNAAR 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL +I  ++ LR++G  F+VN ML+ +SV+ R+  E  +SF EF+Y ++QAYDF
Sbjct: 118 VRNNADWLRAIGLMEFLRDVGKHFTVNYMLAKDSVKGRM--ESGISFTEFSYQLIQAYDF 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L ++  C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA
Sbjct: 176 WHLFRSEKCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+   TSPY F+Q+W N DD DV    K  T L + EI      + +      A++ +
Sbjct: 236 VWLDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSVEEIAALLAEQARDPGKRPAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A ++T  VHG +       A+   F  +                +P+ +++ DE++  + 
Sbjct: 296 AEDVTARVHGPDVTRSVVEASRILFGGTDLRAASADVLEVLAGEIPSATVTGDELAA-LT 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  L+VK G A S  E RR +      +N +++ +   ++   D  + G   L  GK+N+
Sbjct: 355 VADLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGDLLAGGYALLQKGKRNY 414

Query: 412 IICHL 416
            +  +
Sbjct: 415 ALVKV 419


>gi|89072503|ref|ZP_01159075.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051607|gb|EAR57060.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 395

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +   + I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEQALVEI--KRGVEELIPEAELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +   + +  + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 116 -KTTIAFNSTWLSELGA-EGMIRLASNQTVARMLERDDFKKRYGENRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +     +P + +    +I D  + S+ + L+  PM EI +        K   +
Sbjct: 230 SAHNYIGIA---DAPSDMFGKIMSISDDLMWSYFELLSFRPMDEIAQFKADVDAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H  E AE A    +  F        MP       E   G+ +  L+ 
Sbjct: 287 VKFLLAREIIARFHSEEAAEAALQEFISRFQKGNLPDEMPEF-----EFEAGLPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +     ST++A R ++  A+K +   + + KL          GN     GK+      +
Sbjct: 342 EVALVNSTSDAMRMIRQGAVKQDGEKVEDTKLVPTA------GNYVFQVGKRKFARVMI 394


>gi|90580612|ref|ZP_01236417.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438270|gb|EAS63456.1| tyrosyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 395

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +   + I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEQALIEI--KRGVEELIPEAELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVTFLIGDFTGMVGDPTGKNATRPPLTREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +   + +  + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 116 -KTTIAFNSTWLSELGA-EGMIRLASNQTVARMLERDDFKKRYGENRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHAQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +     +P + +    +I D  + S+ + L+  PM EI +        K   +
Sbjct: 230 SAHNYIGVA---DAPSDMFGKIMSISDDLMWSYFELLSFRPMDEIAQFKADVDAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H  E AE A    +  F        MP       E    + +  L+ 
Sbjct: 287 VKFLLAKEIIARFHSEEAAEAALQEFISRFQKGNLPDEMPEF-----EFEASLPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST++A R ++  A+K +   + + KL          GN     GK+      +
Sbjct: 342 EAALVNSTSDAMRMIRQGAVKQDGEKVEDTKLVPTA------GNYVFQVGKRKFARVMI 394


>gi|229519851|ref|ZP_04409285.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229343139|gb|EEO08123.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 434

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 145/424 (34%), Positives = 220/424 (51%), Gaps = 19/424 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L           Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFVT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI------- 356
             +T  VHG E    A       F   +    +    +++ E+  G+  +  +       
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSL--SELAQLEL-DGLPCVAALRSDSLLD 369

Query: 357 --VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             + +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   + 
Sbjct: 370 LLLSSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALI 427

Query: 415 HLCG 418
            L G
Sbjct: 428 KLEG 431


>gi|268316596|ref|YP_003290315.1| tyrosyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334130|gb|ACY47927.1| tyrosyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 413

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 102/421 (24%), Positives = 181/421 (42%), Gaps = 24/421 (5%)

Query: 1   MPAFKSDFLSILSE--RGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHL 54
           MP+F       L +  RG +  I     +  L     +   +   +G D +   LH GH 
Sbjct: 1   MPSF-PPVEEQLRQIRRGVVEIIPEEELVQKLERSYRTGKPLIVKLGCDPSRPDLHLGHA 59

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             L  L   Q  GH+ + ++G  T++IGDP+ R ++R  +  +E + N        +  +
Sbjct: 60  VVLRKLRQFQDLGHQAVLIIGDFTAMIGDPTGRSKTRPALTLEETRANGRTYFEQAAKIL 119

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                    ++  N  WL  + + D++  + + ++V RML  +    R K  + +   EF
Sbjct: 120 DP----ERTIIRYNSEWLGRMTFRDVIE-LAAKYTVARMLERDDFEKRYKAGEPIGIHEF 174

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TAS 233
            Y + QA D VE+       +++GG+DQ  N++ G D+ +         L  P+L  T  
Sbjct: 175 LYPLAQAMDSVEIQ----ADVELGGTDQRFNLLVGRDIQQAYGQEPQVCLLMPILEGTDG 230

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   I + +    P   +    +I D  +  + +  T +P  E+    +   +
Sbjct: 231 VEKMSKSLDNYIGITEP---PEEMYGKVLSIPDHLIYRYFELATDIPTEELPAKKEFAER 287

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           +   AK  +A  I  M HG E A +A              + +     + DE +R + L+
Sbjct: 288 DPRNAKHELAWTIVRMYHGEEAANRAREHFERTIIRGEAPEDLEPFRPTPDEGTR-IALV 346

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            LIV+A  A+S +EARR ++  A+ I+   +++E L+I   D        L  GK+    
Sbjct: 347 NLIVQAELASSKSEARRLIRQGAVSIDGERVTDEHLEI---DLAQRAPFVLKVGKRRFAR 403

Query: 414 C 414
            
Sbjct: 404 V 404


>gi|152979484|ref|YP_001345113.1| tyrosyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150841207|gb|ABR75178.1| tyrosyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 395

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 103/419 (24%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDLNT-VLAELK-RGVDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQNFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIFKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R   +Q ++  EF Y +LQ
Sbjct: 116 -KTRIVFNSEWLGQLGT-EGMIRLTSNYTVARMLERDDFKKRFTNQQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I +     +P   +    +I D  +  +   L+  P+SEI+++       K   +
Sbjct: 230 SLGNYIGVT---DAPNEMFGKVMSISDDLMWDWYNLLSFRPLSEINQLKADVQAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H +  AE A    +  F        MP  +         +GL TL+ 
Sbjct: 287 VKILLAKELIARFHDQAAAEAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG  TST+EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 342 EAGLVTSTSEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARITV 394


>gi|253701885|ref|YP_003023074.1| tyrosyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776735|gb|ACT19316.1| tyrosyl-tRNA synthetase [Geobacter sp. M21]
          Length = 403

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 100/415 (24%), Positives = 177/415 (42%), Gaps = 27/415 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  +     ++ L     +   +    G+D TA  LH GH   L  +   QK 
Sbjct: 8   EIIKRGAVEILVEKELVEKLEKSVKTGVPLKIKAGFDPTAPDLHLGHTVLLHKMRQFQKL 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +          ++
Sbjct: 68  GHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPKL----TKVV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +     +  + S ++V RML  E   +R   +  +S  EF Y ++Q YD V 
Sbjct: 124 FNSEWLGKLSA-SDMIGLASKYTVARMLEREDFSNRFSNQLPISIHEFMYPLVQGYDSVA 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L           +T PLL       KM K+L   I
Sbjct: 183 LK----ADVELGGTDQKFNLLVGRELQREWGQAPQCVITMPLLEGLDGVNKMSKSLGNYI 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKII 302
            +N+     Y       +I D  +V + + L+ L + E +++            EAKK +
Sbjct: 239 GINEPADEIY---GKIMSISDELMVRYYELLSDLTIVEFEKLKADLKSGAIHPMEAKKQL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+    HG E A  A    ++ F  +     MP   +  +     + L  ++ +A   
Sbjct: 296 AREMVGRYHGAEAATIADENFVKRFKNNETPDDMPEFILKAE--GERVLLCKVLAEAQLT 353

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            S +E RR ++   +KIN   +++E L+I        G   +  GK+        
Sbjct: 354 KSNSEGRRSIQGGGVKINGEKVADENLEIACV-----GEYVIQVGKRRFAKVRFV 403


>gi|84394556|ref|ZP_00993262.1| tyrosyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|86148140|ref|ZP_01066439.1| tyrosyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218710458|ref|YP_002418079.1| tyrosyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|84374825|gb|EAP91766.1| tyrosyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|85834057|gb|EAQ52216.1| tyrosyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218323477|emb|CAV19654.1| tyrosyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 395

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEDELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDPS ++ +R  +  +++ +N E  K      +      
Sbjct: 59  RAFQELGHEVTFLIGDFTAMVGDPSGKNSTRPPLSREDVLKNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTQIRFNSEWLSELGA-EGMIRLASNQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GHDSVAL----ESDVELGGTDQKFNLLMGRELQKAAGQKPQAVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+  +       K   +
Sbjct: 230 SAHNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAELKAGVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +AE A    +  F  +     MP       E   G+ +  ++ 
Sbjct: 287 VKVLLAKEIIARFHSEADAEAAEQEFVNRFAKNQVPDEMPEF-----EFEAGLPIANVLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A K+    I + K   +       G      GK+      +
Sbjct: 342 EAGLVNSTSDAMRMIKQGAAKLEGEKIEDSKFVPEA------GTAVYQVGKRKFARITI 394


>gi|327483318|gb|AEA77725.1| Tyrosyl-tRNA synthetase cluster 1 [Vibrio cholerae LMA3894-4]
          Length = 426

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 216/432 (50%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESRKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSL--SELAQLEL-DGLPCV--------AA 353

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E   +            L  
Sbjct: 354 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQR 411

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 412 GKKQFALIKLEG 423


>gi|229530307|ref|ZP_04419695.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332080|gb|EEN97568.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 434

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 216/432 (50%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESRKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSL--SELAQLEL-DGLPCV--------AA 361

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E   +            L  
Sbjct: 362 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQR 419

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 420 GKKQFALIKLEG 431


>gi|197117360|ref|YP_002137787.1| tyrosyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086720|gb|ACH37991.1| tyrosyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 403

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 100/413 (24%), Positives = 180/413 (43%), Gaps = 27/413 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  +     ++ L     +   +    G+D TA  LH GH   L  +   QK 
Sbjct: 8   EIIKRGAVEILVEKELVEKLEKSVKTGVPLKIKAGFDPTAPDLHLGHTVLLHKMRQFQKL 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +          ++
Sbjct: 68  GHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPKL----TKVV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +     +  + S ++V RML  E   +R   +  +S  EF Y ++Q YD V 
Sbjct: 124 FNSEWLGKLSA-SDMIGLASKYTVARMLEREDFSNRFSNQLPISIHEFMYPLVQGYDSVA 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L           +T PLL       KM K+L   I
Sbjct: 183 LK----ADVELGGTDQKFNLLVGRELQREWGQAPQCVITMPLLEGLDGVNKMSKSLGNYI 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKII 302
            +N+     Y       +I D  ++ + + L+ L + E +++    K       EAKK +
Sbjct: 239 GINEPADEIY---GKIMSISDELMIRYYELLSDLTIVEFEKLKSDLKDGAIHPMEAKKQL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+    HG E A  A    ++ F  +   + MP  ++  +     + L  ++ +A   
Sbjct: 296 AREMVGRYHGVEAATLADENFVKRFKNNETPEDMPEFTLKAE--GEKVLLCKVLAEAQLT 353

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S +E RR ++   +K+N   +S+E L+I        G   +  GK+      
Sbjct: 354 KSNSEGRRSIQGGGVKVNGDKVSDENLEIACV-----GEYVIQVGKRRFAKVR 401


>gi|297171169|gb|ADI22179.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0200_24F15]
          Length = 401

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 176/413 (42%), Gaps = 23/413 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG    I     ++ L     +   +G+D TA  LH GH   +  +   Q  
Sbjct: 8   DLMVELR-RGVEEIIPEEDLIERLKIGRPLRVKVGFDPTAPDLHLGHTVIVNKMRQFQDL 66

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T +IGDPS +  +R  +   EI++N E  +      +          + 
Sbjct: 67  GHEIIFLIGDFTGMIGDPSGKSVTRPPLSRDEIEKNAETYREQVFKILDRQM----TRIE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +   + +  +   +++ R++  +   +R +  + +   E  Y ++Q YD V 
Sbjct: 123 FNSRWGNELGA-EGIIRLAGRYTMARIMERDDFSTRYESGEPIGIHELLYPLMQGYDSVA 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L    +  +++GG+DQ  N++ G +L ++         T PLL       KM K+L   +
Sbjct: 182 L----EADVELGGTDQKFNLLVGRELQKQYSQTPQVVFTLPLLEGLDGVQKMSKSLGNYV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  +   L+   ++E+D  R+    G    + K ++A
Sbjct: 238 GITEP---PDEMFGKLMSISDELMWRYFDLLSFRTLAELDQLRIEVQHGANPRDIKFMLA 294

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H   EA++A    +E F       ++    IS  +  + + + T+I +AG   
Sbjct: 295 EEIVRRFHSLREAKRAKEEFVERFQKGAMPANIEMKIISSKD--KEVPIATVIKEAGLVK 352

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST+EA R L   A++IN   +++   +I L D           GK+      +
Sbjct: 353 STSEALRMLDQGAVRINGERVTDRDRKIGLGDAG-----VFQVGKRRFARVQI 400


>gi|195120199|ref|XP_002004616.1| GI19509 [Drosophila mojavensis]
 gi|193909684|gb|EDW08551.1| GI19509 [Drosophila mojavensis]
          Length = 464

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 135/445 (30%), Positives = 220/445 (49%), Gaps = 32/445 (7%)

Query: 3   AFKSDF----LSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
            FK +F    L  LS+RGF   I   +    +  L ++   + Y G+D TA SLH G+L 
Sbjct: 18  NFKRNFTHKNLLELSDRGFFQSIFPDTAAPRIKQLFTKSSQSIYAGFDPTADSLHVGNLL 77

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +M L   Q+ GHKPI+L+GG T +IGDPS R   R  +    I+ N++ I+G      K
Sbjct: 78  VIMGLLHCQRAGHKPIALVGGATGLIGDPSGRKTERNQLGQSVIETNLQAIEGQLRRVFK 137

Query: 116 ------YGTGKTDAL-----MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
                 + T    +      ++NN  W  ++  ID +  +G  F +  MLS  SV++RL+
Sbjct: 138 NHEDCLWDTRNNKSQLAPLTIVNNAEWYANLNLIDFIANMGRHFRMGSMLSRSSVQTRLE 197

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFA 223
            E  +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R  +  ++F 
Sbjct: 198 SEDGMSFTEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQMGNLMTGHELISRVERNREVFG 257

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           LT P++T   G K GK+   A+WL++  TSP+  +Q++  + D++V    K  T +P++E
Sbjct: 258 LTLPIVTNEEGDKFGKSAGNAVWLDESKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLAE 317

Query: 284 IDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----------I 331
           +D++ +      E  +A+ ++A ++T +VHG    ++A       +  +           
Sbjct: 318 VDQLMREHAKEPEKRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELNYEE 377

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             Q     ++       GM +L L +KA    + ++A R + +    IN   + N    I
Sbjct: 378 IKQTFQGATVVDLLTEPGMSILQLAMKAKCFPTESDAVRIISAGGFYINQKRVQNIAEVI 437

Query: 392 KLQ-DFDSTGNIKLSFGKKNHIICH 415
                    G   L  GK+N  I  
Sbjct: 438 TTGIHILRNGVSLLRVGKRNFYIVR 462


>gi|289207590|ref|YP_003459656.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943221|gb|ADC70920.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 401

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 96/404 (23%), Positives = 171/404 (42%), Gaps = 23/404 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +      + L     +    G+D TA  LH GH   +  L  LQ  GH  I L+
Sbjct: 12  RGADEILLEEDLRERLKEGRPLRIKAGFDPTAPDLHLGHTVLINKLRQLQDLGHHIIFLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T  IGDPS ++ +R  + S++I+ N    +      +          +  N TW+  
Sbjct: 72  GDFTGRIGDPSGKNATRPPLSSEDIERNAATYRDQVFRILDPD----RTEVAFNSTWMEP 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +     + ++ S  +V RML  +    R +  Q ++  EF Y ++Q YD V L       
Sbjct: 128 LGA-AGMVQLASRHTVARMLERDDFHKRYRDHQPIAIHEFLYPLIQGYDSVALK----AD 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L ++   P    LT P+L       KM K+L   I +     +
Sbjct: 183 VELGGTDQKFNLLVGRELQKQEGMPPQVILTMPILEGLDGVQKMSKSLGNYIAVQ---DA 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKEINEAKKIIATEITTMV 310
           P + +    +I D  +  + + L+  PM       R A+   +   + K  +  E+    
Sbjct: 240 PDDMFGKLMSISDELMWRYYELLSLRPMGEVRAARRAAEAGERNPRDIKFELGRELVDRF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG    E+A  A +E F      + +P ++++    + G+ L   +  AG   ST+E R 
Sbjct: 300 HGPGRGEQAQAAFVERFQKHALPEELPEVTVAVP--AEGLLLPNALKSAGLVASTSEGRS 357

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++  A+++N   I +    I+         + +  GK+     
Sbjct: 358 MIRQGAVRLNGERIEDPGTLIEP-----GEPVVIQVGKRRVARV 396


>gi|315125691|ref|YP_004067694.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas sp. SM9913]
 gi|315014205|gb|ADT67543.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas sp. SM9913]
          Length = 399

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 181/413 (43%), Gaps = 24/413 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     ++ L S   +    G+D TA  LH GH   +  +   Q  GH
Sbjct: 7   LAEIK-RGAEEILIEDELVEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKMKTFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T +IGDP+ ++ +R+ +   ++  N E  K      +          +  N
Sbjct: 66  EVIFLIGDFTGMIGDPTGKNVTRKPLTRDDVLANAETYKEQVFKILDPA----KTTVAFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TW+  +     + ++ +  +V RML  +  + R    QS++  EF Y ++Q +D V L 
Sbjct: 122 STWMEKLGA-AGMIKLAARQTVARMLERDDFKKRYAGGQSIAIHEFLYPLVQGWDSVAL- 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +         L  PLL  T    KM K+L   I +
Sbjct: 180 ---ESDVELGGTDQRFNLLMGRELQKDEGQKPQTVLMMPLLEGTDGVQKMSKSLGNYIGI 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L++L + +I    +   QG    + K  +A E
Sbjct: 237 T---DTPSDMFGKIMSISDVLMWRYYDLLSSLSIEQIAAQKQRVEQGTNPRDIKIELAKE 293

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H   +A+ A    ++ F        +P ++++ DE    + +  L+ +AG   ST
Sbjct: 294 LIARFHSEADAQAAHDDFIQRFQKKALPDEIPELTVNIDE--ESILIANLLKEAGLVAST 351

Query: 366 NEARRHLKSNAIKINNS-IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R +K  A+K+N    I++ KL+I               GK+      + 
Sbjct: 352 SEAMRMIKQGAVKLNGEDKITDTKLEI-----VKGTTAIYQVGKRKFANITVA 399


>gi|302389946|ref|YP_003825767.1| tyrosyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200574|gb|ADL08144.1| tyrosyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 400

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 183/414 (44%), Gaps = 31/414 (7%)

Query: 9   LSILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L IL +   +  I     L+ L     ++  +   +G D TA  +H GH   L  +   Q
Sbjct: 7   LEILKQ-NAVEIIFEEELLNKLKRSYETKKPLRVKLGLDPTAPDVHLGHAVVLKKMRQFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I L+G  T +IGDP+ + E+R+ +  +EI EN    K      +  G       
Sbjct: 66  DLGHEVILLIGDFTGMIGDPTGKSETRKQLSREEIMENARTYKEQVFKILDPG----KTR 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  WL  + + + + ++ S ++V RML  E    R K  + +S  EF Y ++Q YD 
Sbjct: 122 IAFNSEWLGRMSF-EDVLKLASKYTVARMLEREDFSQRFKEGRPISIHEFFYPLMQGYDS 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSG 243
           V L    +  +++G ++Q  NI+ G  L +        A+  P+L       KM K+L  
Sbjct: 181 VAL----EADVELGATEQKFNILMGRTLQKEYGQEPQVAMLMPILVGIDGKRKMSKSLGN 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKK 300
            I +++    P   +    +I D  ++ + +  T +   EID++    K       +AK 
Sbjct: 237 YIGVSEP---PDEMYGKVMSIPDEVMMEYYRLATYVDPEEIDKIEKGIKEGNINPRDAKM 293

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI  + HG EEA +A    +  F        +P   I + +V     L  L+  +G
Sbjct: 294 RLAREIVKIYHGDEEALRAEENFVRVFQKKDLPDEIPEFKIDEGKV----WLPKLMTLSG 349

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +S +EA R +K  A+KIN   IS+        D + +  + L  GK+  +  
Sbjct: 350 LCSSNSEALRMIKQGAVKINGEKISD------AMDLEISSPVVLQVGKRKFVRV 397


>gi|71278248|ref|YP_271371.1| tyrosyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|115305802|sp|Q47V01|SYY_COLP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71143988|gb|AAZ24461.1| tyrosyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 399

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 179/420 (42%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F   F + L  RG    +     L  L +   +    G+D TA  LH GH   +  L
Sbjct: 1   MTDFNQAF-AELK-RGAEEILVEEELLTKLKTGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKALTKEDVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TW+  +     + ++ S  +V RM+  +  + R    Q+++  EF Y ++Q
Sbjct: 116 -KTTVAFNSTWMDKLGA-AGMLQLASRQTVARMMERDDFKKRYANGQAIAIHEFMYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQRPQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I +     +P + +    +I D  +  + + L+  P+ EI+  +     GK   +
Sbjct: 230 SLGNYIGIT---DTPTDMFGKIMSISDVLMWRYYELLSFKPLEEIEGYKTEIENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H    A+ A    +  F        MP ++I+ +  +  + +  L+ 
Sbjct: 287 VKIDLAKELIARFHDEAAAQAAHDEFINRFQKGALPDDMPELTITTE--NGEIAIANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   ST++A R +K  A KI++  +++  L I               GK+      + 
Sbjct: 345 DAGLVGSTSDAFRMIKQGAAKIDSEKVTDRSLVISA-----GTTAVYQVGKRKFARITVS 399


>gi|27904618|ref|NP_777744.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|34098363|sp|Q89AW3|SYY_BUCBP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27904015|gb|AAO26849.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 424

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 157/415 (37%), Positives = 227/415 (54%), Gaps = 8/415 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +    +R  I QI+N  +L  +     ++ Y G+D+TA SLH GH+  L+ L   Q  G
Sbjct: 6   LIQEFQDRNLISQITNEIDLKNILLHNKISLYCGFDITADSLHVGHILPLLCLRRFQNLG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ LMGGGTS+IGDPSF+   R++   + +    +KI    S F+K+  GK +AL+++
Sbjct: 66  HRPVILMGGGTSLIGDPSFKLLERQLNSIELVHTWKQKITKQLSLFLKFNVGKNNALIVD 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  +I  +  LR+IG  FS+N+M+  ++++ R+KR +Q +SF EF+Y +LQAYDF  
Sbjct: 126 NYEWFKNINVLTFLRDIGKHFSINQMIVRDAIQRRIKRLDQGISFTEFSYNLLQAYDFYF 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K  D  LQ+GGSDQWGNII GIDL  RL   + + +T PLLT   G K GKT    IW
Sbjct: 186 LNKQLDVILQIGGSDQWGNIISGIDLIRRLHKKRAYGITVPLLTKKDGRKFGKTELDTIW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-NEAKKIIATE 305
           L+K  TSPY F+QYW NI D+D+ SF K  T L +SEI  +         N  KKI+A  
Sbjct: 246 LDKMKTSPYKFYQYWMNISDSDIYSFLKMFTFLSLSEIKALKDTTKPTELNSVKKILAEY 305

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLIVKA 359
           +T +VHG  E           F              +    +   ++     L  L+V +
Sbjct: 306 LTNLVHGSNEVRAIQRITSSLFSGKFSEMKETDFFQLEQDGMPSVQLYNSGNLQQLLVYS 365

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A S + A+  + SN+++INN I +N    +  +D        LS GKKN  + 
Sbjct: 366 RLALSRSHAKSMIVSNSVRINNIIQNNPFYILCNRDKMYHKYTLLSRGKKNFCLL 420


>gi|157364571|ref|YP_001471338.1| tyrosyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157315175|gb|ABV34274.1| tyrosyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 397

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 112/414 (27%), Positives = 190/414 (45%), Gaps = 28/414 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL +   +  +S    L+ L  +  +   +G D T   LH GH   L  L   Q  GH
Sbjct: 7   LEILKK-NAVDLVSEEDLLNKLTRKKQLRVKLGVDPTRPDLHLGHAVVLFKLRQFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K I ++G  T+ IGDPS RD +R+M+   E+++N +  +      +     K    +  N
Sbjct: 66  KVILIIGDFTAQIGDPSGRDVTRQMLSESEVRQNAKTYQEQAFRILD----KEKTEVRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + D+++ + S ++V RML  +    R      +S  EF Y + QAYD V + 
Sbjct: 122 SEWLSKMSFADVIK-LASKYTVARMLERDDFSKRYSSNLPISISEFLYPLAQAYDSVAVQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG+DQ+ N++ G  + E +       LT P++  T    KM K+    I  
Sbjct: 181 ----ADVELGGTDQYFNLLVGRKIQEEMGQEPQVVLTMPIIEGTDGKMKMSKSYENYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIAT 304
           N    +P++ +    +I D  ++ + + LT +P   ++E + + + +     + K  +A 
Sbjct: 237 N---DTPFDMYGKLMSIPDELIIKYIRLLTQIPEQKINEYESLIQSKSVNPRDIKMKLAF 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            IT+  HG E A KA    ++ F        MP I +   EV     L+ L+V    A+S
Sbjct: 294 AITSFFHGEEGAAKAENEFIKIFRQKELPTQMPAIELDNSEVE----LVELLVTLQIASS 349

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +EARR +   A+KI++  I++   +I            L  GK+N     L G
Sbjct: 350 RSEARRLISQGAVKIDDEKITDIHAKI-----FVDREKVLRVGKRNFF--RLVG 396


>gi|253995573|ref|YP_003047637.1| tyrosyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982252|gb|ACT47110.1| tyrosyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 399

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 179/419 (42%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    S  L+++  RG    +     ++ L     +    G+D TA  LH GH   +  L
Sbjct: 1   MNIEISQQLAVIK-RGADELLIEAELVEKLKKGQPLKIKAGFDPTAPDLHLGHTVLINKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHK + L+G  T +IGDP+ +  +R  + ++++QEN +         +K     
Sbjct: 60  RQFQELGHKVLFLIGDFTGMIGDPTGKSTTRPPLTAEQVQENAKTYTAQVFKILKP---- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    +L+   S  +V RML  +    R K  Q ++  EF Y +LQ
Sbjct: 116 EQTEVVFNSKWLNELGAAGMLKLAASH-TVARMLERDDFSKRFKGNQPIAIHEFLYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L ++        LT PLL       KM K
Sbjct: 175 GYDSVAL----NADVELGGTDQKFNLLMGRELQKQAGQSPQCVLTMPLLEGLDGVNKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +L   I + +    P   +    +I D  +  + + L+   +  I +            +
Sbjct: 231 SLGNYIGIAEA---PEIIFAKIMSISDELMWRYVELLSFESLETIAQWKADVANGSNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K   A EI    H + +AEKA                +P ++++ D  +  +G+  L+ 
Sbjct: 288 IKVRFAQEIVARFHSQADAEKALADFQT-RSKGGIPDDVPEVAVTID--AEQVGVAQLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R ++   +K++   ++++ L +         ++    GK+      +
Sbjct: 345 LAGLVASTSEAFRAIEQGGVKLDGEKVTDKGLMLSKA-----SSVVAQVGKRKFANVTI 398


>gi|322418401|ref|YP_004197624.1| tyrosyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124788|gb|ADW12348.1| tyrosyl-tRNA synthetase [Geobacter sp. M18]
          Length = 403

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 179/413 (43%), Gaps = 27/413 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  +     ++ L     +   +    G+D TA  LH GH   L  +   QK 
Sbjct: 8   EIIKRGAVEILVEKELVEKLEKSVKTGVPLKIKAGFDPTAPDLHLGHTVLLHKMRQFQKL 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +          ++
Sbjct: 68  GHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPKL----TKVV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +     +  + S ++V RML  E   +R   +  +S  EF Y ++Q YD V 
Sbjct: 124 FNSEWLGKLSA-SDMIGLASKYTVARMLEREDFSNRFANQLPISIHEFMYPLVQGYDSVA 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L           +T PLL       KM K+L   I
Sbjct: 183 LK----ADVELGGTDQKFNLLVGRELQREWGQAPQCVITMPLLEGLDGVNKMSKSLGNYI 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            +N+     Y       +I D  +V + + L+ L M+E +++            EAKK +
Sbjct: 239 GINEPADEIY---GKVMSISDQLMVRYYELLSDLTMAEFEQLKADLKGGALHPMEAKKQL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+    HG E A  A    ++ F  +     MP  ++  +     + L  ++ +A   
Sbjct: 296 AREMVARYHGAEAAALAGENFVKRFKNNETPDEMPEFTLKPE--GEKVLLCKVLAEAQLT 353

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S +E RR ++   +K+N   +S+E L+I        G   +  GK+      
Sbjct: 354 KSNSEGRRSIQGGGVKVNGDKVSDENLEIACA-----GEYIIQVGKRRFAKVR 401


>gi|312194516|ref|YP_004014577.1| tyrosyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225852|gb|ADP78707.1| tyrosyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 429

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 130/421 (30%), Positives = 209/421 (49%), Gaps = 15/421 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             S  L  LS RG IH  ++  EL          AYIG+D TA  L  GH+  + LL   
Sbjct: 1   MTSALLDELSWRGLIHDSTDAAELRNHLDSAARRAYIGFDPTAPGLTIGHMLPITLLIRA 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
            + G +P++L GGGT +IGDPS +   R+++  Q++  N+ + + +  +           
Sbjct: 61  ARAGIRPVALFGGGTGLIGDPSGKSVERQLLSPQDVAANVSRHQELMRTIFARALPADQM 120

Query: 124 L-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQA 181
              ++N  WL  +  I+ LR++G  F +  M   +SVR RL+     LS+ EF+YM+LQA
Sbjct: 121 PIFVDNSAWLGGLGLIEFLRDVGKHFPIGEMTKRDSVRRRLEDPDVGLSYTEFSYMLLQA 180

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF  L +++   +QMG SDQWGNI+ GID   R+   +   LT PLL  + GTK GK+ 
Sbjct: 181 YDFRRLCEDHGVTVQMGASDQWGNIVAGIDYIRRVLRTQAHGLTCPLLLRSDGTKFGKSE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
            GA+W++ + TSPY F+Q+  N  D +   FA   +      ++++             +
Sbjct: 241 KGAVWISADGTSPYTFYQFVINQSDENARQFALFFSLADRESLEKLFAQHAETPSRRALQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS-R 348
           + +A E+TT+VHG E  + A  A+   F                  +P+I   +  +   
Sbjct: 301 RYLAREMTTLVHGEEATDAAEAASEALFKGDVRAISPQLFGDVFTDVPSIEEPRSRLDGD 360

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  ++ L++  G A+S   AR HL + AI IN   +S+   ++   D      + +  G+
Sbjct: 361 GWPVVDLLIAVGLASSKKVAREHLGNGAISINGDKVSDLDARVTAADLLHGSVLLVRRGR 420

Query: 409 K 409
           +
Sbjct: 421 R 421


>gi|217969658|ref|YP_002354892.1| tyrosyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506985|gb|ACK53996.1| tyrosyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 399

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 86/420 (20%), Positives = 172/420 (40%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++     L +RG    +     ++ L     +    G+D TA  LH GH   +  +
Sbjct: 1   MSDVQAAI--DLIKRGADAVLIEAELVEKLKRGKPLRVKAGFDPTAPDLHLGHTVLINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T +IGDPS ++ +R  +  ++I EN    +      +      
Sbjct: 59  RHFQELGHQVQFLIGDFTGMIGDPSGKNSTRPPLSREQILENARTYQEQVFKILDP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+  +     +  + +  +V RML  +    R    Q ++  EF Y + Q
Sbjct: 115 EKTEICFNSAWMNDLGA-AGMIRLAAQQTVARMLERDDFAKRYGNNQPIAIHEFLYPLCQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +       +++GG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 174 GYDSVAMK----ADVELGGTDQRFNLLMGRELQKHYGQEPQCVVMVPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I + +        +    ++ D  +  + + L+    +EI ++       +   +
Sbjct: 230 SLGNYIGIAEP---AKEIFGKTMSVSDTLMWRYYELLSFRSSAEIAQLRADVEGGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E     HG+  AE+A       F  +     +P ++++    + G+ L  ++ 
Sbjct: 287 VKVMLAMEFVARFHGQRAAEEALADFEARFQRNAIPDDIPQVNVNVG--AGGLPLFQVLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   +T+EA R ++   ++I+     ++ L ++         + L  GK+      L 
Sbjct: 345 QAGLTGTTSEAMRMVEQGGVRIDGERAEDKGLLLRA-----GETVVLQVGKRKFASVVLS 399


>gi|308050795|ref|YP_003914361.1| tyrosyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307632985|gb|ADN77287.1| tyrosyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 395

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 170/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M         I   RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDLDKALAEIC--RGTDEILVEEELVAKLKLGRPLRVKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQELGHEVIFLIGDFTGMVGDPSGKNTTRPPLTREQVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +   + +  + S  +V RML  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIEFNSSWLGELGA-EGMLRLASQQTVARMLERDDFKKRFGGGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         +T PLL       KM K
Sbjct: 174 GHDSVAL----EADVELGGTDQKFNLLMGRELQKDAGQSPQVVITMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I ++    +P   +    +I D  + ++ + L+  P+ EI ++           +
Sbjct: 230 SANNYIGVS---DAPSEMFGKIMSISDDLMWNYYELLSFRPLEEIAQLKADIEAGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    +  F  +     MP       E   G+ +  L+ 
Sbjct: 287 VKIALAKEIIARFHDEAAAEAAHQDFINRFSKNAIPDEMPEF-----EFEAGIAIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   +T++A R +K    KI+   I + KL          G      GK+      L
Sbjct: 342 EAGLVNTTSDAMRMIKQGGAKIDGDKIEDSKLVPAA------GTAVYQVGKRKFARITL 394


>gi|165924084|ref|ZP_02219916.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165916461|gb|EDR35065.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 399

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 185/414 (44%), Gaps = 23/414 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIREDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +          + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTREIVMENTKTYETQAFRILDPD----KTQVT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  D L  + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKA-DDLVRLAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LK----ADVELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R      +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWCYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +T+E  R +   A++I+   + + KL I         +     GK+      + 
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIPR-----GESHLFQVGKRRFAKVKVI 399


>gi|219871769|ref|YP_002476144.1| tyrosyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691973|gb|ACL33196.1| tyrosyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 396

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 175/419 (41%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG     S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQSIETILAELK-RGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 60  RQFQNFGHEVIFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYKEQIYKILDPQ--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  + ++  + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 117 -KTRIVFNSDWLGELGTVGMI-RLASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 175 GHDSVAL----EADIELGGTDQTFNLLIGRELQKAAGQKLQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I + +    P   +    +I D  +  +   L+  P++EI ++       K   +
Sbjct: 231 SLGNYIGVTEV---PNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL TL+ 
Sbjct: 288 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVDDVKQN------AQKGTFVYQVGKRKFARVTV 395


>gi|323702081|ref|ZP_08113749.1| tyrosyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532963|gb|EGB22834.1| tyrosyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 408

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/415 (24%), Positives = 184/415 (44%), Gaps = 26/415 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG    +     ++ L     +   +   +G D TA  +H GH   L  L   Q+ 
Sbjct: 9   EIIKRGTAEIVPEEELVEKLKKSVANNKPLHIKLGLDPTAPDIHLGHTVVLQKLRQFQEL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK   ++G  T  IGDP+ + E+R+ +  +++  N +  +      +          + 
Sbjct: 69  GHKVTIILGDYTGRIGDPTGKSETRKQLTEEQVLANAKTYEQQIFKILDPQ----KTSVR 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N TWL  +K+ + +  + +  +V RML  E    R K    +S  EF Y ++Q YD V 
Sbjct: 125 FNSTWLAPLKF-EDVIRLAATTTVARMLEREDFSKRFKENLPISIHEFFYPLMQGYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L    +  +++GG+DQ  N++ G  L +        AL  P+L       KM K+L   I
Sbjct: 184 L----EADIELGGTDQKFNLLMGRTLQKEFGQEPQIALMMPILEGLDGVNKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKII 302
            +++    P   +    ++ D  +V + + +T +P+ E+  +AK          + K  +
Sbjct: 240 GIDEP---PQEMYGKTMSLPDELMVRYFELVTPVPLEEVRSIAKGLAEGTLHPRDVKMRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL-TLIVKAGF 361
           A EI +  HG E A +A     + F        +    +++D    G+ +L  L+ +A  
Sbjct: 297 AREIVSFYHGPEAAMQAEEQFKKVFQKKELPDEIDQFVVTEDLYEDGLVILPRLMTQAKL 356

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A+ST+EARR +K  A+KI+   +++  L+    D      + +  GK+      L
Sbjct: 357 ASSTSEARRLIKEGAVKIDGEKVTDPNLRFAPTD-----GMVIRAGKRRFARLSL 406


>gi|291614904|ref|YP_003525061.1| tyrosyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291585016|gb|ADE12674.1| tyrosyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 398

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 178/419 (42%), Gaps = 25/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   + + L+ +  RG    +        L     +    G+D TA  LH GH   L  +
Sbjct: 1   MS--QQEILNQIK-RGSDELLLESELDKKLAEGRPLRIKAGFDPTAPDLHLGHTVLLNKM 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH  + L+G  T +IGDP+ ++ +R  +  +++  N +  K      +      
Sbjct: 58  RQLQDLGHHALFLIGDFTGMIGDPTGKNATRPPLSREQVLANAQSYKDQVFKVLDP---- 113

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W+     +DL++   +  +V +ML  +    R K  Q ++  EF Y ++Q
Sbjct: 114 NKTEVVFNSAWMDKFSAVDLIKLAATH-TVAQMLERDDFGKRYKASQPIAIHEFIYPLVQ 172

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       L++GG+DQ  N++ G +L      P    LT PLL       KM K
Sbjct: 173 GYDSVALK----ADLELGGTDQKFNLLMGRELQRHFGQPAQCVLTMPLLEGLDGVNKMSK 228

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +L   + +     +P + +    +I D  +  + + L+   +++I         G+   +
Sbjct: 229 SLGNYVGIT---DTPQDMFGKLMSISDDLMWRYLELLSFRSLAQIAHWRDEVNGGRNPRD 285

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H ++ AE A       F   +    MP +++    V   + +  L+ 
Sbjct: 286 IKVLLAQEIVARFHSQKAAEDALAEFEARFQKGVLPDDMPELTVQS--VDGSIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R +    +K++   +S++ LQ+K         +    GK+     ++
Sbjct: 344 QANLVASTSEALRMIDQGGVKLDGEKVSDKSLQLKA-----GAVVVAQVGKRKFGRINV 397


>gi|24372893|ref|NP_716935.1| tyrosyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81462720|sp|Q8EHB3|SYY_SHEON RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24347014|gb|AAN54380.1|AE015575_6 tyrosyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 398

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/418 (22%), Positives = 175/418 (41%), Gaps = 25/418 (5%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIRRGTDEILLESDLLEKLKKGRPLRIKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALK----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++  +         + K
Sbjct: 232 HNYIGVSEPANEMF---GKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGANPRDTK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI    H    AE A  A ++ F        +P + ++  E   G+ +  L+  A
Sbjct: 289 ISLAKEIIARFHDAAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIANLLKDA 345

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               ST++A R +K  A+K++   I + ++ +               GK+      L 
Sbjct: 346 DLVGSTSDALRMIKQGAVKMDGEKIDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 398


>gi|261749629|ref|YP_003257315.1| putative tyrosyl-tRNA synthetase 1 [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497722|gb|ACX84172.1| putative tyrosyl-tRNA synthetase 1 [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 427

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 138/432 (31%), Positives = 217/432 (50%), Gaps = 26/432 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + +  LS RG I        ++    +   T YIG+D T+ SLH G L  +++L   Q
Sbjct: 1   MKNIIDELSWRGLIQNKVP--GVEKQL-KKRTTIYIGFDPTSDSLHLGSLLPIIILIHFQ 57

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GHK I L+GG T +IGDPS + + R     + +Q+N E IK      + +        
Sbjct: 58  KLGHKSIVLIGGATGLIGDPSEKKDQRIFFSLETLQKNAESIKKQLYKLLNFY--SEKTE 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQAY 182
           +LNN +W+  I  +D LR +G  F +N M+S +SV+ R    +   +SF EF+Y ++Q Y
Sbjct: 116 LLNNFSWIKKISLLDFLRNVGKHFPINYMMSKDSVKKRIDNNKNNGMSFTEFSYSLIQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L K  +C LQ+GGSDQWGNI  GI+L  +    K + +T PL+T + G K GK+  
Sbjct: 176 DFLYLNKEKNCLLQIGGSDQWGNITTGIELIRKKTGKKAYGITFPLVTKSDGIKFGKSEK 235

Query: 243 -GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
              IWL+++ T+PY F+Q+W N+ D ++  F K  T     +I+ +     K       +
Sbjct: 236 GENIWLDRKRTTPYKFYQFWMNVSDKEIEKFIKIYTFFSKEKIESLILKHRKNPEKRFLQ 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS---------------IHSQHMPTISISKD 344
           K +A EIT  VHG+   E+    +   F                     +++P + +   
Sbjct: 296 KRVAEEITQWVHGKMAYEEVVKISHVLFGKKYINELLLSLDEKILFSIYENIPHMKLPYK 355

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           E  +G+ LL ++ K+    S +EA R L  N+I IN  +I  + + +  ++      I  
Sbjct: 356 EFEKGVFLLDVLKKSSLFASKSEANRALNLNSISINKKLIK-KNILLHKENLIGKKYILF 414

Query: 405 SFGKKNHIICHL 416
            FGKKN  I  +
Sbjct: 415 QFGKKNFFITKV 426


>gi|42561212|ref|NP_975663.1| tyrosine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400501|sp|Q6MST3|SYY_MYCMS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|42492710|emb|CAE77305.1| tyrosine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321009|gb|ADK69652.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 414

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 218/422 (51%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K+  L  L  RG I QI+N  ++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNSILEELKWRGLIKQITNESKILDAQNNND-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQIIP------NV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL +I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSNISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID          K   LT  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGLTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAK 299
           SG IWL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    +   +  +
Sbjct: 232 SGTIWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQSSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-----MPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA       F   + S       M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTNDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + + 
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LI 413


>gi|229525156|ref|ZP_04414561.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338737|gb|EEO03754.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 430

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 146/441 (33%), Positives = 217/441 (49%), Gaps = 37/441 (8%)

Query: 1   MPAFKSD--FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M    +       L +RG I Q +    L    +      Y G+D TA SLH GHL  L+
Sbjct: 1   MGGRMNSQQLFDDLQQRGLIAQSTPLEALVERFAM-PQVLYCGFDPTAGSLHIGHLVPLL 59

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           LL   Q  GH+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +
Sbjct: 60  LLKRFQNAGHQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQS 119

Query: 119 GKTDA-LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNY 176
               + + +NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y
Sbjct: 120 ENCASLMTVNNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSY 179

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ+YDF  L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK
Sbjct: 180 SLLQSYDFAHLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTK 239

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKE 294
            GKT SGA+WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +       
Sbjct: 240 FGKTESGAVWLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAG 299

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +A++I A  +T  VHG E    A       F   +    +    +++ E+  G+  + 
Sbjct: 300 KPQAQQIFAEHVTRFVHGEEGLAAAQRITQALFSGDVSYLSL--SELAQLEL-DGLPCV- 355

Query: 355 LIVKAGFATS-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                  A S                   +AR  L++ AI++N   +  E   +      
Sbjct: 356 -------AASRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFAL 406

Query: 398 STGNIKLSFGKKNHIICHLCG 418
                 L  GKK   +  L G
Sbjct: 407 FDRYYVLQRGKKQFALIKLEG 427


>gi|238855572|ref|ZP_04645874.1| tyrosine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664764|ref|ZP_05865615.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932742|ref|ZP_06338150.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472673|ref|ZP_07813162.1| tyrosine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831789|gb|EEQ24124.1| tyrosine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529365|gb|EEQ68366.1| tyrosine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561247|gb|EEX27220.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303152|gb|EFA95346.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 420

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 140/423 (33%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N   +            G  + 
Sbjct: 63  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y ILQ  D
Sbjct: 119 QIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQILQGID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L ++Y  ++Q+GGSDQWGNI  GIDL  R        F LT PL+  A GTK GK+ 
Sbjct: 177 FYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNDRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+    E    EA+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEALAEKVKTEPWKREAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  ++    +  I        S +  +    L+
Sbjct: 297 KTLAAEVTKFVHGEAGLKEAQMITDALFSGNVKDLSVKQIEQALKNAPSAESTNEKQNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V     +S  +AR  +++ AI +N   I + + ++          + +  GK+ + +
Sbjct: 357 EFLVDTKIESSKRQAREDIQNGAIYVNGDKIQDLEFEVDPSASFEGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|153207575|ref|ZP_01946258.1| tyrosyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218024|ref|YP_002304811.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|120576543|gb|EAX33167.1| tyrosyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012286|gb|ACJ19666.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 399

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 185/414 (44%), Gaps = 23/414 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +          + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTREIVMENTKTYETQAFRILDPD----KTQVT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  D L  + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKA-DDLVRLAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LK----ADVELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R      +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWCYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +T+E  R +   A++I+   + + KL I         +     GK+      + 
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIPR-----GESHLFQVGKRRFAKVKVI 399


>gi|258625586|ref|ZP_05720472.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582139|gb|EEW07002.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 395

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDELMWSYYELLSFRPLEEIAQFKVDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + +P       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEIPEF-----EFDSGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVASTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTAVYQVGKRKFARVTI 394


>gi|296046591|gb|ADG86437.1| tyrosine tRNA synthetase [Francisella novicida]
          Length = 399

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 180/419 (42%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +F   F + L  RG    +     L  L +   +    G+D TA  LH GH   +  L
Sbjct: 1   MSSFNQAF-AELK-RGAEEILVEEELLTKLKTGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKALTKEDVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TW+  +     + ++ S  +V RM+  +  + R    Q+++  EF Y ++Q
Sbjct: 116 -KTTVAFNSTWMDKLGA-AGMLQLASRQTVARMMERDDFKKRYANGQAIAIHEFMYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQRPQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I +     +P + +    +I D  +  + + L+  P+ EI+  +     GK   +
Sbjct: 230 SLGNYIGIT---DTPTDMFGKIMSISDVLMWRYYELLSFKPLEEIEGYKTEIENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H    A+ A    +  F        MP ++I+ +  +  + +  L+ 
Sbjct: 287 VKIDLAKELIARFHDEAAAQAAHDEFINRFQKGALPDDMPELTITTE--NGEIAIANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A KI++  +++  L I               GK+      +
Sbjct: 345 DAGLVGSTSDAFRMIKQGAAKIDSEKVTDRSLVISA-----GTTAVYQVGKRKFARITI 398


>gi|163839558|ref|YP_001623963.1| tyrosyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953034|gb|ABY22549.1| tyrosyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 465

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 145/419 (34%), Positives = 218/419 (52%), Gaps = 11/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +   ++  EL+   S   VT Y G+D TA+SLH GHL QL+L+  LQ  
Sbjct: 46  NVWQELLWRGLVQVSTDQAELEKALSTETVTYYCGFDPTAASLHLGHLVQLLLMRRLQLA 105

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDP      R M   +++ E +  I+     F+ +  G+  A M+
Sbjct: 106 GHKPLALVGGSTGLIGDPRP-TTERSMQTKEQVAEWVADIQAQVQPFLSFE-GENAARMV 163

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LREIG  + V  M+  + V SRL  ++ +S+ EF+Y ILQ  DF+ 
Sbjct: 164 NNLDWTAPMSAIDFLREIGKHYRVGTMIKKDIVASRLNSDEGISYAEFSYQILQGLDFLS 223

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G +L  + +   + A+ +PL+T + GTK GK+   AIW
Sbjct: 224 LYRQYGCTLQSGGSDQWGNLTSGTELIRKAEGGAVHAIGTPLITNSDGTKFGKSEGNAIW 283

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           LN  MTSPY F+Q+W N  D+DVV   K  T    +EI  + K   +      A+K +A 
Sbjct: 284 LNPAMTSPYEFYQFWLNTADSDVVERLKIFTFRSRAEIAELEKATAERPHERTAQKALAW 343

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG-MGLLTLIV 357
           E+ ++VHG    EK   A+   F     S+         T  + +  V    +G++ L+V
Sbjct: 344 EVNSLVHGITATEKVIAASAAIFGNGELSELDEATLSAATAELPRATVPASTLGIVELLV 403

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S + ARR +      +NN+ I + +  I+         + L  GK+   +  +
Sbjct: 404 ATGLVESNSAARRTISDGGAYVNNTKILDAEYVIESTLLLHGRYLLLRRGKRTMAMVEV 462


>gi|40062628|gb|AAR37557.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 311]
          Length = 397

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 172/408 (42%), Gaps = 22/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I        L  +  +   +G+D TA  LH GH   L  L   Q  GH+ I
Sbjct: 8   LLLRGVEEVIPKEEFHKKLDKKRPLRIKLGFDPTAPDLHLGHTVILNKLKLFQDLGHQVI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T ++GDPS  +E+R ++  +EI++N +  +      +     K    +  N  W
Sbjct: 68  FLIGDFTGLVGDPSGVNETRPVLSEKEIKKNAKTYERQVFKILD----KKKTEIRFNSEW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +      + +R + S  +V RML  +    R   ++ +S  EF Y +LQ YD V L    
Sbjct: 124 MNKFSPEEFIR-LSSVQTVARMLERDDFHKRYTSQKPISIHEFLYPLLQGYDSVAL---- 178

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G ++ +          T PLL       KM K+L   I +   
Sbjct: 179 NADVELGGTDQKFNLLLGREVQKFYGKEPQVIFTLPLLEGLDGDKKMSKSLGNYIAIE-- 236

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITT 308
             S    +    +I D  +  + + L+     EI+++   + +G    + K ++A EI  
Sbjct: 237 -DSQNEIFGKIMSISDELMWRYFELLSFKKQEEINKLKKSQKEGLNPRDIKFLLAEEIVD 295

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG     KA       F        +  I I    + + + L  ++ +AG  +ST+EA
Sbjct: 296 RFHGEGSGNKAREEFKSRFQQGNSPSEIKEIEIKL--MEKDISLPKILKEAGMVSSTSEA 353

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R +K   ++I    I + K +I         ++    GK+      +
Sbjct: 354 LRLIKQGGVRIEGKKILDSKYKINR-----NSSLLYQVGKRKFFRIKI 396


>gi|187918237|ref|YP_001883800.1| tyrosyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|254783573|sp|B2S074|SYY_BORHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119861085|gb|AAX16880.1| tyrosyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 406

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 161/413 (38%), Positives = 249/413 (60%), Gaps = 8/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L IL +RGF+ Q +N   L +L  +  +  Y+G D T++SLH GHL   M +  LQ
Sbjct: 1   MNLALGILEKRGFLKQCTNLEALSVLMDREKMVFYVGVDATSTSLHIGHLIPFMAMAHLQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH PI+L+GGGT+ IGDPS +D  R+++  ++I+ N++ IK      I +  G     
Sbjct: 61  RQGHIPIALVGGGTTKIGDPSGKDVMRKILPKEDIEANVKAIKEQLLRIIDFSHGY---- 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  WL +I YI+ LR+IG +FSVNRML FE+ + RL  +  LSF+EFNY +LQ+YDF
Sbjct: 117 IIDNSEWLDNINYIEFLRDIGVYFSVNRMLGFETYKRRL--KDGLSFIEFNYQLLQSYDF 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +C+LQ+GG DQWGNI+ G+DL +R    ++F LT PL+T + G KMGK+  GA
Sbjct: 175 YMLNKLKNCKLQIGGDDQWGNIVSGVDLVKRKLGTEVFGLTLPLITRSDGKKMGKSEKGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+ ++ S Y+F+QY+RN+ D DV  F    T L   EI+ ++  QG  +N+AK+ +A 
Sbjct: 235 VYLDSKLYSVYDFYQYFRNVPDLDVKKFLYLFTFLEDDEIEHISSFQGYLLNKAKETLAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           EIT +VHG   A KA++AA   F         +P   ++   +   + L+ L+V +   +
Sbjct: 295 EITKIVHGESAALKASSAASAAFKGGEGDKSDIPFFKLALTSLEGTILLVDLMVSSKIVS 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EARR + S  + ++   I ++   +    F + G I+L  GKK  +   L
Sbjct: 355 SKSEARRLISSGGVYVDKVRIGDQNYCLNKDSF-ANGAIELRIGKKKILRIIL 406


>gi|322515509|ref|ZP_08068495.1| tyrosine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118476|gb|EFX90727.1| tyrosine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 396

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 99/411 (24%), Positives = 173/411 (42%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          +  N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILDP----NKTRVAFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +   + +  + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGT-EGMIRLASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL       KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
                 P + +    +I D  +  +   L+  P+ EI ++       K   + K ++A E
Sbjct: 239 T---DVPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAAGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADAAEQEFINRFQKGGIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|118581710|ref|YP_902960.1| tyrosyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504420|gb|ABL00903.1| tyrosyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 404

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 178/422 (42%), Gaps = 30/422 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M   K   + IL E+          +L+     G  +    G+D TA  LH GH   +  
Sbjct: 7   MAVIKRGAVEILIEKEL------EAKLEKSLKTGVPLRIKAGFDPTAPDLHLGHTVLIHK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +     
Sbjct: 61  LRQFQQLGHEVNFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPD-- 118

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++ N +WL  +     L  + S ++V RML  +    R   +Q +S  EF Y ++
Sbjct: 119 --KTKVVFNSSWLNDLG-CGGLIALASKYTVARMLERDDFHKRFSSQQPISIHEFLYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD V L       +++GG+DQ  N++ G +L           LT PLL       KM 
Sbjct: 176 QGYDSVALK----SDVELGGTDQKFNLLVGRELQREWGQEPQCVLTMPLLEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEI 295
           K+L   I +N+        +    +I D  +V + + L+ +P+ E++++ +         
Sbjct: 232 KSLGNYIGINEPGD---EIFGKVMSISDELMVRYYELLSDMPLPELEKLKQGLADNSLHP 288

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E KK +  E+    HG   A  A    ++ F  +     MP   IS       + L   
Sbjct: 289 METKKALGRELVGRFHGAAAARDAEENFVKRFRDNQIPDDMPQ--ISHCLADGTLLLARA 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +AG   S  EARR +    +K+N   ISN  L++        G   +  G++      
Sbjct: 347 MSEAGLTKSNGEARRSIDQGGVKLNGEKISNPNLELDAA-----GEYIVQIGRRRFGRII 401

Query: 416 LC 417
           + 
Sbjct: 402 VS 403


>gi|253997780|ref|YP_003049843.1| tyrosyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984459|gb|ACT49316.1| tyrosyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 400

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 175/408 (42%), Gaps = 23/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   L  L  LQ+ GH  +
Sbjct: 10  LIKRGCDELLIEQELVEKLKLGRPLRVKAGFDPTAPDLHLGHTVLLNKLRQLQELGHHVL 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  + ++++QEN +  +      +K         ++ N  W
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLTAEQVQENAKSYEAQVFKILKP----EQTEVVFNSAW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +    +L+   +  +V RML  +    R K  Q ++  EF Y +LQ YD VEL    
Sbjct: 126 ISQLGAAGMLKLAATH-TVARMLERDDFSKRYKNNQPIAIHEFLYPLLQGYDSVELK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              L++GG+DQ  N++ G +L +         LT PLL       KM K+L   I + + 
Sbjct: 182 -ADLELGGTDQKFNLLMGRELQKHYGQSPQCVLTMPLLEGLDGVNKMSKSLGNYIGIAEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
                + +    +I D  +  + + L+   M  I    +     +     K   A E+ T
Sbjct: 241 ---ANDIFSKLMSISDTLMWRYIELLSFESMETIASWKQSVEAGENPRNIKVRFAQELVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H  E AE+A                +P +SI+  +    +G+  L+ +AG   ST+EA
Sbjct: 298 RFHSAEAAEQALADFSL-RSKGGIPDDVPEVSIALAQ--DRIGIAALLKQAGLVASTSEA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R ++   +K+++  + ++ LQ+          +    GK+      +
Sbjct: 355 LRMIEQGGVKLDSEKVEDKALQLGA-----GVTVVAQVGKRKFARITI 397


>gi|212636577|ref|YP_002313102.1| tyrosyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212558061|gb|ACJ30515.1| Tyrosyl-tRNA synthetase, class Ib [Shewanella piezotolerans WP3]
          Length = 398

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 174/420 (41%), Gaps = 25/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLEQALAEI--KRGTDEILLEADLLEKLKEGRPLKIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +     +  + S  +V RM+  +  + R    Q+++  EF Y +LQ
Sbjct: 116 -KTRIEFNSSWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYGSGQAIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 174 GYDSVAL----ESDVELGGTDQKFNLLMGRELQKSSGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++     +       +I D  +  + + L+  P++EI++            +
Sbjct: 230 SAHNYIGVSEPAGEMF---GKIMSISDELMWRYFELLSFRPLAEIEQFKADIEAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    A+ A    +  F        +  + I+  E   G+ +  L+ 
Sbjct: 287 VKIALAKEIIARFHDEAAADAAHQEFINRFQKGALPSDIQELEIAAGE---GIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG  +ST++A R +K  A KI+ + I + ++Q+               GK+      L 
Sbjct: 344 EAGLVSSTSDAMRMIKQGAAKIDGNKIEDTRMQLTA-----GTTGVFQVGKRKFAKITLI 398


>gi|119773987|ref|YP_926727.1| tyrosyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119766487|gb|ABL99057.1| tyrosyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 399

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 94/418 (22%), Positives = 175/418 (41%), Gaps = 24/418 (5%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     ++ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIKRGTDEILLEADLIEKLKEGRPLRVKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RML  +  + R    Q ++  EF Y +LQ +
Sbjct: 117 TRIEFNSSWLEQLGA-AGMIRLASHQTVARMLERDDFKKRYGSGQPIAIHEFMYPLLQGW 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALK----ADIELGGTDQKFNLLMGRELQKAEGQKPQTVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAK 299
              I +++    P   +    +I D  +  +   L+  P++E+ +            + K
Sbjct: 232 HNYIGVSEA---PDEMFGKLMSISDELMWRYFDLLSFRPLAEVQQFKADVEAGANPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI    H +  A+ A    ++ F        +  +++S    + GM +  L+ +A
Sbjct: 289 IALAKEIIARFHDQAAADAAHQNFIDRFQKGAIPDDIEEVTLSAG--AEGMAVANLLKEA 346

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   ST++A R +K  A+K++   + + K       F +  +     GK+      L 
Sbjct: 347 GLVGSTSDAMRMIKQGAVKMDGEKLEDAKQV-----FSAGLSAVFQVGKRKFAKVTLS 399


>gi|297580604|ref|ZP_06942530.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535020|gb|EFH73855.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 434

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 215/432 (49%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAM-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSL--SELAQLEL-DGLPCV--------AA 361

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E                L  
Sbjct: 362 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEGGL--SGFALFDRYYVLQR 419

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 420 GKKQFALIKLEG 431


>gi|256851956|ref|ZP_05557343.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661474|ref|ZP_05862387.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282931937|ref|ZP_06337404.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256615368|gb|EEU20558.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547929|gb|EEX23906.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281303938|gb|EFA96073.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 420

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 141/423 (33%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N   +            G  + 
Sbjct: 63  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y ILQ  D
Sbjct: 119 QIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQILQGID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L ++Y  ++Q+GGSDQWGNI  GIDL  R        F LT PL+  A GTK GK+ 
Sbjct: 177 FYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EID +A+    E    EA+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDALAEKVKNEPWKREAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  ++    +  I        S +  +    L+
Sbjct: 297 KTLAAEVTKFVHGEAGLEEAQMITDALFSGNVKELSVKQIEQALKNAPSAESSNEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V     +S  +AR  +++ AI +N + +   + ++          + +  GK+ + +
Sbjct: 357 DFLVDTKIESSKRQAREDIQNGAIYVNGNKVQELEFEVDPSASFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|313199844|ref|YP_004038502.1| tyrosyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439160|gb|ADQ83266.1| tyrosyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 402

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 178/419 (42%), Gaps = 25/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A   D    L +RG    +     ++ L     +    G+D TA  LH GH   L  L
Sbjct: 1   MRALNEDL--ALIKRGCDELLIEQELVEKLKLGRPLRVKAGFDPTAPDLHLGHTVLLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH  + L+G  T +IGDP+ +  +R  + ++++QEN +  +      +K     
Sbjct: 59  RQLQELGHHVLFLIGDFTGMIGDPTGKSATRPPLTAEQVQENAKSYEAQVFKILKP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W+  +    +L+   +  +V RML  +    R K  Q ++  EF Y +LQ
Sbjct: 115 EQTEVVFNSAWISQLGAAGMLKLAATH-TVARMLERDDFSKRYKNNQPIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD VEL       L++GG+DQ  N++ G +L +         LT PLL       KM K
Sbjct: 174 GYDSVELK----ADLELGGTDQKFNLLMGRELQKHYGQSPQCVLTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I + +      + +    +I D  +  + + L+   M  I    +     +    
Sbjct: 230 SLGNYIGIAEP---ANDIFSKLMSISDTLMWRYIELLSFESMETIASWKQSVEAGENPRN 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K   A E+ T  H  E AE+A                +P +SI+  +    +G+  L+ 
Sbjct: 287 IKVRFAQELVTRFHSAEAAEQALADFSL-RSKGGIPDDVPEVSIALAQ--DRIGIAALLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +K+++  + ++ LQ+          +    GK+      +
Sbjct: 344 QAGLVASTSEALRMIEQGGVKLDSEKVEDKALQLGA-----GVTVVAQVGKRKFARITI 397


>gi|15640492|ref|NP_230119.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121590714|ref|ZP_01678046.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|153819164|ref|ZP_01971831.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823181|ref|ZP_01975848.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227080675|ref|YP_002809226.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507103|ref|ZP_04396609.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229509061|ref|ZP_04398549.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519729|ref|ZP_04409172.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606242|ref|YP_002876890.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850696|ref|ZP_05240046.1| tyrosyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298501004|ref|ZP_07010805.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9654891|gb|AAF93638.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547445|gb|EAX57554.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126510309|gb|EAZ72903.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126519307|gb|EAZ76530.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227008563|gb|ACP04775.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229344418|gb|EEO09393.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353986|gb|EEO18920.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355848|gb|EEO20768.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229368897|gb|ACQ59320.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846401|gb|EET24815.1| tyrosyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297540252|gb|EFH76312.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 434

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 146/432 (33%), Positives = 215/432 (49%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +        +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQGENCASLMAV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSL--SELAQLEL-DGLPCV--------AA 361

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E                L  
Sbjct: 362 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEGGL--SGFALFDRYYVLQR 419

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 420 GKKQFALIKLEG 431


>gi|255744288|ref|ZP_05418241.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262147287|ref|ZP_06028086.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|97202332|sp|Q9KUQ0|SYY1_VIBCH RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|255738228|gb|EET93620.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262031281|gb|EEY49896.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 426

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 146/432 (33%), Positives = 215/432 (49%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +        +LM +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQGENCASLMAV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSL--SELAQLEL-DGLPCV--------AA 353

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E                L  
Sbjct: 354 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEGGL--SGFALFDRYYVLQR 411

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 412 GKKQFALIKLEG 423


>gi|157960823|ref|YP_001500857.1| tyrosyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|157845823|gb|ABV86322.1| tyrosyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 398

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 171/420 (40%), Gaps = 25/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I   RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLEQALAEI--RRGTDEILLEADLLEKLKEGRPLKIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIEFNSTWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYGSGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKSAGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++     +       +I D  +  + + L+  P++E+++            +
Sbjct: 230 SAHNYIGVSEPAGEMF---GKIMSISDDLMWRYFELLSFRPLTEVEQFKADVDAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    +  F        +  + I+  E   G+ +  L+ 
Sbjct: 287 VKIALAKEIIARFHDEAAAEAAHQEFINRFQKGAIPSDIEELEIAAGE---GIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   ST++A R +K  A KI+   I + +LQ+               GK+      L 
Sbjct: 344 EAGLVNSTSDAMRMIKQGAAKIDGDKIEDTRLQLTA-----GTTAVFQVGKRKFAKITLV 398


>gi|320354886|ref|YP_004196225.1| tyrosyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123388|gb|ADW18934.1| tyrosyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 404

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 101/411 (24%), Positives = 175/411 (42%), Gaps = 27/411 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L ERG +   S    +  L     +   +    G+D TA  LH GH   L  L   Q  G
Sbjct: 10  LIERGAVDFHSREDLVKKLTRSLETGKPLIVKAGFDPTAPDLHLGHTVLLQKLRHFQLLG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+   L+G  T +IGDP+ + ++R  +  ++++ N E  K      +          ++ 
Sbjct: 70  HEVNFLIGDFTGLIGDPTGKSDTRPPLTPEDVKRNAETYKEQVFKILDPQ----KTKVVF 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL  +   +++  + S  +V RML  +  + R +  + +S  EF Y ++Q YD V +
Sbjct: 126 NSTWLGQLSSYEMI-RLASELTVARMLERDDFKKRFESNRPISIHEFLYPLIQGYDSVAM 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G DL           LT PLL       KM K+L   I 
Sbjct: 185 K----ADVELGGTDQLFNVLMGRDLQRSRGQEPQVVLTMPLLEGLDGVNKMSKSLGNYIG 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIA 303
           +++    P + +    +I D  +  + + L+ L + EI                 K  +A
Sbjct: 241 ISEP---PDSIFGKIMSISDDLMFRYYELLSDLSLEEIQALKTKIARGELHPKAVKVQLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H RE AE A     + F      + +  + ++  E    + +  L++ AG   
Sbjct: 298 KEMVTRFHDREAAENAERNFEQVFARHELPEDIEEVRLAVAEAE--IWVPKLLLDAGLVK 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ST++ RR ++ +A+ I    IS+    +  +     G I L  GK+     
Sbjct: 356 STSDGRRMIQQHAVTIEGEKISDINAVVPTK-----GEILLKVGKRRFCRV 401


>gi|127511955|ref|YP_001093152.1| tyrosyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|126637250|gb|ABO22893.1| tyrosyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 398

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 171/420 (40%), Gaps = 25/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M         I  +RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MANLDQALAEI--KRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIEFNSSWLEELGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKAAGQKPQAVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           + +  I +++     +       +I D  +  + + L+  P+ EI ++           +
Sbjct: 230 SANNYIGVSEPAGEMF---GKIMSISDDLMWRYFELLSFRPLEEIAQLKSDVDNGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    +  F        +  I I+  +   G+G+  ++ 
Sbjct: 287 VKIALAKEIIARFHDEAAAEAAHQEFINRFQKGAIPDDIQEIEIAAGD---GIGIANVLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG  +ST+EA R +K  A K++   I + +L +               GK+      L 
Sbjct: 344 DAGLVSSTSEAMRMIKQGAAKLDGDKIEDSRLVLNA-----GMTGVFQVGKRKFAKITLV 398


>gi|119472227|ref|ZP_01614406.1| Tyrosyl-tRNA synthetase II [Alteromonadales bacterium TW-7]
 gi|119445045|gb|EAW26340.1| Tyrosyl-tRNA synthetase II [Alteromonadales bacterium TW-7]
          Length = 399

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 24/413 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     ++ L S   +    G+D TA  LH GH   +  +   Q  GH
Sbjct: 7   LAEIK-RGAEEILIEDELVEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKMKTFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +          +  N
Sbjct: 66  EVIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPA----KTTVAFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TW+  +     + ++ +  +V RML  +  + R    Q ++  EF Y ++Q +D V L 
Sbjct: 122 STWMEKLGA-AGMIKLAANQTVARMLERDDFKKRYNGGQPIAIHEFLYPLVQGWDSVAL- 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +         L  PLL  T    KM K+L   I +
Sbjct: 180 ---ESDVELGGTDQRFNLLMGRELQKVEGQKPQTVLMMPLLEGTDGVQKMSKSLGNYIGI 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+ L + +I    +   QG    + K  +A E
Sbjct: 237 T---DAPNDMFGKVMSISDVLMWRYYDLLSGLSIEQIAAQKERVEQGTNPRDIKIELAKE 293

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  E+A+ A    ++ F        +P ++++  E    + +  L+ +A    ST
Sbjct: 294 LIARFHSEEDAQAAHNDFIQRFQKKALPDEIPELTVTIAE--DTILIANLLKEANLVAST 351

Query: 366 NEARRHLKSNAIKINN-SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R +K  A+K+N    I++ KL+I               GK+      + 
Sbjct: 352 SEAMRMIKQGAVKLNGEEKITDTKLEIA-----KGTTAIYQVGKRKFANITVA 399


>gi|119115583|ref|XP_311148.3| tyrosyl-tRNA synthetase (AGAP000012-PA) [Anopheles gambiae str.
           PEST]
 gi|116130907|gb|EAA06615.3| tyrosyl-tRNA synthetase (AGAP000012-PA) [Anopheles gambiae str.
           PEST]
          Length = 463

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 130/435 (29%), Positives = 215/435 (49%), Gaps = 25/435 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDI---LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L +RGFI  +     +D    +      T Y G+D TA+SLH G+L  L+ L 
Sbjct: 27  ERNILK-LRDRGFIQDVFPAETIDKASSMLGSTCQTVYAGFDPTANSLHVGNLLVLIGLL 85

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--------F 113
             Q+ GH+PI+L+GG T +IGDPS R   R+ + ++ ++ N+  I+    +        F
Sbjct: 86  HTQRAGHQPIALVGGATGLIGDPSGRKTERQQLETEAVEHNVTCIRRQIETIFANHERFF 145

Query: 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
               +     L++NN  W     ++D +  +G  F +  MLS  SV++RL  E  +SF E
Sbjct: 146 WDRPSSLKPVLVVNNADWYRQYSFVDFMANVGRHFRMGAMLSRSSVQTRLTSESGMSFTE 205

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F+Y + QAYD++ L + ++CR Q+GGSDQ GNI+ G +L  R    ++F LT PL+T   
Sbjct: 206 FSYQLFQAYDWLHLLRQHNCRFQLGGSDQMGNIMSGQELISRTDGKEVFGLTLPLVTNEE 265

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G K GK+   A+WL+ + TSPY  +Q++    D++V    + LT LP+  I++      +
Sbjct: 266 GDKFGKSAGNAVWLSDDRTSPYAMYQFFVRTPDSEVEKLLRLLTFLPVQTIEQAMARHRR 325

Query: 294 EI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SI 341
                EA+K++A E+T +VHG     KA   +   ++  + +     +           +
Sbjct: 326 TPELWEAQKLLAGELTKLVHGEAGLYKAMAISRALYNGDLSTLEQLEVRDVAQSFGGAPL 385

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTG 400
            +     GM +L + ++A    S  +A R + +    IN     N    +       S  
Sbjct: 386 CEILPEPGMTVLDVALRARCFPSRADAERIIGAGGFSINLKKAKNPAEVLSPSVHILSNR 445

Query: 401 NIKLSFGKKNHIICH 415
              L  GK+N+ I  
Sbjct: 446 ISLLRVGKRNYYIVK 460


>gi|258623090|ref|ZP_05718103.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258584703|gb|EEW09439.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 395

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N +  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNADTYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKVDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEMPEF-----EFDSGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVASTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTAVYQVGKRKFARVTI 394


>gi|297172660|gb|ADI23628.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_06A21]
          Length = 401

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 177/412 (42%), Gaps = 23/412 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG    +      + L S   +    G+D TA  LH GH   +  +   Q  G
Sbjct: 9   VFEELQ-RGVEEILVEDELKERLRSGRPLRVKTGFDPTAPDLHIGHTVLVNKMRQFQTFG 67

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T +IGDPS ++ +R  +  Q+I+EN    +      +          +  
Sbjct: 68  HEVVFLIGDFTGLIGDPSGKNATRPPLSRQQIEENAATYEEQVFKILDRDQ----TRIEF 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  +    + +  + +  +V RML  +    R +  + +S  EF Y ++Q YD V L
Sbjct: 124 NSKW-GNALGAEGMIRLAARHTVARMLERDDFSRRYQNGEPISIHEFLYPLMQGYDSVVL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  +++GG+DQ  N++ G +L ++        LT PLL       KM K+L  AI 
Sbjct: 183 ----EADVELGGTDQKFNLLVGRELQKQYGQKPQVVLTMPLLEGLDGVQKMSKSLGNAIG 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           + +    P   +    +I D  +  + + L+   + EI   R +  +G    + K  +A 
Sbjct: 239 ITEP---PAEMFGKLMSISDDLMWRYFELLSFRSVVEIRALRRSTEEGANPRDVKYELAL 295

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H +  A++A  A ++ F   +  + +  + +       GM +  ++  AG   S
Sbjct: 296 EIVTRFHSKSSADRAKQAFVDRFQKGVLPEDLQEVDVDSK--GEGMSVTHVMRAAGLVAS 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+E  R +   A++I+   +S+  LQ+          + +  GK+     +L
Sbjct: 354 TSEGLRLIDQGAVRIDGERVSDRALQLPR-----GSRVVVRVGKRKLARINL 400


>gi|262163955|ref|ZP_06031694.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027483|gb|EEY46149.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 395

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEMPEF-----EFDSGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTAVYQVGKRKFARVTI 394


>gi|332535490|ref|ZP_08411271.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035100|gb|EGI71615.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 399

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 178/413 (43%), Gaps = 24/413 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     ++ L S   +    G+D TA  LH GH   +  +   Q  GH
Sbjct: 7   LAEIK-RGAEEILIEDELVEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKMKTFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +          +  N
Sbjct: 66  EVIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPA----KTTVAFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TW+  +     + ++ +  +V RML  +  + R    Q ++  EF Y ++Q +D V L 
Sbjct: 122 STWMEKLGA-AGMIKLAANQTVARMLERDDFKKRYGSGQPIAIHEFLYPLVQGWDSVAL- 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +         L  PLL  T    KM K+L   I +
Sbjct: 180 ---ESDVELGGTDQRFNLLMGRELQKVEGQKPQTVLMMPLLEGTDGVQKMSKSLGNYIGI 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+ L + EI    +   QG    + K  +A E
Sbjct: 237 T---DAPNDMFGKIMSISDVLMWRYYDLLSALSIEEIAAQKERVEQGTNPRDIKIELAKE 293

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H   +A+ A    ++ F        +P ++I+  E    + +  L+ +A    ST
Sbjct: 294 LIARFHSEADAQGAHDDFIQRFQKKALPDEIPELTITIAE--DTILIANLLKEANLVVST 351

Query: 366 NEARRHLKSNAIKINNS-IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R +K  A+K+N    I++ KL++               GK+      + 
Sbjct: 352 SEAMRMIKQGAVKLNGEDKITDTKLEVA-----KGTTAIYQVGKRKFANITVA 399


>gi|195027758|ref|XP_001986749.1| GH21538 [Drosophila grimshawi]
 gi|193902749|gb|EDW01616.1| GH21538 [Drosophila grimshawi]
          Length = 464

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 133/446 (29%), Positives = 214/446 (47%), Gaps = 32/446 (7%)

Query: 2   PAFKSDF----LSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHL 54
             FK  F    L  LS+RGF   I   +   ++  L      T Y G+D TA SLH G+L
Sbjct: 17  TNFKRTFTHKNLLELSDRGFFQSIFPDTAGPKMKELFRSAPQTVYAGFDPTADSLHVGNL 76

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             +M L   Q+ GH+PI+L+GG T +IGDPS R   R  M    I+ N++ I+       
Sbjct: 77  LVIMGLLHCQRAGHQPIALVGGATGLIGDPSGRKTERNQMGVSVIESNLQAIELQLRKVF 136

Query: 115 KYGT-----------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           K                    ++NN  W  ++  ID +  +G  F +  MLS  SV+SRL
Sbjct: 137 KNHEDCLWDARKDSSPFVPLKIVNNAEWYANLNLIDFVANMGRHFRMGSMLSRSSVQSRL 196

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLF 222
           + E  +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F
Sbjct: 197 ESEDGMSFTEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQTGNLMTGHELISRVEGNREVF 256

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            +T P++T   G K GK+   A+WL+++ TSP+  +Q++  + D++V    K  T +P+ 
Sbjct: 257 GMTLPIVTNEEGDKFGKSAGNAVWLDEKKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLP 316

Query: 283 EIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS---------- 330
           E++++ +      E  +A+ ++A ++T +VHG    ++A       +  +          
Sbjct: 317 EVEQLMREHAKEPEKRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELNYT 376

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              Q     ++       GM +L L +KA    +  +A R + +    IN   + N    
Sbjct: 377 EIKQTFQGATVVDILTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYINQKRVQNIAEV 436

Query: 391 IKLQ-DFDSTGNIKLSFGKKNHIICH 415
           I         G   L  GK+N  I  
Sbjct: 437 ITTGIHILRNGVSLLRVGKRNFYIVR 462


>gi|297205173|ref|ZP_06922569.1| tyrosine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149751|gb|EFH30048.1| tyrosine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 424

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 141/423 (33%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 7   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N   +            G  + 
Sbjct: 67  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF----GTENF 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y ILQ  D
Sbjct: 123 QIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQILQGID 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTL 241
           F  L ++Y  ++Q+GGSDQWGNI  GIDL  R        F LT PL+  A GTK GK+ 
Sbjct: 181 FYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNERPAFGLTIPLMLKADGTKFGKSA 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EID +A+    E    EA+
Sbjct: 241 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDALAEKVKNEPWKREAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  ++    +  I        S +  +    L+
Sbjct: 301 KTLAAEVTKFVHGEAGLEEAQMITDALFSGNVKELSVKQIEQALKNAPSAESSNEKKNLV 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V     +S  +AR  +++ AI +N + +   + ++          + +  GK+ + +
Sbjct: 361 DFLVDTKIESSKRQAREDIQNGAIYVNGNKVQELEFEVDPSASFDGKYVIIRKGKRKYTL 420

Query: 414 CHL 416
             +
Sbjct: 421 VTI 423


>gi|29653535|ref|NP_819227.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154706075|ref|YP_001425233.1| tyrosyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|81629599|sp|Q83EX7|SYY_COXBU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29540797|gb|AAO89741.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154355361|gb|ABS76823.1| tyrosyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 399

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 185/414 (44%), Gaps = 23/414 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +          + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTREIVMENTKTYETQAFRILDPD----KTQVT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  D L  + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKA-DDLVRLAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LK----ADVELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R      +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +T+E  R +   A++I+   + + KL I         +     GK+      + 
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIPR-----GESHLFQVGKRRFAKVKVI 399


>gi|152999747|ref|YP_001365428.1| tyrosyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151364365|gb|ABS07365.1| tyrosyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 397

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 96/418 (22%), Positives = 174/418 (41%), Gaps = 26/418 (6%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPV----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALQ----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++  +         + K
Sbjct: 232 HNYIGVSEPANEMF---GKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI T  H    AE A  A ++     +    +  I +   E   G+ +  L+  A
Sbjct: 289 IALAKEIITRFHDEASAESAHQAFVD-RAKGMIPDDIEEIELVAGE---GIAIANLLKDA 344

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               ST+EA R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 345 DLVASTSEAMRMIKQGAVKMDGEKLDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 397


>gi|269966929|ref|ZP_06181001.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828412|gb|EEZ82674.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 395

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEDRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I +++    P   +    +I D  + S+ + L+  P+ EI +        K   +
Sbjct: 230 SANNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEYDADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGRPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   S+++A R +K  A+KI+   I++ K   +       G      GK+      +
Sbjct: 342 EAGLCPSSSDAMRMVKQGAVKIDGEKIADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|262172293|ref|ZP_06039971.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893369|gb|EEY39355.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 395

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLKIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEMPEF-----EFDSGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVASTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTAVYQVGKRKFARVTI 394


>gi|291288189|ref|YP_003505005.1| tyrosyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885349|gb|ADD69049.1| tyrosyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 402

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 171/419 (40%), Gaps = 34/419 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L  L  RG    IS    L  L         +    G+D TA  LH GH   +  L   Q
Sbjct: 8   LEQLK-RGCEEIISEEDLLKKLTKSYETDTPLRVKAGFDPTAPDLHLGHTVLIQKLKHFQ 66

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHK I L+G  T +IGDPS ++E+R+ +  +++  N E  K      +          
Sbjct: 67  DLGHKIIFLIGDFTGMIGDPSGKNETRKALTREDVLANAETYKEQVFKILDP----EKTE 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W+  +     +  + S ++V RML  +    R K  + +S  EF Y ++Q YD 
Sbjct: 123 VAFNSVWMKDMSA-SDMIRLTSHYTVARMLERDDFSKRYKENRPISIHEFIYPLIQGYDS 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSG 243
           V L       ++MGG+DQ  N++ G DL          ALT P+L       KM K+L  
Sbjct: 182 VALK----SDVEMGGTDQKFNLLVGRDLQRAYGQAPQIALTMPILEGLDGVQKMSKSLGN 237

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKK 300
            I + +   SP + +    +I D  +  +   L+   + +I+ + +      K   + KK
Sbjct: 238 YIGITE---SPKDMFGKVMSITDELMFRYYLLLSDRSLEDINILKQSVADGSKHPMDVKK 294

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H  E A++A     + F    +   MP   I  D     + L+ +I K G
Sbjct: 295 ELAMEIVARFHSEEAAKEAREGFEQVFSKRENPDEMPEYKIGTD-----VKLIDVITKNG 349

Query: 361 F--ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
                S +EARR  K   I I+   + +    +        G   L  GK+      + 
Sbjct: 350 LNFLPSNSEARRLAKQGGIYIDGDKVEDIDQCL------HAGQYVLKVGKRKFAKLTVS 402


>gi|328952109|ref|YP_004369443.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452433|gb|AEB08262.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 406

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 99/413 (23%), Positives = 173/413 (41%), Gaps = 27/413 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG +  +        L     S   +    G+D TA  LH GH   +  L   Q+ G
Sbjct: 9   LIRRGAVEILLEEELAAKLKRSLASGQPLRIKAGFDPTAPDLHLGHTVLIQKLKHFQELG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+G  T +IGDPS + E+R+ +  +E++ N    +      +         L+  
Sbjct: 69  HQVIFLIGDFTGMIGDPSGKSETRKPLTEEEVKANALTYERQIYKILDP----EKTLIDF 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+        L E+ +  +V RML  E    R      +S  EF Y ++Q YD V L
Sbjct: 125 NSRWM-KAMSAQGLIELAARHTVARMLEREDFHQRFVNHAPISIHEFLYPLVQGYDSVAL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G +L           LT PLL       KM K+L   + 
Sbjct: 184 R----ADVELGGTDQKFNLLVGRELQREYGQEPQVVLTMPLLEGLDGVNKMSKSLGNYVG 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIA 303
           +++    P   +    +I D  ++ + + L+ L +  + R+             AK+ +A
Sbjct: 240 IDEP---PQEMFGKIMSISDVLMLRYYELLSDLSVGALARLKDDLASGVLHPRLAKENLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+    H    AE+AA      F      + +  I ++  E    + L  ++ +AG A 
Sbjct: 297 KEMVARYHSPGAAEEAARQFAAVFREGALPEEIEEICLAVTE--NSIWLPKVLHQAGLAA 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            T+EARR ++   ++++   +S+ +L++ +          L  GK+      L
Sbjct: 355 GTSEARRLIQQGGVQVDGEKVSSVELELPV-----GQTYLLRVGKRKFKKVEL 402


>gi|26554251|ref|NP_758185.1| tyrosyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747514|sp|Q8EUX2|SYY_MYCPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|26454260|dbj|BAC44589.1| tyrosyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 411

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 177/412 (42%), Positives = 255/412 (61%), Gaps = 5/412 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + L  L +RG+I+Q SN   ++    +G  + YIG+D TA SLH GH   +M +  LQ
Sbjct: 3   NKNILEFLKKRGYIYQGSNFDLIEKELIKG-TSFYIGFDPTADSLHVGHFLTMMAVKHLQ 61

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+ P+ ++GGGT  +GDPS R E R+++  + I  N E +K   S FI +  GK  A+
Sbjct: 62  KAGNNPVIVVGGGTGSVGDPSGRSEIRKILDRKTIDYNCECLKKQMSKFISFE-GKNKAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  I +I+ LRE G  FSVN+ML+ E+ + R ++E  LSFLEFNYM++QAYDF
Sbjct: 121 MVNNADWLLKINWIEFLREFGVCFSVNKMLAAEAFKVRFEQESGLSFLEFNYMLMQAYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +NY+  +Q+GGSDQW NI+ G+DL  R  + + FALT  LLT   GTKMGKT +GA
Sbjct: 181 YYLNQNYNVNIQLGGSDQWSNILAGVDLIRRKSSKEAFALTLNLLTKHDGTKMGKTATGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+K  TSPY F+QYW NIDD DV  F   LT L    I  + K +GK+I EAKK++A+
Sbjct: 241 IWLDKNKTSPYEFYQYWLNIDDQDVERFLLLLTELDDKTISDLCKEKGKKIVEAKKVLAS 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T M+HG+EE +KA   +   F+    S ++PT  +   +++    +  ++V    + S
Sbjct: 301 ELTKMIHGQEELDKAIEQSKAAFEN--ASDNLPTYELKASDLNNDYSIANILVVTKLSPS 358

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             E+RR + SNA+ +N + I++   +++    D T    L  GKKNHI   +
Sbjct: 359 KAESRRLITSNAVSVNETKITDVNTKLEDLKIDQTNFT-LHKGKKNHIKVII 409


>gi|297182040|gb|ADI18214.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0200_40H22]
          Length = 405

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 182/422 (43%), Gaps = 28/422 (6%)

Query: 1   MPAFKS-----DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M   K+     D L+ L  RG    +     L+ L     +   +G+D TA  LH GH  
Sbjct: 1   MTESKNQAAFQDVLAELK-RGVEEMLLEEELLERLALDRPLRVKVGFDPTAPDLHLGHTV 59

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  +   Q+ GH+ + L+G  T +IGDPS ++ +R  + ++EI+ N    K      + 
Sbjct: 60  IINKMRQFQELGHEVVFLIGDFTGMIGDPSGKNVTRPPLTAEEIESNATTYKAQVFRILD 119

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                   L+  N  W   +   + +  + S  +V RML  +    R K  Q ++  EF 
Sbjct: 120 P----EKTLVEFNSKWCSELGA-EGIIRLASRHTVARMLERDDFSKRYKSGQPIAIHEFL 174

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASG 234
           Y ++Q YD V L       ++MGG+DQ  N++ G +L ++   P    +T PLL      
Sbjct: 175 YPLMQGYDSVALK----TDVEMGGTDQKFNLLVGRELQKQYGQPSQVVMTLPLLEGLDGV 230

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK- 293
            KM K+L   + +     +P + +    ++ D  +  + + L+   + EI+++ +     
Sbjct: 231 QKMSKSLGNTVGIT---DAPDDMFGKLMSVSDDLMWRYFELLSFKSLPEIEKLHESVVSG 287

Query: 294 -EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
               + K  +A EI    H   +  KA    +E F        +   ++S D    G+G+
Sbjct: 288 ANPRDVKFELAREIVDRFHTAGDGSKAQQRFVERFSQGGVPDDLEEKTLSSD--GDGLGI 345

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + I +AG A+ST+EA R +K  A++ +   + + K  +            L  GK+   
Sbjct: 346 ASAIKQAGLASSTSEAIRLIKQGAVRFDGERLEDPKTVLAA-----GTTGILQVGKRRIA 400

Query: 413 IC 414
             
Sbjct: 401 KV 402


>gi|194886727|ref|XP_001976671.1| GG19890 [Drosophila erecta]
 gi|190659858|gb|EDV57071.1| GG19890 [Drosophila erecta]
          Length = 464

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 129/439 (29%), Positives = 216/439 (49%), Gaps = 29/439 (6%)

Query: 5   KSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I   +    +  L + G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QRNLL-ELTDRGFFQGIFPDTAAPRMKQLFTGGQQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHEHCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K         ++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +S
Sbjct: 144 WDSNKQKFPLPPLTVVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTI----- 339
                 E  +A+ ++A ++T +VHG    ++A       +      +   ++P I     
Sbjct: 324 EHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLPEIQQTFQ 383

Query: 340 --SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
             ++       GM +L L +KA    +  +A R + +    +N   + N    +      
Sbjct: 384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHI 443

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GK+N  I  
Sbjct: 444 LRNGISLLRVGKRNFYIVR 462


>gi|170725574|ref|YP_001759600.1| tyrosyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|169810921|gb|ACA85505.1| tyrosyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 398

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 98/412 (23%), Positives = 175/412 (42%), Gaps = 24/412 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     L+ L     +   +G D TA  +H GH   L  +   Q+ GH
Sbjct: 8   LAEIK-RGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRTFQELGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          +  N
Sbjct: 67  EVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPA----KTRIEFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ YD V L 
Sbjct: 123 SSWLEPLGA-AGMIRLASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYDSVAL- 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +         +  PLL       KM K+    I +
Sbjct: 181 ---EADVELGGTDQKFNLLMGRELQKSKGQKPQTVIMMPLLEGLDGVKKMSKSAHNYIGV 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           ++     +       +I D  +  + + L+  P+SEI++  +   QG    + K  +A E
Sbjct: 238 SEPAGEMF---GKIMSISDDLMWRYLELLSFRPLSEIEQFKRDVEQGTNPRDIKIALAKE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H    AE A    +  F        +  + I+   V  G+ +  L+ +AG   ST
Sbjct: 295 IIARFHDEAAAEGAHQEFINRFQKGAIPDDIEELEIA---VGEGIAIANLLKEAGLVNST 351

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  R +K  A KI+ + I + +LQ+         +     GK+      L 
Sbjct: 352 SDGMRMIKQGAAKIDGAKIDDTRLQLTA-----GTSGVFQVGKRKFAKITLV 398


>gi|296133365|ref|YP_003640612.1| tyrosyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031943|gb|ADG82711.1| tyrosyl-tRNA synthetase [Thermincola potens JR]
          Length = 407

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 100/415 (24%), Positives = 188/415 (45%), Gaps = 26/415 (6%)

Query: 11  ILSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG    +     ++ L      +  +   +G D TA  +H GH   L  L   Q+ 
Sbjct: 10  EIIKRGVAEIVPENELVEKLKKSIARKKPLHIKLGLDPTAPDIHLGHTVVLQKLRQFQEL 69

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK   ++G  T+ IGDP+ + E+R+ +  +E+++N    K      +          ++
Sbjct: 70  GHKVTIILGDYTARIGDPTGKSETRKQLTEEEVRKNAATYKEQIFKILDPA----KTNVV 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL S+ + D++  + + ++V RML  +    R   EQ +S  EF Y ++Q YD V 
Sbjct: 126 FNSQWLASLSFADII-NLAAKYTVARMLERDDFAKRFANEQPISIHEFFYPLMQGYDSVA 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L    +  +++GG+DQ  N++ G  L +        AL  P+L       KM K+L   I
Sbjct: 185 L----EADVELGGTDQKFNLLMGRHLQKEYGQEPQVALMMPILEGLDGVQKMSKSLGNYI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKII 302
            + +   SP   +    +I D  ++ + + +T + ++E   I+   K       + K  +
Sbjct: 241 GITE---SPREMYGKTMSIADELMIRYFELVTPVSLAEIRDIEEGMKNGALHPRDVKMRL 297

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGF 361
           A EI TM HGRE A KA       F        +P   + K+++  G + L  L+  AG 
Sbjct: 298 AREIVTMYHGREAALKAEEEFKSIFQKKELPDEIPEYVLDKNQLEEGEIWLPKLMALAGL 357

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +S++E RR +    +++N+  + +   +++ +       + +  GK+  +   +
Sbjct: 358 VSSSSEGRRLVIQGGVRVNDKKVVDPAAKVQPE-----NGMIIKAGKRKFVKIVV 407


>gi|91228939|ref|ZP_01262836.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187499|gb|EAS73834.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 395

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEDRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I +++    P   +    +I D  + S+ + L+  P+ EI +        K   +
Sbjct: 230 SANNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSESDADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGRPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   S+++A R +K  A+KI+   I++ K   +       G      GK+      +
Sbjct: 342 EAGLCPSSSDAMRMVKQGAVKIDGEKIADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|298530310|ref|ZP_07017712.1| tyrosyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509684|gb|EFI33588.1| tyrosyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 400

 Score =  312 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 102/410 (24%), Positives = 173/410 (42%), Gaps = 26/410 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +  +S    L  +  +  +    G+D TA  LH GH   +  L   Q+ GH  +
Sbjct: 11  LIRRGSVEIVSESELLKKMDRKKPLRVKAGFDPTAPDLHLGHTVLIQKLKHFQELGHHVL 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS + E+R+ +  QE+ +N E  K      +          ++ N TW
Sbjct: 71  FLIGDFTGMIGDPSGKSETRKKLTRQEVIQNAETYKRQIFRIL----HPEKTELVFNSTW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +      D +  + S ++V RM+  +    R +  +S++  EF Y ++Q YD VEL    
Sbjct: 127 MDKFHAADFVE-LCSRYTVARMMERDDFDKRFRENRSIAVHEFLYPLIQGYDSVELK--- 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL           LT P+L       KM K+L   + + + 
Sbjct: 183 -ADVELGGTDQKFNLLVGRDLQREYGQEPQVILTVPILEGLDGVQKMSKSLDNYVGIEEP 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT---LPMSEIDRMAKLQGKEINEAKKIIATEIT 307
               Y       +I D  +  + + L+      +  +    +         K+ +A EIT
Sbjct: 242 ARDMY---GKLMSISDELMWRYFELLSDKNLNDIEAMRENVEQGRLHPKYCKEELAMEIT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H R+ AEK        F      Q MP  S+S  E  R   L  ++V++    S +E
Sbjct: 299 ARFHDRQAAEKERENFNRVFSAHEMPQDMPEFSVSPAENKR---LADILVESRLCPSRSE 355

Query: 368 ARRHLKSNAIKI-NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A+R  +  A+ + N   +++ +           G   L  GKK  +   +
Sbjct: 356 AKRLCRQKAVGLYNGEKLTDPEAVFGA------GEYTLKVGKKRFLKLKV 399


>gi|86157471|ref|YP_464256.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|97197467|sp|Q2IPT7|SYY_ANADE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85773982|gb|ABC80819.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 420

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 150/425 (35%), Positives = 227/425 (53%), Gaps = 19/425 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + L  L  R  +H  +    L    +QG +T Y+G+D TA SLH GHL  +M L WLQ
Sbjct: 1   MQNLLEALVPRSLVHDQTP--GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQ 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A 
Sbjct: 59  RCGGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSFE-GQNAAR 117

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL SI  ++ LR++G  F+VN ML+ +SV+ R+  E  +SF EF+Y ++QAYDF
Sbjct: 118 VRNNADWLRSIGLMEFLRDVGKHFTVNYMLAKDSVKGRM--ESGISFTEFSYQLIQAYDF 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L     C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA
Sbjct: 176 WHLFHAERCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+   TSPY F+Q+W N DD DV    K  T L + EI      + +      A++ +
Sbjct: 236 VWLDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSLDEIAALLAEQARDPGKRPAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A ++T  VHG +       A+   F  +                +P+ +++ DE++  + 
Sbjct: 296 AEDVTARVHGPDVTRSVIEASRILFGGTDLRAAGVDVLDVLAGEIPSATVTGDELAA-LT 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  L+VK G A S  E RR +      +N +++ +   ++   +  + G   L  GK+N+
Sbjct: 355 VADLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGELLAGGYALLQKGKRNY 414

Query: 412 IICHL 416
            +  +
Sbjct: 415 ALVKV 419


>gi|77359501|ref|YP_339076.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas haloplanktis TAC125]
 gi|115305795|sp|Q3ILJ9|SYY2_PSEHT RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|76874412|emb|CAI85633.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas haloplanktis TAC125]
          Length = 399

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 183/413 (44%), Gaps = 24/413 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     ++ L S   +    G+D TA  LH GH   +  +   Q  GH
Sbjct: 7   LAEIK-RGTEEILIEDELVEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKMKTFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + + L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +          +  N
Sbjct: 66  EVVFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPA----KTTVAFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TW+ ++     + ++ +  +V RML  +  + R    QS++  EF Y ++Q +D V L 
Sbjct: 122 STWMENLGA-AGMIKLAARQTVARMLERDDFKKRYASGQSIAIHEFLYPLVQGWDSVAL- 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +         + +PLL  T    KM K+L   I +
Sbjct: 180 ---EADVELGGTDQRFNLLMGRELQKDEGQKPQTVIMTPLLEGTDGVQKMSKSLGNYIGI 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+ L ++ I+   +   QG    + K  +A E
Sbjct: 237 T---DAPNDMFGKIMSISDVLMWRYYDLLSGLSIAGINAQKERVEQGTNPRDIKIELAKE 293

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H   +A+ A    ++ F        +P ++++ ++    + +  L+ +A    ST
Sbjct: 294 LIARFHSEADAQAAHDDFIQRFQKKALPDEIPELTVTIEQ--DSILIANLLKEANLVAST 351

Query: 366 NEARRHLKSNAIKINNS-IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R +K  A+K+N    I++ KL+I               GK+      + 
Sbjct: 352 SEAMRMIKQGAVKLNGEDKITDTKLEIA-----KGSTAIYQVGKRKFANITVA 399


>gi|300819606|ref|ZP_07099799.1| tyrosyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300527854|gb|EFK48916.1| tyrosyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 358

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 135/345 (39%), Positives = 199/345 (57%), Gaps = 5/345 (1%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G+  A+  NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
              + ++A ++T +VHG E  + A       F  S+ +       
Sbjct: 301 PRGQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFE 345


>gi|323699892|ref|ZP_08111804.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459824|gb|EGB15689.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 424

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 219/421 (52%), Gaps = 18/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            ++ L  RG I  +++   +           Y G+D TA SLH G+L  L  L  +Q+ G
Sbjct: 2   LMNELEWRGNIQDMTDAEGIARFLGTRGNGVYAGFDPTAESLHVGNLLVLTTLVRMQRCG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            +PI L+GG T +IGDPS +D  R+++ +  +    E I G   +F++  TG T  ++ N
Sbjct: 62  LRPIFLLGGATGMIGDPSGKDVERQLIDTTTVAAQAEMIGGQIEAFVRRNTG-TAPVLRN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W   I  ++ LR++G  FSVN ML+ ESVR R+ RE + +S+ EF+YM+LQ++DF+ 
Sbjct: 121 NYHWFKDINTMEFLRDVGKHFSVNAMLNKESVRGRIDREGEGISYTEFSYMLLQSFDFLH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   CR+Q+GGSDQWGNI  GIDL  R    + F +T PLLTTASG K GK+   A++
Sbjct: 181 LFREEGCRMQIGGSDQWGNITSGIDLIRRAAGGRAFGITLPLLTTASGRKFGKSEGNAVF 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           LN E T  Y+F Q+W N +D D + F K  T L  + I  +     +   + EA++ +A 
Sbjct: 241 LNAEKTPVYHFHQFWLNTEDRDAIRFLKLFTFLDRTVIAELEAAVEERPHLREAQRRLAD 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T MVHGR   +    AA   F                    P++ +          L 
Sbjct: 301 EVTCMVHGRTALDAVVGAAQALFGDGDLRAVDMAALRGAVSAAPSLVLGH---GVPTDLC 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +L+V  G A S  +ARR  +   + +NN  + +        DF     + +  G+K H +
Sbjct: 358 SLLVGLGMAQSRGQARRDAQGGGVYVNNRRVRDAAFVPTDADFLDGEMLIVRKGRKIHGV 417

Query: 414 C 414
            
Sbjct: 418 V 418


>gi|28899244|ref|NP_798849.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362167|ref|ZP_05775157.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260879062|ref|ZP_05891417.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895937|ref|ZP_05904433.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260900668|ref|ZP_05909063.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|81726996|sp|Q87LY8|SYY2_VIBPA RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|28807468|dbj|BAC60733.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308085376|gb|EFO35071.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308089604|gb|EFO39299.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308110889|gb|EFO48429.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308111058|gb|EFO48598.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474221|gb|EGF45026.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 395

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 171/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI++        K   +
Sbjct: 230 SAGNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIEQFKADVQAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGTPVANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R +K  A K+    +++ K   +       G      GK+      +
Sbjct: 342 DAGLCASTSEAMRMVKQGAAKVEGEKVADAKFAPEA------GTYVFQVGKRKFARITI 394


>gi|332304971|ref|YP_004432822.1| tyrosyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172300|gb|AEE21554.1| tyrosyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 399

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 101/419 (24%), Positives = 177/419 (42%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++S F + L  RG    +     +  L     +    G+D TA  LH GH   +  L
Sbjct: 1   MADWQSAF-AELQ-RGAEEILLEEELIAKLKEGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RAFQKLGHEVIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   +  N  W+  +     + ++ S  +V RML  +  + R    Q ++  EF Y ++Q
Sbjct: 115 SKTTIRFNSEWMEELGA-SGMIKLASSQTVARMLERDDFKKRYANGQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L       +++GG+DQ  N++ G +L +         L +PLL       KM K
Sbjct: 174 GWDSVALK----SDVELGGTDQRFNLLMGRELQKGQGQRPQTVLMTPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I +     SP + +    +I D  +  +   L+   + EI +  +         +
Sbjct: 230 SLGNYIGIT---DSPSDMFGKIMSISDDLMWRYYDLLSFKAIEEIAQYKEQVAAGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    A+ A    ++ F  +     MP  +    E   GM +  L+ 
Sbjct: 287 IKIALAKEIIARFHDEAAADAAHHEFVQRFQKNAIPDEMPEFTFEAGE--EGMAVANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A+K++   ++++K       F S        GK+      L
Sbjct: 345 EAGLVASTSEAMRMVKQGAVKMDGEKVADQKTT-----FRSLEQAVFQVGKRKFARVTL 398


>gi|195489803|ref|XP_002092892.1| GE11414 [Drosophila yakuba]
 gi|194178993|gb|EDW92604.1| GE11414 [Drosophila yakuba]
          Length = 464

 Score =  312 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 130/439 (29%), Positives = 218/439 (49%), Gaps = 29/439 (6%)

Query: 5   KSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I   +    +  L + G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QKNLL-ELTDRGFFQGIFPDTAAPRMKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GHKPI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHKPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K+ +      ++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +S
Sbjct: 144 WDSKKHKSPLPPLTIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---SQHMPTI----- 339
                 E  +A+ ++A ++T +VHG    ++A       +   +      ++P I     
Sbjct: 324 EHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGKVEGLAELNLPEIQQTFQ 383

Query: 340 --SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
             ++       GM +L L +KA    +  +A R + +    +N   + N    +      
Sbjct: 384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHI 443

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GK+N  I  
Sbjct: 444 LRNGISLLRVGKRNFYIVR 462


>gi|53804945|ref|YP_113252.1| tyrosyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81682669|sp|Q60AU5|SYY_METCA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53758706|gb|AAU92997.1| tyrosyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 397

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/415 (24%), Positives = 169/415 (40%), Gaps = 23/415 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D ++ L  RG    +        + S   +    G+D TA  LH GH   L  L   Q
Sbjct: 1   MNDVITQLL-RGTHEVLRLEELQKRIESGKPLRIKAGFDPTAPDLHLGHTVLLNKLKQFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I L+G  T +IGDP+ ++ +RR +   E+ EN +  +      +         L
Sbjct: 60  DLGHETIFLIGDFTGMIGDPTGKNVTRRPLTRDEVIENAKTYEEQIYKVL----CPERTL 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++ N +W+ +      L ++ +  +V RML  +    R    Q +S  EF Y ++Q YD 
Sbjct: 116 VMFNSSWM-NAMTSADLIQLAAKHTVARMLERDDFAKRYAGGQPISIHEFLYPLIQGYDS 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSG 243
           V L       +++GG+DQ  N++ G  L E         +T P+L    G  KM K+L  
Sbjct: 175 VALK----ADVELGGADQKFNLLVGRHLQEIYGQTPQVVMTMPILEGLDGIQKMSKSLGN 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            I +      P + +    +I D  +  +   L+  P++E+ R      +G    + K  
Sbjct: 231 YIGIA---DPPDDMFGKIMSISDDLMWRYYDLLSFAPLAEVARWRRECSEGANPRDVKVR 287

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +  EI    HG   A KA          +     +    I+  +   G  +  L+     
Sbjct: 288 LGQEIVERFHGASAARKALENFEARHRDNAVPDDLVEQVIAVPD--GGYPIANLVHDLAL 345

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             ST+EA R +K   IKI+   + + K ++        G   +  GK+      L
Sbjct: 346 TASTSEALRLIKQGGIKIDGERLEDPKCRMTA-----GGTHIIQVGKRKFAKIRL 395


>gi|269103471|ref|ZP_06156168.1| tyrosyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163369|gb|EEZ41865.1| tyrosyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 395

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MATIEQALAEI--KRGVDELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVTFLIGDFTGMVGDPTGKNVTRPPLTREQVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +   + +  + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 116 -KTKIEFNSSWLSELGA-EGMIRLASNQTVARMLERDDFKKRYGENRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +       +++GG+DQ  N++ G ++ +         LT PLL       KM K
Sbjct: 174 GYDSVAMK----TDVELGGTDQKFNLLMGREMQKSYGQKPQVILTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +     +P   +    +I D  + S+ + L+  P+ E+ +  +         +
Sbjct: 230 SAHNYIGVA---DAPSEMFGKIMSISDDLMWSYFELLSFRPLEELAQFKQDVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + M      + E   GM +  L+ 
Sbjct: 287 VKFLLAKEIIARFHSEADADAAEQEFISRFQKGNMPEEM-----PEFEFEAGMPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A    ST++A R ++  A+KI+   + + KL          G      GK+      L
Sbjct: 342 DAELVNSTSDAMRMIRQGAVKIDGEKVEDTKLTPAA------GTAVYQVGKRKFARVTL 394


>gi|292491224|ref|YP_003526663.1| tyrosyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579819|gb|ADE14276.1| tyrosyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 405

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +  F  IL  RG    +        L     +    G+D TA  LH GH   L  L
Sbjct: 1   MASPQQVFDEIL--RGTEEILLAEELKLRLEQGKTLRVKAGFDPTAPELHLGHTVLLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK GH+ + L+G  T +IGDP+ ++ +R+ +   E+ EN    +      +      
Sbjct: 59  RQFQKLGHEALFLIGDFTGMIGDPTGKNITRQPLTRDEVLENARTYEEQIFKILDP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              L++ N +W+  +     L  + S ++V RML  +    R +  Q ++  EF Y +LQ
Sbjct: 115 EKTLVVFNSSWMNGMTA-ADLVRLSSHYTVARMLERDDFYKRYQSGQPIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G DL +         +T P+L       KM K
Sbjct: 174 GYDSVALK----ADVELGGTDQKFNLLVGRDLQKVYGQRPQVIITMPILEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +L   I +N+    P   +    +I D  +  + + L+  PM+EI        QG    +
Sbjct: 230 SLGNYIGINEP---PREMFGKLMSISDELMWRYLELLSFRPMTEIAHWKKEVEQGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE+A    +  F   +  + +  I IS      G+ +  L+ 
Sbjct: 287 IKIKLAKEIVARFHSDGMAEQAHEVFVAQFRQGVLPEDISEIPISTG--KEGIPIARLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++   TST+EA R +K  A++I+   I N+ LQ+            +  GK+      +
Sbjct: 345 ESALTTSTSEALRMIKQGAVRIDGERIENQSLQL-----LPGITCVVQVGKRRFARVSI 398


>gi|21672404|ref|NP_660471.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009419|sp|Q8KA14|SYY_BUCAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21623012|gb|AAM67682.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 422

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 150/417 (35%), Positives = 227/417 (54%), Gaps = 9/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L +R  I  I+N  +L  L     ++ Y G+D T  SLH GHL  L+ L   Q  
Sbjct: 2   DLINELHQRNLIFHITNENKLKELIKNKYISLYCGFDPTEDSLHVGHLLPLITLKRFQVL 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI L+GG TS+IGDPSF+ + R +     +++   KI    S F+ + +    A++L
Sbjct: 62  GHKPIVLIGGATSLIGDPSFKTKERLLKSDSFVEKCTLKISQQISFFLDFNSNFNSAIIL 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W   I  +  LR++G +FSVN +++ E+V+ R+KR +Q +SF EF+Y +LQAYDF 
Sbjct: 122 NNNLWFKKINILQFLRDVGKYFSVNALINREAVKKRIKRSDQGISFTEFSYNLLQAYDFF 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +     LQ+GGSDQWGNI  G+ L  R+   + + LT PLL  ++G K GKT SG +
Sbjct: 182 ILNQKNQVSLQIGGSDQWGNISSGMHLIHRISKKEAYGLTLPLLMQSNGIKFGKTESGTV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + T+PY F+Q+W NI+D++V  F K  T + + EI+   K   +  +I   K ++A
Sbjct: 242 WLDPQKTTPYRFYQFWMNIEDSNVYRFLKLFTFIDIHEINEREKNSYKKNQIVSDKVLLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T +VHG E+   A       F  +I+   +  +       +   E  +   L   +V
Sbjct: 302 KHMTRLVHGDEKLSAAERITNILFFKNINDIQISDLEQLRKDGVPVVETYKIKDLQEALV 361

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +  A S  +A+  + SN+I IN   I N+   I   D        LS GKKNH + 
Sbjct: 362 LSSLAQSRTQAKNMIISNSISINTKKIVNKNYIIDDNDKLFNQFTLLSRGKKNHCLI 418


>gi|212213297|ref|YP_002304233.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011707|gb|ACJ19088.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 399

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 185/414 (44%), Gaps = 23/414 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +          + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTREIVMENTKTYETQAFRILDPD----KTQVT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  D L  + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKA-DDLVRLAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LK----ADVELGGTDQKFNLLVGRELQKHFGQRPQSVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R      +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +T+E  R +   A++I+   + + KL I         +     GK+      + 
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIPR-----GESHLFQVGKRRFAKVKVI 399


>gi|148263175|ref|YP_001229881.1| tyrosyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146396675|gb|ABQ25308.1| tyrosyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 403

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 184/412 (44%), Gaps = 27/412 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  +     ++ L     +   +    G+D TA  LH GH   L  +   Q+ 
Sbjct: 8   EIIKRGAMEILLEKELIEKLEKSLKTGVPLKIKAGFDPTAPDLHFGHTVLLHKMRQFQQL 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +          ++
Sbjct: 68  GHEIYFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDP----EKTKVV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +   D++  + S ++V RML  E   +R   +  +S  EF Y ++Q YD V 
Sbjct: 124 FNSEWLGKLTASDMIG-LASKYTVARMLEREDFSNRFSNQLPISIHEFMYPLVQGYDSVA 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L      P    +T PLL       KM K+L   I
Sbjct: 183 LK----ADVELGGTDQKFNLLVGRELQREWGQPPQTVITMPLLEGLDGVNKMSKSLGNYI 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            +N+        +    +I D  +  + + L+ + ++E++++            E KK +
Sbjct: 239 GINEPAD---EIFGKIMSISDELMFRYYELLSDMSLAELEQLKGDLKNGAAHPMEVKKRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
             E+ +  HG + A++A    ++ F  +     M +I++S       + L  ++  AG  
Sbjct: 296 GREMVSRYHGNKAADEAEANFVKRFRDNQMPDEMISITLSAA--GEKILLGKVLAGAGLV 353

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S +E RR ++   +K+N   I+++ L++        G   L  GK+     
Sbjct: 354 KSNSEGRRAIQQGGVKVNGEKITDDNLELVCM-----GEYVLQVGKRRFAKV 400


>gi|325191257|emb|CCA26043.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 421

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 137/396 (34%), Positives = 212/396 (53%), Gaps = 11/396 (2%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               + Y G+D TASSLH G+L Q + L   Q +G++PI L+GG T +IGDPS R + R 
Sbjct: 23  SNSPSIYCGFDPTASSLHIGNLLQAIALRHFQLSGYRPILLIGGATGMIGDPSGRAQERS 82

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++    +Q N + +    S+ +      T A++LNN  W   +  +D +R +G  F +N+
Sbjct: 83  LLSDAMVQSNAKSLLNGLSNVLDLSGSTTGAIVLNNADWHGKMTVMDWMRHVGRHFRINK 142

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E+V+ RL+ E  +SFLEF+Y + QAYDF+ L + YDC  Q+GGSDQWGNI+ G DL
Sbjct: 143 MLARENVKRRLESENGISFLEFSYQLFQAYDFLHLYRQYDCHAQLGGSDQWGNIVGGCDL 202

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
            ++    + F LT PLL T SG K GK+   A+WL+ + TS + F+QY+  + D DV + 
Sbjct: 203 IKKSTGKEAFGLTLPLLKTVSGEKYGKSAGNALWLDSKKTSVFEFYQYFLRVQDCDVENH 262

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  T + + EI R+     K      A+K++A  +T M+HG +  +KA  A    F  +
Sbjct: 263 LKCFTFMELDEIHRIVLEHAKYPEKRLAQKMLADSVTRMIHGEDGLKKAKRATTALFSEN 322

Query: 331 IHSQHMPTIS---------ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           I       I          + + E      L+ ++V  G   S  EARR +    + +NN
Sbjct: 323 ISQLESSDIEELVRHAPVHMKRYEEIVQQHLVDVMVATGICKSKAEARRLILGGGVYVNN 382

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + I +    I+      TG + +  GK+N  +  + 
Sbjct: 383 TRIRDGNHMIQSDQVIGTGFVLIRTGKRNSHLLKIA 418


>gi|161831069|ref|YP_001596140.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|161762936|gb|ABX78578.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 399

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 185/414 (44%), Gaps = 23/414 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +          + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTCEIVMENTKTYETQAFRILDPD----KTQVT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  D L  + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKA-DDLVRLAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LK----ADVELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R      +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +T+E  R +   A++I+   + + KL I         +     GK+      + 
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIPR-----GESHLFQVGKRRFAKVKVI 399


>gi|297171491|gb|ADI22491.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_07A21]
          Length = 401

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 177/407 (43%), Gaps = 22/407 (5%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             RG    +     ++ L +   +   +G+D TA  LH GH   +  +   Q  GH+ I 
Sbjct: 13  IRRGAEEILVEAELIERLETGKPLRVKVGFDPTAPDLHLGHTVLINKMRQFQDLGHEIIF 72

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T +IGDPS ++ +R  +  +EI +N    K      +          +++  +  
Sbjct: 73  LIGDFTGMIGDPSGKNATRPALSPEEIDQNALTYKEQVFKILDPDK-----TIVDFNSRW 127

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            +    + +  + S ++V RML  +   +R +  Q ++  EF Y ++Q YD V L     
Sbjct: 128 GNELGAEGMIRLASRYTVARMLERDDFSTRYRDSQPIAVHEFLYPLMQGYDSVALK---- 183

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G +L ++        LT PLL       KM K+L  ++ + +  
Sbjct: 184 ADVELGGTDQKFNLLVGRELQKQYGLEPQIVLTVPLLEGLDGVQKMSKSLGNSVGITE-- 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTM 309
            SP   +    +I D  +  + + L+  P+++I   +     G    + K  +A EI   
Sbjct: 242 -SPVEMYGKLMSISDELMWRYFELLSFRPLTDIRGLQEEVAAGANPRDIKFQLAHEIVER 300

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H   +A KA  + +  F        +  + +  D   + M +  +I  AG A ST+E  
Sbjct: 301 FHSPSDAVKAHQSFVSQFQRGEIPDDIAEVDV--DNQGKDMQVANVIKSAGLAGSTSEVY 358

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R +   A++I+   +++ KL IK        ++    GK+      +
Sbjct: 359 RLMAQGAVRIDGERVNDRKLTIKT-----GVSVLFQVGKRRFARIRV 400


>gi|195353270|ref|XP_002043128.1| GM11790 [Drosophila sechellia]
 gi|194127216|gb|EDW49259.1| GM11790 [Drosophila sechellia]
          Length = 464

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 128/439 (29%), Positives = 218/439 (49%), Gaps = 29/439 (6%)

Query: 5   KSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I   +    +  L + G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QKNLL-ELTDRGFFQGIFPDTAAPRMKQLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SR++ E  +S
Sbjct: 144 WDSKKQKFPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRMESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDCNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTI----- 339
              +E    +A+ ++A ++T +VHG    ++A       +      +   ++P I     
Sbjct: 324 EHTREPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAQLNLPEIQQTFQ 383

Query: 340 --SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
             ++       GM +L L +KA    +  +A R + +    +N   + N    +      
Sbjct: 384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHI 443

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GK+N  I  
Sbjct: 444 LRNGISLLRVGKRNFYIVR 462


>gi|307107938|gb|EFN56179.1| hypothetical protein CHLNCDRAFT_48743 [Chlorella variabilis]
          Length = 440

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 135/426 (31%), Positives = 219/426 (51%), Gaps = 39/426 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L  RG +  +++P  L  + +Q  + AY G+D TA SLH G+L  +++L W Q+ 
Sbjct: 39  DVVAALRSRGLLQDVTSPD-LAAVSTQEQLLAYCGFDPTAESLHLGNLLGIIVLAWFQRC 97

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDAL 124
           GH+P++L+GG T  +GDPS +   R ++  + I+ N+  I+    + ++   G+G  + L
Sbjct: 98  GHRPVALLGGATGRVGDPSGKSAERPVLSEKVIERNVAGIERTLRTLLQPPPGSGLPEPL 157

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W   +  +  LREIG +  V  ML+ ESVR R++ +  +S+ EF Y +LQ YDF
Sbjct: 158 VLNNLDWFGGMGLLTFLREIGKYARVGTMLAKESVRKRMESDTGISYTEFTYQLLQGYDF 217

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V + + Y  R+Q                         F LT PLL  A G+K GK+ SGA
Sbjct: 218 VHMRRQYGVRVQ----------------------EPCFGLTFPLLLKADGSKFGKSESGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKI 301
           +WLN +M SPY F+Q+     DADV+ F + LT LP+ EI+      +  G   N A++ 
Sbjct: 256 LWLNGDMMSPYQFYQFLFKTADADVLKFLRMLTFLPLEEIEALGASMQSPGYVANTAQRR 315

Query: 302 IATEITTMVHGREEAEKAATAAM----------ECFDMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T  VHG E   +A  A            +   +   +   P+ S+ +D+V  G  
Sbjct: 316 LAEEVTRFVHGEEGLRQALKATEALAPGAATKLDADSLEAAAGDAPSASLPRDQV-VGAP 374

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  ++V  G   S    RR +K   +++NN  + +E   +   D      + ++ GKKN 
Sbjct: 375 LADVMVAVGMQPSKAAVRRMIKGGGVRVNNEKVDDELAALGEDDLIDGRLVLIAAGKKNK 434

Query: 412 IICHLC 417
           ++  + 
Sbjct: 435 MLVRVA 440


>gi|125809705|ref|XP_001361216.1| GA14214 [Drosophila pseudoobscura pseudoobscura]
 gi|54636391|gb|EAL25794.1| GA14214 [Drosophila pseudoobscura pseudoobscura]
          Length = 464

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 128/438 (29%), Positives = 214/438 (48%), Gaps = 29/438 (6%)

Query: 6   SDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            + L  L++RGF   I   +   ++  L + G  + Y G+D TA SLH G+L  +M L  
Sbjct: 26  KNLL-ELTDRGFFQGIFPDTAAPKIKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLLH 84

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI----FSSFIKYGT 118
            Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+      F +  K   
Sbjct: 85  CQRAGHRPIALVGGATGLIGDPSGRKTERNQLGESIIESNLKAIEQQLTRVFENHEKCLW 144

Query: 119 GKTDALM-------LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                         +NN  W  ++  ID +  +G  F +  MLS  SV+SRL+ E  +SF
Sbjct: 145 DNRKNSTPLQPLTIVNNAEWYANLHLIDFIANMGRHFRMGSMLSRSSVQSRLESEDGMSF 204

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLT 230
            EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F +T P++T
Sbjct: 205 TEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGMTLPIVT 264

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
              G K GK+   A+WL++  TSP+  +Q++  + D++     K  T +P++EI+++ + 
Sbjct: 265 NEEGDKFGKSAGNAVWLDENKTSPFALYQFFLRMPDSEAEKLLKLFTFIPLTEIEQLMQE 324

Query: 291 Q--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKD--- 344
                E  +A+ ++A ++T +VHG    ++A       +   +     +    I +    
Sbjct: 325 HEKEPEKRKAQTLLAEDVTLLVHGENGLKQAERVTNALYKGKVDGLAELNYAEIKQTFQG 384

Query: 345 ------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFD 397
                     GM +L L +KA    +  +A R + +    +N   + N    I       
Sbjct: 385 AAVVDLLTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVITAGIHIL 444

Query: 398 STGNIKLSFGKKNHIICH 415
             G   L  GK+N  I  
Sbjct: 445 RNGVSLLRVGKRNFYIVR 462


>gi|229512527|ref|ZP_04401998.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350420|gb|EEO15369.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 434

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 143/426 (33%), Positives = 216/426 (50%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAM-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGRPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F              +    +P ++ S  +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELSQLELDGLPCVAASSPDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|153802596|ref|ZP_01957182.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121859|gb|EAY40602.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 434

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 143/426 (33%), Positives = 216/426 (50%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAM-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGRPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F              +    +P ++ S  +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELSQLELDGLPCVAASSTDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|295096027|emb|CBK85117.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 380

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 135/345 (39%), Positives = 195/345 (56%), Gaps = 5/345 (1%)

Query: 1   MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MENLMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  
Sbjct: 61  CLKRFQMAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
           G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y 
Sbjct: 121 GDNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFACLNKLHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             A+ ++A E+T +VHG E    A       F+ ++         
Sbjct: 301 PRAQYVLADEVTKLVHGEEGLAAAKRITASLFNGTLSDLSEADFE 345


>gi|153826579|ref|ZP_01979246.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739671|gb|EDM53885.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 434

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 143/432 (33%), Positives = 213/432 (49%), Gaps = 35/432 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L           Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFVT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    + + +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID   ++G  FSVN M++ ESV+ RL + +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFHDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESRKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T  VHG E    A       F   +    +    +++ E+  G+  +        A 
Sbjct: 313 EHVTRFVHGEEGLAAALRITQALFSGDVSYLSL--SELAQLEL-DGLPCV--------AA 361

Query: 364 S-----------------TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S                   +AR  L++ AI++N   +  E                L  
Sbjct: 362 SRTDSLLDLLLSSGLASSKRQAREWLENGAIRVNGERVQQEGGL--SGFALFDRYYVLQR 419

Query: 407 GKKNHIICHLCG 418
           GKK   +  L G
Sbjct: 420 GKKQFALIKLEG 431


>gi|289547924|ref|YP_003472912.1| tyrosyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181541|gb|ADC88785.1| tyrosyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 394

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 170/405 (41%), Gaps = 23/405 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG +  I        L     +    G+D TA  LH GH+  L  L   Q  GH+  
Sbjct: 10  IIKRGTVEIIEEEELRKKLAEGRPLRIKAGFDPTAPDLHLGHVVLLNKLRQFQDLGHEVY 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDP+ R+E R  +  +E+ EN +  +      +          ++ N +W
Sbjct: 70  FVIGDFTAMIGDPTGRNEVRPPLSREEVLENAKTYEHQVFKVLDPQ----KTNVVFNSSW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   + + ++ + ++V RML  +    R K    +   EF Y +LQ YD V L    
Sbjct: 126 ITPLGT-EGIIKLSAHYTVARMLERDDFSRRFKEGIPIYIHEFIYPLLQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL           +T PLL       KM K+    + L ++
Sbjct: 182 -ADVELGGTDQKFNLLVGRDLQRAYGQEPQVCITLPLLVGLDGVRKMSKSYRNYVGLQED 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P + +    +I D  +  +   LT   + E +     +     +AKK +A  I    
Sbjct: 241 ---PDSMFGKIMSISDQLMWEYYTLLTD--IEEEEIKNMKEKWHPADAKKRLAHYIVERF 295

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG+E A+KA +     F      +  P + +      +      L+   G   S N ARR
Sbjct: 296 HGKEAADKALSNFERTFSRKEFPEDAPVLELPMGYRQKAF---ELLYSLGIENSKNSARR 352

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ++   ++IN   I +   +I++ +      ++L  GKK      
Sbjct: 353 VIEGGGLRINGRRIEDPNEEIEVTE-----ELRLQVGKKRFFRIK 392


>gi|91774420|ref|YP_544176.1| tyrosyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91708407|gb|ABE48335.1| tyrosyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 399

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 175/409 (42%), Gaps = 23/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    I     +D L +   +    G+D TA  LH GH   L  L   Q  GHK +
Sbjct: 10  LIKRGIDDLIGEQELIDKLNTGQPLKVKAGFDPTAPDLHLGHAVLLNKLRQFQDLGHKVL 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  + ++++Q N    +      +K         ++ N +W
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLSAEQVQVNARTYQEQVFKILKP----EQTEVVFNSSW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +    +L+   +  +V RML  +    R K  Q ++  EF Y +LQ YD V L    
Sbjct: 126 INELGAAGMLKLAATH-TVARMLERDDFEKRYKNNQPIAIHEFLYPLLQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L +         LT PLL       KM K+L   I + + 
Sbjct: 182 -ADIELGGTDQRFNLLMGRELQKHFGQLPQSVLTVPLLEGLDGVNKMSKSLGNYIGIAEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
             + ++      ++ D  +  +   L+   M  I+R   +   G+     K   A EI T
Sbjct: 241 ANTIFS---KLMSVSDELMWRYITLLSFESMETIERWRASVQAGENPRNIKVRFAQEIVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG++ A  A              +++P +++   E +  + +  L+ +AG   ST+EA
Sbjct: 298 RFHGKQAAVDALADFEL-RSKGGIPENVPEVNVVIKEAA--VAIGPLLKQAGLVASTSEA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            R ++   ++++   + +  LQ+          +    GK+      + 
Sbjct: 355 FRMIEQGGVRLDGEKVMDRGLQVA-----QGAVVVAQVGKRKFARITIS 398


>gi|308271963|emb|CBX28571.1| Tyrosyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 436

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 176/421 (41%), Positives = 243/421 (57%), Gaps = 21/421 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +D ++I  ERGFI + ++  EL        +T YIG+D TASSLH G L  +M L  +Q
Sbjct: 8   MADLINIFEERGFIEKTTHDEELKDYIRNNKITCYIGFDPTASSLHVGSLIPIMALAHMQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+L+GGGT +IGDPS + E R+++  + I+ N+  IK   S FI +      AL
Sbjct: 68  KNGHRPIALIGGGTGLIGDPSGKTEMRKLLNPEMIEANLSGIKKQLSRFIDF--SDNKAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  +KYI  LR+IG  FSVNRM+  ES + RL  E+ L+F+EFNYM+LQAYDF
Sbjct: 126 LVNNNEWLSELKYIPFLRDIGKCFSVNRMIKAESYKLRLDSEEGLNFIEFNYMLLQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL   Y CRLQMGGSDQWGNI+ GI+L  ++K    F +T PL+ T++G KMGKT  GA
Sbjct: 186 LELFDKYKCRLQMGGSDQWGNIVAGIELIRKVKKDISFGITFPLIKTSNGAKMGKTAKGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ + TSPY+++QYW N DD DV  F    T LP+ EI  + KL+G ++N AK ++A 
Sbjct: 246 VWLDSDRTSPYDYYQYWINTDDRDVARFLALFTFLPIEEIKDIEKLEGADLNSAKTVLAF 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQH------------------MPTISISKDEV 346
           E T + HGR+EA KA  AA   F      +                   +P   I++D +
Sbjct: 306 ETTLLAHGRDEAVKAYQAAASVFGERFVPEDYLMHSTVPRNSSKAEDISVPCSYINQDVL 365

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             G+    L  +A    S   ARR ++     +N+  I      I   D      I L  
Sbjct: 366 KLGIPAFKLFHEAKLTVSGAAARRLIEQGGAYVNDRRIEMFDEMITSNDIMHM-EILLRS 424

Query: 407 G 407
           G
Sbjct: 425 G 425


>gi|304409332|ref|ZP_07390952.1| tyrosyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307303690|ref|ZP_07583443.1| tyrosyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351850|gb|EFM16248.1| tyrosyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912588|gb|EFN43011.1| tyrosyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 397

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 95/418 (22%), Positives = 174/418 (41%), Gaps = 26/418 (6%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPV----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALQ----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++  +         + K
Sbjct: 232 HNYIGVSEPANEMF---GKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI T  H    A+ A  A ++     +    +  I +   E   G+ +  L+  A
Sbjct: 289 IALAKEIITRFHDEASAQSAHQAFVD-RAKGMIPDDIGEIELVAGE---GLAIANLLKDA 344

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               ST+EA R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 345 DLVASTSEAMRMIKQGAVKMDGEKLDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 397


>gi|269961967|ref|ZP_06176322.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833290|gb|EEZ87394.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 395

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI +        K   +
Sbjct: 230 SSGNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFEAGTPVANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI    +++ K   +       G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIEGEKVADAKFAPEA------GTYVFQVGKRKFARITI 394


>gi|304558971|gb|ADM41635.1| Tyrosyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 376

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 131/373 (35%), Positives = 199/373 (53%), Gaps = 9/373 (2%)

Query: 51  AGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF 110
            GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   
Sbjct: 1   MGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKATERKLNTEETVQSWVDKIRRQV 60

Query: 111 SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSL 169
           + F+ +  G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +
Sbjct: 61  APFLDFDCGSNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGI 120

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           SF EF+Y +LQ YDF  L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+
Sbjct: 121 SFTEFSYNLLQGYDFASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLI 180

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RM 287
           T A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+    
Sbjct: 181 TKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALED 240

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISI 341
                 +   A+ ++A  +T +VHG    E A       F  S+          +    +
Sbjct: 241 EDKNSGKAPRAQYVLAEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGM 300

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              E+ +G  L   +V A    S  +AR+ + SNA+ +N    S+ +      D      
Sbjct: 301 PMVEMDKGADLQQALVDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFGRY 360

Query: 402 IKLSFGKKNHIIC 414
             L  GKKN+ + 
Sbjct: 361 TLLRRGKKNYCLI 373


>gi|120599833|ref|YP_964407.1| tyrosyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146292231|ref|YP_001182655.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|120559926|gb|ABM25853.1| tyrosyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145563921|gb|ABP74856.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|319425531|gb|ADV53605.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 397

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/418 (22%), Positives = 176/418 (42%), Gaps = 26/418 (6%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALK----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++  +         + K
Sbjct: 232 HNYIGVSEPANEMF---GKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVVNGANPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI T  H    AE A  A ++     +    +  I ++  E   G+ +  L+  A
Sbjct: 289 IALAKEIITRFHDAASAESAHQAFVD-RAKGMIPDDIEAIELAAGE---GIAIANLLKDA 344

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               ST+EA R +K  A+K++   + + ++ +      +        GK+      L 
Sbjct: 345 DLVASTSEAMRMIKQGAVKMDGEKLEDSRMTL-----FAGTVAVFQVGKRKFAKVTLV 397


>gi|153840518|ref|ZP_01993185.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149745819|gb|EDM56949.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 395

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKESRPLRIKLGADPTAPDIHIGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  ++ + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDNFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI++        K   +
Sbjct: 230 SAGNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIEQFKADVQAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGTPVANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R +K  A K+    +++ K   +       G      GK+      +
Sbjct: 342 DAGLCASTSEAMRMVKQGAAKVEGEKVADAKFAPEA------GTYVFQVGKRKFARITI 394


>gi|88608544|ref|YP_506234.1| tyrosyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600713|gb|ABD46181.1| tyrosyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 391

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 170/407 (41%), Positives = 255/407 (62%), Gaps = 20/407 (4%)

Query: 9   LSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I+ ERG+  Q ++   L+    S   +  Y+G+D TAS++H GHL  LML+  ++  G
Sbjct: 2   LKIIEERGYFFQCTDREALEHRLHSGEKLVFYLGFDCTASAIHLGHLVPLMLMRLVKSYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+GGGT++IGDPS +D+SR+++  +EI  N++ I  I    +       D   +N
Sbjct: 62  HEVIILLGGGTTLIGDPSGKDKSRKILSREEINRNVDTISKIVKRVV------GDVRFVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I+YID LR +G  FS+NRML+F+SV+SRL RE  LSFLEF+YMILQAYDFVEL
Sbjct: 116 NVDWLEDIRYIDFLRNVGRHFSINRMLTFDSVKSRLDRESHLSFLEFSYMILQAYDFVEL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +Q+GG DQWGNI+ G++LG +L+  +LF LT PL+TTASG KMGKT  GA+WL
Sbjct: 176 NRLYNCSVQVGGGDQWGNIVNGVELGRKLRNTQLFGLTVPLITTASGKKMGKTEEGAVWL 235

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++ SP+++WQY+RN +D+DV  F +  T LP+ EI+ ++     +INEAKK++ATE T
Sbjct: 236 DADLYSPHDYWQYFRNTEDSDVERFLRLFTELPIDEIETLSACDDAQINEAKKVLATEAT 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   AE+  + ++           +P I +       G  ++ ++++   A+S  +
Sbjct: 296 RICHGSVIAEEV-STSIIKAFEEDDLSQLPEIRVPH-----GANIIDVVIRIEAASSRTQ 349

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A+R ++S A+KI+   I    L +  Q         +S GKK   I 
Sbjct: 350 AKRLIESGAVKIDKKKILTYNLDLPEQ-------FVVSVGKKQRNII 389


>gi|37680907|ref|NP_935516.1| tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155426|ref|YP_004187805.1| tyrosyl-tRNA synthetase, cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|326423868|ref|NP_760572.2| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81756673|sp|Q7MHZ4|SYY2_VIBVY RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|37199657|dbj|BAC95487.1| Tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319930738|gb|ADV85602.1| tyrosyl-tRNA synthetase cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|319999241|gb|AAO10099.2| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 395

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 93/420 (22%), Positives = 172/420 (40%), Gaps = 28/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQDLGHDVTFLIGDFTGMVGDPTGKNSTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I +++    P   +    +I D  + S+ + L+  P+ E+ +        K   +
Sbjct: 230 SANNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEELAQFKADVAAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP  +      + G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEFT-----FAAGTPMANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +A   +ST+EA R +K  A K++   + + K +  +      G      GK+      + 
Sbjct: 342 EAELCSSTSEAMRMVKQGAAKMDGEKVEDAKAEPAV------GTYVFQVGKRKFARITIA 395


>gi|262274957|ref|ZP_06052768.1| tyrosyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221520|gb|EEY72834.1| tyrosyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 395

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 99/420 (23%), Positives = 182/420 (43%), Gaps = 28/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   +  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVIMNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T+++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQELGHEVIFLIGDYTAMVGDPSGKNTTRPPLTREQVLANAETYKEQIFKILDP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +   D +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 115 NKTRVEFNSSWLGELGT-DGMIRLAASSTVARMLERDDFKKRYSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L ++   P+   +T PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKQNGQPQQVVITMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           + +  I ++    +P   +    +I D  + ++ + L+  P+ EI+  +     G+   +
Sbjct: 230 SANNYIGIS---DAPNEMFGKIMSISDDLMWNYYELLSFRPLEEIEGLKQEIANGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  S      ++G+ +  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADAAEADFINRFQKGAMPDEMPEFS-----FAQGVAIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            A    ST++A R ++  A+KI+   + + KL          G      GK+      L 
Sbjct: 342 DADLVGSTSDAMRMIRQGAVKIDGEKVDDTKLVPAA------GTAVYQVGKRKFARITLA 395


>gi|312884002|ref|ZP_07743719.1| tyrosyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368460|gb|EFP95995.1| tyrosyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 395

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++ +N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDVLKNAETYKEQVFKILDP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 115 NKTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYSGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           + +  I +++    P   +    +I D  +  +   L+  P+SEI   + +  QG+   +
Sbjct: 230 SANNYIGISEA---PSEMFGKIMSISDDLMWDYYDLLSFRPLSEIADLKASIAQGQNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +   + MP  + +      G  +  L+ 
Sbjct: 287 VKVLLAKEIIARFHSEVDADAAEQEFVNRFAKNQIPEEMPEFNFTL-----GTPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG  +ST+EA R +K  A KI+   +++ K   +       G      GK+      +
Sbjct: 342 DAGLCSSTSEAMRMVKQGAAKIDGEKVADAKFTPEQ------GTYVFQVGKRKFARLTI 394


>gi|219681496|ref|YP_002467881.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471177|ref|ZP_05635176.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254783576|sp|B8D8S2|SYY_BUCA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219624339|gb|ACL30494.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 422

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 227/423 (53%), Gaps = 12/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L
Sbjct: 1   MSEF--NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK
Sbjct: 59  KRFQIAGHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A++LNN TW   I  +  LR++G +FSVN M++  +V+ R  + +Q +SF EF+Y +L
Sbjct: 119 NSAVLLNNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GK
Sbjct: 179 QAYDFFILNQQYQVDLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA- 298
           T SG +WL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++ K +  +     
Sbjct: 239 TESGTVWLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNIKNQIIN 298

Query: 299 -KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMG 351
            K ++A  IT +VHG+E+   A       F  +         Q +    I   EVS    
Sbjct: 299 DKSLLAKHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDLQQLKQDGIPFIEVSNVKD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V    A S  +A+  + SN+I IN   I  +      +D        LS GKK H
Sbjct: 359 LQEALVLTSLAQSRTQAKNMIISNSISINTEKIR-KNHIFHEKDKLFGKFTLLSRGKKQH 417

Query: 412 IIC 414
            + 
Sbjct: 418 SLL 420


>gi|157374243|ref|YP_001472843.1| tyrosyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|157316617|gb|ABV35715.1| Tyrosine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 398

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 95/412 (23%), Positives = 170/412 (41%), Gaps = 24/412 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ +  RG    +     L+ L     +   +G D TA  +H GH   L  +   Q+ GH
Sbjct: 8   LAEIK-RGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRTFQELGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          +  N
Sbjct: 67  EVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPA----KTRIEFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ YD V L 
Sbjct: 123 SSWLEPLGA-AGMIRLASKQTVARMMERDDFKKRYGSGQSIAIHEFMYPLLQGYDSVALK 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G +L +         +  PLL       KM K+    I +
Sbjct: 182 ----SDVELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSKSAHNYIGV 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           ++     +       +I D  +  + + L+  P+ EI++            + K  +A E
Sbjct: 238 SEPAGEMF---GKIMSISDELMWRYFELLSFRPLGEIEQFKADVDAGANPRDIKIALAKE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H    A+ A    +  F        +  + I+  E   G+ +  L+ +AG   ST
Sbjct: 295 IIARFHDEAAADAAHQEFINRFQKGAIPTDIQELEIAAGE---GIAIANLLKEAGLVNST 351

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++A R +K  A KI+ + I + +LQ+               GK+      L 
Sbjct: 352 SDAMRMIKQGAAKIDGTKIEDTRLQLSA-----GTTGVFQVGKRKFAKITLV 398


>gi|167627820|ref|YP_001678320.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597821|gb|ABZ87819.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 396

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 177/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  +      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MPTIQQTL--EIIKRGADEVLIEEELVKKLEKNRPLVIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   D+++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 EKTVIRRNGDWFDKMSASDMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I + +   +P + +    +I D  +  + + L+   +  I  + +         +
Sbjct: 230 SSQNYIGIEE---TPNDMFGKVMSISDELMWRYYELLSFKSLDTIANLKQDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A+KI+     + K       F          GK+      +
Sbjct: 342 EAGLVASTSEAIRMIKQGAVKIDGEKAEDNKAI-----FGKGTENVFQVGKRKFAKVII 395


>gi|254372949|ref|ZP_04988438.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570676|gb|EDN36330.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 396

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 177/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKGDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNSVFQVGKRKFAKIII 395


>gi|258515600|ref|YP_003191822.1| tyrosyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779305|gb|ACV63199.1| tyrosyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 406

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 97/425 (22%), Positives = 185/425 (43%), Gaps = 28/425 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQ 56
           M + +      + +RG +  I     +  L +       +   +G D TA  +H GH   
Sbjct: 1   MLSLEKQL--EIIKRGAVEIIPEEELVQKLKNSIETGKPLVIKLGLDPTAPDIHLGHTVV 58

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  +   Q  GHK I ++G  T  IGDP+ + E+R+ +  +E+ EN +  +      +  
Sbjct: 59  LQKMRQFQDLGHKAIIILGDFTGRIGDPTGKSETRKQLTEEEVLENAKTYERQIFKILD- 117

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   ++ N  WL  + + D++  + + ++V RML  +    R +    +S  EF Y
Sbjct: 118 ---AEKTKLVFNSEWLGKLNFADVIE-LSAKYTVARMLERDDFAKRYRENLPISIHEFFY 173

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT 235
            ++Q YD V L    +  +++GG+DQ  N++ G  L +        A+T P++       
Sbjct: 174 PLMQGYDSVAL----EADVELGGTDQKFNLLMGRTLQKEYGQKPQIAITMPIIEGLDGVQ 229

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQG 292
           KM K+L   I +++   SP   +    +I D  +V + + +T +P+ E+       +   
Sbjct: 230 KMSKSLGNYIGVDE---SPREMYGKTMSITDEIMVRYFELVTQVPLEEVRAISEGLQNST 286

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MG 351
               + K  +A EIT + HG+E A +A       F        +P   I +D +  G + 
Sbjct: 287 MHPRDVKMRLAREITAVYHGQEAALQAEEEFKRIFQQGDLPDDIPDFVIKEDGLENGTIR 346

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  L+ +AG  +S +EA+R +    +KI+   + +   +      +      +  GK+  
Sbjct: 347 MDKLLFQAGLTSSASEAKRLISQGGVKIDGHKVEDSLYEYAPVMGN-----IIRVGKRKF 401

Query: 412 IICHL 416
           I   +
Sbjct: 402 IRIIV 406


>gi|297537301|ref|YP_003673070.1| tyrosyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297256648|gb|ADI28493.1| tyrosyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 404

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 101/420 (24%), Positives = 177/420 (42%), Gaps = 25/420 (5%)

Query: 3   AFKSDFLSIL--SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              +D    L   +RG    +     ++ L     +    G+D TA  LH GH   +  L
Sbjct: 5   ELSTDIKQQLAVIKRGADELLIEAELIEKLKKGQPLRIKAGFDPTAPDLHLGHTVLINKL 64

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ + L+G  T +IGDP+ +  +R  + ++++QEN +         +K     
Sbjct: 65  RQFQELGHQVLFLIGDFTGMIGDPTGKSTTRPPLTAEQVQENAKSYTAQVFKILKP---- 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    +L+   S  +V RML  +    R K  Q ++  EF Y +LQ
Sbjct: 121 EQTEVVFNSKWLTELGAAGMLKLAASH-TVARMLERDDFTKRYKANQPIAIHEFLYPLLQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L ++    +   LT PLL       KM K
Sbjct: 180 GYDSVALK----ADVELGGTDQKFNLLMGRELQKQAGMSQQCVLTMPLLEGLDGVNKMSK 235

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I + +    P   +    +I D  +  + + L+   +  I +        +    
Sbjct: 236 SLGNYIGIAEA---PEVIFAKIMSISDDLMWRYIELLSFETIETIAQWKAQVAAGENPRN 292

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K   A EI    H + +AEKA           I    +P ISI+ +     +G+  L+ 
Sbjct: 293 IKVGFAQEIVARFHSQADAEKALADFQTRAKGGIP-DDVPEISINIE--GENIGIAQLLK 349

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   ST+EA R ++   +K+++  +++  LQ+          I    GK+      + 
Sbjct: 350 LAGLVESTSEAYRAIEQGGVKLDSDKVTDRNLQLP-----KGMKIVAQVGKRKFANVTIV 404


>gi|13508408|ref|NP_110358.1| tyrosyl tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501075|sp|P75122|SYY_MYCPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1673835|gb|AAB95821.1| tyrosyl tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 399

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 150/414 (36%), Positives = 229/414 (55%), Gaps = 19/414 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              D L++L ERG   Q +  +EL  L +QG    Y+G+D TA SLH G+   L +    
Sbjct: 1   MTKDLLALLKERGLFVQANFEKELKQLLNQGSFAFYVGFDPTAPSLHIGNYVLLHVAQIF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH P  L+G GT++IGDP+ R E R+MM  + I EN   IK     F+      ++ 
Sbjct: 61  QAMGHIPHVLLGSGTALIGDPTGRMELRQMMSRETIAENTRNIKKQIRRFL-----GSNV 115

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +   NETWL  + YI+++RE+G  FSVN+ML+ ++  +R   E+ L+ +E NYM+LQAYD
Sbjct: 116 VFCQNETWLKKLNYIEVIRELGPCFSVNKMLATDAFSARW--ERGLTLMELNYMVLQAYD 173

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y  +LQ+GGSDQW NI+ G DL  R    +++ +T+ LL  A+G KMGK+ SG
Sbjct: 174 FYYLNQKYGVQLQIGGSDQWANILAGADLIRRKTQKQVYGMTTNLLVKANGEKMGKSASG 233

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ + TSPY+F+QYW N+DDA +      LT L    I+ +  L+G  I EAK  +A
Sbjct: 234 ALWLDPQKTSPYDFYQYWINLDDASLQKVFLMLTKLDTKAIETLCNLKGAAIKEAKAKLA 293

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T  +HG + A  A   +   F     ++           V  G  L+ +IV  G   
Sbjct: 294 FELTDAIHGTKAALVAQAKSARIFAFQPDTET--------KTVRAGTRLVDVIVDLGLVV 345

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S +EARR ++   + IN   +++ ++ ++      +  + +  GKK  +   + 
Sbjct: 346 SRSEARRVIQQGGLTINQEKVTDVEMVLQAS----SQPLVIGKGKKRFVTVQVI 395


>gi|85711799|ref|ZP_01042855.1| Tyrosyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694414|gb|EAQ32356.1| Tyrosyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 400

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 182/417 (43%), Gaps = 23/417 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++ ++ +  RG    +      D L     +    G+D TA  LH GH   +  L
Sbjct: 1   MTPQVAEAIAEI-TRGADEVLIESELADKLEQGKPLIIKAGFDPTAPDLHLGHTVLINKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHK + L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 60  RVFQDYGHKVVFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDP---- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T   +  N  W+ ++   D + ++ +  +V RML  +  + R +  QS++  EF Y ++Q
Sbjct: 116 TKTEIRFNSEWMNNLGA-DGMIKLAARQTVARMLERDDFKKRYQANQSIAIHEFLYPLVQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D VEL       ++MGG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 175 GWDSVELK----ADVEMGGTDQRFNLLMGRELQKEEGQRPQTVIMMPLLEGLDGVQKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +L+  I + +     +       +I D  +  + + L+  P+ +++   +    G+    
Sbjct: 231 SLNNYIGITEPANEMF---GKVMSISDELMWRYFELLSFRPLEQVEDFKQQVADGENPRN 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    A+KA    ++ F  +     +  + +   +   G+ +   + 
Sbjct: 288 IKVLLAKEIIARFHDEAAADKAEQDFIQRFQKNAIPDDIKEVEVKVGD--DGIAIGNALK 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG  +ST++A R +K +A+K +   I++ KL    +D           GK+     
Sbjct: 346 EAGLVSSTSDAMRMIKQSAVKRDGEKITDTKLMCTKEDSG-----VYQVGKRKFAKI 397


>gi|15616741|ref|NP_239953.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134935|sp|P57221|SYY_BUCAI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|25292899|pir||G84943 tyrosine-tRNA ligase (EC 6.1.1.1) [imported] - Buchnera sp.
           (strain APS)
 gi|10038804|dbj|BAB12839.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 422

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 159/423 (37%), Positives = 227/423 (53%), Gaps = 12/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L
Sbjct: 1   MSEF--NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK
Sbjct: 59  KRFQIAGHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A++LNN TW   I  +  LR++G +FSVN M++  +V+ R  + +Q +SF EF+Y +L
Sbjct: 119 NSAVLLNNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GK
Sbjct: 179 QAYDFFILNQQYQADLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA- 298
           T SG IWL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++ K +  +     
Sbjct: 239 TESGTIWLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNIKNQIIN 298

Query: 299 -KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMG 351
            K ++A  IT +VHG+E+   A       F  +         Q +    I   EVS    
Sbjct: 299 DKSLLAKHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDLQQLKQDGIPFIEVSNVKD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V    A S  +A+  + SN+I IN   I  +      +D        LS GKK H
Sbjct: 359 LQEALVLTSLAQSRTQAKNMIISNSISINTEKIR-KNHIFHEKDKLFGKFTLLSRGKKQH 417

Query: 412 IIC 414
            + 
Sbjct: 418 SLL 420


>gi|126173409|ref|YP_001049558.1| tyrosyl-tRNA synthetase [Shewanella baltica OS155]
 gi|217974300|ref|YP_002359051.1| tyrosyl-tRNA synthetase [Shewanella baltica OS223]
 gi|125996614|gb|ABN60689.1| tyrosyl-tRNA synthetase [Shewanella baltica OS155]
 gi|217499435|gb|ACK47628.1| tyrosyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 397

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 93/418 (22%), Positives = 174/418 (41%), Gaps = 26/418 (6%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPV----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALQ----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++  +         + K
Sbjct: 232 HNYIGVSEPANEMF---GKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI T  H    A+ A  A ++     +    +  + +   +   G+ +  L+  A
Sbjct: 289 IALAKEIITRFHDEASAQSAHQAFVD-RAKGMIPDDIDAVELVAGD---GLAIANLLKDA 344

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               ST+EA R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 345 DLVASTSEAMRMIKQGAVKMDGEKLDDSRMILSA-----GTVAVFQVGKRKFAKVTLV 397


>gi|82523698|emb|CAI78479.1| tyrosyl-tRNA synthetase [uncultured beta proteobacterium]
          Length = 402

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 92/418 (22%), Positives = 170/418 (40%), Gaps = 23/418 (5%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
               D L  +  RG    +     L+ L +   +    G+D TA  LH GH   L  L  
Sbjct: 5   NLMQDVLQEIK-RGTDELLVEAELLEKLKTGRPLRIKAGFDPTAPDLHLGHTVLLNKLRQ 63

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ + L+G  T +IGDP+ ++ +R  +  + + EN +  +      +        
Sbjct: 64  FQQLGHQVVFLIGDFTGMIGDPTGKNTTRPPLTREAVAENAKTYQEQVFKILDPAL---- 119

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  W+  +  + ++R   +  +V RML  +    R   +Q ++  EF Y ++Q Y
Sbjct: 120 TEVRFNSEWMEGLGSVGMIRLAATH-TVARMLERDDFHKRYTGQQPIAIHEFLYPLIQGY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +    P    LT PLL  T    KM K+L
Sbjct: 179 DSVALK----ADIELGGTDQKFNLLMGRELQKHHGQPAQCILTMPLLEGTDGVNKMSKSL 234

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +N+    P   +    +I D  +  +   L+   +  I    +           K
Sbjct: 235 GNYIGINEP---PQEIFGKLMSISDELMWRYIHLLSFESLQTIASWKQQVADGANPRNIK 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
              A EI    H    A +A       F        MP IS+    +   + +  L+ +A
Sbjct: 292 VRFAQEIVARFHDAAAATQALADFEARFQKGALPDEMPEISLPG--IEGALLVPQLLKQA 349

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G  +ST++A R +    ++++   ++++ + + +        +    GK+      + 
Sbjct: 350 GLVSSTSDAMRQIAGGGVRLDGERVADKGVAVPV-----GATVVAQVGKRKFARVTII 402


>gi|115436768|ref|NP_001043131.1| Os01g0500900 [Oryza sativa Japonica Group]
 gi|15408650|dbj|BAB64064.1| putative tyrosine-tRNA ligase [Oryza sativa Japonica Group]
 gi|113532662|dbj|BAF05045.1| Os01g0500900 [Oryza sativa Japonica Group]
 gi|125526089|gb|EAY74203.1| hypothetical protein OsI_02083 [Oryza sativa Indica Group]
 gi|215694904|dbj|BAG90095.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 497

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 141/455 (30%), Positives = 214/455 (47%), Gaps = 39/455 (8%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              +   + +L ERG +   ++        S   + AY G+D TA SLH G+L  L++L 
Sbjct: 43  TVIRRSVVEVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLS 102

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----- 116
           W ++ GH  ++L+GG T  +GDPS +   R  +    ++ N   IK +    +       
Sbjct: 103 WFRRCGHNAVALVGGATGRVGDPSGKSAERPELDLAAVETNSNAIKSLIGQILDRAPEPS 162

Query: 117 ---------------------GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                                G       +L+N  W   I  +D L+E+G F  V  M++
Sbjct: 163 QHSQSGKNLNLEQNEQALVNSGEKMGSFQILDNYDWWKDITLLDFLKEVGRFARVGTMIA 222

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            ESV+ RL  E  +S+ EF Y +LQ YDF+ + +N    +Q+GGSDQWGNI  G +L  +
Sbjct: 223 KESVKKRLMSEDGMSYTEFTYQLLQGYDFLYMFRNMGVNVQIGGSDQWGNITAGTELIRK 282

Query: 216 LKTPK-LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
           +   +    LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+ ++ D DV+ F K
Sbjct: 283 ILQVEGAHGLTFPLLLKSDGTKFGKTEDGAIWLSPKMLSPYKFYQYFFSVPDIDVIRFMK 342

Query: 275 RLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
            LT + + EI   +   K  G   N  ++ +A E+T  VHG E  E+A  A       + 
Sbjct: 343 ILTFMSLDEIQELEESMKKPGYVPNTIQRRLAEEVTRFVHGEEGLEEALKATEALRPGAQ 402

Query: 332 HSQHMPTISISKDEVSRGM---------GLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                 TI    D+V              L+ L V  G   S +  RR +K   + +NN 
Sbjct: 403 TQLDSQTIEGIADDVPSCFLPYGQVLKSPLVDLAVSTGLLASKSAVRRLIKQGGLYLNNI 462

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            I +E   ++  D      + LS GKKN ++  + 
Sbjct: 463 RIDSEDKLVEEGDVVDGKVLLLSAGKKNKMVVRIS 497


>gi|295098920|emb|CBK88009.1| tyrosyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 412

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 138/421 (32%), Positives = 214/421 (50%), Gaps = 22/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +  I++P  +    +   +T YIG D TA SLH GH + L++   L+K 
Sbjct: 2   NLFEELEWRGLVDNITSPE-VKDAINNEKLTFYIGTDPTADSLHIGHYSSLLMAKRLEKH 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GG T  IGDP      R M+  + ++ N + +    S    +         +
Sbjct: 61  GHHPIMLVGGATGFIGDPKA-TGERNMLTQETLKANYDALHEQISKLWGFEM-------V 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  ID LR+ G FF+VN M++ E+V+ RL  +  +S+ EF+YMILQ+ DF+ 
Sbjct: 113 NNLDWTKDISVIDFLRDYGKFFNVNYMINKETVKKRL--DTGISYTEFSYMILQSLDFLH 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGA 244
           L +  +C LQ+GG DQWGNI  G++L  +     +  + LT PL+T A GTK GK+ SG 
Sbjct: 171 LYQEKNCTLQIGGQDQWGNITSGLELIRKKCGADVKCYGLTMPLITKADGTKFGKSESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+   TSPY  +Q+  N DD  V+ + K+LT L   +I+ +            A+K +
Sbjct: 231 VWLDASKTSPYELYQFLFNTDDRKVIEYLKKLTFLTREQIEELEVSLQNEPHKRLAQKTL 290

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTLIV 357
           A+E+   +HG+E  + A       F   I             ++ K    +G  LL  +V
Sbjct: 291 ASEVVRDLHGQEGLDCALKITEALFKGKIQELTDDQKLDAIRNMEKLHCEQGKTLLETLV 350

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSFGKKNHIICH 415
           ++G A+S  EAR  +K N+I +N + I++    +   +          +  GKKN+    
Sbjct: 351 ESGIASSRREAREWIKGNSIMVNGTKITDPDYMMTPDNHCVCVKNYSIIRRGKKNYYCLE 410

Query: 416 L 416
           L
Sbjct: 411 L 411


>gi|167586143|ref|ZP_02378531.1| tyrosyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 413

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRD----KTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   M EI   R     G+   + K ++A EI
Sbjct: 256 EK---PNDMFGKLMSISDTLMWRYFELLSFRSMDEIVGFRREIETGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + I+++ L+I+       G   +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGTAITDKGLKIEA------GEYVVQVGKRRFARVTL 411


>gi|328675861|gb|AEB28536.1| Tyrosyl-tRNA synthetase cluster 1 [Francisella cf. novicida 3523]
          Length = 396

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 179/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIQETL--EIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W  ++   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 EKTVIRRNGDWFNNMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLETIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +          I+  E+S+ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKVDAESAHQDFIQRFQKNQIPDD-----INVVELSQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKVSDGKIV-----FAKGTNNVFQVGKRKFAKIII 395


>gi|156975677|ref|YP_001446584.1| tyrosyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156527271|gb|ABU72357.1| hypothetical protein VIBHAR_03412 [Vibrio harveyi ATCC BAA-1116]
          Length = 395

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI +        K   +
Sbjct: 230 SSGNYIGISEA---PSEMFGKIMSISDVLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFEAGTPVANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI    +++ K   ++      G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIEGEKVADAKFAPEV------GTYVFQVGKRKFARITI 394


>gi|219682052|ref|YP_002468436.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254783577|sp|B8D726|SYY_BUCAT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219621785|gb|ACL29941.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085865|gb|ADP65947.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086435|gb|ADP66516.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087018|gb|ADP67098.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 422

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 157/423 (37%), Positives = 224/423 (52%), Gaps = 12/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L
Sbjct: 1   MSEF--NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK
Sbjct: 59  KRFQIAGHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A++LNN TW   I  +  LR++G +FSVN M++  +V+ R  + +Q +SF EF+Y +L
Sbjct: 119 NSAVLLNNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GK
Sbjct: 179 QAYDFFILNQQYQVDLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T SG +WL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++ K +        
Sbjct: 239 TESGTVWLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNINNQIIN 298

Query: 300 KI--IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMG 351
               +A  IT +VHG+E+   A       F  +         Q +    I   EVS    
Sbjct: 299 DKSLLAKHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDLQQLKQDGIPFIEVSNVKD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V    A S  +A+  + SN+I IN   I  +      +D        LS GKK H
Sbjct: 359 LQEALVLTSLAQSRTQAKNMIISNSISINTEKIR-KNHIFHEKDKLFGKFTLLSRGKKQH 417

Query: 412 IIC 414
            + 
Sbjct: 418 SLL 420


>gi|160874366|ref|YP_001553682.1| tyrosyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160859888|gb|ABX48422.1| tyrosyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315266601|gb|ADT93454.1| tyrosyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 397

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 94/418 (22%), Positives = 175/418 (41%), Gaps = 26/418 (6%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L  
Sbjct: 1   MADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRL 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPV----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALQ----ADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++EI++  +         + K
Sbjct: 232 HNYIGVSEPANEMF---GKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI T  H    A+ A  A ++     +    +  + +   E   G+ +  L+  A
Sbjct: 289 IALAKEIITRFHDEASAQSAHQAFVD-RAKGMIPDDIDAVELVAGE---GLAIANLLKDA 344

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               ST+EA R +K  A+K++   + + ++ + +             GK+      L 
Sbjct: 345 DLVASTSEAMRMIKQGAVKMDGEKLDDSRMTLPV-----GTVAVFQVGKRKFAKVTLV 397


>gi|325983358|ref|YP_004295760.1| Tyrosyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532877|gb|ADZ27598.1| Tyrosyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 400

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 102/418 (24%), Positives = 182/418 (43%), Gaps = 24/418 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            + KS     + +RG    +        L S   +    G+D TA  LH GH   L  L 
Sbjct: 3   TSIKSQL--EIIKRGSQELLVETELEAKLVSGHPLRVKAGFDPTAPDLHLGHTVLLNKLR 60

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH  + L+G  T +IGDPS ++ +R  +  +++ EN +         +       
Sbjct: 61  QLQVMGHHILFLIGDFTGMIGDPSGKNSTRPPLTREQVAENAQSYTTQVFKILNPDQ--- 117

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N TW+  +   DL++   +  +V RML  +    R +  Q+++  EF Y ++Q 
Sbjct: 118 -TEVVFNSTWMGKMDAADLIKLAATH-TVARMLERDDFDKRYRNNQAIAIHEFLYPLIQG 175

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKT 240
           YD V L       L++GG+DQ  N++ G +L +     +   LT PLL       KM K+
Sbjct: 176 YDSVALK----ADLELGGTDQKFNLLMGRELQKHFGQAQQCILTMPLLEGLDGVNKMSKS 231

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEA 298
           L+  + + +   SP   +    ++ D  +  + + L+   +  I +       G+   + 
Sbjct: 232 LNNYVGITE---SPAEIFGKLMSVSDQLMWRYLELLSFESLQTIQKWREEVAAGRNPRDI 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K I+A E+ T  H R  AE A       F      + +P   I        + L+ ++ +
Sbjct: 289 KVILAQEMVTRFHNRTSAEDALADFEARFKHGALPEEIPEKIIQAP--GSEIPLVQVLKQ 346

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            G   ST+EA R ++  A+K+NN  I+++ +QI         ++ +  GK+      +
Sbjct: 347 TGLTASTSEALRMIEQGAVKLNNEKITDKSIQI-----MRGASVVIQVGKRKFAKAII 399


>gi|297568891|ref|YP_003690235.1| tyrosyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924806|gb|ADH85616.1| tyrosyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 403

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 177/408 (43%), Gaps = 27/408 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG +  +S       L         +    G+D TA  LH GH   +  +   Q  GH+ 
Sbjct: 12  RGAVQVVSPEDLRKKLLRAEETGVPLRVKAGFDPTAPDLHLGHTVLIQKMKHFQDLGHQI 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T  IGDP+ + E+R+ + ++++  N E  K      +          ++ N +
Sbjct: 72  LFLIGDFTGRIGDPTGKSETRKPLSAEDVARNAETYKEQVFKILDPD----KTQVVFNSS 127

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   D ++ + +  +V RML  E  + R   E+ +   EF Y ++Q YD V L   
Sbjct: 128 WLNELSSQDFIK-LAAQLTVARMLEREDFKQRFVNEKPIGVHEFLYPLIQGYDSVALK-- 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G DL           +T PLL       KM K+L+  I + +
Sbjct: 185 --ADIELGGTDQLFNLLTGRDLQRVWGQDPQVVITMPLLEGLDGVNKMSKSLANYIGICE 242

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKLQGKEINEAKKIIATEI 306
                 + +    ++ D+ +  + + L+ L  +EIDR     +       E K+ +A E+
Sbjct: 243 NAD---DIYGKTMSMPDSLMFRYYELLSDLSPAEIDRLKAEMEAGRAHPKEVKQQLAREL 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T   HG++ A++AA    + F      + +P I++   +  + + L  L+V AG    T 
Sbjct: 300 TARFHGQDAAQRAAANFDKVFKQHELPEDLPEITLPAGD--QAVWLPRLLVDAGLVKGTG 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR +   A+ +N        +        + G + L  GK+     
Sbjct: 358 EARRMIGQQAVSVNGEK-----VAEVEATVAAAGEVLLKVGKRRFCRV 400


>gi|317402596|gb|EFV83158.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 409

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 180/412 (43%), Gaps = 29/412 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 18  IAKRGCDELLVEAEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLG 77

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 78  HEVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAKTYYAQASLVLDPA----RTEIRY 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  E    R K    +S  EF Y ++Q YD V L
Sbjct: 134 NSEW-CDPLGARGMIQLASRYTVARMMEREDFTKRFKGGIPISVHEFLYPLMQGYDSVAL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +         LT PLL  T    KM K+    I 
Sbjct: 193 K----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGTDGVEKMSKSKGNYIG 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +++   SP + +    +I D  +  + + L+   + +I   R     G+   +AK ++A 
Sbjct: 249 ISE---SPDSMFGKLMSISDTLMWRYFELLSFRSLEDIAALRQEIDGGRNPRDAKVMLAQ 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H  + AE A  A    F      + MP +S+        +G+L L+ +AG   S
Sbjct: 306 EIITRFHSAKAAEDALAAFEARFRDGAIPEDMPEVSVG----GAPVGILKLLREAGLVAS 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +EA+R+++   +++N   + ++ LQ+        G   +  GK+      L
Sbjct: 362 GSEAQRNVEQGGVRVNGDRVEDKSLQLPA------GTYVVQVGKRKFARVKL 407


>gi|293603319|ref|ZP_06685747.1| tyrosine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818229|gb|EFF77282.1| tyrosine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 409

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 104/412 (25%), Positives = 181/412 (43%), Gaps = 29/412 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 18  IAKRGCDELLVESEFARKLAKSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLG 77

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 78  HNVIFLIGDFTSTIGDPSGRNSTRPPLTREQIESNAKTYYAQASLVLDPA----RTEIRY 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  E    R K    +S  EF Y ++Q YD V L
Sbjct: 134 NSEW-CDPLGARGMIQLASRYTVARMMEREDFTKRFKGGIPISVHEFLYPLMQGYDSVAL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +         LT PLL  T    KM K+    I 
Sbjct: 193 K----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGTDGVEKMSKSKGNYIG 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +++   SP + +    +I D  +  + + L+   + +I   +     G+   +AK ++A 
Sbjct: 249 ISE---SPDSMFGKLMSISDTLMWRYFELLSFRSLEDIAALKQETDGGRNPRDAKVMLAQ 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H  + AE+A  +    F      + MP ++I        +G+L L+ +AG   S
Sbjct: 306 EIITRFHSAKAAEEALASFEARFRDGAIPEDMPEVNIG----GAPVGILKLLREAGLVAS 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +EA+R+++   +++N   + ++ LQ+        G   +  GK+     +L
Sbjct: 362 GSEAQRNVEQGGVRVNGDRVEDKSLQLAA------GTYVVQVGKRKFARVNL 407


>gi|60593980|pdb|1X8X|A Chain A, Tyrosyl T-Rna Synthetase From E.Coli Complexed With
           Tyrosine
          Length = 322

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 133/319 (41%), Positives = 195/319 (61%), Gaps = 3/319 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAAT 321
           A ++T +VHG E  + A  
Sbjct: 304 AEQVTRLVHGEEGLQAAKR 322


>gi|169831527|ref|YP_001717509.1| tyrosyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638371|gb|ACA59877.1| tyrosyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 432

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 94/424 (22%), Positives = 171/424 (40%), Gaps = 31/424 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M          +  RG +  I    EL         +   +   +G D TA  +H GH  
Sbjct: 29  MSELDRQL--EIIRRGAVE-IIPEDELKEKLRRSLATGRPLQVKLGLDPTAPDIHLGHTV 85

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  L   Q  GH+   ++G  T+ +GDPS + E+R+ +  +E+  N    +      + 
Sbjct: 86  VLHKLRHFQDLGHQVTLVLGDYTARVGDPSGKTETRKPLTGEEVMANARTYEAQVFKILD 145

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N  WL  + +   + E+ S ++V RML  +    R      +S  EF 
Sbjct: 146 P----NRTRVRFNSEWLAPLDF-AAVLELASKYTVARMLERDDFAKRFHGGLPISIHEFF 200

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASG 234
           Y ++Q YD V L       +++GG+DQ  N++ G  L +        ALT+PLL      
Sbjct: 201 YPLMQGYDSVALK----ADVELGGTDQKFNLLMGRTLQKEYGQEPQVALTTPLLEGLDGV 256

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQ 291
            KM K+L   I + +    P   +    ++ D  +V + + +T + + E+  +       
Sbjct: 257 HKMSKSLGNYIGITEP---PEEMYGKLMSLSDDLMVRYFELVTPVSLEELRALKTGLETG 313

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-M 350
                + K  +A  +    HG++ A  A     + F        +P   +    ++ G +
Sbjct: 314 TVHPRDLKMRLARTVVETYHGKKAAAVAEDEFRKVFQQRELPTDIPDFPVPAGALTGGRI 373

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L  L+V AG  +ST+EARR +   A+K++   + +E       +      + +  G++ 
Sbjct: 374 WLPKLLVLAGLCSSTSEARRLIGQGAVKVDEQRVVDEN------EITPRTGMIIRVGRRK 427

Query: 411 HIIC 414
               
Sbjct: 428 FTRL 431


>gi|208779384|ref|ZP_03246730.1| tyrosyl-tRNA synthetase [Francisella novicida FTG]
 gi|208745184|gb|EDZ91482.1| tyrosyl-tRNA synthetase [Francisella novicida FTG]
          Length = 396

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 177/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSNIKETL--EIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    + + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYVGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAEIAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|109896842|ref|YP_660097.1| tyrosyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109699123|gb|ABG39043.1| tyrosyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 399

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 99/420 (23%), Positives = 174/420 (41%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++S F + L  RG    +     +  L     +    G+D TA  LH GH   +  L
Sbjct: 1   MADWQSAF-AELQ-RGAEEILLEEELIAKLKEGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RSFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+  +     + ++ S  +V RML  +  + R    Q ++  EF Y ++Q
Sbjct: 116 -KTTIRFNSEWMEGLGA-SGMIKLASSQTVARMLERDDFKKRYANGQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAL----ESDVELGGTDQRFNLLMGRELQKGQGQRPQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +L   I +     SP + +    +I D  +  +   L+   + EI    +         +
Sbjct: 230 SLGNYIGIT---DSPSDMFGKIMSISDDLMWRYYDLLSFKAIEEIALYKEQVAGGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    ++ F  +     MP  +      + GM +  L+ 
Sbjct: 287 IKIALAKEIIARFHDDAAAEAAHHEFIQRFQKNAIPDEMPEFTFEAG--AEGMAVANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +A    ST+EA R +K  A+K++   ++++K       F S        GK+      L 
Sbjct: 345 EAALVASTSEAMRMIKQGAVKMDGEKVADQKAI-----FTSLQEAVFQVGKRKFARVTLS 399


>gi|56707811|ref|YP_169707.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670282|ref|YP_666839.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224456880|ref|ZP_03665353.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370308|ref|ZP_04986313.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874625|ref|ZP_05247335.1| tyrS, tyrosyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81597696|sp|Q5NGY5|SYY_FRATT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56604303|emb|CAG45324.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320615|emb|CAL08707.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568551|gb|EDN34205.1| hypothetical protein FTBG_00062 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840624|gb|EET19060.1| tyrS, tyrosyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158985|gb|ADA78376.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 396

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GHK   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHKIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTIIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDEFMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|313901940|ref|ZP_07835357.1| tyrosyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467786|gb|EFR63283.1| tyrosyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 435

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 172/416 (41%), Gaps = 29/416 (6%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  RG    +S    L  L     +   +   +G D TA  LH GH   L  L   Q  
Sbjct: 39  ELLRRGAAEIVSEEELLQKLQRSVETGRPLRVKLGLDPTAPDLHIGHTVVLRKLRQFQDL 98

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ + ++G  T  IGDP+ +  +R  +  ++++ N           +          + 
Sbjct: 99  GHQVVLIIGDFTGRIGDPTGKSVTRPQLTEEQVRANARTYAEQLGRILD----MERTELT 154

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + D++  + + ++V RML  +    R +  + ++  EF Y + QAYD V 
Sbjct: 155 FNARWLGPMTFADVI-RLAARYTVARMLERDDFAQRYREGRPIAIHEFLYPLAQAYDSVA 213

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAI 245
           +       +++GG+DQ  N++ G ++          AL  PLL  T    KM K+L   I
Sbjct: 214 VR----ADVELGGTDQKFNLLVGREIQREYGQEAQVALLMPLLEGTDGKDKMSKSLGNYI 269

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
            +      P   +    +I D  +V +    T L M EI   ++          +AK  +
Sbjct: 270 AIA---DPPGEMFGKTMSIPDELIVKYMVLATDLDMGEIRRLEQGMASGQVNPRDAKLRL 326

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A  +  M HGR  A+ A    +  F        MP + +    +      + L+  AG A
Sbjct: 327 AHALVRMYHGRAAADAAQEEFLRVFSRHELPAEMPEVVLPAPRLDA----VRLLRAAGMA 382

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +S +EARR ++  A++++   +++ + ++   D        L  GK+      L G
Sbjct: 383 SSNSEARRLIEQGAVRLDGQRVASPQDELAPAD-----GAVLQVGKRRFARLRLPG 433


>gi|302391198|ref|YP_003827018.1| tyrosyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203275|gb|ADL11953.1| tyrosyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 410

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 102/415 (24%), Positives = 177/415 (42%), Gaps = 26/415 (6%)

Query: 11  ILSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG    IS     D L         +   +G D TA  +H GH   L  L   Q  
Sbjct: 12  QIIKRGVTELISEDELEDKLKEAQKEDRPLKVKLGLDPTAPDIHLGHTVVLQKLKQFQDL 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T  IGDPS + ++R  +  +E+ EN +  +      +          ++
Sbjct: 72  GHEVILLIGDFTGRIGDPSGKSKTRPQLTEEEVMENAKTYQEQIFKVLDPD----KTRLV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + +   +  + S ++V RML  E   +R +  QS+   EF Y ++Q YD V 
Sbjct: 128 FNSEWLGEMDF-ADVLNLSSKYTVARMLEREDFSNRYENNQSIGVHEFFYPLMQGYDSVA 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           +    +  +++GG+DQ  N++ G  L +         L  PLL       KM K+L   I
Sbjct: 187 I----EADVELGGTDQKFNLLVGRRLQKEYGQDPQVILMMPLLEGLDGEQKMSKSLGNYI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKII 302
            ++     P + +    +I D  +  + + LT + + E++ +            E KK +
Sbjct: 243 GID---DDPNDMYGKVMSIPDKLLGRYFELLTDVSLEELEEIKNGLSSGELHPMETKKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGF 361
           A  I    +    A+KAA      F      + +P + +S D +  G + ++ L+   G 
Sbjct: 300 AETIVAKYYDETTAKKAAREFERVFKDGELPEDIPQVELSSDRLEDGELWIVKLVAATGL 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S ++ARR +K  A+KI+        L ++++D      + +  GKK      L
Sbjct: 360 VDSNSQARRMIKQGAVKIDGEKYDKMNLDLEVED-----GMIIQIGKKRFAEIIL 409


>gi|254374400|ref|ZP_04989882.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572120|gb|EDN37774.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 396

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 177/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKGDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|16768608|gb|AAL28523.1| GM10508p [Drosophila melanogaster]
          Length = 442

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 130/445 (29%), Positives = 223/445 (50%), Gaps = 35/445 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M   + + L  L++RGF H I   +    +  L ++G  + Y G+D TA SLH G+L  +
Sbjct: 1   MS--QKNLL-ELTDRGFFHGIFPDTAAPRMKQLFTRGQQSIYAGFDPTADSLHVGNLLVI 57

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--- 114
           M L   Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+          
Sbjct: 58  MGLIHCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENH 117

Query: 115 --------KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                   K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E
Sbjct: 118 ENCLWDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESE 177

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALT 225
             +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT
Sbjct: 178 DGMSFTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLT 237

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PL+TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++
Sbjct: 238 LPLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVE 297

Query: 286 RMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +      E  +A+ ++A ++T +VHG    ++A       +  ++  + +  +++S+
Sbjct: 298 QLMREHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNV--EGLAELNLSE 355

Query: 344 DE------------VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +               GM +L L +KA    +  +A R + +    +N   + N    +
Sbjct: 356 IQQTFQGATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVL 415

Query: 392 KLQ-DFDSTGNIKLSFGKKNHIICH 415
                    G   L  GK+N  I  
Sbjct: 416 TTGVHILRNGISLLRVGKRNFYIVR 440


>gi|332678286|gb|AEE87415.1| Tyrosyl-tRNA synthetase cluster 1 [Francisella cf. novicida Fx1]
          Length = 396

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 176/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSNIKETL--EIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKGDAEIAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|187931843|ref|YP_001891828.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187712752|gb|ACD31049.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 396

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|262393369|ref|YP_003285223.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262336963|gb|ACY50758.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 395

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 92/419 (21%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEDRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I +++    P   +    +I D  + S+ + L+  P+ EI +        K   +
Sbjct: 230 SANNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGRPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   S+++A R +K  A+K++   I++ K   +       G      GK+      +
Sbjct: 342 EAGLCPSSSDAMRMVKQGAVKMDGEKIADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|89256317|ref|YP_513679.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314762|ref|YP_763485.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|167010168|ref|ZP_02275099.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367649|ref|ZP_04983670.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|89144148|emb|CAJ79407.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129661|gb|ABI82848.1| tyrosine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253460|gb|EBA52554.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
          Length = 396

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|20130383|ref|NP_611967.1| CG16912 [Drosophila melanogaster]
 gi|50401704|sp|Q9W107|SYYM_DROME RecName: Full=Probable tyrosyl-tRNA synthetase, mitochondrial;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|7291852|gb|AAF47271.1| CG16912 [Drosophila melanogaster]
 gi|157816396|gb|ABV82192.1| FI02013p [Drosophila melanogaster]
          Length = 464

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 130/445 (29%), Positives = 223/445 (50%), Gaps = 35/445 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M   + + L  L++RGF H I   +    +  L ++G  + Y G+D TA SLH G+L  +
Sbjct: 23  MS--QKNLL-ELTDRGFFHGIFPDTAAPRMKQLFTRGQQSIYAGFDPTADSLHVGNLLVI 79

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--- 114
           M L   Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+          
Sbjct: 80  MGLIHCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENH 139

Query: 115 --------KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                   K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E
Sbjct: 140 ENCLWDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESE 199

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALT 225
             +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT
Sbjct: 200 DGMSFTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLT 259

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PL+TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++
Sbjct: 260 LPLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVE 319

Query: 286 RMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +      E  +A+ ++A ++T +VHG    ++A       +  ++  + +  +++S+
Sbjct: 320 QLMREHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNV--EGLAELNLSE 377

Query: 344 DE------------VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +               GM +L L +KA    +  +A R + +    +N   + N    +
Sbjct: 378 IQQTFQGATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVL 437

Query: 392 KLQ-DFDSTGNIKLSFGKKNHIICH 415
                    G   L  GK+N  I  
Sbjct: 438 TTGVHILRNGISLLRVGKRNFYIVR 462


>gi|297171886|gb|ADI22874.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_32L01]
          Length = 392

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 95/411 (23%), Positives = 175/411 (42%), Gaps = 23/411 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           ++ L  RG    I +   +  L     +   +G+D TA  LH GH   +  +   Q  GH
Sbjct: 1   MAELR-RGVEEIIPDEELIARLRGDRPLRVKVGFDPTAPDLHLGHTVVVNKMRQFQDFGH 59

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T +IGDPS +  +R  +   EI++N    +      +          +  N
Sbjct: 60  EIIFLIGDFTGMIGDPSGKSTTRPPLSRDEIEQNAVTYREQVFKILDPK----KTRIEFN 115

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +   + L  + + ++V R+L  +   +R +  + ++  EF Y ++Q YD V L 
Sbjct: 116 SVWGNELGA-EGLIRLAARYTVARILERDDFSTRYRNGEPIAIHEFLYPLMQGYDSVALK 174

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G +L ++   P    LT PLL       KM K+L   + +
Sbjct: 175 ----VDVELGGTDQKFNLLVGRELQKQYGQPPQIVLTMPLLEGLDGVRKMSKSLDNYVGI 230

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
            +   SP   +    +I D  +  +   L+   ++E++++     +G    + K I+A E
Sbjct: 231 TE---SPDEMFGKLMSISDDLMWRYFDLLSLRNVTELEQLKMDAVEGVNPRDIKYILAGE 287

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H   +A +A    +  F        +    ++       M + T+I  AG   ST
Sbjct: 288 IVERFHSASDARRAKEEFVNRFQKGEMPARIVEKVVNSR--GEEMPIATVIKVAGLVAST 345

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R LK  A++I+   +++   +I + D           GK       +
Sbjct: 346 SEALRMLKQGAVRIDGERVTDRDRKIGVGDAG-----IFQVGKHRFARIRV 391


>gi|241668381|ref|ZP_04755959.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876914|ref|ZP_05249624.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842935|gb|EET21349.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 396

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 175/419 (41%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSTIQQTL--EIIKRGADEVLIEEELVKKLEKNRPLVIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   D+++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 EKTVIRRNGDWFDKMSASDMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I + +    P + +    +I D  +  + + L+   +  I  + +         +
Sbjct: 230 SSQNYIGIEEN---PNDMFGKVMSISDELMWRYYELLSFKSLDTIANLKQDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A+KI+     + K       F          GK+      +
Sbjct: 342 EAGLVASTSEAIRMIKQGAVKIDGEKAEDNKAI-----FGKGTENVFQVGKRKFAKVII 395


>gi|221202301|ref|ZP_03575335.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221209115|ref|ZP_03582109.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171019|gb|EEE03472.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177875|gb|EEE10288.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 454

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 181/411 (44%), Gaps = 30/411 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 66  KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 125

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 126 VIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRD----KTEIRYNS 181

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 182 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 238

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 239 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 296

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   M EI   +     G+   + K ++A EI
Sbjct: 297 EK---PTDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFKREAEGGRNPRDFKVMLAQEI 353

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P++S++       + +  L+ +AG   ST+
Sbjct: 354 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVSLA----GAPLAIGQLLKQAGLVPSTS 408

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R+++   +KI+ + +S++ L++        G   +  GK+      L 
Sbjct: 409 EALRNIEQGGVKIDGTTVSDKGLKV------DAGEYVVQVGKRRFARVTLA 453


>gi|189349410|ref|YP_001945038.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333432|dbj|BAG42502.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 413

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 181/411 (44%), Gaps = 30/411 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRD----KTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   M EI   +     G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFKREAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P++S++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVSLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R+++   +KI+ + +S++ L++        G   +  GK+      L 
Sbjct: 368 EALRNIEQGGVKIDGTTVSDKGLKV------DAGEYVVQVGKRRFARVTLA 412


>gi|161525869|ref|YP_001580881.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221214507|ref|ZP_03587478.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|160343298|gb|ABX16384.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221165764|gb|EED98239.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 454

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 181/411 (44%), Gaps = 30/411 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 66  KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 125

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 126 VIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRD----KTEIRYNS 181

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 182 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 238

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 239 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 296

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   M EI   +     G+   + K ++A EI
Sbjct: 297 EK---PTDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFKREAEGGRNPRDFKVMLAQEI 353

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P++S++       + +  L+ +AG   ST+
Sbjct: 354 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVSLA----GAPLAIGQLLKQAGLVPSTS 408

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R+++   +KI+ + +S++ L++        G   +  GK+      L 
Sbjct: 409 EALRNIEQGGVKIDGTTVSDKGLKV------DAGEYVVQVGKRRFARVTLA 453


>gi|262401671|ref|ZP_06078237.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262352088|gb|EEZ01218.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 395

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 170/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ +I +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEQIAQFKADVKNGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP       E + G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSESDADAAEQEFINRFQKGAMPEEMPEF-----EFATGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVGSTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTSVYQVGKRKFARVTI 394


>gi|88813746|ref|ZP_01128966.1| tyrosyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88788999|gb|EAR20146.1| tyrosyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 427

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 102/406 (25%), Positives = 180/406 (44%), Gaps = 22/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  +        L     +    G+D TA  LH GH   +  L   Q  GH+ + L+
Sbjct: 34  RGAVDILPTGELEARLTLGRPLRVKAGFDPTAPDLHLGHTVLIHKLRQFQDLGHEVLFLI 93

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDPS +  +R+++   E+  N    +      ++ G       ++ N +W+ S
Sbjct: 94  GDFTGMIGDPSGKSATRKVLTRDEVLSNARTYEEQIFKILQPG----RTQVVFNSSWMDS 149

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D++ ++ + ++V RML  +  R R    Q+++  EF Y ++Q YD V L       
Sbjct: 150 LSAADMI-QLAAQYTVARMLERDDFRQRYLTNQAIAIHEFLYPLVQGYDSVALK----AD 204

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         +T P+L    G  KM K+L   + + +    
Sbjct: 205 IELGGTDQKFNLLVGRELQKAYGQRPQVIMTLPILEGLDGIQKMSKSLGNYVGIREA--- 261

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVH 311
           P   +    +I D  +  + + L+     EI+R   A  QG    + K ++A EI    H
Sbjct: 262 PDEIFGKLMSISDELMWRYMELLSFRSPREIERLGEAVRQGGNPRDVKYLLAEEIVERFH 321

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           GR  A +A    +  F      Q +P + ++      GM +  L+ +AG  +ST+EA R 
Sbjct: 322 GRHAATRAREEFIARFQRGATPQELPEVMVAAP--GDGMLIGNLLKEAGLVSSTSEAMRL 379

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K  A++I++  I N  L I               GK+      + 
Sbjct: 380 MKQRAVRIDDECIENRALCIAP-----GSVHVYKVGKRRVARIKVI 420


>gi|78486288|ref|YP_392213.1| tyrosyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|115305828|sp|Q31E84|SYY_THICR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78364574|gb|ABB42539.1| tyrosyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 398

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 90/408 (22%), Positives = 172/408 (42%), Gaps = 25/408 (6%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
            +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ + 
Sbjct: 12  IQRGAEEILVEKELIEKLKKGKPLKIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEILF 71

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T++IGDP+ +  +R  +  +++ +N E  K      +          ++ N  W+
Sbjct: 72  LIGDFTAMIGDPTGKSATRPPLSEEDVLKNAETYKEQVFKILDPA----KTKVVFNSEWM 127

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D+++ +    +V RML       R +    ++  EF Y ++Q YD V L    D
Sbjct: 128 SKLSAADMIK-LAGTTTVARMLERNDFGERYQSNTPIAIHEFLYPLVQGYDSVAL----D 182

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L +         LT P+L       KM K+L+  I +    
Sbjct: 183 SDIELGGTDQKFNLLMGRTLQQHYGKEAQCTLTMPILEGLDGVQKMSKSLNNYIGIK--- 239

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTM 309
            +P + +    ++ D  +  + + L+   +  I   + A   G+     K  +A E+   
Sbjct: 240 DAPNDMFGKVMSVSDELMWRYFELLSFESLETIAGYKDAVANGENPRNIKIKLALELIER 299

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H +E AE A       F  +     MP  + ++      M L  L+ +AG  +ST++  
Sbjct: 300 FHDKESAEAALKDFETRFSKNAIPDEMPEFTFNEV-----MPLANLLKEAGLVSSTSDGH 354

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R +K  A+K+N   +++ +  ++  +           GK+      + 
Sbjct: 355 RMVKQGAVKLNGEKVTDSRAPVENCEQQ-----VYQVGKRKFARITVA 397


>gi|114564135|ref|YP_751649.1| tyrosyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114335428|gb|ABI72810.1| tyrosyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 398

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 93/417 (22%), Positives = 175/417 (41%), Gaps = 25/417 (5%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            ++   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  +  
Sbjct: 1   MANLDQVLAEIKRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRT 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +        
Sbjct: 61  FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N +WL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ Y
Sbjct: 117 TRIEFNSSWLEPLGA-AGMIRLASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTL 241
           D V L       +++GG+DQ  N++ G +L +         +  PLL       KM K+ 
Sbjct: 176 DSVALK----ADVELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSKSA 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              I +++     +       +I D  +  + + L+  P++E+ +            + K
Sbjct: 232 HNYIGVSEPANEMF---GKLMSISDDLMWRYLELLSFRPLTELAQFKLDVENGTNPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            ++A EI    H  E+A+ A  A ++ F        +  + +   E   G+ +  L+  A
Sbjct: 289 ILLAKEIIARFHDEEQAQAAHQAFIDRFQKGAIPDDIEEVVL---EAGEGIAIANLLKDA 345

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G   ST++  R +K  A+K++   I + +       F++        GK+      L
Sbjct: 346 GLVGSTSDGIRMIKQGAVKMDGEKIEDSRQI-----FNAGLEAVFQVGKRKFAKVIL 397


>gi|290953151|ref|ZP_06557772.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313679|ref|ZP_06804263.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
          Length = 396

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVICRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|169656595|ref|YP_001428451.2| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|164551663|gb|ABU61495.2| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 413

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 18  MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 75

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 76  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVAANAETYTKQVFKILDKD--- 132

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 133 -KTVICRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 190

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 191 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 246

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 247 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 303

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 304 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 358

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 359 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKIII 412


>gi|207727940|ref|YP_002256334.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206591183|emb|CAQ56795.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 433

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 181/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 43  EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 102

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 103 GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 158

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 159 YNSEW-SDPLGARGMIQLAARYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 217

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 218 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 273

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
            + +    P   +    +I D  + ++   L+  PM+EI+RM +     +   + K ++A
Sbjct: 274 GIAEV---PGEMFGKLMSISDDLMWTYFTLLSFRPMAEIERMKQEVALGRNPRDCKVLLA 330

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 331 QEIIARFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPIGIAQLLKQAGLCP 385

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 386 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 433


>gi|157126543|ref|XP_001660920.1| tyrosyl-tRNA synthetase [Aedes aegypti]
 gi|108873226|gb|EAT37451.1| tyrosyl-tRNA synthetase [Aedes aegypti]
          Length = 463

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 130/436 (29%), Positives = 206/436 (47%), Gaps = 28/436 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDI---LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + L  L +RGF   +     +D    +      T Y G+D TA SLH G+L  ++ L   
Sbjct: 26  NILK-LQDRGFFQDVFPAEAIDKARSMLGASPQTVYAGFDPTADSLHVGNLLVIIGLLHA 84

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK--- 120
           Q+ GH+PI+L+GG T  IGDPS R   R+ M    +  N+  I     +  +        
Sbjct: 85  QRAGHQPIALLGGATGQIGDPSGRKTERQAMLLDMVNHNLACIGSQMDTIFQNHRKFLWE 144

Query: 121 --------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                      L++NN  W   + ++  +  +G  F +  MLS  SV+SRL+ E  +SF 
Sbjct: 145 KRGHSGALKPVLVVNNADWYRELNFVQFISSVGRHFRMGSMLSRASVQSRLQSEGGMSFT 204

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF Y I QAYD++ L K ++CR Q+GGSDQ GNI+ G +L  R+    ++ LT PL+T  
Sbjct: 205 EFTYQIFQAYDWLHLLKAHNCRFQLGGSDQMGNIMSGHELISRVDRKDVYGLTLPLITNE 264

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
            G K GK+   A+WL+ + TSPY  +Q++    D++V    K LT +P+ EI  +     
Sbjct: 265 EGDKFGKSAGNAVWLSGDKTSPYALYQFFVRTPDSEVEKLLKLLTFMPLDEIRSVMARHQ 324

Query: 293 KEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS---------- 340
           +     EA+K +A E+T +VHG E  +KA       +  ++ +     +           
Sbjct: 325 RTPELWEAQKKLAQELTLLVHGEEGLKKAEDITAALYSGNVEALGELEVKDIKQTFGGAP 384

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDST 399
           +       GM +L + ++A    +  +A R + +    IN +   N    +         
Sbjct: 385 VVDILPEPGMTVLQVAMRAKCFPTEKDAIRIIGAGGFTINLNKAKNPAEVLAPGVHILKN 444

Query: 400 GNIKLSFGKKNHIICH 415
           G   L  GK+N+ I  
Sbjct: 445 GISLLRVGKRNYYIVK 460


>gi|254369294|ref|ZP_04985306.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122244|gb|EDO66384.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 396

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPND-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|94309362|ref|YP_582572.1| tyrosyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353214|gb|ABF07303.1| Tyrosyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 413

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 179/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +     L  L         +   +G D TA  +H GH   L  L  LQ  
Sbjct: 23  EITKRGCDELLVESEWLQKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDL 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          + 
Sbjct: 83  GHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPA----RTEIR 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R +    +S  EF Y ++Q YD V 
Sbjct: 139 YNSEW-CDPLGARGMIQLAAKYTVARMMERDDFTKRFRSGIPISVHEFLYPLMQGYDSVA 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+ +  I
Sbjct: 198 LK----SDLELGGTDQKFNLLVGRELQKEYGQESQCILTMPLLVGLDGVEKMSKSKNNYI 253

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +    P + +    +I D  +  +   L+  PMSEID  +     G+   + K  +A
Sbjct: 254 GVTEA---PNDMFGKLMSISDELMWQYYTLLSFRPMSEIDLMKSEVALGRNPRDCKVALA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI T  H + +AEKA           +    +P +S+        +G+  L+ +A    
Sbjct: 311 QEIVTRFHSQADAEKALEDFNHRARGGVP-DDIPAVSLE----GAPLGIAQLLKQANLVP 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ +++S++  ++        G   +  GK+      L 
Sbjct: 366 STSEANRNIEQGGVKIDGAVVSDKSTKVVA------GTYVVQVGKRRFARVTLS 413


>gi|125570522|gb|EAZ12037.1| hypothetical protein OsJ_01916 [Oryza sativa Japonica Group]
          Length = 545

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 140/424 (33%), Positives = 213/424 (50%), Gaps = 15/424 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +S+L ERG +   ++        S   + AY G+D TA SLH G+L  L++L W ++ GH
Sbjct: 122 VSVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLSWFRRCGH 181

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM--L 126
             ++L+GG T  +G PS +   R  +    ++ N   IK +    +      ++     L
Sbjct: 182 NAVALVGGATGRVGYPSGKSPERPELELAAVETNSNAIKSLIGQILDRAPEPSNIRNPIL 241

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   I  +D L+E+G F  V  M++ ESV+ RL  E  +S+ EF Y +LQ YDF+ 
Sbjct: 242 DNYDWWKDITLLDFLKEVGRFARVGTMIAKESVKKRLMSEDGMSYTEFTYQLLQGYDFLY 301

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           + +N    +Q+GGSDQWGNI  G +L  ++   +    LT PLL  + GTK GKT  GAI
Sbjct: 302 MFRNMGVNVQIGGSDQWGNITAGTELIRKILQVEGAHGLTFPLLLKSDGTKFGKTEDGAI 361

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
           WL+ +M SPY F+QY+ ++ D DV+ F K LT + + EI   +   K  G   N  ++ +
Sbjct: 362 WLSPKMLSPYKFYQYFFSVPDIDVIRFMKILTFMSLDEIQELEESMKKPGYVPNTIQRRL 421

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---------GLL 353
           A E+T  VHG E  E+A  A       +       TI    D+V              L+
Sbjct: 422 AEEVTRFVHGEEGLEEALKATEALRPGAQTQLDSQTIEGIADDVPSCFLPYGQVLKSPLV 481

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L V  G   S +  RR +K   + +NN  I +E   ++  D      + LS GKKN ++
Sbjct: 482 DLAVSTGLLASKSAVRRLIKQGGLYLNNIRIDSEDKLVEEGDVVDGKVLLLSAGKKNKMV 541

Query: 414 CHLC 417
             + 
Sbjct: 542 VRIS 545



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              +   + +L ERG +   ++        S   + AY G+D TA SLH G+L  L++L 
Sbjct: 43  TVIRRSVVEVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLS 102

Query: 62  WLQKTGHKPISLMGGGT 78
           W ++ GH  ++L+GG T
Sbjct: 103 WFRRCGHNAVALVGGAT 119


>gi|134302006|ref|YP_001121975.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049783|gb|ABO46854.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 406

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 11  MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 68

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 69  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILDKD--- 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 126 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 183

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 184 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 240 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 296

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 297 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 351

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 352 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKIII 405


>gi|167629889|ref|YP_001680388.1| tyrosyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592629|gb|ABZ84377.1| tyrosyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 417

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 102/415 (24%), Positives = 177/415 (42%), Gaps = 27/415 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG    +     +  L     ++  +   +G D TA  +H GH   L  L   Q  G
Sbjct: 21  LIRRGTAEIVPEEDLVKKLKDAIVNRRPLRVKLGLDPTAPDIHLGHTVVLRKLRDFQDLG 80

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T  +GDPS + E+R+ +  +E+  N    K      +          M  
Sbjct: 81  HQVVIVIGDFTGRVGDPSGKSETRKQLTEEEVNRNAATYKEQIFKVLDPA----KTEMTF 136

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + +   + ++ + ++V RML  +    R++    +   E  Y ++Q YD V L
Sbjct: 137 NSHWLQPLNF-ADILQLAAKYTVARMLERDDFSKRMRENLPIGVHELFYPLMQGYDSVAL 195

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G  L +        AL  P+L       KM K+L   I 
Sbjct: 196 R----ADVELGGTDQKFNLLVGRVLQKEYGQEPQVALMMPILEGLDGVNKMSKSLGNYIG 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIA 303
           +N+   SP   +    +I DA +V + + +T +   EI  +A+          +AK  +A
Sbjct: 252 VNE---SPREIYGKTMSIADALMVRYFELVTRVSAEEIQSIAEGLKSGALHPRDAKMRLA 308

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFA 362
            EI  + HG E A+ A    +  F        +P   +  + +  G +GL+  +V +G A
Sbjct: 309 REIVALFHGNEAAQAAQDEFINIFQKRELPDEIPDFIVPAEHIQDGKVGLVKALVLSGLA 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            S  EARR +   A+K++N  I +    I ++         L  GK+  +   L 
Sbjct: 369 ASNGEARRKITEGAVKVDNETIKDFNTMIPVE------GTLLRLGKRKFVRLLLA 417


>gi|326519552|dbj|BAK00149.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531108|dbj|BAK04905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 512

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 139/456 (30%), Positives = 216/456 (47%), Gaps = 55/456 (12%)

Query: 16  GFIHQISNPRELDILCSQG---VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           G +   ++        + G    +  Y G+D TA SLH G+L  L+ L W ++ GH  ++
Sbjct: 58  GLVEATTSEALGSSSAASGEQQQLKVYCGFDPTAESLHLGNLLGLVALSWFRRCGHTAVA 117

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------------------ 114
           L+GG T  +GDPS +   R  +    +  N + IK + +  +                  
Sbjct: 118 LVGGATGRVGDPSGKSAERPELDLAAVVANSDAIKSLIAQILSRAPEPSHHAQSGKSAIL 177

Query: 115 -------------------KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                                G      ++L+N  W   I  +D L+E+G F  V  M++
Sbjct: 178 EKHEDALAKSGQGLSEESGNVGESMGSFVILDNYDWWKDITLLDFLKEVGKFARVGTMIA 237

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            ESV+ RL  E  +S+ EF Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G DL  +
Sbjct: 238 KESVKKRLNSEDGMSYTEFTYQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTDLIRK 297

Query: 216 LKTPK-LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
           +   +    LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+ ++ D DVV F +
Sbjct: 298 ILQVEGAHGLTFPLLLKSDGTKFGKTEDGAIWLSSKMLSPYKFYQYFFSVPDVDVVRFMR 357

Query: 275 RLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA----------AT 321
            LT L + EI   +   K  G   N  ++ +A E+T  VHG+E  E+A          A 
Sbjct: 358 ILTFLSLDEIHELEESMKKPGYVPNTVQRRLAEEVTLFVHGQEGLEEALKATEALRPGAQ 417

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             ++   +   +  +P+ S+  D+V +   L+ L    G   S +  RR +K   + +NN
Sbjct: 418 TQLDSQTIEGIADDVPSCSLPYDQVLKS-PLVDLAASTGLLASKSAVRRLIKQGGLYLNN 476

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             I +E   ++  D      + LS GKKN ++  + 
Sbjct: 477 KKIDSEDKLVEEGDIVDGKVLLLSAGKKNKMVVRIS 512


>gi|294139677|ref|YP_003555655.1| tyrosyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326146|dbj|BAJ00877.1| tyrosyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 398

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 173/420 (41%), Gaps = 25/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M      F  I  +RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLDQAFAEI--KRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIEFNSTWLEPLGA-AGMIRLASKQTVARMMERDDFKKRYTSGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
           +    I +++     +       +I D  +  + + L+  P+ EI++       G    +
Sbjct: 230 SAHNYIGVSEPAGEMF---GKIMSISDVLMWRYFELLSFRPLGEIEQFKADIEAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI T  H    AE A    +  F        +  + ++   V  G+ +  L+ 
Sbjct: 287 IKIALAKEIITRFHDEAAAEAAHQEFINRFQKGAIPDDIEEVELN---VGDGIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + GF  ST++A R +K  A KI+   I + +LQ+               GK+      L 
Sbjct: 344 ELGFVKSTSDAMRMIKQGAAKIDGVKIEDTRLQLTA-----GTTGIFQMGKRKFAKVTLV 398


>gi|83858728|ref|ZP_00952250.1| tyrosyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853551|gb|EAP91403.1| tyrosyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 429

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 227/421 (53%), Gaps = 14/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL+ +  RG ++Q +     D   ++     Y+G+D +A SLHAG+L  L+ +   ++ G
Sbjct: 13  FLADMEARGLLNQKTPE-LTDAYITEHRPAMYVGFDPSAPSLHAGNLMPLLGMDRYRQRG 71

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            + + L+GG T +IGDPS +D  R +     ++ NIE  +  F        G      +N
Sbjct: 72  GQVVVLLGGATGLIGDPSGKDAERNLQTEDVVEANIEGQRKQFERLFALTDGPEPI-YVN 130

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +  LR++G  FSVN ML+ +SVR+R+  R+Q +SF EF+Y +LQ YDFV 
Sbjct: 131 NADWWRKMDVVSFLRDVGKHFSVNAMLTKDSVRNRIENRDQGISFTEFSYQLLQGYDFVH 190

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++ ++QMGGSDQWGNI+ G+DL  R++  +  A+T PLLT + G K GK+  GA+W
Sbjct: 191 LHRAHNVQIQMGGSDQWGNIVGGVDLMRRIEGVQAHAVTYPLLTNSEGKKYGKSEKGAVW 250

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           ++ ++TSPY F+Q+W N  DAD   F   LT + +++++ + + +       +K +A  +
Sbjct: 251 IDPDLTSPYEFYQFWLNSADADAPKFLSWLTDVDLAQLEELTQAEPHL-RLPQKALAELL 309

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLTLIVK- 358
           T  VHG++ A+ A  A+   F     +     I +    V       +  + L+  +V  
Sbjct: 310 TARVHGQKAADLAIEASQVIFKGQSDNLSAELIDMIARAVPTLDASANEPLPLIDALVAE 369

Query: 359 -AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G + S +EARR LK N++ +N   + +E   +  +     G + +S GK    +    
Sbjct: 370 TLGASASKSEARRLLKQNSVSLNGQKVQDENADV-REHRTGAGAVVMSVGKAKRFLIRFN 428

Query: 418 G 418
           G
Sbjct: 429 G 429


>gi|163781672|ref|ZP_02176672.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882892|gb|EDP76396.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 399

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 105/405 (25%), Positives = 176/405 (43%), Gaps = 24/405 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ++G    I     L  L     +    G+D TA  LH GH+  L  L   Q+ GH+  
Sbjct: 16  LLKQGTSEVIEEEELLKKLKEGRPLRVKAGFDPTAPDLHLGHVVLLQKLRQFQQLGHEVY 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDP+ R E+R  +  +++ EN +  +      +          ++ N TW
Sbjct: 76  FIIGDFTAMIGDPTGRSETRPPLTKEQVLENAKTYEHQVFKVLDP----EKTTIVFNSTW 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +   + L ++ + ++V RML  +    R K    +   EF Y +LQAYD V +    
Sbjct: 132 LQELGT-EGLIKLSAKYTVARMLERDDFSKRFKEGIPIYIHEFLYPLLQAYDSVAIK--- 187

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G D+           +T PLL       KM K+    + + ++
Sbjct: 188 -ADVELGGTDQKFNLLIGRDIQREYGQEPQVCITMPLLVGLDGVRKMSKSYGNYVGITED 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P   +    +I D  +  +   LT     EI++    +     EAKK +A  I +  
Sbjct: 247 ---PKTMFGKLMSISDELMWDYYLLLTDYTEEEIEK--FRKEWHPMEAKKHLAELIVSRF 301

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  EEA+KA       +      +  P + +  +E    M  L LI + G  +S NE RR
Sbjct: 302 HSEEEAKKAREWFESTYSKRKFPEDAPLVELPHEE----MTALDLITELGAVSSKNEGRR 357

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ++   +K+N   +S+    IKL      G +K+  GKK      
Sbjct: 358 VIQGGGLKVNFEKVSDPYQSIKL-----DGELKVQVGKKKFYRVR 397


>gi|62185046|ref|YP_219831.1| tyrosyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312787|sp|Q5L661|SYY_CHLAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|62148113|emb|CAH63870.1| tyrosyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 412

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 134/422 (31%), Positives = 211/422 (50%), Gaps = 19/422 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  + 
Sbjct: 1   MRDFIQHLQDRGILENFSS--GLDNVST--PVSAYLGFDPTAPSLHIGHWIGICFLRRMA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+G  T +IGDPS +   R ++   ++  N +K+    + ++          
Sbjct: 57  HFGLTPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLAYYLP------GVQ 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF
Sbjct: 111 IVNNIDWLKETTVIDFLRDVGKHFRLGVMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +NY   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG 
Sbjct: 171 AYLFENYGVCLQCGGSDQWGNITSGIDYIRRHGLGQAYGLTYPLLTNSQGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+ ++TSPY  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A 
Sbjct: 231 IWLDPKLTSPYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS--------ISKDEVSR-GMGLLTL 355
            + T +HG +   +A           + S               +S +     G   + L
Sbjct: 291 TLVTSIHGEDGLREAQVVTQSIHPGKVSSVSEKDFQDLVAMGQAVSLEGTQALGKRWIDL 350

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  ++  
Sbjct: 351 FVALGVCSSKGEARRLIEQKGLYVNSEPIENEHSVFEETQVCFDQYVLLAQGKKKKLVLR 410

Query: 416 LC 417
           L 
Sbjct: 411 LI 412


>gi|261212258|ref|ZP_05926544.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838866|gb|EEX65517.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 395

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 171/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 115 SKTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ EI +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVQNGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI T  H   +A+ A    +  F      + MP       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIITRFHTAADADAAEQEFINRFQKGAMPEEMPEF-----EFDAGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVGSTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTSVYQVGKRKFARVTI 394


>gi|317121680|ref|YP_004101683.1| tyrosyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591660|gb|ADU50956.1| tyrosyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 421

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 170/416 (40%), Gaps = 30/416 (7%)

Query: 9   LSILSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L +L  RG    +S    L      L +   +   +G D TA  LH GH   L  L   Q
Sbjct: 24  LEVLR-RGAAEIVSEEELLQKIQRSLQTGRPLRVKLGLDPTAPDLHVGHTVVLRKLRQFQ 82

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ + ++G  T  IGDP+ +  +R  +  ++++EN           +          
Sbjct: 83  DLGHQVVLIIGDFTGRIGDPTGKSVTRPQLTEEQVRENARTYAEQLGRILDMER-----T 137

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            L              +  + + ++V RML  +    R +  + ++  EF Y + QAYD 
Sbjct: 138 ELTFNDRWLGPLTFADVVRLAARYTVARMLERDDFARRYREGRPIAIHEFLYPLAQAYDS 197

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSG 243
           V +       +++GG+DQ  N++ G ++          AL  PLL  T    KM K+L  
Sbjct: 198 VAVR----ADVELGGTDQKFNLLVGREIQREYGQEPQVALLMPLLEGTDGKEKMSKSLGN 253

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKK 300
            I + +    P   +    +I D  +V +    T L M+EI R+ +          +AK 
Sbjct: 254 YIGIAEP---PGQMFGKTMSIPDELIVKYMILATDLDMAEIRRLEQGMAAGTVNPRDAKL 310

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A  +  M HG+  A+ A    +  F        MP +++    +      + L+  AG
Sbjct: 311 RLAHALVRMYHGKAAADAAQEEFLRVFSRHQLPAEMPEVTLPVPRLDA----VQLLRVAG 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A S +EARR ++  A++++   +++ + ++   D        L  GK+      +
Sbjct: 367 MAPSNSEARRLIEQGAVRLDGRRVASPQEELAPAD-----GAVLQVGKRRFARLRV 417


>gi|114331532|ref|YP_747754.1| tyrosyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|114308546|gb|ABI59789.1| tyrosyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 406

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 98/418 (23%), Positives = 167/418 (39%), Gaps = 24/418 (5%)

Query: 4   FKSDFLSILS--ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
                +  L   +RG    +        L     +    G+D TA  LH GH   L  L 
Sbjct: 1   MSESIIHQLQVIKRGCQELLIEEELTQKLTKNQPLRIKAGFDPTAPDLHLGHTVLLNKLR 60

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GH  + L+G  T +IGDPS ++ +R  +  ++I +N E         +K      
Sbjct: 61  QLQELGHHILFLIGDFTGMIGDPSGKNATRPPLTCEQIAQNAETYTSQVFKILKP----E 116

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N TW+        L  + S ++V RML  +    R    + ++  EF Y ++Q 
Sbjct: 117 QTEVVFNSTWMDKFSA-ADLVRLASTYTVARMLERDDFSKRYHENRPIAIHEFLYPLVQG 175

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKT 240
           YD V L       L++GG+DQ  N++ G +L +         LT PLL    G  KM K+
Sbjct: 176 YDSVALK----TDLELGGTDQKFNLLVGRELQKHYGQSPQCILTMPLLEGLDGIQKMSKS 231

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEA 298
           L+  + +N+   SP   +    +I D  +  + + L+   +  I +       G+   + 
Sbjct: 232 LNNYVGINE---SPTEMFGKLMSISDTLMWRYIELLSFESLDTIHQWQLEVEAGRNPRDI 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K   A EI    H R  A +A       F        +P   +        +    L+  
Sbjct: 289 KVQFAQEIVARFHSRTAAIQATEDFDARFRKGAIPDDIPEKKLYVQ--GTELAAPQLLKL 346

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            G   ST+EA R ++   +K+N + +S++   + +        +    GK+      L
Sbjct: 347 TGLTASTSEALRMIEQGGVKLNGNKVSDKTQTVPV-----NTTVIAQVGKRKFAKIIL 399


>gi|288553779|ref|YP_003425714.1| tyrosyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544939|gb|ADC48822.1| tyrosyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 414

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 189/413 (45%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +RG +  I+   EL     +       +   +G D +A  +H GH   L  L   Q+
Sbjct: 20  EILKRGVVE-ITPEHELKKKIEKSVRTGKPLKVKLGMDPSAPDVHLGHTVPLHKLRQFQE 78

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   L+G  T  IGDP+ + E+R+ +  ++++ N       +   +        A +
Sbjct: 79  LGHEIQMLIGDFTGRIGDPTGKSETRKQLSDEDVKRNAMTYVEQYGKILD----MEKATI 134

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL ++ + D++    +  +V RML  +    R K  Q +S  EF Y ++Q YD V
Sbjct: 135 YYNSEWLKALSFEDVIGLSANM-TVARMLERDDFEKRYKSGQPISIHEFFYPLMQGYDSV 193

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK-MGKTLSGA 244
            L    +  +++GG+DQ  N++ G  L E     K  A+T PL+    G + M K+L+  
Sbjct: 194 AL----ESDIEVGGTDQKFNLLMGRTLQEAYGKEKQVAMTLPLIEGLDGERKMSKSLNNY 249

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           I +++   SP   +    +I D  ++ + K  T +PM EI   +   K       +AK  
Sbjct: 250 IGIDE---SPNEIFGKSMSIPDELMIKYYKLATDIPMDEINALEEGIKNGSVHPRDAKMN 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +  +   M HG++ A++A +     F        +P +  S ++    + ++ L+V+   
Sbjct: 307 LGAKFVEMYHGKDAADEAKSYFQTVFQKRTLPTDIPEVKWSGEDA---VWVVELLVELKM 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +S  EARR +++  +K+N   + + + QIK++D      + +  GK+     
Sbjct: 364 MSSKGEARRMVQNGGVKVNEEKVEDVQAQIKIED-----GLIVQVGKRKFAKL 411


>gi|186477308|ref|YP_001858778.1| tyrosyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184193767|gb|ACC71732.1| tyrosyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 432

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 99/413 (23%), Positives = 188/413 (45%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 41  EVTKRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 100

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          + 
Sbjct: 101 GHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRA----KTEIR 156

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V 
Sbjct: 157 YNSEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVA 215

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L    +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    +
Sbjct: 216 L----NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYV 271

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            ++++   P + +    +I D  +  + + L+  PMSEI+  +     G+   + K ++A
Sbjct: 272 GISEK---PNDMFGKLMSISDVLMWRYFELLSFRPMSEIEGFKREIDGGRNPRDFKVLLA 328

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A                +PT++++       + +  L+ +AG   
Sbjct: 329 QEIVARFHSQADAERALEDFN-HRAKGGVPDDIPTVTLA----GAPLAIGQLLKQAGLVP 383

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L
Sbjct: 384 STSEALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTL 430


>gi|184201190|ref|YP_001855397.1| tyrosyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581420|dbj|BAG29891.1| tyrosyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 436

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 214/420 (50%), Gaps = 12/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S     L+ RG I   ++P+ L        +T Y G+D TASSLH GHL QL+LL  LQ 
Sbjct: 16  SSLWEELNWRGLIQISTDPQALQEALDGEPITYYCGFDPTASSLHLGHLVQLLLLRRLQL 75

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L+GG T +IGDP  +   R +   + + + ++ ++     F+ +  G   A M
Sbjct: 76  AGHHPIGLVGGSTGLIGDPR-QTSERILNSRETVAQWVDMLREQVQRFLSFE-GANPARM 133

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR+IG  F V  M+  + V  RL  E+ +S+ EF+Y ILQ  DF+
Sbjct: 134 VNNLDWTSQLSAIDFLRDIGKNFRVGTMIKKDIVAKRLNSEEGISYTEFSYQILQGLDFL 193

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + YDC LQ GGSDQWGN+  G DL  + +   + A+ +PL+T + GTK GK+   AI
Sbjct: 194 NLYRQYDCVLQTGGSDQWGNLTSGTDLVRKTEGAAVHAIGTPLITNSDGTKFGKSEGNAI 253

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E+TSPY F+Q+W N  DADV    K  T     EI  + +   +     EA++++A
Sbjct: 254 WLDPELTSPYAFYQFWLNTADADVADRLKVFTFRTREEIAELERLTREEPHRREAQRVLA 313

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG--------LLTL 355
            ++ T+VHG +  ++A  A+   F          +   +  E   G          ++ L
Sbjct: 314 ADVNTLVHGEQATQQAVEASAAVFGRGSFEDLDASTLAAVAEALPGATVPGGTQHAVVDL 373

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G + S + ARR LK   + +NN  +  E   +   D        L  GKKN     
Sbjct: 374 LVATGLSDSKSAARRTLKEGGVSLNNRKVQGEDAVVSPGDLLHGRFALLRRGKKNLAAVT 433


>gi|311103888|ref|YP_003976741.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758577|gb|ADP14026.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 409

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 103/412 (25%), Positives = 181/412 (43%), Gaps = 29/412 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 18  IAKRGCDELLVESEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDMG 77

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 78  HNVIFLIGDFTSTIGDPSGRNNTRPPLTREQIESNAKTYYAQASLVLDPA----RTEIRY 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  E    R K    +S  EF Y ++Q YD V L
Sbjct: 134 NSEW-CDPLGARGMIQLASRYTVARMMEREDFTKRFKGGIPISVHEFLYPLMQGYDSVAL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +         LT PLL  T    KM K+    I 
Sbjct: 193 K----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGTDGVEKMSKSKGNYIG 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +++   SP + +    +I D  +  + + L+   + +I   +     G+   +AK ++A 
Sbjct: 249 ISE---SPDSMFGKLMSISDTLMWRYFELLSFRTLEDIAALKQEIDGGRNPRDAKVMLAQ 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H  + A++A  +    F      + MP ++I        +G+L L+ +AG   S
Sbjct: 306 EIITRFHSAKAADEALASFEARFRDGAIPEDMPEVNIG----GAPVGILKLLREAGLVAS 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +EA+R+++   +++N   + ++ LQ+        G   +  GK+     +L
Sbjct: 362 GSEAQRNVEQGGVRVNGDRVEDKSLQLPA------GTYVVQVGKRKFARVNL 407


>gi|81448578|sp|Q8DBX3|SYY2_VIBVU RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
          Length = 396

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 93/420 (22%), Positives = 171/420 (40%), Gaps = 27/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQDLGHDVTFLIGDFTGMVGDPTGKNSTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I +++    P   +    +I D  + S+ + L+  P+ E+ +        K   +
Sbjct: 230 SANNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEELAQFKADVAAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP  +      + G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEFT-----FAAGTPMANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +A   +ST+EA R +K  A K++   + + K +           I    GK+      + 
Sbjct: 342 EAELCSSTSEAMRMVKQGAAKMDGEKVEDAKSRTSP-----LAPIVFQVGKRKFARITIA 396


>gi|60593714|pdb|1VBM|A Chain A, Crystal Structure Of The Escherichia Coli Tyrosyl-Trna
           Synthetase Complexed With Tyr-Ams
 gi|60593715|pdb|1VBM|B Chain B, Crystal Structure Of The Escherichia Coli Tyrosyl-Trna
           Synthetase Complexed With Tyr-Ams
          Length = 318

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 132/318 (41%), Positives = 194/318 (61%), Gaps = 3/318 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 1   NLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+  
Sbjct: 61  GHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFV 185
           NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF 
Sbjct: 121 NNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+
Sbjct: 181 CLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++A
Sbjct: 241 WLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVLA 300

Query: 304 TEITTMVHGREEAEKAAT 321
            ++T +VHG E  + A  
Sbjct: 301 EQVTRLVHGEEGLQAAKR 318


>gi|260775438|ref|ZP_05884335.1| tyrosyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608619|gb|EEX34784.1| tyrosyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 395

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     ++ L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIEKLKENRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQAVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
           + +  I +++    P   +    +I D  + S+ + L+  P+ EI++      +GK   +
Sbjct: 230 SANNYIGISEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEIEQFKASIAEGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       E   G+ +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----EFDAGLPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI++  +++ K   +       G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIDSEKVADSKFAPQA------GKYVFQVGKRKFARITI 394


>gi|194756246|ref|XP_001960390.1| GF11543 [Drosophila ananassae]
 gi|190621688|gb|EDV37212.1| GF11543 [Drosophila ananassae]
          Length = 464

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 129/439 (29%), Positives = 213/439 (48%), Gaps = 29/439 (6%)

Query: 5   KSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I   +    +  L + GV + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QRNLL-ELTDRGFFQGIFPDTAAPRMKQLFTSGVQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI----FSSFIKYG 117
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+      F +  ++ 
Sbjct: 84  HCQRAGHQPIALVGGATGLIGDPSGRKTERNQLGESVIETNLKAIEQQLRQVFENHEQFL 143

Query: 118 TGKTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
                         ++NN  W  +++ ID +  +G  F +  MLS  SV+SRL  E  +S
Sbjct: 144 WDTRKNPSPLPPLTIVNNADWYKNLQIIDFVANMGRHFRMGSMLSRSSVQSRLDSEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           T   G K GK+   A+WL+   TSP+  +Q++  + D+ V    +  T +P+ EI+++ +
Sbjct: 264 TNEEGDKFGKSAGNAVWLDANKTSPFALYQFFLRMADSKVEKLLRLFTFIPLPEIEQLMR 323

Query: 290 LQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKD-- 344
                 E  +A+ ++A ++T +VHG     +A       +  +      +    I +   
Sbjct: 324 EHTKEPEKRKAQTLLAEDVTLLVHGESGLRQAERVTNALYKGNVEGLAELNYAEIKQTFQ 383

Query: 345 -------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
                      GM +L L + A    +  +A R + +    +N   + N    I      
Sbjct: 384 GATVVDLLTEPGMSVLQLAMNAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVITAGIHI 443

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GK+N  I  
Sbjct: 444 LRNGVSLLRVGKRNFYIVR 462


>gi|118497584|ref|YP_898634.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|195536282|ref|ZP_03079289.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|118423490|gb|ABK89880.1| tyrosyl-tRNA synthetase [Francisella novicida U112]
 gi|194372759|gb|EDX27470.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 396

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 177/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKNKRLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +      
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 116 -KTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L ++        +T PLL       KM K
Sbjct: 174 GYDSVAM----NADIELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +         +
Sbjct: 230 SSQNYIGIEEP---ANEIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKGDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+      +
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNNVFQVGKRKFAKIII 395


>gi|226354815|ref|YP_002784555.1| tyrosyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226316805|gb|ACO44801.1| putative Tyrosyl-tRNA synthetase (Tyrosine-tRNA ligase)
           [Deinococcus deserti VCD115]
          Length = 411

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/422 (23%), Positives = 173/422 (40%), Gaps = 23/422 (5%)

Query: 1   MPAFKSDF-----LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M   +S+      + IL  RG +  +S       L     +   +G D T   LH GH  
Sbjct: 1   MNEIRSNVPVAEQIEILK-RGVVDLVSEDDLRRKLEKGEPLRVKLGADPTRPDLHLGHAV 59

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +   Q  GHK I L+G  T++IGDPS + ++R  +  QE + N +         ++
Sbjct: 60  ILRKMRQFQDLGHKVIMLIGDFTAMIGDPSGKSKTRPPLTLQETRANAQSYLDQCRLILR 119

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                 +  +  N  WL  + Y D++  + S ++V R+L  +    RL     +S  E  
Sbjct: 120 QEPEVLE--LRFNSEWLEPLGYADII-RLTSRYTVARILERDDFTKRLNAGTPISMHELL 176

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASG 234
           Y + Q YD V L       +++GG+DQ  N + G  L           +T PLL      
Sbjct: 177 YPLTQGYDSVALH----ADVELGGTDQLFNNLVGRALQRDYDQEPQVVITLPLLVGLDGT 232

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            KM K+L   I L      P+  +     + D  + ++   LT LP   I+ +       
Sbjct: 233 EKMSKSLDNYIGLT---DEPHAMFAGLMKVPDPLLDNYFTLLTDLPRERIEELLAGHPVA 289

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGL 352
              A + +A E+   +H   + + A           I  Q++P +++ + ++     + L
Sbjct: 290 ---AHRELAREVVAWLHPGADLDAAEERFKAVAKGGIP-QNIPQVTVPESDLDAEGRISL 345

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+V AG   S   AR+ +++  +K+N    ++ +  +  +   S G + +  GK    
Sbjct: 346 ARLVVLAGLEPSNGAARKLIQNRGLKLNGETCADPQGYLTREALASEGGMVIQKGKDRFA 405

Query: 413 IC 414
             
Sbjct: 406 RL 407


>gi|207742346|ref|YP_002258738.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|206593736|emb|CAQ60663.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
          Length = 433

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 181/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 43  EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 102

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 103 GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 158

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 159 YNSEW-SDPLGARGMIQLAARYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 217

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 218 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 273

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
            + +    P   +    +I D  + ++   L+  PM+EI+RM +     +   + K ++A
Sbjct: 274 GIAEV---PGEMFGKLMSISDDLMWTYFTLLSFRPMAEIERMKQEVALGRNPRDCKVLLA 330

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 331 QEIIARFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPLGIAQLLKQAGLCP 385

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 386 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 433


>gi|83749319|ref|ZP_00946316.1| Tyrosyl-tRNA synthetase tyrS [Ralstonia solanacearum UW551]
 gi|83723997|gb|EAP71178.1| Tyrosyl-tRNA synthetase tyrS [Ralstonia solanacearum UW551]
          Length = 392

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 181/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 2   EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 62  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 118 YNSEW-SDPLGARGMIQLAARYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 177 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 232

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
            + +    P   +    +I D  + ++   L+  PM+EI+RM +     +   + K ++A
Sbjct: 233 GIAEV---PGEMFGKLMSISDDLMWTYFTLLSFRPMAEIERMKQEVALGRNPRDCKVLLA 289

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 290 QEIIARFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPLGIAQLLKQAGLCP 344

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 345 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 392


>gi|295696870|ref|YP_003590108.1| tyrosyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412472|gb|ADG06964.1| tyrosyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 413

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 175/412 (42%), Gaps = 29/412 (7%)

Query: 13  SERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             RG    +     ++ +     S   +   +G D TA  +H GH   L  L   Q  GH
Sbjct: 21  IRRGAAEIVPEEELVEKVRRSVSSGKPLRVKLGLDPTAPDIHLGHTVVLQKLRQFQDLGH 80

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   ++G  T  IGDP+ + E+RR +  ++++ N +  +      +  G       ++ N
Sbjct: 81  EVYLVIGDFTGRIGDPTDKSETRRQLTEEQVRANAKTYEEQLFKVLDPG----RTHVVFN 136

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TWL  + + +++R   S  +V RML  E    R      +S  EF Y ++Q YD V L 
Sbjct: 137 STWLAPLTFAEVIRLAAS-TTVARMLEREDFHKRFYGNLPISLHEFFYPLMQGYDSVALR 195

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G  L +     +  A+  PLL       KM K+L   I L
Sbjct: 196 ----ADVELGGTDQKFNLLMGRTLQKEFGQSQQAAVMVPLLEGLDGEKKMSKSLGNYIGL 251

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIAT 304
           +     P + +    +I D+  V + +  T L   E+DR+     +      +AK  +A 
Sbjct: 252 D---DPPRDMYGKAMSIPDSLTVKYFELATDLSNDELDRLKGDLTEGRLHPRDAKMRLAK 308

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +  M HG   AE A       F        +    I        + ++ L+V+ G A S
Sbjct: 309 TLVRMYHGPNAAEDAEHHFRTIFQERQLPSDIEERQIP----PGPVWIVRLLVENGLAGS 364

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EARR ++   +++++  I +   +I+ ++      + +  GK+  +   +
Sbjct: 365 NGEARRLIEQGGVRVDDERIDSPDREIEPRE-----GMVVQVGKRRFLRFRI 411


>gi|309799396|ref|ZP_07693636.1| tyrosyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116984|gb|EFO54420.1| tyrosyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 371

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 137/367 (37%), Positives = 204/367 (55%), Gaps = 11/367 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K          A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKRFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I +  +  +          + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENHNIVELLVS 360

Query: 359 AGFATST 365
           +G   S 
Sbjct: 361 SGVVNSK 367


>gi|302877605|ref|YP_003846169.1| tyrosyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302580394|gb|ADL54405.1| tyrosyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 399

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 177/419 (42%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L ++  RG    +        L     +    G+D TA  LH GH   L  +
Sbjct: 1   MNDM-TQVLDVIK-RGADELLIEAELKQKLALGRPLRIKAGFDPTAPDLHLGHTVLLNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH  + L+G  T +IGDP+ ++ +R  +  +++ EN +  +      +      
Sbjct: 59  RQLQDLGHHALFLIGDFTGMIGDPTGKNATRPPLSREQVLENAQSYRDQVFKVLDP---- 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N TW+     +DL+R   +  +V +ML  +    R K  Q ++  EF Y ++Q
Sbjct: 115 EKTEIVFNSTWMDKFSAVDLIRLAATH-TVAQMLERDDFAKRYKGGQPIAIHEFIYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       L++GG+DQ  N++ G ++      P    LT PLL       KM K
Sbjct: 174 GYDSVALK----ADLELGGTDQKFNLLMGREMQRHYGQPAQCILTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +L   I +     +P + +    +I D  +  + + L+   +SEI         G+   +
Sbjct: 230 SLGNYIGIT---DAPQDMFGKLMSISDVLMWRYLELLSFRSLSEIASWRAEVEGGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +AE A       F   +    MP ++++  +    + L  L+ 
Sbjct: 287 IKVLLAQEIVARFHSQRDAEAALEEFDARFRKGVLPDDMPEMTVAAPDGVISVPL--LLR 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG    T+EA R +   A+K++   ++++   +          +    GK+      +
Sbjct: 345 QAGLVDGTSEAMRMIVQGAVKLDGERVNDKGDTVAA-----GRVVVAQVGKRKFARITV 398


>gi|254253229|ref|ZP_04946547.1| Tyrosyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895838|gb|EAY69718.1| Tyrosyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 460

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 182/411 (44%), Gaps = 30/411 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 72  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 131

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 132 VIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLD----REKTEIRYNS 187

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 188 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL-- 244

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 245 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 302

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   M EI   +     G+   + K ++A EI
Sbjct: 303 EK---PNDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFKREAESGRNPRDFKVLLAQEI 359

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 360 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 414

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R+++   +KI+ + +S++ L++        G   +  GK+      L 
Sbjct: 415 EALRNIEQGGVKIDGATVSDKGLKV------DAGEYVVQVGKRRFARVTLS 459


>gi|297170882|gb|ADI21900.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_26L16]
          Length = 405

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 181/424 (42%), Gaps = 28/424 (6%)

Query: 1   MPAFKS-----DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M   K+     + L+ L  RG    +     L+ L S   +   +G+D TA  LH GH  
Sbjct: 1   MTKSKNKSAFQEVLAELK-RGVEEMLLEEELLERLASNRPLRIKVGFDPTAPDLHLGHTV 59

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  +   Q+ GH+ + L+G  T +IGDPS ++ +R  + ++EI+ N    K      + 
Sbjct: 60  IINKMRQFQELGHEVVFLIGDFTGMIGDPSGKNVTRPPLTTEEIESNAVTYKAQVFRILD 119

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N  W   +   + +  + S  +V RML  +    R K  Q ++  EF 
Sbjct: 120 PD----KTQVEFNSKWCSELGA-EGIIRLASRHTVARMLERDDFSKRYKSGQPIAIHEFL 174

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASG 234
           Y ++Q YD V L       ++MGG+DQ  N++ G +L ++   P    +T PLL      
Sbjct: 175 YPLMQGYDSVALK----TDVEMGGTDQKFNLLVGRELQKQYGQPSQVVITLPLLEGLDGV 230

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQG 292
            KM K+L   + +     +P + +    +I D  +  + + L+   + EI+  R +   G
Sbjct: 231 QKMSKSLGNIVGIT---DAPDDMFGKLMSISDDLMWRYFELLSFKSLPEIEKLRESVGSG 287

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
               + K  +A EI    H     +KA    +E F        +   ++  D    G+G+
Sbjct: 288 ANPRDVKFELAREIVDRFHAPGGGKKAEQRFVERFSQGSVPDDLEEKALLSD--GDGLGI 345

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + I +AG ATST+EA R +K  A++     + + K  +            L  GK+   
Sbjct: 346 ASAIKQAGLATSTSEAIRLIKQGAVRFAGERLEDPKTVLAP-----GTKGVLQVGKRRIA 400

Query: 413 ICHL 416
              +
Sbjct: 401 KVRI 404


>gi|332286792|ref|YP_004418703.1| tyrosyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330430745|gb|AEC22079.1| tyrosyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 409

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 176/414 (42%), Gaps = 29/414 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 18  IAKRGCDELLVESEFAKKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLG 77

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  + +++IQEN +      S  +      +   +  
Sbjct: 78  HTVIFLIGDFTSMIGDPSGRNATRPPLTAEQIQENAKTYYAQASLVLDP----SRTEIRY 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  E    R K    +S  EF Y ++Q YD V L
Sbjct: 134 NSEW-CDPLGARGMIQLASRYTVARMMEREDFTRRFKGGIPISVHEFLYPLMQGYDSVAL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +         LT PLL  T    KM K+    I 
Sbjct: 193 K----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLEGTDGVDKMSKSKGNYIG 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           + +    P + +    +I D  +  + + L+   M +I ++           + K ++  
Sbjct: 249 ITEA---PESMFGKLMSISDTLMWKYYELLSFRSMDDIAQLQNQVKSGMNPRDVKVMLGQ 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H ++ A  A  +    F      + MP + +        +G+L ++ +AG   S
Sbjct: 306 EIVARFHTQQAAHDALASFEARFRDGAIPEDMPEVQLGAA----PLGILKVLREAGLVAS 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R+++   ++++   I ++ LQ+        G   +  GK+      L G
Sbjct: 362 GAEAQRNVEQGGVRVDGDRIEDKSLQLPA------GTYVVQVGKRKFARVTLTG 409


>gi|167564069|ref|ZP_02356985.1| tyrosyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571213|ref|ZP_02364087.1| tyrosyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 413

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 99/410 (24%), Positives = 183/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLAKSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI +       G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIAQFRAEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H R EAE+A                +PT++++       + +  L+ +AG   ST+
Sbjct: 313 VERFHSRAEAERALEDFN-HRAKGGVPDDIPTVTLT----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVEAGEF------VVQVGKRRFARVTL 411


>gi|145590060|ref|YP_001156657.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048466|gb|ABP35093.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 410

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 181/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +     +  L     ++  +   +G D TA  +H GH   L  L  LQ  
Sbjct: 20  EVTKRGCDELLVEADWVQKLARSQATKTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I L+G  TS+IGDPS R+ +R  + ++EI  N E      S  +      +   + 
Sbjct: 80  GHTVIFLIGDFTSMIGDPSGRNATRPPLTAEEIAVNAETYYRQASMVLDP----SKTEVR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ +  +V RML  +    R +    +S  EF Y ++Q YD V 
Sbjct: 136 YNSEW-SDPLGARGMIQLAAKHTVARMLERDDFTKRYRSGVPISIHEFLYPLMQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L           LT PLL       KM K+    I
Sbjct: 195 LK----SDLELGGTDQKFNLLVGRELQREHGQEPQCILTMPLLVGLDGVEKMSKSKGNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
            +++      + +    +I D  +  +   L+  PMSEID M +      N  + K ++A
Sbjct: 251 GISEP---AGDMFGKLLSISDDLMWDYFTLLSFRPMSEIDLMKQEVAAGRNPKDCKVLLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H +  AEKA                +P +++S       MG+ +L+  AG A 
Sbjct: 308 QEIVARFHSQAAAEKALEDFN-HRAKGGVPDDIPEVNLS----GAPMGIASLLKAAGLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++ N +KI+   I++++L+I+       G   +  GK+      L 
Sbjct: 363 STSEAMRNIEQNGVKIDGVTIADKQLKIET------GAYVVQVGKRKFAKVTLS 410


>gi|257893804|ref|ZP_05673457.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257830183|gb|EEV56790.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 407

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 141/411 (34%), Positives = 207/411 (50%), Gaps = 15/411 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +              T    +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLFGKDANIT---FV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +      + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           IWL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+          E  EA++ +
Sbjct: 237 IWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSR-GMGLLTLI 356
           A E+T  VH  E+ ++A       F  +I   +   I      +   E+S     ++ L+
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           V      S  +AR  + + AI IN   +++    I   D      + +  G
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKG 407


>gi|261856719|ref|YP_003264002.1| tyrosyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837188|gb|ACX96955.1| tyrosyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 402

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 181/419 (43%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L  +  RG    +     ++ L S   +    G+D TA  LH GH   +  L
Sbjct: 1   MDNRLTTALEEIR-RGAEEILLEQDLVERLKSGRTLRIKAGFDPTAPDLHLGHTVLINKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH  + L+G  T +IGDP+ +  +R  +  +++QEN +  +      +      
Sbjct: 60  RQFQQMGHHILFLIGDFTGMIGDPTGKSATRPTLTREQVQENAKTYQRQIFKILDPD--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N TW+ ++   DL+  + S  +V RML  +    R    Q ++  EF Y ++Q
Sbjct: 117 -KTEIVFNSTWMGAMTAADLIE-LASRQTVARMLERDDFSKRYTGHQPIAIHEFLYPLVQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L ++   P+   +T PLL       KM K
Sbjct: 175 GYDSVALK----ADVELGGTDQKFNLLMGRELQKQYGQPQQTVITMPLLEGLDGVQKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P   +     I D  +  +   L+  P+ EI   R     G+   +
Sbjct: 231 SLGNYIGIEEV---PDEQFGKLMKISDELMWRYFDLLSFRPLVEIKKLRAEMQAGRNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    HG     +A    +  F  S     +P   +       G+G+   + 
Sbjct: 288 IKFELAMEIVDRFHGVGSGAEARERFIARFAKSEIPDDLPEHDLPA-----GLGVAQALK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + G   ST+EA RH+K+ A+++   ++ ++   ++  +F       +  GK+     ++
Sbjct: 343 EIGMVASTSEAFRHMKAGAVRLGGEVVDDKGAVLEAGEF------IIQVGKRRIAKINV 395


>gi|167580608|ref|ZP_02373482.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 413

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + + 
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIG 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI   R     G+   + K ++A EI
Sbjct: 256 EK---PNDMFGKLMSISDVLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +PT++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPTVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|161723158|ref|YP_441787.2| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618714|ref|ZP_02387345.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257137954|ref|ZP_05586216.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|115305799|sp|Q2SZ62|SYY_BURTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 413

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + + 
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIG 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI   R     G+   + K ++A EI
Sbjct: 256 EK---PNDMFGKLMSISDVLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +PT++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPTVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|83653807|gb|ABC37870.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 489

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 101 KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 160

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 161 VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 216

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 217 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 273

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + + 
Sbjct: 274 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIG 331

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI   R     G+   + K ++A EI
Sbjct: 332 EK---PNDMFGKLMSISDVLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVMLAQEI 388

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +PT++++       + +  L+ +AG   ST+
Sbjct: 389 VARFHSQADAERALEDFN-HRAKGGVPDDIPTVTLA----GAPLAIGQLLKQAGLVPSTS 443

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 444 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 487


>gi|167837841|ref|ZP_02464724.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 413

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 184/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI +   A   G+   + K ++A EI
Sbjct: 256 EK---PNDMFGKLMSISDVLMWRYFELLSFRSLDEIAQFRGAIEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQTDAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|325288452|ref|YP_004264633.1| tyrosyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963853|gb|ADY54632.1| tyrosyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 413

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 99/407 (24%), Positives = 185/407 (45%), Gaps = 31/407 (7%)

Query: 19  HQISNPRELDI-----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I    EL       L     +   +G D TA  +H GH   L  +   Q  GH+ + +
Sbjct: 23  AEIVPVEELRNKIKNSLQKNKPLRIKLGLDPTAPDIHLGHTVPLYKMKQFQDLGHQAVII 82

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T+ IGDPS + E+R+ M  +++Q N +  K      +          +  N +WL 
Sbjct: 83  IGDFTAKIGDPSGKSETRKPMTEEQVQHNAQTYKEQIFKILDPD----KTRVEFNSSWLS 138

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++ +   + ++ S  +V RML  +    R   E+ +S  EF Y ++Q YD V L      
Sbjct: 139 NMTF-SDVIKLASCTTVARMLERDDFAKRYAEERPISIHEFFYPLMQGYDSVALQ----A 193

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L +        ALT+P+L       KM K+L   I + +   
Sbjct: 194 DVELGGTDQKFNLLMGRTLQKEFGQEPQVALTTPILEGLDGVHKMSKSLGNYIGVYEA-- 251

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
            P   +    ++ D  ++ + + +T +P+ +I R+ +          + K  +  EI  +
Sbjct: 252 -PREMFGKTMSMPDEIMIRYFELITAVPVLDIRRLEQGLQDGSVHPRDLKMRLGWEIVHI 310

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG-LLTLIVKAGFATSTNEA 368
            HG+++A++A    ++ F        MP ISI++  +  G+  +++++V AG   S  EA
Sbjct: 311 YHGKKQADEAKEEFIKMFQRKEAPDEMPEISIAQIGLESGVTDMVSILVSAGLVPSRGEA 370

Query: 369 RRHLKSNAIKINNSIISNEKLQ--IKLQDFDSTGNIKLSFGKKNHII 413
           RR ++   ++IN+  +S  +    I   D        +  GK+  + 
Sbjct: 371 RRLIEQGGVRINDEKVSQAQSSPRINPGD-------VIKVGKRKFVK 410


>gi|134294761|ref|YP_001118496.1| tyrosyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134137918|gb|ABO53661.1| tyrosyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 413

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 182/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFDQAALVLDRD----KTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQSGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI   R     G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFRREAEGGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKGLKVDAGEF------VVQVGKRRFARVTL 411


>gi|260893540|ref|YP_003239637.1| tyrosyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865681|gb|ACX52787.1| tyrosyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 405

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 95/412 (23%), Positives = 177/412 (42%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L +RG    I+    +  L     +   +   +G D TA  +H GH   L  L   Q+ G
Sbjct: 10  LIKRGVAEIITEEELVRKLERSLATGVPLNVKLGLDPTAPDIHLGHTVVLQKLRHFQELG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I ++G  T+ IGDP+ + E+R+ +  +E+  N    K      +          ++ 
Sbjct: 70  HRTIIVLGDFTARIGDPTGKLETRKQLSEEEVLANARTYKEQIFKVLDP----EKTEIVF 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL  + + ++++ + + ++V RML  E    R +    +S  EF Y ++Q YD V L
Sbjct: 126 NSTWLAPLTFAEVIK-LAAHYTVARMLEREDFSKRFRAGLPISIHEFFYPLMQGYDSVVL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G  L E        A+ +P+L       KM K+L   + 
Sbjct: 185 R----ADVELGGTDQRFNLLMGRTLQEAYGQEPQVAIMTPILEGLDGVQKMSKSLGNYVG 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIA 303
           +      P   +    ++ D  +  + + +T +P   +  I++  K       +AK ++A
Sbjct: 241 VT---DPPEEMYGKLMSLPDELIARYLRLVTDVPEEEIERIEQEMKEGELNPRDAKMLLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFA 362
             +    H  E A KA    +  F        +P   +  +    G + L  L+  +G  
Sbjct: 298 RTVVKRFHSEEAAAKAEEEFIRVFRHRELPSEIPEFPLPSELREGGPIPLFRLLFLSGLV 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S +EARR +    +++N   I++ +  IK +       + L  GK+  +  
Sbjct: 358 PSLSEARRLISQGGVRVNEEKITDPQAPIKPR-----PGMVLRAGKRRFVRL 404


>gi|301633473|gb|ADK87027.1| tyrosine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 399

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 150/414 (36%), Positives = 229/414 (55%), Gaps = 19/414 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              D L++L ERG   Q +  +EL  L +QG    Y+G+D TA SLH G+   L +    
Sbjct: 1   MTKDLLALLKERGLFVQANFEKELKQLLNQGSFAFYVGFDPTAPSLHIGNYVLLHVAQIF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH P  L+G GT++IGDP+ R E R+MM  + I EN   IK     F+      ++ 
Sbjct: 61  QAMGHIPHVLLGSGTALIGDPTGRMELRQMMSRETIAENTRNIKKQIRRFL-----GSNV 115

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +   NETWL  + YI+++RE+G  FSVN+ML+ ++  +R   E+ L+ +E NYM+LQAYD
Sbjct: 116 VFCQNETWLKKLNYIEVIRELGPCFSVNKMLATDAFSARW--ERGLTLMELNYMVLQAYD 173

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y  +LQ+GGSDQW NI+ G DL  R    +++ +T+ LL  A+G KMGK+ SG
Sbjct: 174 FYYLNQKYGVQLQIGGSDQWANILAGADLIRRKTQKQVYGMTTNLLVKANGEKMGKSASG 233

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ + TSPY+F+QYW N+DDA +      LT L    I+ +  L+G  I EAK  +A
Sbjct: 234 ALWLDPQKTSPYDFYQYWINLDDASLQKVFLMLTKLDTKAIETLCNLKGAAIKEAKAKLA 293

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T  +HG + A  A   +   F     ++           V  G  L+ +IV  G   
Sbjct: 294 FELTDAIHGTKAALAAQAKSARIFAFQPDTET--------KTVRAGTRLVDVIVDLGLVV 345

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S +EARR ++   + IN   +++ ++ ++      +  + +  GKK  +   + 
Sbjct: 346 SRSEARRVIQQGGLTINQEKVTDVEMVLQAS----SQPLVIGKGKKRFVTVQVI 395


>gi|291278546|ref|YP_003495381.1| tyrosyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753248|dbj|BAI79625.1| tyrosyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 400

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 104/413 (25%), Positives = 174/413 (42%), Gaps = 31/413 (7%)

Query: 12  LSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L +RG    I            L     +    G+D TA  LH GH   +  L   Q  G
Sbjct: 10  LIKRGTEEIIVEEELKKKIEKSLKEGKPLRVKAGFDPTAPDLHLGHTVLIQKLKHFQDLG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+G  T +IGDP+ + E+R+ +  +E+ +N E  K      +          +  
Sbjct: 70  HQVIFLIGDFTGMIGDPTGKSETRKALSREEVLKNAETYKEQVFKILDP----EKTEVAF 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  +   D+++ + S ++V RML  +    R    + +S  EF Y ++Q YD V L
Sbjct: 126 NSQWMDKMTSYDMIK-LASKYTVARMLERDDFSKRFSTNKPISIHEFLYPLVQGYDSVAL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G DL          A+T P+L       KM K+L   + 
Sbjct: 185 R----ADVELGGTDQKFNLLVGRDLQRDYGQEPQIAITMPILEGLDGVQKMSKSLGNYVG 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIA 303
           + ++   P+  +    +I D  +  +   L+     EI+RM            E KK +A
Sbjct: 241 ITED---PFTMFSKIMSISDELMFRYYLLLSDKSEDEINRMKSDIENGKLHPMEVKKALA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI T  H   +A++A     + F        +P  ++      +G+ L+ +I    F +
Sbjct: 298 AEIVTRFHSTNDAKEAREKFEKLFSKKEIPDDLPEYTL-----EKGLKLIDIIKNINFVS 352

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +E RR     AI IN + + +    I+ ++F       L  GKK      L
Sbjct: 353 SNSEIRRLASQGAIYINGNRVEDIYKIIEDEEF------VLKVGKKKFAKIVL 399


>gi|149927757|ref|ZP_01916009.1| tyrosyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823583|gb|EDM82813.1| tyrosyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 453

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 182/413 (44%), Gaps = 25/413 (6%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +     +  L     +   +   +G D TA  +H GH   L  L  LQ  
Sbjct: 58  DVTKRGCEELLIESEWIQKLVHSEKTGKPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDL 117

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS+IGDPS R+ +R  +  +++QEN +         +          + 
Sbjct: 118 GHQVIFLIGDFTSMIGDPSGRNSTRPPLTKEQVQENAKTYHEQAVKILDPQ----RTAIE 173

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +   D +  + S ++V RML  +    R +    ++  EF Y +LQ YD V 
Sbjct: 174 FNSKWLMPLGA-DGMIRLASSYTVARMLERDDFTKRYQSGTPIAVHEFLYPLLQGYDSVA 232

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAI 245
           L    +  L++GG+DQ  N++ G +L ++        LT PLL  T    KM K+ +  I
Sbjct: 233 L----ESDLELGGTDQKFNLLMGRELQKQNGQSAQCILTMPLLVGTDGVDKMSKSKNNYI 288

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +   +P N +    +I D  + ++   L+   +++I+  + A   G+    AK  +A
Sbjct: 289 GVTE---TPSNMFGKVMSISDELMWNWYTLLSFKSLADIEALKQACASGENPRNAKVALA 345

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+    H  + A  A       F      + MP I +   E     GL  ++  A    
Sbjct: 346 QELVARFHTPQAAVDALNEFEARFKQGALPEDMPEIKLDLPEGDADAGLAWVLKAASLCE 405

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S+++A R+++   +KI++  IS++  ++        G   +  GK+     HL
Sbjct: 406 SSSDANRNIQQGGVKIDSEKISDKATRL------GKGTYVIQVGKRRFAKVHL 452


>gi|40063225|gb|AAR38052.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 400

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 186/419 (44%), Gaps = 23/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP    + L I+  RG    +        L +   +    G+D TA  LH GH   L  +
Sbjct: 1   MPKDIEEQLEIIR-RGCDELLVEKELKKKLSTGIPLRIKAGFDPTAPDLHLGHTVLLNKM 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH    L+G  T +IGDPS ++ +R  +  +++ EN +         +K     
Sbjct: 60  RQLQDMGHHIQFLIGDFTGMIGDPSGKNATRPPLTREQVAENAKTYTDQVFKVLKSDQ-- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+  +   DLL+   +  +V RML  +    R +  Q +S  E  Y ++Q
Sbjct: 118 --TEVAFNSKWMSQLNAADLLKIASTH-TVARMLERDDFGKRYQNNQPISIHELLYPLIQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
           AYD V L       +++GG+DQ  N++ G +L +    P    LT PLL       KM K
Sbjct: 175 AYDSVMLK----ADIELGGTDQKFNLLVGRELQKHFNQPPQCILTMPLLVGLDGVNKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +L+  I +++        +    +I D  +  + + L+   +  I +      QG+   +
Sbjct: 231 SLNNYIGIDEA---AEEIFGKIMSISDELMWQYLELLSFESLVTIRKWKQEIEQGRNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K I A EI    H +++AEK+       F      +++P I +  ++   G+G+  ++ 
Sbjct: 288 IKVIFAKEIVARFHNKQDAEKSIINFEARFKHGAIPENIPEIKLHSED--GGLGITKILK 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++G   ST+EA R ++   +K+N   IS++ L++KL        + +  GK+      +
Sbjct: 346 QSGLTASTSEALRMIEQKGVKLNGEKISDKSLKLKL-----GTTLVIQVGKRRFAKVTI 399


>gi|17545215|ref|NP_518617.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|81506509|sp|Q8Y240|SYY_RALSO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17427506|emb|CAD14024.1| probable tyrosyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 392

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 182/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 2   EVTQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 62  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 118 YNSEW-CDPLGARGIIQLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 177 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 232

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            +++    P   +    +I D  + ++   L+  P++EID  +     G+   + K ++A
Sbjct: 233 GISEA---PNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDLMKQEVTLGRNPRDCKVLLA 289

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 290 QEIIARFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPIGIAQLLKQAGLCP 344

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 345 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 392


>gi|300692496|ref|YP_003753491.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079556|emb|CBJ52234.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 423

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 181/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 33  EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 92

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 93  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 148

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 149 YNSEW-SDPLGARGMIQLAAKYTVARMMERDDFTKRFKAGVPISVHEFLYPLMQGYDSVA 207

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 208 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            +++    P   +    +I D  + ++   L+  P++EID  +     G+   + K ++A
Sbjct: 264 GISEA---PNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDVMKEEIALGRNPRDCKVLLA 320

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 321 QEIVARFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPIGIAQLLKQAGLCP 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 376 STSEANRNIEQGGVKIDGAVISDKGLKVEA------GTFVMQVGKRRFARVVLS 423


>gi|15606818|ref|NP_214198.1| tyrosyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226204|sp|O67632|SYY_AQUAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2984054|gb|AAC07595.1| tyrosyl tRNA synthetase [Aquifex aeolicus VF5]
          Length = 392

 Score =  307 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 182/411 (44%), Gaps = 26/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L I+ E G +  I     L  L     +    G+D TA  LH GH+  L  L   Q+ GH
Sbjct: 7   LRIIKE-GTVEIIEEEELLKKLKEGRPLRVKAGFDPTAPDLHLGHVVLLQKLRQFQQLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   ++G  T++IGDP+ R ++R  +  +++ EN +  +      +          ++ N
Sbjct: 66  EVFFIIGDFTAMIGDPTGRSQTRPPLSREQVLENAKTYEHQVFKVLIP----EKTTVVFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TWL  +     L E+ + ++V RML  E    R K    +   EF Y +LQAYD V + 
Sbjct: 122 STWLEELGT-KGLIELCAKYTVARMLEREDFSKRFKEGIPIYIHEFIYPLLQAYDSVAIK 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G D+           +T PLL  T    KM K+    + +
Sbjct: 181 ----ADVEIGGTDQKFNLLIGRDIQREYGQEPQVCITLPLLVGTDGVRKMSKSYGNYVGI 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            ++   P   +    +I D  +  +   LT     EI++    +     EAKK++A  I 
Sbjct: 237 TED---PKTMFAKIMSIPDEIMWDWFLLLTDYNKEEIEK--MRREMHPMEAKKLLAFTIV 291

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  EEA KA     + F      +  P + +++ ++      +  +VK G   S NE
Sbjct: 292 KRFHSEEEARKAKEWWEKTFSQREFPEDAPLVKLNEKKLRA----VDFLVKIGAVKSKNE 347

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           ARR ++   +KIN   +++   +I++      G +K+  GKK      + G
Sbjct: 348 ARRVIQGGGLKINGEKVTDPNTEIEI-----NGELKVKVGKKKFYRV-VSG 392


>gi|94268046|ref|ZP_01291067.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
 gi|93451751|gb|EAT02515.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
          Length = 411

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 168/408 (41%), Gaps = 27/408 (6%)

Query: 15  RGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    IS       L         +    G+D TA  LH GH   +  +   Q+ GH+ 
Sbjct: 20  RGVEQVISAADLERKLHQAAKENRPLRVKAGFDPTAPDLHLGHTVLVQKMKHFQELGHEI 79

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T +IGDP+ + E+R+ +  +E+  N E  K      +          ++ N  
Sbjct: 80  YFLIGDFTGMIGDPTGKSETRKPLTPEEVAANAETYKEQVFKILDPA----RTRVVFNSV 135

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   D++  + S  +V RML  E  + R   E+++   EF Y ++Q YD V LA  
Sbjct: 136 WLDKLSPRDMI-RLASQLTVARMLEREDFKQRFVNEKAIGIHEFMYPLIQGYDSVALA-- 192

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G DL           LT PLL       KM K+L   I + +
Sbjct: 193 --ADVELGGTDQLFNLLTGRDLQRVWGQEPQVVLTMPLLEGLDGVNKMSKSLDNYIGITE 250

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
              S  + +    ++ D  +  + + L+ L   EI  + +            K+ +A E+
Sbjct: 251 ---SADDIYGKTLSMPDDLMFRYYELLSDLSRVEIADLQQGVSGGKLHPKAVKQRLAREL 307

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               +    A +A       F      + +P ++++         L  L+V AG    T 
Sbjct: 308 VARFYDEPAARRAEDNFERVFKQHQAPEDVPELTLAAG--GEPCWLPRLLVDAGLVKGTG 365

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR +K  A+ I+   ++++   +        G + L  GK+     
Sbjct: 366 EARRLIKQRAVSIDGEKVADDSATVATS-----GEVLLKVGKRRFCRV 408


>gi|77919942|ref|YP_357757.1| tyrosyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|115305812|sp|Q3A220|SYY_PELCD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77546025|gb|ABA89587.1| tyrosyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 408

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 95/415 (22%), Positives = 178/415 (42%), Gaps = 32/415 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +  RG +  +    EL+    +       +    G+D TA  LH GH   +  L   Q  
Sbjct: 10  IIRRGAVEILV-ESELEAKLKKSVETGVPLKVKAGFDPTAPDLHVGHTVLIQKLKQFQDL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   L+G  T +IGDP+ ++E+R+ +  +E+ +N E  K      +          ++
Sbjct: 69  GHEVNFLIGDFTGMIGDPTGKNETRKALTREEVLKNAETYKQQVFKILDP----ERTKVV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N +W+  +   DL+  +   ++V RML  +    R   +Q ++  EF Y ++Q YD V 
Sbjct: 125 FNSSWMGQMSAADLI-GLAGRYTVARMLERDDFHKRFSGQQPIAIHEFLYPLVQGYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L ++        LT PLL       KM K+L   I
Sbjct: 184 LK----ADVELGGTDQKFNLLVGRELQKQEGQVPQCVLTMPLLEGLDGVNKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-----EINEAKK 300
            + +        +    +I D  ++ + + L+ + ++++  +              E+KK
Sbjct: 240 GITEP---AKEVFGKVMSISDELMLRYYELLSDVDLAQLQLVRDGVEGKAGGAHPMESKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A E+    + +  A +A    ++ F        +P + I   E    + +  L+  AG
Sbjct: 297 SLARELVARFYDQAAALRAEEEFVQQFKQKEVPDDIPEVLIDAGE---PVWICRLLTDAG 353

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K  A+K+    I++  L++        G + L  GK+      
Sbjct: 354 LTASNGEARRLVKQGAVKLGGEKIADAGLEVAPA-----GELILQAGKRRFARIK 403


>gi|33598386|ref|NP_886029.1| tyrosyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81426168|sp|Q7W3Z8|SYY_BORPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33574515|emb|CAE39160.1| tyrosyl-tRNA synthetase [Bordetella parapertussis]
          Length = 409

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 177/414 (42%), Gaps = 29/414 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           ++ RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 18  IARRGCDELLVESEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLG 77

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 78  HNVIFLIGDFTSTIGDPSGRNSTRPPLTREQIETNAKTYYAQASLVLDPA----RTEIRY 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  E    R K    ++  EF Y +LQ YD V L
Sbjct: 134 NSEW-CDPLGARGMIQLASRYTVARMMEREDFTRRFKGGVPIAVHEFLYPLLQGYDSVAL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +     +   LT PLL  T    KM K+    I 
Sbjct: 193 K----ADLELGGTDQKFNLLVGRELQKEYGQEQQCILTMPLLVGTDGVEKMSKSKGNYIG 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +++    P + +    +I D  +  + + L+   +++I   +     G+   +AK  +A 
Sbjct: 249 ISEA---PESMFGKLMSISDMLMWRYYELLSFRSLADIAALKAEIDGGRNPRDAKVALAQ 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H  + AE A  A    F      + MP +++         G+L ++ +AG   S
Sbjct: 306 EIVARFHSPQAAEAALAAFEARFRDGAIPEDMPEVTVG----GAPQGILRILREAGLVAS 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +EA+R+++   +++N   + ++ LQ+        G   +  GK+      L G
Sbjct: 362 GSEAQRNVEQGGVRVNGDRVEDKSLQLSA------GTYVVQVGKRKFARVKLVG 409


>gi|134299504|ref|YP_001113000.1| tyrosyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134052204|gb|ABO50175.1| tyrosyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 407

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 101/425 (23%), Positives = 182/425 (42%), Gaps = 28/425 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQ 56
           M  F+      +  RG    +     ++ L     S   +   +G D +A  +H GH   
Sbjct: 1   MLDFQKQL--EIIRRGVAEIVPEEELVEKLKKSVASNKPLHIKLGLDPSAPDIHLGHTVV 58

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  L   Q+ GH    ++G  T  IGDP+ +  +R+ +  +E+  N    +      +  
Sbjct: 59  LQKLRQFQELGHNITIILGDFTGRIGDPTGKSVARKPLTEEEVLANARTYEQQIFKILDP 118

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   +  N TWL  +K+ + + ++ +  +V RML  E    R++    +S  EF Y
Sbjct: 119 ----EKTKVHFNSTWLAPLKF-EDVIKLAATTTVARMLEREDFTKRMRENLPISIHEFFY 173

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT 235
            ++Q YD V L    +  ++MGG+DQ  N++ G  L +        A+  P+L       
Sbjct: 174 PLMQGYDSVAL----EADIEMGGTDQKFNLLMGRTLQKEFGQEPQVAIMMPILEGLDGVN 229

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-- 293
           KM K+L   I +++    P   +    ++ D  +V + + +T +P+ E+  +AK      
Sbjct: 230 KMSKSLGNYIGIDEP---PQEMYGKTMSLPDELMVRYFELVTPVPLEEVKAIAKGLEDGS 286

Query: 294 -EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-G 351
               + K  +  EI T  HG E A +A       F        +    +S D +  G+  
Sbjct: 287 LHPRDVKMRLGREIVTFYHGPEAALQAEDHFKTVFQKGEIPDEIDEFLVSGDLLEEGLVA 346

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  L+ +A  A + +EARR +K  A+KIN    ++  +++K Q+      + +  GK+  
Sbjct: 347 LPKLLTQAKLAGTNSEARRLIKEGAVKINGEKATDPNMRLKPQE-----GMIIRTGKRKF 401

Query: 412 IICHL 416
               L
Sbjct: 402 AKLIL 406


>gi|309389099|gb|ADO76979.1| tyrosyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 426

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 98/422 (23%), Positives = 185/422 (43%), Gaps = 29/422 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           ++ L IL  RG +  + +  +L             +   +G D +A  +H GH   L  L
Sbjct: 24  NEQLKILK-RG-VSDLISEEDLKQKLIEAQKENRPLRVKLGLDPSAPDIHLGHTVVLRKL 81

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   ++G  T +IGDP+ + E+R  +  +E+ EN +  +  FS  +      
Sbjct: 82  KQFQDLGHQVYLIIGDFTGMIGDPTGKSETRNQLTKEEVLENAKTYQEQFSKVLDP---- 137

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  + + D+L  + + ++V R+L  +    R    + +   EF Y ++Q
Sbjct: 138 EKTKVVFNGDWLKEMDFADVLE-LSAHYTVARILERDDFSKRYNAGKPIGIHEFFYPLMQ 196

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +       +++GG+DQ  N++ G  L +         L  PLL       KM K
Sbjct: 197 GYDSVAIK----ADVELGGTDQRFNLLVGRKLQQEYGQKAQVVLMMPLLEGLDGVNKMSK 252

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKEIN 296
           +L   I +      P + +    +I DA ++ + + LT + +   +E+    +       
Sbjct: 253 SLDNYIGVY---DQPADMFGKVMSIPDAMIIRYFELLTDISIAKLNEMKAKLERDDFNPM 309

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTL 355
           E KK +A EI T  H +E A +A       F      + +P I I++ ++  G + ++ L
Sbjct: 310 ELKKQLAAEIVTEYHDQEAAVEARREFESVFSKGNLPEDIPIIEIAEADLDAGELWIVKL 369

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +   G   S ++ARR +K  A+ I++       + ++++D      + +  GK+      
Sbjct: 370 VAATGLVDSNSQARRMIKQGAVSIDDQKYEKINIDLEVKD-----GMIIQIGKRRFAKIK 424

Query: 416 LC 417
           L 
Sbjct: 425 LV 426


>gi|187479433|ref|YP_787458.1| tyrosyl-tRNA synthetase [Bordetella avium 197N]
 gi|114154816|sp|Q2KV13|SYY_BORA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115424020|emb|CAJ50573.1| tyrosyl-tRNA synthetase [Bordetella avium 197N]
          Length = 409

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 102/413 (24%), Positives = 178/413 (43%), Gaps = 29/413 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           ++ RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 18  IARRGCDELLVESEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLG 77

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 78  HTVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEHNAKTYYAQASLVLDPA----RTEIRY 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  E    R K    ++  EF Y ++Q YD V L
Sbjct: 134 NSEW-CDPLGARGMIQLASRYTVARMMEREDFTRRFKTGVPIAVHEFLYPLMQGYDSVAL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +         LT PLL  T    KM K+    I 
Sbjct: 193 K----ADLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGTDGVDKMSKSKGNYIG 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +++   SP + +    +I D  +  + + L+   + +I   +     G+   +AK  +A 
Sbjct: 249 ISE---SPDSMFGKLMSISDTLMWRYFELLSFRSLEDIAALKAEIDAGRNPRDAKVALAQ 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H  ++AE+A       F        +P ++++       MG+L ++  +    S
Sbjct: 306 EIITRFHSAKDAEQALANFEARFRDGAIPDDIPEVNLA----GAPMGILHVLRASSLCAS 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++EA+R ++   +KI+ + I +  LQ+        G+  L  GK+     +L 
Sbjct: 362 SSEAQRAIEQGGVKIDGAKIEDRSLQLNA------GSYVLQVGKRKFARVNLA 408


>gi|91785169|ref|YP_560375.1| tyrosyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|91689123|gb|ABE32323.1| tyrosyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 416

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 181/411 (44%), Gaps = 30/411 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLAKSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRD----KTEIRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGA-DGMIKLASRYTVARILEREDFTRRFQSGVPISIHEFLYPLMQGYDSVAL- 200

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+ +  I +
Sbjct: 201 ---NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P + +    +I D  +  + + L+  PM EI   +     G+   + K ++  E
Sbjct: 258 SEK---PTDMFGKLMSISDVLMWRYFELLSFRPMEEIAGFKKETEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A  A ST
Sbjct: 315 IVARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLAPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 370 SEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTL 414


>gi|53726205|ref|YP_103906.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642310|ref|ZP_00441068.1| tyrosine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121598440|ref|YP_991612.1| tyrosyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124383776|ref|YP_001027108.1| tyrosyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449804|ref|YP_001082053.1| tyrosyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167000498|ref|ZP_02266310.1| tyrosine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167721181|ref|ZP_02404417.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167895847|ref|ZP_02483249.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167920449|ref|ZP_02507540.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217420944|ref|ZP_03452449.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|254178767|ref|ZP_04885421.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202618|ref|ZP_04908981.1| tyrosyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254207957|ref|ZP_04914307.1| tyrosyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254355903|ref|ZP_04972181.1| tyrosyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81604347|sp|Q62HB4|SYY_BURMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52429628|gb|AAU50221.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121227250|gb|ABM49768.1| tyrosyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124291796|gb|ABN01065.1| tyrosine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126242674|gb|ABO05767.1| tyrosine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147746865|gb|EDK53942.1| tyrosyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751851|gb|EDK58918.1| tyrosyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148024878|gb|EDK83056.1| tyrosyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160694681|gb|EDP84689.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|217396356|gb|EEC36373.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|238523438|gb|EEP86876.1| tyrosine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243063553|gb|EES45739.1| tyrosine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 413

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 181/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLAKSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|15834952|ref|NP_296711.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285124|ref|ZP_06194518.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|301336519|ref|ZP_07224721.1| tyrosyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|14195229|sp|Q9PKX8|SYY_CHLMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7190374|gb|AAF39195.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 412

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 139/424 (32%), Positives = 222/424 (52%), Gaps = 25/424 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L +RG +   S    L+ L +   V+AY+G+D TA SLH GH   +  L  L 
Sbjct: 1   MQQLIDSLQKRGILDNSS--AGLESLTA--PVSAYLGFDPTAPSLHIGHWIGICFLRRLS 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  PI+L+GG T +IGDPS +   R ++  +++ +N +KI+   ++++       D  
Sbjct: 57  AYGITPIALVGGATGMIGDPSGKSVERSLLDQEQVLDNSKKIEVALANYLP------DIR 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL S+  +D LR+IG +F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF
Sbjct: 111 IVNNADWLGSLSMVDFLRDIGKYFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K++   LQ GGSDQWGNI  GID   R    + F LT PLLT + G K+GKT SG 
Sbjct: 171 AHLFKHHGVVLQCGGSDQWGNITSGIDYIRRKGLGQAFGLTYPLLTDSKGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E+TSPY  +QY+  + D ++   A+ LT L   E+  + K    +    K+ +A 
Sbjct: 231 VWLDPELTSPYELFQYFLRLSDQEIPKIARMLTLLDDDEVLALDKRLENDPQAVKRYVAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL------------ 352
            I   VHG E   +A       F      +++    ++   V  G+G+            
Sbjct: 291 VIVKDVHGAEGLAQALATTESFFANKG--KNITESELA-ALVQSGVGINVARADVIGKRW 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L ++V+ GF +S  EARR ++   + +N   + +E+  +          I LS GKK   
Sbjct: 348 LDVVVQLGFCSSKGEARRLIQQRGLYVNQEPLIDEQSVLDGTYLCFDRYILLSQGKKKKQ 407

Query: 413 ICHL 416
           +  L
Sbjct: 408 VIDL 411


>gi|297170828|gb|ADI21848.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_25M15]
          Length = 404

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 104/423 (24%), Positives = 191/423 (45%), Gaps = 25/423 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K   L I  +RG    +     L+ L     +   +G+D TA  LH GH   +  +
Sbjct: 1   MTSNKEQILEI--KRGVDEILVEKDFLEKLKKNKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++++EN    K      +      
Sbjct: 59  RQFQEFGHEVIFLIGDYTGMIGDPSGVNETRPVLTIEQVKENARTYKNQIFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +   +L+ +I S ++V RML  +  + R K E  +S  EF Y ++Q
Sbjct: 116 -KTRIEFNSSWMNKVTSAELI-DIASKYTVARMLERDDFKKRFKSENPISIHEFIYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +C ++MGG+DQ  N++ G  L +         +T PLL       KM K
Sbjct: 174 GYDSVAL----ECDVEMGGTDQKFNLLVGRHLQQLYGQEPQTIITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           + +  + LN    S  + +    +I D  +  + + +++  + EI   + +   G    +
Sbjct: 230 SANNYVALN---DSGDDMFGKIMSISDDLMWRYFELVSSKDLKEIKNLKDSVNDGVNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR---GMGLLT 354
            K ++A EI    H +  A+KA  + M+ F      + +    +S  ++      + L  
Sbjct: 287 IKFLLAEEIVERFHNQSIAKKAKESFMQRFQKGGIPEDIDFTEVSIKDIQNDDGEINLPR 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+       S ++  R +K+ +++I+   IS   L+I+     +   + LS GK+  I  
Sbjct: 347 LLAHTNLVNSISDGHRAIKAGSVRIDGEKISQISLEIQ-----NKSELVLSQGKRRFIKV 401

Query: 415 HLC 417
            + 
Sbjct: 402 KII 404


>gi|300705146|ref|YP_003746749.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072810|emb|CBJ44165.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 423

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 181/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 33  EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 92

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 93  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 148

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 149 YNSEW-SDPLGARGMIQLAARYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 207

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 208 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
            + +    P   +    +I D  + ++   L+  PM+EI+ M +     +   + K ++A
Sbjct: 264 GIAEA---PGEMFGKLMSISDDLMWTYFTLLSFRPMAEIEMMKQEVALGRNPRDCKVLLA 320

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI +  H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 321 QEIISRFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPIGIAQLLKQAGLCP 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST++A R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 376 STSDANRNIEQGGVKIDGAVISDKGLKVEA------GTFVMQVGKRRFARVVLS 423


>gi|53720512|ref|YP_109498.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126453181|ref|YP_001067643.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167817370|ref|ZP_02449050.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167847260|ref|ZP_02472768.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167912498|ref|ZP_02499589.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|242315664|ref|ZP_04814680.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254194849|ref|ZP_04901279.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254299232|ref|ZP_04966682.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|81379101|sp|Q63QX0|SYY_BURPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52210926|emb|CAH36914.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126226823|gb|ABN90363.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157809052|gb|EDO86222.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|169651598|gb|EDS84291.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|242138903|gb|EES25305.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 413

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 181/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLAKSAATDKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|260771826|ref|ZP_05880744.1| tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase 2) (TyrRS 2)
           [Vibrio metschnikovii CIP 69.14]
 gi|260613118|gb|EEX38319.1| tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase 2) (TyrRS 2)
           [Vibrio metschnikovii CIP 69.14]
          Length = 396

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 92/419 (21%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSELGA-EGMIRLAANQTVARMLERDDFKKRYTGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P++E+++            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLAEVEQFKADVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F        MP  +      ++G+ +  L+ 
Sbjct: 287 VKILLAKEIIARFHSQADADAAEQEFINRFQKGALPDEMPEFT-----FAQGIAIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A K +   + + K    +      G      GK+      +
Sbjct: 342 EAGLVGSTSDAMRMVKQGAAKQDGEKLDDAKCIPAV------GTYVYQVGKRKFARVTI 394


>gi|73540182|ref|YP_294702.1| tyrosyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|115305821|sp|Q475S5|SYY_RALEJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72117595|gb|AAZ59858.1| tyrosyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 413

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 178/414 (42%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S+RG    +     L  L         +   +G D TA  +H GH   L  L  LQ  
Sbjct: 23  EVSKRGCDELLIEAEWLQKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDL 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          + 
Sbjct: 83  GHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPA----RTEIR 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R +    +S  EF Y ++Q YD V 
Sbjct: 139 YNSEW-CDPLGARGMIQLAAKYTVARMMERDDFTKRFRSGIPISVHEFLYPLMQGYDSVA 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 198 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 253

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  +   L+  P++EID  +     G+   + K ++A
Sbjct: 254 GVTEA---PNEMFGKLMSISDDLMWQYFTLLSFRPLAEIDLMKQEIAAGRNPRDCKVLLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AEKA           +    +P +S+S       +G+  L+ +A    
Sbjct: 311 QEIVARFHSQADAEKALEDFNHRARGGVP-DDIPAVSLS----GAPLGIAQLLKQANLVP 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ + +S++ +++        G   +  GK+      L 
Sbjct: 366 STSEANRNIEQGGVKIDGATVSDKAVKVAA------GTYVVQVGKRRFARVTLA 413


>gi|78065245|ref|YP_368014.1| tyrosyl-tRNA synthetase [Burkholderia sp. 383]
 gi|115305798|sp|Q39JJ6|SYY_BURS3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77965990|gb|ABB07370.1| tyrosyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 413

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 184/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLVEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRD----KTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+  PM EI   +     G+   + K ++A EI
Sbjct: 256 EQ---PTDMFGKLMSISDTLMWRYFELLSFRPMDEIGGFKREIEGGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTL 411


>gi|33593889|ref|NP_881533.1| tyrosyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81424580|sp|Q7VUW5|SYY_BORPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33563963|emb|CAE43226.1| tyrosyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332383308|gb|AEE68155.1| tyrosyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 409

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 177/414 (42%), Gaps = 29/414 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           ++ RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 18  IARRGCDELLVESEFARKLARSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLG 77

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 78  HNVIFLIGDFTSTIGDPSGRNSTRPPLTREQIETNAKTYYAQASLVLDPA----RTEIRY 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  E    R K    ++  EF Y +LQ YD V L
Sbjct: 134 NSEW-CDPLGARGMIQLASRYTVARMMEREDFTRRFKGGVPIAVHEFLYPLLQGYDSVAL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +     +   LT PLL  T    KM K+    I 
Sbjct: 193 K----ADLELGGTDQKFNLLVGRELQKEYGQEQQCILTMPLLVGTDGVEKMSKSKGNYIG 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +++    P + +    +I D  +  + + L+   +++I   +     G+   +AK  +A 
Sbjct: 249 ISEA---PESMFGKLMSISDTLMWRYYELLSFRSLADIAALKAEIDGGRNPRDAKVALAQ 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H  + AE A  A    F      + MP +++         G+L ++ +AG   S
Sbjct: 306 EIVARFHSPQAAEAALAAFEARFRDGAIPEDMPEVTVG----GAPQGILRILREAGLVAS 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +EA+R+++   +++N   + ++ LQ+        G   +  GK+      L G
Sbjct: 362 GSEAQRNVEQGGVRVNGDRVEDKSLQLSA------GTYVVQVGKRKFARVKLVG 409


>gi|187925323|ref|YP_001896965.1| tyrosyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187716517|gb|ACD17741.1| tyrosyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 416

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 184/412 (44%), Gaps = 30/412 (7%)

Query: 12  LSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 26  ITKRGVDELLIEDEFAQKLAKSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 85

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  
Sbjct: 86  HTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFDQAALVLD----REKTEIRY 141

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L
Sbjct: 142 NSEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL 200

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+ +  I 
Sbjct: 201 ----NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIG 256

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           ++++   P + +    +I D  +  + + L+  PM EI   R     G+   + K ++  
Sbjct: 257 ISEK---PTDMFGKLMSISDVLMWRYFELLSFRPMDEIAGFRKEIEAGRNPRDFKVLLGQ 313

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H + +AE+A                +P ++++       + +  L+ +A    S
Sbjct: 314 EIVARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLVPS 368

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 369 TSEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTL 414


>gi|297170760|gb|ADI21782.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_22O14]
          Length = 404

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 105/423 (24%), Positives = 189/423 (44%), Gaps = 25/423 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K   L I  +RG    +     L+ L     +   +G+D TA  LH GH   +  +
Sbjct: 1   MTSNKEQILEI--KRGVDEILVEKDFLEKLKKNKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++++EN    K      +      
Sbjct: 59  RQFQEFGHEVIFLIGDYTGMIGDPSGVNETRPVLTVEQVKENARTYKNQIFKILDKD--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +     L +I S ++V RML  +  + R K E  +S  EF Y ++Q
Sbjct: 116 -KTRIELNSSWMNKVT-SSELIDIASKYTVARMLERDDFKKRFKSENPISIHEFIYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +C ++MGG+DQ  N++ G  L +         +T PLL       KM K
Sbjct: 174 GYDSVAL----ECDVEMGGTDQKFNLLVGRHLQQLYGQEPQTIITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +    + LN    S  + +    ++ D  +  + + +++  ++EI   + +   G    +
Sbjct: 230 SADNYVALN---DSGDDMFGKIMSVSDDLMWRYFELVSSKNLTEIKNLKNSVNDGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR---GMGLLT 354
            K ++A EI    H +  A+KA  + M+ F      + +  I +S  ++        L  
Sbjct: 287 IKFLLAEEIVERFHNQSVAKKAKESFMQRFQKGGIPEDIDLIEVSIKDIQNDDGETNLPR 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+       S +E  R +K+ +++I+   IS   L+I+ +       + LS GK+  I  
Sbjct: 347 LLAHTNLVNSISEGHRAIKAGSVRIDGEKISQISLEIQTK-----SELILSQGKRRFIKV 401

Query: 415 HLC 417
            + 
Sbjct: 402 KII 404


>gi|270159220|ref|ZP_06187876.1| tyrosyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165954|ref|YP_003456092.1| tyrosyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269987559|gb|EEZ93814.1| tyrosyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288859127|emb|CBJ13056.1| tyrosyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 398

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 101/405 (24%), Positives = 175/405 (43%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +        L   G +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 13  RGCEEVLPEHDLEKKLQKGGSLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL  
Sbjct: 73  GDFTAMIGDPTGKNVTRLPLSQETVLENAKTYQEQVFKILDPL----KTRVAFNSQWLAQ 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L       
Sbjct: 129 FSAVDLIRLAATH-TVARMLERDDFNKRYISNQPIAIHEFLYPLLQGYDSVALK----AD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GGSDQ  N++ G +L +         + +PL+       KM K+L   I +N+    
Sbjct: 184 VELGGSDQKFNLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINEPAAE 243

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
            +       +I D  +  +   L+    +EI   + + LQG    + K   A EI T  H
Sbjct: 244 MF---GKIMSISDELMWRYINLLSFKTGNEIAALKNSVLQGANPRDIKIEFAKEIVTRFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            +++AEKA    +E F   +  + +    ++   +   + L  L+ +A    ST+E+ R 
Sbjct: 301 DQQQAEKAHIDFIERFQKGVIPEDLEEQIVT---LQNSLSLAQLLKQANLTQSTSESMRL 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+KI+ + + +  L++ L          +  GK+      L
Sbjct: 358 IKQGAVKIDGNKVEDPGLELAL-----GQTYIIQVGKRRIAKLRL 397


>gi|256831133|ref|YP_003159861.1| tyrosyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580309|gb|ACU91445.1| tyrosyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 398

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 105/420 (25%), Positives = 168/420 (40%), Gaps = 31/420 (7%)

Query: 1   MPAFKSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M     +    L +  RG +  I+    +  L     +    G+D TA  LH GH   + 
Sbjct: 1   MTDM--ELARQLEQIRRGSVEIINEEELVAKLRRGVPLRIKAGFDPTAPDLHLGHTVLIQ 58

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GH+ I L+G  T +IGDPS + E+R+ +  +E+  N E  K      +    
Sbjct: 59  KLKHFQELGHQVIFLIGDFTGMIGDPSGKSETRKKLTREEVLRNAETYKKQIFKILDQD- 117

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +  N TW+          E+ S ++V RML  +    R K  Q +S  EF Y +
Sbjct: 118 ---RTEIAFNSTWM-DTFSAAEFIELCSRYTVARMLERDDFEKRFKGNQPISIHEFLYPL 173

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKM 237
           +Q YD V L       +++GG+DQ  N++ G  L           LT P+L       KM
Sbjct: 174 VQGYDSVALK----ADVELGGTDQKFNLLMGRHLQREHGQASQIVLTMPILEGLDGVQKM 229

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKE 294
            K+L   I +++    P + +    +I D  +  + + L+   +  I       +     
Sbjct: 230 SKSLGNYIGIDEA---PGDMFGKLMSISDELMWRYYELLSDSSLERIGTLREQVQSGALH 286

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
              AK+ +A EITT  HG E    A  A    F      + +   S+       G  L+ 
Sbjct: 287 PKVAKEDLAQEITTRFHGAEAGVAAREAFNSVFAKQGIPEDIEVFSV-----QAGALLVD 341

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  +G  +S  +ARR  K NA+ I+     +             G   L  GKK  +  
Sbjct: 342 VLSDSGVCSSKGDARRMCKQNAVTIDGRKEEDAAFAFAP------GEYVLKIGKKRFLKL 395


>gi|329942783|ref|ZP_08291562.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287375|ref|YP_004422276.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847956|emb|CBY16952.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506984|gb|ADZ18622.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815043|gb|EGF85032.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 412

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 134/423 (31%), Positives = 211/423 (49%), Gaps = 21/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  + 
Sbjct: 1   MRDFIQHLQDRGILENFSS--GLDSVST--PVSAYLGFDPTAPSLHIGHWIGICFLRRMA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++          
Sbjct: 57  SFGITPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLSRYLP------GLQ 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF
Sbjct: 111 IVNNMDWLKETTVIDFLRDVGKHFRLGAMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ GGSDQWGNI  GID   RL   + + LT PLLT + G K+GKT SG 
Sbjct: 171 AYLFEKHGVCLQCGGSDQWGNITSGIDYIRRLGLGQAYGLTYPLLTNSQGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+ ++TS Y  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A 
Sbjct: 231 IWLDPKLTSAYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LT 354
            I T +HG +   +A           + S            + +G+ L          + 
Sbjct: 291 TIVTSIHGEDGLREAQIVTQSMHPGKVSSVSEKDFQ-DLIAMGQGVSLERAQALGKRWID 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  ++ 
Sbjct: 350 LFVTLGVCSSKGEARRLIEQKGLYVNSEPIENEHSVCEETQVCFDQYVLLAQGKKKKLVL 409

Query: 415 HLC 417
            L 
Sbjct: 410 RLI 412


>gi|238026240|ref|YP_002910471.1| tyrosyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875434|gb|ACR27767.1| Tyrosyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 413

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 183/412 (44%), Gaps = 30/412 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 23  ITKRGVDELLIEDEFAQKLARSEATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  
Sbjct: 83  HTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRD----KTEIRY 138

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L
Sbjct: 139 NSEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL 197

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  L++GG+DQ  N++ G +L ++        LT PLL       KM K+    + 
Sbjct: 198 ----NADLELGGTDQKFNLLVGRELQKQYGQEPQCILTMPLLEGLDGVEKMSKSKGNYVG 253

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           ++++   P   +    +I D  +  + + L+  PM EI++       G+   + K ++A 
Sbjct: 254 ISEK---PAEMFGKLMSISDVLMWRYFELLSFRPMREIEKFKAEIEAGRNPRDFKVLLAQ 310

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H + +AE+A           +    +P++S+        + +  L+ +AG   S
Sbjct: 311 EIVARFHSQADAEQALEDFNHRARGGVP-DDIPSVSLG----GAPLAIGQLLKQAGLVPS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R+++   +KI+ + +S++ L+++       G   +  GK+      +
Sbjct: 366 TSEALRNIEQGGVKIDGTTVSDKGLKVEA------GEYVVQVGKRRFARVTV 411


>gi|148360777|ref|YP_001251984.1| tyrosyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106156|ref|YP_003617856.1| tyrosyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282550|gb|ABQ56638.1| tyrosyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648057|gb|ADG23904.1| tyrosyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 401

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 176/405 (43%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +  P     L     +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 13  RGCEEILPVPELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL  
Sbjct: 73  GDFTAMIGDPTGKNVTRMPLSQETVLENAKTYQHQVFKILDPD----KTTVAFNSQWLNK 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L       
Sbjct: 129 FDAVDLIRLAATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALK----AD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         + +PL+       KM K+L   I +N+   +
Sbjct: 184 VELGGTDQKFNLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---T 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVH 311
           P   +    ++ D  +  +   L+     EI ++ +   +GK   + K   A EI    H
Sbjct: 241 PEQMFGKIMSVSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +AE A    +E F      + +  +S+    ++  + L+ L+ +     ST+E+ R 
Sbjct: 301 DQTQAEFAHNKFIERFQKGNIPEDLEELSLV---IAEPIALVQLLKQIDLTASTSESIRM 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+K++   IS+  L++ +       +  +  GK+      +
Sbjct: 358 VKQGAVKVDGDKISDPSLKLPI-----GKSYIIQVGKRRIAKLSI 397


>gi|254246315|ref|ZP_04939636.1| Tyrosyl-tRNA synthetase, class Ib [Burkholderia cenocepacia PC184]
 gi|124871091|gb|EAY62807.1| Tyrosyl-tRNA synthetase, class Ib [Burkholderia cenocepacia PC184]
          Length = 475

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 183/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 87  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 146

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 147 VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRD----KTEIRYNS 202

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 203 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 259

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 260 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 317

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI   +     G+   + K ++A EI
Sbjct: 318 EK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKREAEGGRNPRDFKVLLAQEI 374

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 375 VARFHSQPDAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 429

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L
Sbjct: 430 EALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTL 473


>gi|206561682|ref|YP_002232447.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|198037724|emb|CAR53667.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 413

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 183/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRD----KTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI   +     G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKREAEGGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQPDAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTL 411


>gi|78222398|ref|YP_384145.1| tyrosyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|115305806|sp|Q39WF4|SYY_GEOMG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78193653|gb|ABB31420.1| tyrosyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 403

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 23/389 (5%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L +   +    G+D TA  LH GH   L  +   Q+ GH+   L+G  T +IGDP+ + E
Sbjct: 31  LSTGVPLRIKAGFDPTAPDLHLGHTVLLHKMRQFQQLGHEVCFLIGDFTGMIGDPTGKSE 90

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +R+ +  +++ +N E  K      +          ++ N  WL  +   D++  + +  +
Sbjct: 91  TRKALTREDVLKNAETYKEQVFKILDPK----KTRVVFNSEWLGKMTASDMI-GLAAQST 145

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V RML  +    R   +  +S  EF Y ++Q YD V L       +++GG+DQ  N++ G
Sbjct: 146 VARMLERDDFGKRFANQLPISIHEFLYPLIQGYDSVALK----ADVELGGTDQKFNLLVG 201

Query: 210 IDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            +L    K      +T PLL       KM K+L   I +N+        +    +I D  
Sbjct: 202 RELQRVWKQSPQSVITMPLLEGLDGVNKMSKSLGNYIGINEPAD---EIFGKIMSISDEL 258

Query: 269 VVSFAKRLTTLPMSEIDR---MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           ++ + + L+ L ++EI++     +        AKK +A EI    HG   A+ A  + + 
Sbjct: 259 MLRYYELLSDLTLAEIEKLKAAMRDGDVHPMAAKKQLAREIVARYHGAVAADNAEESFVR 318

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F  +   + MP   +S +E    + L  L+ +AG   S +E RR +    +K+N   ++
Sbjct: 319 RFRDNQTPEEMPECILSAEEGK--VLLGRLLAEAGLVKSNSEGRRAINQGGVKVNGEKVT 376

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           N+ L++        G   L FGK+     
Sbjct: 377 NDMLELP-----GVGEYVLQFGKRRFARI 400


>gi|29840193|ref|NP_829299.1| tyrosyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|75539675|sp|Q823H9|SYY_CHLCV RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29834541|gb|AAP05177.1| tyrosyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 412

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 135/423 (31%), Positives = 215/423 (50%), Gaps = 21/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             DF+  L +RG +   S+   LD +  +  ++AY+G+D TA+SLH GH   +  L  + 
Sbjct: 1   MRDFIKHLKDRGILEDFSH--GLDSV--ESPISAYLGFDPTAASLHIGHWIGICFLRRMA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+G  T +IGDPS +   R ++ S E+  N +K+    S ++          
Sbjct: 57  SFGITPVALVGSATGMIGDPSGKSIERTLLESNEVAHNSKKLSECLSHYLP------GVQ 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W      ID LR++G  F +  ML  ++++ R++ E+ +S+ EF+Y++LQ+YDF
Sbjct: 111 IVNNMEWFQGTTVIDFLRDVGKHFRLGTMLGKDTIKQRIQSEEGISYTEFSYILLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG 
Sbjct: 171 AHLFEKHGIALQCGGSDQWGNITSGIDYIRRKGLGQAYGLTYPLLTNSQGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+  +TSPY  +QY+  + DA+V   A+ LT L   EI  + K    +    KK +  
Sbjct: 231 IWLDPTLTSPYELYQYFLRLPDAEVPKIARTLTLLSNEEIFDLDKKFLSDPIAVKKFVTE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LT 354
            I T +HG +  +KA           + S            + +G+ L          + 
Sbjct: 291 TIVTSIHGEDGLKKAQMVTQSMHPGKVSSISEKDFQ-DLISMGQGISLDRVQTLGKRWID 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L V  GF  S  EARR ++   + +N+  I++E    + +       + L+ GKK  ++ 
Sbjct: 350 LFVGVGFCNSKGEARRLIEQKGLYVNSEPIADEHSVFEERQVCYDQYVLLAQGKKKKLVL 409

Query: 415 HLC 417
           HL 
Sbjct: 410 HLI 412


>gi|195429808|ref|XP_002062949.1| GK21649 [Drosophila willistoni]
 gi|194159034|gb|EDW73935.1| GK21649 [Drosophila willistoni]
          Length = 466

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 128/438 (29%), Positives = 213/438 (48%), Gaps = 29/438 (6%)

Query: 6   SDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            + L  L++RGF   I   +    +  L + G  + Y G+D TA SLH G+L  +M L  
Sbjct: 28  KNLL-ELTDRGFFQSIFPDTAAPRMKHLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLLH 86

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI----FSSFIKYGT 118
            Q+ GHKPI+L+GG T +IGDPS R   R  +    I+ N++ I+      F +      
Sbjct: 87  CQRAGHKPIALVGGATGLIGDPSGRKTERNQLGESVIETNLKAIEQQLLRVFKNHEDCLW 146

Query: 119 GKTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                        ++NN  W  ++  ++ +  +G  F +  MLS  SV+SRL+ E  +SF
Sbjct: 147 DTKKNKSPLAPLTIVNNAEWYANLHLVEFIANMGRHFRMGSMLSRSSVQSRLESEDGMSF 206

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLT 230
            EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT P++T
Sbjct: 207 TEFTYQIFQAYDWLHLLQKHNCCFQMGGSDQMGNLMTGHELISRVERKREVFGLTLPIVT 266

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
              G K GK+   A+WL+ E TSP+  +Q++  + D++V    K  T +P+ E++++ + 
Sbjct: 267 NEEGDKFGKSAGNAVWLDPEKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPEVEQLIRE 326

Query: 291 QG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPT 338
                E  +A+ ++A ++T +VHG    ++A       +  +             Q +  
Sbjct: 327 HQKEPEKRKAQTLLAEDVTLLVHGENGLKQAERVTNALYKGNVEALAELNYAEIKQTLQG 386

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFD 397
             +       GM +L L +KA    + N+A R + +    +N   + N    I       
Sbjct: 387 AILVDMLKESGMSILQLALKAKCFPTENDAVRIINAGGFYVNQKRVQNIAEVITTGVHIL 446

Query: 398 STGNIKLSFGKKNHIICH 415
                 L  GK+N  I  
Sbjct: 447 RNDISLLRVGKRNFYIIR 464


>gi|94265281|ref|ZP_01289039.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
 gi|93454215|gb|EAT04533.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
          Length = 411

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 168/408 (41%), Gaps = 27/408 (6%)

Query: 15  RGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    IS       L         +    G+D TA  LH GH   +  +   Q+ GH+ 
Sbjct: 20  RGVEQVISAADLERKLHQAAKENRPLRVKAGFDPTAPDLHLGHTVLVQKMKHFQELGHEI 79

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T +IGDP+ + E+R+ +  +E+  N E  K      +          ++ N  
Sbjct: 80  YFLIGDFTGMIGDPTGKSETRKPLTPEEVTANAETYKEQVFKILDPA----RTRVVFNSV 135

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   D++  + S  +V RML  E  + R   E+++   EF Y ++Q YD V LA  
Sbjct: 136 WLDKLSPRDMI-RLASQLTVARMLEREDFKQRFVNEKAIGIHEFMYPLIQGYDSVALA-- 192

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G DL           LT PLL       KM K+L   I + +
Sbjct: 193 --ADVELGGTDQLFNLLTGRDLQRVWGQEPQVVLTMPLLEGLDGVNKMSKSLDNYIGITE 250

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
              S  + +    ++ D  +  + + L+ L   EI  + +  G         K+ +A E+
Sbjct: 251 ---SADDIYGKTLSMPDDLMFRYYELLSDLSQLEIADLQQGVGSGKLHPKAVKQRLAREL 307

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               +    A +A       F      + +P +++          L  L+V AG    T 
Sbjct: 308 VARFYDEPAARRAEDNFERVFKQHQAPEDVPELTLVAG--GEPCWLPRLLVDAGLVKGTG 365

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR +K  A+ I+   ++++   +        G + L  GK+     
Sbjct: 366 EARRLIKQRAVSIDGEKVADDSATVATS-----GEVLLKVGKRRFCRV 408


>gi|33603324|ref|NP_890884.1| tyrosyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81430199|sp|Q7WFD0|SYY_BORBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33577448|emb|CAE34713.1| tyrosyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 409

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 177/414 (42%), Gaps = 29/414 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           ++ RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 18  IARRGCDELLVESEFARKLACSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLG 77

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 78  HNVIFLIGDFTSTIGDPSGRNSTRPPLTREQIETNAKTYYAQASLVLDPA----RTEIRY 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  E    R K    ++  EF Y +LQ YD V L
Sbjct: 134 NSEW-CDPLGARGMIQLASRYTVARMMEREDFTRRFKGGVPIAVHEFLYPLLQGYDSVAL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +     +   LT PLL  T    KM K+    I 
Sbjct: 193 K----ADLELGGTDQKFNLLVGRELQKEYGQEQQCILTMPLLVGTDGVEKMSKSKGNYIG 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +++    P + +    +I D  +  + + L+   +++I   +     G+   +AK  +A 
Sbjct: 249 ISEA---PESMFGKLMSISDTLMWRYYELLSFRSLADIAALKAEIDGGRNPRDAKVALAQ 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H  + AE A  A    F      + MP +++         G+L ++ +AG   S
Sbjct: 306 EIVARFHSPQAAEAALAAFEARFRDGAIPEDMPEVTVG----GAPQGILRILREAGLVAS 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +EA+R+++   +++N   + ++ LQ+        G   +  GK+      L G
Sbjct: 362 GSEAQRNVEQGGVRVNGDRVEDKSLQLSA------GTYVVQVGKRKFARVKLVG 409


>gi|312143797|ref|YP_003995243.1| tyrosyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904448|gb|ADQ14889.1| tyrosyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 426

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 99/421 (23%), Positives = 182/421 (43%), Gaps = 27/421 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELD----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ L IL  RG    IS     +           +   +G D TA  +H GH   L  L 
Sbjct: 24  NEQLKILK-RGVSDLISEEELKEKLIEAEKEGRPLKVKLGLDPTAPDIHLGHTVVLRKLK 82

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GH+   ++G  T +IGDP+ + E+R+ +  +E++EN    +  FS  +       
Sbjct: 83  QFQDLGHQVYLIIGDFTGMIGDPTGKSETRKQLTKEEVRENALTYQEQFSKVLDRD---- 138

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N  WL  +K+   + E+ + ++V RML  +    R K  + +   EF Y ++Q 
Sbjct: 139 KTKLVYNSDWLSEMKF-SDVLELSAQYTVARMLERDDFSKRYKAGKPIGIHEFFYPLMQG 197

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKT 240
           YD V +    +  +++GG+DQ  N++ G +L +         +T PLL       KM K+
Sbjct: 198 YDSVAI----EADVELGGTDQRFNLLVGRNLQKEYGQDSQVIITMPLLEGLDGVNKMSKS 253

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINE 297
           L   I +      P + +    ++ D  +  + + LT + + +++ +            +
Sbjct: 254 LDNYIGVY---DKPADMYGKVMSMPDELIARYYELLTDISIEQLNEIKAKLNRDDFNPMQ 310

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLI 356
            KK +A E+    H  E A+ AA      F        +P + I K E+  G + ++ ++
Sbjct: 311 LKKELAAELVREYHDEEAAQYAAQEFENVFSQGNLPDDIPEVKIEKSELDEGELWIVKIV 370

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S +EARR +K  A+ I+        L ++++D      + +  GK+      L
Sbjct: 371 AATGLVDSNSEARRMIKQGAVTIDGEKYDKINLDLEVKD-----GMIVQIGKRRFAQIKL 425

Query: 417 C 417
            
Sbjct: 426 S 426


>gi|295677652|ref|YP_003606176.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437495|gb|ADG16665.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 416

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 95/411 (23%), Positives = 180/411 (43%), Gaps = 30/411 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLARSAATAKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRD----KTEIRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL- 200

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+ +  I +
Sbjct: 201 ---NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P + +    +I D  +  + + L+  PM EI   +     G+   + K ++  E
Sbjct: 258 SEK---PTDMFGKLMSISDTLMWRYFELLSFRPMDEIAGFKREAEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 370 SEALRNIEQGGVKIDGTAVSDKGLKVEA------GEYVVQVGKRRFARVTL 414


>gi|226198405|ref|ZP_03793974.1| tyrosine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225929588|gb|EEH25606.1| tyrosine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 460

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 72  KRGVDELLIEEEFAQKLAKSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 131

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 132 VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRA----KTEIRYNS 187

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 188 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 244

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 245 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 302

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 303 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 359

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 360 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 414

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 415 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 458


>gi|134280550|ref|ZP_01767261.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237813770|ref|YP_002898221.1| tyrosine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|134248557|gb|EBA48640.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237503099|gb|ACQ95417.1| tyrosine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 435

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 47  KRGVDELLIEEEFAQKLAKSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 106

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 107 VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRA----KTEIRYNS 162

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 163 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 219

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 220 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 277

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 278 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 334

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 335 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 389

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 390 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 433


>gi|167825777|ref|ZP_02457248.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|254180683|ref|ZP_04887281.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184211222|gb|EDU08265.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 413

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLAKSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRA----KTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|312797270|ref|YP_004030192.1| Tyrosyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312169045|emb|CBW76048.1| Tyrosyl-tRNA synthetase (EC 6.1.1.1) [Burkholderia rhizoxinica HKI
           454]
          Length = 420

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 183/412 (44%), Gaps = 30/412 (7%)

Query: 12  LSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           ++ RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 30  IARRGCDELLIEDEFAQKLARSAQTGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+++R  +  ++I+ N +      +  +     +    +  
Sbjct: 90  HTVIFLIGDFTSLIGDPSGRNQTRPPLTREQIEANAKTYFEQAALVLD----REKTEIRY 145

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +   D + ++ S ++V RML  +    R +    +S  EF Y ++Q YD V L
Sbjct: 146 NSEWSMPLGA-DGMIKLASRYTVARMLERDDFTKRFQGGVPISIHEFLYPLMQGYDSVAL 204

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L ++        LT PLL       KM K+ +  + 
Sbjct: 205 Q----SDLELGGTDQKFNLLVGRELQKQYGQEPQCILTMPLLEGLDGVDKMSKSKNNYVG 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           ++++   P + +    +I D  +  + + L+   + EI    +     +   E K ++A 
Sbjct: 261 ISEK---PSDMFGKLMSISDTLMWRYFELLSFRSLEEIADFKRQVQAGRNPRELKVLLAQ 317

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H + +A++A           +    +P I++S       + +  L+ +AG   S
Sbjct: 318 EIVARFHSQADAQRALEDFNHRARGGVP-DDIPEIALS----GAPLPIGQLLKQAGLVPS 372

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R+++ + +KI+ + I+++ L++        G   +  GK+      L
Sbjct: 373 TSEAWRNIEQSGVKIDGTTITDKGLKL------DAGVYVVQVGKRRFARVTL 418


>gi|171464163|ref|YP_001798276.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193701|gb|ACB44662.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 410

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 183/414 (44%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +     +  L     ++  +   +G D TA  +H GH   L  L  LQ  
Sbjct: 20  EVTKRGCDELLVEADWVQKLARSQATKTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I L+G  TS+IGDPS R+ +R  + ++EI  N E      S  +      +   + 
Sbjct: 80  GHTVIFLIGDFTSMIGDPSGRNATRPPLTAEEIAINAETYYRQASMVLDP----SKTEVR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V +ML  +    R +    +S  EF Y ++Q YD V 
Sbjct: 136 YNSEW-CDPLGARGMIQLAARYTVAQMLERDDFTKRYRSGVPISVHEFLYPLMQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG DQ  N + G +L           LT PLL       KM K+    I
Sbjct: 195 LK----SDLELGGIDQKFNFLVGRELQREYGQEPQCILTMPLLVGLDGVDKMSKSKGNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
            +++     +       +I D  +  +   L+  PM+EID M +      N  + K ++A
Sbjct: 251 GISEPAGEMF---GKLLSISDDLMWDYFTLLSFRPMAEIDLMKQEVAAGRNPKDCKVLLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H +  AEKA           I    +P +++S       MG+  L+  AG A 
Sbjct: 308 QEIVARFHSQAAAEKALEDFNHRAKGGIP-DDIPEVNLS----GAPMGIANLLKAAGLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++ N +KI+ + I++++L+++       GN  +  GK+  +   L 
Sbjct: 363 STSEANRNIEQNGVKIDGTTIADKQLKVEA------GNYVVQVGKRKFVKVTLA 410


>gi|89898384|ref|YP_515494.1| tyrosyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89331756|dbj|BAE81349.1| tyrosyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 427

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 128/423 (30%), Positives = 209/423 (49%), Gaps = 21/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             DF+  L +RG +   S+   LD + S   V+AYIG+D TA SLH GH   +  L  + 
Sbjct: 16  MRDFIKYLKDRGILEDFSS--GLDNVIS--PVSAYIGFDPTAPSLHIGHWLGICFLRRMA 71

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++       +  
Sbjct: 72  TFGVTPMALVGSATGMIGDPSGKSVERSLLERNQVAYNSQKLSECLSHYLP------EVQ 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W      ID LR++G  F +  MLS ++++ R++ E+ +S+ EF+Y++LQ+YDF
Sbjct: 126 IVNNLDWFKDTTVIDFLRDVGKHFRLGTMLSKDTIKQRIQSEEGISYTEFSYILLQSYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT +G 
Sbjct: 186 AHLFEKHGVSLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTNSQGKKIGKTETGT 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+  +TSPY  +QY+  + D +    A+ LT L   EI  + +    +    K+ +A 
Sbjct: 246 IWLDPNLTSPYELYQYFLRLPDQETPKIARMLTLLSNEEIFDLDQKFLLDPIAVKRFVAE 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LT 354
            I   +HG    ++A           +              + +G+ L          + 
Sbjct: 306 TIVASIHGEGGLQEALAVTQSMHPGRVSFISEKDFQ-DLISMGQGVSLERSQTIGKRWVD 364

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L V  G   S  EARR +K   + +N+  +++E+   +         + L+ GKK  ++ 
Sbjct: 365 LFVDVGVCGSKGEARRLVKQKGLYVNSDPVADEQSVFEEAQICFDQYVLLAQGKKKKLVL 424

Query: 415 HLC 417
            L 
Sbjct: 425 RLI 427


>gi|94986467|ref|YP_594400.1| tyrosyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94730716|emb|CAJ54078.1| Tyrosyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 398

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 179/410 (43%), Gaps = 25/410 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +RG++  I+       L ++  +    G+D TA  LH GH   +  L   Q+ GH  
Sbjct: 9   QLIKRGYVELINEESLRKKLSNEKPLVVKAGFDPTAPDLHLGHTVLIHKLRHFQQLGHNV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T +IGDPS R  +R  +  +++Q N E  K      +          ++ N  
Sbjct: 69  TFLIGDFTGLIGDPSGRSTTRPALTVEQVQANAETYKKQIFKILDPL----KTNVVFNSK 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL S+  +D +  + S +++ RML  +   +R K    ++  E  Y ++Q YD V L   
Sbjct: 125 WLMSMSSVDFI-RLASHYTLARMLERDDFSNRYKENTPIALHELLYPLMQGYDSVALK-- 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L           LT PLL       KM K+    + +++
Sbjct: 182 --SDIELGGTDQKFNLLVGRTLMSHYNIEPQCILTMPLLEGLDGVRKMSKSYGNYVGIDE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATEI 306
           +   PY  +    +I D  +  + + ++T  +SE++++ +          + K+ +A +I
Sbjct: 240 Q---PYVQFSKVMSISDELMWRYYELISTSSLSEVEKLKQNVKEGHLHPKKVKEQLAVDI 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  HG+E+A +A       F         P    +  E S+       +  +   TS +
Sbjct: 297 VTQYHGKEKAYEALQEFTAVFVNGALPDDTPEFICNYGETSKP---PAFLTDSKLCTSRS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA+R +K  ++ +N+    + +L ++  D        +  GKK  +   +
Sbjct: 354 EAKRLIKQGSLTVNDKRYHDVELPLEPGD------YIIKLGKKRFLRLQV 397


>gi|115350631|ref|YP_772470.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170699601|ref|ZP_02890640.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|115280619|gb|ABI86136.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170135483|gb|EDT03772.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 413

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 183/411 (44%), Gaps = 30/411 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI    +     +   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKRDAEGGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALDDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 368 EALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLS 412


>gi|171319634|ref|ZP_02908728.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095125|gb|EDT40131.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 413

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 183/411 (44%), Gaps = 30/411 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI    +     +   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKRDAEGGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 368 EALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLS 412


>gi|76810785|ref|YP_334783.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|76580238|gb|ABA49713.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 435

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 47  KRGVDELLIEEEFAQKLAKSAATDKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 106

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 107 VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRA----KTEIRYNS 162

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 163 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 219

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 220 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 277

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 278 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 334

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 335 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 389

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 390 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 433


>gi|254191511|ref|ZP_04898014.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254260989|ref|ZP_04952043.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|115305797|sp|Q3JNS0|SYY_BURP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157939182|gb|EDO94852.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254219678|gb|EET09062.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 413

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLAKSAATDKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRA----KTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|299067944|emb|CBJ39158.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 423

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 181/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 33  EVTQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 92

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 93  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 148

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 149 YNSEW-CDPLGARGIIQLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 207

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 208 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            +++    P   +    +I D  + ++   L+  P++EID  +     G+   + K ++A
Sbjct: 264 GISEA---PNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDLMKEEIALGRNPRDCKVLLA 320

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H   +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 321 QEIIARFHSPADAERALEDFNHRARGGVP-DDIPQIELS----GAPLGIAQLLKQAGLCP 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 376 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 423


>gi|126440034|ref|YP_001060382.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126219527|gb|ABN83033.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 413

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLAKSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N        +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNARTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|220931414|ref|YP_002508322.1| Tyrosyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992724|gb|ACL69327.1| Tyrosyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 407

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 104/420 (24%), Positives = 182/420 (43%), Gaps = 27/420 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELD----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ L+IL  RG    I+                 +   +G D TA  +H GH   L  L 
Sbjct: 4   NEQLNILK-RGVSELITEKELKKKLELAREEGRPLRVKLGLDPTAPDIHLGHSVVLRKLK 62

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GH+   ++G  T +IGDP+ +  +R+ +  +E++EN +  +  FS  +       
Sbjct: 63  QFQDLGHEVYLIIGDFTGMIGDPTGKSVTRKQLTEEEVRENAKTYREQFSKILNPD---- 118

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N  WL  +     + E+ S ++V RML  E    R K  + +S  EF Y ++Q 
Sbjct: 119 KTKLVFNSNWLSDLNL-SDVIELSSKYTVARMLEREDFSQRYKSGKPISIHEFIYPLMQG 177

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKT 240
           YD V +       +++GG+DQ  N++ G  L +         +  P+L       KM K+
Sbjct: 178 YDSVAIK----ADIELGGTDQKFNLLVGRHLQKEFGQKPQVIMMMPILEGLDGVNKMSKS 233

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINE 297
           L   I +N     P + +    +I D+ +  + + LT +P     E+ +  +        
Sbjct: 234 LDNYIGIN---DEPKDMYGKVMSIPDSLITRYFELLTDVPEDKINEMKKSMEEDRVNPMN 290

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLI 356
            KK +A  I T  HG++ A +A       F      + +P + I + ++  G M ++ LI
Sbjct: 291 FKKELARIIVTEYHGQDAAREAEKEFKRVFSQGKLPEDIPEVIIEQKDLEDGKMWIVHLI 350

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S +EARR +K  A+ IN+    +    IK++D      + +  GK+      L
Sbjct: 351 AATGLVKSNSEARRMIKQGAVSINDEKHKSINEDIKVED-----GMIIRIGKRRFAKIKL 405


>gi|167904237|ref|ZP_02491442.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 413

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLAKSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRA----KTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|269468935|gb|EEZ80519.1| Tyrosyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 394

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 170/406 (41%), Gaps = 26/406 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ERG    +        L     +    G+D TA  LH GH   +  L  LQ  GH+ + L
Sbjct: 11  ERGAHEILPVDELKKKLAKNKPLRIKAGFDPTAPDLHLGHTVLINKLKQLQDLGHEILFL 70

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ + ++R  +  +++ +N E  +      +          ++ N  W+ 
Sbjct: 71  IGDFTAMIGDPTGKSKTRPPLSKEQVLKNAESYQDQVFKILDKD----KTKVVFNSDWIG 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  ++++ ++ S  ++ RML       R K  Q ++  EF Y ++Q  D VEL      
Sbjct: 127 KMSALEMI-QLASQKTMARMLERNDFSDRYKAGQDIAIHEFLYPLIQGRDSVELK----A 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G DL ++        LT P+L       KM K+L   I ++    
Sbjct: 182 DVELGGTDQKFNLLMGRDLQKQAGMESQVILTMPILEGLDGVQKMSKSLDNYIGID---D 238

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMV 310
            P + +    +I D  +  + + L+   +  I                K  +A EI T  
Sbjct: 239 KPDDMFGKIMSISDDLMWRYLELLSFETLETIASWKTEVENGENPRNIKFRLADEIITRF 298

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  ++A++A    +  F  +     MP  S        G+ +  L+  +G  +ST++A R
Sbjct: 299 HSSDDAKQAQQNFINRFAKNKVPDEMPEFS-----FESGIKIANLLKDSGLVSSTSDAFR 353

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +K  A KI    IS+  L  +       G      GK+      +
Sbjct: 354 MIKEGAAKIEGEKISDRNLVPES------GTAVYQVGKRKFAKVTI 393


>gi|27262156|gb|AAN87359.1| Tyrosyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 420

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 103/412 (25%), Positives = 181/412 (43%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG    +     +  L      +  +   +G D TA  +H GH   L  L   Q  G
Sbjct: 21  LLRRGTAEIVPEEELVKKLERSIVEKRPLRVKLGLDPTAPDIHLGHTVVLQKLRHFQDLG 80

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T  +GDPS + E+R+ +  +E+  N E  K      +          +  
Sbjct: 81  HQVVIVIGDFTGRVGDPSGKSETRKQLTEEEVNRNAETYKTQIFKVLDP----EKTEVTF 136

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +WL  + +   + ++ + ++V RML  E    R++  + +   E  Y ++Q YD V L
Sbjct: 137 NASWLQPLNF-ADILQLAAKYTVARMLEREDFTKRMQENRPIGMHELFYPLMQGYDSVAL 195

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G  L +        AL  P+L       KM K+L   I 
Sbjct: 196 K----ADVELGGTDQKFNLLVGRVLQKEYGQEPQVALMMPILEGLDGVHKMSKSLGNYIG 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIA 303
           +N+   SP   +    +I D  +V + + +T +P  EI  +A   K       + K  + 
Sbjct: 252 INE---SPREMFGKTMSIADELMVRYFELVTRIPSEEIAAIASGLKEGSLHPRDIKMRLG 308

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFA 362
            EI ++ HG E A +A    +  F        +P   I+ D +  G + L+ ++V AG A
Sbjct: 309 REIVSLYHGEEAARQAEEEFINIFQKKELPDEIPEFVITSDIMENGQVSLIKVLVAAGLA 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EARR +   A+K+NN +I + +  +  ++        +  GK++ I  
Sbjct: 369 KSNGEARRKIVEGAVKVNNQVIKDIQSTVPPEE-----GTLIRLGKRHFIRL 415


>gi|270289145|ref|ZP_06195447.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Weiss]
          Length = 408

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 138/418 (33%), Positives = 220/418 (52%), Gaps = 25/418 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L +RG +   S    L+ L +   V+AY+G+D TA SLH GH   +  L  L 
Sbjct: 1   MQQLIDSLQKRGILDNSS--AGLESLTA--PVSAYLGFDPTAPSLHIGHWIGICFLRRLS 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  PI+L+GG T +IGDPS +   R ++  +++ +N +KI+   ++++       D  
Sbjct: 57  AYGITPIALVGGATGMIGDPSGKSVERSLLDQEQVLDNSKKIEVALANYLP------DIR 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL S+  +D LR+IG +F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF
Sbjct: 111 IVNNADWLGSLSMVDFLRDIGKYFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K++   LQ GGSDQWGNI  GID   R    + F LT PLLT + G K+GKT SG 
Sbjct: 171 AHLFKHHGVVLQCGGSDQWGNITSGIDYIRRKGLGQAFGLTYPLLTDSKGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E+TSPY  +QY+  + D ++   A+ LT L   E+  + K    +    K+ +A 
Sbjct: 231 VWLDPELTSPYELFQYFLRLSDQEIPKIARMLTLLDDDEVLALDKRLENDPQAVKRYVAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL------------ 352
            I   VHG E   +A       F      +++    ++   V  G+G+            
Sbjct: 291 VIVKDVHGAEGLAQALATTESFFANKG--KNITESELA-ALVQSGVGINVARADVIGKRW 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L ++V+ GF +S  EARR ++   + +N   + +E+  +          I LS GKK 
Sbjct: 348 LDVVVQLGFCSSKGEARRLIQQRGLYVNQEPLIDEQSVLDGTYLCFDRYILLSQGKKK 405


>gi|52840810|ref|YP_094609.1| tyrosyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627921|gb|AAU26662.1| tyrosyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 423

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 175/405 (43%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +  P     L     +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 35  RGCEEILPVPELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 94

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL  
Sbjct: 95  GDFTAMIGDPTGKNVTRMPLSQETVLENAKTYQHQVFKILDPD----KTTVAFNSQWLNK 150

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L       
Sbjct: 151 FNAVDLIRLAATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALK----AD 205

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         + +PL+       KM K+L   I +N+   +
Sbjct: 206 VELGGTDQKFNLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---T 262

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVH 311
           P   +    ++ D  +  +   L+     EI ++ +   +GK   + K   A EI    H
Sbjct: 263 PEQMFGKIMSVSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFH 322

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +AE A    +E F      + +  +S+    ++  + L  L+ +     ST+E+ R 
Sbjct: 323 DQTQAEFAHNKFIERFQKGNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRM 379

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+K++   IS+  L++ +       +  +  GK+      +
Sbjct: 380 VKQGAVKVDGDKISDPSLKLPI-----GKSYIIQVGKRRIAKLSI 419


>gi|170693375|ref|ZP_02884534.1| tyrosyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170141530|gb|EDT09699.1| tyrosyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 417

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 182/412 (44%), Gaps = 30/412 (7%)

Query: 12  LSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 27  ITKRGVDELLIEEEFAQKLAKSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 86

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  
Sbjct: 87  HTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRY 142

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L
Sbjct: 143 NSEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL 201

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+ +  I 
Sbjct: 202 ----NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIG 257

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           ++++   P + +    +I D  +  + + L+  PM EI   +     G+   + K ++  
Sbjct: 258 ISEK---PTDMFGKLMSISDTLMWRYFELLSFRPMDEIAAFKREAEAGRNPRDFKVMLGQ 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H   +AE+A                +P ++++       + +  L+ +A    S
Sbjct: 315 EIVARFHSPADAERALEDFN-HRAKGGVPDDIPAVALA----GAPLAIGQLLKQANLVPS 369

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 370 TSEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTL 415


>gi|212704211|ref|ZP_03312339.1| hypothetical protein DESPIG_02266 [Desulfovibrio piger ATCC 29098]
 gi|212672415|gb|EEB32898.1| hypothetical protein DESPIG_02266 [Desulfovibrio piger ATCC 29098]
          Length = 399

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 169/409 (41%), Gaps = 27/409 (6%)

Query: 13  SERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
            +RG + ++ + +EL     +G  +   +G+D TA  LH GH   +  +   Q+ GH+ I
Sbjct: 11  IKRG-VAELIDEKELRKKLERGTPLRVKVGFDPTAPDLHLGHTVVMHKMRHFQELGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T  IGDP+ R E+R  +  +++  N E  K      +         ++  N  W
Sbjct: 70  FLIGDFTGRIGDPTGRSETRPPLTEEQVIANAETYKKQVFKILDP----EKTIVEFNSHW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +   D +R   S+ +V RM+  +    R + ++ +S  EF Y + Q YD V L    
Sbjct: 126 LGKMDASDFIRLASSY-TVARMMERDDFEKRFREQRPISIHEFIYPLCQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              ++MGG+DQ  N++ G +L           LT PLL       KM K+    I +++ 
Sbjct: 182 -ADVEMGGTDQKFNLLVGRNLQAHYGMESQCILTMPLLEGLDGVRKMSKSYGNYIGIDEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEIT 307
              P   +     I D  +  + + L+   + EI                AK+++A E+ 
Sbjct: 241 ---PSEIFGKVMAISDELMWRYYELLSFKSLEEIATLKEDVAQGRVHPKAAKEMLAHEMV 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +  H  ++A++A       F         P  + ++ + S     L     AG   S  E
Sbjct: 298 SRYHSEKDADEARQGFNAVFASGGVPDDAPCHTCAQGDDSTPPAFLEA---AGLVKSRGE 354

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A+R +K  A+ ++     +    +        G   +  GKK  +   +
Sbjct: 355 AKRLIKEGALSVDGQRCDDAMSPLAA------GEYVIKLGKKRFLRLTV 397


>gi|209517518|ref|ZP_03266358.1| tyrosyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502051|gb|EEA02067.1| tyrosyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 416

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 179/411 (43%), Gaps = 30/411 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLARSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRD----KTEIRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL- 200

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+ +  I +
Sbjct: 201 ---NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P   +    +I D  +  + + L+  P+ EI   +     G+   + K ++  E
Sbjct: 258 SEK---PTEMFGKLMSISDTLMWRYFELLSFRPLDEIAGFKREADAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 370 SEALRNIEQGGVKIDGTAVSDKGLKVEA------GEYVVQVGKRRFARVTL 414


>gi|296162970|ref|ZP_06845747.1| tyrosyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295886764|gb|EFG66605.1| tyrosyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 416

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 180/411 (43%), Gaps = 30/411 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLAKSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +          +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRD----KTEIRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL- 200

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+ +  I +
Sbjct: 201 ---NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P + +    +I D  +  + + L+  PM EI   +     G+   + K ++  E
Sbjct: 258 SEK---PTDMFGKLMSISDVLMWRYFELLSFRPMEEIAGFKKETEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R+++   +KI+ + +S++ L+I+       G   +  GK+      L
Sbjct: 370 SEALRNIEQGGVKIDGATVSDKGLKIEA------GEYVVQVGKRRFSRVTL 414


>gi|115305808|sp|Q5ZY07|SYY_LEGPH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 401

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 175/405 (43%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +  P     L     +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 13  RGCEEILPVPELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL  
Sbjct: 73  GDFTAMIGDPTGKNVTRMPLSQETVLENAKTYQHQVFKILDPD----KTTVAFNSQWLNK 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L       
Sbjct: 129 FNAVDLIRLAATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALK----AD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         + +PL+       KM K+L   I +N+   +
Sbjct: 184 VELGGTDQKFNLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---T 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVH 311
           P   +    ++ D  +  +   L+     EI ++ +   +GK   + K   A EI    H
Sbjct: 241 PEQMFGKIMSVSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +AE A    +E F      + +  +S+    ++  + L  L+ +     ST+E+ R 
Sbjct: 301 DQTQAEFAHNKFIERFQKGNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRM 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+K++   IS+  L++ +       +  +  GK+      +
Sbjct: 358 VKQGAVKVDGDKISDPSLKLPI-----GKSYIIQVGKRRIAKLSI 397


>gi|331001116|ref|ZP_08324747.1| tyrosine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329569421|gb|EGG51199.1| tyrosine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 414

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 98/412 (23%), Positives = 173/412 (41%), Gaps = 27/412 (6%)

Query: 12  LSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L +RG    +        L     +   +   +G D TA  +H GH   L  L   Q  G
Sbjct: 22  LIKRGTDTLLVEEELEQKLARSKATGKPLRIKLGLDPTAPDIHLGHTVVLNKLRQFQNLG 81

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +         +          +  
Sbjct: 82  HTVIFLVGDFTSAIGDPSGRNTTRPPLTREQIEANAKTYLDQAYKVLDKD----KTEVRF 137

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +       ++ S +++ R+L  +    R   +  ++  E  Y ++Q YD V L
Sbjct: 138 NSEWCNKLG-SAGFIKLASRYTLARLLERDDFAKRFASQAPIAMHELIYPLMQGYDSVAL 196

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  +++GGSDQ  N++ G +L  +        +T PLL       KM K+    I 
Sbjct: 197 ----EADVELGGSDQRFNLLVGRELQRQYNQEAQCIITMPLLVGLDGVNKMSKSKHNYIG 252

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           + +    P   +    ++ D  + ++   L+     EI   +     G+   +AK ++A 
Sbjct: 253 ITE---EPNEMFGKVMSLSDDLMWNWFDLLSMRSNEEIQQLKKECEAGRNPRDAKVMLAK 309

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H  E A+ A    +  F      +++P +++        MG+L LI +AG A S
Sbjct: 310 EIVTRFHNAEAADAAEQEFINRFRKGAVPENIPEVTLENG--GEAMGILKLIKEAGLAPS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R++    + +N   ++++ LQ++       G   L  GK+      L
Sbjct: 368 TSEAGRNVTQGGVHLNGEKVTDKALQVQP------GTYTLQVGKRKWAKVTL 413


>gi|163848622|ref|YP_001636666.1| tyrosyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526556|ref|YP_002571027.1| tyrosyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669911|gb|ABY36277.1| tyrosyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450435|gb|ACM54701.1| tyrosyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 390

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 174/409 (42%), Gaps = 25/409 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS L  RG    I        L S   +    G+D T   +H GH   L  L   Q+ GH
Sbjct: 3   LSELLRRGVAEVIVESELRARLQSGTPLRLKQGFDPTKPDMHIGHAVGLRKLRAFQELGH 62

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + + ++G  T+ IGDPS RDE+R  + + E++ N E     F   +     +    +   
Sbjct: 63  QVVLIVGDWTAQIGDPSGRDETRTRLSAAEVRANAETYMEQFFRVVD----RQRTEVRWQ 118

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W         L ++   F++ +ML+ E+ R R +    L+ LE  Y +LQAYD V + 
Sbjct: 119 SEWFGQFTLEHAL-DLAGRFTLAQMLAHETFRKRYETGAPLTILELMYPMLQAYDSVAIK 177

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                 ++ GG+DQ  NI+ G +L  +L          PL+    G KM KT +  + + 
Sbjct: 178 ----ADVEFGGTDQKFNILAGRELMAQLGMTPQQVFLVPLIPGTDGRKMSKTFNNTVDIR 233

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIATE 305
                P   +    ++ D  +  + + LT +P++EID M            + K  +A E
Sbjct: 234 ---MPPSEMYGRIMSMSDEVLPLYFEVLTDVPLAEIDEMKLAMAAGQVNPRDLKMRLARE 290

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H    A  A  A +  F      + +PT +++        G++ ++V +G A S 
Sbjct: 291 IVAQFHDPAAAAAAEAAFVRQFVEREIPEDIPTFTLTA-----PSGIVEVLVASGLAPSK 345

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +EARR +    ++++   + +  L +         N+ +  G++  +  
Sbjct: 346 SEARRLIDGGGVRVDGERVEDYALTLSP-----GANVVVQVGRRKFVRV 389


>gi|328914623|gb|AEB55456.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 433

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 134/423 (31%), Positives = 211/423 (49%), Gaps = 21/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  + 
Sbjct: 22  MRDFIQHLQDRGILENFSS--GLDSVST--PVSAYLGFDPTAPSLHIGHWIGICFLRRMA 77

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++          
Sbjct: 78  SFGITPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLSRYLP------GLQ 131

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF
Sbjct: 132 IVNNMDWLKETTVIDFLRDVGKHFRLGAMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDF 191

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ GGSDQWGNI  GID   RL   + + LT PLLT + G K+GKT SG 
Sbjct: 192 AYLFEKHGVCLQCGGSDQWGNITSGIDYIRRLGLGQAYGLTYPLLTNSQGKKIGKTESGT 251

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+ ++TS Y  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A 
Sbjct: 252 IWLDPKLTSAYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAE 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LT 354
            I T +HG +   +A           + S            + +G+ L          + 
Sbjct: 312 TIVTSIHGEDGLREAQIVTQSMHPGKVSSVSEKDFQ-DLIAMGQGVSLERAQALGKRWID 370

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  ++ 
Sbjct: 371 LFVTLGVCSSKGEARRLIEQKGLYVNSEPIENEHSVCEETQVCFDQYVLLAQGKKKKLVL 430

Query: 415 HLC 417
            L 
Sbjct: 431 RLI 433


>gi|303325614|ref|ZP_07356057.1| tyrosine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863530|gb|EFL86461.1| tyrosine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 398

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG + ++ +  EL    ++G  +   +G+D TA  LH GH   +  +   Q+ GH  
Sbjct: 10  LIKRG-VAELIDEGELRKKLARGVPLRVKVGFDPTAPDLHLGHTVVMHKMRHFQELGHTV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T  IGDPS R E+R  +  +++  N E  K      +          +  N  
Sbjct: 69  IFLIGDFTGRIGDPSGRSETRPPLTEEQVLANAETYKKQVFKILDP----EKTQVEFNSR 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +     ++   S+ +V RM+  +    R + ++ +S  EF Y + Q +D V L   
Sbjct: 125 WLSKLDATGFIKLASSY-TVARMMERDDFEKRFREQRPISIHEFLYPLCQGFDSVSLK-- 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNK 249
               ++MGG+DQ  N++ G +L           LT PLL  T    KM K+    I +++
Sbjct: 182 --TDVEMGGTDQKFNLLVGRNLQTHYGQESQCILTMPLLEGTDGVRKMSKSYGNYIGIDE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEI 306
               P   +     + D  +  + + L+   + EI    R           AK+ +A E+
Sbjct: 240 P---PAEIFGKVMGVSDELMWRYYELLSAKSLEEISALKRDVAEGRVHPKAAKEALAHEM 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  H  ++A++A       F         P++S    E S     L     AG   S  
Sbjct: 297 VSRYHSGKDADEARQGFNAVFADGGVPADAPSLSCQYGEDSTPPAFLEA---AGLVKSRG 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA+R +K  A+ ++     +    +   D        +  GKK  +  ++C
Sbjct: 354 EAKRLIKEGALSVDGQRCDDALAPLPAGD------YVIKLGKKRFLKLNVC 398


>gi|167740156|ref|ZP_02412930.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 413

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLAKSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V RML  E    R +    +   EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARMLEREDFTKRFQGGIPILIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI R       G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L++   +F       +  GK+      L
Sbjct: 368 EALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTL 411


>gi|323143032|ref|ZP_08077738.1| tyrosine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322417226|gb|EFY07854.1| tyrosine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 395

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 169/406 (41%), Gaps = 28/406 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    I        L S   +   +G D TA  +H GH   L  L   Q+ GH+ + ++
Sbjct: 13  RGAEEIIPIEELKKKLESGRKLIVKLGMDPTAPDIHLGHTVILNKLRTFQELGHQVVLII 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ +GDPS ++ +R  +  ++I EN +         +         ++  N  WL  
Sbjct: 73  GDFTASVGDPSGKNTTRPQLSREKILENAKTYAEQAFKILDKD----KTIIRYNSEWLGK 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   +    + S  +V RML  +    R +  Q ++  EF Y + Q YD V L       
Sbjct: 129 LGA-EGTIRLASKLTVARMLERDDFTKRYQSGQPIAIHEFLYPLFQGYDSVCLK----AD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         L  PLL       KM K+    I ++    +
Sbjct: 184 IELGGTDQKFNLLMGRELQKDAGQEPQCVLMMPLLVGLDGVKKMSKSAGNYIGVH---DA 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATEITTMV 310
           P + +    ++ D  + ++   L+  P+ EI  +            +AK  +  EI    
Sbjct: 241 PNDMFGKIMSLSDDLMWTYFDLLSFRPLKEIAELKANCASGQMNPRDAKMELGREIVARY 300

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG+EE +KA  + +  F        MP +++          L TL+  +    ST+EA R
Sbjct: 301 HGKEEGDKAVESFINQFAKGAVPDEMPELTL------DNAPLPTLLKNSQLCASTSEAMR 354

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +K NA+KI+  +I+++   I        G      GK+      L
Sbjct: 355 MIKQNAVKIDGKVIADKDEAIA------NGTYVFQVGKRRFARITL 394


>gi|307609371|emb|CBW98858.1| tyrosyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 401

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 175/405 (43%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +  P     L     +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 13  RGCEEILPVPELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL  
Sbjct: 73  GDFTAMIGDPTGKNVTRMPLSQETVLENAKTYQHQVFKILDPD----KTTVAFNSQWLNK 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L       
Sbjct: 129 FNAVDLIRLAATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALK----AD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         + +PL+       KM K+L   I +N+   +
Sbjct: 184 VELGGTDQKFNLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---T 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVH 311
           P   +    ++ D  +  +   L+     EI ++ +   +GK   + K   A EI    H
Sbjct: 241 PEQMFGKIMSVSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +AE A    +E F      + +  +S+    ++  + L  L+ +     ST+E+ R 
Sbjct: 301 DQTQAEFAHNKFIERFQKGNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRM 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+K++   IS+  L++ +       +  +  GK+      +
Sbjct: 358 VKQGAVKVDGDKISDPSLKLPI-----GKSYIIQVGKRRIAKLSI 397


>gi|170732003|ref|YP_001763950.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|169815245|gb|ACA89828.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 413

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 183/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI   +     G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKREAEGGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQPDAERALDDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R++    +KI+ + +S++ L+++  +F       +  GK+      L
Sbjct: 368 EALRNIDQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTL 411


>gi|163854917|ref|YP_001629215.1| tyrosyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163258645|emb|CAP40944.1| tyrS [Bordetella petrii]
          Length = 409

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 104/412 (25%), Positives = 177/412 (42%), Gaps = 29/412 (7%)

Query: 14  ERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L +       +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 20  KRGCDELLVESEFARKLANSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHN 79

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +          +  N 
Sbjct: 80  VIFLIGDFTSMIGDPSGRNSTRPPLTREQIEANAKTYYAQASLVLDPA----RTEIRYNS 135

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W         L ++ S ++V RM+  E    R K    ++  EF Y ++Q YD V L  
Sbjct: 136 EW-SDPLGARGLIQLASRYTVARMMEREDFTKRFKGGVPIAVHEFLYPLMQGYDSVALK- 193

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLN 248
                L++GG+DQ  N++ G +L +         LT PLL  T    KM K+    I ++
Sbjct: 194 ---SDLELGGTDQKFNLLVGRELQKEYGQAPQCVLTMPLLEGTDGVEKMSKSKGNYIGIS 250

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEI 306
           +   SP + +    +I D  +  + + L+   + +I  +      G    +AK  +A EI
Sbjct: 251 E---SPDSMFGKLMSISDTLMWRYFELLSFRSLEDIAALKAGIEAGANPRDAKVALAQEI 307

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H  + AE A  A    F        MP I+I+       +G+L ++ +AG   S  
Sbjct: 308 VARFHSAQAAEAALAAFQARFRDGAMPDDMPEINIA----GAPLGILKVLREAGLVASGA 363

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           EA+R+++   ++++   I ++ LQ++       G   +  GK+     +L G
Sbjct: 364 EAQRNVEQGGVRVDGDRIEDKSLQLQA------GTYVVQVGKRKFARVNLAG 409


>gi|297182357|gb|ADI18524.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_19M20]
          Length = 398

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 105/409 (25%), Positives = 178/409 (43%), Gaps = 22/409 (5%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  RG    +      + L  +  +   +G+D TA  LH GH   L  L   Q  GH+ 
Sbjct: 7   ELLLRGVEEIVPEKEFHEKLKKEKPLRIKLGFDPTAPDLHLGHSVILNKLKLFQDFGHEV 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS  +E+R ++  +EI+ N +  +      +     +    +  N  
Sbjct: 67  IFLIGDFTGLVGDPSGVNETRPVLSEEEIKINAKTYERQVFKILD----RKKTEVRFNSE 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+ +    + +R + S  +V RML  +    R K +Q +S  EF Y +LQ YD   L   
Sbjct: 123 WMKNFTPQEFVR-LSSIQTVARMLERDDFDKRYKSQQPISIHEFLYPLLQGYDSFVLK-- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G ++ +    P    +T PLL       KM ++L   I L  
Sbjct: 180 --ADVELGGTDQKFNLLLGREVQKFYGLPPQSIMTLPLLEGVDGVMKMSQSLGNYIALE- 236

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
              S  + +    +I D  +  +   L+     EI   + A+ +G+     K ++A EI 
Sbjct: 237 --DSSKDMFGKIMSISDKLMWRYYDLLSFKTEKEIKSLKKAQKEGENPRNLKFLLAEEIV 294

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG  E  KA       F       ++  ISI+ +     + L  ++ +AG A ST+E
Sbjct: 295 DRFHGEGEGSKAKKEFTSVFQQGKLPSNIKEISINIE--GSTLTLPKVLKEAGMAISTSE 352

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A R +K  A+KI    I++ K  + L        +    GK+  +   +
Sbjct: 353 ALRLIKQGAVKIEGQKITDPKHNLSL-----NSCLLYQVGKRKFLKITI 396


>gi|254495998|ref|ZP_05108904.1| tyrosyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354786|gb|EET13415.1| tyrosyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 398

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 169/405 (41%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +        L     +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 13  RGCEEVLPQHELEKKLQKGTPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL  
Sbjct: 73  GDFTAMIGDPTGKNVTRMPLSQESVLENAKTYQEQVFKILDPQ----KTTVAFNSQWLGQ 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L       
Sbjct: 129 FTAVDLIRLAATH-TVARMLERDDFNKRYTSGQPIAIHEFLYPLLQGYDSVALK----AD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           ++ GG+DQ  N++ G +L +         + +PL+       KM K+L   I +N+  T 
Sbjct: 184 VEFGGTDQKFNLLMGRELQKHYGHEPQVIMMTPLIEGLDGVKKMSKSLDNYIGINEPAT- 242

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
             + +    ++ D  +  +   L+     EI   + + ++G    + K   A EI    H
Sbjct: 243 --DMFGKIMSVSDELMWRYINLLSFKTGQEIQALKQSVVEGANPRDIKIDFAKEIVARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +AE+     +  F   I    +  +SI  +E    + L  L+ +     ST+E+ R 
Sbjct: 301 DQGQAEQVHKDFIARFQKGIIPADLEEVSIISEE---PIPLAQLLKQMNLTQSTSESIRM 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+K+++  + +  L +            +  GK+     HL
Sbjct: 358 VKQGAVKVDSEKVEDPALVLAA-----GNTYVIQVGKRRIAKLHL 397


>gi|297516892|ref|ZP_06935278.1| tyrosyl-tRNA synthetase [Escherichia coli OP50]
          Length = 295

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 125/284 (44%), Positives = 180/284 (63%), Gaps = 1/284 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMDVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + 
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALE 287


>gi|145630984|ref|ZP_01786760.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983451|gb|EDJ90927.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 385

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 104/391 (26%), Positives = 172/391 (43%), Gaps = 22/391 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    D  +++GG+DQ  N++ G +L +        A+T PLL       KM K
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +    P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           +AG   ST+EA R  +   +KIN   + N K
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK 372


>gi|149909291|ref|ZP_01897947.1| tyrosyl-tRNA synthetase [Moritella sp. PE36]
 gi|149807608|gb|EDM67556.1| tyrosyl-tRNA synthetase [Moritella sp. PE36]
          Length = 398

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/421 (23%), Positives = 173/421 (41%), Gaps = 27/421 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +D L  +  RG    +     +  L     +   +G D T + LH GH   L  L
Sbjct: 1   MTQI-NDALREIK-RGTEEILVEEELVAKLKEGRPLRIKLGADPTGADLHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N +         +     +
Sbjct: 59  RQFQDLGHEVIFLIGDFTATVGDPSGKNSTRPPLTREDVLVNAKTYTDQVFKILD----E 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   +  N TWL  +     +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 115 SKTRIEFNSTWLNELGA-AGIIRLASQQTVARMLERDDFKKRYASGQGIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 174 GYDSVALK----ADVELGGTDQKFNLLMGRELQKAEGQKPQTVIMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEIN 296
           + +  I +     +P   +    +I D  + ++ + L+  P++EI++             
Sbjct: 230 SSNNYIGVT---DAPNEMFGKIMSITDELMWNYFELLSFRPLAEIEKFKADIAADAVNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    AE A     + F  +     MP    +   VS  M +  L+
Sbjct: 287 DVKISLAKEIIARFHDEAAAESAHNDFTQRFSKNSIPDEMPEFDFA---VSDAMAIANLL 343

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG  + T+EA R +K  A+KI++  I + +L          G      GK+      L
Sbjct: 344 KEAGLVSGTSEAMRMIKQGAVKIDSVKIDDTRLVPTA------GTAVYQVGKRKFARITL 397

Query: 417 C 417
            
Sbjct: 398 A 398


>gi|330815554|ref|YP_004359259.1| Tyrosyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367947|gb|AEA59303.1| Tyrosyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 413

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 98/412 (23%), Positives = 184/412 (44%), Gaps = 30/412 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 23  ITKRGVDELLIEDEFAQKLARSEASGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  
Sbjct: 83  HTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLD----REKTEIRY 138

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L
Sbjct: 139 NSEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL 197

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  L++GG+DQ  N++ G +L ++        LT PLL       KM K+ +  + 
Sbjct: 198 ----NADLELGGTDQKFNLLVGRELQKQYGQEPQCILTMPLLEGLDGVEKMSKSKANYVG 253

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           ++++   P + +    +I D  +  + + L+  PM+EI R       G+   + K ++A 
Sbjct: 254 ISEK---PTDMFGKLMSISDVLMWRYFELLSFRPMAEIARFKAEIEAGRNPRDFKVLLAQ 310

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H + +AE+A                +P +++        + +  L+ +AG   S
Sbjct: 311 EIVARFHSQADAERALEDFN-HRAKGGVPDDIPAVTLG----GAPLAIGQLLKQAGLVPS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 366 TSEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTL 411


>gi|107021760|ref|YP_620087.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116688706|ref|YP_834329.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|105891949|gb|ABF75114.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116646795|gb|ABK07436.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 413

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 183/410 (44%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI   +     G+   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKREAEGGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R++    +KI+ + +S++ L+++  +F       +  GK+      L
Sbjct: 368 EALRNIDQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTL 411


>gi|254796724|ref|YP_003081560.1| tyrosyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589972|gb|ACT69334.1| tyrosyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 391

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 170/407 (41%), Positives = 261/407 (64%), Gaps = 20/407 (4%)

Query: 9   LSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I+ ERG+  Q ++   L+    S   +  Y+G+D TAS++H GHL  LML+  ++  G
Sbjct: 2   LKIIEERGYFLQCTDREALERRLHSGEKLVFYLGFDCTASAIHLGHLVPLMLMRLVKSYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+GGGT++IGDPS +D+SR+++  +EI +NI  I  I    I       +   +N
Sbjct: 62  HEVIILLGGGTTLIGDPSGKDKSRKILSREEINKNIGTISKIVKRII------GNVRFVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I+YID LR +G  FS+NRML+F+SV+SRL RE  LSFLEFNYMILQAYDFVEL
Sbjct: 116 NADWLEDIRYIDFLRNVGRHFSINRMLTFDSVKSRLDRESHLSFLEFNYMILQAYDFVEL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +Q+GG DQWGNI+ G++LG +L+  ++F LT PL+TTASG KMGKT +GA+WL
Sbjct: 176 NRLYNCNVQIGGGDQWGNIVNGVELGRKLRNTQMFGLTVPLITTASGKKMGKTEAGAVWL 235

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++ SP+++WQY+RN +D+DV  F +  T LP+ +I  ++     +INE+KK++ATE T
Sbjct: 236 DADLYSPHDYWQYFRNTEDSDVERFLRLFTELPIDKIKTLSACDDAQINESKKVLATEAT 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   AE+ + + ++ F+ +     +P I+I +     G  ++ ++++   A+S  +
Sbjct: 296 RICHGNAIAEEVSASIIKAFEENDP-SQLPEIAIPR-----GSDIIDVVIRIEAASSRTQ 349

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A+R ++S A+KI+   I    + +  Q         +S GKK   I 
Sbjct: 350 AKRLIESGAVKIDKKKILTHSIDLPEQ-------FVVSVGKKQRNII 389


>gi|253575745|ref|ZP_04853080.1| tyrosyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844788|gb|EES72801.1| tyrosyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 417

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 13  SERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             RG +  I    EL         +   +   +G D +A  +H GH   +  L   Q+ G
Sbjct: 21  ISRGVVE-IVPEDELKQKVIQSVVTGKPLKVKLGLDPSAPDIHIGHTVVMQKLRQFQELG 79

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+   ++G  T  IGDP+ + E+R+ +  +++Q N E  +      +          +  
Sbjct: 80  HQVQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAETYRQQIFKILDP----EKTQVNF 135

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + + D+++ + +  +V RML  +    R    Q +S  EF Y ++Q  D V L
Sbjct: 136 NSEWLAPMTFADVVK-LSAKVTVARMLERDDFTKRYTSGQPISIHEFFYPLMQGMDSVAL 194

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  +++GG+DQ  N++ G  L +        A+ +P++       KM K+L   I 
Sbjct: 195 ----ESDIELGGTDQKFNLLMGRTLQKEYGKDTQVAIMTPIIEGLDGVQKMSKSLGNYIG 250

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIA 303
           +++    P   +    ++ D  +  + + +T L + E+  +    K       +AK  +A
Sbjct: 251 IDEA---PNEIYGKAMSVPDELMTKYFELVTDLSLEELAELTEGLKSGAVHPRDAKMKLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFA 362
             +  M HG+E A+ A    +  F      + +    I   E+  G + L+ L+   GFA
Sbjct: 308 HTLVRMYHGQEAADAAQEHFVTVFQQRALPEDIEEKEIPAAELDNGKIRLIKLLTLLGFA 367

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            S  EARR ++  A+K+N   IS+   +++     + G I +  GK+      +
Sbjct: 368 ASNGEARRSIQQGAVKLNEEKISDPNAEVE----LAGGEI-IQVGKRKFAKLSV 416


>gi|172059664|ref|YP_001807316.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|171992181|gb|ACB63100.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 413

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 183/411 (44%), Gaps = 30/411 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 140

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 141 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+    + ++
Sbjct: 198 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEI 306
           ++   P + +    +I D  +  + + L+   + EI    +     +   + K ++A EI
Sbjct: 256 EK---PTDMFGKLMSISDTLMWRYFELLSFRGLDEIAGFKRDAEGGRNPRDFKVLLAQEI 312

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P+++++       + +  L+ +AG   ST+
Sbjct: 313 VARFHSQADAERALEDFN-HRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGLVPSTS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 368 EALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLS 412


>gi|152980601|ref|YP_001351992.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|151280678|gb|ABR89088.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 413

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 179/411 (43%), Gaps = 30/411 (7%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  LH GH   L  +  LQ  GH+
Sbjct: 26  KRGVEELLIESEFAQKLARSEQTGKPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQDLGHQ 85

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+EN +      S  +          +  N 
Sbjct: 86  VIFLIGDFTSMIGDPSGRNITRPPLTKEQIEENAKTYFSQASLVLDP----ERTEIRYNS 141

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W C       + E+ + ++V R+L  E    R K    +S  EF Y ++Q YD V L  
Sbjct: 142 EW-CDPLGARGMIELSAKYTVARILEREDFTKRFKANTPISLHEFLYPLMQGYDSVALQ- 199

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
                L++GG+DQ  N++ G +L +     +   LT PLL       KM K+    I + 
Sbjct: 200 ---SDLELGGTDQKFNLLVGRELQKSYGQEQQCILTMPLLEGLDGVEKMSKSKGNYIGIT 256

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEI 306
           +   + +       +I D  +  + + L+   +SEI +  K     +   + K ++A EI
Sbjct: 257 EPGNTMFA---KLMSISDVMMWRYYELLSFRSLSEIAQFKKEVEGGRNPRDIKVLLAQEI 313

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H  +  E A T  +      I    +P +++S       +G+  L+ +A    ST+
Sbjct: 314 VARFHSVQAGEDALTDFVNRSKGGIPH-DIPEVALS----GAPLGIGQLLKQANLCASTS 368

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R ++   ++I+ ++IS++ L+++       G + +  GK+      L 
Sbjct: 369 EALRMVEQGGVRIDGAVISDKGLKVEA------GTLVVQVGKRKFARVTLA 413


>gi|323527315|ref|YP_004229468.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384317|gb|ADX56408.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 416

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 30/410 (7%)

Query: 14  ERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 28  KRGVDELLIEDEFAQKLAKSQATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 87

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N 
Sbjct: 88  VIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYNS 143

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L  
Sbjct: 144 EWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL-- 200

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+ +  I ++
Sbjct: 201 --NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGIS 258

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           +    P + +    +I D  +  + + L+  PM EI   R     G+   + K ++  EI
Sbjct: 259 ER---PTDMFGKLMSISDTLMWRYFELLSFRPMDEIAAFRKEAEAGRNPRDFKVMLGQEI 315

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H + +AE+A                +P ++++       + +  L+ +A    ST+
Sbjct: 316 VARFHSQADAERALEDFN-HRAKGGVPDDIPAVALA----GAPLAIGQLLKQANLVPSTS 370

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 371 EALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTL 414


>gi|78043825|ref|YP_360390.1| tyrosyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|115305800|sp|Q3ABU4|SYY_CARHZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77995940|gb|ABB14839.1| tyrosyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 411

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 25/413 (6%)

Query: 11  ILSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG    +     ++ L         +   +G D TA  +H GH   L  L   Q  
Sbjct: 11  EIIKRGVAEIVPEEELVEKLKKSLNEGKPLRVKLGLDPTAPDIHLGHTVVLQKLKQFQSL 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I ++G  T+ IGDP+ + E+R+ +  +E+ EN +  +      +          M+
Sbjct: 71  GHEVIIIIGDFTAQIGDPTGKKETRKQLSWEEVLENAKTYQEQIFKILDPA----KTKMV 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + D+++ + S ++V RML  E    R K  Q +S  EF Y ++Q YD V 
Sbjct: 127 FNSEWLAKLTFADVIK-LASKYTVARMLEREDFAKRFKEGQPISIHEFFYPLMQGYDSVA 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G  L +        A+  P+L  T    KM K+L   I
Sbjct: 186 LK----ADIELGGTDQKFNLLMGRTLQKEYGQEPQIAIMMPILEGTDGVQKMSKSLGNYI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            +N+   +P   +    +I D  ++ + + LT++PM  I+ M            +AK  +
Sbjct: 242 GINE---TPQEMFGKIMSIPDTLILRYLELLTSVPMETINEMKIQMETGVLNPRDAKVFL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL-TLIVKAGF 361
           A EI T  H RE A++A    ++ F        +P   +  + +  G+ LL  ++  AG 
Sbjct: 299 AKEIITQYHSREAADEAEREFIKIFREKELPDEIPEYKVPGELIDGGVVLLPKVLFSAGT 358

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             S +EA+R +   A+ +N   I++    +K           +  GK+  +  
Sbjct: 359 VKSISEAKRLISQGAVLVNQEKINDINFVLKPS----KEPYTVKVGKRRFLKI 407


>gi|54296597|ref|YP_122966.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81371093|sp|Q5X7H7|SYY_LEGPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53750382|emb|CAH11776.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 401

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 97/405 (23%), Positives = 174/405 (42%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +  P     L     +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 13  RGCEEILPVPELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL  
Sbjct: 73  GDFTAMIGDPTGKNVTRMPLSQETVLENAKTYQHQVFKILDPD----KTTVAFNSQWLNK 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L       
Sbjct: 129 FNAVDLIRLAATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALK----AD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         + +PL+       KM K+L   I +N+   +
Sbjct: 184 VELGGTDQKFNLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---T 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVH 311
           P   +    ++ D  +  +   L+     EI ++ +   +GK   + K   A EI    H
Sbjct: 241 PEQIFGKIMSVSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +AE A    +E F      + +  +S+   E    + L  L+ +     ST+E+ R 
Sbjct: 301 DQTQAELAHNNFIERFQKGNIPEDLEELSLVIVE---PIALAQLLKQIDLTASTSESIRM 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+K++   IS+  L++ +       +  +  GK+      +
Sbjct: 358 VKQGAVKVDGDKISDPSLKLPI-----GKSYIIQVGKRRIAKLSI 397


>gi|188591234|ref|YP_001795834.1| tyrosyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|170938128|emb|CAP63114.1| TYROSYL-TRNA SYNTHETASE [Cupriavidus taiwanensis LMG 19424]
          Length = 413

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 174/414 (42%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +        L         +   +G D TA  +H GH   L  L  LQ  
Sbjct: 23  EVSRRGCDELLIESEWAQKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDL 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          + 
Sbjct: 83  GHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPA----RTEIR 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R +    +S  EF Y ++Q YD V 
Sbjct: 139 YNSEW-CDPLGARGMIQLAAKYTVARMMERDDFTKRFRSGIPISVHEFLYPLMQGYDSVA 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 198 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 253

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  +   L+  PMSEID  +     G+   + K ++A
Sbjct: 254 GVTEA---PNEMFGKLMSISDDLMWQYFTLLSFRPMSEIDLMKQEIAAGRNPRDCKVLLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AEKA           +    +P +S+        +G+  L+ +A    
Sbjct: 311 QEIVARFHSQADAEKALEDFNHRARGGVP-DDIPAVSLE----GAPLGIAQLLKQANLVP 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ + +S++  ++        G   +  GK+      L 
Sbjct: 366 STSEANRNIEQGGVKIDGATVSDKATRVAA------GTYVVQVGKRRFARVTLA 413


>gi|332981744|ref|YP_004463185.1| tyrosyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699422|gb|AEE96363.1| tyrosyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 404

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 182/414 (43%), Gaps = 28/414 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L IL + G    IS       L         +T  +G D +A  +H GH   L  L   Q
Sbjct: 7   LKILKK-GVAEIISEEDLRKKLEKSHQENKPLTIKLGLDPSAPDIHMGHTVVLRKLKQFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ + ++G  T +IGDP+ + E+R+ +  +++ EN +  +      +         +
Sbjct: 66  DLGHQIVLIIGDFTGMIGDPTGKSETRKQLTREQVLENAKTYQKQIYKILDPD----RTI 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  WL  + + + +  + S ++V+RML  E  + R++ +Q +S  EF Y ++QAYD 
Sbjct: 122 IRFNSEWLAKLSF-EDVIVLCSKYTVSRMLEREDFKKRMESQQPISIHEFFYPLMQAYDS 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSG 243
           + LA      +++GG+DQ  NI+ G  L          A+  P+L  T    KM K+L  
Sbjct: 181 IALA----ADVELGGTDQKFNILMGRTLQREYGQEPQVAMLMPILEGTDGVKKMSKSLGN 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKK 300
            I +N+   SP   +    +I D  ++ + + LT +      E+    +       + K 
Sbjct: 237 YIGINE---SPDEIYGKTMSIPDELIIRYYELLTDIHPDKLNELKEQMESSLLNPRDVKM 293

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A E+ T+ HG + A+ A    +  F        +  I +  D +   + L   +    
Sbjct: 294 ALAKELVTLYHGAQAAQAAEKQFVSIFQKGDIPDDIEEIKVPADVLKDSIWLPRFLADHK 353

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A +++E RR ++  A+KIN    S E +++K  D        +  GK+     
Sbjct: 354 LAPTSSEGRRLIQQGAVKINGQKSSEENVRLKSGD-------IIQVGKRRFAKI 400


>gi|15836774|ref|NP_297462.1| tyrosyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|81548372|sp|Q9PGX7|SYY_XYLFA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|9104963|gb|AAF82982.1|AE003870_8 tyrosyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 418

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 168/411 (40%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG    +        L S   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIERGANEILKFDELERRLRSGRPLRIKAGFDPTAPDLHLGHTVLLNKMRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ ++ +R+ +  +++  N    +      +     +T   +  N  W
Sbjct: 70  FLIGDFTGMIGDPTGKNVTRKPLSHEDVLANARTYEDQVFKVLD----RTLTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D+++      +V RML  +    R   +Q +   EF Y ++Q YD + L    
Sbjct: 126 FGKMSAVDMIKLAAQH-TVARMLERDDFAKRFVSQQPIVIHEFLYPLIQGYDSIALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E    P    LT PLL       KM K+L   I + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRALQEHHGQPPQVVLTMPLLEGLDGVAKMSKSLGNYIGIKEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATEI 306
              P +       I D  +  + + L+    +                  E K  +A E+
Sbjct: 241 ---PIDIVTKTMKIGDDLMWRWIELLSFKISAAEVVALREAVAKSELNPREVKLRLAHEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  +    AEKA            ++  +P   I+    + G+ L+ L+ K+G A S +
Sbjct: 298 VSRFYDNAAAEKAIAGWQAVVTGQGNNNLLPLQKINVP--ADGVRLVALLTKSGLAPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++++  ++ +  L      F       +  GK+N     L 
Sbjct: 356 EAMRKLKERAVRVDGIVVDDAHL-----HFVPGFEGLIQIGKRNFAKVRLV 401


>gi|300309748|ref|YP_003773840.1| tyrosyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072533|gb|ADJ61932.1| tyrosyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 453

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 177/413 (42%), Gaps = 30/413 (7%)

Query: 12  LSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L     S   +   +G D TA  LH GH   L  +  LQ  G
Sbjct: 64  ITKRGIDELLIESEFAQKLARAEQSGQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQNLG 123

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +      +   +  
Sbjct: 124 HQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASLVLDP----SKTEIRY 179

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V RM+  +    R K    +S  EF Y ++Q YD V L
Sbjct: 180 NSEW-CDALGSRGMIQLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQGYDSVAL 238

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +         LT PLL       KM K+    I 
Sbjct: 239 K----SDLELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKSKGNYIG 294

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           + +   + +       +I D  +  +   L+   M+EI   +     GK   + K  +A 
Sbjct: 295 ITEPANTMFAKV---MSISDVMMWRYYDLLSFRSMAEIAGYKAEVDAGKNPRDIKVALAQ 351

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H ++ AE A    +           +P +S++       +G+  L+ +A    S
Sbjct: 352 EIVARFHSQQAAEDALADFVN-RSKGGIPDDIPEVSLT----GAPLGIGQLLKQANLCAS 406

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EA R ++   ++I+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 407 TSEALRMVEQGGVRIDGTVISDKGLKVEA------GQCVVQVGKRKFARVTLA 453


>gi|46579366|ref|YP_010174.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603076|ref|YP_967476.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|81404913|sp|Q72DH6|SYY_DESVH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46448780|gb|AAS95433.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563305|gb|ABM29049.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|311233191|gb|ADP86045.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 398

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 164/408 (40%), Gaps = 25/408 (6%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
            +RG    I        L     +    G+D TA  LH GH   +  L   Q+ GH  I 
Sbjct: 11  IKRGCAELIDEGELRKKLERGTPLRIKAGFDPTAPDLHLGHTVLIHKLRHFQELGHTVIF 70

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T +IGDPS R ++R  +  +++  N E  K      +         ++  N  W+
Sbjct: 71  LIGDFTGLIGDPSGRSDTRPPLTREQVLANAETYKQQVFKILDP----EKTVVDFNSRWM 126

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                 D +  + S ++V RM+  +    R K  + ++  EF Y ++Q YD V L     
Sbjct: 127 GEFGAADFI-RLASRYTVARMMERDDFEKRYKEGRPIAVHEFLYPLVQGYDSVALK---- 181

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L  +        LT PLL       KM K+L   + +++  
Sbjct: 182 ADVELGGTDQKFNLLVGRHLQSQYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIDE-- 239

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
            SP + +    ++ D  +  + + +++  + EI  + +            K+ +A E+TT
Sbjct: 240 -SPADMFGKLMSVSDELMWRYFELISSRSLDEIADLRRKVETGEAHPKLVKESLAYELTT 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG ++A +A       F         P  +    + S     L     AG   S  EA
Sbjct: 299 RYHGEDKAAEAQQGFNAVFAGGGVPDDAPVHACDHGDDSTPPAFLEA---AGLVKSRGEA 355

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +R +K  A+ ++     +    +        G   +  GKK  +   +
Sbjct: 356 KRLIKEGALSVDGVRCDDANSPLAS------GEYVIKLGKKRFLRLTV 397


>gi|321477483|gb|EFX88442.1| hypothetical protein DAPPUDRAFT_305427 [Daphnia pulex]
          Length = 459

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 131/433 (30%), Positives = 210/433 (48%), Gaps = 24/433 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+ L  L+ERG +  +  P  L            Y G+D TA SLH G+L  LM +   Q
Sbjct: 25  SNVLK-LNERGLLQDVFPPPSLALQKLLSQPQCFYAGFDPTADSLHIGNLLVLMTMLHCQ 83

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKYGTGK 120
           + GH+ I+L+GG T++IGDPS +   R  +  + ++EN     E I  IF +  KY   K
Sbjct: 84  RAGHQTIALIGGATALIGDPSGKSSERIALPEENVKENTNVIGENITRIFQNHQKYIWEK 143

Query: 121 TD-----ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    ++NN  W  ++     L   G  F V  MLS  SV+SR+  E  +SF EF+
Sbjct: 144 NRGPLKPVKLVNNADWYNNVSITKFLSTAGRHFRVGAMLSRNSVQSRINSESGISFTEFS 203

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y +LQ YD++ L + Y CR Q+GGSDQ GNI+ G +L  R+   ++F LT PL+T  +G+
Sbjct: 204 YQVLQGYDWLHLLQKYKCRFQIGGSDQMGNIVSGHELISRMGLEEVFGLTIPLVTNEAGS 263

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K+GKT   A+W+    TSPY  +Q++  + D++V    K  T     EI  + + Q  + 
Sbjct: 264 KLGKTAGNAVWITPSKTSPYELYQFFMRVKDSEVEQLLKLFTFCSTDEISTIMEKQTNKP 323

Query: 296 --NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKD-------- 344
               A + +A ++T +VHG    + A       +  S      +    +++         
Sbjct: 324 ESRVAHRKLAQQVTLLVHGENGLKSAERITEALYSKSADSLARLQPSELNETFRGATMVD 383

Query: 345 -EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNI 402
             +     +L +++KA    + N+ARR + +  + IN    ++    + L       G  
Sbjct: 384 ILLEPATSVLDMVMKANCFANENDARRIILAGGLHINQVKCTDYTEILSLGRHILPNGIS 443

Query: 403 KLSFGKKNHIICH 415
            +  GKK++ I  
Sbjct: 444 LIRVGKKHYYIIK 456


>gi|294507638|ref|YP_003571696.1| tyrosyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343966|emb|CBH24744.1| tyrosyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 412

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I    EL         +   +T  +G D +   LH GH   L  L   Q  GH+
Sbjct: 15  RGA-EEIVPEDELAEKLRTSRETDTPLTVKLGCDPSRPDLHLGHTVVLRKLRQFQDFGHR 73

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T +IGDPS R ++R  +  +E +E+ +      +  +          +  N 
Sbjct: 74  AVLIVGDFTGMIGDPSGRSKTRPQLTLEETREHGQSYYEQATRVLDP----NKTEIRYNS 129

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +++   + E+ +  +V +ML  +    R +  Q +S  EF Y + QA D V +  
Sbjct: 130 EWLDEMRF-SDVIELAAQQTVAQMLKRDDFNERYEAGQPISLHEFLYPLAQARDSVHI-- 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++    L E         +  PLL  T    KM K+L  AI + 
Sbjct: 187 --EADVELGGTDQRFNLLLARRLQEANDQAAQVCMMLPLLEGTDGSDKMSKSLDNAIGIA 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           +    P + +    ++ D  +  + + +T +P  ++ ++ +        AK  +A  I  
Sbjct: 245 EA---PEDMYGKTMSVPDDLIYRYVELVTDIPTEQLPKVKRFAESNPRAAKAQLARRIVE 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           M HG E A++A     +          +P  +    E    +GLL L+  A    S +E 
Sbjct: 302 MYHGEEAADRAEEHFEQTVVEGGVPDDLPEYT-PTPEDGAEVGLLNLMRHADLTDSNSEG 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR ++  A+ I+   +++    I   D        L  GK+      
Sbjct: 361 RRMIEQGAVTIDEEKVTDTGRYI---DVAKEAPFVLQVGKRRFARIR 404


>gi|309779823|ref|ZP_07674578.1| tyrosine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308921400|gb|EFP67042.1| tyrosine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 427

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 180/413 (43%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 37  EVSLRGCDELLIAAEWEQKLAKSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 96

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 97  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 152

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 153 YNSEW-CDPLGARGIIQLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 211

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 212 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 267

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            +++    P   +    +I D  + ++   L+  P++EID  +     G+   + K ++A
Sbjct: 268 GISEA---PNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDLMKQEIALGRNPRDCKVMLA 324

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 325 QEIVARFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPLGIAQLLKQAGLCP 379

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST++A R+++   +KI+ ++IS++ L++        G   +  GK+      L
Sbjct: 380 STSDANRNIEQGGVKIDGTVISDKGLKV------DAGTFVMQVGKRRFARVVL 426


>gi|187927475|ref|YP_001897962.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|187724365|gb|ACD25530.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 421

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 180/413 (43%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 31  EVSLRGCDELLIAAEWEQKLAKSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 90

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 91  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDP----SKTEIR 146

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 147 YNSEW-CDPLGARGIIQLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 205

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 206 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 261

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            +++    P   +    +I D  + ++   L+  P++EID  +     G+   + K ++A
Sbjct: 262 GISEA---PNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDLMKQEIALGRNPRDCKVMLA 318

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 319 QEIVARFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPLGIAQLLKQAGLCP 373

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST++A R+++   +KI+ ++IS++ L++        G   +  GK+      L
Sbjct: 374 STSDANRNIEQGGVKIDGTVISDKGLKV------DAGTFVMQVGKRRFARVVL 420


>gi|56964522|ref|YP_176253.1| tyrosyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81365679|sp|Q5WEB8|SYY_BACSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56910765|dbj|BAD65292.1| tyrosyl-tRNA synthetase 2 [Bacillus clausii KSM-K16]
          Length = 414

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 105/410 (25%), Positives = 183/410 (44%), Gaps = 28/410 (6%)

Query: 15  RGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG +  +      + +         +   +G D +A  +H GH   L  L   Q+ GH  
Sbjct: 24  RGVVEVVPKEAFREKIEKSVRTGKPLNIKLGMDPSAPDVHIGHTVVLQKLRQFQEYGHHI 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T  IGDP+ + E+R+++  +++++N +     +   +          +L N  
Sbjct: 84  QLLIGDFTGKIGDPTGKSETRKVLTDEQVKQNAQTYVEQYGKILD----IEKTEILYNSR 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +K+ D+L+  G   +V RML  E    R K  Q +S  EF Y ++Q YD V +   
Sbjct: 140 WLSELKFDDVLKLAGQM-TVARMLEREDFSKRYKTGQPISVHEFFYPLMQGYDSVAM--- 195

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L E     K   LT PL+       KM K+L+  I +++
Sbjct: 196 -ETDIEVGGTDQTFNLLMGRQLQEAYGKEKQVMLTLPLIEGLDGVRKMSKSLNNYIGIDE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEI 306
               P   +    +I D  +V + K  T +PM EI+ + K          +AK  +  + 
Sbjct: 255 A---PNEIFGKAMSIPDELMVKYYKLATDVPMDEIEALEKGLADGSVHPRDAKMRLGHKF 311

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             M HG+E A++A       F      + +P  S    E  + + L+ L+V     +S  
Sbjct: 312 VEMYHGKEAADEAEQYFKTVFQKRALPEDIPVFS---WEGDKEVPLIDLLVTLNMQSSKG 368

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   +KIN   I++    + ++D     N+ +  GK+      L
Sbjct: 369 EARRMIQGGGVKINEQKITDIHTVVSVED-----NMIVQVGKRKFAKLSL 413


>gi|241662005|ref|YP_002980365.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864032|gb|ACS61693.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 421

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 181/413 (43%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 31  EVSLRGCDELLIAAEWEQKLAKSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 90

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +      +   + 
Sbjct: 91  GHQVIFLIGDFTSTIGDPSGRNATRPSLTREQIETNAQTYYRQASMVLDP----SKTEIR 146

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 147 YNSEW-CDPLGARGIIQLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 205

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 206 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 261

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            +++    P   +    +I D  + ++   L+  P++EID  +     G+   + K ++A
Sbjct: 262 GISEA---PNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDLMKQEIALGRNPRDCKVMLA 318

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A           +    +P I +S       +G+  L+ +AG   
Sbjct: 319 QEIVARFHSQADAERALEDFNHRARGGVP-DDIPQIELS----GAPLGIAQLLKQAGLCP 373

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST++A R+++   +KI+ ++IS++ L+++       G   +  GK+      L
Sbjct: 374 STSDANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVL 420


>gi|307730951|ref|YP_003908175.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585486|gb|ADN58884.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 416

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 181/411 (44%), Gaps = 30/411 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLD----REKTEIRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGA-DGMIKLASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL- 200

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  L++GG+DQ  N++ G +L ++    +   LT PLL       KM K+ +  I +
Sbjct: 201 ---NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P + +    +I D  +  + + L+  PM EI   R     G+   + K ++  E
Sbjct: 258 SEK---PTDMFGKLMSISDTLMWRYFELLSFRPMDEIAAFRKEAEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P +++S       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDFN-HRAKGGVPDDIPAVALS----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 370 SEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVSL 414


>gi|317484756|ref|ZP_07943656.1| tyrosyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924008|gb|EFV45194.1| tyrosyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 398

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 170/410 (41%), Gaps = 25/410 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +RG  + I        L     +T   G+D TA  LH GH   +  L   Q+ GH+ 
Sbjct: 9   QLIKRGITNLIDEGELRKKLERGKPLTVKAGFDPTAPDLHLGHTVLIHKLRHFQELGHRV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T  IGDPS R  +R  + ++++  N E  K      +         ++  N  
Sbjct: 69  VFLIGDFTGRIGDPSGRSATRPPLTTEQVIANAETYKEQVFKILDP----EKTVVEFNSR 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL      D +  +GS +++ RM+  +    R +    ++  E  Y ++Q YD V L   
Sbjct: 125 WLNDFTAADFI-RLGSRYTLARMMERDDFAKRYRENTPIALHELLYPLMQGYDSVALK-- 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               ++MGG+DQ  N++ G  L  +        LT PLL       KM K+    I +N+
Sbjct: 182 --ADVEMGGTDQTFNLLVGRTLMGQYDLEPQCILTVPLLEGLDGVRKMSKSYGNYIGINE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
                 + +    ++ D  +  + + +++  + +I  + K   +      +AK+ +A EI
Sbjct: 240 PAA---DQFGKAMSVSDDLMWRYYELISSKSLDDIAALKKDVEEGRLHPKKAKEALAYEI 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               HG ++A++A       F         P  +    E S+       +  +G A S  
Sbjct: 297 VARYHGEDQAQEALQGFNSVFADGGIPDDAPEFACEHGEASKPPV---FLTDSGLAASRG 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA+R +K  ++ ++     + +  ++       G+  +  GKK  +   +
Sbjct: 354 EAKRLIKQGSLSLDGERCDDAETPLEP------GSYVVKLGKKRFLRLTV 397


>gi|83815043|ref|YP_445743.1| tyrosyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|115305822|sp|Q2S238|SYY_SALRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83756437|gb|ABC44550.1| tyrosyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 412

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I    EL         +   +T  +G D +   LH GH   L  L   Q  GH+
Sbjct: 15  RGA-EEIVPEDELAEKLRTSRETDTPLTVKLGCDPSRPDLHLGHTVVLRKLRQFQDFGHR 73

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T +IGDPS R ++R  +  +E +E+ +      +  +          +  N 
Sbjct: 74  AVLIVGDFTGMIGDPSGRSKTRPQLTLEETREHGQSYYEQATRVLDP----NKTEIRYNS 129

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +++   + E+ +  +V +ML  +    R +  Q +S  EF Y + QA D V +  
Sbjct: 130 EWLDEMRF-SDVIELAAQQTVAQMLKRDDFNERYEAGQPISLHEFLYPLAQARDSVHI-- 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++    L E         +  PLL  T    KM K+L  AI + 
Sbjct: 187 --EADVELGGTDQRFNLLLARRLQEANDQAAQVCMMLPLLEGTDGSDKMSKSLDNAIGIA 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           +    P + +    ++ D  +  + + +T +P  ++ ++ +        AK  +A  I  
Sbjct: 245 EA---PEDMYGKTMSVPDDLIYRYVELVTDIPTEQLPKVKQFAESNPRAAKAQLARRIVE 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           M HG E A++A     +          +P  +    E    +GLL L+  A    S +E 
Sbjct: 302 MYHGEEAADRAEEHFEQTVVEGGVPDDLPEYT-PTPEDGAEVGLLNLMRHADLTDSNSEG 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR ++  A+ I+   +++    I   D        L  GK+      
Sbjct: 361 RRMIEQGAVTIDEEKVTDTGRYI---DVAEEAPFVLQVGKRRFARIR 404


>gi|219847373|ref|YP_002461806.1| tyrosyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541632|gb|ACL23370.1| tyrosyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 390

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 170/409 (41%), Gaps = 25/409 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS L  RG    I        L S   +    G+D T   +H GH   L  L   Q+ GH
Sbjct: 3   LSELLSRGVAEVIVESELRARLQSGTPLRLKQGFDPTKPDMHIGHAVGLRKLRAFQELGH 62

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + + ++G  T+ IGDPS RDE+R  + + E++ N E     F   +     +    +   
Sbjct: 63  QVVLIVGDWTAQIGDPSGRDETRARLSAAEVRANAETYMEQFFRVVD----RQRTEVRWQ 118

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W       + L ++   F++ +ML+ E+ R R +    L+ LE  Y +LQAYD V + 
Sbjct: 119 SEWFGQFTLENAL-DLAGRFTLAQMLAHETFRKRYETGAPLTILELMYPMLQAYDSVAIR 177

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                 ++ GG+DQ  NI+ G +L  +L          PL+    G KM KT +  + + 
Sbjct: 178 ----ADVEFGGTDQKFNILAGRELMAQLGMTPQQVFLVPLIPGTDGRKMSKTFNNTVDIR 233

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIATE 305
                P   +    ++ D  +  + + LT +PM+EI  M            + K  +A E
Sbjct: 234 ---MPPTEMYGRIMSMSDEVLPLYFEVLTDVPMAEIAEMKTAMATGQVNPRDLKMRLARE 290

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H    A  A    +  F      + +P  ++         G++ ++V +G A S 
Sbjct: 291 IVAQFHDPAAAAAAEATFIRQFVERELPEDIPNFTL-----EAPTGIVDVLVASGLAPSK 345

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +EARR +    ++++   +    L I         N+ +  G++  +  
Sbjct: 346 SEARRLIDGGGVRVDGERVEGYTLTINP-----GANVVVQVGRRKFVRV 389


>gi|193212254|ref|YP_001998207.1| tyrosyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085731|gb|ACF11007.1| tyrosyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 402

 Score =  302 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 174/414 (42%), Gaps = 26/414 (6%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +  ++ + +LS      +++       L +   +   +G D +   LH GH   L  L  
Sbjct: 12  SIVNNTVEVLSTDELEKKLT-----KSLKTGKPLKIKLGADPSRPDLHLGHSVVLRKLRE 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+ I ++G  T++IGDPS + ++R  + ++E +EN +      S  +        
Sbjct: 67  FQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLTAEEARENGKSYFEQASKILDP----EK 122

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  WL  + + D++  + S ++V RML  +    R K +  +S  EF Y + Q  
Sbjct: 123 TTICYNADWLGKMSFADVI-RLSSHYTVARMLERDDFEKRYKAQAPISIHEFLYPLAQGM 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTL 241
           D V L  +    +++GG+DQ  N++ G DL           +T PLL  T    KM K+L
Sbjct: 182 DSVHLQND----VELGGTDQKFNLLVGRDLQREYGIDPQVCITMPLLVGTDGVEKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
             AI  N    +P + +    +I D  + ++   L          +A+    +  E K+ 
Sbjct: 238 GNAICFN---DTPEDMYGRTLSIPDPLIETYWNLLLPHHSGNDTPVAERVAADPRETKRE 294

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E+    +  +EA KA                +PTI          M ++ ++++   
Sbjct: 295 LAREVVAQYYSTDEAAKAQEHFDRVIVNKQAPSDLPTIEFE----ETSMPIVEMLMQLKA 350

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             S NEARR ++  A++ +   I++    I+         + +  GK+      
Sbjct: 351 FPSKNEARRMIQQGAVQADEQKITDINAVIE----LGENPVIIKAGKRKFFKVK 400


>gi|60593917|pdb|1WQ4|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With L-Tyrosine
          Length = 321

 Score =  302 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 131/319 (41%), Positives = 193/319 (60%), Gaps = 3/319 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 3   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 183 ACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 302

Query: 303 ATEITTMVHGREEAEKAAT 321
           A ++T +VHG E  + A  
Sbjct: 303 AEQVTRLVHGEEGLQAAKR 321


>gi|60593916|pdb|1WQ3|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Comlexed
           With 3-Iodo-L-Tyrosine
 gi|186972908|pdb|2YXN|A Chain A, Structual Basis Of Azido-Tyrosine Recognition By
           Engineered Bacterial Tyrosyl-Trna Synthetase
          Length = 322

 Score =  302 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 131/319 (41%), Positives = 193/319 (60%), Gaps = 3/319 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAAT 321
           A ++T +VHG E  + A  
Sbjct: 304 AEQVTRLVHGEEGLQAAKR 322


>gi|217967872|ref|YP_002353378.1| tyrosyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336971|gb|ACK42764.1| tyrosyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 404

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 176/416 (42%), Gaps = 30/416 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ + I+ E G        +          +   +G D +A  LH GH   L  L   
Sbjct: 13  LKSNVVEIIPEDGLY-----EKLKKAREEGRPLRVKLGADPSAPDLHLGHAVVLRKLKQF 67

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ + ++G  T+ IGDPS R E+R+ +   +++ N    +      +      T A
Sbjct: 68  QDLGHQVVFIIGDFTARIGDPSGRSETRKPLTPDQVKRNALTYQEQVGKILD----VTKA 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +   E W   +K  + +  + S +++ RML  +    R K ++ +   E  Y +LQAYD
Sbjct: 124 EIRYQEEWFGKMKL-EDVLVLTSKYTIARMLERDDFAQRFKEQKPIFIHEIMYPLLQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
            V +       +++GG+DQ  N+I G ++          A+  P+L       KM K+L 
Sbjct: 183 SVAIK----ADIELGGTDQKFNLIVGREIQREYGLEPQVAMLMPILEGLDGKQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAK 299
             I L +    P   +    +I D  ++ + +  T L   EI ++ +   +      +AK
Sbjct: 239 NYIGLTEP---PNEMYGKVMSIPDELIIRYYELATELTKEEIRKIEQEMKEGKLNPRDAK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI  + HG E + KA       F      +++P + IS       + ++ L+ + 
Sbjct: 296 ARLAREIVKIYHGEEASLKAEEEFNRIFRNKELPENVPEVEIS----EPKIWVVKLLTQV 351

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S +EA+R +   A++I+ + I +  L I +          L  GK       
Sbjct: 352 GAAKSNSEAKRLISQGAVEIDGTRIEDINLDITI-----DKPFILRVGKHFFRRIK 402


>gi|113866519|ref|YP_725008.1| tyrosyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|113525295|emb|CAJ91640.1| Tyrosyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 413

 Score =  302 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S+RG    +        L         +   +G D TA  +H GH   L  L  LQ  
Sbjct: 23  EVSKRGCDELLIESEWAQKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDL 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          + 
Sbjct: 83  GHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPA----RTEIR 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       + ++ + ++V RM+  +    R +    +S  EF Y ++Q YD V 
Sbjct: 139 YNSEW-CDPLGARGMIQLAAKYTVARMMERDDFTKRFRSGIPISVHEFLYPLMQGYDSVA 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G +L +         LT PLL       KM K+    +
Sbjct: 198 LK----SDLELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 253

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  +   L+  P++EI+  +     G+   + K ++A
Sbjct: 254 GVTEA---PNEMFGKLMSISDDLMWQYYTLLSFRPLAEIELMKQEIALGRNPRDCKVLLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AEKA           +    +P +S++       +G+  L+ +A    
Sbjct: 311 QEIVARFHSQADAEKALEDFNHRARGGVP-DDIPAVSLT----GAPLGIAQLLKQANLVP 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ + +S++  ++        G   +  GK+      L 
Sbjct: 366 STSEANRNIEQGGVKIDGATVSDKATRVAA------GTYVVQVGKRRFARVTLA 413


>gi|309791774|ref|ZP_07686262.1| tyrosyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226180|gb|EFO79920.1| tyrosyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 395

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 167/409 (40%), Gaps = 25/409 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           ++ L  RG    I        L +   +    G+D T   +H GH   L  L   Q  GH
Sbjct: 8   INELLTRGVAEVIIEAELRQRLAAGQPLRLKQGFDPTKPDMHIGHAVGLRKLRKFQDAGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + + ++G  T+ IGDPS RDE+R  + +  ++ N E     F   +     +    +   
Sbjct: 68  QVVLIVGDWTAQIGDPSGRDETRPRLDAATVRSNAETYMEQFFRVVD----RERTEVRWQ 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W    K    L ++   F++ +MLS E+ R R +    L+ LE  Y +LQAYD V + 
Sbjct: 124 SEWYGDFKLEQAL-DLAGRFTLGQMLSHETFRRRYEEGAKLTILELMYPMLQAYDSVAIQ 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                 ++ GG+DQ  N + G +L  +L       L  PL+    G KMGKT +  + + 
Sbjct: 183 ----SDVEFGGTDQKFNNLAGRELMSQLGMRPQHVLLVPLIPGTDGRKMGKTFNNTVDIT 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATE 305
                P        ++ D  +  + + LT +P++E   I    +       + K  +A E
Sbjct: 239 ---LPPAEMLGKIMSMSDEVLPLYFEVLTDVPLAELAAIRAAMEAGTVNPRDLKMRLARE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           + +  H   +A  A  A +  F        +P  ++S         ++ L+V A  A S 
Sbjct: 296 VVSQFHSPADALAAEEAFVRQFVQRELPTDIPEYALS-----GPTAIIDLMVAAKLAASK 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            EARR +    ++++   +    L +          + +  G++  +  
Sbjct: 351 GEARRLIDGGGVRVDGERVEGYDLSLDP-----GAGVVVQVGRRKFVRV 394


>gi|313672274|ref|YP_004050385.1| tyrosyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939030|gb|ADR18222.1| tyrosyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 400

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 108/412 (26%), Positives = 173/412 (41%), Gaps = 31/412 (7%)

Query: 13  SERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            +RG    IS       L     +   +    G+D TA  LH GH   +  +   Q  GH
Sbjct: 11  IKRGTEEIISEEELKQKLEYSIRNNIPLRVKAGFDPTAPDLHLGHTVLIQKMKHFQDLGH 70

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  T +IGDP+ + E+R+ +  +E+ +N E  K      +          +  N
Sbjct: 71  HVIFLIGDFTGLIGDPTGKSETRKALTIEEVLKNAETYKEQVFKILDPA----KTEIAFN 126

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+  +   D+++   S+ +V RML  +    R    + +S  EF Y ++Q YD V L 
Sbjct: 127 SHWMGKMTSYDMIKLASSY-TVARMLERDDFAKRYSSGKPISIHEFLYPLVQGYDSVALK 185

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G DL          ALT P+L       KM K+L   + +
Sbjct: 186 ----SDVELGGTDQKFNLLVGRDLQRMNGQNPQIALTVPILEGLDGVQKMSKSLGNYVGI 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIAT 304
            ++   P + +    +I D  +  +   L+   + E++R+            +AKK +A 
Sbjct: 242 TEK---PTDMFGKIMSISDQLMFRYYLLLSDKSLEEVERIKNGVESGKIHPMDAKKDLAE 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    HG  EA++A     + F        +       DE      L+ +I K GFA S
Sbjct: 299 EIVKRFHGYVEAKRAREWFEQVFTKKEIPDDIKLFEGKSDE-----KLIDIIKKLGFAPS 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +E RR   + AI IN   I N  L +   +F       L  GK+N     L
Sbjct: 354 NSEVRRLATAGAITINGEKIENVDLSLGAGEF------ILKVGKRNFAKLKL 399


>gi|317051289|ref|YP_004112405.1| tyrosyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946373|gb|ADU65849.1| tyrosyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 404

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 98/409 (23%), Positives = 167/409 (40%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG +  I        L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 12  LIKRGCVELIEEEELRKKLSRDKPLIIKAGFDPTAPDLHLGHTVLMQKLRHFQLLGHEIH 71

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T++IGDPS + E+RRM+  +++  N E  K      +          ++ N  W
Sbjct: 72  FLIGDFTAMIGDPSGKSETRRMLTREDVLANAETYKAQVFKILDP----EKTRVVFNSHW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +     + E+ +  +V RML  +  ++R +    +S +EF Y + Q YD V +    
Sbjct: 128 LYELDI-RAMMELAAKTTVARMLERDDFQNRYRSGGEISLVEFFYPLFQGYDSVAMK--- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L  R    +   +T P+L  T    KM K+L   I + + 
Sbjct: 184 -ADVELGGTDQKFNLLMGRTLQRRYGQEEQIVITMPILEGTDGVNKMSKSLGNYIGVTEP 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIATEIT 307
               +       +I D  +  + + L+      +  + +          E K  +  EI 
Sbjct: 243 ANEMF---GKVMSISDDLMFRYFELLSDRSLADIEALRQGIASGSLHPKEVKVTLGREIV 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG    E+AA    + F    + + MP   +     +    + T I   GFA S  E
Sbjct: 300 DRFHGAGAGEEAARHFEQVFARGENPEEMPVFEVPLGATADK-RICTFIASVGFAKSNGE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR ++   + ++ S I +        +F   G   L  GK+      +
Sbjct: 359 ARRLMEQGGVSLDGSAICD-----SHAEFQVPGECVLKVGKRRFAKIIV 402


>gi|126338727|ref|XP_001377352.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 609

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 125/427 (29%), Positives = 208/427 (48%), Gaps = 24/427 (5%)

Query: 13  SERGFIHQISNPR----ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             RG    I   +    EL  L + G  T Y G+D TASSLH GHL  ++ L   Q+ GH
Sbjct: 179 KMRGLFADIFPAKGVAPELPELLAGGAQTVYCGFDPTASSLHVGHLLPVLGLLHFQRAGH 238

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF-------IKYGTGKT 121
             I+++GG T+ +GDPS R + R  + ++ +++N + ++                G    
Sbjct: 239 HVIAVVGGATARLGDPSGRSKERTALSAERVRDNAKALRASLEQLAAEHRRLFHDGRPWG 298

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +L+N  W   +  +D L  +G  F +  +LS  SV++RL   + +S  EF Y +LQA
Sbjct: 299 TFTVLDNAAWYSHLALVDFLGAVGGSFRMGPLLSRHSVQARLGSPEGMSLAEFLYPVLQA 358

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF  L + Y CR+Q+GGSDQ GNI+ G +   R+    +F +T PL+T+ +G K+GK+ 
Sbjct: 359 YDFYHLHQRYGCRVQLGGSDQLGNIMSGHEFVRRVTGKDVFGITVPLITSTAGAKLGKSA 418

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAK 299
             A+WL++E+TSP+ F+Q++    D  V  + K  T LP+ EI+ + ++     E    +
Sbjct: 419 GNAVWLHRELTSPFEFYQFFVRQPDDCVERYLKLFTFLPLPEIEHIMQMHMKAPEKRGPQ 478

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS----------ISKDEVSRG 349
             +ATE+T  VHG+E    A       +  SI +  + +             S+  +  G
Sbjct: 479 IRLATEVTKFVHGQEGLGSAKRCTQALYHCSIDALEIMSDEELKELFKEAPFSELVLEPG 538

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGK 408
             +L    KA          + +    + IN+  ++N +  + + +     G   L  GK
Sbjct: 539 TSVLDTCRKANAIPDGPRGYQMITEGGVSINHKPVTNPESVLVVGEHILKNGLSLLKIGK 598

Query: 409 KNHIICH 415
           +N  +  
Sbjct: 599 RNFYVIK 605


>gi|126338735|ref|XP_001377943.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 637

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 125/427 (29%), Positives = 208/427 (48%), Gaps = 24/427 (5%)

Query: 13  SERGFIHQISNPR----ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             RG    I   +    EL  L + G  T Y G+D TASSLH GHL  ++ L   Q+ GH
Sbjct: 207 KMRGLFADIFPAKGVAPELPELLAGGAQTVYCGFDPTASSLHVGHLLPVLGLLHFQRAGH 266

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF-------IKYGTGKT 121
             I+++GG T+ +GDPS R + R  + ++ +++N + ++                G    
Sbjct: 267 HVIAVVGGATARLGDPSGRSKERTALSAERVRDNAKALRASLEQLAAEHRRLFHDGRPWG 326

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +L+N  W   +  +D L  +G  F +  +LS  SV++RL   + +S  EF Y +LQA
Sbjct: 327 TFTVLDNAAWYSHLALVDFLGAVGGSFRMGPLLSRHSVQARLGSPEGMSLAEFLYPVLQA 386

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF  L + Y CR+Q+GGSDQ GNI+ G +   R+    +F +T PL+T+ +G K+GK+ 
Sbjct: 387 YDFYHLHQRYGCRVQLGGSDQLGNIMSGHEFVRRVTGKDVFGITVPLITSTAGAKLGKSA 446

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAK 299
             A+WL++E+TSP+ F+Q++    D  V  + K  T LP+ EI+ + ++     E    +
Sbjct: 447 GNAVWLHRELTSPFEFYQFFVRQPDDCVERYLKLFTFLPLPEIEHIMQMHMKAPEKRGPQ 506

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS----------ISKDEVSRG 349
             +ATE+T  VHG+E    A       +  SI +  + +             S+  +  G
Sbjct: 507 IRLATEVTKFVHGQEGLGSAKRCTQALYHCSIDALEIMSDEELKELFKEAPFSELVLEPG 566

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGK 408
             +L    KA          + +    + IN+  ++N +  + + +     G   L  GK
Sbjct: 567 TSVLDTCRKANAIPDGPRGYQMITEGGVSINHKPVTNPESVLVVGEHILKNGLSLLKIGK 626

Query: 409 KNHIICH 415
           +N  +  
Sbjct: 627 RNFYVIK 633


>gi|77461319|ref|YP_350826.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|115305819|sp|Q3K5W9|SYY_PSEPF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77385322|gb|ABA76835.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 399

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 161/408 (39%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEELLVESELIEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKTQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQMGPADFIRLTSQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRGYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
              P   +    +I DA +  + + L+   M EI+             + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDALMWRYFELLSFRSMDEINAFRADVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A   A            +P + ++  E    M +  ++ KAG   ++  A
Sbjct: 298 RFHGEEAAANAHRGAGNRMKDGELPDDLPEVELTAAE---DMPIAAVLNKAGLVKNSAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++ +         +          GKK      L
Sbjct: 355 RDLLASGGVRVDGEVV-DRSFI-----YVLGATHVCQAGKKAFARITL 396


>gi|206900875|ref|YP_002251199.1| tyrosyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739978|gb|ACI19036.1| tyrosyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 405

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 178/416 (42%), Gaps = 30/416 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ + I+ E G        +          +   +G D +A  LH GH   L  L   
Sbjct: 14  LKSNVVEIIPEDGLY-----EKLKKAREEGRPLRVKLGADPSAPDLHLGHAVVLRKLKQF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ + ++G  T+ IGDPS R E+R+ +  +++++N    +      +      + A
Sbjct: 69  QDLGHQVVFIIGDFTARIGDPSGRSETRKPLTPEQVKKNALTYQEQVGKILD----VSKA 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +   E W   +K  + +  + S +++ RML  +    R K ++ +   E  Y +LQAYD
Sbjct: 125 EIRYQEEWFGKMKL-EDVLVLTSKYTIARMLERDDFAQRFKEQKPIFIHEIMYPLLQAYD 183

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
            V +       +++GG+DQ  N+I G ++          A+  P+L       KM K+L 
Sbjct: 184 SVAIK----ADIELGGTDQKFNLIVGREIQREYGLEPQVAMLMPILEGLDGKQKMSKSLG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAK 299
             I L +    P   +    +I D  ++ + +  T LP  E   I++  +       +AK
Sbjct: 240 NYIGLTEP---PNQMYGKVMSIPDELIIRYFELATELPKEEIRKIEQEMREGKLNPRDAK 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI  + HG E + KA       F      +++P + IS       + ++ L+ + 
Sbjct: 297 ARLAREIVKIYHGEEASLKAEEEFNRIFRNKELPENVPEVEIS----EPKIWIVKLLTQV 352

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S +EA+R +   A++I+ + I +  L I +          L  GK       
Sbjct: 353 GAAKSNSEAKRLISQGAVEIDGTRIEDINLDISI-----DKPFILRVGKHFFRRIK 403


>gi|15640651|ref|NP_230280.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591670|ref|ZP_01678906.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|147673048|ref|YP_001216125.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153823558|ref|ZP_01976225.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227080812|ref|YP_002809363.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505747|ref|ZP_04395257.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229509220|ref|ZP_04398705.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519571|ref|ZP_04409014.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608858|ref|YP_002879506.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850865|ref|ZP_05240215.1| tyrosyl-tRNA synthetase 2 [Vibrio cholerae MO10]
 gi|255744152|ref|ZP_05418105.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262155726|ref|ZP_06028850.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262169931|ref|ZP_06037621.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|297580757|ref|ZP_06942683.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|298500747|ref|ZP_07010550.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|81545368|sp|Q9KU92|SYY2_VIBCH RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|9655066|gb|AAF93797.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121546470|gb|EAX56692.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126518927|gb|EAZ76150.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146314931|gb|ABQ19470.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227008700|gb|ACP04912.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012456|gb|ACP08666.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344260|gb|EEO09235.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353792|gb|EEO18728.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357970|gb|EEO22887.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371513|gb|ACQ61936.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846570|gb|EET24984.1| tyrosyl-tRNA synthetase 2 [Vibrio cholerae MO10]
 gi|255738092|gb|EET93484.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262021665|gb|EEY40376.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262030437|gb|EEY49077.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297535173|gb|EFH74008.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297540528|gb|EFH76586.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 395

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSKLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|153801737|ref|ZP_01956323.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|153830951|ref|ZP_01983618.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229512893|ref|ZP_04402360.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229530436|ref|ZP_04419824.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|262189648|ref|ZP_06048030.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|124122702|gb|EAY41445.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|148873564|gb|EDL71699.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229332209|gb|EEN97697.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229350142|gb|EEO15095.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|262034469|gb|EEY52827.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 395

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|229520922|ref|ZP_04410344.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229342155|gb|EEO07151.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 395

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYSNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGSNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|170093041|ref|XP_001877742.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647601|gb|EDR11845.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 474

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 139/443 (31%), Positives = 215/443 (48%), Gaps = 34/443 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RGFIH ++    L +         Y G D TASSLH GHL  LM L      
Sbjct: 30  ELLDDLVRRGFIHDVTRRDHLRVSLQTTQ-GVYAGIDPTASSLHVGHLIPLMCLLHFHLR 88

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM- 125
           GH+ I L+GG T  +GDPS R   R++   ++++ N++ ++    SF        +    
Sbjct: 89  GHRVIPLIGGATGRVGDPSGRSVERQLADVEQVENNVQCLQKSVRSFFSRAVAYAETRHG 148

Query: 126 -----------LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                       +N  W   +  +D L+ +G    VN ML+ ESVR+RL  +Q LSF EF
Sbjct: 149 AVQEERFLPVVESNLKWHSQLTMLDFLQSVGIHARVNTMLNRESVRARLSSQQGLSFTEF 208

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---------LFALT 225
            Y +LQAYDF  L K+++C +Q+GGSDQWGNI+ G++L  RL              + +T
Sbjct: 209 TYQLLQAYDFYHLYKHHNCSIQVGGSDQWGNILAGLELIGRLDDGPSAPATSHTGAYGIT 268

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +PLLTT+SG K GK+   AIWLN + TS ++F+QY+  + DADV  +    T +   +I 
Sbjct: 269 TPLLTTSSGEKFGKSAGNAIWLNPDQTSVFDFYQYFLKVSDADVERYLNLFTLMTSQDIQ 328

Query: 286 RMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----------IHS 333
            +  +     E   A++ +A E+T MVH  E    A T     F+            +  
Sbjct: 329 NVMGVHVDHPEKRVAQRRLAAEVTEMVHTPEGLVNAETLTGLFFESDYAGLKVKDILLAL 388

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           +  P + +  +E  R   +  L  + G A+S + AR  + S  + +N+ ++ + +  I +
Sbjct: 389 KDDPRLVLVSEEEMRATPIYKLASRHGLASSNSAARALVASRGLYVNDIVVCDIQTHIPI 448

Query: 394 QDFDSTGNIKLSFGKKNHIICHL 416
           +         +  GK    I  L
Sbjct: 449 EHLIDGRVAIMRAGKDKICILIL 471


>gi|254292197|ref|ZP_04962965.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150421878|gb|EDN13857.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 395

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSKLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|134093531|ref|YP_001098606.1| tyrosyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|133737434|emb|CAL60477.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Herminiimonas arsenicoxydans]
          Length = 413

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 182/422 (43%), Gaps = 33/422 (7%)

Query: 6   SDFLSI---LSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLM 58
           SD +     +++RG    +        L     S   +   +G D TA  LH GH   L 
Sbjct: 15  SDAVQEALTVAKRGVEELLIESEFAQKLARSEQSGKPLRIKLGLDPTAPDLHLGHTVVLN 74

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            +  LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I EN +      S  +    
Sbjct: 75  KMRQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQISENAKTYFSQASLVLDPA- 133

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +  N  W C       + E+ + ++V R+L  E    R +    +S  EF Y +
Sbjct: 134 ---RTEIRYNSEW-CDPLGARGMIELSAKYTVARILEREDFTKRFQSNTPISLHEFLYPL 189

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKM 237
           +Q YD V L       L++GG+DQ  N++ G +L +     +   LT PLL       KM
Sbjct: 190 MQGYDSVALK----SDLELGGTDQKFNLLVGRELQKSYGQEQQCILTMPLLEGLDGVEKM 245

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
            K+    I + +   + +       +I D  +  + + L+   ++EI +  K     +  
Sbjct: 246 SKSKGNYIGITEPGNTMFA---KLMSISDVMMWRYYELLSFRSLAEITQFRKDVEGGRNP 302

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            + K ++A EI    H  + AE A    +           +P +++S       +G+  L
Sbjct: 303 RDVKVLLAQEIVARFHSVQAAEDALADFVN-RSKGGIPDDIPELALS----GAPLGIGQL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +A    ST+EA R ++   ++I+ ++IS++ L+++       G + +  GK+      
Sbjct: 358 LKQANLCASTSEALRMVEQGGVRIDGAVISDKALKVEA------GTVVVQVGKRKFARVT 411

Query: 416 LC 417
           L 
Sbjct: 412 LS 413


>gi|327483435|gb|AEA77842.1| Tyrosyl-tRNA synthetase cluster 1 [Vibrio cholerae LMA3894-4]
          Length = 395

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/419 (22%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGSNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|218886452|ref|YP_002435773.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757406|gb|ACL08305.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 399

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 163/410 (39%), Gaps = 25/410 (6%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
            +RG    I        +     +    G+D TA  LH GH   +  L  LQ+ GH  I 
Sbjct: 11  IKRGMAELIDEAELRKKIARGAPLRIKAGFDPTAPDLHLGHTVLIHKLRHLQELGHTVIF 70

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T  IGDPS R ++R  +  ++I EN E  K      +          +  N  W+
Sbjct: 71  LIGDFTGQIGDPSGRSDTRPPLTPEQILENAETYKKQVFKILDP----EKTEVDFNSRWM 126

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            +         + S ++V RML  +    R +  + ++  EF Y ++Q YD V L     
Sbjct: 127 -NAFSAADFVRLASRYTVARMLERDDFEKRYRDGRPIAIHEFLYPLVQGYDSVALR---- 181

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L  +        LT PLL       KM K+L   + +++  
Sbjct: 182 ADVELGGTDQKFNLLVGRTLQSQYGQEPQCILTVPLLEGLDGVKKMSKSLGNYVGIDEP- 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITT 308
             P + +    ++ D  +  + + ++   + +I  M +            K+ +A EIT 
Sbjct: 241 --PSDMFGKIMSVSDDLMWRYYELVSARSLDDIADMKRRVQAGEAHPKAVKEDLAFEITA 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG ++A +A       F         P  S  + E S     L     AG   S  EA
Sbjct: 299 RYHGDDKAAEARQGFNAVFAGGGVPDDAPEHSCPQGEDSTPPVFLEA---AGLVKSRGEA 355

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +R +K  A+ ++     +    +        G+  +  GKK  +   + G
Sbjct: 356 KRLIKEGALSVDGVRCDDAMAPLAP------GSYVVKLGKKRFLRLTVTG 399


>gi|229525283|ref|ZP_04414688.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338864|gb|EEO03881.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 395

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKKQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|33241703|ref|NP_876644.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33236212|gb|AAP98301.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 422

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 139/424 (32%), Positives = 218/424 (51%), Gaps = 21/424 (4%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +    +L  L ER  +   +    L+ +  +G + AY+G+D TA +LH GH   +  L  
Sbjct: 9   SLMQSWLQSLQERNILENFT--AGLESV--EGPIAAYLGFDPTAPALHIGHWIGICFLKR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           L   G  PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++        
Sbjct: 65  LAALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYLP------G 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++NN  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+Y
Sbjct: 119 VTLVNNADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT S
Sbjct: 179 DFYHLFKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTES 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           G +WL+ ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +
Sbjct: 239 GTVWLDSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFV 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SISKDEVSRGMGL 352
           A +I + +HG    E+A +        ++ S                S+ K EV  G   
Sbjct: 299 AQDILSAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGASLDKSEV-LGKRW 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  +
Sbjct: 358 LDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKL 417

Query: 413 ICHL 416
           + +L
Sbjct: 418 VLYL 421


>gi|302679374|ref|XP_003029369.1| hypothetical protein SCHCODRAFT_58262 [Schizophyllum commune H4-8]
 gi|300103059|gb|EFI94466.1| hypothetical protein SCHCODRAFT_58262 [Schizophyllum commune H4-8]
          Length = 486

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 142/444 (31%), Positives = 218/444 (49%), Gaps = 39/444 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             S L +RGF+   + P +L     +   T Y G D TA SLHAGHL  LM LF     G
Sbjct: 39  LYSDLKKRGFVADATRPDDLGNALQRSQQTVYAGIDPTAPSLHAGHLLYLMCLFRFHAAG 98

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK------- 120
           HK I L+GG T ++GDP+ R  +R       +++N+  ++     F +  T         
Sbjct: 99  HKIIPLIGGATGLLGDPTGRRTARDPANKSVVEQNVASLEAALRKFFEGATKYAEARGIS 158

Query: 121 -----TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                +D  + +N  W      +D    +GS   +N ML+ ESVR+RL  +  +S+ EF+
Sbjct: 159 TRGVLSDLQVKSNLEWHKDFSMLDFFMVVGSHARMNTMLNKESVRTRLTSKDGMSYTEFS 218

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-------------F 222
           Y +LQAYDF  L +NY C +Q+GGSDQWGNI+ G++L  RL+                 F
Sbjct: 219 YQLLQAYDFYHLFRNYGCTIQVGGSDQWGNIVSGLELIARLEGEDAVENPSETKVSSRCF 278

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT+PLLTTASG K GK+   A+WL+ ++TSP+ F+QYW   +D DV  + K  T +  +
Sbjct: 279 GLTTPLLTTASGEKFGKSAGNAVWLDTKLTSPFAFYQYWILTEDKDVEKYLKLFTLVSDA 338

Query: 283 EIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           EI+ + +          A++ +A E+T +VH +   E A  A    F  +         S
Sbjct: 339 EIESVMQEHNAAPHKRIAQRRLAAEVTELVHQKSGRELAEKATRLMFGDAGDMTASEVFS 398

Query: 341 ----------ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                     + + ++  G  + +L  + G   S +EARR  KS    +N+ ++  E   
Sbjct: 399 ALKGDPRLVLLDEGDL-VGARIFSLATEHGLVASKSEARRLGKSKGFYVNHGVVG-EDRA 456

Query: 391 IKLQDFDSTGNIKLSFGKKNHIIC 414
           ++ +D        L  GK N ++ 
Sbjct: 457 LEREDLIEGKFAVLRAGKSNVLVV 480


>gi|15618276|ref|NP_224561.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|4376637|gb|AAD18505.1| tyrosyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
          Length = 422

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 138/424 (32%), Positives = 217/424 (51%), Gaps = 21/424 (4%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +    +L  L ER  +   +    L+ +  +G + AY+G+D TA +LH GH   +  L  
Sbjct: 9   SLMQSWLQSLQERNILENFT--AGLESV--EGPIAAYLGFDPTAPALHIGHWIGICFLKR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           L   G  PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++        
Sbjct: 65  LAALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYLP------G 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++NN  WL  I  ID L +IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+Y
Sbjct: 119 VTLVNNADWLQEISLIDFLGDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT S
Sbjct: 179 DFYHLFKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTES 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           G +WL+ ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +
Sbjct: 239 GTVWLDSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFV 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SISKDEVSRGMGL 352
           A +I + +HG    E+A +        ++ S                S+ K EV  G   
Sbjct: 299 AQDILSAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGASLDKSEV-LGKRW 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  +
Sbjct: 358 LDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKL 417

Query: 413 ICHL 416
           + +L
Sbjct: 418 VLYL 421


>gi|163751948|ref|ZP_02159160.1| tyrosyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328164|gb|EDP99330.1| tyrosyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 398

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 174/420 (41%), Gaps = 25/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M      F  I  +RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLDQAFAEI--KRGTDEILLEAELLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH  I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHDVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N TWL  +     +  + S  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIVFNSTWLEPLGA-AGMIRLASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           + +  I +++     +       +I D  +  + + L+  P++EI++            +
Sbjct: 230 SANNYIGVSEPAGEMF---GKIMSISDVLMWRYFELLSFRPLAEIEQFKADIEAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    A+ A    +  F        +  + +S   V  G+ +  L+ 
Sbjct: 287 IKIALAKEIIARFHDEAAADAAHQEFINRFQKGAIPDDIEEVELS---VGDGIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + GF  ST++A R +K  A KI+   I + +LQ+         +     GK+      L 
Sbjct: 344 ELGFVKSTSDAMRMIKQGAAKIDGVKIKDTRLQLTA-----GTSGIFQVGKRKFAKVTLV 398


>gi|303258283|ref|ZP_07344290.1| tyrosine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859036|gb|EFL82120.1| tyrosine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 414

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 99/412 (24%), Positives = 173/412 (41%), Gaps = 27/412 (6%)

Query: 12  LSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L +RG    +        L     S   +   +G D TA  +H GH   L  L   Q  G
Sbjct: 22  LIKRGTDTLLVEEELEQKLARSKASGKPLRIKLGLDPTAPDIHLGHTVVLNKLRQFQNLG 81

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +         +          +  
Sbjct: 82  HTVIFLVGDFTSAIGDPSGRNTTRPPLTREQIEANAKTYLDQAYKVLDKD----KTEVRF 137

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +       ++ S +++ R+L  +    R   +  ++  E  Y ++Q YD V L
Sbjct: 138 NSEWCNKLG-SAGFIKLASRYTLARLLERDDFAKRFASQAPIAMHELIYPLMQGYDSVAL 196

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  +++GGSDQ  N++ G +L  +        +T PLL       KM K+    I 
Sbjct: 197 ----EADVELGGSDQRFNLLVGRELQRQYNQEAQCIITMPLLVGLDGVNKMSKSKHNYIG 252

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           + +    P   +    ++ D  + ++   L+     EI   +     G+   +AK ++A 
Sbjct: 253 ITE---EPNEMFGKVMSLSDDLMWNWFDLLSMRSNEEIQQLKNECEAGRNPRDAKVMLAK 309

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H  E A+ A    +  F      +++P +++  +     MG+L LI +AG A S
Sbjct: 310 EIVTRFHNAEAADAAEQEFINRFRKGAVPENIPEVTLENN--GEAMGILKLIKEAGLAPS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T EA R++    + +N   ++++ LQ++       G   L  GK+      L
Sbjct: 368 TTEAGRNVTQGGVHLNGKKVTDKALQVQP------GTYTLQVGKRKWAKVTL 413


>gi|256370627|ref|YP_003108452.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009419|gb|ACU52779.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 427

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 151/424 (35%), Positives = 227/424 (53%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +     RG IH  +             +T Y G+D T+ SLH G+L  +++L   +++
Sbjct: 2   NLIQEFLWRGLIHNTTY----SKKIKNEKITLYTGFDPTSKSLHIGNLVAIIMLIHFKRS 57

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+K IS++GGGT +IGDPS ++  R +++ + +Q+NI+ IK   S F+ +        +L
Sbjct: 58  GNKIISVIGGGTGMIGDPSGKNSERIIIKKESLQKNIKNIKKQLSFFLDF----NSNEIL 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL    +ID  ++IG +F +N MLS +S++ R+ ++ S+SF EF Y +LQAYDF+ 
Sbjct: 114 NNYEWLKKTLFIDFAKDIGKYFPINYMLSKDSIKKRISKKNSISFTEFTYQLLQAYDFLY 173

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS-GAI 245
           L K  +C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT     I
Sbjct: 174 LYKKKNCSLQIGGSDQWGNITSGIELIRKKLGIKVNGLTFPLITKLDGSKFGKTEKGDNI 233

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
           W++  +TSPY F+Q+W NI D     + K  T L   EI  +     K  N    +K IA
Sbjct: 234 WIDPNLTSPYEFYQFWINISDDQAKKYIKIYTFLKKEEIKEIIFFHEKNPNLKLIQKKIA 293

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-----------DEVSRGMGL 352
           +EIT  VHG++  EK    +   F       ++    I              +++  + +
Sbjct: 294 SEITIFVHGKKIFEKIKFISNILFKKEKILTNLSKNDIKSIYENIPHKNLFIDINFKIPI 353

Query: 353 LTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L L+V K+ F  S  EA RHLK N+I IN  II  E   +K +D  S   + L  GKKN 
Sbjct: 354 LDLLVNKSNFIKSKKEAIRHLKCNSILINKKIIK-ENFFLKKKDLISESYVLLQKGKKNF 412

Query: 412 IICH 415
            +  
Sbjct: 413 FMIK 416


>gi|269303236|gb|ACZ33336.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 412

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 140/422 (33%), Positives = 217/422 (51%), Gaps = 21/422 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
              +L  L ER  +   +    LD +  +G + AY+G+D TA +LH GH   +  L  L 
Sbjct: 1   MQSWLQSLQERNILENFT--AGLDSV--EGPIAAYLGFDPTAPALHIGHWIGICFLKRLA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++          
Sbjct: 57  ALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYLP------GVT 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  I  ID LR+IG  F + +ML+ ++++ R+  ++ +S+ EF+Y+ILQ+YDF
Sbjct: 111 LVNNADWLQEISLIDFLRDIGKHFRLGQMLAKDTIKQRVHSDEGISYTEFSYLILQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT SG 
Sbjct: 171 YHLFKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +A 
Sbjct: 231 VWLDSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQ 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SISKDEVSRGMGLLT 354
           +I   +HG    E+A +        ++ S                S+ K EV  G   L 
Sbjct: 291 DILRAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGASLDKSEV-LGKRWLD 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  ++ 
Sbjct: 350 LFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKLVL 409

Query: 415 HL 416
           +L
Sbjct: 410 YL 411


>gi|153217135|ref|ZP_01950899.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113828|gb|EAY32648.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 395

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 172/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      ++     
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILEPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|152983821|ref|YP_001346204.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150958979|gb|ABR81004.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 399

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 163/408 (39%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +   ++ EN E  K      +      +   +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTRDQVLENAETYKSQVFKILDP----SRTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   I + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EI+  R     G    + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSMDEIEGFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S  E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKDGELPEDLPEIELSAAE---DMPVASVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L +  ++++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGGVRVDGEVV-DRSFVLTL-----GETRVFQAGKKAFARITL 396


>gi|21673398|ref|NP_661463.1| tyrosyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81791709|sp|Q8KEW9|SYY_CHLTE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21646497|gb|AAM71805.1| tyrosyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 406

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 172/414 (41%), Gaps = 26/414 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            + L I+     +  IS       L     +   +   +G D +   LH GH   L  L 
Sbjct: 7   KEQLDIIVN-NTVEVISTDELERKLTKSLKNGTPLKIKLGADPSRPDLHLGHSVVLRKLR 65

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GH+ I ++G  T++IGDPS + ++R  + ++E +EN +      S  +       
Sbjct: 66  EFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLTAEEARENGKSYFEQASKILDP----E 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  WL  + + D++  + S ++V RML  +    R + +  +S  EF Y + Q 
Sbjct: 122 KTTICYNADWLSQMHFADVI-RLSSHYTVARMLERDDFEKRYRSQTPISIHEFLYPLAQG 180

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKT 240
            D V L  +    +++GG+DQ  N++ G DL           +T PLL  T    KM K+
Sbjct: 181 MDSVHLKND----VELGGTDQKFNLLVGRDLQREYGIEPQVCITMPLLVGTDGSEKMSKS 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L  AI  N    +P + +    +I D+ + ++   L          +A+    +  E K+
Sbjct: 237 LGNAICFN---DTPEDMYGRTLSIPDSLIETYWNLLVPHHSGNDKPIAERIAADPRETKR 293

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A E+    +  EEA KA                +PT+          M ++ L++   
Sbjct: 294 ELARELVAQYYSAEEAAKAQEHFDRVIVNKQAPTDLPTVEFE----EATMPVVELLMALA 349

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              S NEARR ++  A++  N  IS+    I+     +   + +  GK+     
Sbjct: 350 AFPSKNEARRMIQQGAVQAGNEKISDINAVIE----LTENPVIIRAGKRKFFKV 399


>gi|54293559|ref|YP_125974.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81369183|sp|Q5WYX4|SYY_LEGPL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53753391|emb|CAH14844.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 401

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 174/405 (42%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +  P     L     +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 13  RGCEEILPVPELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL  
Sbjct: 73  GDFTAMIGDPTGKNVTRMPLSQETVLENAKTYQHQVFKILDPD----KTTVAFNSQWLNK 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L       
Sbjct: 129 FNAVDLIRLAATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALK----AD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         + +PL+       KM K+L   I +N+   +
Sbjct: 184 VELGGTDQKFNLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---T 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVH 311
               +    ++ D  +  +   L+     EI ++ +   +GK   + K   A EI    H
Sbjct: 241 SEQMFGKIMSVSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +AE A    +E F      + +  +S+    ++  + L  L+ +     ST+E+ R 
Sbjct: 301 DQTQAEFAHNKFIERFQKGNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRM 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+K++   IS+  L++ +       +  +  GK+      +
Sbjct: 358 VKQGAVKVDGDKISDPSLKLPI-----GKSYIIQVGKRRIAKLSI 397


>gi|183220957|ref|YP_001838953.1| tyrosyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911052|ref|YP_001962607.1| tyrosyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775728|gb|ABZ94029.1| Tyrosine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779379|gb|ABZ97677.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase; TyrRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 408

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 184/416 (44%), Gaps = 27/416 (6%)

Query: 10  SILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             L    RG +  IS    L+ + S+  +T   G+D TA  LH GH   L  L   Q  G
Sbjct: 9   QELETIRRGTVEIISEAELLEKIKSKPSLTIKAGFDPTAPDLHLGHFVLLRKLKHFQDLG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+   ++G  T++IGDP+ + E+R+ +  +E+ EN +  +      +          +L 
Sbjct: 69  HEVCFMLGDFTAMIGDPTGKSETRKRLSKEEVLENSKTYQSQVFKILDPQ----KIKILY 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +K+ + +  + S ++V+RML  +    R K    +S +EF Y ++Q YD V +
Sbjct: 125 NSHWCSELKF-EDVLVLTSKYTVSRMLERDDFTKRHKAGTPISMIEFLYPLVQGYDSVAM 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G DL           +T PLL       KM K+L   + 
Sbjct: 184 K----SDVELGGTDQKFNMLVGRDLQREYGQKPQAVITLPLLVGLDGVKKMSKSLGNYVG 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIA 303
           + ++   P + +    +I D  + ++ + LT LP++E++      + +     E K  +A
Sbjct: 240 IIEK---PIDMYGKIMSISDDLMWNYFELLTDLPLAEVETKKEGIRTKALHPKEVKTELA 296

Query: 304 TEITTMVHGREEAEKA--ATAAMECFDMSIHSQHMPTISISKDEVSRGMG-LLTLIVKAG 360
             I   +H +E+  KA     A+           +PT ++     +     L+ ++ +  
Sbjct: 297 LLIMDQLHPKEDNRKAVEEWTAIHNTKNRALPDEIPTETLDPSYFAEKPPLLVYVLSQLK 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHIICH 415
           F  S +E RR +++  + ++   I++  L ++           +  GKK   +   
Sbjct: 357 FIPSVSEGRRLIQAGGLYLDEEKITDSSLALEP-----GKEYLIRQGKKGKFLKIK 407


>gi|308069708|ref|YP_003871313.1| Tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase) (TyrRS 2)
           [Paenibacillus polymyxa E681]
 gi|305858987|gb|ADM70775.1| Tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase) (TyrRS 2)
           [Paenibacillus polymyxa E681]
          Length = 417

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 176/416 (42%), Gaps = 28/416 (6%)

Query: 11  ILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +RG + +I    EL         S   +   +G D +A  +H GH   +  L   Q+
Sbjct: 19  EVIQRG-VAEIVPEDELKRKVIKSVVSGEPLKIKLGLDPSAPDIHIGHTVVMHKLRQFQE 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   ++G  T  IGDP+ + E+R+ +  +++Q N +  K      +          +
Sbjct: 78  LGHQVQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAQTYKEQIFKILDP----EKTKV 133

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  + + D++  + +  +V RML  +    R +    +S  EF Y ++Q  D V
Sbjct: 134 FYNSEWLGPMSFADVVT-LSAKVTVARMLERDDFTKRYQNGLPISIHEFFYPLMQGMDSV 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
            L       +++GG+DQ  N++ G  L +         +T PLL       KM K+L   
Sbjct: 193 ALQ----SDIELGGTDQKFNLLMGRTLQKEYGVEPQATITLPLLEGLDGVQKMSKSLGNY 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKI 301
           I +++    P   +    ++ D  ++ + +  T +   E+  +AK          +AK  
Sbjct: 249 IGVDE---EPNEIYGKSMSVPDELMLKYFELATDINNEELAELAKGVKDGSVHPRDAKMK 305

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAG 360
           +A  +  M HG E  E A    +  F        +   +++ D++   G+ ++ L+   G
Sbjct: 306 LAGTLVRMYHGEEAEEAAKQHFVTVFQQRALPDDIEEFTLTADQLEEGGIRVIQLLTHLG 365

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           FA S  EA+R ++  ++KIN    ++       ++ D      +  GK+      L
Sbjct: 366 FAASNGEAKRSIQQGSVKINEEKWTDVNEAYTPKEGD-----IVQVGKRKFAKIKL 416


>gi|226946610|ref|YP_002801683.1| tyrosyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226721537|gb|ACO80708.1| tyrosyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 399

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 168/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L S   +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEEVLVEADLVEKLKSGQPLRVKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +   ++ EN E  K      +          ++ N  W
Sbjct: 70  FLVGDFTGMIGDPTGKSATRPPLTRDQVLENAETYKAQVFKILDPA----KTEVVFNSAW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S  +V RML  +    R    QS++  EF Y ++Q YD V L    
Sbjct: 126 IEQLTPADFV-RLTSHCTVARMLERDDFSKRYAANQSIALHEFLYPLMQGYDSVALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRVYGQKSQCIVTMPLLEGLDGVKKMSKSLGNYVGIQEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
              P   +    +I D+ +  + + L+   M EID  R    +G    + K  +A EI T
Sbjct: 241 ---PGVMYGKLVSIPDSLMWRYFELLSFRSMEEIDAFRSEVDRGANPRDIKIKLAEEIVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG   A  A  +A          + +P I +   E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEVAAANAHRSAGNRMKDGELPESLPEIQLLSTE---DMPIAAVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++ +++ +         F          GKK+     L
Sbjct: 355 RDLLSSGGVRVDGAVV-DRGFL-----FQLGSTHVCQAGKKSFAKIIL 396


>gi|329909301|ref|ZP_08275030.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546501|gb|EGF31486.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 424

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 171/413 (41%), Gaps = 30/413 (7%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +        L     +   +   +G D TA  LH GH   L  +  LQ  G
Sbjct: 35  ITKRGVDELLIESEFAQKLARSELTGKPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQDLG 94

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I++N +      S  +          +  
Sbjct: 95  HTVIFLIGDFTSMIGDPSGRNITRPALTKEQIEDNAKTYFAQASLVLD----AERTEIRY 150

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W C       + ++ S ++V R+L  E    R K    +S  E  Y ++Q YD V L
Sbjct: 151 NSEW-CDPLGARGMIQLSSKYTVARILEREDFTKRFKAGTPISVHELLYPLMQGYDSVAL 209

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L +         LT PLL       KM K+    I 
Sbjct: 210 H----ADLELGGTDQKFNLLVGRELQKDWGQEPQCILTMPLLEGLDGVEKMSKSKGNYIS 265

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           + +   S +       +I D  +  + + L+   ++E+ +        +   + K  +A 
Sbjct: 266 ITEPANSMFAKV---MSISDTMMWRYYELLSARSLAELAQFKTDVEGGRNPRDIKVALAQ 322

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H ++    A           I    +P + +        +G+  L+ +A    S
Sbjct: 323 EIVTRFHNQQAGVDALADFDNRARGGIP-DDIPEVQLG----GAPLGIGQLLKQANLCAS 377

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EA R ++ N ++I+   IS++ L+++       G   L  GK+      L 
Sbjct: 378 TSEALRMVEQNGVRIDGVAISDKALKVEA------GTFVLQVGKRKFARVTLS 424


>gi|60593716|pdb|1VBN|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With Tyr-Ams
 gi|60593717|pdb|1VBN|B Chain B, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With Tyr-Ams
          Length = 318

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 130/318 (40%), Positives = 192/318 (60%), Gaps = 3/318 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 1   NLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+  
Sbjct: 61  GHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFV 185
           NN  W  ++  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF 
Sbjct: 121 NNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+
Sbjct: 181 CLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+          +   A+ ++A
Sbjct: 241 WLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVLA 300

Query: 304 TEITTMVHGREEAEKAAT 321
            ++T +VHG E  + A  
Sbjct: 301 EQVTRLVHGEEGLQAAKR 318


>gi|297172518|gb|ADI23489.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_40P16]
          Length = 398

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 170/415 (40%), Gaps = 22/415 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             D    L  RG    I     L+ L  +  +    G+D TA  LH GH   L  L   Q
Sbjct: 1   MKDIELDLLLRGVEEVIPKKDFLEQLKKRRPLRIKAGFDPTAPDLHLGHTVLLNKLKLFQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I L+G  T ++GDPS  +E+R ++  +EI +N E  K      +          
Sbjct: 61  DLGHQIIFLIGDFTGLVGDPSGVNETRPVLSEKEISKNSETYKKQVFKILDPK----KTE 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W+ +    + ++   S  +V RML  +    R K +Q +S  EF Y +LQ YD 
Sbjct: 117 IRFNSEWMNNFSSEEFIKLSSS-QTVARMLERDDFEKRYKSQQPISIHEFLYPLLQGYDS 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSG 243
           V L       +++GG+DQ  N++ G ++ +         LT PLL       KM K+   
Sbjct: 176 VVLK----TDIELGGTDQKFNLLLGREVQKFYGLSPQSVLTLPLLEGLDGEKKMSKSFGN 231

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + +       +       +I D  +  + + L+     EI     ++ +G+     K I
Sbjct: 232 YLAIEDSRDEMF---GKLMSISDQLMWRYFQLLSFKTDKEIKNLEKSQKEGENPRNIKFI 288

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    HG  E  KA    +  F        +  I I   E  + + L  ++ +A  
Sbjct: 289 LAEEIVDRFHGTGEGSKARNEFILRFQKGKLPSDIKEIFIKISE--QDISLPRVLKEARM 346

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             ST+EA R +K  A+KI      + K ++ L        +    GK+  +   +
Sbjct: 347 VPSTSEALRLIKQGAVKIEGKKTLDPKHKLSL-----NSCLLYQVGKRRFLKIKI 396


>gi|16752679|ref|NP_444946.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|14195230|sp|Q9Z8I2|SYY_CHLPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7189321|gb|AAF38242.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
          Length = 412

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 139/422 (32%), Positives = 217/422 (51%), Gaps = 21/422 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
              +L  L ER  +   +    L+ +  +G + AY+G+D TA +LH GH   +  L  L 
Sbjct: 1   MQSWLQSLQERNILENFT--AGLESV--EGPIAAYLGFDPTAPALHIGHWIGICFLKRLA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++          
Sbjct: 57  ALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYLP------GVT 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+YDF
Sbjct: 111 LVNNADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT SG 
Sbjct: 171 YHLFKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +A 
Sbjct: 231 VWLDSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQ 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SISKDEVSRGMGLLT 354
           +I + +HG    E+A +        ++ S                S+ K EV  G   L 
Sbjct: 291 DILSAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGASLDKSEV-LGKRWLD 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  ++ 
Sbjct: 350 LFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKLVL 409

Query: 415 HL 416
           +L
Sbjct: 410 YL 411


>gi|297182117|gb|ADI18290.1| tyrosyl-tRNA synthetase [uncultured Chromatiales bacterium
           HF0200_41F04]
          Length = 398

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 99/415 (23%), Positives = 184/415 (44%), Gaps = 23/415 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             D L I+  RG    +     L+ L  +  +    G+D TA  LH GH   +  +   Q
Sbjct: 1   MQDQLDIIR-RGVTEILVEEELLEKLQLKRPLRVKAGFDPTAPDLHLGHTVLINKMRQFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I L+G  T +IGDP+ ++ +R  +  +E++ N +         +          
Sbjct: 60  DIGHEIIFLIGDFTGMIGDPTGKNATRPPLTPKEVKANAQTYTEQVFKILDPV----KTK 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++ N  W+  +     L  I S  +V RML  +  + R    Q ++  EF Y ++Q YD 
Sbjct: 116 VVFNSQWM-GVMDPADLVGIASKHTVARMLERDDFQKRYAAGQPIAIHEFLYPLIQGYDS 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSG 243
           V L    +  +++GG+DQ  N++ G  L +         LT PLL   + G KM K+L+ 
Sbjct: 175 VAL----EADIELGGTDQKFNLLVGRQLQQAYGQAPQVVLTMPLLEGISGGDKMSKSLNN 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKI 301
            I + +  +  +       +I D  +  + + +++  +  I+++        N  E K  
Sbjct: 231 YIGITEPASEMF---GKLMSISDDLMWKYFELVSSRSLRHIEKLRADTRAGRNPKEVKVE 287

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    HG   A  A  A  + +        MP ++++    + G+ L  ++  AG 
Sbjct: 288 LAVEIVGRFHGTASANMAFQAFDQRYVRGQLPDDMPEVTVAVG--TEGLPLANVLKVAGL 345

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +ST+E+RR ++  A++I+ + I + + +IK+        + +  GK+      L
Sbjct: 346 TSSTSESRRMVEQGAVRIDGAKIDDARQRIKV-----GRPLVIQVGKRRIARVLL 395


>gi|28198068|ref|NP_778382.1| tyrosyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182680696|ref|YP_001828856.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|81439188|sp|Q87F06|SYY_XYLFT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28056128|gb|AAO28031.1| tyrosyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182630806|gb|ACB91582.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579161|gb|ADN63130.1| tyrosyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 418

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 168/411 (40%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG    +        L S   +    G+D T+  LH GH   L  +   Q  GH+ +
Sbjct: 10  LIERGANEILKFDELERRLRSGRPLRIKAGFDPTSPDLHLGHTVLLNKMRQFQDLGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ ++ +R+ +  +++  N    +      +     +T   +  N  W
Sbjct: 70  FLIGDFTGMIGDPTGKNVTRKPLSREDVLANASTYEDQVFKVLD----RTLTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D+++      +V RML  +    R   +Q +   EF Y ++Q YD + L    
Sbjct: 126 FEKMSAVDMIKLAAQH-TVARMLERDDFAKRFASQQPIVIHEFLYPLIQGYDSIALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E    P    LT PLL       KM K+L   I + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRALQEHHGQPPQIVLTMPLLEGLDGVAKMSKSLGNYIGIKEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATEI 306
              P +       I D  +  + + L+    +                  E K  +A E+
Sbjct: 241 ---PIDIVTKTMKIGDDLMWRWIELLSFKISAAEAVALREAVAKSELNPREVKLRLAHEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  +    AEKA            ++  +P   I+    + G+ L+ L+ K+G A S +
Sbjct: 298 VSRFYDNAAAEKAIAGWQAVVTGQGNNNLLPLQKINVP--ADGVRLVALLTKSGLAPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++++  ++ +  L      F       +  GK+N I   L 
Sbjct: 356 EAMRKLKERAVRVDGIVVDDAHL-----HFVPGFEGLIQIGKRNFIKVRLV 401


>gi|260771187|ref|ZP_05880114.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613784|gb|EEX38976.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315179207|gb|ADT86121.1| tyrosyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 395

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSQLGA-EGMIRLAANQTVARMLERDDFKKRYANGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEELQQFKDDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEM-----PEFEFEAGIAIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K +   + + KL          G      GK+      +
Sbjct: 342 EAGLVGSTSDAMRMIKQGAVKQDGEKLDDAKLVPAA------GTAVYQVGKRKFARVTV 394


>gi|86141675|ref|ZP_01060199.1| tyrosyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831238|gb|EAQ49694.1| tyrosyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 378

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 133/380 (35%), Positives = 204/380 (53%), Gaps = 22/380 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++F+  L  RG IH +    E      + + +AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MITNFVEELQWRGMIHDVMPGTE--EHLMEQMRSAYVGIDPTADSLHIGHLVGVMMLKHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q +GH+PI+L+GG T +IGDPS + + R ++    ++ N E IK   S F+ + +  +  
Sbjct: 59  QASGHRPIALVGGATGMIGDPSGKSDERNLLDEDTLRHNQEAIKEQLSRFLDFDSDEENA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A+++NN  W+    +++ +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q
Sbjct: 119 AVLVNNYDWMKDFSFLEFIRDVGKHITVNYMMAKDSVKKRLSAESAEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +A+T PL+T A GTK GKT
Sbjct: 179 GYDFLHLYREKELTLQMGGSDQWGNITTGTELVRRIGGGKAYAMTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G IWL+ E TSPY F+QYW N  D D   + K  T L   EI+       +       
Sbjct: 239 AGGNIWLDAERTSPYRFYQYWLNTSDEDAAKYIKIFTFLGKEEIENLIAEHQEAPHQRAL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTISISKD 344
           +K +A E+T   HG E  E A  A+   F  S                   +P   +S+ 
Sbjct: 299 QKRLAEEVTISTHGVENYENAVKASEILFGKSTAANLKALNEKTFLDVFDGVPQAEVSRG 358

Query: 345 EVSRGMGLLTLIVK-AGFAT 363
           E+  G+ +++ + +  GF  
Sbjct: 359 EIEAGLDMVSALAEKTGFLK 378


>gi|157834045|pdb|1TYC|A Chain A, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 191/320 (59%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAPILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   +
Sbjct: 300 EEVTKLVHGEEALRQAIRIS 319


>gi|195953012|ref|YP_002121302.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932624|gb|ACG57324.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 392

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 179/406 (44%), Gaps = 24/406 (5%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + ++G +  I     ++ L     +    G+D TA  LH GH   L  L   Q  GH+ 
Sbjct: 8   EIIQKGTVEIIEKEELIEKLKKGKPLVVKAGFDPTAKDLHLGHTVLLQKLRDFQNLGHEI 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDP+ R+E+R  +  +E+ EN +  +      +          +L N  
Sbjct: 68  IFLIGDFTAMIGDPTGRNETRPPLSKEEVLENAKTYQEQVFKILDKD----KTKILYNSE 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL S      +  + S ++V RML  +  + R K    +   EF Y + Q YD V L   
Sbjct: 124 WL-STMTTKDIVNLASKYTVARMLERDDFQKRYKEGSPIHIHEFLYPLFQGYDSVILK-- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GGSDQ  N++ G +L +     K   +T PLL       KM K+    I L  
Sbjct: 181 --ADIEIGGSDQKFNLLVGRELQKDYGLEKQVCITMPLLVGIDGVKKMSKSYGNYIALK- 237

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
               P + +    +I D  +  +   LT     EI+++  +      EAKK +A  I + 
Sbjct: 238 --DDPKDMFGKIMSISDELMYDYYTLLTDKTPDEIEKIKAMHPM---EAKKQLAYIIVSR 292

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  E+A++A       F      +  P  S S  +    +    LIVK GFATS NEAR
Sbjct: 293 FHSEEKAKEAKEFFESTFSQKEFPKDAPVFSFSDKD---SLKAYELIVKIGFATSNNEAR 349

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +    ++IN   I++   +I ++       +++  GKK+  I  
Sbjct: 350 RIISGGGLRINGEKITDPNKEIVVE-----NELRVQVGKKHFAIIK 390


>gi|310642771|ref|YP_003947529.1| tyrosyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309247721|gb|ADO57288.1| Tyrosyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 417

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 178/416 (42%), Gaps = 28/416 (6%)

Query: 11  ILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +  RG + +I    EL         S   +   +G D +A  +H GH   +  L   Q+
Sbjct: 19  EVIRRG-VAEIVPEDELKRKVVKSVVSGEPLKIKLGLDPSAPDIHIGHTVVMHKLRQFQE 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   ++G  T  IGDP+ + E+R+ +  +++Q N +  K      +          +
Sbjct: 78  LGHQVQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAQTYKEQIFKILDP----EKTKV 133

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  + + D++  + +  +V RML  +    R +    +S  EF Y ++Q  D V
Sbjct: 134 YYNSEWLGPMSFADVVT-LSAKVTVARMLERDDFTKRYQNGLPISIHEFFYPLMQGMDSV 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
            L       +++GG+DQ  N++ G  L +         +T PLL       KM K+L   
Sbjct: 193 ALQ----SDIELGGTDQKFNLLMGRTLQKEYGVEPQATITLPLLEGLDGVQKMSKSLGNY 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKI 301
           I +++    P   +    ++ D  ++ + +  T +   E+  +AK   +      +AK  
Sbjct: 249 IGVDE---EPNEIYGKSMSVPDELMLKYFELATDITNEELAELAKGVKEGSVHPRDAKMK 305

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAG 360
           +A  +  M HG E AE A    +  F        +   +++ D++   G+ ++ L+   G
Sbjct: 306 LAGTLVRMYHGEEAAEAAKQHFVTVFQQRALPDDIEEFTLTADQLEEGGIRVIQLLTHLG 365

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           FA S  EA+R ++  ++KIN    ++     K Q+ D      +  GK+      L
Sbjct: 366 FAASNGEAKRSIQQGSVKINEEKWTDVNEAYKPQEGD-----IVQVGKRKFAKIKL 416


>gi|71275876|ref|ZP_00652159.1| Tyrosyl-tRNA synthetase, class Ib [Xylella fastidiosa Dixon]
 gi|170729376|ref|YP_001774809.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71163253|gb|EAO12972.1| Tyrosyl-tRNA synthetase, class Ib [Xylella fastidiosa Dixon]
 gi|167964169|gb|ACA11179.1| Tyrosine--tRNA ligase [Xylella fastidiosa M12]
          Length = 418

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 95/411 (23%), Positives = 167/411 (40%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG    +        L S   +    G+D T+  LH GH   L  +   Q  GH+ +
Sbjct: 10  LIERGANEILKFDELERRLRSGRPLRIKAGFDPTSPDLHLGHTVLLNKMRQFQDLGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ ++ +R+ +  +++  N    +      +     +T   +  N  W
Sbjct: 70  FLIGDFTGMIGDPTGKNVTRKPLSREDVLANASTYEDQVFKVLD----RTLTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D+++      +V RML  +    R   +  +   EF Y ++Q YD + L    
Sbjct: 126 FGKMSAVDMIKLAAQH-TVARMLERDDFAKRFASQHPIVIHEFLYPLIQGYDSIALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E    P    LT PLL       KM K+L   I + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRALQEHHGQPPQIVLTMPLLEGLDGVAKMSKSLGNYIGIKEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATEI 306
              P +       I D  +  + + L+    +                  E K  +A E+
Sbjct: 241 ---PIDIVTKTMKIGDDLMWRWIELLSFKISAAEAVALREAVAKSELNPREVKLRLAHEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  +    AEKA            ++  +P   I+    + G+ L+ L+ K+G A S +
Sbjct: 298 VSRFYDNAAAEKAIAGWQAVVTGQGNNNLLPLQKINVP--ADGVRLVALLTKSGLAPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++++  ++ +  L      F       +  GK+N I   L 
Sbjct: 356 EAMRKLKERAVRVDGIVVDDAHL-----HFVPGFEGLIQIGKRNFIKVRLV 401


>gi|258544577|ref|ZP_05704811.1| tyrosine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520208|gb|EEV89067.1| tyrosine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 418

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 89/416 (21%), Positives = 168/416 (40%), Gaps = 25/416 (6%)

Query: 8   FLSI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            L     L  RG +  I        L +   +   +G D TA  LH GH   L  L   Q
Sbjct: 22  VLDEQLALFRRGAVDFIGEEELRAKLAAGKKLRVKLGMDPTAPDLHFGHTVVLNKLRQFQ 81

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ + L+G  T++IGDPS +  +R  +  +++  N E  K      +          
Sbjct: 82  DAGHQVLFLIGDFTALIGDPSGKSATRPPLSPEQVLANAETYKEQVFKILDPA----KTE 137

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++ N  W+  +   D++  + + ++V R+L  +  + R    + ++  EF Y + Q YD 
Sbjct: 138 VMFNSHWMGPMSSTDMI-RLAAKYTVARILERDDFQKRYTEGRPIALHEFLYPLTQGYDS 196

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSG 243
           V +    +  +++GG+DQ  N++ G DL           +T P+L       KM K+L  
Sbjct: 197 VAM----EADVELGGTDQKFNLLVGRDLQREYGQSPQAIITMPILEGLDGVQKMSKSLGN 252

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            I +          +    +I D  +  +   L+   M EI   +     G+   + K  
Sbjct: 253 YIGIF---DPANEMFGKIMSISDELMWRWFTLLSFRSMDEIAALQAEVTAGRNPRDVKFE 309

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E+    H    A  A  A +  F  +   + +    I   + + G  +  ++  AG 
Sbjct: 310 LARELVARFHDEAAAAAAQEAFVNRFAKNEIPEDLEEFRIDAPDGALG--IAHVLKAAGL 367

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+E  R +   A+K++   +++   +++        +  +  GK+  +   L 
Sbjct: 368 VGSTSEGLRMVDGGAVKVDGERVASRDFKLER-----GFSGIVQAGKRRIVKVVLV 418


>gi|309775624|ref|ZP_07670624.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916718|gb|EFP62458.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 405

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 133/408 (32%), Positives = 207/408 (50%), Gaps = 20/408 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I+ +++   L+   + G +T YIG D T  SLH GH + L+    L++ G
Sbjct: 3   LFDELKYRGLINDVTSLE-LEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEHG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T  IGDP      R M+  + ++ N + +         +         +N
Sbjct: 62  HHPIMLVGGATGFIGDPKA-SGERNMLTKEVLEHNYQCLSKQIEELFGFEM-------VN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I  ID LR+ G +F+V+ M++ E+V+ RL  +  +S+ EF+YMILQA DF+ L
Sbjct: 114 NLDWTKDISVIDFLRDYGKYFNVSYMINKETVKRRL--DAGISYTEFSYMILQALDFLHL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAI 245
            ++  C LQ+GG DQWGNI  G++L  +    ++  + LT PL+T A GTK GK+ SG +
Sbjct: 172 YEDKGCTLQLGGQDQWGNITSGLELIRKKHGAEVECYGLTMPLITKADGTKFGKSESGTV 231

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+K+ TS Y  +Q+  N +D  V+ + K+LT L   EID             EA+K +A
Sbjct: 232 WLDKKKTSAYEMYQFLVNSEDEKVIDYLKKLTFLSKEEIDALEEKVKTEPHFREAQKTLA 291

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVK 358
            E+ T +HG EE  KA       F  +I       +          ++   + L   +V+
Sbjct: 292 KEVVTFLHGEEEYNKALKITNALFKGNIRDLDAGELHDALKGFEAAKIDDALTLTDTLVQ 351

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           AG A+S  EAR  +   +I++N   I + +  +   +  S G   +  
Sbjct: 352 AGIASSKREAREWINQGSIQVNGDKIKDVEFIVSSANAISEGRTLIKR 399


>gi|288818270|ref|YP_003432618.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787670|dbj|BAI69417.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751867|gb|ADO45350.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 393

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 107/404 (26%), Positives = 178/404 (44%), Gaps = 24/404 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ++G +  I     L  L     +    G+D TA  LH GH   L  +   Q+ GH+  
Sbjct: 9   LIKKGTVEIIEEEELLRKLKEGRPLKVKAGFDPTAPDLHLGHTVLLQKMRTFQQLGHEVY 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDP+ R E+R  +  +++ EN +  +      +          ++ N TW
Sbjct: 69  FVIGDFTAMIGDPTGRLETRPPLTREQVIENAKTYEHQVFKVLDP----EKTNIVFNSTW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L S    + + ++   ++V RML  +    R K    +   EF Y +LQ YD V L    
Sbjct: 125 L-STLGTEGVIKLAGKYTVARMLERDDFSKRFKEGIPIYIHEFLYPLLQGYDSVFLK--- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL           +T PLL       KM K+    I L ++
Sbjct: 181 -ADVELGGTDQKFNLLVGRDLQREAGLEPQVCITLPLLVGLDGVRKMSKSYGNYIGLTED 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              PY  +    +I D  +  +   LT     EI+R+ +L      EAKK +A  I +  
Sbjct: 240 ---PYTMFGKTMSISDQLMWEYYTLLTDYTQEEIERIKELHPM---EAKKRLAHYIVSRY 293

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H +EEA++A       F      +  P I + +    +      L+ + G  +S N ARR
Sbjct: 294 HSKEEADRALDNFERTFSKREFPEDAPVIKVERGLKRKAY---ELLYELGIESSKNSARR 350

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++   +KIN   I +E  +I++++      +KL  GKK     
Sbjct: 351 VIQGGGLKINFQKIEDENQEIEIKE-----ELKLQVGKKRFYRI 389


>gi|213018657|ref|ZP_03334465.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995608|gb|EEB56248.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 363

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 178/360 (49%), Positives = 250/360 (69%), Gaps = 1/360 (0%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L  LQK G+KPI L+GGGT+ IGDPS +D++R ++  ++I +NI  IK      I + 
Sbjct: 1   MMLRHLQKFGYKPIVLLGGGTTKIGDPSGKDKARSVLPIEDINQNILGIKKTLEKMISFD 60

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            GKT A+++NN  WL +IKYID LR+IG+ FSVNRML F+SV+ RL REQ+LSFLEFNYM
Sbjct: 61  YGKTGAIIVNNADWLDNIKYIDFLRDIGTHFSVNRMLGFDSVKIRLDREQNLSFLEFNYM 120

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDFVEL K Y CR Q+GGSDQWGNI+ GI+L ++L  P+LF LT+PLL  A G KM
Sbjct: 121 LLQAYDFVELNKKYGCRFQIGGSDQWGNIVNGIELSKKLNLPELFGLTTPLLLNAQGKKM 180

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GKT SGA+WL+  M + Y++WQY+RN+DD DV  F +  T LP+ EI ++  L+ +E NE
Sbjct: 181 GKTESGAVWLDGSMLNSYDYWQYFRNVDDQDVGRFLRLFTDLPIDEIKKLESLKDQETNE 240

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AKK++ATE+T + HG +EAE A +AA+  F+ +  S  +   +I+K++++ G+ L+ L+ 
Sbjct: 241 AKKVLATEVTKICHGCKEAELARSAAISAFE-NEDSSLLSGYTITKEQIANGIPLIDLLY 299

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             GF  S   A+R ++ N  K+N++ I++    I  + F     IKLS GKK HI   + 
Sbjct: 300 DTGFEPSKGAAKRLIQGNGCKVNDNTINDVNYTINSESFKGQPFIKLSAGKKRHIKILVS 359


>gi|239617872|ref|YP_002941194.1| tyrosyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506703|gb|ACR80190.1| tyrosyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 397

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 101/410 (24%), Positives = 175/410 (42%), Gaps = 26/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL  R  +  IS    ++ L     +   +G D +   LH GH   L  L   Q  GH
Sbjct: 8   LQILK-RNSVSLISEEELIERLKLGRPLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I ++G  T+ IGDPS R ++R M+  +E ++N           +          +  N
Sbjct: 67  HVILIIGDFTARIGDPSGRSKTRPMLSKEEAKQNAITYSQQAFKILDRD----KTEIKFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + + +  + + ++V RML       R K  + +S  EF Y + QAYD V + 
Sbjct: 123 SEWLDGMSF-EDVIRLSAKYTVARMLERNDFEKRYKNNEPISIAEFLYPLAQAYDSVVVK 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG DQ+ N +    + E         LT PL+  T    KM K+    +  
Sbjct: 182 ----ADVEIGGDDQFFNFVVARKIQEEYGLQPQVILTMPLIEGTDGNLKMSKSYGNYVAF 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKKIIAT 304
                 P   +    +I D  ++ + + LT +P     + +R  K +     + K ++A 
Sbjct: 238 E---DPPEEMFGKLMSIPDTLIIKYMRLLTDIPEERILQYERDIKSRKINPRDVKMLLAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A +A    ++ F        +P I + + E+     L+ L+VK    +S
Sbjct: 295 EITRFFHGEEAAVRARENFIKVFRKKELPSEIPEIKVKESEL----SLVDLMVKYANISS 350

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EARR +    +++NN++I +   ++ + + D      L  GK+     
Sbjct: 351 KSEARRLISQGGVRLNNTVIKDIHAKVAVSNGD-----ILRIGKRRFFKI 395


>gi|231099|pdb|4TS1|A Chain A, Crystal Structure Of A Deletion Mutant Of A Tyrosyl-TRNA
           Synthetase Complexed With Tyrosine
 gi|231101|pdb|4TS1|B Chain B, Crystal Structure Of A Deletion Mutant Of A Tyrosyl-TRNA
           Synthetase Complexed With Tyrosine
          Length = 319

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 136/320 (42%), Positives = 191/320 (59%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   A
Sbjct: 300 EEVTKLVHGEEALRQAIRYA 319


>gi|146308941|ref|YP_001189406.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145577142|gb|ABP86674.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 399

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 170/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEEVLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +K  D +  + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MDQLKPADFI-RLASQYTVARMLERDDFDKRYTSNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQESQCIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
              P   +    ++ DA +  + + L+   M EI++  +   QG    + K  +A E+  
Sbjct: 241 ---PGVMYSKLVSMPDALMWRYFELLSFRSMEEIEQFKRDVQQGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P + +   E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMRDGELPEDLPEVELVSAE---DMPISSVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++       +   F          GK+      L
Sbjct: 355 RDLLGSGGVRVDGEVVD------RAFLFKVGATHVCQAGKRAFARITL 396


>gi|15835894|ref|NP_300418.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8978733|dbj|BAA98569.1| tyrosyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 422

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 138/424 (32%), Positives = 217/424 (51%), Gaps = 21/424 (4%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +    +L  L ER  +   +    L+ +  +G + AY+G+D TA +LH GH   +  L  
Sbjct: 9   SLMQSWLQSLQERNILENFT--AGLESV--EGPIAAYLGFDPTAPALHIGHWIGICFLKR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           L   G  PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++        
Sbjct: 65  LAALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYLP------G 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++NN  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+Y
Sbjct: 119 VTLVNNADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT S
Sbjct: 179 DFYHLFKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTES 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           G +WL+ ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +
Sbjct: 239 GTVWLDSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFV 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SISKDEVSRGMGL 352
           A +I + +HG    E+A +        ++ S                S+ K EV     L
Sbjct: 299 AQDILSAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGASLDKSEVLGKRWL 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +V  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  +
Sbjct: 359 GLFLV-LGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKL 417

Query: 413 ICHL 416
           + +L
Sbjct: 418 VLYL 421


>gi|118594131|ref|ZP_01551478.1| tyrosyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118439909|gb|EAV46536.1| tyrosyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 397

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 167/406 (41%), Gaps = 23/406 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG    +     ++ L     +    G+D TA  LH GH   L  L  LQ  GH  +
Sbjct: 9   IIKRGTDEILVEAELIEKLKENRPLRIKAGFDPTAPDLHLGHTVLLNKLRQLQDLGHHVM 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ ++ +R  +  +E+ EN +  +      +     K    ++ N  W
Sbjct: 69  FLIGDFTGMIGDPTGKNTTRPPLTKEEVSENAQSYEKQVFKILD----KNKTEVVFNSKW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +    +L       +V RML  +    R K  Q ++  EF Y +LQ YD V L    
Sbjct: 125 LEPLGAAGMLTLSARH-TVARMLERDDFSKRFKSNQPIAIHEFMYPLLQGYDSVALK--- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L ++        +T PLL       KM K+L+  I +++ 
Sbjct: 181 -ADIELGGTDQKFNLLMGRELQKQYDQTPQCIITMPLLEGLDGVNKMSKSLNNYIGVDEP 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITT 308
                  +    +I D  +  + + L+   ++EID   K      N    K   A EI  
Sbjct: 240 ---AETIFAKILSISDDLMWRYIELLSLKKIAEIDVWRKRFDLGENPKNIKVEFAKEIVA 296

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG + A+ A           I    +P I I     +  + +  L+    F  ST+EA
Sbjct: 297 RFHGEKLADSAEQDFNLRAQGKIP-DDIPEIKIQYP--NNKVTVPQLLKHIQFVGSTSEA 353

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            R +K   +K++   I +    I+     +     +  GK+     
Sbjct: 354 MRLIKGGGVKVDGEKIVDPHYLIE-----NMTTFTIQVGKRKFANI 394


>gi|148545721|ref|YP_001265823.1| tyrosyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148509779|gb|ABQ76639.1| tyrosyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 399

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 169/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MDKLTPADFI-RLASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EI++            + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEIEVAAAE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+K++ +++ ++        F          GKK+     L
Sbjct: 355 RDLLSGGAVKVDGAVV-DKDFM-----FVLGATHVCQAGKKSFGRVTL 396


>gi|57106869|ref|XP_543740.1| PREDICTED: similar to Probable tyrosyl-tRNA synthetase,
           mitochondrial precursor (Tyrosine--tRNA ligase) (TyrRS)
           [Canis familiaris]
          Length = 477

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 133/436 (30%), Positives = 209/436 (47%), Gaps = 28/436 (6%)

Query: 8   FLSILSERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLML 59
            L++   RG   +    +    EL  L  +G      T Y G+D TA SLH GHL  L+ 
Sbjct: 38  LLAVQKARGLFKEFFPEKGTKVELPELLDRGSGSFPQTVYCGFDPTADSLHVGHLLTLLG 97

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-------IFSS 112
           LF  Q+ GH  I+L+GG T+ +GDPS R + R  +  ++++ N   ++            
Sbjct: 98  LFHFQRAGHNVIALVGGATARLGDPSGRPKEREALAPEQVRGNARALRRGLEAVAANHQR 157

Query: 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
               G       +L+N  W      +D L  +G  F +  +LS  SV++RL+    +S  
Sbjct: 158 LFANGRPWGSFTVLDNAAWYQGQHLVDFLAAVGGHFRMGTLLSRASVQARLQSAGGMSLA 217

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI  G +   +L    +F +T PL+T+ 
Sbjct: 218 EFLYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNITSGYEFIHKLTGEDVFGITVPLVTST 277

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           +G K+GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L  
Sbjct: 278 TGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDNLVERYLKLFTFLPLPEIDHIMQLHD 337

Query: 293 --KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTIS 340
              E    +K +A E+T +VHG+E  + A       +  SI +  +             S
Sbjct: 338 KEPEKRGPQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAS 397

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDST 399
            S+  +  G  +L +  KA          R +    + IN+  ++N +  + + Q     
Sbjct: 398 FSELVLDPGTSVLDICRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKN 457

Query: 400 GNIKLSFGKKNHIICH 415
           G   L  GK+N  I  
Sbjct: 458 GLSLLKIGKRNFYIIK 473


>gi|189500737|ref|YP_001960207.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496178|gb|ACE04726.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 405

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 101/407 (24%), Positives = 171/407 (42%), Gaps = 25/407 (6%)

Query: 15  RGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           R  +  IS       L     ++  +   +G D +   LH GH   L  L   Q  GH+ 
Sbjct: 15  RNTVEVISEEELEQKLTRSFETRTPLKIKLGADPSRPDLHLGHSVVLQKLRDFQDLGHEA 74

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I ++G  T++IGDPS +  +R  + ++E +EN        S  +     +    +  N  
Sbjct: 75  ILIIGDFTAMIGDPSGKSTTRPQLTAEEAKENGRTYFDQASKILD----RKKTTIRYNAD 130

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + + D++  + S ++V RML  +    R +  + +S  EF Y + Q  D V L  +
Sbjct: 131 WLGQMTFNDVI-RLSSHYTVARMLERDDFEKRYRSREPISIHEFLYPLAQGMDSVHLRND 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G DL           +T PLL       KM K+L  AI  N 
Sbjct: 190 ----IELGGTDQKFNLLVGRDLQREYGIHPQVCITMPLLVGTFGQDKMSKSLGNAICFN- 244

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
              +P + +    +I D  + ++   L   P    +   ++  +   EAK+ +A EI  +
Sbjct: 245 --DTPEDIYGRVLSIPDDLIETYFTLLLPTPERSPESFREMVNESPREAKRTLAKEIVAL 302

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  + A KA       F        +   + S       + L+ L+V      S  EAR
Sbjct: 303 FHSGDLAVKAEDHFDRVFVHKKAPLEIKEFAFSAS----SIPLVDLLVALKAVNSKTEAR 358

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R +  NAI+IN++ IS+   ++ L          +  GK+      L
Sbjct: 359 RLISQNAIQINDTKISDINFEVTLDQESK----TIKAGKRKFFNVVL 401


>gi|242009572|ref|XP_002425557.1| tyrosyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212509436|gb|EEB12819.1| tyrosyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 463

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 137/438 (31%), Positives = 217/438 (49%), Gaps = 28/438 (6%)

Query: 7   DFLSILSERGFIHQISN---PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + L  L ERGF   +       E+  L +    T Y G+D TA SLH G+L  L+ L   
Sbjct: 27  NVLK-LHERGFYSDLFPYKTADEVLDLLNSADQTVYAGFDPTADSLHIGNLLVLINLLHW 85

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
           Q++GH+ I+L+GG T+ IGDPS +   R  M++  ++EN E     IK IF + ++Y   
Sbjct: 86  QRSGHQVIALIGGATAQIGDPSGKLSERDKMKAHLVEENTEKIENCIKNIFDNHLEYFCD 145

Query: 120 KTDALM-------LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           K +          +NN  W C++  ++ +  IG  F +  ML  +S+R+R+  ++ LSF 
Sbjct: 146 KGETHKNIQELQIVNNTDWYCNMSALNFINNIGRNFRLGPMLGKQSIRTRMSTDEGLSFS 205

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF+Y I QAYD++ L +NY+CR Q+GGSDQ GNI+ G DL ++     ++ LT PL+TT 
Sbjct: 206 EFSYQIFQAYDWLHLFQNYNCRFQVGGSDQLGNIVSGYDLIQKFHKVPVYGLTIPLITTE 265

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
            G K GKT   AIWL+KE TS +  +Q+   I D+DV       T   M +I  +     
Sbjct: 266 EGDKFGKTAGNAIWLSKEKTSAFQLYQFLIRIKDSDVQKLLMLFTFETMPKILEIMNEHW 325

Query: 293 --KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTIS 340
                  A+K++A  I  +VHG    ++A       ++ ++                  +
Sbjct: 326 KTPHKRIAQKVLAENIVKLVHGPAGLQQAENVTAALYENNLEHLKKLEPLDLQSVFEGAT 385

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDST 399
            ++  +  G  +L   VKAG   + ++A R + +    IN+  ++N +  I         
Sbjct: 386 FTELLLEPGTTILEAAVKAGCFKTKSDAVRIISAGGFYINHQKVNNGQEVISMPSHILPN 445

Query: 400 GNIKLSFGKKNHIICHLC 417
               +  GKKN+ I    
Sbjct: 446 NVSLMRVGKKNYTIVKWS 463


>gi|26987177|ref|NP_742602.1| tyrosyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81442300|sp|Q88QQ2|SYY_PSEPK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24981812|gb|AAN66066.1|AE016235_5 tyrosyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 399

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 170/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MDKLTPADFI-RLASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EI++            + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEIEVAAAE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S A+K++ +++ ++        F          GKK+     L
Sbjct: 355 RDLLNSGAVKVDGAVV-DKDFM-----FVLGATHVCQAGKKSFGRVTL 396


>gi|302038034|ref|YP_003798356.1| tyrosyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606098|emb|CBK42431.1| Tyrosyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 405

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/413 (24%), Positives = 174/413 (42%), Gaps = 31/413 (7%)

Query: 11  ILSERGFIHQISNPRE----LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  RG +  I+        +  L  Q  +    G+D TA  LH GH   +  L   Q  
Sbjct: 9   DLILRGIVEVINPNELESRLVRSLKEQRPLRVKAGFDPTAPDLHLGHTVLIHKLKHFQDL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T +IGDP+ R E+R  +  +++ EN +  +      +          + 
Sbjct: 69  GHQVIFLIGDFTGMIGDPTGRSETRVALSKEKVLENAKTYERQIFKILDPH----KTQVE 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W+ ++   D L E+ + ++V RML  E    R    + +S  EF Y ++Q YD V 
Sbjct: 125 FNSRWMSAMTA-DGLIELSAHYTVARMLEREDFHKRYTEGKPISIHEFMYPLIQGYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G DL           +T PLL  T    KM K+L   I
Sbjct: 184 LK----ADVELGGTDQKFNLLMGRDLQRDYGQDAQVVITMPLLEGTDGVRKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            L      P   +    +I DA +  + + LTT      + + +++     +AK+ +A  
Sbjct: 240 ALE---DKPDEMFGKVMSISDALMQRYYELLTT------EDLERVKTAHPMDAKQSLAEL 290

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-ISISKDEVSR----GMGLLTLIVKAG 360
           I    HG E   +A     + F            ++++  +V       +GL+ L+ + G
Sbjct: 291 IVARYHGVEAGREARAMFQQKFQSREFPDQPDARVTLTSSDVKDVVAPSIGLVDLVARTG 350

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S +EARR +    ++IN    ++    I      +   + +  G++   +
Sbjct: 351 LVPSKSEARRLIVQGGVEINEQKFTDANAAIP---LTAGKPLHMRVGRRKFAV 400


>gi|167031482|ref|YP_001666713.1| tyrosyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|166857970|gb|ABY96377.1| tyrosyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 399

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 172/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MDKLTPADFI-RLASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EI++      +G    + K  +A EI  
Sbjct: 241 ---PGVMYGKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVAKGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEIEVAASE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+K++ +++ ++        F          GKK+     L
Sbjct: 355 RDLLNGGAVKVDGAVV-DKDFM-----FVLGATHVCQAGKKSFGRVTL 396


>gi|255310864|ref|ZP_05353434.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317164|ref|ZP_05358410.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255348425|ref|ZP_05380432.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255502967|ref|ZP_05381357.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|296435579|gb|ADH17753.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296436503|gb|ADH18673.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437439|gb|ADH19600.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297139938|gb|ADH96696.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 412

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 134/422 (31%), Positives = 214/422 (50%), Gaps = 21/422 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L 
Sbjct: 1   MQQLIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLRRLA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          
Sbjct: 57  AYGITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAATLASYLP------GIR 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF
Sbjct: 111 IVNNADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG 
Sbjct: 171 AHLFKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA 
Sbjct: 231 IWLDPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPT----------ISISKDEVSRGMGLLT 354
            I   VHG E   +A  A    F     S               + +++ ++  G   L 
Sbjct: 291 VIVKDVHGSEGLAQAQAATESFFASKGKSITEAELVALVESGVGVKVARADLI-GKRWLD 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V+ GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   + 
Sbjct: 350 IVVELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVI 409

Query: 415 HL 416
            L
Sbjct: 410 DL 411


>gi|294636385|ref|ZP_06714772.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090343|gb|EFE22904.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 281

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 119/274 (43%), Positives = 169/274 (61%), Gaps = 1/274 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  +EKI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKASERKLNTEETVQGWVEKIRHQVAPFLDFDCGANSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRLNQQQVWGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +WL+ + TSPY F+Q+W N  DADV  F K  T 
Sbjct: 248 VWLDPKKTSPYKFYQFWINTSDADVYRFLKFFTF 281


>gi|327399025|ref|YP_004339894.1| Tyrosyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181654|gb|AEA33835.1| Tyrosyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 406

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 102/413 (24%), Positives = 190/413 (46%), Gaps = 30/413 (7%)

Query: 13  SERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +RG   +I +  EL             +    G+D TA  LH GH   +  L   Q  G
Sbjct: 14  IKRGT-AEIIDKEELKDKLRDSIKMGKPLKIKAGFDPTAPDLHLGHTVLIQKLKQFQDLG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+   L+G  T +IGDP+ + E+R+ +  +E+++N +  K      +          ++ 
Sbjct: 73  HEVYFLIGDFTGMIGDPTGKSETRKALSKEEVEKNAQTYKDQIFKILDKD----KTKVVY 128

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  +D+++   +  +V RML  +    R    + +S  EF Y +LQ YD V L
Sbjct: 129 NSQWCSKLNAVDMIKLASTM-TVARMLERDDFSKRFSSNKPISIHEFLYPLLQGYDSVAL 187

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  +++GG+DQ  N++ G  L +         +  P+L       KM K+L   + 
Sbjct: 188 ----EADVELGGTDQKFNLLVGRHLQKLQGQRPQTVIMMPILEGLDGVQKMSKSLGNYVG 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIA 303
           +      P + +    +I D  +  + + L+   +SEI++M +          +AK+++A
Sbjct: 244 IT---DEPNDMYGKIMSISDELMWRYYELLSDRDLSEINQMKENVETGKLHPKKAKEMLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   HG E+A++AA    E F        +  I++  ++    + +  L+   GF  
Sbjct: 301 FEITKRFHGEEKAKEAAKFFEEMFKKKEIPDEIEEIALQLED--DEVWICHLLKNIGFVK 358

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S++EARR +KSNA+ I+++ ++++ L++K       G+  +  GK+      L
Sbjct: 359 SSSEARRMIKSNAVSIDSNKVTDDSLKLKK------GSYIVKVGKRKIAKVSL 405


>gi|194364078|ref|YP_002026688.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194346882|gb|ACF50005.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 403

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 95/422 (22%), Positives = 163/422 (38%), Gaps = 26/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +      L  RG    +        L     +    G+D TA  LH GH   L  +
Sbjct: 1   MSSIEEAL--ALIGRGADEILKLEDLRARLQEGRPLRIKAGFDPTAPDLHLGHTVLLNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T +IGDPS +  +R+ +   ++  N    +      +     +
Sbjct: 59  RQFQDLGHQVIFLIGDFTGMIGDPSGKSLTRKPLSKDDVLANARTYEEQVFKVLD----R 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   +  N  W   +   D++R  G   +V RML  +    R   +QS++  EF Y ++Q
Sbjct: 115 SRTEVRFNSEWFGKMGAADMIRLAGQH-TVARMLERDDFAKRYAAQQSIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G  L E         LT PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRGLQEHHGQKPQVVLTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEI 295
           +L   I +++      +       +DD  +  + + L+                  G   
Sbjct: 230 SLGNYIGISEP---AIDIVTKTMKVDDTLMWRWIELLSFDISQAEAVQLREQVANGGLNP 286

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
              K  +A E+ T  H    AE+A                +P   ++    + G+ +  L
Sbjct: 287 RVVKLRLARELATRFHDAAAAEQAVAGWEAAVTGQGDITQLPLQDVAIP--AEGLRIAAL 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  AG   S +EA R LK  A+K++  ++ + +  ++           L  GK+      
Sbjct: 345 LTAAGLTPSNSEANRKLKERAVKVDGEVVEDGQQVLQP-----GFEGLLQVGKRTFARVR 399

Query: 416 LC 417
           L 
Sbjct: 400 LV 401


>gi|307213308|gb|EFN88760.1| Probable tyrosyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 462

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 26/435 (5%)

Query: 6   SDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            + L  L ERG    I    +  E+  L ++     Y G+D TA SLH G+L  LM L  
Sbjct: 27  KNILK-LHERGMYENIFPNISTNEIVELLNKSPQCVYAGFDPTADSLHIGNLLILMNLLH 85

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-- 120
            Q+ GH+ I+L+GG T +IGDPS R   R  +    I+EN++ I     +          
Sbjct: 86  WQRAGHQVIALVGGATGLIGDPSHRKSERIEIEKCLIEENVKSIMKNIETIFTNHENYFW 145

Query: 121 -------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                     +++NN  W   +  I+ +R IG +  +  ML   SV++RL  +  +SF E
Sbjct: 146 KYKQESLRPLIIVNNLNWYTDVNVIEFVRNIGKYLRMGTMLGRASVQTRLNSDTGMSFTE 205

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F Y + QAYD+++L   Y+C  Q+GGSDQ GNI+ G DL  +    +++ +T PL+T   
Sbjct: 206 FTYQVFQAYDWLQLMIKYNCCFQIGGSDQMGNIMSGYDLIAKSTRKQVYGITIPLITAEG 265

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQ 291
           G K GK+L  AIWL+   +S +  +QY+    D+DV    K  T L + +I+      ++
Sbjct: 266 GKKFGKSLMNAIWLSSMKSSSFQLYQYFIRTKDSDVKKLFKLFTFLSLDKINEIVDEHMK 325

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISI 341
             E   A+KI+A ++T +VHG E    A  A+   +D SI                  +I
Sbjct: 326 NPEQRIAQKILAQQVTLLVHGEEGLFAAKRASAVLYDQSIEILVKMNASELADVFEAATI 385

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTG 400
                  G+ +  L +KA    S ++A+R + +    IN+  I+N    I       S  
Sbjct: 386 VDVLSEPGLTVYNLAIKAKCFKSNDDAQRIITAGGFYINHKKITNLNEAIVPGIHILSNN 445

Query: 401 NIKLSFGKKNHIICH 415
              L  GKK + I  
Sbjct: 446 ISLLRVGKKTYYIVR 460


>gi|220903632|ref|YP_002478944.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867931|gb|ACL48266.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 398

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 165/419 (39%), Gaps = 27/419 (6%)

Query: 5   KSDFLSIL--SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +D    +   +RG    I        +     +   +G+D TA  LH GH   +  +  
Sbjct: 1   MTDIDRQMATIKRGVAELIDENELRKKILRGAPLRIKVGFDPTAPDLHLGHTVVMHKMRH 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH  + L+G  T  IGDPS R E+R  +  +++  N E  K      +        
Sbjct: 61  FQELGHHVVFLIGDFTGRIGDPSGRSETRPPLTEEQVLANAETYKKQVFKILDPA----K 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  WL  +     ++   S+ +V RM+  +    R + ++ +S  EF Y + Q Y
Sbjct: 117 TEVAFNSAWLGKLDATGFIKLASSY-TVARMMERDDFEKRFREQRPISIHEFLYPLCQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTL 241
           D V L       ++MGG+DQ  N++ G +L           LT PLL  T    KM K+ 
Sbjct: 176 DSVCLK----TDVEMGGTDQKFNLLVGRNLQAHYGIESQCILTMPLLEGTDGVRKMSKSY 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEA 298
              I +++    P   +     I D  +  + + L+T  + +I  +             A
Sbjct: 232 GNYIGIDEA---PSEIFGKIMAISDDLMWRYYELLSTKSLEDIATLKTDVATGTVHPKAA 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A E+ +  H R++A++A       F        MP    +  E S     L     
Sbjct: 289 KETLAHEMVSRYHSRKDADEAQQGFNAVFADGGVPDEMPEHQCAHGEDSTPPVFLEA--- 345

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           AG   S  EA+R +K  A+ I+     +    I      S G   +  GKK  +   + 
Sbjct: 346 AGLVKSRGEAKRLMKEGALSIDGQRCDDA---ITP---LSAGEYVIKLGKKRFLKLLVS 398


>gi|149019700|gb|EDL77848.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 478

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 130/431 (30%), Positives = 205/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNP--------RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG   +               D   +    T Y G+D T  SLH GHL  L+ LF  Q
Sbjct: 44  RARGLFKEFFPESGTKTELPELFDRRRAGSPQTVYCGFDPTGDSLHVGHLLTLLGLFHFQ 103

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------G 117
           + GH  I+L+GG T+++GDPS R + R  + ++ ++ N   ++    +           G
Sbjct: 104 RAGHNVIALVGGSTALLGDPSGRTKEREALSAECVRANARALQRGLETLAANHARLFADG 163

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y 
Sbjct: 164 RPWGTFTVLDNAAWFQKQHLMDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFYQ 223

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 224 VLQAYDFYYLFRHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKL 283

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L     E 
Sbjct: 284 GKSAGNAVWLNREKTSPFELYQFFIRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPEK 343

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
             A+K +A E+T +VHG+E  + A       +  SI +  +             S S+  
Sbjct: 344 RIAQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIEALEVMSDQELKELFKEASFSELV 403

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKL 404
           +  G  ++    KA          R +    + IN+  ++N +  + + Q     G   L
Sbjct: 404 LDPGTSVIDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVIGQHILKNGLSLL 463

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 464 KIGKRNFYIIK 474


>gi|57528201|ref|NP_001009627.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|81883008|sp|Q5I0L3|SYYM_RAT RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|56972089|gb|AAH88224.1| Tyrosyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 471

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 130/431 (30%), Positives = 205/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNP--------RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG   +               D   +    T Y G+D T  SLH GHL  L+ LF  Q
Sbjct: 37  RARGLFKEFFPESGTKTELPELFDRRRAGSPQTVYCGFDPTGDSLHVGHLLTLLGLFHFQ 96

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------G 117
           + GH  I+L+GG T+++GDPS R + R  + ++ ++ N   ++    +           G
Sbjct: 97  RAGHNVIALVGGSTALLGDPSGRTKEREALSAECVRANARALQRGLETLAANHARLFADG 156

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y 
Sbjct: 157 RPWGTFTVLDNAAWFQKQHLMDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFYQ 216

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 217 VLQAYDFYYLFRHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKL 276

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L     E 
Sbjct: 277 GKSAGNAVWLNREKTSPFELYQFFIRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPEK 336

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
             A+K +A E+T +VHG+E  + A       +  SI +  +             S S+  
Sbjct: 337 RIAQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIEALEVMSDQELKELFKEASFSELV 396

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKL 404
           +  G  ++    KA          R +    + IN+  ++N +  + + Q     G   L
Sbjct: 397 LDPGTSVIDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVIGQHILKNGLSLL 456

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 457 KIGKRNFYIIK 467


>gi|330963950|gb|EGH64210.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 399

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 102/409 (24%), Positives = 169/409 (41%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
              P   +    +I D+ +  + + L+   M EI+  R     G    + K  +A E+  
Sbjct: 241 ---PGIMYGKLVSIPDSLMWRYFELLSFRSMEEINGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAATAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +    +KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFIVKL-----GATHVCQAGKKAFGRITLV 397


>gi|197294590|ref|YP_001799131.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|254783622|sp|B1VAA7|SYY_PHYAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|171853917|emb|CAM11880.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 415

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 137/420 (32%), Positives = 209/420 (49%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F   L  R  I   S+ +EL  L     +  Y G+D T+ SL  GHL QL ++  L+K 
Sbjct: 2   SFYEELKWRNLIKDSSDEKELKNLLDCKKIKFYCGFDPTSDSLTVGHLVQLTMMSLLEKQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T +IGDP    E R+++  +   +N + ++      +     +     L
Sbjct: 62  GHSPFILVGGATGLIGDPKE-TEERKLLSLETSLQNAKSLETQLKKILF----QKKITFL 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I  LR+ G  F++N ML+ ++V  RL     +SF EF YMILQ+ DF  
Sbjct: 117 NNYEWFSQLDIITFLRKYGKLFNINYMLNKQTVAKRL--SSGISFTEFTYMILQSLDFHH 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L KNY  +LQ+GGSDQWGNI  G++L  +   T   F L++PLL  A+GTK GK+    +
Sbjct: 175 LYKNYGVQLQLGGSDQWGNITSGLELIRKLETTSHAFGLSTPLLLNANGTKFGKSEQDVL 234

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ + TSPY  +QY+ N+ D +VV+  K+LT +P  EI  + K   Q  +   A+K +A
Sbjct: 235 WLDPQKTSPYKIYQYFLNLADEEVVNCLKQLTLIPKEEILELEKATLQTPQKRLAQKALA 294

Query: 304 TEITTMVHGREEAEKAATAAM--ECFDMSIHSQHMPTISISKDEVSRGMGLL-----TLI 356
             I  +++ ++  ++                 Q      ++K   S    L+       +
Sbjct: 295 NNIVNLIYSQKVLQECHKTNEVLFLNKKKESFQEADFTLLNKTLFSYETSLVSIPLSEAL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           VK    TS  EAR  ++  +I+I N  I N    I  ++      + L  GKKN+ +  L
Sbjct: 355 VKTQLTTSKREAREFIQRGSIQIFNEKIKNPDYLIDKKNTLFNKYVLLKKGKKNNSLIIL 414


>gi|284098530|ref|ZP_06385916.1| Tyrosyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830468|gb|EFC34659.1| Tyrosyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 407

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 181/417 (43%), Gaps = 33/417 (7%)

Query: 11  ILSERGFIHQISNPRELDI-----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  RG +  +   REL+      L     +    G+D TA  LH GH+  +  L   Q+
Sbjct: 11  DLITRGTV-DVIQERELEDRVRASLKEGSPLRVKAGFDPTAPDLHLGHIVLIQKLRHFQE 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+G  T +IGDP+   E+R+++  +++  N +  +      +          +
Sbjct: 70  LGHEAIFLIGDFTGMIGDPTGVSETRKVLSKEQVLANAKTYERQIFKTLDP----EKTRV 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  W+  ++  D++  + S +++ RML  +    R + ++ +   EF Y ++Q YD V
Sbjct: 126 EFNSRWMRDMRAQDIVE-LCSHYNLARMLERDDFSKRYREQKPIGVHEFLYPLVQGYDSV 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGA 244
            L    +  +++GG+DQ  N++ G DL           +T PLL  T    KM K+   A
Sbjct: 185 AL----EADVELGGTDQTFNLLVGRDLQRDWGQVPQIVITMPLLEGTDGVRKMSKSFGNA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           I L      P + +    +I D  +  + + LT+  +  + +          EAK  +A 
Sbjct: 241 IALE---DEPSDMFGKIMSISDDLMFRYYELLTSEDLDAVKQR------HPKEAKLDLAG 291

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMP-TISISKDEVSRG----MGLLTLIVKA 359
            + T  HG +   +A     + F      +    T++++  + S      +GL+ L+++ 
Sbjct: 292 AMVTRYHGADAGRQAKEDFEQKFRKREFPEQPDVTVTLTAADFSDPNNPSIGLVDLLMRT 351

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G   S  EARR +   A+ +N     +    +      S  + ++  GK+ + +  +
Sbjct: 352 GLLPSKGEARRLIAQGAVVVNEERCQDSTAVLP---LQSNESYQMKIGKRKYALVQV 405


>gi|325924893|ref|ZP_08186325.1| tyrosyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325544680|gb|EGD16031.1| tyrosyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 403

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/411 (23%), Positives = 159/411 (38%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L +   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEVLKLDQLQARLATGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILD----RERTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++      +V RML  +    R   +Q ++  EF Y ++Q YD V L    
Sbjct: 126 FGQMSAADMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I +N+ 
Sbjct: 182 -ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEINEAKKIIATEI 306
                +       I D     +   L+        + +            E K  +A E+
Sbjct: 241 ---AIDIVTKTMKIGDELTWRWIDLLSFDISLAEAARLKEQVAAGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +   +   G+ L  L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVPD--EGLRLAGLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVKIDGEVVEDPSRV-----FTHGFEGVIQVGKRNFARVLLV 401


>gi|307297746|ref|ZP_07577552.1| tyrosyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917006|gb|EFN47388.1| tyrosyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 397

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 104/410 (25%), Positives = 176/410 (42%), Gaps = 26/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  LS R  +  IS    L  L S+  +   +G D +   LH GH   L  L   QK GH
Sbjct: 7   LKELS-RNHVSLISEEELLRKLKSKRSLRVKLGVDPSRPDLHLGHAVVLRKLRHFQKFGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + + ++G  T+ IGDPS R ++R M+  +E + N E         +     +    +  N
Sbjct: 66  QVVLIIGDFTARIGDPSGRSKTRPMLSREEAKINAESYSTQAFKILD----RELTEIRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL      + +  + S ++V RM+       R +  + +   EF Y + QAYD V + 
Sbjct: 122 SEWL-DAMSFEDVIRLSSKYTVARMMERHDFARRYEENEPIGISEFLYPLAQAYDSVVVK 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG DQ+ N++ G  + E         LT PL+  T    KM K+    I  
Sbjct: 181 ----ADVEIGGDDQFFNLVVGRKIQEEHGLEAQAILTVPLIEGTDGKLKMSKSYDNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKEINEAKKIIAT 304
           +    +P + +    +I D   + + + LT       SEI+   K +     + K  +  
Sbjct: 237 D---DTPRDMFGKLMSIPDTLTLKYFRLLTDKSEVELSEIETKIKSKSVNPRDLKLELGV 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT+  +G E A  A    ++ F        +P I IS    +  + ++ L+V     +S
Sbjct: 294 EITSQFYGEETALNARDEFIKIFRNKELPGEIPEIKIS----TESVSVVDLLVSHANISS 349

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EARR +    +K+N+ ++++    I++ D D      L  GKK     
Sbjct: 350 RSEARRLIDQGGVKVNDEVLNDIHSVIEISDGD-----VLRIGKKRFYRL 394


>gi|295698352|ref|YP_003603007.1| tyrosyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157035|gb|ADD79480.1| tyrosyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 427

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 138/426 (32%), Positives = 223/426 (52%), Gaps = 17/426 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K + + I  E   I Q+ + ++L     +  +T Y G+D T+ SLH GHL  L LL
Sbjct: 1   MKHEKRNLIKIFKELKLIDQLIHEKKLVQTILKKNITLYCGFDPTSDSLHVGHLIPLFLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI L+GG TS+IGDPSFRD  R + +  +I+    KI      F      K
Sbjct: 61  KTFQNFGHKPIILVGGATSLIGDPSFRDSERSINQVDQIESWTRKIYNQIGIFFDSNHKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  W   +K ID L  +G  FS+  ML  E ++++L+  Q +SF EF+Y +LQ
Sbjct: 121 NKAIIVNNIEWFERMKIIDFLTTVGRNFSIKNMLRKELIKNKLENRQGISFSEFSYSLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF +L  +Y   LQ+GGSDQW NII GI+L ++L   ++F LT  L+T + G K GKT
Sbjct: 181 AYDFYKLYTDYHASLQIGGSDQWSNIIVGIELIKKLSRKEVFGLTFSLITNSIGRKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
               IWL+ + TSPY F+Q+W N+DD +   F   L     + I  +   +     + + 
Sbjct: 241 EKNNIWLDPKKTSPYCFYQFWINLDDRNAQMFFYLLLMSNSTLIHNLEMKK--YPKKIQY 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFD------------MSIHSQHMPTISISKDEVSR 348
            +A ++T ++HG+  ++ A   + + F+             +     +P I I   ++SR
Sbjct: 299 FLAKKVTEIIHGKYLSDMAHDISKKIFEYQKISQFKEEDFRNFLKLGVPKIEI---DLSR 355

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              +  ++VK+    S ++AR  +++++I +N     +++      +        +  GK
Sbjct: 356 RYDIQEILVKSKLLDSKSQARNMIENHSISVNFHPCEDKRFIFSENEQIFQRYSIVRKGK 415

Query: 409 KNHIIC 414
           K+ I+ 
Sbjct: 416 KDFILI 421


>gi|494688|pdb|1TYA|E Chain E, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 191/320 (59%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAAILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   +
Sbjct: 300 EEVTKLVHGEEALRQAIRIS 319


>gi|225849740|ref|YP_002729974.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645311|gb|ACO03497.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 410

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 104/387 (26%), Positives = 170/387 (43%), Gaps = 23/387 (5%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +    G+D TA  LH GH   L  L   Q+ GH    ++G  T++IGDPS RD++R  
Sbjct: 34  RPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTVYFIIGDFTAMIGDPSGRDKTRPP 93

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  +++ EN +  K      +         +++ N  WL  +   DL++ + + ++V RM
Sbjct: 94  LTKEQVLENAKTYKEQVFKVLDP----EKTVVVFNSEWLGDMTAQDLIK-LTARYTVARM 148

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  +  + R K  + ++  EF Y +LQAYD V +       +++GGSDQ  N++ G D+ 
Sbjct: 149 LERDDFKKRFKENKPIAIHEFIYPLLQAYDSVAIK----ADVELGGSDQRFNLLIGRDIQ 204

Query: 214 ERL-KTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           +         A+  PLL  T    KM K+    I + +    P   +    +I D  +  
Sbjct: 205 KEYGIEKPQVAILLPLLVGTDGVRKMSKSYGNYIGITEP---PEEMFGKLMSIPDDLMWD 261

Query: 272 FAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           + + LT L + EI++M     +      E KK +A  I T  H  E A KA         
Sbjct: 262 YWELLTDLSIEEIEKMKMDVEEGVLHPMEVKKQLAMYIVTRFHDEESAIKAREHFERVHS 321

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                + +P   I        + L  L+ K GFA S +EARR +K  A+KI+    ++  
Sbjct: 322 KREIPEEIPEPEIIVAT-EGKIPLYELVFKTGFAPSKSEARRLIKGGAVKIDGEKFTDPY 380

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ++ L          L  GK+      
Sbjct: 381 FEVDLT-----KEFVLQVGKRKFARIK 402


>gi|117620349|ref|YP_857617.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117561756|gb|ABK38704.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 399

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 171/420 (40%), Gaps = 26/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSQLEVALAEI--KRGAEEILVEEELVAKLKEGRPLRIKLGMDPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+++GDPS ++ +R  +  + I+ N           +      
Sbjct: 59  KTFQDLGHEVILLIGDFTAMVGDPSGKNATRPPLSEEAIKHNALTYAEQAFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    +++ + +  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIEYNSTWLSELGATGMIK-LAAKQTVARMMERDDFKKRYSNGQSIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVALK----ADVELGGTDQKFNLLMGRELQKDAGMATQCVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEIN 296
           + +  I ++    +P   +    +I D  + ++ + L+  P++EI+              
Sbjct: 230 SAANYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSFRPLAEIEEFKAGIAAGTLNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    AE A     + F  +     MP + ++ +    G+ +  L+
Sbjct: 287 DVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDEMPEVELALE--GEGLAIANLL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A    +T+EA R +K  A+K++   + + K           G      GK+      +
Sbjct: 345 KDADLVATTSEALRMIKQGAVKVDGEKLEDGKA------LIGAGTAVYQVGKRKFARVTV 398


>gi|120553631|ref|YP_957982.1| tyrosyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120323480|gb|ABM17795.1| tyrosyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 400

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 174/409 (42%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG    I     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  IIKRGIDELIPEEDLVEKLKEGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +   ++++N    K      +     +    ++ N  W
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLTEDQVRDNAITYKEQVFKILD----REKTRVVFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D++  +   ++V RML  +    R + EQ ++  EF Y ++Q YD V L    
Sbjct: 126 MSKMTAADMI-RLAGQYTVARMLERDDFTKRYRSEQPIAIHEFLYPLVQGYDSVAL---- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G  L +         LT P+L       KM K+L   + ++  
Sbjct: 181 EADIELGGTDQKFNLLMGRILQKHYGQKPQAILTVPILEGLDGVQKMSKSLGNYVGVS-- 238

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITT 308
             SP   +    ++ D  +  + + L+  PM+EI+          N  + K+++A E+ T
Sbjct: 239 -DSPGEMYTKLLSMPDELLWRYFELLSFRPMAEIEHFKAAVAGGENPQDYKRVLAEELIT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H  E A+ A  +A     +     ++P + +S  E    + +  ++  AG   +   A
Sbjct: 298 RFHDEEAAKTAHKSAGNRVALGAIPDNVPVVEVSL-EGQGEIPMPAVLRLAGLVKNGAAA 356

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L   A+ ++      +++      F +     +  GKK      + 
Sbjct: 357 RDVLGRGAVYVDGQQFEGQRM------FVAGDECVIQAGKKKIARVIIV 399


>gi|330830717|ref|YP_004393669.1| Tyrosyl-tRNA synthetase 2 [Aeromonas veronii B565]
 gi|328805853|gb|AEB51052.1| Tyrosyl-tRNA synthetase 2 [Aeromonas veronii B565]
          Length = 399

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 171/420 (40%), Gaps = 26/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSQLEVALAEI--KRGAEEILVEEELVAKLKEGRPLRIKLGMDPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+++GDPS ++ +R  +  + I+ N           +      
Sbjct: 59  KTFQDLGHEVILLIGDFTAMVGDPSGKNATRPPLSEEAIKHNALTYAEQAFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    +++ + +  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIEYNSTWLSELGATGMIK-LAAKQTVARMMERDDFKKRYTGGQSIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVALK----ADVELGGTDQKFNLLMGRELQKDAGMATQCVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEIN 296
           +    I ++    +P   +    +I D  + ++ + L+  P++EI+              
Sbjct: 230 SAGNYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSFRPLAEIEEFKAGIAAGTLNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    AE A     + F  +     MP I ++ +    G+ +  L+
Sbjct: 287 DVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDEMPEIELALE--GEGLAIANLL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +A    +T+EA R +K  A+K++   + + K           G      GK+      +
Sbjct: 345 KEADLVATTSEALRMIKQGAVKVDGEKLEDGKA------LIGAGTAVYQVGKRKFARVTV 398


>gi|237803468|ref|ZP_04591053.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025450|gb|EGI05506.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 399

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 168/409 (41%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRSYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGFKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHRSAGNRMKEGELPEDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|300113478|ref|YP_003760053.1| tyrosyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539415|gb|ADJ27732.1| tyrosyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 406

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 103/412 (25%), Positives = 179/412 (43%), Gaps = 23/412 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  +  RG    +        L    ++    G+D TA  LH GH   L  L   Q+ G
Sbjct: 7   ILDEIR-RGTEEVLLEEELKLRLEQGRILRVKAGFDPTAPELHLGHTVLLNKLRQFQELG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T +IGDPS ++ +R+ +   +I EN    +      +          ++ 
Sbjct: 66  HEVLFLIGDFTGMIGDPSGKNVTRQPLTRDKILENARTYEEQIFRVLDP----EKTQVVF 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  +     L  + S ++V RML  +    R + ++ ++  EF Y +LQ YD V L
Sbjct: 122 NSSWMSGMTA-ADLVRLSSHYTVARMLERDDFYKRYQGKRPIAIHEFLYPLLQGYDSVAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G DL +     +   +T P+L       KM K+L   I 
Sbjct: 181 K----ADVELGGTDQKFNLLVGRDLQKVYGQDQQIIITMPILEGLDGVQKMSKSLGNYIG 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           +++    P   +    +I D  +  + + L++ PMSEI R      QG    + K  +A 
Sbjct: 237 ISEP---PREIFGKLMSISDDLMWRYLELLSSRPMSEISRWKKEVEQGANPRDIKVKLAK 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H    AE+A  A +  F   +  + +P I I       G+ +  L+ ++   TS
Sbjct: 294 EIVARFHDDSMAEQAHEAFVAQFRRGVMPEDIPEIPIVAGR--EGIAIARLLKESALTTS 351

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R +K  A++I+   + N+ L              +  GK+      +
Sbjct: 352 TSEALRLIKQGAVRIDGQRLGNQSL-----HILPGITHVVQVGKRRFARVSV 398


>gi|313496801|gb|ADR58167.1| TyrS [Pseudomonas putida BIRD-1]
          Length = 399

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 170/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MDKLTPADFI-RLASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EI++            + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEGLPEIEVAAAE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S A+K++ +++ ++        F          GKK+     L
Sbjct: 355 RDLLNSGAVKVDGAVV-DKDFM-----FVLGATHVCQAGKKSFGRVTL 396


>gi|494690|pdb|1TYB|E Chain E, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 191/320 (59%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAGILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   +
Sbjct: 300 EEVTKLVHGEEALRQAIRIS 319


>gi|111225605|ref|YP_716399.1| tyrosine tRNA synthetase [Frankia alni ACN14a]
 gi|111153137|emb|CAJ64884.1| tyrosine tRNA synthetase [Frankia alni ACN14a]
          Length = 429

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 129/418 (30%), Positives = 211/418 (50%), Gaps = 17/418 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG IH  ++P EL      G    YIG+D TA SL  G+L  + LL    + G
Sbjct: 5   LLDELSWRGLIHDSTDPAELRDHLDSGGRRCYIGFDPTAPSLTIGNLLPITLLIRAARAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-ML 126
              ++L GGGT +IGDPS +   R ++  ++++ N+ + + I  +         +    +
Sbjct: 65  LGAVTLFGGGTGLIGDPSGKSAERSLLTVEDVRANVARHREIMETIFGRALAAEEIPAFV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           +N  WL  +  I+ LR++G  F V  M+  +SVR RL      L++ EF+Y +LQAYDF 
Sbjct: 125 DNGDWLGGLGMIEFLRDVGKHFPVTEMIRRDSVRRRLDDPDVGLTYTEFSYSLLQAYDFR 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +++   LQMG SDQWGNI+ GID   R+   ++  LT PLL  A GTK GK+  GA+
Sbjct: 185 RLCEDHGVTLQMGASDQWGNIVAGIDYVRRVLRTQVHGLTCPLLLRADGTKFGKSEKGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL  + TSPY  +Q+  N+ D +   FA   +      ++R      +       ++ +A
Sbjct: 245 WLTADRTSPYTLYQFLINLSDDEARRFALFFSLTDREPLERLFAEHAEAPGRRALQRHLA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTIS--ISKDEVSRGMG 351
            E+T ++HG+   + A  A+   F            S     +PT++  +++     G  
Sbjct: 305 REMTALMHGQPAVDAAEAASAALFSGDVKAIGADLISDVFADVPTVTEPLARLAADGGWP 364

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           ++ L++  G A+S  +AR HL + A+ +N   I + +  +  +D      I +  G++
Sbjct: 365 VVDLLLATGLASSRRDAREHLGNRAVLVNGDRI-DAEATVTEKDLLHGSVILVRRGRR 421


>gi|237748967|ref|ZP_04579447.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380329|gb|EEO30420.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 414

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 98/422 (23%), Positives = 172/422 (40%), Gaps = 33/422 (7%)

Query: 6   SDFLSI---LSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLM 58
           SD +     ++ RG    +        L     +   +   +G D TA  LH GH   L 
Sbjct: 16  SDAVREAMAITLRGCDELLIESEFAQKLARSEKTGKPLRIKLGLDPTAPDLHLGHTVVLN 75

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++++EN        S  +    
Sbjct: 76  KMRQLQNLGHVVIFLIGDFTSMIGDPSGRNITRPPLTREQVKENAMTYFAQASLVLDP-- 133

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +  N  W   +     + ++ S +++ R++  E   +R K    +S  E  Y +
Sbjct: 134 --EKTEIRYNSEWSDKLGA-AGMIQLASQYTLARIMEREDFANRFKNGFPISVHELLYPL 190

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKM 237
           +Q YD V L       L++GG+DQ  N++ G +L           LT PLL       KM
Sbjct: 191 MQGYDSVALQ----SDLELGGTDQKFNLLVGRELQRHYNQEPQCILTMPLLEGLDGVEKM 246

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEI 295
            K+    + + +     +       +I D  +  +   L+   + +++R       GK  
Sbjct: 247 SKSKGNYVGITEPANIMF---GKLMSISDEMMWRYYDLLSFKSIQDVERLKEEVKNGKNP 303

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            + K  +  EI T  H    A+ A    +      I    +P +S+S       +G+  L
Sbjct: 304 RDVKVELGKEIVTRFHSGAAADAALEDFVARSRGGIP-DDIPAVSLS----GAPLGIGQL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +AG   ST+EA R +    ++I++  IS+  L+++   F       +  GK+      
Sbjct: 359 LKQAGLCASTSEALRLVDQGGVRIDSQTISDRGLKVEAGSF------VVQVGKRKFAKVT 412

Query: 416 LC 417
           L 
Sbjct: 413 LA 414


>gi|15604781|ref|NP_219565.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|166154283|ref|YP_001654401.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155158|ref|YP_001653413.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|237802496|ref|YP_002887690.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|301335534|ref|ZP_07223778.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|14195228|sp|O84065|SYY_CHLTR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783579|sp|B0B9H0|SYY_CHLT2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783580|sp|B0BB49|SYY_CHLTB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|3328456|gb|AAC67653.1| tyrosyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|165930271|emb|CAP03757.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931146|emb|CAP06711.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|231273730|emb|CAX10509.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296438367|gb|ADH20520.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|297748192|gb|ADI50738.1| Tyrosyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749072|gb|ADI51750.1| Tyrosyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 412

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 134/422 (31%), Positives = 214/422 (50%), Gaps = 21/422 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L 
Sbjct: 1   MQQLIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLRRLA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          
Sbjct: 57  AYGITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYLP------GIR 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF
Sbjct: 111 IVNNADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG 
Sbjct: 171 AHLFKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA 
Sbjct: 231 IWLDPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPT----------ISISKDEVSRGMGLLT 354
            I   VHG E   +A  A    F     S               + +++ ++  G   L 
Sbjct: 291 VIVKDVHGSEGLAQAQAATESFFASKGKSITEAELVALVESGVGVKVARADLI-GKRWLD 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V+ GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   + 
Sbjct: 350 IVVELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVI 409

Query: 415 HL 416
            L
Sbjct: 410 DL 411


>gi|330505225|ref|YP_004382094.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328919511|gb|AEB60342.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 399

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 167/408 (40%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ +
Sbjct: 10  LIKRGAEEVLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +K  D +  + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MDQLKPADFI-RLASQYTVARMLERDDFDKRYTGNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQESQCIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITT 308
              P   +    ++ D  +  + + L+   M EI++  +   +     + K  +A E+  
Sbjct: 241 ---PGVMYNKLVSMPDVLMWRYFELLSFRSMEEIEQFKRDVEQGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P + +   E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHRSAGNRMKDGELPADLPEVELVSVE---DMPISSVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++       +   F          GKK      L
Sbjct: 355 RDLLGSGGVRVDGEVVD------RAFLFKLGSTHVCQAGKKAFARITL 396


>gi|78049566|ref|YP_365741.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|115305831|sp|Q3BNC2|SYY_XANC5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78037996|emb|CAJ25741.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 403

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 159/411 (38%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L +   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEILKLDQLQARLATGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILD----RERTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++      +V RML  +    R   +Q ++  EF Y ++Q YD V L    
Sbjct: 126 FGQMSAADMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I +N+ 
Sbjct: 182 -ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEINEAKKIIATEI 306
                +       I D     +   L+        + +            E K  +A E+
Sbjct: 241 ---AIDIVTKTMKIGDELTWRWIDLLSFDISLAEAARLKEQVAAGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +   +   G+ L  L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVPD--EGLRLAGLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++I+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVRIDGEVVEDPSRV-----FTHGFEGVIQVGKRNFARVLLV 401


>gi|494693|pdb|1TYD|E Chain E, Structure Of Tyrosyl-Trna Synthetase Refined At 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
          Length = 319

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 191/320 (59%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLASILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+       +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   +
Sbjct: 300 EEVTKLVHGEEALRQAIRIS 319


>gi|331017519|gb|EGH97575.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 399

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/409 (24%), Positives = 169/409 (41%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  R     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAATAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +    +KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFIVKL-----GATHVCQAGKKAFGRITLV 397


>gi|28867837|ref|NP_790456.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|301381481|ref|ZP_07229899.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058570|ref|ZP_07250111.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302132204|ref|ZP_07258194.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|81732643|sp|Q889Y8|SYY_PSESM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28851073|gb|AAO54151.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 403

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/409 (24%), Positives = 169/409 (41%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  R     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAATAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +    +KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFIVKL-----GATHVCQAGKKAFGRITLV 397


>gi|104779737|ref|YP_606235.1| tyrosyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|95108724|emb|CAK13418.1| tyrosyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 399

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 167/409 (40%), Gaps = 26/409 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGEPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLTPADFIRLASQYTVARMLERDDFDKRYTSNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EID+      +G    + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSMDEIDQFRADVEKGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKDGELPEDLPEIEVAAAE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIIS-NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+K++ +++  +    +               GKK      L
Sbjct: 355 RDLLSGGAVKVDGAVVERDFMFAL-------GATHVCQAGKKAFARVTL 396


>gi|330898958|gb|EGH30377.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 403

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 164/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EID  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEIDGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|320164665|gb|EFW41564.1| tyrosyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 500

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 121/454 (26%), Positives = 212/454 (46%), Gaps = 58/454 (12%)

Query: 9   LSILSERGFIHQISNP-RELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           L+ L  RG +H  ++    L            Y G+D TA SLHAG+L  LM +    + 
Sbjct: 50  LTELQWRGLLHAHTSSFEGLAATLRSPNRACLYAGFDPTADSLHAGNLLVLMGMLHFHRA 109

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I+L+GG T  +GDPS R   R M+    +  N               +      ++
Sbjct: 110 GHQVIALVGGATGQVGDPSGRQTERSMLAVNTVASNAAGS---------PTSSPKPVTVV 160

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ---------SLSFLEFNYM 177
           NN  W   +  ++ +R++G  F +  ML  ESV+SRL+ +           +SF EF Y 
Sbjct: 161 NNLDWYAPMNVLEFVRDVGQHFRMTTMLGKESVKSRLQPQSTSASGTEPAGMSFTEFTYQ 220

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           + QAYD+ +L +   CRLQ+GGSDQWGNI  G DL  ++   +   +T PL+TT++G K 
Sbjct: 221 LFQAYDYYQLHERNQCRLQLGGSDQWGNITAGCDLIRKVTGKEAHGVTMPLVTTSTGEKF 280

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GK++  A+W++   T+P+ ++Q++   +D+    + +  T L + EI  +A+   +  N+
Sbjct: 281 GKSMGNAVWMDAAKTTPFEWYQFFLRSEDSQAERYLRYYTFLSLDEITDIARRHAEAPNK 340

Query: 298 --AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM------------------- 336
             A+  +A ++T +VHGRE   +A  +    +                            
Sbjct: 341 RIAQTALADQVTLLVHGREGLAEAHRSTKLLYHRGGSGSGSPNSTNSNEVQATDSSNSPF 400

Query: 337 ---------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                          P+I++S+ E+ + + L+  +V+ G   S +EA++ +++  + +N+
Sbjct: 401 ELTSAEVAALLSAQTPSINVSRSELGQ-LLLIDALVRLGLTPSKSEAKKLIRNGGVSVNS 459

Query: 382 SIISNEKLQIKLQDFDST-GNIKLSFGKKNHIIC 414
               NE+  +             L  GK+ H + 
Sbjct: 460 VKSVNERDVLGENHALKDSNATLLRVGKRAHGLV 493


>gi|76788775|ref|YP_327861.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|97197647|sp|Q3KMV9|SYY_CHLTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76167305|gb|AAX50313.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 412

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 135/422 (31%), Positives = 214/422 (50%), Gaps = 21/422 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L 
Sbjct: 1   MQQLIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLRRLA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          
Sbjct: 57  AYGITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYLP------GIR 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF
Sbjct: 111 IVNNADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG 
Sbjct: 171 AHLFKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA 
Sbjct: 231 IWLDPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LT 354
            I   VHG E   +A  A    F     S     + ++  E   G+ +          L 
Sbjct: 291 VIVKDVHGSEGLAQAQAATESFFASKGKSITEAEL-VALVESGVGVKVARTDLIGKRWLD 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V+ GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   + 
Sbjct: 350 IVVELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVI 409

Query: 415 HL 416
            L
Sbjct: 410 DL 411


>gi|237746826|ref|ZP_04577306.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378177|gb|EEO28268.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 415

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 168/410 (40%), Gaps = 30/410 (7%)

Query: 15  RGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +        L     +   +   +G D TA  LH GH   L  +  LQ  GH  
Sbjct: 29  RGCDELLIESEFARKLARSEKTGKPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQDLGHVV 88

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  +  ++++EN        S  +          +  N  
Sbjct: 89  IFLIGDFTSMIGDPSGRNVTRPPLTREQVKENAMTYFSQASLVLDP----ERTEIRYNSE 144

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W         + ++ S +++ R++  +    R +    +S  E  Y ++Q YD V L   
Sbjct: 145 W-SDELGARGMIQLASQYTLARIMERDDFAKRFRNGNPISVHELLYPLMQGYDSVALK-- 201

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G +L  +        LT PLL       KM K+    + + +
Sbjct: 202 --SDMELGGTDQKFNLLVGRELQRQYGQEPQCILTMPLLEGLDGVEKMSKSKGNYVGITE 259

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEIT 307
                +       +I D  +  +   L+   + EI+R       G+   + K     EI 
Sbjct: 260 PGNVMF---GKLMSISDEMMWRYYDLLSFRSIDEIERLKEEVRNGRNPRDVKVAFCQEIV 316

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  H + +A+ A    M      I    +P++S++       +G+  ++ +AG   ST+E
Sbjct: 317 TRFHSKADADAALEDFMARSRGGIP-DDIPSVSLN----GAPLGIGQVLKQAGLCASTSE 371

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R +    +++++S +S+  L++        G   +  GK+      L 
Sbjct: 372 ALRLVDQGGVRVDSSTVSDRGLKLGA------GTFVVQVGKRKFAKVTLS 415


>gi|28493136|ref|NP_787297.1| tyrosyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28572750|ref|NP_789530.1| tyrosyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81437905|sp|Q83GS7|SYY_TROWT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81629794|sp|Q83HH5|SYY_TROW8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28410883|emb|CAD67268.1| tyrosyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28476176|gb|AAO44266.1| tyrosyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 471

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 137/473 (28%), Positives = 220/473 (46%), Gaps = 63/473 (13%)

Query: 1   MPA--FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           MP     +     L  RG +   ++   L  L     +  Y G+D TA SLH G+L Q++
Sbjct: 1   MPNAPEVNSVWDELLWRGLVCVSTDQGALKELLDGPPIRFYCGFDPTAPSLHVGNLAQIL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           ++  LQ  GH+PI+L+GG T +IGDP      R++   +++QE +  ++   S F+ +  
Sbjct: 61  IMRRLQLAGHRPIALVGGSTGLIGDPRP-GGERQLHSHEQVQEWVRALQQQLSRFLDFK- 118

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
           G   A+++NN  W  S+  +D LRE+G  F VN ML  ++V +RL   + +S+ EF+Y I
Sbjct: 119 GAAAAVLVNNLDWTKSLTALDFLRELGKHFRVNAMLKKDAVAARLSSTEGISYTEFSYQI 178

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+ DF +L  +Y C LQ+GGSDQWGNI  G+DL  + +   + A  SPLLT + G+K G
Sbjct: 179 LQSLDFRQLYLDYKCVLQIGGSDQWGNITSGVDLIRKTEGAGVHAFGSPLLTASDGSKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           KT   AIWL+ ++TSP++F+Q++ N DDAD+    +  T    SEI+    +  +     
Sbjct: 239 KTEGNAIWLDADLTSPWSFYQFFLNSDDADIPRLLRVFTFFTRSEIEDLNRSVRENASAR 298

Query: 297 EAKKIIATEITTMVHGREEAEK----AATAAMECFDMSIHSQHMPTI------------- 339
            A + +A  +T +VHG + A++     +    +   +      +P I             
Sbjct: 299 LAHRHLAYSVTRLVHGADVADQVLLACSVLFGDGGALGKTQTGLPRIDSDTLNDSSGVTT 358

Query: 340 ----------------------------------SISKDEVSRGMGLLTLIVKAGFATST 365
                                              +    VS    +  ++ K G   S 
Sbjct: 359 IKAQDNTYTPYSPEGVRFAGTFPVDPRFLRSILFELPNATVSAHDLITHILQKVGLCRSL 418

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDST----GNIKLSFGKKNHIIC 414
           +EARR +    I +NN  ++     +    F           L  GKK+    
Sbjct: 419 SEARRLISQGGIYVNNIKVTCPDALLDS--FLDNSMPIRAAILRKGKKHLAAV 469


>gi|114777315|ref|ZP_01452326.1| tyrosyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552460|gb|EAU54943.1| tyrosyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 394

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 100/410 (24%), Positives = 172/410 (41%), Gaps = 30/410 (7%)

Query: 12  LSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG +  +        L         +    G+D TA  LH GH   L  L   Q  G
Sbjct: 9   LLSRGTLEVLPAGALEAKLKLAAKEGRPLRVKAGFDPTAPDLHLGHTVLLEKLRQFQHCG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T  IGDP+ ++E+R  +   E+  N E  K      +          +  
Sbjct: 69  HQVVFLIGDFTGTIGDPTGKNETRPPLTHDEVLLNAESYKEQVFKVLDPKQ----TEVRF 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +   DL+R  G   +V RML  +    R K  QS++  EF Y ++Q YD V L
Sbjct: 125 NSEWLGQLTAADLIRIAGK-ATVARMLERDDFEKRYKGGQSIAIHEFLYPLVQGYDSVAL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
               D  +++GG+DQ  N++ G  L +     +   +T PLL    G  KM K+L+  + 
Sbjct: 184 ----DADVELGGNDQKFNLLMGRQLQDAYGKAQQVIMTMPLLEGLDGINKMSKSLNNYVG 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           + +        +    ++ D  +  + + LT + + EI            EAKK++A  I
Sbjct: 240 VAEP---AKEQFGKLMSVSDDLMFKYYELLTDMDLDEIRA------MHPMEAKKLLAATI 290

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               HG     +A       F        +P  +++ ++    + ++  + +AG   S  
Sbjct: 291 VERFHGEGAGAQARAGFESQFAKKEIPDDVPEATLAGED--GALWIVHALTQAGLTASNG 348

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R +K NA+ I+   ++++ L++        G   +  GK+  +   +
Sbjct: 349 EAIRMIKQNALSIDGDKVTDKDLKLAP-----GGPYLIKLGKRKFVNLTV 393


>gi|107099634|ref|ZP_01363552.1| hypothetical protein PaerPA_01000650 [Pseudomonas aeruginosa PACS2]
          Length = 399

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 162/408 (39%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     L  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELLAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   I + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   + EID   K         + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S       M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKEGELPEDLPEIELSS---PEDMPVASVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + ++K++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGSVKVDGQVV-DRTFMLAL-----GETRVFQAGKKAFARITL 396


>gi|303230712|ref|ZP_07317459.1| tyrosine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514472|gb|EFL56467.1| tyrosine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 402

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 98/407 (24%), Positives = 172/407 (42%), Gaps = 30/407 (7%)

Query: 18  IHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  I N  +L       +     +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VSGIINEEDLVKKIERSIKENKPLIVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDP----EKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR   S+ +V RM+  +    R K  + +   EF Y ++Q  D V L     
Sbjct: 131 ESMNFADVLRLASSY-TVARMMERDDFDKRYKEGRPIGVHEFMYPLMQGQDSVALH---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL       KM K+L   I +++  
Sbjct: 186 ADVEFGGTDQTFNLLMGRHLQELAGQEPQVVITMPLLEGLDGVQKMSKSLGNYIGIDEA- 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P + +    +I D  ++ +   +T + + + D M +          +AK  +A  I  
Sbjct: 245 --PKDMYGKAMSIPDELMMRYFMLVTDMSIEDQDDMEERLENGTLHPRDAKMQLAKTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG + A++A       F        +P  +I K   S  + +      AG   S  EA
Sbjct: 303 LYHGEQAAQEAEDEFKRVFQQHALPTDIPEYAIDKP--SEAIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K+ A K+N      E L ++         + +  GK+  +   
Sbjct: 361 RRSIKAGAFKVNGEKYGEENLVLEDG-------MIVQVGKRKFVKIK 400


>gi|149713907|ref|XP_001503258.1| PREDICTED: similar to LOC536956 protein [Equus caballus]
          Length = 478

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 133/432 (30%), Positives = 208/432 (48%), Gaps = 29/432 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +    R    EL  L  +        T Y G+D TA SLH GHL  L+ LF  
Sbjct: 43  KARGLFKEFFPDRGTKIELPELFDRRTAGHLPQTIYCGFDPTADSLHVGHLLTLLGLFHF 102

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKY 116
           Q+ GH  I+L+GG T+ +GDPS R + R  + ++ +Q N   ++                
Sbjct: 103 QRAGHNVIALVGGATARLGDPSGRTKEREALDAERVQSNARALRRELETLAAHHQQLFTN 162

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N +W      +D L  +G  F +  +LS +SV++RLK  + +S  EF Y
Sbjct: 163 GRTWGSFTVLDNSSWYQQQHLVDFLAAVGGHFRMGTLLSRQSVQTRLKSPEGMSLAEFLY 222

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 223 QVLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 282

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           +GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +   KE  
Sbjct: 283 LGKSAGNAVWLNRDKTSPFELYQFFVRQQDDSVERYLKLFTFLPLPEIDHIMQQHVKEPE 342

Query: 297 EA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKD 344
           +   +K +A E+T +VHG+E  + A       +  SI +  +             S S+ 
Sbjct: 343 KWGPQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEASFSEL 402

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIK 403
            +  G  +L    KA          R +    + IN+  ++N +  + + Q     G   
Sbjct: 403 VLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSL 462

Query: 404 LSFGKKNHIICH 415
           L  GK+N  I  
Sbjct: 463 LKIGKRNFYIIK 474


>gi|194333540|ref|YP_002015400.1| tyrosyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311358|gb|ACF45753.1| tyrosyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 406

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 172/409 (42%), Gaps = 25/409 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L     +  IS       L     +   +   +G D +   LH GH   L  L   Q  
Sbjct: 11  DLIINNTVEVISEEELEKKLDKSIKTGKPLKVKLGADPSRPDLHLGHSVVLRKLRDFQDL 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I ++G  T++IGDPS + ++R  + +QE +EN E      S  +          + 
Sbjct: 71  GHEAILIIGDFTAMIGDPSGKSKTRPQLSAQEARENGETYFEQASKILDP----EKTTIC 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + +   +  + S ++V RML  +    R +  + +S  EF Y + Q  D V 
Sbjct: 127 YNSEWLGKMTF-SDVIRLSSHYTVARMLERDDFERRYQSCEPISIHEFLYPLAQGMDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G DL           +T PLL       KM K+L  AI
Sbjct: 186 LKND----IELGGTDQKFNLLVGRDLQREYHIDPQVCITMPLLVGTFGDEKMSKSLGNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
                  S  + +    +I D+ + ++ K L   P   I    ++  +   EAK+ +A E
Sbjct: 242 SFT---DSAQDVYGKTLSIPDSLIETWFKLLVPQPRQSIKLFMEIIRQNPREAKRTLARE 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  + H   +A KA       F      +++   +         M L+ L+ +     S 
Sbjct: 299 LVALYHCDTDAVKAEEHFDRVFVQKKAPENIEVFTFRSST----MQLVELLGELQAVGSK 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +EARR ++ NAI+I++  IS+   +++L D        +  GK+     
Sbjct: 355 SEARRLIQQNAIQIDDEKISSIDYEVELNDTPK----IIKAGKRKFFKV 399


>gi|262380680|ref|ZP_06073833.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|262297628|gb|EEY85544.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 410

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 178/419 (42%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKVKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH    L+G  T++IGDP+ +  +R  +  +++ EN +  +      ++    
Sbjct: 67  LKVFQDLGHDVYFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILEP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++ N  W  S    DL+ ++ S  +V RML  +    R   +Q ++  EF Y ++
Sbjct: 124 -NKTKVVFNSEWFASKTAADLI-QLASQQTVARMLERDDFTKRYSSQQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYHQEPQVCITVPILEGLDGVQKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           K+L   I +     +P   +Q   ++ D+ +  + + L+   M EI       ++G+   
Sbjct: 238 KSLGNYIGVF---DAPGAMYQKVLSMPDSLIERYFELLSFKSMPEIQDLLKEMVEGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    HG E A  A   A          +  P ++IS+ E    + + +++
Sbjct: 295 EIKRILALELVERFHGSEAAANAHKGAGNIITEGELPEGTPEVTISRAEFGGEIFIASIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +  +A+  +   A+K++  ++ +    +K           +  GKK      
Sbjct: 355 RTAGLTKNAAQAKDAVARGAVKVDWEVV-DADFSVKE-----NKTYIIQAGKKAIAKVT 407


>gi|301762422|ref|XP_002916632.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
 gi|281349046|gb|EFB24630.1| hypothetical protein PANDA_004722 [Ailuropoda melanoleuca]
          Length = 477

 Score =  297 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 132/436 (30%), Positives = 210/436 (48%), Gaps = 28/436 (6%)

Query: 8   FLSILSERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLML 59
            L++   RG   +    R    EL  L  +G      T Y G+D TA SLH GHL  L+ 
Sbjct: 38  LLAVQKARGLFREFFPERGTKIELPELFDRGTGNFPQTIYCGFDPTADSLHVGHLLSLLG 97

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSS 112
           LF  Q+ GH  I+++GG T+ +GDPS R + R  +  + ++ N        E +      
Sbjct: 98  LFHFQRAGHNVIAVVGGATARLGDPSGRTKEREALEPERVRSNARALRQGLEAMVANHQQ 157

Query: 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
               G       +L+N  W      +D L  +G  F +  +LS +SV++RLK  + +S  
Sbjct: 158 LFANGRTWGSFTVLDNSAWYHKQHLVDFLAAVGGQFRMGTLLSRQSVQTRLKSPEGMSLA 217

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ 
Sbjct: 218 EFLYQVLQAYDFYHLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITST 277

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           +G K+GK+   A+WLN++ TSP+  +Q++    D  V  + +  T LP+ EID + +L  
Sbjct: 278 TGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQQDDTVERYLRLFTFLPLPEIDHLMQLHD 337

Query: 293 --KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTIS 340
              E    +K +A E+T +VHG+E  + A       +  SI +  +             S
Sbjct: 338 KEPEKRGPQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELRELFKEAS 397

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDST 399
            S+  +  G  +L    KA          R +    + IN+  ++N +  + + Q     
Sbjct: 398 FSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHKQVTNPESVLVVGQHILKN 457

Query: 400 GNIKLSFGKKNHIICH 415
           G   L  GK+N  +  
Sbjct: 458 GLSLLKIGKRNFYVIK 473


>gi|330970780|gb|EGH70846.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 399

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 164/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EID  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEIDGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P +S++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPELSVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|188996488|ref|YP_001930739.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931555|gb|ACD66185.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 400

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 101/409 (24%), Positives = 177/409 (43%), Gaps = 25/409 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + ++G +  IS    L  L  +  +    G+D TA  LH GH   L  L   Q+ GH  
Sbjct: 9   EIIKKGVLEIISEEELLKKLKEERPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++G  T++IGDPS RD++R  +  +++ EN +  K      +         +++ N  
Sbjct: 69  FFIIGDFTAMIGDPSGRDQTRPPLTKEQVLENAKTYKEQVFKVLDP----EKTVVVFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   + L ++ + ++V RML  E  + R K    +S  EF Y +LQAYD V +   
Sbjct: 125 WLGKMTA-EDLIKLSAKYTVARMLEREDFKKRFKENIPISIHEFIYPLLQAYDSVAIK-- 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL-TTASGTKMGKTLSGAIWLN 248
               +++GGSDQ  N++ G D+ +         A+  PLL  T    KM K+    I + 
Sbjct: 182 --ADVELGGSDQRFNLLIGRDIQKEYGIENPQVAILLPLLVGTDGVKKMSKSYGNYIGIT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +    P   +    +I D  +  + + LT L + EI+++ +   K      E KK +   
Sbjct: 240 EP---PEEMFGKIMSISDELMWQYWELLTDLTVEEINKLKEDVQKGILHPMEVKKQLGMY 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H +E+A +A     +        + +P    S+   +    L  +I     A + 
Sbjct: 297 IVERFHSKEDAIRAREHFEKVHSKKEIPEDIPVFKASEITETE---LFEIIFNLKLAETK 353

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            EA+R +K   +K+N   I++   +  L        + +  GK+     
Sbjct: 354 AEAKRLIKQGGVKVNGEKITDPMHKPDLA-----RQLIIQVGKRKFAKI 397


>gi|170723924|ref|YP_001751612.1| tyrosyl-tRNA synthetase [Pseudomonas putida W619]
 gi|169761927|gb|ACA75243.1| tyrosyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 399

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 166/409 (40%), Gaps = 26/409 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ +
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MDKLTPADFI-RLASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQCIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EI++            + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSMDEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++  A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEIEVAAAE---DLPIAAVLNRAGLVKNSAMA 354

Query: 369 RRHLKSNAIKINNSIIS-NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+K++  ++  +    +               GKK      L
Sbjct: 355 RDLLNGGAVKVDGVVVERDFMFAL-------GATHVCQAGKKAFARVKL 396


>gi|71066524|ref|YP_265251.1| tyrosyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|115305820|sp|Q4FQ91|SYY_PSYA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71039509|gb|AAZ19817.1| tyrosyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 403

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 92/422 (21%), Positives = 180/422 (42%), Gaps = 26/422 (6%)

Query: 1   MPAFKSDFLSI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M   K+  L     L +RG    +S    +  L     +    G+D TA  LH GH   +
Sbjct: 1   MTE-KTYTLEEQLALIQRGAQEILSEEDLVKKLKLNRPLRIKAGFDPTAPDLHLGHTVLI 59

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
             L   Q  GH+   L+G  T+ IGDPS ++ +R  +  ++I+ N E         +   
Sbjct: 60  NKLKHFQDLGHEIYFLIGDYTAKIGDPSGKNSTRPPLTDEQIKANAETYAEQVFKILD-- 117

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
             K    ++ N  W   +   D++ ++ S  +V+RML  +    R   +  ++  EF Y 
Sbjct: 118 --KEKTRVVFNSEWFNDMSAADMI-QLASHQTVSRMLERDDFSKRYASQTPIAIHEFLYP 174

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTK 236
           ++Q YD + L       +++GG+DQ  N++ G  L  R    +   +T P+L       K
Sbjct: 175 LVQGYDSIALK----ADVELGGTDQTFNLLMGRTLQGRYGQEQQVCITVPILEGLDGVNK 230

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           M K+L+  + +     +P   +Q   ++ D  +  + + L+  PM E++ +        N
Sbjct: 231 MSKSLNNYVGIY---DAPGTMYQKLLSMPDTLIRRYFEFLSFKPMEEVENLMAEMEDGRN 287

Query: 297 --EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             E K+I+A E+    H  + A  A  +A            +P +++   E    + +  
Sbjct: 288 PQEIKRILAEELIERFHDADAAANAHKSAGNVLADGELPVDLPEVTLEL-EGQDALFITQ 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++ +A  A +++ A+  +K  A+K++  ++ +    +          + +  GKK +   
Sbjct: 347 ILNQAALAKNSSSAKDMIKRGAVKVDGEVV-DAGFSLTA-----GQTVVIQAGKKAYAKV 400

Query: 415 HL 416
            +
Sbjct: 401 TV 402


>gi|319778566|ref|YP_004129479.1| Tyrosyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108590|gb|ADU91336.1| Tyrosyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 407

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 186/413 (45%), Gaps = 29/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +  RG    +     L+ L     S   +   +G D TA  LH GH   L  +  LQ  
Sbjct: 16  DIVRRGTDEILVESEFLEKLQKSHDSGTPLRIKLGLDPTAPDLHLGHTVVLTKMRQLQDM 75

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T+ IGDPS R+ +R  +  ++I+ N +      S  +      +  ++ 
Sbjct: 76  GHEVIFLIGDFTATIGDPSGRNATRPPLTKEQIEVNAQTYYDQASKVLDP----SKTVIS 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W C       L E+ S ++V R++  +    R K    +S  E  Y ++Q YD V 
Sbjct: 132 YNSKW-CDALGARGLIELASKYTVARIMERDDFTKRFKGGIPISMHEILYPLMQGYDSVA 190

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G +L +    P+   LT PLL       KM K+ +  I
Sbjct: 191 LK----SDMELGGTDQKFNLLVGRELQKEYGQPQQTVLTMPLLVGLDGVEKMSKSKNNYI 246

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            + +   +P + +    +I D+ + ++ + +++  + EI ++ +    G      K  +A
Sbjct: 247 GITE---TPDSMFGKIMSISDSLMWNYYELISSKSLDEIKKLKQDVEDGINPRNIKVALA 303

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI T  H  + AEKA       F      + +P +++   E    MG+++++ ++G A 
Sbjct: 304 QEIITRFHNSQAAEKALADFELRFRDGQIPEDIPEVTLPGPE----MGIVSVLRESGLAV 359

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +EA R++    +K++ S + ++ L +K       G   +  GK+      +
Sbjct: 360 SGSEASRNIVQGGVKVDGSKVEDKGLILKS------GTYVVQIGKRKFARITI 406


>gi|330891258|gb|EGH23919.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 398

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 101/409 (24%), Positives = 168/409 (41%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  R     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAATE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK     +L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGRVNLV 397


>gi|330961004|gb|EGH61264.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 399

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 167/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRSYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGFKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPADLPEISVTASE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|313679536|ref|YP_004057275.1| tyrosyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152251|gb|ADR36102.1| tyrosyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 435

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 97/440 (22%), Positives = 169/440 (38%), Gaps = 50/440 (11%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I+       L S   +   +G D T   LH GH   L  +   Q+ GHK I
Sbjct: 9   LLRRGTAEIITEADLKQKLASGRPLRIKLGVDPTRPDLHLGHAVVLRKMRQFQELGHKVI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS R ++R  +  +E +EN           ++         +  N  W
Sbjct: 69  LLIGDFTGMIGDPSGRSKTRPPLTLEETRENARSYVEQARKILRQEPEV--FELRYNSEW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + + +++R      +V +ML  E  + R      +   EF Y + Q YD V L    
Sbjct: 127 LAKLTFEEVIRIAAQM-TVAQMLEREDFKKRYTEGVPIGIHEFLYPLAQGYDSVAL---- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  ++MGG+DQ  N++ G DL +         +  PLL       KM K+L   + +++ 
Sbjct: 182 EADVEMGGTDQKFNLLVGRDLQKFYGQEPQVLVIMPLLVGLDGVEKMSKSLDNYVGVSE- 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL------QGKEIN-----EAK 299
              P   ++    + DA +  + + LT L   E++ + +                   A+
Sbjct: 241 --EPAVMFKKLMRVPDAVLADYFRLLTDLEPEEVEAVIEKGGMVGAHRVLARLLTAAYAQ 298

Query: 300 KIIATEITTMVHGREEAEKAA----------------------TAAMECFDMSIHSQHMP 337
            +I   +    + R                              A  +          +P
Sbjct: 299 DVIPAWLDRAFYERLGYRFDEAGRDEAPRDPQEAELARTVAQAEARYDEVAKGGVPDDIP 358

Query: 338 TISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           T++I   E+  G + +  L   AG   S  EARR +++  ++++  +I++ +LQ+ L   
Sbjct: 359 TVAIDPSELKDGAIWVARLFTLAGLTQSNGEARRLIQNRGLRLDGEVITDPQLQVTL--- 415

Query: 397 DSTGNIKLSFGKKNHIICHL 416
                  L  GK   +   L
Sbjct: 416 --DRPRILRRGKDKFVRVVL 433


>gi|237804411|ref|YP_002888565.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272711|emb|CAX09615.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 412

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 134/422 (31%), Positives = 214/422 (50%), Gaps = 21/422 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L 
Sbjct: 1   MQQLIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLRRLA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          
Sbjct: 57  AYGITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYLP------GIR 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF
Sbjct: 111 IVNNADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG 
Sbjct: 171 AHLFKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA 
Sbjct: 231 IWLDPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPT----------ISISKDEVSRGMGLLT 354
            I   VHG E   +A  A    F     S               + +++ ++  G   L 
Sbjct: 291 VIVKDVHGSEGLAQAQAATESFFASKGKSITEVELVALVESGVGVKVARADLI-GKRWLD 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V+ GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   + 
Sbjct: 350 IVVELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVI 409

Query: 415 HL 416
            L
Sbjct: 410 DL 411


>gi|325294991|ref|YP_004281505.1| Tyrosyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065439|gb|ADY73446.1| Tyrosyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 408

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 107/408 (26%), Positives = 173/408 (42%), Gaps = 22/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG    I     L  L  + V+    G+D TA  LH GH   L  L   Q+ GHK  
Sbjct: 9   IIKRGTAEIIGENELLKKLKEKKVLYVKAGFDPTAPDLHLGHTVLLWKLRDFQELGHKVY 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T++IGDP+ + E+R  +  +E+ +N E         +         +++ N  W
Sbjct: 69  FLIGDFTAMIGDPTGKSETRPPLTKEEVLKNAETYAQQVFKILDP----EKTVVVFNSEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +   DL++ + S ++V RML  +    R K  +S+   EF Y +LQ YD V L    
Sbjct: 125 LDKMTATDLIK-LSSKYTVARMLERDDFSKRFKEGRSIHIHEFIYPLLQGYDSVALK--- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L       +   +  P+L       KM K+L   I + + 
Sbjct: 181 -ADVELGGTDQKFNLLIGRHLQREFGQEEQTCIMMPILEGLDGVQKMSKSLGNYIGILEP 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEIT 307
              P   +     I D  +  + + +T +   EI+ M K   +      EAKK +A  I 
Sbjct: 240 ---PEEQFGKVMRISDELMWRYYRLVTRVSEEEIEEMEKAVREGKLHPMEAKKRLAETIV 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG + A KA       F      + +P            + L  L+ +AG   ST+E
Sbjct: 297 RTFHGEDAARKAREHFERVFSKRELPEEIPEPE--ISIPENPVWLPRLLKEAGLVKSTSE 354

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            RR +K   ++I+   I++E L+I            L  GK+      
Sbjct: 355 GRRQIKGGGVRIDGEKITDENLKID----VLKKEFILQVGKRRFARIK 398


>gi|255320689|ref|ZP_05361866.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|255302305|gb|EET81545.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SK82]
          Length = 404

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 178/419 (42%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 1   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKVKAGFDPTAPDLHLGHTVLINK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH    L+G  T++IGDP+ +  +R  +  +++ EN +  +      ++    
Sbjct: 61  LKVFQDLGHDVYFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILEP--- 117

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++ N  W  S    DL+ ++ S  +V RML  +    R   +Q ++  EF Y ++
Sbjct: 118 -NKTKVVFNSEWFASKTAADLI-QLASQQTVARMLERDDFTKRYSSQQPIAIHEFLYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 176 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYHQEPQVCITVPILEGLDGVQKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           K+L   I +     +P   +Q   ++ D+ +  + + L+   M EI       ++G+   
Sbjct: 232 KSLGNYIGVF---DAPGAMYQKVLSMPDSLIERYFELLSFKSMPEIQDLLKEMVEGRNPQ 288

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    HG E A  A   A          +  P ++IS+ E    + + +++
Sbjct: 289 EIKRILALELVERFHGSEAAANAHKGAGNIITEGELPEGTPEVTISRAEFGGEIFIASIL 348

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +  +A+  +   A+K++  ++ +    +K           +  GKK      
Sbjct: 349 RTAGLTKNAAQAKDAVARGAVKVDWEVV-DADFSVKE-----NKTYIIQAGKKAIAKVT 401


>gi|66047792|ref|YP_237633.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75500401|sp|Q4ZMM7|SYY_PSEU2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|63258499|gb|AAY39595.1| Tyrosyl-tRNA synthetase, class Ib [Pseudomonas syringae pv.
           syringae B728a]
          Length = 403

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 164/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EID  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEIDGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P +S++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPELSVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFV-----FKLGTTHVCQAGKKAFGRVTLV 397


>gi|255715553|ref|XP_002554058.1| KLTH0E13354p [Lachancea thermotolerans]
 gi|238935440|emb|CAR23621.1| KLTH0E13354p [Lachancea thermotolerans]
          Length = 463

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 135/438 (30%), Positives = 210/438 (47%), Gaps = 31/438 (7%)

Query: 6   SDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + L  L +RG + Q+S P  +    L S   +  Y G D TA SLH G+L  LM+L   
Sbjct: 31  KNVLQTLRDRGLLAQVSQPENVLRTKLESGEKLKLYCGADPTAESLHLGNLLPLMVLLHF 90

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK--- 120
              GH   +L+GG T I+GDPS R   R  +   + Q N+  I+G    F + G      
Sbjct: 91  YIKGHDVYTLVGGATGIVGDPSGRKTERTAIEETKRQSNVSNIQGQLQRFFENGLAYYKG 150

Query: 121 -------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                    A+  NN  W   +K +D L   G    V  MLS +SV SRL  +  + F E
Sbjct: 151 RYGHVSNGKAVHTNNYDWWHDMKMLDFLGRYGRHIRVQSMLSRDSVSSRLGSQDGIGFNE 210

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-FALTSPLLTTA 232
           F Y ILQAYDF  L + +   +Q+GG+DQWGNI  GIDL  R+ +    F LT PLLTT+
Sbjct: 211 FTYQILQAYDFYHLNQIHGVAVQVGGNDQWGNITAGIDLISRIGSKSQPFGLTVPLLTTS 270

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKL 290
           +G K GK+   A++++  M + ++ +Q++ +  D DV    +  T LP+ EI+      +
Sbjct: 271 TGEKFGKSAGNAVFIDPTMNTSFDMYQFFMHTTDEDVAKLLRIFTLLPLQEINAVVQTHM 330

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK------- 343
           +  +   A+K++  E+  +VHG      A   +   F    H   +P   + +       
Sbjct: 331 ESPKDRIAQKLLGREVVDLVHGSGRGNDAEMVSEILF--GNHQLQLPANELIRLFREARH 388

Query: 344 -DEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKI--NNSIISNEKLQIKLQDFDST 399
                RG+ L  L+V+  G   S +EARR LK  ++ +  + + + N+   +  Q +   
Sbjct: 389 LVSFPRGLSLEELLVRVTGC--SRSEARRKLKQGSVYLGSDKTRVLNDIESL-EQFYIDD 445

Query: 400 GNIKLSFGKKNHIICHLC 417
             + L  GK+   +  + 
Sbjct: 446 QVLILRIGKQKCFVIEIV 463


>gi|15807614|ref|NP_296353.1| tyrosyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|81550553|sp|Q9RR63|SYY_DEIRA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|6460463|gb|AAF12170.1|AE002092_8 tyrosyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 411

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 95/425 (22%), Positives = 167/425 (39%), Gaps = 23/425 (5%)

Query: 1   MPAFKSDF-LSI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ 56
           M   + +  ++    L +RG +  +S       +     +   +G D T   LH GH   
Sbjct: 3   MSEIRRNVPVNEQIQLLKRGVVDLVSEEDLKRKIEKGEPLRVKLGADPTRPDLHLGHAVI 62

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  +   Q  GHK I L+G  T+ IGDPS + ++R  +  +E + N E         ++ 
Sbjct: 63  LRKMRQFQDLGHKVIMLIGDFTATIGDPSGKSKTRPPLSLEEARANAESYLAQCRLILR- 121

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   +  N  WL  + Y   +  + + ++V R+L  +    RL     +S  E  Y
Sbjct: 122 -QEPEALEIRYNSEWLEQLGY-KDIIGLAAKYTVARILERDDFTKRLSAGTPISMHELLY 179

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT 235
            + Q YD V L       +++GG+DQ  N + G  L           LT PLL       
Sbjct: 180 PLTQGYDSVALH----ADVELGGTDQLFNNLVGRALQRDYGQEAQVVLTLPLLVGLDGTE 235

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KM K+L   I L      P+  +     + D  + ++   LT LP   I+ +        
Sbjct: 236 KMSKSLDNYIGLT---DEPHAMFAGLMKVPDPLLDNYFTLLTDLPRERIEELLAGHPVA- 291

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLL 353
             A + +A E+    H   + + A           I   ++P +S+   E++    + + 
Sbjct: 292 --AHRELAREVVRAFHPDADLDAAEARFRSVAKGGIP-DNIPAVSVPASELNEQGHVSMA 348

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V AG   S   AR+ +++  +K+     S+ + Q+  +       + +  GK     
Sbjct: 349 KLVVLAGLEPSNGAARKLIQNRGLKLGGETYSDPQGQLTREQLTEG--VVIQKGKDKFAR 406

Query: 414 CHLCG 418
             L G
Sbjct: 407 LVLEG 411


>gi|189346070|ref|YP_001942599.1| tyrosyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189340217|gb|ACD89620.1| tyrosyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 405

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 94/404 (23%), Positives = 164/404 (40%), Gaps = 25/404 (6%)

Query: 16  GFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
             +  IS       L     +   +   +G D +   LH GH   L  L   Q  GH+ I
Sbjct: 16  NVVEIISVDELEKKLLRSLQTGKPLKIKLGADPSRPDLHLGHSVVLKKLREFQDLGHEAI 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDPS + ++R  + ++E +EN +      S  +          +  N  W
Sbjct: 76  LIIGDFTAMIGDPSGKSKTRPQLSAEEARENGKSYFEQASKILD----AAKTTICYNADW 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + +   +  + S ++V RML  +    R +  + +S  EF Y + Q  D V L  + 
Sbjct: 132 LGKMSF-SDVIRLSSHYTVARMLERDDFERRYRSREPISIHEFLYPLAQGMDSVHLKND- 189

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL           +T  LL  T    KM K+L  AI  N  
Sbjct: 190 ---VELGGTDQKFNLLVGRDLQREYGIAPQVCITMELLVGTDGKEKMSKSLGNAICFN-- 244

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P + +    +I D  + ++ + L T     +  +         EAK+ +A +I    
Sbjct: 245 -DPPNDMYGKVLSIPDTLIETYHRLLVTGNKELLTTLRGHIADNPREAKRTLAKDIVAQY 303

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           +    A +A       F       ++  +   +      + +  L+V  G A S +EARR
Sbjct: 304 YSINAAREAEGHFDRIFVQKKAPDNIELVEFGQ----NSIAVTDLLVSLGAAPSKSEARR 359

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++ NA+ +N   I++    + L D        L  GK+     
Sbjct: 360 MIQQNAVTVNEEKITDTNALVPLDDEPK----ILKAGKRKFYKI 399


>gi|294666117|ref|ZP_06731375.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604131|gb|EFF47524.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 404

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 160/411 (38%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L S   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEILKLDQLQARLASGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLVNARTYEEQVFKILD----RERTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++      +V RML  +    R   +Q ++  EF Y ++Q YD V L    
Sbjct: 126 FGQMSAADMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I +N+ 
Sbjct: 182 -ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEINEAKKIIATEI 306
                +       I DA    +   L+        + +            E K  +A E+
Sbjct: 241 ---AIDIVTKTMKIGDALTWRWIDLLSFDISLAEAARLKEQVASGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +     + G+ L  L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRLAGLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVKIDGEVVEDPSRV-----FTQGFEGVIQVGKRNFARVSLV 401


>gi|241766103|ref|ZP_04764014.1| tyrosyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241363856|gb|EER59176.1| tyrosyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 410

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 179/411 (43%), Gaps = 30/411 (7%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L     +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EISLRGADELLPQDEWIKKLARSETTGQPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS+IGDPS R+ +R  +  ++I+ N E      S  +          + 
Sbjct: 80  GHQVIFLIGDFTSLIGDPSGRNSTRPPLTPEQIKFNAETYYRQASMVLDPA----RTEIR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + F+V RM+       R K    ++  EF Y ++Q YD V 
Sbjct: 136 YNSEW-SEPLGATGMIQLAAKFTVARMMERNDFHDRFKAGNPIAVHEFLYPLMQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +         LT PLL    G  KM K+ +  I
Sbjct: 195 LK----SDLELGGTDQKFNLLMGRHLQQEYGQEPQCILTMPLLEGLDGIEKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            ++++  + Y       +I D  +  +   L+   ++EI+  +     G+   +AK ++A
Sbjct: 251 GISEDANTMYAKV---LSISDTLMWRWYTLLSFKSLAEIEVLKAEVAGGRNPKDAKVLLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    AE A    +           +P +++S       +G+  L+ +A  A 
Sbjct: 308 KEITARFHSAAAAEAAEQDFIN-RSKGGVPDEIPEVTLS----GAPLGIGALLKQANLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ST+EA R ++   ++++ S++S++ L+++       G   +  GK+     
Sbjct: 363 STSEANRLIEGGGVRVDGSVVSDKGLKLEA------GTYVVQVGKRKFARV 407


>gi|218288874|ref|ZP_03493125.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240963|gb|EED08140.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 413

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 176/413 (42%), Gaps = 31/413 (7%)

Query: 12  LSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +  RG   +I    EL         +   +   +G D T+S +H GH   L  L   Q  
Sbjct: 21  IIRRGT-AEIVPEDELVQKLRESVRTGRPLRVKLGIDPTSSDIHLGHTVVLHKLRQFQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   ++G  T  IGDP+ + E+R+ + ++E+ EN +         +          ++
Sbjct: 80  GHQVFLVIGSFTGQIGDPTDKAETRKQLSAEEVAENAKTYVAQLYKILDP----EKTQVV 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + +  ++  + S  +V RML  E  + R +  + +   EF Y ++QAYD V 
Sbjct: 136 YNGDWLAPLDFAQVI-RLASTITVARMLEREDFQKRFQDNRPIHVHEFFYPLMQAYDSVH 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G  L      P   A+  PLL       KM K+L   I
Sbjct: 195 LR----ADVELGGTDQKFNLLMGRHLQREFGQPMQVAVMLPLLEGLDGVNKMSKSLGNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKII 302
            +N+    P N +    ++ D+ +  + + L+  P  EI+ M +          +AK  +
Sbjct: 251 GVNE---EPNNMFGKLMSVPDSLLFKYYELLSLRPQDEIEAMRREVEAGRMNPRDAKMQL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+     G E   +A       F        +P   ++         ++  +V  G A
Sbjct: 308 AEELVERFLGPEARREAVEHWRTVFQKGGLPDDIPERRVA----GEAQWIVKWLVDLGLA 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S ++ARR ++  A+++N + +++   Q + QD D      L  GK+  +   
Sbjct: 364 QSNSDARRAIQEGAVRLNGNKVTDTDFQYRPQDGD-----VLQRGKRQFVRLR 411


>gi|21244616|ref|NP_644198.1| tyrosyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|81798740|sp|Q8PFT1|SYY_XANAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21110298|gb|AAM38734.1| tyrosyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 403

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 97/422 (22%), Positives = 162/422 (38%), Gaps = 26/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +      L  RG    +   +    L +   +    G+D TA  LH GH   L  +
Sbjct: 1   MTTIEESL--ALIGRGTEEILKLDQLQARLATGKPLRVKAGFDPTAPDLHLGHTVLLNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +
Sbjct: 59  RQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILD----R 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W   +   D+++      +V RML  +    R   +Q ++  EF Y ++Q
Sbjct: 115 ERTEVRFNSEWFGQMSAADMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G  L E         LT PLL       KM K
Sbjct: 174 GYDSVALK----ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEI 295
           +L   I +N+      +       I DA    +   L+        + +           
Sbjct: 230 SLGNYIGINEP---AIDIVTKTMKIGDALTWRWIDLLSFDISMAEAARLKEEVASGELHP 286

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E K  +A E+ T  H    AE+A             +  +P   +     + G+ L  L
Sbjct: 287 REVKLRLARELATRFHDAATAEQAIAGWHAVVTGQGDTGLLPLQEVVVP--AEGLRLAGL 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  AG   S +EA R LK  A+KI+  ++ +         F       +  GK+N     
Sbjct: 345 LTAAGLTPSNSEATRKLKERAVKIDGEVVEDPGRV-----FTQGFEGVIQVGKRNFARVS 399

Query: 416 LC 417
           L 
Sbjct: 400 LV 401


>gi|330868552|gb|EGH03261.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 398

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 167/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAATE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|289623555|ref|ZP_06456509.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650839|ref|ZP_06482182.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 403

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 167/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAATE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|303228359|ref|ZP_07315193.1| tyrosine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516972|gb|EFL58880.1| tyrosine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 402

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 172/407 (42%), Gaps = 30/407 (7%)

Query: 18  IHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  I N  +L       +     +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VSGIINEEDLVKKIERSIKENKPLIVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDP----EKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR   S+ +V RM+  +    R K  + +   EF Y ++Q  D V L     
Sbjct: 131 ESMNFADVLRLASSY-TVARMMERDDFDKRYKEGRPIGVHEFMYPLMQGQDSVALH---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L +         +T PLL       KM K+L   I +++  
Sbjct: 186 ADVEFGGTDQTFNLLMGRHLQDLAGQEPQVVITMPLLEGLDGVQKMSKSLGNYIGIDEV- 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P + +    +I D  ++ +   +T + + + D M +          +AK  +A  I  
Sbjct: 245 --PKDMYGKAMSIPDELMMRYFMLVTDMSIEDQDDMEERLENGTLHPRDAKMQLAKTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG + A++A       F        +P  +I K   S  + +      AG   S  EA
Sbjct: 303 LYHGEQAAQEAEDEFKRVFQQHALPTDIPEYAIDKP--SEAIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K+ A K+N      E L ++         + +  GK+  +   
Sbjct: 361 RRSIKAGAFKVNGEKYGEENLVLEDG-------MIVQVGKRKFVKIK 400


>gi|330878330|gb|EGH12479.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 403

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 102/409 (24%), Positives = 168/409 (41%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI   R     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEISGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAATAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +    +KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFMVKL-----GATHVCQAGKKAFGRITLV 397


>gi|190572485|ref|YP_001970330.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190010407|emb|CAQ44015.1| putative tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 403

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 95/422 (22%), Positives = 163/422 (38%), Gaps = 26/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +     I   RG    +        L     +    G+D TA  LH GH   L  +
Sbjct: 1   MSSIEEALAQI--GRGADEILKLEDLRARLQEGRPLRIKAGFDPTAPDLHLGHTVLLNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T +IGDPS +  +R+ +  +++  N    +      +     +
Sbjct: 59  RQFQDLGHQVIFLIGDFTGMIGDPSGKSLTRKPLSREDVLANARTYEEQVFKVLD----R 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   +  N  W   +   D++R  G   +V RML  +    R   +QS++  EF Y ++Q
Sbjct: 115 SRTEVRFNSEWFGKMGAADMIRLAGQH-TVARMLERDDFAKRYAAQQSIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G  L E         LT PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRGLQEHHGQKPQVVLTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEI 295
           +L   I +++      +       +DD  +  + + L+                  G   
Sbjct: 230 SLGNYIGISEP---AIDIVTKTMKVDDTLMWRWIELLSFDISQAEAVQLREQVANGGLNP 286

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
              K  +A E+ T  H    AE+A                +P   ++      G+ +  L
Sbjct: 287 RVVKLRLARELATRFHDAAAAEQAIAGWEAAVTGQGDITQLPLQDVAIPV--EGLRIAAL 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  AG   S +EA R LK  A+K++  ++ + +  ++           L  GK+      
Sbjct: 345 LTAAGLTPSNSEANRKLKERAVKVDGEVVEDGQQVLQP-----GFEGLLQVGKRTFARVR 399

Query: 416 LC 417
           L 
Sbjct: 400 LV 401


>gi|91092398|ref|XP_968995.1| PREDICTED: similar to tyrosyl-tRNA synthetase [Tribolium castaneum]
          Length = 457

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 128/433 (29%), Positives = 210/433 (48%), Gaps = 25/433 (5%)

Query: 7   DFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + L  L ERG    I   +    +  L +      Y G+D TA SLH G+L  L+ L   
Sbjct: 23  NLLK-LKERGMYQDIFPDTATNTVTDLLNAAPQRVYAGFDPTADSLHIGNLLVLINLIHW 81

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
           Q+ GH+PI+L+GG T+ IGDPS +   R  + S  + EN+  I+    +          K
Sbjct: 82  QRGGHQPIALIGGATAKIGDPSGKTSEREKLASAFVDENVIGIRNNIETLFYNHEKYLWK 141

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                   +++NNE+W   +  IDL+   G +  +  +LS  SV++RL+    +SF EF+
Sbjct: 142 KKGKLAPLIIVNNESWYSKMSPIDLIGGAGRYLRMGTLLSRTSVQTRLQSPAGMSFTEFS 201

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y + QAYD++ L + Y+C  Q+GG+DQ GNI+ G +L  +    +++ALT P++TT  G 
Sbjct: 202 YQLFQAYDWLHLFQKYNCSFQIGGNDQMGNIMSGHELISKTCDKQVYALTVPIITTEMGD 261

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+ E TSP+  +Q++    D +V    K  T  P+  I  + +   ++ 
Sbjct: 262 KFGKSAGNAMWLSAEKTSPFTLYQFFVRQVDTEVEKMLKFFTFEPVGSIKDLMRRHTEKP 321

Query: 296 --NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISIS---------K 343
                +K +A ++  +VHG +  E A  A    ++ SI +   M  + I          +
Sbjct: 322 ELRLPQKYLAEQVVLLVHGEKGLEAAHKATKVLYERSITALAEMNPLEIKSLFEGATVVE 381

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNI 402
                G  +L L + AG   +  +A R + +    IN+   +N    + L     S    
Sbjct: 382 ILPEPGQSVLDLAMSAGCFLTKEDALRIISAGGFYINHQKTNNPNEVLNLNVHRLSNNVT 441

Query: 403 KLSFGKKNHIICH 415
            L  GKKN+ +  
Sbjct: 442 LLRVGKKNYYVVK 454


>gi|117925622|ref|YP_866239.1| tyrosyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117609378|gb|ABK44833.1| tyrosyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 404

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 177/413 (42%), Gaps = 27/413 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           + +RG +  +S  +    L     S   +    G+D TA  LH GH   L  L   Q+ G
Sbjct: 10  IIQRGIVDLVSAEQLEQKLTRSLASGVPLRIKAGFDPTAPDLHLGHTVLLHKLRQFQELG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T+ IGDP+ + E+R+ +   ++  N E  K      +          ++ 
Sbjct: 70  HQVLFLIGDFTAQIGDPTGKSETRKSLTPADVASNAETYKEQVFKLLD----AQRTEVVF 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  ++  D+++ + + F+V RML  +    R K  + ++  EF Y ++Q YD V L
Sbjct: 126 NSSWMGQLRASDMIK-LAAQFTVARMLERDDFSKRYKEGRPIAIHEFLYPLVQGYDSVAL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  +++GG+DQ  N++ G +L +         +T P+L       KM K+L+  I 
Sbjct: 185 ----EADVELGGTDQLFNLLVGRELQKDAGQEPQCVITLPILEGLDGVNKMSKSLNNYIG 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIA 303
           + +        +    +I D  +  + + L+   M++I  +            EAKK +A
Sbjct: 241 VKEP---AREIFGKCMSISDDLMWRYYELLSDQEMAQITHLRGEVEAGRYHPMEAKKALA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+    HG E A  A       F        +P +++  +     +GL  L+ +AG   
Sbjct: 298 AELVERFHGAEAAVAARAEFEGMFKKGDLPDDVPELTVKAE--GANLGLAALLCQAGLVK 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  E  R +  NA+ +    +S+ + ++            +  GK+      +
Sbjct: 356 SNGEGMRMISQNAVSVEREKVSDGRYELAR-----GSRSLIQVGKRRFAYVTV 403


>gi|86742625|ref|YP_483025.1| tyrosyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86569487|gb|ABD13296.1| tyrosyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 428

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 131/417 (31%), Positives = 209/417 (50%), Gaps = 16/417 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG +H  ++P EL      G    YIG+D TA SL  G+L  + LL    + G
Sbjct: 5   LLDELSWRGLLHDSTDPAELREHLDSGRRRCYIGFDPTAPSLTIGNLLPMTLLIRAARAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALML 126
              ++L GGGT +IGDPS +   R ++ +QE++ N+   + I  S              +
Sbjct: 65  IGAVTLFGGGTGLIGDPSGKSVERSLLTAQEVRTNMLGQQEIMESVFARALDSGQLPQFV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           +N  WL  +  I+ LR++G  F V  M+  +SVR RL      L++ EF+Y +LQAYDF 
Sbjct: 125 DNADWLDGLGMIEFLRDVGKHFPVTEMVRRDSVRRRLDDPDVGLTYTEFSYSLLQAYDFR 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +++   LQMG SDQWGNI+ GID   R+   ++  LT PLL  + GTK GK+  GA+
Sbjct: 185 RLCEDHGVTLQMGASDQWGNIVAGIDYVRRVLRTQVHGLTCPLLLRSDGTKFGKSEKGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+ + TSPY  +Q+  N+ D +   FA   + +    ++R      +       ++ +A
Sbjct: 245 WLSADRTSPYTLYQFVINLSDDEARRFALFFSLIDREPLERLFAEHAEAPGKRALQRHLA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS-RGMGL 352
            EIT +VHG+   + A  A+   F            S     +PT+      +   G  +
Sbjct: 305 REITALVHGQAAVDAAEAASAALFSGDVKAIGADLLSDVFADVPTVEEPAARLEDDGWPV 364

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + L++  G A+S  +AR HL ++A+ +N   +   +  +  +D      I +  G++
Sbjct: 365 VDLLIATGLASSKRDAREHLGNHAVLVNGERVG-VEATVGTKDLLHGSVILVRRGRR 420


>gi|229592920|ref|YP_002875039.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229364786|emb|CAY52795.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 399

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 165/408 (40%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEELLVEAELIEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKTQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQMGPADFIRLTSQYTVARMLERDDFDKRYSTNQPIAIHEFLYPLVQGYDSVALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
              P   +    +I DA +  + + L+   M EI+  R     G    + K  +A EI  
Sbjct: 241 ---PGVMYGKLVSIPDALMWRYFELLSFRSMDEINALRADVEAGANPRDVKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA            +P I +S  E    M +  ++ KAG   ++  A
Sbjct: 298 RFHGDEAAANAHRAAGNRMKDGELPDDLPEIELSAAEA---MPIAAVLNKAGLVKNSAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++ +     +L             GKK      L
Sbjct: 355 RDLLGSGGVRVDGEVV-DRTFICEL-----GSTHVCQAGKKAFARITL 396


>gi|254524608|ref|ZP_05136663.1| tyrosyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722199|gb|EED40724.1| tyrosyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 403

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 95/422 (22%), Positives = 164/422 (38%), Gaps = 26/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +      L  RG    +        L     +    G+D TA  LH GH   L  +
Sbjct: 1   MSSIEEAL--ALIGRGADEILKLEDLRARLQEGRPLRIKAGFDPTAPDLHLGHTVLLNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T +IGDPS +  +R+ +  +++  N    +      +     +
Sbjct: 59  RQFQDLGHQVIFLIGDFTGMIGDPSGKSLTRKPLSREDVLANARTYEEQVFKVLD----R 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   +  N  W   +   D++R  G   +V RML  +    R   +QS++  EF Y ++Q
Sbjct: 115 SRTEVRFNSEWFGKMGAADMIRLAGQH-TVARMLERDDFAKRYAAQQSIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G  L E         LT PLL       KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRGLQEHHGQKPQVVLTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK----EI 295
           +L   I +++      +       +DD  +  + + L+           + Q        
Sbjct: 230 SLGNYIGISEP---AIDIVTKTMKVDDTLMWRWIELLSFDISQAEAVQLREQVATGGLNP 286

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
              K  +A E+ T  H    AE+A                +P   ++    + G+ +  L
Sbjct: 287 RVVKLRLARELATRFHDAAAAEQAIAGWEAAVTGQGDITQLPLQDVAIP--AEGLRIAAL 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  AG   S +EA R LK  A+K++  ++ + +  +            L  GK+      
Sbjct: 345 LTAAGLTPSNSEANRKLKERAVKVDGDVVEDGQQVL-----LPGFEGLLQVGKRTFARVR 399

Query: 416 LC 417
           L 
Sbjct: 400 LV 401


>gi|146328884|ref|YP_001210187.1| tyrosyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146232354|gb|ABQ13332.1| tyrosyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 400

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 93/392 (23%), Positives = 171/392 (43%), Gaps = 23/392 (5%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L +   +   +G D TA  LH GH   L  L  +Q  GH+ + L+G  T+ IGDPS ++
Sbjct: 29  KLKAGKTLRVKLGMDPTAPDLHFGHTVVLNKLRQIQDLGHQVVFLVGDFTAQIGDPSGKN 88

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            +R  +  +++ EN +  +      +     +    +  N  W+  +   D++     + 
Sbjct: 89  STRPPLSKEQVLENAKTYQEQVFKILD----REKTEIRFNSEWMDKMTASDMVHLTAKY- 143

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V R+L  +  + R    Q ++  EF Y + QAYD V L    +  +++GG+DQ  N++ 
Sbjct: 144 TVARILERDDFQKRYHNHQPIAVHEFLYSLTQAYDSVAL----EADIELGGTDQKFNLLV 199

Query: 209 GIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G D+           LT P+L       KM K+L   I + +     +       +I D 
Sbjct: 200 GRDIQREYGLSPQAILTMPILEGLDGVQKMSKSLGNYIGIFEPAAEMF---GKIMSISDE 256

Query: 268 DVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            +  + + L+   ++EID  + +   G    + K  +A E+    H    A  A  A ++
Sbjct: 257 LMWRYFELLSMRSLAEIDALKASVASGANPRDIKFELALELVARFHDDASARAAQEAFVQ 316

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F  +     +  ++I+  E    + +  L+  AG  +ST+E  R +K  A+KI+   I 
Sbjct: 317 RFAKNEIPDDLEELTITASE---PLPIANLLKDAGLVSSTSEGLRMIKQGAVKIDGQRID 373

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++ LQ     F +  +  +  GK+      L 
Sbjct: 374 DKNLQ-----FSAGFSGVIQVGKRRMAKVSLA 400


>gi|332530284|ref|ZP_08406230.1| tyrosyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040270|gb|EGI76650.1| tyrosyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 415

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 101/410 (24%), Positives = 174/410 (42%), Gaps = 27/410 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I     +  L         +   +G D TA  +H GH   L  L  LQ  GH+ 
Sbjct: 25  RGCEELIPEDDWVKKLSRSEATHTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHQV 84

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  + S++I+ N E      S  +          +  N  
Sbjct: 85  IFLIGDFTSLIGDPSGRNSTRPPLTSEQIKANAETYYKQASLVLDPQ----RTEIRYNSE 140

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  + ++ ++ + ++V RM+  +    R +    +S  EF Y ++Q YD V L   
Sbjct: 141 WCLPLGSMGMI-QLAAKYTVARMMERDDFTKRYQAGTPISVHEFLYPLMQGYDSVALK-- 197

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L +         LT PLL       KM K+    I +++
Sbjct: 198 --SDLELGGTDQKFNLLMGRHLQQEHGQEPQCILTMPLLVGLDGVDKMSKSKHNYIGISE 255

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           +  + Y       +I D  +  +   L+   ++EI  + K      N  +AK  +A EIT
Sbjct: 256 DANTMYAKV---LSISDVLMWDWYTLLSFKSLAEIAALKKEVEAGRNPKDAKVALAKEIT 312

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  HG   AE A    +           +   +++  E    +G+  L+ +AG   S+ E
Sbjct: 313 TRFHGAAAAEAAEQDFIN-RSKGGIPDEVEEQTLAL-EGGAPVGIAALLKQAGLVASSGE 370

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             R +    ++++ + +S++ L++        G   L  GK+      L 
Sbjct: 371 GNRLIDGGGVRVDGNTVSDKGLKLGA------GVYVLQVGKRKFKKVTLS 414


>gi|221632775|ref|YP_002521997.1| tyrosyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155495|gb|ACM04622.1| tyrosyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 405

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 26/411 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+ +L  RG +  +        L  +  +   +G D T   +H GH      L   Q  G
Sbjct: 10  FVDLLLSRGTVDVVVREHLRARLLGEQPLRVKLGVDPTRPDIHLGHYVCFRKLRQFQALG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T+ IGDPS R   R M+ ++E++ N E     F   +      T A ++ 
Sbjct: 70  HQVVVIIGDWTARIGDPSGRSSQRPMLTAEEVRANAETYLEQFFKVVD----VTKAEIVW 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             TW  +    + +  + S ++V ++L+ E    R +    +S  E  Y +LQAYD V +
Sbjct: 126 QSTWFGNFTL-EDVIRLASKYTVAKLLTREDFAKRYEEGSPISITELLYPLLQAYDSVAI 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G D+           LT PLL  T    KM K+    I 
Sbjct: 185 Q----ADVEIGGTDQLFNLLVGRDIMREYGLEPQDILTVPLLVGTDGHLKMSKSYGNYIA 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIA 303
           +N     P   +    +I D  +  + + LT +P  EIDRM            +AK+ +A
Sbjct: 241 VN---DPPEEMFGKIMSIPDHVLGDYFRLLTDIPDEEIDRMIVEMRAGRLNPRDAKEHLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             I + +H  E AE+A         +    + +P + +          +L  +V AGFA 
Sbjct: 298 FVIVSDLHSPEAAEQAREHFHRVHRLREIPEQIPEVPVPGR-----ARVLDYVVLAGFAR 352

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S NEARR ++   ++++   + + +  ++LQ+      + L  GK+     
Sbjct: 353 SNNEARRLVQQGGVRLDGRRLDDPEEMLELQE-----PVVLQVGKRRFARL 398


>gi|71737953|ref|YP_272986.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|115305817|sp|Q48NN3|SYY_PSE14 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71558506|gb|AAZ37717.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 403

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 167/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|78189128|ref|YP_379466.1| tyrosyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|115305801|sp|Q3ARF2|SYY_CHLCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78171327|gb|ABB28423.1| tyrosyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 402

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 93/410 (22%), Positives = 171/410 (41%), Gaps = 25/410 (6%)

Query: 11  ILSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  R  +  IS       L S       +   +G D +   LH GH   L  L   Q  
Sbjct: 11  DLITRNTVEIISVDELEQKLVSSQKSGKPLNIKLGADPSRPDLHLGHSVVLRKLRDFQDL 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I ++G  T++IGDPS + ++R  + ++E  EN           +       +  + 
Sbjct: 71  GHHAILIIGNFTAMIGDPSGKSKTRPQLSAEEAAENGRSYFEQAIKILD----AANTTLC 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL ++ + D++  + S ++V RML       R + ++ +S  EF Y + Q  D V 
Sbjct: 127 SNADWLGAMTFADVI-RLSSHYTVARMLERNDFEQRYRAQEPISIHEFLYPLAQGMDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G DL           +T PLL  T    KM K+L  AI
Sbjct: 186 LKND----VELGGTDQKFNLLVGRDLQREYGIAPQVCITMPLLVGTDGKDKMSKSLDNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
                  +P + +    +I D  + ++++ L +   + ++ +          AK+ +A  
Sbjct: 242 SFT---DTPNDMYGRALSIPDTLIETYSRLLLSQFGAALNEILSQIETNPRLAKRAMARH 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    +  E A  A     + F       ++  + +     +  M ++ L+   G A S 
Sbjct: 299 IVADYYSPEAASAAEEHFDKLFVHKQAPDNLELLELE----ATSMPIIDLLTLLGAAPSK 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +EARR +++ ++ I++  I +    I L+         +  GK+      
Sbjct: 355 SEARRMIQAKSVSIDDEKIEDFNAVIALE----GEAKIVRAGKRKFFKIR 400


>gi|91789945|ref|YP_550897.1| tyrosyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91699170|gb|ABE45999.1| tyrosyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 414

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 175/409 (42%), Gaps = 26/409 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I     +  L         +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 24  RGCDELIPQDEWVKKLVRSESTGVPLRIKLGLDPTAPDIHVGHTVVLNKMRQLQDLGHSV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  +  ++I+ N +      S  +          +  N  
Sbjct: 84  IFLIGDFTTMIGDPSGRNSTRPPLTREQIEVNAQTYYRQASLVLDPA----RTEIRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W         + ++ S ++V RM+       R K  QS+S  EF Y ++Q YD V L   
Sbjct: 140 W-SDPLGARGMIQLASRYTVARMMERNDFHDRFKAGQSISVHEFLYPLMQGYDSVALK-- 196

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL    G  KM K+ +  I +++
Sbjct: 197 --SDLELGGTDQKFNLLMGRHLQVEYGQDPQCVLTMPLLEGLDGIEKMSKSKNNYIGISE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           +  + +       +I D  +  +   L+    +EI   R   L G+   +AK  +A EIT
Sbjct: 255 DANTMFAKV---LSISDVLMWRWYTLLSFRSEAEIAALRAEVLAGRNPKDAKVALAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A    +           +P ++++  E    +G+  L+ +AG A S +E
Sbjct: 312 ARFHSAAAADAAEQDFIN-RSKGGVPDEIPEVALTLAEGGAPLGIGALLRQAGLAPSGSE 370

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A R +    +++++S++S++ L++        G   L  GK+      L
Sbjct: 371 ANRLIDGGGVRVDSSVVSDKALKLGA------GTYVLQVGKRKFARVTL 413


>gi|73748441|ref|YP_307680.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|147669221|ref|YP_001214039.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|115305804|sp|Q3ZX03|SYY_DEHSC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|73660157|emb|CAI82764.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|146270169|gb|ABQ17161.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 396

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 99/415 (23%), Positives = 181/415 (43%), Gaps = 27/415 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    IL  RG    I       +L S   +    G+D ++  +H GH+  L  L
Sbjct: 1   MNQSENQIDQILK-RGVAEVIVEEDFKKLLLSGRKLRLKEGFDPSSPDIHLGHMVALRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++ N +     F   +      
Sbjct: 60  RQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVKANAKTYLEQFFKIVDKD--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +     W  + K  + +  + S F+V +ML+ +    R    + +S  E  Y +LQ
Sbjct: 117 -KTEVRWQSEWYGNFKL-EDVVRLSSKFTVAQMLARDDFAKRYAAGKPISVTELLYPMLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGK 239
           AYD V +       ++ GG+DQ  N++ G +L E +       L  P+L  T    KM K
Sbjct: 175 AYDSVMVK----SDVEFGGTDQKFNLLVGRELQEMVGQKPQQVLMVPILVGTDGVHKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEIN 296
           +L   I + ++   P   +    +I D  ++ + + +T +P  E        +       
Sbjct: 231 SLGNYIGVAED---PSEIFGKCMSIPDELILQYFELVTDIPDQEIADFKAQMENGQVNPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             KK +A+E+ T ++    A++A              + MP   +   E  +  G++  I
Sbjct: 288 ILKKRLASELLTQLYNATAAQEADARFTRVVQRGEIPEDMPECRL---ENGQNTGVIDFI 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           + +G A S +EARR L+  A++IN+  IS++   +K  D        +  GK+ +
Sbjct: 345 ILSGLAKSKSEARRLLEQGAVEINSEKISDQNTPVKCGD-------IIKAGKRRY 392


>gi|289432488|ref|YP_003462361.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946208|gb|ADC73905.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 396

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 99/415 (23%), Positives = 181/415 (43%), Gaps = 27/415 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     IL  RG    I       +L S   +    G+D ++  +H GH+  L  L
Sbjct: 1   MNQSEKQIDQILK-RGVAEVIVEEDFKKLLLSGRKLRLKEGFDPSSPDIHLGHMVALRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++ N +     F   +      
Sbjct: 60  RQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVKANAKTYLEQFFKIVDKD--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +     W  + K  + +  + S F+V +ML+ +    R    + +S  E  Y +LQ
Sbjct: 117 -KTEVRWQSEWYGNFKL-EDVVRLSSKFTVAQMLARDDFAKRYAAGKPISVTELLYPMLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGK 239
           AYD V +       ++ GG+DQ  N++ G +L E +       L  P+L  T    KM K
Sbjct: 175 AYDSVMVK----SDVEFGGTDQKFNLLVGRELQEMVGQKPQQVLMVPILVGTDGVHKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEIN 296
           +L   I + ++   P + +    +I D  ++ + + +T +P  E        +       
Sbjct: 231 SLGNYIGVAED---PSDIFGKCMSIPDELILQYFELVTDIPDQEIADFKAQMENGQVNPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             KK +A+E+ T ++    A++A              + MP   +   E  +  G++  I
Sbjct: 288 ILKKRLASELITQLYNATAAQEADARFTRVVQRGEIPEDMPECRL---ENGQNTGVIDFI 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           + +G A S +EARR L+  A++IN+  IS++   +K  D        +  GK+ +
Sbjct: 345 ILSGLAKSKSEARRLLEQGAVEINSEKISDQNTPVKCGD-------IIKAGKRRY 392


>gi|330985735|gb|EGH83838.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331011598|gb|EGH91654.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 398

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 164/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DRLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|257483168|ref|ZP_05637209.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 403

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 164/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DRLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|169836866|ref|ZP_02870054.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 407

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 104/414 (25%), Positives = 180/414 (43%), Gaps = 32/414 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +  RG    I N  E      +       +   +G D T S LH GH   L  L   Q  
Sbjct: 16  ILSRGCDE-IINENEFKKKLEKSISTNTPLRVKLGIDPTGSDLHLGHAVPLRKLKQFQDL 74

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH    L+G  T  IGDP+ + E+R+M+  +++ ENI+         +          ++
Sbjct: 75  GHDVFFLIGTFTGRIGDPTGKSETRKMLSEEQVMENIKTYLDQVKLILDLD----KINVV 130

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +        + S F+V++M+S E    RL   + +S +EF Y ILQ YD VE
Sbjct: 131 YNADWLEKLSL-SDALNLLSQFTVSQMISREDFSKRLSENKPVSLIEFMYPILQGYDSVE 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++G ++Q  N++ G DL +     +   +  P+L       KM K+L   I
Sbjct: 190 LH----ADVELGATEQKFNLLRGRDLQKNFGQEQQICMIMPILVGLDGVEKMSKSLGNYI 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            +     +P + +    +I D  + ++   +T +P  +I+ +            EAKK +
Sbjct: 246 GVK---DTPNDMFGKVMSISDELMENYYTMITDVPFEKIEEIKAQIADGSLHPMEAKKQL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAGF 361
             E+  + +G E A++A       F     +  +P + +   EV    G++ L+V + G 
Sbjct: 303 GAEVVKIYYGEEAAKEARDWFENVFSKRNLNVDLPEVELEYKEV----GIIDLLVKETGL 358

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             +T+EARR ++    KIN+  I + K  + L+       + +  GKK  +   
Sbjct: 359 MKTTSEARRLIQQGGFKINDEPIKDVKATVVLE-----SGMIVRAGKKKIVKVK 407


>gi|330980904|gb|EGH79007.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 399

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 164/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EID  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEIDGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFV-----FKLGPTHVCQAGKKAFGRVMLV 397


>gi|260222308|emb|CBA31742.1| Tyrosyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 442

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 166/410 (40%), Gaps = 26/410 (6%)

Query: 15  RGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 52  RGVEELLPQDEWVKKLAKSEATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHTV 111

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  + +++I+ N E      S  +          +  N  
Sbjct: 112 IFLIGDFTSMIGDPSGRNSTRPPLTAEQIKVNAETYYRQASLVLDPA----KTEIRYNSE 167

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W         + ++ S ++V RM+       R K    ++  EF Y ++Q YD V L   
Sbjct: 168 W-SDPLGARGMIQLASRYTVARMMERNDFHDRFKAGTPIAVHEFLYPLMQGYDSVAL--- 223

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +  L++GG+DQ  N++ G  L           LT PLL       KM K+ +  I +++
Sbjct: 224 -ESDLELGGTDQKFNLLMGRTLQAEYGQEPQCILTMPLLEGLDGVEKMSKSKNNYIGISE 282

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
               P   +    +I D  +  +   L+    +EI  +        N  +AK  +A EIT
Sbjct: 283 ---EPNTMFAKVLSISDVLMWKWYTLLSFKSEAEIAALKAEVEGGRNPKDAKVALAKEIT 339

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A    +           +  I++   E    +G+  L+  A  A S+ E
Sbjct: 340 ARFHSAAAADAAEQDFIN-RSKGGIPDQIDEITLPLGEGGAAVGIAALLKSANLAASSGE 398

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             R +    ++++++++S++ L++        G   L  GK+      L 
Sbjct: 399 GNRLIDGGGVRVDSNVVSDKGLKLGA------GTYVLQVGKRKFARVTLA 442


>gi|315018872|gb|ADT70675.1| TyrS [Enterococcus faecium]
          Length = 383

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 135/387 (34%), Positives = 197/387 (50%), Gaps = 15/387 (3%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T  S+H GHL   M++   Q  GH P  L+GGGT  IGDPS R   R +   +++Q
Sbjct: 1   GVDPTGDSMHIGHLIPFMMMKRFQLAGHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQ 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N++ +              T    +NN  WL  I  ++ LR+ G  F++N ML+ + V 
Sbjct: 61  HNVDALSNQMRKLFGKDANIT---FVNNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVA 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKT 218
           SRL  E  +SF EF Y ILQ+ DF+ L K YD +LQ+GG+DQWGNI  G+DL  +     
Sbjct: 118 SRL--EVGISFTEFTYQILQSIDFLHLHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPE 175

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
            + F LT PL+  A GTK GKT  GA+WL+ + TSP+ F+Q+W N DD DVV + K  T 
Sbjct: 176 AEAFGLTIPLMLKADGTKFGKTAGGAVWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTF 235

Query: 279 LPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           L   EI+          E  EA++ +A E+T  VH  E+ ++A       F  +I   + 
Sbjct: 236 LSQEEIEDLAKKVETEPEKREAQRRLAEEVTRFVHSEEDLKEAQKITQALFSGNIKELNA 295

Query: 337 PTI-----SISKDEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             I      +   E+S     ++ L+V      S  +AR  + + AI IN   +++    
Sbjct: 296 EEIAQGFGKMPNVEISSTPENIVELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFV 355

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHLC 417
           I   D      + +  GKKN+ +  + 
Sbjct: 356 INPSDEFDGKFVVIRKGKKNYFLAKVI 382


>gi|193216002|ref|YP_001997201.1| tyrosyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193089479|gb|ACF14754.1| tyrosyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 402

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 172/410 (41%), Gaps = 25/410 (6%)

Query: 11  ILSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  +  +  IS     +     L +Q  +   +G D +   LH GH   L  L   Q  
Sbjct: 11  DLISKNTVEIISTTELEEKIQHSLKTQTPLKVKLGADPSRPDLHIGHAVVLKKLRDFQDL 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I L+G  T+ IGDPS + ++R  +  +E + N +      +  +         ++ 
Sbjct: 71  GHTAILLIGDFTAQIGDPSGKSKTRPQLTHEETRINGQSYFEQAAKILD----TEKTIIT 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL ++ + D++  + S ++V RML  +    R K+ + ++  EF Y + QA D V 
Sbjct: 127 HNADWLGTMTFADVI-RLTSHYTVARMLERDDFEKRYKQGEPIAIHEFLYPLAQAMDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G DL           +T P+L  T    KM K+L  AI
Sbjct: 186 LQND----VELGGTDQKFNLLVGRDLQREYGQAPQVCITLPILEGTDGVQKMSKSLGNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
                  SP + +    +I D  + ++ K  T     +++       +   +AK+ +A E
Sbjct: 242 SFT---DSPADMFGRVLSIPDILIENYFKLATRFSDEKLEEALLEAKENPRDAKRRLARE 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I  + H   +A+KA       F        +  + +     +    L+  +V  G   S 
Sbjct: 299 IVAIYHSETDAQKAQDDFDRIFIRKEAPSDVTEVHLE----AGAHSLIDALVIIGATASK 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            EARR +    + I+N  I + K Q+ + +        +  GK+      
Sbjct: 355 GEARRLMTQGGVSIDNEKIEDAKYQLTVSNEAK----LVKVGKRKFYKVT 400


>gi|313893604|ref|ZP_07827173.1| tyrosine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441875|gb|EFR60298.1| tyrosine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 402

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 174/407 (42%), Gaps = 30/407 (7%)

Query: 18  IHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L       +     +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVIKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDP----EKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR   S+ +V RM+  +    R K  + +   EF Y ++Q +D V L     
Sbjct: 131 ESMNFADVLRLASSY-TVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALQ---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL       KM K+L   I +++  
Sbjct: 186 ADVEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGVQKMSKSLGNYIGIDE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T +P+ E + M K          +AK  +A  I  
Sbjct: 244 -EPKEMYGKAMSIPDELMMRYFMLVTDMPIEEQEDMEKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  +++    +  + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRALPTDIPEYAMNAP--TEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K+ A K+N    + E L ++         + +  GK+  +   
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLTLEEG-------MIVQVGKRKFVKIK 400


>gi|15595865|ref|NP_249359.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|116054393|ref|YP_788838.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296387162|ref|ZP_06876661.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|81541822|sp|Q9I5Q3|SYY2_PSEAE RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|9946546|gb|AAG04057.1|AE004501_9 tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa PAO1]
 gi|115589614|gb|ABJ15629.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 399

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 162/408 (39%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   I + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   + EID   K         + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S       M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKEGELPEDLPEIELSS---PEDMPVASVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + ++K++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGSVKVDGQVV-DRTFMLAL-----GETRVFQAGKKAFARITL 396


>gi|315646148|ref|ZP_07899268.1| tyrosyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278347|gb|EFU41663.1| tyrosyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 417

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 181/417 (43%), Gaps = 28/417 (6%)

Query: 11  ILSERGFIHQISNPRELD-----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +  RG +  I    E+       + +   +   +G D +A  LH GH   L  L   Q+
Sbjct: 19  EVISRGAVE-IVPEDEMKYKVMLSVVTGEPLRVKLGMDPSAPDLHVGHTVVLQKLRQFQE 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   ++G  T  IGDP+ + E+R+ +  +E++ + E  K      +          +
Sbjct: 78  LGHQVQLIIGDFTGRIGDPTGKSETRKQLSEEEVKHHAETYKKQIYKVLNPD----KTKI 133

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  + + +++  + +  +V RML  +    R +    +S  EF Y ++Q  D V
Sbjct: 134 YYNSEWLAPMTFAEVVS-LSAKVTVARMLERDDFTKRYQNGLPISIHEFFYPLMQGMDSV 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
            L       +++GG+DQ  N++ G  L +   T    A+T P++       KM K+L   
Sbjct: 193 ALK----TDVELGGTDQKFNLLMGRTLQKEYGTEAQVAITMPIIEGLDGVQKMSKSLGNY 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           I +++    P   +    ++ D  ++ + +  T     +++++    +       +AK  
Sbjct: 249 IGIDE---EPNEIYGKTMSVPDELMLKYYRLATDARSEDLNKLETGLQDGSVHPRDAKMG 305

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAG 360
           +A  +  M HG E A+ A    +  F      + +    ++++ +  G +GL+ L+ + G
Sbjct: 306 LAHTLVRMYHGMEAADAAQQHFVTVFQQHALPEEIEDFVVAEETLENGKIGLIKLLTQLG 365

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           FA S  EARR ++  A+K N    ++   +I  QD D      +  GK+      L 
Sbjct: 366 FAASNAEARRSIQQGAVKWNEEKWTDIYGEITPQDGD-----IIQVGKRKFARLKLS 417


>gi|319942888|ref|ZP_08017171.1| tyrosine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743430|gb|EFV95834.1| tyrosine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 406

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 103/431 (23%), Positives = 181/431 (41%), Gaps = 39/431 (9%)

Query: 1   MPAFKSDFLSI-------LSERGFIHQISNPRE----LDILCSQGVVTAYIGYDLTASSL 49
           M +  SD +         + +RG    +            L     +   +G D TA  L
Sbjct: 1   MSS--SDPIEETVQQSLAIIKRGIDELLVETELAAKLRRSLKENRPLRIKLGLDPTAPDL 58

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H GH   L  +  LQ  GH+ I L+G  T+ IGDPS R+ +R  +  ++I++N +     
Sbjct: 59  HLGHTVVLNKMRQLQDLGHQVIFLIGDFTASIGDPSGRNSTRPPLTREQIEQNAQTYFRQ 118

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
            S  +          +  N  W   I   D++ ++ S ++V R+L  +    RLK    +
Sbjct: 119 ASLVLDP----ERTEIRYNSAWCDKIGLRDMV-QLASRYTVARILERDDFTKRLKAGVPI 173

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           S  E  Y +LQ YD V L    +  L++GG+DQ  N++ G +L           LT PLL
Sbjct: 174 SVHEMLYPLLQGYDSVVL----EADLELGGTDQKFNLLVGRELQREYGKEPQCVLTMPLL 229

Query: 230 TT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--R 286
                  KM K+    + + +   + +       +I DA +  +   L+  PMSEID  R
Sbjct: 230 EGLDGVEKMSKSKGNYVGITEPANTMFAKV---MSISDAMMWRYFTLLSFRPMSEIDALR 286

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
                G+   EAK ++A E+    HG   ++ A           +    +  +++S    
Sbjct: 287 AECEAGRNPKEAKVLLARELVERFHGAGSSDAAVEDFELRARGGVP-DEIEEVTLS---- 341

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              +G++ ++  +G   S +EA R L  N ++++ S++++  L +        G   +  
Sbjct: 342 GAPLGIVAVLRDSGLVPSASEAGRMLAQNGVRVDGSVVTDRGLTLPA------GTYVVQV 395

Query: 407 GKKNHIICHLC 417
           GK+      + 
Sbjct: 396 GKRKFRRVTVA 406


>gi|302189577|ref|ZP_07266250.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 403

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 164/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINSLKSDCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFV-----FKLGATHVCQAGKKAFGCVTLV 397


>gi|297172443|gb|ADI23416.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_33G18]
          Length = 374

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 86/391 (21%), Positives = 167/391 (42%), Gaps = 22/391 (5%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L     +   +G+D TA  LH GH   +  +   Q  GH+ I ++G  T +IGDPS + 
Sbjct: 2   RLKGDRPLRVKVGFDPTAPDLHLGHTVVVNKMRQFQDFGHEIIFVIGDFTGMIGDPSGKS 61

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            +R  +   EI++N    +      +          +  N  W   +   + L  + + +
Sbjct: 62  VTRPPLLPDEIEKNAVTYREQVFKILDPK----KTRIEFNSVWSNELGA-EGLIRLAARY 116

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V R+L  +   +R +  + ++  E  Y ++Q YD V L    +  +++GG+DQ  N++ 
Sbjct: 117 TVARILERDDFSTRYRNREPIAIHELLYPLMQGYDSVAL----EADVELGGTDQKFNLLV 172

Query: 209 GIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G +L ++        LT PLL       KM K+L   + +      P   +    +I D 
Sbjct: 173 GRELQKQYGQAPQIVLTVPLLEGLDGVQKMSKSLGNYVGITDL---PEEMFGKLMSISDD 229

Query: 268 DVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            +  + + L+   +SE++++     QG    + K ++A EI    H    A +A    + 
Sbjct: 230 LMWRYFELLSLRNVSELEQLKIDAAQGMNPRDIKYMLAGEIVERFHSASHARRAKEEFVN 289

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F        +    ++ +     M +  +I +AG   ST+EA R L+  A++I+   ++
Sbjct: 290 RFQKGAMPARIVEKVVNSN--GEDMPIARVIKEAGLVASTSEALRMLEQGAVRIDGERVT 347

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +   +I + D        +  GK+      +
Sbjct: 348 DRDRKIGVGDAG-----IIQVGKRRFARIRV 373


>gi|239817633|ref|YP_002946543.1| tyrosyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239804210|gb|ACS21277.1| tyrosyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 410

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 175/413 (42%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EISLRGTDELLPQDEWVRKLQRSEASGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T+ IGDPS R+ +R  +  ++I+ N +      S  +          + 
Sbjct: 80  GHRVIFLIGDFTTTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDP----EKTEIR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + ++V RM+  +    R K  QS+S  EF Y ++Q YD V 
Sbjct: 136 YNSEW-SDPLGARGMIQLAAKYTVARMMERDDFNKRFKAGQSISVHEFLYPLMQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +         LT PLL       KM K+ +  I
Sbjct: 195 LK----SDLELGGTDQKFNLLVGRHLQQEYGQEPQCILTMPLLEGLDGVEKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            ++++  + +       +I D  +  +   L+   +++I+  +     G+   +AK  +A
Sbjct: 251 GISEDANTMFAKV---LSISDELMWRWYTLLSFQSLAQIEALKAEIAAGRNPKDAKVALA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    AE A    +           +P +S+        +G+  L+ +AG A 
Sbjct: 308 KEITARFHSAAAAETAEQDFIN-RSKGGVPDDIPELSLG----GAPLGIAQLLKQAGLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +E  R +    +++++ +IS++ L++        G   +  GK+      L
Sbjct: 363 SASEGNRLIDGGGVRVDSVVISDKALKLPA------GRYVVQVGKRKFARVTL 409


>gi|330993145|ref|ZP_08317083.1| Tyrosyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759915|gb|EGG76421.1| Tyrosyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 367

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 178/366 (48%), Positives = 250/366 (68%), Gaps = 2/366 (0%)

Query: 51  AGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF 110
            G L Q+MLL  + + GH+P++LMGGGT+ IGDPSFR+E+RR+M ++ I  N+  ++G  
Sbjct: 1   MGSLIQIMLLRLMHRHGHRPVALMGGGTARIGDPSFREEARRLMTAETIATNLRGVEGCL 60

Query: 111 SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
             F+  GTG +D L+ NN  WL  + YIDLLR++G  FSVNRMLSF+SVRSRL+REQ L+
Sbjct: 61  RQFLPLGTGPSDPLLANNADWLDRLSYIDLLRDVGIHFSVNRMLSFDSVRSRLEREQGLT 120

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
           FLEFNY ILQ+YDF EL   +   LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLT
Sbjct: 121 FLEFNYSILQSYDFRELNLRHGVTLQMGGSDQWGNIVSGIDLVRRMNGAQVFGLTTPLLT 180

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
           T+SG KMGKT  GA+WL+      +++WQ+WRN++DADV  F +  T LP++E DR+A L
Sbjct: 181 TSSGAKMGKTAQGAVWLSAARLPVFDYWQFWRNVEDADVGRFLRLFTELPLAECDRLAAL 240

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG 349
            G EINEAKK++ATE T++ HGR  A++AA AA   F+   + +  +PT+ +    ++ G
Sbjct: 241 GGAEINEAKKVLATEATSLCHGRAAAQEAADAARRTFEEGAVTAAALPTVQVPAALLAEG 300

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +    L V+AGFA S  EARR ++    ++N+ ++ +E   +   D      +KLS G+K
Sbjct: 301 VPAFRLFVEAGFAASNGEARRLIRGGGARVNDVVVGDEAQVVSTADLIDGA-LKLSSGRK 359

Query: 410 NHIICH 415
            HI+  
Sbjct: 360 RHILVQ 365


>gi|94984115|ref|YP_603479.1| tyrosyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94554396|gb|ABF44310.1| tyrosyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 413

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 170/411 (41%), Gaps = 18/411 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+IL  RG +  ++       L     +   +G D T   LH GH   L  +   Q  GH
Sbjct: 16  LAILR-RGVVDLVTEDDLRRKLERGQPLRIKLGADPTRPDLHLGHAVILRKMRQFQDLGH 74

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K I L+G  T++IGDPS + ++R  +  +E + N +         ++         +  N
Sbjct: 75  KVIMLIGDFTAMIGDPSGKSKTRPPLTLEETRANAQSYLEQCRLILR--DEPELLELRFN 132

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + Y D++  + S ++V R+L  +    RL     +S  E  Y + Q YD V L 
Sbjct: 133 SEWLEPLGYADVI-RLASRYTVARILERDDFTKRLSAGTPISLHELLYPLTQGYDSVALH 191

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N + G  L           +T PLL       KM K+L   I L
Sbjct: 192 ----SDVELGGTDQLFNNLVGRALQRDYGQEPQVVMTLPLLVGLDGTEKMSKSLDNYIGL 247

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
                 P   +     + D  + ++   LT LP   I  +          A + +A ++ 
Sbjct: 248 T---DEPDVMFAGLMKVPDPLLENYFTLLTDLPPERIQALLAGHPVA---AHRELARQVV 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
             +H + + + A           I  +++PT++++++E+     + +  L+V AG   S 
Sbjct: 302 AWLHPQADLDAAEERFRAVAKGGIP-ENVPTVTVAREELGESGRVSMARLVVLAGLEPSN 360

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             AR+ + +  +K+N    +  +  +   +    G + +  GK   +   L
Sbjct: 361 GAARKLIGNRGLKLNGKPYTEPQGTLSQDELTEEGGVVIQKGKDRFVRLIL 411


>gi|330938384|gb|EGH42010.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 399

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 164/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI   +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEIKGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S +++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGSVRIDGEVV-DRSFV-----FKLGATHVCQAGKKAFGRVTLV 397


>gi|295105726|emb|CBL03269.1| tyrosyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 403

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/404 (25%), Positives = 170/404 (42%), Gaps = 20/404 (4%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    +     L+ L     +   +G D TA  +H GH   L  L   Q  GH    ++G
Sbjct: 14  GAAQIVPESALLEKLKRGKPLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIG 73

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
            GT++IGDPS R+ +R  + S++I+ N +         +          +  N  WL S+
Sbjct: 74  DGTALIGDPSGRNSTRPQLTSEQIKANAQTYVDQAFKILDP----EKTTLRYNSEWLLSL 129

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
             ++ L ++ S F+V R+L  +   +R    Q +S  EF Y ++QAYD V +    +  +
Sbjct: 130 N-MEGLLKLASNFTVARILERDDFHNRYTNSQPISLHEFLYPLMQAYDSVVI----EADV 184

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSP 254
           ++GG+DQ  N++ G +L E++       LT PLL  T    KM K+    I L      P
Sbjct: 185 ELGGTDQLFNLLAGRELMEKMGMEPQVCLTLPLLEGTDGVQKMSKSYGNYIGLT---DEP 241

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVH 311
            + +    +I D  +V + +  + LP+ EID + +         N+ K+ +A  I    +
Sbjct: 242 ADMFGKVMSIPDELMVKYYRLASALPVDEIDEIERGLAADELHPNKVKRALAQNIVAAYY 301

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
               A+ A       F        +P  +        G + L  LI  AG A S  EARR
Sbjct: 302 DEAAAQAAEEQFDLVFKQHAVPDDIPEFAADLAPNDEGTVYLAKLIADAGLAASAGEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +    +K+N   +  +   +            L  GK+  +  
Sbjct: 362 LIDGGGVKVNGEPVPAKSYNVDPAMLAG---ATLQVGKRKFVRL 402


>gi|297180578|gb|ADI16789.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_11K06]
          Length = 407

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 107/401 (26%), Positives = 182/401 (45%), Gaps = 25/401 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M    S+ L IL  RG + +I   + L+   ++   +    G+D TA  LH GH   +  
Sbjct: 1   MSLSTSEKLEILK-RG-VEEIIPEKGLEKKLNKNKPLIIKAGFDPTAPDLHLGHTVLINK 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+ + L+G  T +IGDPS   E+R ++  +++++N E  +      +     
Sbjct: 59  LKQFQDLGHQVVFLIGDFTGMIGDPSGVSETRPILTVEQLKKNSETYQEQIFKILD---- 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TW   +   +L+       +V RML  +    R K  + +S  EF Y ++
Sbjct: 115 KKKTKIEFNSTWFKKMTSAELINLSSKM-TVARMLERDDFSKRYKGNKPISIHEFIYPLV 173

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMG 238
           Q YD  EL       +++GG+DQ  N++ G D+ +     +   +T P+L  T    KM 
Sbjct: 174 QGYDSFELK----SDIELGGTDQKFNLLVGRDIQKSFGMEEQIIMTLPILEGTDGVKKMS 229

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L+  I L +   SP + +    +I D  +  +   L+     EI  + K   + +N  
Sbjct: 230 KSLNNYIGLKE---SPNDMFGKIMSISDDLMWRYFDLLSFKSSVEIKELKKKTEQGLNPM 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           EAKK+++ EI T  HG E+A  A       F        +  I +S    +  + +L L+
Sbjct: 287 EAKKMLSAEIVTRFHGEEKALLAEKEFTNRFSKGNDPAEIKLIKLSMK--ASSISVLDLL 344

Query: 357 V-----KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                       S +EARR +   A+KI+   IS+E + ++
Sbjct: 345 SSEELGDHKLCKSKSEARRMIAQGAVKIDGKKISDEAISVQ 385


>gi|171060119|ref|YP_001792468.1| tyrosyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170777564|gb|ACB35703.1| tyrosyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 413

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 103/410 (25%), Positives = 168/410 (40%), Gaps = 30/410 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     L  L         +   +G D TA  +H GH   L  L  LQ  GH  
Sbjct: 27  RGCEELLPEADWLKKLVRSEASGTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHTV 86

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  + +++I+ N E      S  +          +  N  
Sbjct: 87  IFLIGDFTSMIGDPSGRNTTRPPLTAEQIKLNAETYYRQASLVLDPA----RTEIRYNSE 142

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W C       +  + S ++V RM+       R     S++  EF Y ++Q YD V L   
Sbjct: 143 W-CDPLGARGMIALASRYTVARMMERNDFHERFHAGTSIAVHEFLYPLMQGYDSVALK-- 199

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL       KM K+    I +++
Sbjct: 200 --SDLELGGTDQKFNLLMGRHLQAEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYIGISE 257

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
                 + +    +I D  + S+   L+      I   +     G+   +AK ++A EIT
Sbjct: 258 A---ANDMFAKLLSISDTLMWSYFTLLSFRSEEAIAALKAEVDAGRNPKDAKVLLAKEIT 314

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG   A+ A           I    +P +S+S       +G+  L+ +A    S++E
Sbjct: 315 ARFHGAAAADAAEQDFQNRAKGGIP-DDLPQVSLS----GAPLGIGALLKQANLVPSSSE 369

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R ++   ++I+  +IS++ L++        G   L  GK+      L 
Sbjct: 370 AMRLIEQGGVRIDGGVISDKGLKLAA------GRYVLQVGKRKFAQVDLS 413


>gi|330812094|ref|YP_004356556.1| tyrosyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380202|gb|AEA71552.1| tyrosyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 399

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 161/408 (39%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEELLVESELIEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKTQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQMGPADFIRLTSQYTVARMLERDDFDKRYKSNQPIAIHEFLYPLVQGYDSVALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRGYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EI+             + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDVLMWRYFELLSFRSMDEINAFRADVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA            +P I ++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHRAAGNRMKDGELPDDLPEIELTAAE---DMPIAAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++I+  ++ +     +L             GKK      L
Sbjct: 355 RDLLGSGGVRIDGEVV-DRTYIYEL-----GSTHVCQAGKKAFARITL 396


>gi|77164428|ref|YP_342953.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434296|ref|ZP_05047804.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|115305811|sp|Q3JCM3|SYY_NITOC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76882742|gb|ABA57423.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090629|gb|EDZ67900.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 407

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/412 (25%), Positives = 179/412 (43%), Gaps = 23/412 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  +  RG    +        L    ++    G+D TA  LH GH   L  L   Q+ G
Sbjct: 7   ILDEIR-RGTEEVLLEEELKLRLEQGRILRVKAGFDPTAPELHLGHTVLLNKLRQFQEFG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T +IGDPS ++ +R+ +   +I EN    +      +         L++ 
Sbjct: 66  HEVLFLIGDFTGMIGDPSGKNVTRQPLTRDKILENARTYEEQIFRVLDP----EKTLVVF 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  +     L  + S ++V RML  +    R + ++ ++  EF Y +LQ YD V L
Sbjct: 122 NSSWMSGMTA-ADLVRLSSHYTVARMLERDDFYKRYQGKRPIAIHEFLYPLLQGYDSVAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  N++ G DL +     +   +T P+L       KM K+L   I 
Sbjct: 181 K----ADVELGGTDQKFNLLVGRDLQKAYGQEQQIIITMPILEGLDGVQKMSKSLGNYIG 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           +++    P   +    +I D  +  + + L++ PMSEI R      QG    + K  +A 
Sbjct: 237 ISEP---PREIFGKLMSISDDLMWRYLELLSSRPMSEISRWKKEVEQGANPRDIKVKLAK 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H    AE+   A +  F      + +P I I       G+ +  L+ ++    S
Sbjct: 294 EIVARFHDDSMAEQVHEAFVAQFRRGAMPEDIPEILIVAGR--EGIAIARLLKESALTAS 351

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+E+ R +K  A+KI+   + N+ LQI            +  GK+      +
Sbjct: 352 TSESLRLIKQGAVKIDGQRLGNQSLQI-----LPGITHVVQVGKRRFARVSI 398


>gi|330444439|ref|YP_004377425.1| tyrosyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807549|gb|AEB41722.1| tyrosyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 412

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 143/422 (33%), Positives = 222/422 (52%), Gaps = 25/422 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L +RG +   S    LD +  +  V+AY+G+D TA+SLH GH   +  L  L + G
Sbjct: 4   FVLSLKDRGILENFS--AGLDSI--EKPVSAYLGFDPTAASLHIGHWIGICFLKRLAQYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS ++  R ++ ++E+ EN +KI    +  +          +LN
Sbjct: 60  MTPIALVGGATGMVGDPSGKNAERSLLSAKEVSENSQKITKSLAKHLP------GVTILN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+     ID LR++G  F + +ML+ + V+ RL  E+ LS+ EF+YM+LQAYDF  L
Sbjct: 114 NIDWVQHFSVIDFLRDVGKHFRLGQMLTKDVVKQRLDSEEGLSYTEFSYMLLQAYDFYYL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GI+   R    +   LT PLLT + G K+GKT SG IWL
Sbjct: 174 FKNYGVVLQCGGSDQWGNITLGIEFIRRHNLGQAHGLTYPLLTDSQGKKIGKTESGTIWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E+TSPY  +QY+  + D+DV+  A+ LT L   EI  + +    +    K+ +A  I 
Sbjct: 234 DPELTSPYELYQYFLRLPDSDVLVVARTLTMLSNEEIFALDQQFLSDPIGVKRTVAENIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL------------LTL 355
             +HG +   +A          ++ S         ++ V+ G G+            + L
Sbjct: 294 HAIHGEQGLSEAQRVTESIHPGALISLSEQNF---QELVANGFGIKIKKSAVLGKRWIDL 350

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            V  GF  S  EARR ++   + +NN  I + +  ++      +  + L+ GKK  ++ +
Sbjct: 351 CVSVGFCNSKGEARRLIEQKGLYVNNFTIRDNQSTLEESQICFSHYVLLAQGKKRKLVLY 410

Query: 416 LC 417
           L 
Sbjct: 411 LI 412


>gi|255292552|dbj|BAH89665.1| tyrosyl-tRNA synthetase [uncultured bacterium]
          Length = 413

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 103/410 (25%), Positives = 177/410 (43%), Gaps = 29/410 (7%)

Query: 15  RGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     +  L     S   +   +G D TA  +H GH   L  L  LQ  GH+ 
Sbjct: 24  RGCEELLPQDDWVKKLARSEASGQPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHQV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  + +++I+ N E  K      +          +  N  
Sbjct: 84  IFLIGDFTSLIGDPSGRNSTRPPLSAEQIRANAETYKAQAFKVLDPA----RTELRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W         + ++ + ++V RM+       R K    +S  EF Y ++Q YD V L   
Sbjct: 140 W-SDALGARGMIQLAARYTVARMMERNDFAERFKAGTPISVHEFLYPLMQGYDSVALK-- 196

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L +         LT PLL       KM K+    + + +
Sbjct: 197 --SDIELGGTDQKFNLLVGRHLQQEYGQEPQCILTMPLLEGLDGVEKMSKSKGNYVGITE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           +  + +       +I D  +  +   L+   ++EI+ +        N  +AK ++A EIT
Sbjct: 255 DANTMFAKV---LSISDELMWRWYTLLSFRSIAEIEALKAEVAGGRNPKDAKVMLAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATSTN 366
              H    AE A               H+P IS+   E    G+GL+  + ++G A ST+
Sbjct: 312 ARFHSAAAAEAAEADFA-HRSRGGVPDHIPEISLPTGEGGALGIGLV--LKQSGLAPSTS 368

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R +    +++++S++S++ L++K       G   +  GK+      L
Sbjct: 369 EANRLIDGGGVRVDSSVVSDKGLKLKA------GTYVVQVGKRKFARVTL 412


>gi|304310529|ref|YP_003810127.1| Tyrosyl-tRNA synthetase, class Ib [gamma proteobacterium HdN1]
 gi|301796262|emb|CBL44470.1| Tyrosyl-tRNA synthetase, class Ib [gamma proteobacterium HdN1]
          Length = 404

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 94/406 (23%), Positives = 173/406 (42%), Gaps = 21/406 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 14  LIKRGVFEILLEAELIEKLRQGRPLKIKAGFDPTAPDLHLGHTVLINKLKVFQDLGHEIY 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++++R  +  +++  N +  +      +     +    ++ N  W
Sbjct: 74  FLIGDFTGMIGDPSGKNQTRPPLSVEQVMANAKTYEDQIFKILD----REKTKVVFNSAW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +     L  + S  +V RML  +    R K EQ ++  EF Y ++Q YD V L    
Sbjct: 130 LEKLGA-AGLIRLASNQTVARMLERDDFSKRYKAEQPIAIHEFLYPLIQGYDSVAL---- 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  ++MGG+DQ  N++ G +L +         +  PLL       KM K+L   + +N  
Sbjct: 185 EADVEMGGTDQRFNLLMGRELQKASGQAPQTVIMVPLLEGLDGVQKMSKSLGNYVGIN-- 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
             +P   +    ++ D+ +  + + L+   + EI    +           K+++A EI  
Sbjct: 243 -DAPGEMYTKLLSVPDSLMWRYFELLSFRTVEEIADFRRQVDSGSSPQAFKQLLAEEIIA 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG   A+ A   A   FD     + MP I +   +   G+ ++     A   ++T +A
Sbjct: 302 RFHGESAAQAAKRGAGNRFDWGDAPEDMPEIELVAPD-GAGVPVVNAAKAAALVSTTTQA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           R  ++ +A+++   ++S+    + +      G   L  GKK     
Sbjct: 361 RSFVQQSALRVGGRVVSDVSEVLPV-----GGPYILQAGKKKFARV 401


>gi|325917548|ref|ZP_08179751.1| tyrosyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536264|gb|EGD08057.1| tyrosyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 403

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 159/411 (38%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L S        G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGADEILKLDQLEARLKSGVPQRVKAGFDPTAPDLHLGHTVLLNKMRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +   ++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNVTRKPLSRDDVLANARTYEEQVFKILD----RERTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++      +V RML  +    R   +Q ++  EF Y ++Q YD V L    
Sbjct: 126 FGQMSAADMIKLSAQH-TVARMLERDDFAKRFAGQQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I +N+ 
Sbjct: 182 -ADVELGGTDQKFNLLMGRGLQEHYGQAPQVVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEINEAKKIIATEI 306
                +       I D     +   L+        + +            E K  +A E+
Sbjct: 241 ---AIDIVTKTMKIGDELTWRWIDLLSFDIGVAEAARLKEQVASGALHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           TT  H    AE+A             +  +P   +     + G+ + +L+  AG   S +
Sbjct: 298 TTRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQQVVIP--AEGLRIASLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+KI+  +I +         F       +  GK+N     L 
Sbjct: 356 EANRKLKERAVKIDGEVIEDAGRV-----FAPGFEAVIQIGKRNFARVSLI 401


>gi|294625179|ref|ZP_06703821.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600498|gb|EFF44593.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 404

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 160/411 (38%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L S   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEILKLDQLQARLASGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLVNARTYEEQVFKILD----RERTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++      +V RML  +    R   +Q ++  EF Y ++Q YD V L    
Sbjct: 126 FGQMSAADMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I +N+ 
Sbjct: 182 -ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEINEAKKIIATEI 306
                +       I DA    +   L+        + +            E K  +A E+
Sbjct: 241 ---AIDIVTKTMKIGDALTWRWIDLLSFDISLAEAARLKEQVASGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +     + G+ L  L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRLAGLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVKIDGEVVEDLSRV-----FTQGFEGVIQVGKRNFARVSLV 401


>gi|119356645|ref|YP_911289.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119353994|gb|ABL64865.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 405

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 178/414 (42%), Gaps = 26/414 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            + L I++    +  IS       L         +   +G D +   LH GH   L  L 
Sbjct: 7   KEQLDIITA-NTVEIISINELEQKLAESIKTDKPLKIKLGADPSRPDLHLGHSVVLGKLR 65

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GH+ I ++G  T++IGDPS + ++R  + ++E ++N        S  +       
Sbjct: 66  QFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLSAEEARQNGVSYFEQASKILDP----E 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  WL ++K+ D++  + S ++V RML  +    R +  + +S  EF Y + Q 
Sbjct: 122 KTTICYNADWLGAMKFADVI-RLSSHYTVARMLERDDFERRYRSNEPISIHEFLYPLAQG 180

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKT 240
            D V L  +    +++GG+DQ  N++ G DL           +T PLL  TA   KM K+
Sbjct: 181 MDSVHLEND----VELGGTDQKFNLLVGRDLQREYGIKPQVCITMPLLVGTAGEEKMSKS 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L  A+  N     P + +    +I DA +  + K L     +  + +         +AK+
Sbjct: 237 LGNAVCFNDL---PSDMYGKLLSIPDALIAPYCKLLLPGGNANGNVILDRIVDSPRDAKR 293

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    +  E+A+ A T   + F       ++          S+ + L+ L+V  G
Sbjct: 294 TLAREIVAQYYSAEQADDAETHFDQVFVHKKTPDNIELFEFE----SQSLPLVDLLVILG 349

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             TS +EARR ++  A+ +N+  + +    + L+D        +  GK+     
Sbjct: 350 AYTSKSEARRMIQQKAVLVNDVKVEDTNTLVALED----KPTIIKAGKRKFFKV 399


>gi|258512087|ref|YP_003185521.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478813|gb|ACV59132.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 413

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 177/413 (42%), Gaps = 31/413 (7%)

Query: 12  LSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +  RG   +I    EL         +   +   +G D T+S +H GH   L  L   Q  
Sbjct: 21  IIRRGT-AEIVPEDELVQKLRESVRTGRPLRVKLGIDPTSSDIHLGHTVVLHKLRQFQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   ++G  T  IGDP+ + E+R+ + ++E+ EN +         +          ++
Sbjct: 80  GHQVFLVIGSFTGQIGDPTDKAETRKQLSAEEVAENAKTYVAQLYKILDP----EKTQVV 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + +  ++  + S  +V RML  E  + R +  + +   EF Y ++QAYD V 
Sbjct: 136 YNGDWLAPLDFAQVI-RLASTITVARMLEREDFQKRFQDNRPIHVHEFFYPLMQAYDSVH 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G  L      P   A+  PLL       KM K+L   I
Sbjct: 195 LR----ADVELGGTDQKFNLLMGRHLQREFGQPMQVAVMLPLLEGLDGVNKMSKSLGNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKII 302
            +N+    P N +    ++ D+ +  + + L+  P  EI+ M +          +AK  +
Sbjct: 251 GVNE---EPNNMFGKLMSVPDSLLFKYYELLSLRPQDEIEAMRREVEAGRMNPRDAKMQL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+     G E   +A       F        +P   ++         ++  +V  G A
Sbjct: 308 AEELVERFLGPEARREAVEHWRTVFQKGGLPDDIPERRVA----GEAQWIVKWLVDLGLA 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S ++ARR ++  A+++N + +++  +Q + QD D      L  GK+  +   
Sbjct: 364 QSNSDARRAIQEGAVRLNGNKVTDMDVQYRPQDGD-----VLQRGKRQFVRLR 411


>gi|320331997|gb|EFW87933.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330882166|gb|EGH16315.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 403

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 167/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGCVTLV 397


>gi|320325937|gb|EFW81996.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 403

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 167/409 (40%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 MDKLSPADFI-RLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
               Y+      +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 241 PGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFV-----FKLGATHVCQAGKKAFGCVTLV 397


>gi|39938955|ref|NP_950721.1| tyrosyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|81402377|sp|Q6YQA6|SYY_ONYPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39722064|dbj|BAD04554.1| tyrosyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 413

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 135/417 (32%), Positives = 210/417 (50%), Gaps = 16/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F   L  R  I   SN  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ 
Sbjct: 2   SFYEELKWRNLIKDCSNETQVKELLDNNQVKFYCGFDPTSHSLTVGHLVQITMILLMQRQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T +IGDP    E R+++  +   +N + I+    + +           +
Sbjct: 62  GHLPVILVGGATGLIGDPKE-TEERKLLSLENSLQNAKSIECQLKNILLNKQ----VEFV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  I  LR  G  F++N MLS  +V  RL     +SF EF+YMILQ+ DF  
Sbjct: 117 NNYQWLSQIDIISFLRNYGKLFNINYMLSKHAVAKRL--ASGISFTEFSYMILQSLDFHH 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L KN+  RLQ+GGSDQWGNI  G++L  +L+       +++PLL  + GTK GK+  G +
Sbjct: 175 LYKNHKVRLQLGGSDQWGNITSGLELIRKLEKKSDALGISTPLLLNSDGTKFGKSEKGVL 234

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           W+N  MTSPY  +QY+ N+ D +V+++ K LT +P  EI  + K   +  +   A+K + 
Sbjct: 235 WVNPSMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKQEILELEKNTLENPQQRLAQKALT 294

Query: 304 TEITTMVHG----REEAEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIV 357
             I T++H     +E  +            S   +   +   ++        + L+  +V
Sbjct: 295 QNIITLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSTKEDILLVDALV 354

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +   ATS +EAR  +K N IK+ N  I +    I  ++      + L  GKKN+ + 
Sbjct: 355 QTKLATSKSEAREFIKDNTIKLFNQKIKSLDFAITKKNTLFDKYVLLKKGKKNNALI 411


>gi|255506637|ref|ZP_05382276.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525107|emb|CBJ14578.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434650|gb|ADH16828.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis E/150]
          Length = 412

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 134/422 (31%), Positives = 214/422 (50%), Gaps = 21/422 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L 
Sbjct: 1   MQQLIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLCRLA 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G  P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          
Sbjct: 57  AYGITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYLP------GIR 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF
Sbjct: 111 IVNNADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG 
Sbjct: 171 AHLFKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA 
Sbjct: 231 IWLDPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAE 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPT----------ISISKDEVSRGMGLLT 354
            I   VHG E   +A  A    F     S               + +++ ++  G   L 
Sbjct: 291 VIVKDVHGSEGLAQAQAATESFFASKGKSITEAELVALVESGVGVKVARADLI-GKRWLD 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V+ GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   + 
Sbjct: 350 IVVELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVI 409

Query: 415 HL 416
            L
Sbjct: 410 DL 411


>gi|150020085|ref|YP_001305439.1| tyrosyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149792606|gb|ABR30054.1| tyrosyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 398

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 174/413 (42%), Gaps = 26/413 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L IL  R  +  IS    L+ L     +   +G D +   LH GH   L  L   Q 
Sbjct: 4   SNQLEILK-RNVVDFISEEELLERLKENRPLRIKLGVDPSRPDLHLGHAVVLKKLKEFQD 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  I ++G  T +IGDP+ R+ +R M+  +E+++N E         +     ++   +
Sbjct: 63  LGHHVILIIGDFTGMIGDPTGRNITRPMLSEKEVRKNAETYAKQAFKILD----ESKTEV 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  +K+ D++R  G + +V RML  +    RL   Q +S  EF Y + QAYD V
Sbjct: 119 RFNNEWLGKMKFADVVRLAGKY-TVARMLERDDFSKRLSEGQPISIAEFLYPLAQAYDSV 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGA 244
            +       +++GG+DQ  N++ G  + E         +T P++  T    KM K+    
Sbjct: 178 AIK----ADVELGGTDQLFNLLVGRKVQEEYGLKPQIVMTMPIIEGTDGKLKMSKSYDNY 233

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKI 301
           I        P + +    +I D  +V + + +T +P  E    +++ K       + K  
Sbjct: 234 IAFT---DEPNDMYGKVMSIPDELIVKYMRLVTDIPEEEIVRYEKLIKESKVNPRDVKMR 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    +    A++A    ++ F        MP I       +    ++ ++V    
Sbjct: 291 LAREIVKFFYNENAAKEAEENFIKVFRKKELPDEMPEIKFE----NGKYNIVDVLVAVKA 346

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             S +EA+R +    +K +   + + K  + ++         L  GK+     
Sbjct: 347 TQSRSEAKRVVNQGGVKFDGKKVESFKEDVTIE-----NEHVLRVGKRKFYKL 394


>gi|325919686|ref|ZP_08181688.1| tyrosyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325549794|gb|EGD20646.1| tyrosyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 403

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 165/413 (39%), Gaps = 26/413 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  +   Q+ GH+ 
Sbjct: 10  LIGRGA-EEILKLDQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS ++ +R+ +   ++  N    +      +     +    +  N  
Sbjct: 69  IFLIGDFTGMIGDPSGKNVTRKPLSRDDVLANARTYEEQVFKILD----RERTEVRFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +   D+++      +V RML  +    R   +Q ++  EF Y ++Q YD V L   
Sbjct: 125 WFGQMSAADMIKLSAQH-TVARMLERDDFAKRFSGQQPIAIHEFLYPLVQGYDSVALK-- 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I +N+
Sbjct: 182 --ADVELGGTDQKFNLLMGRGLQEHYGQAPQVVLTMPLLEGLDGVAKMSKSLGNYIGINE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEINEAKKIIATE 305
                 +       I D     +   L+        + +            E K  +A E
Sbjct: 240 P---AIDIVTKTMKIGDELTWRWIDLLSFDISVAEAARLKEQVASGELHPREVKLRLARE 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +TT  H    AE+A             +  +P   +     + G+ + +L+  AG   S 
Sbjct: 297 LTTRFHDAAAAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSN 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +EA R LK  A+KI+  ++ +       + F       +  GK+N     L G
Sbjct: 355 SEATRKLKERAVKIDGEVVEDL-----ARQFGPGFEGVIQVGKRNFARVALVG 402


>gi|258592585|emb|CBE68894.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) [NC10
           bacterium 'Dutch sediment']
          Length = 415

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 100/425 (23%), Positives = 179/425 (42%), Gaps = 29/425 (6%)

Query: 1   MPAFKSDFLSIL--SERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHL 54
           M   K+     L    RG +  +S+   L+ L     +   +   +G D +A  LH GH 
Sbjct: 1   MNDLKAQAYEQLCAIRRGAVEIMSDAELLEKLERSLRTGIPLRIKLGADPSAPDLHLGHT 60

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             L  L   Q  GH+ I L+G  T +IGDP+ R E+R+ +  +E+Q N +  K      +
Sbjct: 61  VVLRKLRQFQDFGHQVIFLIGDFTGMIGDPTGRSETRKPLSVEEVQANADTYKRQIFRIL 120

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                     +  N  WL  + +   +  + +  +V R+L  +  + R +  + +   EF
Sbjct: 121 DED----RTEIRFNSEWLSRMDF-AGVIRLAAQHTVARLLERDDFQKRYREGRPIGVHEF 175

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TAS 233
            Y + Q YD V L       +++GG+DQ  N++ G +L          AL +PL+  T  
Sbjct: 176 LYPLAQGYDSVVLR----ADVELGGTDQKFNLLVGRELQRAYGQEPQVALITPLIEGTDG 231

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR---LTTLPMSEIDRMAKL 290
             KM K+L   I +++     Y       +I D  +V +A+    +    +  +D   KL
Sbjct: 232 VQKMSKSLGNYIGIDEPAREVY---GKAMSIPDELIVKYAELVAGVLPEAVEAMDEGLKL 288

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                  AK  +A E+  +  G + AE+AA      F        +   ++  +  +  +
Sbjct: 289 GTLHPRTAKAKVAWELVALYRGEQAAEEAALEFDRMFRDKRLPDEISLFAVEDERAA--V 346

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+ LI ++G   S +EARR ++   + ++  ++ NE  ++ L          L  GK+ 
Sbjct: 347 DLVWLIKESGGTKSLSEARRLIRQGGVSLDGQVVRNECARVSLDC-----EHLLKVGKRF 401

Query: 411 HIICH 415
                
Sbjct: 402 FRRVK 406


>gi|319789980|ref|YP_004151613.1| tyrosyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114482|gb|ADU96972.1| tyrosyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 407

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 102/407 (25%), Positives = 172/407 (42%), Gaps = 22/407 (5%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
            +RG    I     L+ L S   +    G+D TA  LH GH   L  L   Q+ GH+   
Sbjct: 10  IKRGTAEIIGEEELLEKLKSGRKLRIKAGFDPTAPDLHLGHTVLLWKLRDFQELGHEVYF 69

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T++IGDP+ ++E+R  +  +E+ +N E         +         +++ N  WL
Sbjct: 70  LIGDFTAMIGDPTGKNETRPPLTREEVLKNAETYAQQVFKILDP----EKTVVVFNSEWL 125

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   DL++ + S ++V RML  +    R K  + +   EF Y +LQ YD V L     
Sbjct: 126 GQMSAADLIK-LASKYTVARMLERDDFEKRFKEGRPIHIHEFIYPLLQGYDSVVLK---- 180

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L       +   +  P+L       KM K+L   I + +  
Sbjct: 181 ADVELGGTDQKFNLLMGRHLQREYGQEEQVCIMMPILEGLDGVQKMSKSLGNYIGILEP- 239

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +     I D  +  + + +T +P  EI+ M +   +      EAKK +A  I  
Sbjct: 240 --PEEQFGKVMRISDELMWRYYRLVTRVPEEEIEEMERAVKEGRLHPMEAKKRLAETIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A++A       F        +P      +     + L  L+   G   ST+E 
Sbjct: 298 TFHGEEAAKRAREHFERVFSRRELPPEIPEPE--VEVPENPIWLPKLLKILGLVKSTSEG 355

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR ++  A++I+   I +E  ++        G   +  GK+      
Sbjct: 356 RRQIRGGAVRIDGRKILDEDYKVD----LLAGEFVVQVGKRRFAKIK 398


>gi|147901502|ref|NP_001091557.1| tyrosyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|146186980|gb|AAI40542.1| YARS2 protein [Bos taurus]
 gi|296487352|gb|DAA29465.1| tyrosyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 478

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 132/437 (30%), Positives = 209/437 (47%), Gaps = 29/437 (6%)

Query: 8   FLSILSERGFIHQISNPR----ELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLM 58
            L++   RG   +    +    EL  L  +G       T Y G+D TA SLH GHL  L+
Sbjct: 38  LLAVQKARGLFKEFFPEKGTKTELPELFDRGTGGKFPQTIYCGFDPTADSLHVGHLLALL 97

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFS 111
            LF  Q+ GH  I+L+GG T+ +GDPS R + R  + ++ +Q N        + +     
Sbjct: 98  GLFHFQRAGHNVIALVGGATARLGDPSGRTKEREALDAERVQSNARALSQGLKALAANHQ 157

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                G       +L+N  W      ++ L  +G  F +  +LS  SV++RLK  + +S 
Sbjct: 158 QLFANGRTWGSFTVLDNSAWYQKQDLVNFLAAVGGHFRMGTLLSRLSVQTRLKSSEGMSL 217

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F ++ PL+T+
Sbjct: 218 AEFLYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGISVPLITS 277

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
            +G K+GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L 
Sbjct: 278 TTGAKLGKSAGNAVWLNRDKTSPFELYQFFLRQQDDLVERYLKLFTFLPLPEIDHIMQLH 337

Query: 292 --GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTI 339
               E    +K +A E+T +VHG+E    A       +  SI +  +             
Sbjct: 338 VKEPEKRGPQKRLAAEVTKLVHGQEGLASAKRCTQALYHSSIDALEVMSDQELKELFKEA 397

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDS 398
           S S+  +  G  +L    KA          R +    + IN+  ++N +  + + Q    
Sbjct: 398 SFSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILK 457

Query: 399 TGNIKLSFGKKNHIICH 415
            G   L  GK+N  I  
Sbjct: 458 NGLSLLKIGKRNFYIIK 474


>gi|121534232|ref|ZP_01666057.1| tyrosyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307335|gb|EAX48252.1| tyrosyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 405

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 185/415 (44%), Gaps = 29/415 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +RG + +I     L     +       +   +G D TA  +H GH   L  L   Q  
Sbjct: 10  IIKRG-VAEILPEPLLVEKLKRSVSTGVPLRVKLGLDPTAPDIHLGHTVVLRKLKQFQDL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I ++G  T  IGDP+ + E+R+ +  +EI+ N    +      +     K    ++
Sbjct: 69  GHHIIIIIGDFTGRIGDPTGKSETRKQLTEEEIRINARTYEEQIFRILD----KEKTEVV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N +WL  + + D+++ + + ++V RML  E    R K  + +S  EF Y ++Q YD V 
Sbjct: 125 FNSSWLAPLSFADVIK-LAAQYTVARMLEREDFSKRFKEGRPISIHEFFYPLMQGYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       ++ GG+DQ  N++ G  L E+       A+  P+L       KM K+L   I
Sbjct: 184 LK----ADIEFGGTDQKFNLLMGRHLQEQFGQEPQVAIMMPILEGLDGVNKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            +N+    P   +    +I D  +V + + +T + + E++ +            +AK  +
Sbjct: 240 GINEP---PGEIYGKAMSIPDDLMVRYYELVTDVSLEELEAIRHGLKTGGLHPRDAKMRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A  +  + HG E A+ A    +  F       +MP IS+   +    + L  L+V+ G A
Sbjct: 297 AHTLVRLYHGIEAADNAQAEFIRVFQQRDIPTNMPEISLPASD--APVWLPKLLVQLGLA 354

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            S +EA+R ++  A+KIN   I+N   ++ + D      + +  GK+      L 
Sbjct: 355 VSNSEAKRAIQQGAVKINGEKITNVDEEVTIAD-----GMVVQVGKRKFAKIVLS 404


>gi|258406326|ref|YP_003199068.1| tyrosyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798553|gb|ACV69490.1| tyrosyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 399

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 167/411 (40%), Gaps = 26/411 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  RG    I+    L+ L     +T   G+D TA  LH GH   +  L   Q+ GH  
Sbjct: 6   ELIRRGSEEIINEEELLERLRGDRPLTIKAGFDPTAPDLHLGHTVLIQKLKHFQELGHNV 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDPS + E+R+ +  +E++ N E  K      +     +    +  N  
Sbjct: 66  VFLIGDFTGMIGDPSGKSETRKALTREEVRINAETYKRQIFRILD----REKTRIAFNAE 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+ S    D +  + S ++V RML  +    R +  + +S  EF Y ++Q YD V L   
Sbjct: 122 WMDSFSAADFV-HLCSQYTVARMLERDDFAKRYQANKPISVHEFLYPLVQGYDSVALQ-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L           LT P+L       KM K+L   + + +
Sbjct: 179 --ADVELGGTDQKFNLLMGRTLQREYGQTPQVILTMPILEGLDGVQKMSKSLGNYVGIEE 236

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
                 + +    +I D  +  + + L+ L +  I  +             AK+ +A EI
Sbjct: 237 P---AQDMFGKLMSISDELMWRYFELLSDLSLEAIAALQAQVASGELHPKAAKEQLAFEI 293

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T   H   EAEKA       F      + MP I I+ +E      ++  I  +G   S  
Sbjct: 294 TERFHSTAEAEKAKANFANVFSQHQLPEDMPEIRIAPEE----ASVIATIDHSGLCASRA 349

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E +R  K  A+  +   ++         D  + G      GKK      + 
Sbjct: 350 EIKRLCKQGAVTCDGEKVT------AFGDMLAPGEHVFKIGKKRFFKAVVS 394


>gi|294793862|ref|ZP_06758999.1| tyrosine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455432|gb|EFG23804.1| tyrosine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 402

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 174/407 (42%), Gaps = 30/407 (7%)

Query: 18  IHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L       +     +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDP----EKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR   S+ +V RM+  +    R K  + +   EF Y ++Q +D V L     
Sbjct: 131 ESMNFADVLRLASSY-TVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALH---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++  
Sbjct: 186 ADVEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIGIDE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T + + E + M K          +AK  +A  I  
Sbjct: 244 -EPKEMYGKAMSIPDELMMRYFMLVTDMSIEEQEDMTKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  ++     +  + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRAMPTDIPEYAMDAP--TEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K+ A K+N    + E L+++         + +  GK+  +   
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLKLEDG-------MIIQVGKRKFVKIK 400


>gi|262039163|ref|ZP_06012483.1| tyrosine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746779|gb|EEY34298.1| tyrosine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 410

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 32/415 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +RG    I N  E      +       +   +G D + + LH GH   L  L   Q 
Sbjct: 18  DILKRGCDE-IINESEFKKKLEKSISTNTPLRIKLGIDPSGTDLHFGHAVPLRKLKQFQD 76

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   L+G  T  IGDP+ + E+R+M+ ++++QENI+      S  +          +
Sbjct: 77  LGHQVFFLIGTFTGRIGDPTGKSETRKMLSAEQVQENIKTYLDQVSLILDLD----KIKV 132

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           + N  WL  +   + +  + S F+V++M+S E    RL   + +S +EF Y ILQ YD V
Sbjct: 133 VYNGDWLEKLNL-EDVLRLLSQFTVSQMISREDFAKRLSENKPVSLIEFMYPILQGYDSV 191

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
           EL       +++G ++Q  N++ G DL +     +   +  P+L       KM K+L+  
Sbjct: 192 ELR----ADVELGATEQKFNLLRGRDLQKNAGQEQQVCMIMPILEGLDGVEKMSKSLNNY 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKI 301
           I +     SP + +    ++ D  +  + + +T +   E   +            EAKK 
Sbjct: 248 IGVK---DSPNDMFGKVMSVSDDLMYRYYEVITEVAQEEIAKMKEEINNGTLHPMEAKKR 304

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAG 360
           +  E+  + H  EE++KA       F        +P + +   E    +G++ L+V + G
Sbjct: 305 LGEEVVKIYHNEEESKKAREWFENVFSKKNLDVDLPEVELEYKE----IGVIDLLVRETG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             +ST+EARR ++    KIN+  + + K  +K+Q       + +  GKK  +   
Sbjct: 361 LLSSTSEARRLVEQGGFKINDEAVKDVKAVVKIQ-----NGMVIRAGKKKIVKVK 410


>gi|78186451|ref|YP_374494.1| tyrosyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|115305813|sp|Q3B5D0|SYY_PELLD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78166353|gb|ABB23451.1| tyrosyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 405

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 101/411 (24%), Positives = 174/411 (42%), Gaps = 26/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L I++    +  IS+      +     +   +   +G D +   LH GH   L  L   Q
Sbjct: 10  LDIITA-NTVEIISSAELEQKIQHSIKTGAPLKVKLGADPSRPDLHLGHSVVLRKLREFQ 68

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I ++G  T++IGDPS + ++R  + ++E +EN        S  +          
Sbjct: 69  DLGHEAILIIGDFTAMIGDPSGKSKTRPQLSAEEARENGASYFEQASKILDPH----KTT 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  WL ++ + D++  + S ++V RML  +    R +  + +S  EF Y + QA D 
Sbjct: 125 ICYNADWLGNMTFADVI-RLSSHYTVARMLERDDFERRYRSSEPISIHEFLYPLAQAMDS 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    +++GG+DQ  N++ G DL           +T PLL    G  KM K+L  
Sbjct: 184 VHLRND----VELGGTDQKFNLLVGRDLQREYGILPQVCITMPLLVGTGGEDKMSKSLGN 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+  N     P + +    +I D  + ++ + L  L       + +   ++   AK+ +A
Sbjct: 240 AVCFNDL---PSDMYGRVLSIPDTLIENWCRLLLPLTGEGRRAILEGWEEDPRTAKRRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    +   EA  A       F        +     S+ E+     L+ L+   G A 
Sbjct: 297 REIVMQYYSAGEAGAAEEHFDRLFVHKQAPTEIELTRFSEPEL----PLVDLLTTLGAAA 352

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  +ARR ++ NA+ I+   I++ K  I L D        L  GK+     
Sbjct: 353 SKTDARRMIQQNAVSIDEEKITDVKTIITLSDEPK----TLKAGKRKFFRI 399


>gi|93007093|ref|YP_581530.1| tyrosyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92394771|gb|ABE76046.1| tyrosyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 403

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 89/409 (21%), Positives = 175/409 (42%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG    +S    +  L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 14  IIQRGTQEILSEDDLVKKLKLNRPLRIKAGFDPTAPDLHLGHTVLINKLKHFQDLGHEIY 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T+ IGDPS ++ +R  +  ++I+ N +         +     K    ++ N  W
Sbjct: 74  FLIGDYTAKIGDPSGKNSTRPPLTDEQIKVNAQTYAEQVFKILD----KEKTRIVFNSEW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L    
Sbjct: 130 FKDMSAGDMI-QLSSQLTVSRMLERDDFSKRYAAQTPIAIHEFLYPLVQGYDSIALK--- 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  NI+ G  L  R        +T P+L       KM K+L   + +   
Sbjct: 186 -ADVELGGTDQTFNILMGRTLQGRYGQEPQVCITVPILEGLDGVNKMSKSLGNYVGIY-- 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITT 308
             +P   +Q   ++ D  +  + + L+  PM E++ +        N  E K+I+A E+  
Sbjct: 243 -DAPGTMYQKLLSMPDTLIRRYFEFLSFKPMEEVEALMAEMENGRNPQEIKRILAEELIE 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H  + A  A  +A            +P +++   E    + +  ++ +A  A +++ A
Sbjct: 302 RFHDADAAANAHKSAGNVLADGELPVDLPEVTLDL-EGQDALFITQILNQAELAKNSSSA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  +K  A+K++  ++ +    +      S   + +  GKK +    + 
Sbjct: 361 KDMIKRGAVKVDGEVV-DAGFSLT-----SGQTVVIQAGKKAYAKVTVA 403


>gi|206895710|ref|YP_002247508.1| tyrosyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738327|gb|ACI17405.1| tyrosyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 398

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 169/408 (41%), Gaps = 24/408 (5%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + ++  +  I+       L         +   +G D +A  LH GHL  L  L   Q+ 
Sbjct: 8   EILKKNVVDLITEEDLKSKLEKTKAEGRPLRVKLGADPSAPDLHLGHLVVLRKLRQFQEF 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ + ++G  T+ IGDP+ R+++R  +  +E+++N E  +      +            
Sbjct: 68  GHRIVFIIGDFTACIGDPTGRNKTRPPLTEEEVRKNAETYQEQVFKVLDPELVDIK---- 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +   D++  + S ++V ++L  +    R K    +   E  Y + QAYD V 
Sbjct: 124 FNSEWNAPLSARDVILNLASRYTVAKLLERDDFNMRYKSGIPIYVHELLYPLFQAYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           +       +++GG+DQ  N++ G DL +         +T PLL       KM K+L   +
Sbjct: 184 IR----ADVELGGTDQVFNLLVGRDLQQSHGQEPQVVMTLPLLVGLDGEKKMSKSLGNYV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
             N     P + +    +I D  + S+   LT    +EI R+         +AK  +A  
Sbjct: 240 AFN---DPPKDMFGKLMSIPDDLMPSYFNLLTDYSENEIKRILSGHP---RDAKLKLAWT 293

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT+  +G EEA       +  F      ++M    I          +  L+V  G A+S 
Sbjct: 294 ITSFFYGEEEASYEQEEFLRVFSRRELPEYMDAYEIETLYNEGVRTITDLLVFIGAASSR 353

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +EA+R +    +++N++ + +    ++L          L  GK+    
Sbjct: 354 SEAKRLVAGGGVQLNDTRVDDPMAPLQLT-----PGSVLRVGKRKFFK 396


>gi|145220013|ref|YP_001130722.1| tyrosyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145206177|gb|ABP37220.1| tyrosyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 405

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 174/409 (42%), Gaps = 25/409 (6%)

Query: 11  ILSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L     +  I+           L ++  +   +G D +   LH GH   L  L   Q  
Sbjct: 11  DLITANTVEIITEKELEAKISHSLKTRTPLKVKLGADPSRPDLHLGHSVVLRKLRDFQDL 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I ++G  T++IGDPS + ++R  + ++E + N E      S  +          + 
Sbjct: 71  GHEAILIIGDFTAMIGDPSGKSKTRPQLTAEEARRNGESYFEQASKILDPK----KTTIC 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL ++ + D++  + S  +V RML  +    R +  + +S  EF Y + QA D V 
Sbjct: 127 WNSDWLGAMTFADVI-RLSSHCTVARMLERDDFERRYRSGEPISIHEFLYPLAQAMDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G DL           +T PLL    G  KM K+L  AI
Sbjct: 186 LKND----IELGGTDQKFNLLVGRDLQREYGIAPQVCITMPLLVGTGGVEKMSKSLGNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
             N     P + +    +I D  + ++   L     ++I  + +    +   AK+++A  
Sbjct: 242 CFN---DPPTDMYGRMLSIPDTLITNYCSLLLPPGTADIGSITEESATDPRSAKRMLARN 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I  + +  E AE+A +     F      +++    +S  E    + ++ L+V+ G A+S 
Sbjct: 299 IVALYYSPEAAEEAQSHFDRVFVQKKAPENIELFELSHSE----ITVVDLLVELGAASSK 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +ARR ++  AI I+   I      I L          L  GK+     
Sbjct: 355 TDARRMIQQKAILIDEERIEEINASITLS--IEPKT--LRAGKRKFFRI 399


>gi|221069189|ref|ZP_03545294.1| tyrosyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220714212|gb|EED69580.1| tyrosyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 438

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 171/414 (41%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            ++ RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 48  EVTLRGVDELLPKDEWVQKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDL 107

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDPS R+ +R  + +++I+ N E      +  +          + 
Sbjct: 108 GHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQIKANAETYYTQAAKVLDPA----RTEVR 163

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +     + ++ + ++V RM+      +R     S+S  EF Y +LQ YD V 
Sbjct: 164 YNSEWCDQLGA-RGMIQLSAKYTVARMMERNDFHTRFTDGSSISLHEFLYPLLQGYDSVA 222

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L       +   LT PLL       KM K+ +  I
Sbjct: 223 LK----SDLELGGTDQKFNLMMGRHLQAEYGQEQQCVLTMPLLVGLDGVHKMSKSKNNYI 278

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + ++  + +       +I D  +  +   L+   +++I   +     G     AK  +A
Sbjct: 279 GITEDANTMFAKV---LSISDELMWDWYTLLSFKSLADIAALKAEIEAGGNPKHAKVALA 335

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    AE A    +           +P I++        +G+  L+ +A  A 
Sbjct: 336 KEITARFHSAAAAETAEQDFIN-RSKGGIPDDIPEINLP----GAPLGIGALVKQANLAA 390

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST EA R +    ++I+ ++IS+  L++        G   L  GK+      L 
Sbjct: 391 STGEANRLIDGGGVRIDGNVISDRALKL------DAGTFVLQVGKRKFARVTLS 438


>gi|218889391|ref|YP_002438255.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|218769614|emb|CAW25374.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa LESB58]
          Length = 399

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 162/408 (39%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   I + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   + EID   K         + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S       M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKDGELPEDLPEIELSS---PEDMPVASVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + ++K++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGSVKVDGQVV-DRTFMLAL-----GETRMFQAGKKAFARITL 396


>gi|254468670|ref|ZP_05082076.1| tyrosyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087480|gb|EDZ64763.1| tyrosyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 389

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 172/411 (41%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  +  RG    +      + + S   +    G+D TA  LH GH   L  L   Q  GH
Sbjct: 2   LDEIK-RGADEILVFSEFEEKIKSGKKLKIKAGFDPTAPDLHLGHTVLLNKLRQFQNFGH 60

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T +IGDP+ ++ +R  +   ++++N +  +      +     K    ++ N
Sbjct: 61  EVIFLIGDFTGMIGDPTGKNTTRPPLTEDQVKQNAKTYQNQVFKILD----KEKTRVVFN 116

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++   D + ++ + ++V RML  +    R K  QS+S  EF Y ++Q YD V L 
Sbjct: 117 SEWLKNLGA-DGMLKLSAQYTVARMLERDDFSKRFKSNQSISIHEFMYPLMQGYDSVAL- 174

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +         LT PLL       KM K+L+  I +
Sbjct: 175 ---EADVELGGTDQKFNLLMGRELQKAYGQTPQSILTMPLLEGLDGVNKMSKSLNNYIGI 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATE 305
            +    P   +    +I D  ++ +   L+     EI+   K      N    K   + E
Sbjct: 232 EEP---PEVMYAKLLSISDDLMLRYIDLLSLKNNDEINSWKKRLKGGENPKNIKDEFSKE 288

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H  E   KA                +    ++K +    + +  ++    F +ST
Sbjct: 289 IIERFHDHEGYLKAKKDFE-QRSSGHAPDEVQEFKMNKQD---NLAIPNILKNINFVSST 344

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R +KS  I+++   I ++   I   +F       +  GK+      L
Sbjct: 345 SEALRLMKSGGIRVDGEKI-DKDYSINTDEF------LIQVGKRKFGKIKL 388


>gi|70732895|ref|YP_262666.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|115305818|sp|Q4K517|SYY_PSEF5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68347194|gb|AAY94800.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 399

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 159/408 (38%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEELLVESELIEKLKRGEPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DKMGPADFIRLTSQYTVARMLERDDFDKRYSTNQPIAIHEFLYPLVQGYDSVALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRGYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
              P   +    +I DA +  + + L+   M EI+             + K  +A EI  
Sbjct: 241 ---PGVMYGKLVSIPDALMWRYFELLSFRSMDEINAFKADVDAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA            +P I +   E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKDGELPDDLPEIELVAAE---DMPIAAVLNKAGLVKNAAMA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++ +         +          G+K      L
Sbjct: 355 RDLLGSGGVRVDGEVV-DRTYI-----YAVGSTHVCQAGRKAFARITL 396


>gi|148664996|gb|EDK97412.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Mus
           musculus]
          Length = 479

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 132/432 (30%), Positives = 206/432 (47%), Gaps = 29/432 (6%)

Query: 13  SERGFIHQISNP----RELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L  +        T Y G+D T  SLH GHL  L+ LF  
Sbjct: 44  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 103

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS-------SFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N   ++                
Sbjct: 104 QRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFAD 163

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y
Sbjct: 164 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFY 223

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 224 QVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 283

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKE 294
           +GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L     E
Sbjct: 284 LGKSAGNAVWLNREKTSPFELYQFFVRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPE 343

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKD 344
              A+K +A E+T +VHG+E  + A       +  SI +  +             S S+ 
Sbjct: 344 KRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIEALEVMSDQELKELFKEASFSEL 403

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIK 403
            +  G  ++    KA          R +    + IN+  ++N +  + + Q     G   
Sbjct: 404 VLDPGTSVIDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVIGQHILKNGLSL 463

Query: 404 LSFGKKNHIICH 415
           L  GK+N  I  
Sbjct: 464 LKIGKRNFYIIK 475


>gi|39930579|ref|NP_937889.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|50401561|sp|Q8BYL4|SYYM_MOUSE RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|37805338|gb|AAH60295.1| Tyrosyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 472

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 132/432 (30%), Positives = 206/432 (47%), Gaps = 29/432 (6%)

Query: 13  SERGFIHQISNP----RELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L  +        T Y G+D T  SLH GHL  L+ LF  
Sbjct: 37  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 96

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS-------SFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N   ++                
Sbjct: 97  QRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFAD 156

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y
Sbjct: 157 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFY 216

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 217 QVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 276

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKE 294
           +GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L     E
Sbjct: 277 LGKSAGNAVWLNREKTSPFELYQFFVRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPE 336

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKD 344
              A+K +A E+T +VHG+E  + A       +  SI +  +             S S+ 
Sbjct: 337 KRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIEALEVMSDQELKELFKEASFSEL 396

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIK 403
            +  G  ++    KA          R +    + IN+  ++N +  + + Q     G   
Sbjct: 397 VLDPGTSVIDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVIGQHILKNGLSL 456

Query: 404 LSFGKKNHIICH 415
           L  GK+N  I  
Sbjct: 457 LKIGKRNFYIIK 468


>gi|238019117|ref|ZP_04599543.1| hypothetical protein VEIDISOL_00979 [Veillonella dispar ATCC 17748]
 gi|237863816|gb|EEP65106.1| hypothetical protein VEIDISOL_00979 [Veillonella dispar ATCC 17748]
          Length = 402

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 173/407 (42%), Gaps = 30/407 (7%)

Query: 18  IHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L       +     +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDP----EKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR   S+ +V RM+  +    R K  +++   EF Y ++Q  D V L     
Sbjct: 131 ESMNFADVLRLASSY-TVARMMERDDFNKRFKEGRAIGVHEFMYPLMQGQDSVALH---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL       KM K+L   I +++  
Sbjct: 186 ADVEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGVQKMSKSLGNYIGIDE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T +P+ E + M K          +AK  +A  I  
Sbjct: 244 -EPKEMYGKAMSIPDELMMRYFMLVTDMPIEEQEDMEKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  ++     +  + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRALPTDIPECAMDAP--TEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K+ A K+N    + E L ++         + +  GK+  +   
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLTLEDG-------MIVQVGKRKFVKIK 400


>gi|116515016|ref|YP_802645.1| hypothetical protein BCc_075 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256870|gb|ABJ90552.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 428

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 135/421 (32%), Positives = 214/421 (50%), Gaps = 11/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K++ L  L+++ F  +I N  EL+       V  Y G+D T +SLH GHL  ++ L   Q
Sbjct: 4   KTNILDFLNKKNFFSKIFNQFELNNYLKNKNVFLYCGFDPTENSLHIGHLLPIICLKHFQ 63

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
             G+ PI L+GG TSI+GDPSF+   R+      ++ N   ++     F           
Sbjct: 64  NFGYTPIILIGGATSIVGDPSFKIYERKKQSLDLLRFNQICLEKQLLFFFNNQECLNNKV 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
           ++LNN +W  +   +  LR+IG +FSVN M+  ESV+ R +K +  +SF EF+Y +LQAY
Sbjct: 124 IILNNYSWFKNFSILSFLRKIGIYFSVNYMIHKESVKKRLIKEKTGMSFTEFSYSLLQAY 183

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF++L + Y  +LQ+GGSDQWGNI+ GI L ++L    +F  T+ LL  ++G K GKT +
Sbjct: 184 DFLKLYEKYGVKLQIGGSDQWGNILSGIRLIKKLYKDDVFGATNSLLVKSNGEKFGKTET 243

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-EAKKI 301
             IWL+ + TSP+ F+Q+W NI D D+ +F +  T +   +I+ +        N   KKI
Sbjct: 244 DTIWLDAKKTSPFKFYQFWVNISDEDIDNFLQWFTFIDEKKINILFHDNNFIKNIINKKI 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS--------ISKDEVSRGMGLL 353
              E  T +   ++   +    +     +    ++            I     +  + L 
Sbjct: 304 FLAEFLTKLVHGKDVLISVKRIIFFLFGNGSITNIKEEDCIQLLKDGIPSIICNSFLDLP 363

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++VK     S N+AR  + S AIKIN  + + +       D        +S GKKN+ +
Sbjct: 364 HILVKTLLVNSLNKARNMIISGAIKINGIVQTQKDYNFSKSDLLFNKYTFISKGKKNYFL 423

Query: 414 C 414
            
Sbjct: 424 I 424


>gi|319941829|ref|ZP_08016151.1| tyrosyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804762|gb|EFW01629.1| tyrosyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 421

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 95/412 (23%), Positives = 166/412 (40%), Gaps = 26/412 (6%)

Query: 12  LSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG     I      +      +   +   +G D TA  +H GH   L  L  LQ  G
Sbjct: 27  LIARGTDTFLIQSEFEQKLARSKATGEPLRCKLGLDPTAPDIHIGHTVVLNKLRQLQDLG 86

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  T+ IGDPS R+ +R  +  ++I+ N +         +          +  
Sbjct: 87  HTVIFLVGDFTAAIGDPSGRNTTRPPLTREQIEANAQTYLNQAGMVLDLD----KTEVRY 142

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  +      L ++ S +++ R+L  +    R K E  ++  E  Y ++Q YD V L
Sbjct: 143 NSEW-SNALGATGLIQLASRYTLARLLERDDFAKRFKEELPIAMHELLYPLMQGYDSVAL 201

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  L++GGSDQ  N++ G +L  +        LT PLL       KM K+    I 
Sbjct: 202 K----ADLELGGSDQRFNLLVGRELQRQYGQEPQCILTMPLLVGLDGVQKMSKSKKNYIG 257

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +        + +    +I D  + ++   L+    +EI   +    +G+   +AK ++A 
Sbjct: 258 IT---DPANDMFGKVMSITDDLMWNWYDLLSLRSNAEIAQLKKECAEGRNPRDAKVLLAR 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H +  A+ A       F        +  ++++       +G++ LI  AG A S
Sbjct: 315 EIIERFHDKAAADAAEAEFNARFQKGAVPNDIKDVTVAAPTGE--IGIMQLIKVAGLAPS 372

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA R++    ++I+   + +  L+I+           L  GK+      +
Sbjct: 373 NAEAGRNIDQGGVRIDGESVRDRTLKIQA-----GAEFVLQVGKRRWARVKV 419


>gi|329850515|ref|ZP_08265360.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840830|gb|EGF90401.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 370

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 238/368 (64%), Gaps = 10/368 (2%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY- 116
           M+L WLQKTGHKPI LMGGGT+ +GDPS +D  R+++   +I EN+  IK +F+ F+ + 
Sbjct: 1   MMLRWLQKTGHKPIVLMGGGTTKVGDPSGKDTQRQLLDDAKIAENLNGIKQVFTKFLTFE 60

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                 T    A+M+NN+ WL    YI+ LR  G  F++NRM++F+SV+ RL+REQ L+F
Sbjct: 61  SVQGGHTDSNAAIMVNNDDWLSQYGYIEFLRTFGPHFTINRMMTFDSVKLRLEREQPLTF 120

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSP 227
           LEFNYM++QA DF EL    +C LQMGGSDQWGNII G++L  R+         F LT+P
Sbjct: 121 LEFNYMLMQAVDFRELNLRQNCVLQMGGSDQWGNIINGVELTRRMGEGREGAHAFGLTTP 180

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLT+ASG KMGKT SGA+WLN ++ SPY++WQYWRN +D DV  F +  T LP+ EI R+
Sbjct: 181 LLTSASGAKMGKTASGAVWLNADLLSPYDYWQYWRNAEDKDVGRFLRLFTELPLDEIARL 240

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
             L+G EIN+AKK++A E T ++HG E A  A   A + F+  + S  +PT+ I +  + 
Sbjct: 241 EALEGAEINDAKKVLADEATRLLHGDEAAATARDTAQKAFEQGVLSADLPTVEIERAVLD 300

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+ L  L  K G  +S  EARR  +   +++N+  I++    +   D ++ G IK+S G
Sbjct: 301 EGIMLAALATKIGLTSSNGEARRLAQGGGLRVNDLAITDGNQLVTAMDLNADGVIKVSQG 360

Query: 408 KKNHIICH 415
           KK  ++  
Sbjct: 361 KKKILLVK 368


>gi|115717870|ref|XP_781450.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115956114|ref|XP_001186796.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 697

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 126/422 (29%), Positives = 205/422 (48%), Gaps = 24/422 (5%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
            I Q S+   L  L +    + Y G D TA SLH G+L  L+ L   Q+ GH+ I+L+GG
Sbjct: 279 TIVQSSDE--LPKLLTSSPQSIYCGVDPTAESLHIGNLLALIALIHCQRAGHQCIALIGG 336

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--------FIKYGTGKTDALMLNN 128
            T++IGDPS +   R  +    ++ N   I              F K      D  ++NN
Sbjct: 337 ATALIGDPSGKSTERESLHPDLVERNAASIHQSLQRIFTNHERLFWKRDKTLPDIRIMNN 396

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + W  S   +  L   G FF +  MLS +SV++RL   + +SF EF Y I QAYDF+ L 
Sbjct: 397 QDWYKSENLVQFLGTYGRFFRMGSMLSRQSVQTRLNSPEGMSFSEFTYQIFQAYDFLHLH 456

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y C +Q+GG+DQ GNI+ G DL  R    +++ LT PL+T+A+G K+GKT   A+W+N
Sbjct: 457 EQYGCNIQIGGTDQLGNIMSGHDLIRRTAGNEVYGLTIPLVTSATGDKLGKTAGNAVWIN 516

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEI 306
           ++ TS ++ +QY+  + D DV    K  T LP+ +ID + +      E  +A++++A ++
Sbjct: 517 RDKTSEFDLYQYFIRMHDNDVEKSLKLFTFLPLQDIDAVVRKHKAKPEKRKAQRLLAEQV 576

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS----------ISKDEVSRGMGLLTLI 356
             +VHG E  EKA       +     +    ++             +  +  G+ +  + 
Sbjct: 577 LLLVHGEEGLEKARRLTEALYSSDPGALERLSVEEVSQLFGGGSFVEIMLEPGLTVYQVA 636

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
           V AG     +     ++   + +N   ++N    ++      S     L  GKKN+ +  
Sbjct: 637 VAAGALP-KDRGVGIIEDGGVYVNKQRVTNPHEVLQKGLHILSNNVTLLRIGKKNYTLIK 695

Query: 416 LC 417
             
Sbjct: 696 WV 697


>gi|21233264|ref|NP_639181.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770222|ref|YP_244984.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188993420|ref|YP_001905430.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|81303830|sp|Q4UPQ9|SYY_XANC8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81792490|sp|Q8P475|SYY_XANCP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21115100|gb|AAM43072.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575554|gb|AAY50964.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167735180|emb|CAP53392.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 403

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 162/411 (39%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L S   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEILKLEQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +T   +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNVTRKPLSREDVLANARTYEEQVFKILD----RTRTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++      +V RML  +    R   +Q ++  EF Y ++Q YD V L    
Sbjct: 126 FGQMSAADMIKLSAQH-TVARMLERDDFAKRFAGQQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I +N+ 
Sbjct: 182 -ADVELGGTDQTFNLLMGRGLQEHYGQAPQVVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEINEAKKIIATEI 306
                +       I D     +   L+        +              + K  +A E+
Sbjct: 241 ---AIDIVTKTMKIGDTLTWRWIDLLSFDISVAEAARFKEDVAAGNLHPRDVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +S    + G+ + +L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSVLPLQQVSVP--AEGLRIASLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+KI+  ++ +       + F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVKIDGEVVDDL-----ARQFGPGFEGVIQVGKRNFARVALV 401


>gi|257126985|ref|YP_003165099.1| tyrosyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050924|gb|ACV40108.1| tyrosyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 412

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 41/434 (9%)

Query: 1   MPAFKSDFLSI---------LSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTA 46
           M   +++ + +         +  RG    I N  E      +       +   +G D T 
Sbjct: 1   MSIDRNNEIEVKNEVERQFNILSRGCDE-IINENEFKKKLEKSISTNTPLRVKLGIDPTG 59

Query: 47  SSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI 106
           S LH GH   L  L   Q  GH+ + L+G  T  IGDP+ + E+R+M+  +++ ENI+  
Sbjct: 60  SELHLGHAVPLRKLKQFQDLGHEVLFLIGTFTGRIGDPTGKSETRKMLSEEQVSENIKTY 119

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                  +          ++ N  WL  +   D L  +   F+V++M+S E    RL   
Sbjct: 120 LDQVKLILDLD----KINVVYNADWLEKLSLSDALNLLSQ-FTVSQMISREDFSKRLAEN 174

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           + +S +EF Y ILQ YD VEL       +++G ++Q  N++ G DL +     +   +  
Sbjct: 175 KPVSLIEFMYPILQGYDSVELK----ADVELGATEQKFNLLRGRDLQKNFGQEQQVCMIM 230

Query: 227 PLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           P+L       KM K+L   I +     +P + +    +I D  + ++   +T +P   I+
Sbjct: 231 PILVGLDGVEKMSKSLGNYIGVK---DTPNDMFGKVMSISDELMENYYTMITDVPFERIE 287

Query: 286 RMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
            +            EAKK +  E+  + +G E A++A       F     +  +P + + 
Sbjct: 288 EIKVQIADGSLHPMEAKKQLGAEVVKIYYGEEAAKEARDWFENVFSKRNLNVDLPEVELE 347

Query: 343 KDEVSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             EV    G++ L+V +     +T+EARR ++    KIN+  I + K  +          
Sbjct: 348 YKEV----GIIDLLVKETELLQTTSEARRLIQQGGFKINDEPIKDVKATV-----ILESG 398

Query: 402 IKLSFGKKNHIICH 415
           + +  GKK  +   
Sbjct: 399 MIIRAGKKKIVKVK 412


>gi|169847762|ref|XP_001830590.1| tyrosine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116508326|gb|EAU91221.1| tyrosine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 498

 Score =  292 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 134/465 (28%), Positives = 209/465 (44%), Gaps = 57/465 (12%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
              S  L  ++ RGFI  ++   +L           Y G D TA SLH GHL  L+ L  
Sbjct: 27  NHSSAVLDEVTARGFIQDVTRRADLAKALEAKPQGLYTGIDPTAPSLHIGHLIPLLCLAH 86

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK------- 115
               GHK I L+G  T  IGDPS R   R++ +++++  NI  +    ++F +       
Sbjct: 87  FHLHGHKIIPLIGSATGRIGDPSGRSTERKLQQTEQLNANIAGLTRSVTNFFERAFVHAS 146

Query: 116 -----YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
                    + +  +++N  W      +D L+ +G    +N M++ ESVR+RL  +Q +S
Sbjct: 147 RRLGLQRDAQPEVKVVSNHVWHEKFSMLDFLQVVGIHARINTMMNRESVRARLSSQQGIS 206

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--------------- 215
           F EF Y +LQAYDF  L +N+ C +Q+GGSDQWGNI+ GI+L  +               
Sbjct: 207 FTEFTYQLLQAYDFHYLNQNHGCTIQIGGSDQWGNIVAGIELIGKLSPSSTAQGTGKEAT 266

Query: 216 --LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
               +P  F +T+PLLTT SG K GK+   A+WL++ +TS ++F+QY+    D+ +  + 
Sbjct: 267 PPTTSPDAFGITTPLLTTPSGEKFGKSAGNAVWLDENLTSVFDFYQYFFKSPDSVLPLYL 326

Query: 274 KRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
              T LP  +I  + +           +K +A E+T MVHG    E+A T     F  SI
Sbjct: 327 NLFTFLPRPKIAEIVETHNARPELRLGQKTLAAEVTEMVHGASALERAQTLTSLLFPTSI 386

Query: 332 HSQHMPT--------------------------ISISKDEVSRGMGLLTLIVKAGFATST 365
            +   P                           + I + E+     ++ L  + G   S 
Sbjct: 387 SASASPDGSAQSDYSGLTTEQITSAFDSSDPRLVYIPEAELVESTPVVKLASRCGLVASN 446

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +  R  + S  + +NNS + + K  I            L  GK  
Sbjct: 447 SAGRSLVASRGLYLNNSPVPDIKTTISKNQLIDGRVAILRAGKDK 491


>gi|126699125|ref|YP_001088022.1| tyrosyl-tRNA synthetase [Clostridium difficile 630]
 gi|254975078|ref|ZP_05271550.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255092467|ref|ZP_05321945.1| tyrosyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255100552|ref|ZP_05329529.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255306490|ref|ZP_05350661.1| tyrosyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255314205|ref|ZP_05355788.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255516884|ref|ZP_05384560.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255649985|ref|ZP_05396887.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260683136|ref|YP_003214421.1| tyrosyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260686734|ref|YP_003217867.1| tyrosyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520061|ref|ZP_07406408.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115250562|emb|CAJ68386.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Clostridium difficile]
 gi|260209299|emb|CBA62678.1| tyrosyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260212750|emb|CBE03875.1| tyrosyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 402

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/409 (21%), Positives = 174/409 (42%), Gaps = 31/409 (7%)

Query: 18  IHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + + +EL             +   +G D +A  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDDLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ + ++++  N +  +      +     K   ++  N  WL
Sbjct: 75  IIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLD----KEKTIVRFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + + ++ +  +V RML  E  + R + +  +S  EF Y ++QAYD + L    +
Sbjct: 131 AKLNF-EDVIKLAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIAL----E 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L           +  PL+       KM K+L   I +++E 
Sbjct: 186 ADIELGGTDQRFNLLMGRSLQREFGMESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
              Y   Q    I D  ++ +   +T +   E++++     +      + K  +A EI T
Sbjct: 246 GIMY---QKSMEIPDELIIKYYNLVTDVHPDEVNKIESQLKEGSVNPRDIKMNLAREIVT 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A++A       F      + + TI +       G  L+ ++V      S +E 
Sbjct: 303 LYHGEESAKEAEERFKSVFQKGQIPEDIQTIQVK----EDGFDLIEVLVSNEIVKSKSEV 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR      +K+N   + +    +K         + +  GKK  +   L 
Sbjct: 359 RRLASQGGVKVNGEKVEDLSTIVKES------ELVVQIGKKKFVKIELV 401


>gi|269122410|ref|YP_003310587.1| tyrosyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616288|gb|ACZ10656.1| tyrosyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 404

 Score =  292 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 187/426 (43%), Gaps = 36/426 (8%)

Query: 3   AFKSDF---LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHL 54
             K++     +IL  RG   +I N  EL +   +       +   +G D T + LH GH 
Sbjct: 2   DIKNEVERQFNILK-RGC-EEIINEAELKLRLEKSLKENKPLKIKLGIDPTGTDLHIGHA 59

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             L  L   Q+ GH    L+G  T+ IGDP+ + E+R+M+  ++IQ+NI          +
Sbjct: 60  VPLRKLKQFQELGHTVQFLIGTFTARIGDPTGKSETRKMLTPEDIQKNIATYLEQVFLIL 119

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                     +L N  WL  +   D L  +   F+V +M+S E    RL   + +S +EF
Sbjct: 120 D----SEKTEILYNADWLEKLSLQDFLGLLSQ-FTVAQMISREDFAKRLAENKPVSLVEF 174

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-AS 233
            Y ILQ YD V +     C +++G ++Q  NI+ G DL +         +  P+L     
Sbjct: 175 MYPILQGYDSVAMK----CDIELGATEQKFNILKGRDLQKNFGMDPQICMLLPILEGLDG 230

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKL 290
             KM K+L+  I +     +P + +    +I D  +  + + +T +P+ EI +     + 
Sbjct: 231 VEKMSKSLNNYISIT---DTPNDMFGKIMSISDDLMFRYYEIITDIPLEEIAQLKADMEN 287

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                 E KK + +E+  + H +EE  KA       F        +P + +   E     
Sbjct: 288 GTLHPMEIKKRLGSEVVAIYHNKEEGLKAREWFENVFSKKNLDVELPEVELEYTE----T 343

Query: 351 GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           G++ ++VK     +ST+EARR ++   +KIN+  + +    +  +       + +  GKK
Sbjct: 344 GVIDILVKHLNLLSSTSEARRLIQQGGLKINDEPVKDINHMVTPE-----AGMIIRAGKK 398

Query: 410 NHIICH 415
             +   
Sbjct: 399 KIVKVK 404


>gi|119486140|ref|ZP_01620200.1| tyrosyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119456631|gb|EAW37760.1| tyrosyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 416

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 185/422 (43%), Gaps = 28/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M   +     I  E+  +   S     +     S   +    G D T + +H GH   + 
Sbjct: 19  MTKLRRGVSEIFPEQ--LDSESPDDNFNQRLAQSDQPLRVKFGIDPTGTDIHLGHSVVVR 76

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH  + ++G  T+ IGDP+ + E R+ + ++++Q+N +         + + T
Sbjct: 77  KLRDFQDAGHTAVLIIGDFTARIGDPTGKSEVRKQLTTEQVQQNAQTYLDQVRPILDFDT 136

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +  N  WL ++    +L  + +  +V +ML+ E    R ++E  +   EF Y +
Sbjct: 137 P-GRLEIRYNSEWLSTLDLAKILDLLSTM-TVGQMLAKEGFALRYEKEAPIYLHEFLYPL 194

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKM 237
           +Q YD V +    +  +++GG+DQ  N+  G DL    +    F L  P+L  T    KM
Sbjct: 195 MQGYDSVAV----EADIELGGTDQKFNLAVGRDLQRYFQQKPQFGLLMPILIGTDGVQKM 250

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
            K+L   + L+++  + Y+       I D  +V + + LT LP+ E+            E
Sbjct: 251 SKSLGNYVGLSEDALTMYS---KLEKIPDDLIVQYFELLTKLPLDELPE-------NPRE 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-MPTISISKDEVSRGMGLLTLI 356
            +K++A ++ +  HG+E A +A  AA+     +      +P  S++  EV     L  ++
Sbjct: 301 RQKLLALDVVSQYHGKEAALEAQKAAINLTGGNTKQADAVPEFSLA--EVEFPAKLFYIL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +G   S +EARR ++   ++++   I++  L     D  +     L  GKK      L
Sbjct: 359 SASGLCKSGSEARRQMQGGGVRLDGEQITDANLIFDSIDDLNGR--VLQVGKKKF--VRL 414

Query: 417 CG 418
            G
Sbjct: 415 VG 416


>gi|170759521|ref|YP_001786595.1| tyrosyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169406510|gb|ACA54921.1| tyrosine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 400

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/406 (26%), Positives = 183/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQNTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L     
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLK---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N+  
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ ++  +   +     + K  +A EI  
Sbjct: 244 -DANDIYGKVMSIPDGMIVKYYELATDIHPDEVAKIKAILEAENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++ DE    + ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASVKAEGNFKNIFQQGNIPEDIDTIKVNLDE----INIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K ++        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNEN-------ILQVGKKKFIKI 396


>gi|114566637|ref|YP_753791.1| tyrosine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337572|gb|ABI68420.1| tyrosyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 438

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 111/416 (26%), Positives = 177/416 (42%), Gaps = 33/416 (7%)

Query: 11  ILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  RG + +I    EL          +  + A +G D TA  +H GH   L  L   Q 
Sbjct: 47  ELIRRG-VAEIIPEEELAQKLFRSIKEKRPLRAKLGLDPTAPDIHLGHTVVLNKLRQFQD 105

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   ++G  T  IGDPS + E+R+ +  +E+  N    +      +     +    +
Sbjct: 106 LGHEVHLIIGDFTGRIGDPSGKSETRKQLSEEEVMANAATYQEQIFKILD----REKTFI 161

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N +WL  +K  D+L   G + +V RML  +    R +    +   EF Y ++QAYD V
Sbjct: 162 HFNSSWLMQLKLADVLNLAGKY-TVARMLERDDFSKRYREGLPIGIHEFMYPLMQAYDSV 220

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGA 244
           EL       +++GG+DQ  N++ G +L          ALT P+L  T    KM K+L   
Sbjct: 221 ELR----ADVELGGTDQKFNLLVGRNLLREYGQEPQVALTMPILEGTDGVQKMSKSLGNY 276

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           I +N+     Y  +    +I D  +  + + LT +PM++I               +AK  
Sbjct: 277 IGVNE---EAYEMFGKTMSIPDELIARYFELLTRVPMNDIQGLQEDMNSGKLNPRDAKIR 333

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI  + H  EEAEKA       F      + +P I+ S+ EV     L   +     
Sbjct: 334 LAKEIIKIYHNEEEAEKAEEKFRLVFSQRDIPEDIPVITSSEREV----WLPKFLHDNSM 389

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST++ RR +K  A+K+N      E L ++         + L  G++      L 
Sbjct: 390 VNSTSDGRRMIKQGAVKVNGEKYQEENLLLQDT-------MVLQVGRRKFCRLRLS 438


>gi|269798124|ref|YP_003312024.1| tyrosyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094753|gb|ACZ24744.1| tyrosyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 402

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 173/407 (42%), Gaps = 30/407 (7%)

Query: 18  IHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L       +     +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDP----EKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR   S+ +V RM+  +    R K  + +   EF Y ++Q +D V L     
Sbjct: 131 ESMNFADVLRLASSY-TVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALH---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++  
Sbjct: 186 ADVEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIGIDE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T + + + + M K          +AK  +A  I  
Sbjct: 244 -EPKEMYGKAMSIPDELMMRYFMLVTDMSIEDQEDMTKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  ++     +  + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRAMPTDIPEYAMDAP--TEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K+ A K+N    S E + ++         + L  GK+  +   
Sbjct: 361 RRSIKAGAFKVNGEKYSEENITLEDG-------MILQVGKRKFLKIK 400


>gi|319956609|ref|YP_004167872.1| tyrosyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419013|gb|ADV46123.1| tyrosyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 400

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 192/426 (45%), Gaps = 37/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           MP  K   +  + ERG   +I +   ++ L      +       +G D TA  LH GH  
Sbjct: 1   MPVVK--AMREI-ERGT-AEIIDRERIESLVRNYYENGTPYKVKLGLDPTAPDLHLGHTV 56

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  L   QK G     L+G  T++IGDP+ + E+R+++  + +++N +  +      + 
Sbjct: 57  ILQKLAAFQKHGAIVQLLIGDFTAMIGDPTGKSETRKVLDRETVKQNAQTYQEQAFKILD 116

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    ++ N TWL      D L ++ + ++V RML  +    R K  QS++  EF 
Sbjct: 117 P----EKTELMFNSTWL-DALGADGLIQLTTQYNVARMLERDDFEKRFKSGQSIAISEFL 171

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-AS 233
           Y +LQ YD V +    +  +++GG+DQ  N++ G  L        +   L  P+L     
Sbjct: 172 YPLLQGYDSVAM----ESDIELGGTDQKFNLLMGRHLQRAYGVGKEQAVLMMPILEGLDG 227

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   + +++     Y       +I D  +  + + L++  + EI+ M K   +
Sbjct: 228 VQKMSKSLGNYVGISEPAKEIYA---KILSISDELMWRYYELLSSRSLEEIEEMKKQVAE 284

Query: 294 ---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                  AK+++A EIT   H  EEA+KA  A    F      + +P +++       G+
Sbjct: 285 GTLHPKRAKELLALEITARFHNEEEAQKAKEAFDSLFKARQIPEDIPEVTL-----EPGV 339

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +   +V AG   S ++ARR +K  A++I+   +S+E+L ++       G   L  GK+ 
Sbjct: 340 WICKALVDAGLEPSNSQARRDIKQGAVRIDQEKVSDEQLTLEP------GEYILQVGKRK 393

Query: 411 HIICHL 416
                +
Sbjct: 394 FARAKV 399


>gi|121603419|ref|YP_980748.1| tyrosyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120592388|gb|ABM35827.1| tyrosyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 410

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 104/410 (25%), Positives = 173/410 (42%), Gaps = 30/410 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I        L         +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 24  RGCDELIPQDEWTRKLVRSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHTV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  +  ++I+ N E      S  +          +  N  
Sbjct: 84  IFLIGDFTSLIGDPSGRNSTRPPLTPEQIKVNAETYYRQASLVLDPA----KTEIRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W C       + ++ S ++V RM+       R K  QS+S  EF Y ++Q YD V L   
Sbjct: 140 W-CDPLGARGMIQLASRYTVARMMERNDFHDRFKAGQSISVHEFLYPLMQGYDSVALK-- 196

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L +         LT PLL    G  KM K+ +  I +++
Sbjct: 197 --SDLELGGTDQKFNLLMGRHLQQEYGQEPQCILTMPLLEGLDGIEKMSKSKNNYIGISE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           +  S +       +I D  +  +   L+    ++I   +     G+   +AK  +A EIT
Sbjct: 255 DANSMFAKV---LSISDVLMWKWYTLLSFKSEADIAALKAEIEAGRNPKDAKVALAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A    +           +P +S+S       +G+  L+  AG A S +E
Sbjct: 312 ARFHSAAAADAAEQDFIN-RSKGGVPDEIPDVSLS----GAPLGIGALLKAAGLAPSGSE 366

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R +    +++++S++S++ L++        G   +  GK+      L 
Sbjct: 367 ASRLIDGGGVRVDSSVVSDKALKLAA------GTYVVQVGKRKFARVTLA 410


>gi|146281152|ref|YP_001171305.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145569357|gb|ABP78463.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|327479307|gb|AEA82617.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 399

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 163/417 (39%), Gaps = 26/417 (6%)

Query: 5   KSDFLSIL--SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
                  L   +RG    +     +  L     +    G+D TA  LH GH   +  +  
Sbjct: 1   MKSVQEQLSVIKRGADEVLVESELVAKLERGEPLRVKAGFDPTAPDLHLGHTVLINKMRQ 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GH+ + L+G  T +IGDPS +  +R  +   ++ EN E  K      +        
Sbjct: 61  LQELGHQVVFLIGDFTGMIGDPSGKSATRPPLTRDQVLENAETYKAQVFKILDPA----R 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N TW+           + S ++V RML  +    R    Q ++  EF Y ++Q Y
Sbjct: 117 TEVAFNSTWM-DQLSPADFIRLASQYTVARMLERDDFSKRYSTNQPIAIHEFLYPLVQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTL 241
           D V L       +++GG+DQ  N++ G +L      P    +T PLL    G  KM K+L
Sbjct: 176 DSVALK----ADIELGGTDQKFNLLMGRELQRAYGQPSQCVVTMPLLEGLDGIKKMSKSL 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
              + + +    P   +    +I D+ +  + + L+     EI        +     + K
Sbjct: 232 GNYVGIQEA---PGVMYSKLVSIPDSLMWRYFELLSFRSEEEIAEFRSDVSRGANPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI    HG E A  A  +A          + +P I +      + M + +++ KA
Sbjct: 289 IKLAEEIVARFHGDEAAATAHRSAGNRMKDGELPEDLPQIDLVS---EQDMPIASVLNKA 345

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G   +   AR  L S  ++++   + +         F+         GKK+     L
Sbjct: 346 GLVKNAAMARDLLGSGGVRVDG-KVVDRDFV-----FELGATHVCQAGKKSFARVSL 396


>gi|168183056|ref|ZP_02617720.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|237794488|ref|YP_002862040.1| tyrosyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673865|gb|EDT85826.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|229260524|gb|ACQ51557.1| tyrosine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 400

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/406 (26%), Positives = 183/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L    +
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSL----N 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N+  
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ ++    + +     + K  +A EI  
Sbjct: 244 -DANDIYGKVMSIPDGMIVKYYELATDIHPDEVAKIKARLEEEKVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG+E + KA       F      + + TI ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHGKEASTKAEANFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|294791997|ref|ZP_06757145.1| tyrosine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457227|gb|EFG25589.1| tyrosine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 402

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/407 (24%), Positives = 175/407 (42%), Gaps = 30/407 (7%)

Query: 18  IHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L       +     +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDP----EKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR   S+ +V RM+  +    R K  + +   EF Y ++Q +D V L     
Sbjct: 131 ESMNFADVLRLASSY-TVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALH---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++  
Sbjct: 186 ADVEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIGIDE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T + + E + MAK          +AK  +A  I  
Sbjct: 244 -EPKEMYGKAMSIPDELMMRYFMLVTDMSIEEQEDMAKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  ++     +  + +      AG   S  EA
Sbjct: 303 LYHGEEAAFEAEEEFKRVFQQRAMPTDIPEYAMDAP--TEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K+ A K+N    + E L+++         + +  GK+  +   
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLKLEDG-------MIVQVGKRKFVKIK 400


>gi|282850352|ref|ZP_06259731.1| tyrosine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579845|gb|EFB85249.1| tyrosine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 402

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/407 (24%), Positives = 173/407 (42%), Gaps = 30/407 (7%)

Query: 18  IHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L       +     +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDP----EKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR   S+ +V RM+  +    R K  + +   EF Y ++Q +D V L     
Sbjct: 131 ESMNFADVLRLASSY-TVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALH---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++  
Sbjct: 186 ADVEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIGIDE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T + + E + MAK          +AK  +A  I  
Sbjct: 244 -EPKEMYGKAMSIPDELMMRYFMLVTDMSIEEQEDMAKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P   +        + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRAMPTDVPEYVMVAPI--EPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K+ A K+N    + E L+++         + +  GK+  +   
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLKLEDG-------MIVQVGKRKFVKIK 400


>gi|319795927|ref|YP_004157567.1| tyrosyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315598390|gb|ADU39456.1| tyrosyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 402

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 174/414 (42%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 12  EISLRGADELLPQDEWVRKLQRSEATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          + 
Sbjct: 72  GHRVIFLIGDFTSTIGDPSGRNNTRPPLTREQIEANAQTYYKQASLVLDP----EKTEIR 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + ++V RM+  +    R K  QS+S  EF Y ++Q YD V 
Sbjct: 128 YNSEW-SDPLGARGMIQLAAKYTVARMMERDDFNKRFKAGQSISVHEFLYPLMQGYDSVA 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +         LT PLL       KM K+    I
Sbjct: 187 LK----SDLELGGTDQKFNLLVGRHLQQEYGQEPQCILTMPLLEGLDGVEKMSKSKHNYI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            ++++  + +       +I D  +  +   L+   + +I+  +     G+   +AK  +A
Sbjct: 243 GISEDANTMFAKV---LSISDDLMWRWYTLLSFQSLEQIEALKAEIAGGRNPKDAKVALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    AE A    +           +P +S+S       +G+  L+ +A  A+
Sbjct: 300 KEITARFHSAAAAETAEQDFVN-RSKGGVPDEIPEVSLS----GAPLGIGQLLKQANLAS 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S  +  R +    +++++ +IS++ L++        G+  +  GK+      L 
Sbjct: 355 SAGDGNRLIDGGGVRVDSVVISDKGLKLPA------GSYVVQVGKRKFARVTLS 402


>gi|170756305|ref|YP_001780828.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169121517|gb|ACA45353.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 400

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 181/406 (44%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKNKLEKSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L     
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLK---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N+  
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ +M    + +     + K  +A EI  
Sbjct: 244 -DANDIYGKVMSIPDGMIVKYYELATDIHPDEVAKMKARLEEENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASIKAEENFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|257455122|ref|ZP_05620360.1| tyrosyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447455|gb|EEV22460.1| tyrosyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 406

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 177/409 (43%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    IS    +  L     +    G+D TA  LH GH   +  L   Q  GH+ +
Sbjct: 17  LIQRGTHEIISQDDLIKKLKENRPLRVKAGFDPTAPDLHLGHTVLINKLKHFQDLGHQVL 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T+ IGDP+ ++ +R  +  ++I EN +  K      +          ++ N  W
Sbjct: 77  FLIGDYTARIGDPTGKNTTRPPLSEEKILENAQTYKEQVFKILDPA----KTQVMFNSDW 132

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++  + S  +V+RML  +    R   +  +S  EF Y ++Q YD V +    
Sbjct: 133 FSKMSAGDMI-GLASQQTVSRMLERDDFSKRYHSQTPISIHEFLYPLVQGYDSVAMQ--- 188

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L  R        +T P+L       KM K+L   I +   
Sbjct: 189 -ADVELGGTDQTFNLLMGRTLQSRYGQVPQVCITVPILEGLDGVQKMSKSLGNYIGIYDS 247

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITT 308
             S Y   Q   ++ D  +  + + L+  PM E++ + K      N  E K+I+A E+  
Sbjct: 248 AGSMY---QKILSMPDTLIARYFELLSFKPMDEVEALLKDIENGRNPQEVKRILALELIE 304

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H +E AE A  +A            +P ++IS  +    + +  ++ +A    ++ +A
Sbjct: 305 RFHDKEAAENAHKSAGNRLVEGELPVDLPEVTISL-DGQAQLFITQVLNQANLVKNSAQA 363

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  LK+ ++K++  ++ +    +          + +  GKK +    + 
Sbjct: 364 KDFLKNQSVKVDGQVV-DAGFALTA-----GQTVVIQAGKKAYAKVTIS 406


>gi|297183455|gb|ADI19587.1| tyrosyl-tRNA synthetase [uncultured Acidobacteria bacterium
           HF0770_27F21]
          Length = 407

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/415 (22%), Positives = 167/415 (40%), Gaps = 29/415 (6%)

Query: 11  ILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L   G +  + +   L+            +   +G+D +A+ +H GH   +  +   Q 
Sbjct: 12  ELLRHGAV-DLISEEGLEKKLERSQATGKPLIVKVGFDPSAADIHLGHTVVIRKMKQFQD 70

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ + ++G  T++IGDPS +  +R  +   E++EN E  +      +        + +
Sbjct: 71  LGHQVVFVVGDFTAMIGDPSGKSATRPQLTRGEVRENAETYRQQAFKILSSD----KSRL 126

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N TWL  +       E+   ++V RML  +    R    Q +   E  Y + QAYD V
Sbjct: 127 EFNSTWLEDLGA-GGFIELAGKYTVARMLERDDFEKRFNNNQPIGVHELLYPLAQAYDSV 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGA 244
            L    +  ++MGG+DQ  N++ G  +           LT PLL  T    KM K+L   
Sbjct: 186 VL----EADVEMGGTDQLFNLLVGRSIMREYGQEPQAVLTLPLLVGTDGVEKMSKSLGNY 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKI 301
           I +     +P   +    +I D  + S+ +  T+LP  +I+ +             AK+ 
Sbjct: 242 IAVE---DTPKEMFGKVMSISDELMWSYYELCTSLPAEQIEVIRSQVGSGDLHPKAAKQR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++  I    HG E A  A       F        +        E      ++ ++ + GF
Sbjct: 299 LSRIIVADFHGEEAAAGALEEFDNIFREGGLPDDITGHGFDGAE---PAWIIQVMRECGF 355

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A+S  EARR L   A+ ++   I++++  +     +      L  GK+      +
Sbjct: 356 ASSNGEARRLLAQGAVSLDGERITSDEAMVP----NDGNERILKVGKRRFARVKV 406


>gi|58697387|ref|ZP_00372710.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536210|gb|EAL59772.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 352

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 188/349 (53%), Positives = 258/349 (73%), Gaps = 2/349 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD L      + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IKYID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKYIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           E+T + HG +EAE A  AA+  F+ +  S  +P   I K++V+ G+ L+
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFE-NEDSSLLPDYIIKKEQVASGISLV 352


>gi|166710378|ref|ZP_02241585.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 403

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 97/423 (22%), Positives = 163/423 (38%), Gaps = 28/423 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M          L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  
Sbjct: 1   MTTLDESL--ALIGRGA-EEILKLDQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     
Sbjct: 58  MRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILD---- 113

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +    +  N  W   +   D+++      +V RML  +    R   +Q ++  EF Y ++
Sbjct: 114 RERTEVRFNSEWFGQMSAADMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLV 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD V L       +++GG+DQ  N++ G  L E         LT PLL       KM 
Sbjct: 173 QGYDSVALK----ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMS 228

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKE 294
           K+L   I +N+      +       I D     +   L+          +          
Sbjct: 229 KSLGNYIGINEP---AIDIVTKTMKIGDELTWRWIDLLSFDISVAEAVRLKEQVTSGELH 285

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             E K  +A E+ T  H    AE+A             +  +P   +     + G+ + +
Sbjct: 286 PREVKLRLARELATRFHDAVTAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRIAS 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  AG   S +EA R LK  A+KI+  ++ +         F       +  GK+N    
Sbjct: 344 LLTAAGLTPSNSEATRKLKERAVKIDGEVLEDATRV-----FTQGFEGVIQVGKRNFARV 398

Query: 415 HLC 417
            L 
Sbjct: 399 SLV 401


>gi|92115165|ref|YP_575093.1| tyrosyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|91798255|gb|ABE60394.1| tyrosyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 398

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 88/409 (21%), Positives = 173/409 (42%), Gaps = 23/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L S   +    G+D TA  LH GH   L  +   Q+ GH+ +
Sbjct: 10  LLKRGTHEILLEDELVKKLESGRKLRIKAGFDPTAPDLHLGHSVLLTKMRQFQELGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T  IGDP+ ++ +R+ +   E++ N E  K      +          +  N  W
Sbjct: 70  FLIGDFTGRIGDPTGKNVTRKPLTEAEVKANAETYKEQVFKILDPAL----TEVRFNAEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D++  + +  +V RML  +    R    QS+S  EF Y ++Q YD V L    
Sbjct: 126 MSKLSAADMIE-LAAQSTVARMLERDDFEKRYTANQSISIHEFLYPLVQGYDSVAL---- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G ++ +         +T PLL       KM K+L   + ++  
Sbjct: 181 EADIELGGTDQKFNLLMGREIQKHFGQAPQVVMTMPLLEGLDGVQKMSKSLGNYVGVD-- 238

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    ++ D+ +  + + L+     EI+  R +   G    + K  +A E+  
Sbjct: 239 -DTPGVMFNKLVSMPDSLMWRYFELLSLKSNDEIEKIRRSIESGANPRDIKMELARELIA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P + ++ +       +  ++ ++G   ++ +A
Sbjct: 298 RYHGEEAAANAHKSAGNQLAEGELPDDLPDVEVAFE--GEQAPIAAVLNRSGLTNNSAQA 355

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  L +  +K++  +++      K     +     +  GKK +    L 
Sbjct: 356 KDMLSNGRVKVDGEVVA------KDAMLATGQRYVIQAGKKRYARVTLV 398


>gi|124268334|ref|YP_001022338.1| tyrosyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124261109|gb|ABM96103.1| tyrosyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 424

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 172/409 (42%), Gaps = 30/409 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     L  L         +   +G D TA  +H GH   L  +  LQ  GH+ 
Sbjct: 38  RGCDELLPQDDWLQKLARSNATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQV 97

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +      +   +  N  
Sbjct: 98  IFLIGDFTSMIGDPSGRNATRPPLTREQIESNAQTYYRQASLVLDP----SKTEIRYNSE 153

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W         + ++ S +++ RM+  +    R K    +S  EF Y ++Q YD V L   
Sbjct: 154 W-SDPLGARGMIQLASRYTIARMMERDDFTKRFKAGVPISVHEFLYPLMQGYDSVALK-- 210

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL       KM K+ +  I + +
Sbjct: 211 --SDLELGGTDQKFNLLVGRQLQAEYGQEPQCILTMPLLEGLDGVEKMSKSKNNYIGITE 268

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
              S +       +I DA +  +   L+    +EI   +     G+   +AK ++A E+T
Sbjct: 269 PANSMFAKM---LSISDALMWKYFTLLSFRSEAEIAALKAEVDAGRNPKDAKVLLAKEVT 325

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  H    AE A           +    +P ++++       +G+ TL+ +A   TS +E
Sbjct: 326 TRFHDAAAAEAAEADFQNRAKGGVP-DELPDVALA----GAPLGIGTLLKQANLVTSGSE 380

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             R ++   ++I+   IS++ L+++       G   +  GK+      L
Sbjct: 381 GLRMVEQGGVRIDGVAISDKGLKLEA------GTYVVQVGKRKFARVTL 423


>gi|332968312|gb|EGK07384.1| tyrosine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 411

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 173/409 (42%), Gaps = 21/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG     S    +  L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 21  IIKRGTYEIFSEEDLIAKLKLGRPLKIKAGFDPTAPDLHLGHTVLINKLKHFQDLGHEIY 80

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T+ IGDPS ++ +R  +  +++  N +         +          ++ N  W
Sbjct: 81  FLIGDYTAKIGDPSGKNSTRPPLTDEQVLANAKTYAEQVFKILDKD----KTKVVFNSQW 136

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L    
Sbjct: 137 FNEMSAGDMI-QLASQLTVSRMLERDDFAKRYASQTPIAIHEFLYPLVQGYDSIAL---- 191

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  ++MGG+DQ  N++ G  L  R        +T P+L       KM K+L   + +   
Sbjct: 192 EADVEMGGTDQTFNLLMGRTLQGRYGHEAQVCITVPILEGLDGVNKMSKSLGNYVGIE-- 249

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITT 308
             +P   +Q   ++ D  +  + + L+  PM E+D +        N  E K+I+A E+  
Sbjct: 250 -DAPGVMFQKILSMPDTLIHRYFEFLSFKPMEEVDALMAEMENGRNPQEIKRILAEELIE 308

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H +E AE A  +A            +P +++  +     + +  ++ +A  A ++  A
Sbjct: 309 RFHDKEAAENAHKSAGNVLADGELPVDLPEVTLELEAGQEALFITQILNQADLAKNSAAA 368

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  LK NA+K++   + N    +      S   + +  GKK      + 
Sbjct: 369 KDMLKRNAVKVDGEEV-NAGFSLT-----SGQTVVIQAGKKAFAKVTIA 411


>gi|224372557|ref|YP_002606929.1| tyrosyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589484|gb|ACM93220.1| tyrosyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 417

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 100/393 (25%), Positives = 170/393 (43%), Gaps = 27/393 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
             L +    T   G+D TA  LH GH   L  L   QK G     L+G  T+ IGDPS +
Sbjct: 47  KYLQTGERFTIKAGFDPTAPDLHLGHTVLLQKLKTFQKYGATVQFLIGDFTAQIGDPSGK 106

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
             +R+M+   E+ +N E  K      +     + +  ++ N  WL +      + E+ + 
Sbjct: 107 SATRKMLTPDEVAKNAETYKEQVFKILD----RENTEVVFNSKWL-NALGAAGIVELTTT 161

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           ++V RML  +    R K +  ++  EF Y +LQ YD V L       +++GG+DQ  N++
Sbjct: 162 YTVARMLERDDFEKRFKSQTPIAISEFIYPLLQGYDSVALK----SDIEIGGTDQKFNLL 217

Query: 208 CGIDLGERLKT-PKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
            G  L +      +   +  PLL    G  KM K+L   I + ++   P   +    +I 
Sbjct: 218 MGRQLQKTYNVGKEQSVIMMPLLVGLDGINKMSKSLGNYIGITED---PNTIFAKVLSIS 274

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAA 323
           D  +  + + L+   + EI+ + +   + +N   AK+ +A EI    HG     KA    
Sbjct: 275 DELMWDWYELLSEKSLKEIEELKQKVKEGMNPKIAKEALAIEIVDRFHGEGAGIKAKEHF 334

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            +          +P   + +        ++  +V    A+S +EARRH+K  A++IN   
Sbjct: 335 DKVHKQGQIPDDIPEFELDE------QNIVDALVNTKLASSKSEARRHIKGGAVRINQEK 388

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           I ++ L +K     S     L  GK+      +
Sbjct: 389 IDDQNLILK-----SGEEYILQIGKRKFAKVKV 416


>gi|85057589|ref|YP_456505.1| tyrosyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789694|gb|ABC65426.1| tyrosyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 430

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 133/417 (31%), Positives = 208/417 (49%), Gaps = 16/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F   L  R  I   +N  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ 
Sbjct: 19  SFYEELKWRNLIKDCNNEIQVKELLDNNQVKFYCGFDPTSHSLTVGHLIQITMILLMQRQ 78

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T +IGDP    E R+++  +   +N + I+    + +           +
Sbjct: 79  GHLPVILVGGATGLIGDPKE-TEERKLLSLENSLQNAKSIESQLKTILLNKQ----VEFV 133

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  I  LR  G FF++N MLS   V  RL     +SF EF+YMILQ+ DF  
Sbjct: 134 NNYQWLSQIDIISFLRNYGKFFNINYMLSKHVVAKRL--ASGISFTEFSYMILQSLDFHH 191

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L KN+  RLQ+GGSDQWGNI  G+++  +L+       +++PLL  + GTK GK+    +
Sbjct: 192 LYKNHKVRLQLGGSDQWGNITSGLEIIRKLEKKSDALGVSTPLLLNSDGTKFGKSEKRVL 251

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WLN  MTSPY  +QY+ N+ D +V+++ K LT +P   I  + K   +  +   A+K + 
Sbjct: 252 WLNPLMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKKGILELEKKTLENPQKRLAQKALT 311

Query: 304 TEITTMVHG----REEAEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIV 357
             I  ++H     +E  +            S   +   +   ++    +   + L+  +V
Sbjct: 312 QSIINLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSIKEDILLVDALV 371

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +   ATS +EAR  +K N IK+ N  I +    I  ++      I L  GKKN+ + 
Sbjct: 372 QTKLATSKSEAREFIKDNTIKLFNQKIKSLDFIITKENTLFGKYILLKKGKKNNALI 428


>gi|300871541|ref|YP_003786414.1| tyrosyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300689242|gb|ADK31913.1| tyrosyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 398

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 172/408 (42%), Gaps = 27/408 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  RG    I      + L S   +T   G+D TA  +H GH   L  +   Q  GHK 
Sbjct: 13  ELITRGASEIIGLEEIKEKLKSGKKLTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHKV 72

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T  IGDPS + ++R  +  +++  N E  K      +         ++  N  
Sbjct: 73  IFLIGDFTGRIGDPSGKTKTRPRLSEEDVLRNAETYKQQVFKILDP----EKTIVEFNSK 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + + D+L  + S ++V +M+  +    R K  Q +S +EF Y + Q YD V L   
Sbjct: 129 WLGKMSFADVLG-LTSRYTVAQMIERDDFSKRYKNGQPISIMEFLYPLAQGYDSVSL--- 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +C +++GG+DQ  N++ G  L +         LT PLL       KM K+L   I +  
Sbjct: 185 -ECDVELGGNDQKFNLLVGRTLMKEYGLSPQAVLTVPLLEGLDGVEKMSKSLGNYIGVY- 242

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEIT 307
              SP + +    +I D  ++ + + +T +PM++I        +G+     K I+A EI 
Sbjct: 243 --DSPKDMYGKAMSIPDGLILKYMELVTDIPMNDIRNYKKAMEEGENPRNIKSILAKEIV 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  ++A  A       F        +  I + KD+      +L ++       S + 
Sbjct: 301 KLYHTEDDANNAEEEFKRIFSSKGVPDEIEEIVVGKDD-----NILNILSVCMKNESKSN 355

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +R +   ++ ++N  I++    I            L  GK+N     
Sbjct: 356 LKRLISQGSVTLDNEKITDINSNI-------NKEGILKVGKRNFFKIK 396


>gi|299529505|ref|ZP_07042942.1| tyrosyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722368|gb|EFI63288.1| tyrosyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 410

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 173/414 (41%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            ++ RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EVTLRGVDELLPKDEWVQKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDPS R+ +R  + +++I+ N E      +  +          + 
Sbjct: 80  GHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAETYYTQAAKVLDPA----RTEVR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +     + ++ + ++V RM+      +R     S+S  EF Y +LQ YD V 
Sbjct: 136 YNSEWCDQLGA-RGMIQLSAKYTVARMMERNDFHTRFTDGSSISLHEFLYPLLQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L       +   LT PLL       KM K+ +  I
Sbjct: 195 LK----SDLELGGTDQKFNLMMGRHLQAEYGQEQQCVLTMPLLVGLDGVHKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + ++  + +       +I D  +  +   L+   ++EI   +     G     AK  +A
Sbjct: 251 GITEDANTMFAKV---LSISDELMWDWYTLLSFKSLAEIAALKAEIEAGGNPKHAKVALA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H  E A+ A    +           +P IS+S       +G+  L+ +A  A 
Sbjct: 308 KEITARFHSAEAADAAEQDFIN-RSKGGIPDDIPEISLS----GAPLGIGALVKQANLAA 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST EA R +    ++++ ++IS+  L++        G   L  GK+      L 
Sbjct: 363 STGEANRLIDGGGVRVDGNVISDRALKL------DAGTFVLQVGKRKFARVTLS 410


>gi|83648875|ref|YP_437310.1| tyrosyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|115305807|sp|Q2S8Y9|SYY_HAHCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83636918|gb|ABC32885.1| tyrosyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 400

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 92/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP+ +      L +RG    I     ++ L     +    G+D TA  LH GH   +  L
Sbjct: 1   MPSVEESL--ALIKRGAEEIIQEEGLIEKLKRGEPLRIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T +IGDP+ +  +R  +  +++ +N +  K      +      
Sbjct: 59  RQFQDLGHQVIFLIGDFTGMIGDPTGKSATRPPLTKEDVAQNAQTYKEQVFKILDPK--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+  +   D++  +   ++V RML  +    R   EQS+S  EF Y ++Q
Sbjct: 116 -KTEVRFNSEWMDKLSAADMI-RLAGQYTVARMLERDDFHKRYHGEQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G  L +         +T P+L       KM K
Sbjct: 174 GYDSVALR----ADVELGGTDQKFNLLMGRMLQKHYDQEPQVIMTMPILEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--E 297
           +L   I +N     P   +    +I D  +  + + L+   M+EI+          N   
Sbjct: 230 SLGNYIGVNDL---PGEMFGKLLSIPDELMWRYFELLSFRDMAEIEDFKVQVNAGENPQN 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+++A EI    HG E A+ A  +A     +    +++P + + + +      +  ++ 
Sbjct: 287 IKRLLAEEIVARFHGGEAAQSAHKSAGNQVKLGEIPENVPVVHLEESDDQTEFSISYILR 346

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +A    +   A+  L   A+ ++ + + +    ++           +  GKK     
Sbjct: 347 RADLVKNGAAAKDVLGRGAVFVDGAQV-DPSFMVQR-----GSEHVIQAGKKKIAQI 397


>gi|91202965|emb|CAJ72604.1| strongly similar to tyrosyl-tRNA ligase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 404

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 98/422 (23%), Positives = 183/422 (43%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQ 56
           MP   ++ + IL  RG +  +S    +  +      +  +   +G D TA  +H G+   
Sbjct: 1   MPKDVNEQMEILL-RGTVDIVSKGELIKKIDRSMQEKRPLRVKLGLDPTAPDIHIGNAIP 59

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           +  L   Q  GH  I ++G  T+++GDPS  +++R M+   ++ EN +         +  
Sbjct: 60  IHKLRAFQSLGHTAILIIGDYTAVVGDPSGVNKTRPMITHDKVLENAKTYLTQAGKILDM 119

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   ++ N  W  S+ + D+++ +    +V RM+  +    R K    +S  EF Y
Sbjct: 120 D----KTEVVYNSKWFKSMTFNDVIQLVSKM-TVARMMERDDFSKRYKAGSPISLHEFIY 174

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT 235
            ++Q YD + +  +    +++GG+DQ  +++ G DL +         LT+ LL       
Sbjct: 175 PLMQGYDSIMVKND----VELGGTDQLFSLLVGRDLQKDAGMEPQVVLTTSLLEGIDGNK 230

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KM K+L+  I + +        +    +I D  +  + +  T + + +I ++   +    
Sbjct: 231 KMSKSLNNYIGITEPS---REMFGKVMSIPDNLMRKYFELATDVSIEDIQQLL-DEKTHP 286

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLT 354
             AK  +A  I T  H  + AE AA      F        +P ISI   E+  G + +  
Sbjct: 287 RTAKVALAKAIVTRYHNLQAAEAAAEEFDRVFKEGALPDEIPIISIPDGELENGKIWITK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           LIV   FA +  EARR ++   + +N+  I++  L I++        + L  GK+     
Sbjct: 347 LIVSCKFAATNGEARRLIQQGGVSVNSETINDPTLNIEIT-----PGMTLKVGKRRFAKI 401

Query: 415 HL 416
            L
Sbjct: 402 VL 403


>gi|329350575|gb|AEB91324.1| tyrosyl-tRNA synthetase [Sporolactobacillus sp. P3J]
          Length = 388

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 130/383 (33%), Positives = 196/383 (51%), Gaps = 15/383 (3%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  S+H GHL   M++   +  GH P  L+GG T  IGDPS R   R++   +++  N+
Sbjct: 9   PTGDSMHIGHLIPFMMMKRFELAGHHPYILIGGATGSIGDPSGRKTERQLQAMEKVNHNV 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           + +            G  +  M+NN  WL  +  +D LR+ G   +VN ML+ + V SRL
Sbjct: 69  KALSAQMKRLF---GGDANVTMVNNYEWLSKVSLLDFLRDYGKVVNVNTMLAKDIVASRL 125

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKL 221
             E  +S+ EF Y ILQ+ DF+ L + +  +LQ+GG+DQWGNI  GID+  +++    + 
Sbjct: 126 --EDGISYTEFTYQILQSVDFLTLHRVHHVQLQIGGADQWGNITSGIDMIHKIEGSDTEA 183

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           + LT PL+  A GTK GKT  GAIWL+ + TSPY F+Q+W N DD DVV   K  T L  
Sbjct: 184 YGLTIPLMLKADGTKFGKTAGGAIWLDPKKTSPYEFYQFWLNQDDRDVVKNLKFFTFLSQ 243

Query: 282 SEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
            EI           E  EA++ +A E+T  VHG+E   KA   +   F   I    +  I
Sbjct: 244 DEIGELAQKVETEPEKREAQRRLAEEVTRFVHGQEAMNKAEKISDTLFSGDIKDLSVAEI 303

Query: 340 SISKDEV------SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             + + V      S    ++  +V      S  +AR  L + A+ IN   ++N + ++  
Sbjct: 304 QEAFERVPNVKVSSEPKNIVEWLVDTKIEPSKRQAREDLINGAVTINGDRVTNVEAEVNP 363

Query: 394 QDFDSTGNIKLSFGKKNHIICHL 416
            D  +   I +  GKKN+ +  +
Sbjct: 364 ADHYAGKFIVVRKGKKNYFLARV 386


>gi|97197487|sp|Q2NJG7|SYY_AYWBP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 413

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 133/417 (31%), Positives = 208/417 (49%), Gaps = 16/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F   L  R  I   +N  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ 
Sbjct: 2   SFYEELKWRNLIKDCNNEIQVKELLDNNQVKFYCGFDPTSHSLTVGHLIQITMILLMQRQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T +IGDP    E R+++  +   +N + I+    + +           +
Sbjct: 62  GHLPVILVGGATGLIGDPKE-TEERKLLSLENSLQNAKSIESQLKTILLNKQ----VEFV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  I  LR  G FF++N MLS   V  RL     +SF EF+YMILQ+ DF  
Sbjct: 117 NNYQWLSQIDIISFLRNYGKFFNINYMLSKHVVAKRL--ASGISFTEFSYMILQSLDFHH 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L KN+  RLQ+GGSDQWGNI  G+++  +L+       +++PLL  + GTK GK+    +
Sbjct: 175 LYKNHKVRLQLGGSDQWGNITSGLEIIRKLEKKSDALGVSTPLLLNSDGTKFGKSEKRVL 234

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WLN  MTSPY  +QY+ N+ D +V+++ K LT +P   I  + K   +  +   A+K + 
Sbjct: 235 WLNPLMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKKGILELEKKTLENPQKRLAQKALT 294

Query: 304 TEITTMVHG----REEAEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIV 357
             I  ++H     +E  +            S   +   +   ++    +   + L+  +V
Sbjct: 295 QSIINLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSIKEDILLVDALV 354

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +   ATS +EAR  +K N IK+ N  I +    I  ++      I L  GKKN+ + 
Sbjct: 355 QTKLATSKSEAREFIKDNTIKLFNQKIKSLDFIITKENTLFGKYILLKKGKKNNALI 411


>gi|289724829|gb|ADD18356.1| tyrosyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 446

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 130/432 (30%), Positives = 207/432 (47%), Gaps = 28/432 (6%)

Query: 12  LSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ER F   +   +   ++  +      T Y G+D TA SLH G+L  +M L   Q+ GH
Sbjct: 12  LTERDFFQDLFPDTARPQITKIFENSSQTIYAGFDPTAESLHVGNLLVIMGLLHFQRAGH 71

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI----FSSFIKYGTGKTDAL 124
            PI+L+GG T++IGDPS R   R  ++   +Q N+E IK      F +   +        
Sbjct: 72  HPIALLGGATALIGDPSHRKTERSQLKKSLVQRNLEAIKHQLMRIFENHQNFLWDDKRHQ 131

Query: 125 M-------LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                   +NN  W  ++  ID + + G  F + +MLS  SV+SRL+ E  +SF EF Y 
Sbjct: 132 RPLPQLRIVNNAEWYENLNIIDFISQNGRHFRLGQMLSRTSVQSRLEAEGGMSFAEFTYQ 191

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTK 236
             QAYD++ L +NY+CR Q+GGSDQ GN++ G +L  R +   ++F LT P++T   G K
Sbjct: 192 AFQAYDWLHLLRNYNCRFQLGGSDQMGNLMSGHELISRTEAKTEVFGLTLPIITNEEGDK 251

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KE 294
            GK+   A+WL++E TS +  +Q++    DA+V    K  T L + EI+++        E
Sbjct: 252 FGKSGGTAVWLDQEKTSAFALYQFFIRRPDAEVEKLLKLFTFLSLPEIEKLMSEHRKEPE 311

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKD 344
             +A+ I+A ++T +VHG    ++A       +                Q +   ++ + 
Sbjct: 312 KRKAQTILAEDVTLLVHGENGLKQAERITNALYKGQVEGLAELNCGEVQQTLNGATLVEL 371

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIK 403
                + +L L +KA    +  +A R + +    IN     N    I         G   
Sbjct: 372 LAEPDITILQLAMKAKCFPTEADAVRIITAGGFYINQKRSQNIAEIISHGIHVLRNGLTI 431

Query: 404 LSFGKKNHIICH 415
           L  GK+N  I  
Sbjct: 432 LRVGKRNFYIVR 443


>gi|312134760|ref|YP_004002098.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774811|gb|ADQ04298.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 396

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 188/408 (46%), Gaps = 28/408 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ++G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I +
Sbjct: 11  KKGAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILI 70

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +          +  N  WL 
Sbjct: 71  IGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQVLKILDPK----KTTVRYNSEWLE 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + ++D++  + S ++V RML  E+ + R+++   LS  EF Y ++Q YD V +    + 
Sbjct: 127 PMNFLDVI-NLASKYTVARMLERETFKQRMEKNLPLSIHEFFYPLMQGYDSVVI----EA 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            +++G ++Q  NI+ G  L +       ++  L   L+ T    KM K+L   I +N+  
Sbjct: 182 DVELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINEP- 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++S+ +  T L   EI+ M +   +      +AK  +A EI  
Sbjct: 241 --PNIMYGKVMSIPDEIMISYYELTTDLEPEEIEEMKRKLEEGTLHPRDAKMRLAREIVK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A    ++ F       ++P + +   +V     L   +V+    +ST+E 
Sbjct: 299 LYHGEEAAIRAEEEFIKVFQKKDIPDNIPEVELQSSKVY----LPRFMVENKLCSSTSEG 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R +KS A+K+N   +++  ++++  D        L  GK   +   L
Sbjct: 355 MRLIKSGAVKLNGEKVNDLDIELQNGD-------VLQVGKLKFVKVKL 395


>gi|237807358|ref|YP_002891798.1| tyrosyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499619|gb|ACQ92212.1| tyrosyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 399

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 98/421 (23%), Positives = 178/421 (42%), Gaps = 26/421 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    I  +RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSELETALAEI--KRGAEEILVEEELIAKLKEGRPLRIKLGMDPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+++GDPS ++ +R  +  + I+ N           +      
Sbjct: 59  RTFQDLGHEVILLIGDFTALVGDPSGKNATRPPLSEEAIKINALTYAEQAFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    +++ + +  +V RML  +  + R    QS++  EF Y +LQ
Sbjct: 116 -RTRIEYNSTWLKELGATGMIK-LAAKQTVARMLERDDFKKRYANGQSIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L +    P    L  PLL       KM K
Sbjct: 174 GYDSVALK----ADVELGGTDQKFNLLMGRELQKDAGQPAQCVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEIN 296
           +    I ++    +P + +    +I D  + S+ + L+T P++E                
Sbjct: 230 SSGNYIGVH---DAPNDMFGKIMSISDELMWSYYELLSTRPLAEITQFKADIAANKLNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A E+    H    AE A     + F  +     MP ++++    + G+ +  L+
Sbjct: 287 DVKIWLAKELIARYHDEAAAEAAHNDFTQRFSKNAIPDEMPEVTVAAP--AEGIAVGNLL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +A    +T+EA R +K NA+K +  ++++ KL +        G      GK+      +
Sbjct: 345 KEAALVETTSEALRMIKQNAVKRDGEVVADGKLLVTA------GTAVWQVGKRKFARITV 398

Query: 417 C 417
            
Sbjct: 399 A 399


>gi|264676689|ref|YP_003276595.1| tyrosyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207201|gb|ACY31299.1| tyrosyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 410

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            ++ RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EVTLRGVDELLPKDEWVQKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDPS R+ +R  + +++I+ N E      +  +          + 
Sbjct: 80  GHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAETYYTQAAKVLDPA----RTEVR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+      +R     S+S  EF Y +LQ YD V 
Sbjct: 136 YNSEWCDQLGARGMI-QLSAKYTVARMMERNDFHTRFTDGSSISLHEFLYPLLQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L       +   LT PLL       KM K+ +  I
Sbjct: 195 LK----SDLELGGTDQKFNLMMGRHLQAEYGQDQQCVLTMPLLVGLDGVHKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + ++  + +       +I D  +  +   L+   ++EI   +     G     AK  +A
Sbjct: 251 GITEDANTMFAKV---LSISDELMWDWYTLLSFKSLAEIAALKAEIEAGGNPKHAKVALA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H  E A+ A    +           +P IS+S       +G+  L+ +A  A 
Sbjct: 308 KEITARFHSAEAADAAEQDFIN-RSKGGIPDDIPEISLS----GAPLGIGALVKQANLAA 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST EA R +    ++++ ++IS+  L++        G   L  GK+      L 
Sbjct: 363 STGEANRLIDGGGVRVDGNVISDRALKL------DAGTFVLQVGKRKFARVTLS 410


>gi|285017200|ref|YP_003374911.1| tyrosyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283472418|emb|CBA14923.1| probable tyrosyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 403

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 165/422 (39%), Gaps = 26/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +      L  RG    +        L S   +    G+D TA  LH GH   L  L
Sbjct: 1   MSVIEESL--ALIGRGADEILKQEALEARLRSGRPLRVKAGFDPTAPDLHIGHTVLLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +E+  N    +      +      
Sbjct: 59  RQFQQLGHQVIFLIGDFTGMIGDPTGKNATRKPLTREEVLANARTYEEQVFKVLDRA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W   +   D++R  G   +V RML  +    R   +QS++  EF Y ++Q
Sbjct: 116 -RTEVRFNSEWFGQMSAADMIRLAGQH-TVARMLERDDFTKRYAAQQSIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G  L E    P    LT PLL       KM K
Sbjct: 174 GYDSVALK----ADVELGGTDQKFNLLMGRGLQEHYGQPAQIVLTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK----EI 295
           +L   I +N+      +       I D  +  + + L+        +M + Q +      
Sbjct: 230 SLGNYIGINEP---AIDIVTKTMKIGDDLMWRWIELLSFDIGLNEAQMLRQQVQAGSLHP 286

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E K  +A E+ T  H    AE+A             +  +P   +     + G+ +  L
Sbjct: 287 REVKLRLARELATRFHDAVAAEQAIIGWHAVVTGQGDTSVLPLQQLVVP--ADGVRIAAL 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  AG   S +EA R LK  A+++   ++ + +               L  GK+      
Sbjct: 345 LTAAGLTASNSEATRKLKERAVRVAGEVVEDPQHSFTP-----GFEGVLQVGKRTFARVQ 399

Query: 416 LC 417
           L 
Sbjct: 400 LV 401


>gi|116328275|ref|YP_797995.1| tyrosyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331000|ref|YP_800718.1| tyrosyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121019|gb|ABJ79062.1| Tyrosine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124689|gb|ABJ75960.1| Tyrosine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 405

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 99/413 (23%), Positives = 177/413 (42%), Gaps = 26/413 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            +  RG +  IS       L  +  +    G+D TA  LH GH  QL  L   Q  GH+ 
Sbjct: 8   EIIRRGTVDLISEDELKSKLQKKKALKIKAGFDPTAPDLHLGHFVQLKKLKHFQDLGHEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ + E+R+ +  +E+ EN +  +      +          ++ N +
Sbjct: 68  FFLLGDFTAMIGDPTGKSETRKRLSKEEVLENSKTYQSQVFKVLDPA----KTRIVYNSS 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   + + + +  + S ++V RML  +    R K    +S +EF Y ++Q YD V +   
Sbjct: 124 WCSGMNF-EDVLVLSSKYNVARMLERDDFNKRYKAGHPISMIEFLYPLVQGYDSVAM--- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +C +++GG+DQ  N++ G DL           LT PLL       KM K+L   + + +
Sbjct: 180 -ECDVELGGTDQKFNLLVGRDLQREYGKEVQCVLTLPLLVGLDGNKKMSKSLGNYVGITE 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEI 306
               P + +    +I D  + ++ + LT LP+SEI+        +     E K  +A  I
Sbjct: 239 V---PIDMFGKLMSISDDLMWNYFELLTDLPLSEIEVRKNGIVNKELHPKEVKIELAKLI 295

Query: 307 TTMVHGREEAEKA--ATAAMECFDMSIHSQHMPTISISKDEVSR--GMGLLTLIVKAGFA 362
              +    E E+A      +           +  + + ++  S      L+ ++ K  F 
Sbjct: 296 MDQLSSPSENEEAIEEWKKIHNPKSRAIPDDIREVKLGEEFFSETPEPLLVWVLSKLSFV 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHIIC 414
            S +E RR +K+  + +    I++EK  I+           +  GKK   +  
Sbjct: 356 PSVSEGRRLIKAGGLYLFEDKITDEKFAIQ-----KDKEYLIRQGKKGKFLKI 403


>gi|145298222|ref|YP_001141063.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850994|gb|ABO89315.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 399

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 172/420 (40%), Gaps = 26/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSQLEVALAEI--KRGAEEILVEEELVAKLKEGRPLRIKLGMDPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+++GDPS ++ +R  +  + I+ N           +      
Sbjct: 59  KTFQDLGHEIILLIGDFTAMVGDPSGKNSTRPPLSEEAIKHNALTYAEQAFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +    +++ + +  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 116 -KTRIEYNSSWLGELGATGMIK-LAAKQTVARMMERDDFKKRYTGGQSIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVALK----ADVELGGTDQKFNLLMGRELQKDAGMAAQCVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEIN 296
           + +  I ++    +P   +    +I D  + ++ + L++ P++EI+              
Sbjct: 230 SAANYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSSRPLAEIEEFKAGIAANTLNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    AE A     + F  +     MP + ++ +    G+ +  L+
Sbjct: 287 DVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDEMPEVELALE--GDGLAIANLL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A    +T+EA R +K  A+K +   + + K          TG      GK+      +
Sbjct: 345 KDADLVATTSEALRMIKQGAVKRDGEKLEDGKA------LVGTGTAVYQVGKRKFARVTV 398


>gi|171920584|ref|ZP_02931845.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178779|ref|ZP_02964579.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024298|ref|ZP_02996986.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518560|ref|ZP_03004019.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524115|ref|ZP_03004191.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867737|ref|ZP_03079738.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273478|ref|ZP_03206014.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554094|ref|YP_002284539.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550430|ref|ZP_03771379.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551163|ref|ZP_03772109.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|254765186|sp|B5ZAU9|SYY_UREU1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|171903290|gb|EDT49579.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209395|gb|EDU06438.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018972|gb|EDU57012.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997951|gb|EDU67048.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195660015|gb|EDX53395.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660592|gb|EDX53848.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249998|gb|EDY74778.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541595|gb|ACI59824.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225378978|gb|EEH01343.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379584|gb|EEH01946.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 415

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 122/420 (29%), Positives = 219/420 (52%), Gaps = 20/420 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + +  L  R  I+ I+N  +L    ++     Y+G+D +A SLH G+   +MLL   +
Sbjct: 1   MHNLIKDLKARNLINNITNEEKLKKALAENK-GIYVGFDPSADSLHLGNYIMIMLLKRFR 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
               K  +L+GG T +IGDPS +   R ++    ++ NI KIK     F       T++ 
Sbjct: 60  LHNIKTFALVGGATGMIGDPSGKSAERNLLDKTILEHNITKIKYQLEKF-------TNSQ 112

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  +  ++ ++D LR++G   ++N +L  E + SRL  +  +S+ EF+Y +LQ YDF
Sbjct: 113 VINNYDFYKNMTFLDFLRDVGKLININYLLEKEIISSRL--DVGISYTEFSYNLLQGYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLS 242
           ++L KN +  +Q GGSDQWGNI  GI++  +          LT  LLT + G K GK+  
Sbjct: 171 LQLYKNDNIAIQAGGSDQWGNITTGIEIIRKSLGDDNIACGLTINLLTNSEGKKFGKSEK 230

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
           GAI+L++  +S Y  +Q+  N  DADV      LT + + EI+++ +   +      A+K
Sbjct: 231 GAIYLDENKSSVYEMYQFLINQTDADVEKLLNFLTLIDVDEINKIMQAHKENPALRIAQK 290

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLT 354
            +A  +   VHG+++ E+A   +   F+ +I+  +    +I+   +         + ++ 
Sbjct: 291 ALAQAVVVDVHGQQKYEQALHISQVLFNGNINELNQEEFNIAIKSLPTTKLDKDEIKIID 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  A  ++S   AR  L + +I +N+  +++E   +K QD  +     +  GK+N+ + 
Sbjct: 351 LLNLANISSSNRVARDFLSTGSILVNDIKVNDENFLVKKQDAINQEFSIIKKGKRNYFLI 410


>gi|188578877|ref|YP_001915806.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523329|gb|ACD61274.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 403

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 98/423 (23%), Positives = 167/423 (39%), Gaps = 28/423 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M          L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  
Sbjct: 1   MTTLDESL--ALIGRGA-EEILKLDQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     
Sbjct: 58  MRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILD---- 113

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +    +  N  W   +  +D+++      +V RML  +    R   +Q ++  EF Y ++
Sbjct: 114 RERTEVRFNSEWFGQMSAVDMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLV 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD V L       +++GG+DQ  N++ G  L E         LT PLL       KM 
Sbjct: 173 QGYDSVALR----ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMS 228

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT-TLPMSEI---DRMAKLQGKE 294
           K+L   I +N+      +       I D     +   L+  + ++E              
Sbjct: 229 KSLGNYIGINEP---AIDIVTKTMKIGDELTWRWIDLLSLDISVAEAVRLKEQVTSGELH 285

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             E K  +A E+ T  H    AE+A             +  +P   +     + G+ + +
Sbjct: 286 PREVKLRLARELATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRIAS 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  AG   S +EA R LK  A+KI+  ++ +         F       +  GK+N    
Sbjct: 344 LLTAAGLTPSNSEATRKLKERAVKIDGEVLEDATRV-----FTQGFEGVIQVGKRNFARV 398

Query: 415 HLC 417
            L 
Sbjct: 399 SLV 401


>gi|24214937|ref|NP_712418.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45657564|ref|YP_001650.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|81468629|sp|Q8F411|SYY_LEPIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81568195|sp|Q72RP6|SYY_LEPIC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24195970|gb|AAN49436.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45600803|gb|AAS70287.1| tyrosyl tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 405

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 99/413 (23%), Positives = 178/413 (43%), Gaps = 26/413 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            +  RG +  IS       L  +  +    G+D TA  LH GH  QL  L   Q  GH+ 
Sbjct: 8   EIIRRGTVDLISEEELKSKLQKKKTLKIKAGFDPTAPDLHLGHFVQLKKLKHFQDLGHEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ + E+R+ +  +E+ EN +  +      +          ++ N  
Sbjct: 68  SFLLGDFTAMIGDPTGKSETRKRLSREEVLENSKTYQNQVFKVLDPV----KTKIVYNSN 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   + + + +  + S ++V RML  +    R K  Q +S +EF Y ++Q YD V +   
Sbjct: 124 WCSKMNF-EDVLVLSSKYNVARMLERDDFSKRYKAGQPISMIEFLYPLVQGYDSVAM--- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +C +++GG+DQ  N++ G DL           LT PLL       KM K+L   + + +
Sbjct: 180 -ECDVELGGTDQKFNLLVGRDLQREYGKEAQCVLTLPLLVGLDGSKKMSKSLGNYVGITE 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIATEI 306
              +P + +    +I D  + ++ + LT LP+ EI+        +     E K  +A  I
Sbjct: 239 ---TPIDMFGKLMSISDDLMWNYFELLTDLPLPEIENRKNGMAKKELHPKEIKTELAKLI 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIH--SQHMPTISISKDEVSR--GMGLLTLIVKAGFA 362
                   E E+A     +  +         +  I + ++  +      L+ ++ K  F 
Sbjct: 296 MDQFSSPSENEEAIQEWKKIHNPKSRAVPDDVKEIKLGEEFFAETPEPLLVWVLSKLSFI 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHIIC 414
            S +E RR +K+  + ++   I++EK  I+           +  GKK   +  
Sbjct: 356 PSVSEGRRLIKAGGLYLSEDKITDEKFPIQ-----KGKEYLVRQGKKGKFLKI 403


>gi|160901549|ref|YP_001567130.1| tyrosyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160359193|gb|ABX30807.1| tyrosyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 397

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 27/413 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L I+ E   +  I+    L+ L  +G +   +G D + + LH GH   L  L   Q+ 
Sbjct: 5   DQLRIIQE-DSVDFITPEDFLNKLREKGQLKVKLGVDPSRADLHLGHAVVLRKLKQFQEL 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH    ++G  T+ IGDPS R ++R ++   E++EN +         +         ++ 
Sbjct: 64  GHIVYLIIGDFTARIGDPSGRSKTRPLLSEDEVRENSKTYVEQAFRILHPD----KTVVK 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + D++  + S ++V RML  +    RLK  Q +S  EF Y + QAYD + 
Sbjct: 120 FNSEWLSKLSFADII-NLSSRYTVARMLERDDFSKRLKENQPISISEFLYPLAQAYDSIV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           +    +  +++GG+DQ  N++ G  L E         LT PL+    G  KM K+    I
Sbjct: 179 I----EADVELGGTDQLFNLLVGRKLQEEFGQSPQVVLTMPLIEGTDGYLKMSKSYDNYI 234

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKKII 302
             N    SP + +    +I D  ++ + K LT  P     +I+   K +     + K ++
Sbjct: 235 AFN---DSPQDIFGKVMSIPDHLIIKYMKYLTDTPKDKIKDIENQMKSEEVNPRDIKMVL 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI  +++ +EEAEKA    +  F      + +P I I       G  +L ++ K    
Sbjct: 292 AEEIVNLLYNKEEAEKAKQNFVSIFQKREMPEDLPEIQI-----KSGETILDIVSKTNVY 346

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S +E +R +   AI+IN+  I + K  +   D        L  GKK+     
Sbjct: 347 DSNSEIKRAIMQGAIRINDEKIKDFKDVVDCDD-----GAILRVGKKSFFKIK 394


>gi|152993327|ref|YP_001359048.1| tyrosyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425188|dbj|BAF72691.1| tyrosyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 399

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 189/418 (45%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +S RG   ++ +   ++ L S+        T   G+D T + LH GH   L  L   
Sbjct: 6   LEEIS-RGT-AEVIDMERIEKLVSKYYEDGTTYTVKAGFDPTGADLHLGHTVLLQKLRAF 63

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK G +   L+G  T++IGDP+ + E+R+++    I EN +  +    + +     K+  
Sbjct: 64  QKHGGRVQLLIGDFTAMIGDPTGKSETRKVLDRTTILENAQTYQDQVFNILD----KSKT 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N +WL        +  + + F+V RML  +    R K  +S+S  EF Y +LQ YD
Sbjct: 120 DVVFNSSWL-EALGAAGMVSLTTTFNVARMLERDDFEKRYKSGKSISISEFIYPLLQGYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            VEL       +++GG+DQ  N++ G  L    +   +   L  P+L       KM K+L
Sbjct: 179 SVELQ----SDIEIGGTDQKFNLLMGRFLQRAYEIDKEQAVLMMPILEGLDGVQKMSKSL 234

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEA 298
           +  I + +    P + +    ++ D  +  + + L+   + EI +M +   K       A
Sbjct: 235 NNYIGITEA---PKDIYAKTLSVSDELMWRYYELLSERSLEEITQMKQDVEKGALHPKIA 291

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A E+ T  +  E A+ A       F  +     M  +     EV  G+ +   +V 
Sbjct: 292 KENLALELVTRFYNEELAKLAKEEFDNVFKANQLPSDMKEV-----EVEEGIWICKALVD 346

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AG   ST++ARR +K  A++I+   IS+EK+ ++       G   L  GK+      +
Sbjct: 347 AGIEPSTSQARRDIKQGAVRIDQEKISDEKMNLET------GEYILQVGKRKFAKVKV 398


>gi|187780180|ref|ZP_02996653.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC
           15579]
 gi|187773805|gb|EDU37607.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC
           15579]
          Length = 400

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 180/406 (44%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKNKLEKSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L     
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVTLK---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N+  
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ ++      +     + K  +A EI  
Sbjct: 244 -DANDIYGKVMSIPDEMIVKYYELATDIHPDEVAKIKTKLEKENVNPRDVKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + T+  + DE      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASIKAEENFKNIFQQGNMPEDIDTLEANLDE----TNIVDLIVKAEFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+K+N   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKVNGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|153939021|ref|YP_001390553.1| tyrosyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934917|gb|ABS40415.1| tyrosine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318634|gb|ADF99011.1| tyrosine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 400

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 107/406 (26%), Positives = 181/406 (44%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L     
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLK---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N+  
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ +M    + +     + K  +A EI  
Sbjct: 244 -DANDIYGKVMSIPDGMIVKYYELATDIHPDEVAKMKARLEEENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++  +      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASVKAEANFKNIFQQGNIPEDIDTIKVNLTK----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|217076526|ref|YP_002334242.1| tyrosyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036379|gb|ACJ74901.1| tyrosyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 398

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 93/410 (22%), Positives = 171/410 (41%), Gaps = 26/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL +   +  +S    ++ L     +   +G D +   LH GH   L  L   Q+ GH
Sbjct: 7   LEILKK-NVVDFVSEEELVERLKENRPLRVKLGVDPSRPDLHLGHAVVLKKLKQFQELGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I ++G  T+ IGDP+ R+ +R M+  +E+++N E         +     K    +  N
Sbjct: 66  HIILIIGDFTARIGDPTGRNSTRPMLSEEEVRKNAETYANQAFKILD----KEKTEIRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +K+ + + ++   ++V RML  +    RL +   +S  EF Y + QAYD V + 
Sbjct: 122 NEWLGKMKF-EDVVKLAGKYTVARMLERDDFAKRLSQGYPISIAEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G  + E         +T P++  T    KM K+    I  
Sbjct: 181 ----ADVELGGTDQLFNLLVGRKIQEEYGQKPQIVMTMPIIEGTDGKLKMSKSYDNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIAT 304
                 P + +    +I D  +  + + +T +  SEI+      K       + K  +A 
Sbjct: 237 T---DEPNDMYGKIMSIPDELIAKYMRLITDIEESEIEEYEILMKEGKINPRDVKMRLAR 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    + +E+A  A    ++ F        MP I +   E      ++ L+ K     S
Sbjct: 294 EIVAFFYDKEKARMAEENFVKVFRQKEIPDEMPEIQVEPGE----YNIVDLVTKVNSNYS 349

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +E +R +    +  +   +++ K  +K++         L  GK+     
Sbjct: 350 KSEVKRLISQGGVYFDGKRVNDFKQIVKVE-----KEHVLRLGKRKFFKL 394


>gi|160901336|ref|YP_001566918.1| tyrosyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366920|gb|ABX38533.1| tyrosyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 410

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 171/409 (41%), Gaps = 30/409 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  GH+ 
Sbjct: 24  RGVDELLPQADWVQKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  + +++I+ N E      +  +          +  N  
Sbjct: 84  IFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAETYYTQAAKVLDPA----RTEVRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++  + + ++V RM+       R     S+S  EF Y +LQ YD V L   
Sbjct: 140 WCDKLGARGMIE-LSAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALR-- 196

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               L+MGG+DQ  N++ G  L +         LT PLL       KM K+ +  I + +
Sbjct: 197 --ADLEMGGTDQKFNLLMGRHLQQEYGQDTQCVLTMPLLVGLDGEHKMSKSKNNYIGITE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           +  + +       +I D  + ++   L+   ++EI  +        N  +AK ++A EIT
Sbjct: 255 DANTMFAKV---LSISDTLMWNWYTLLSFKSLAEIAALKAEVEGGRNPKDAKVLLAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A                +  +S+S       +G+  L+ +A  A ST+E
Sbjct: 312 ARFHSAALADAAEQDFNN-RSKGGIPDQIDEVSLS----GAPLGIGALLKQANLAPSTSE 366

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A R +    ++++ + IS+  L+++       G   +  GK+      L
Sbjct: 367 ANRLIDGGGVRVDGTAISDRGLKLEA------GTYVVQVGKRKFARVTL 409


>gi|312622823|ref|YP_004024436.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203290|gb|ADQ46617.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 396

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 102/408 (25%), Positives = 188/408 (46%), Gaps = 28/408 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ++G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I +
Sbjct: 11  KKGAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILI 70

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +          +  N  WL 
Sbjct: 71  IGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQILKILDPQ----KTTIRYNSEWLE 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q YD V +    + 
Sbjct: 127 PMNFLDVI-NLASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EA 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            +++G ++Q  NI+ G  L +       ++  L   L+ T    KM K+L   I +N+  
Sbjct: 182 DVELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINEP- 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++S+ +  T L   EI+ + +   +      +AK  +A EI  
Sbjct: 241 --PNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A KA    ++ F       ++P + +   +V     L   +V+    +ST+E 
Sbjct: 299 LYHGEEAALKAEEEFIKVFQKKDIPDNIPEVELESSKVY----LPRFMVENKLCSSTSEG 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R +KS A+K+N   +++  ++++  D        L  GK   +   L
Sbjct: 355 MRLIKSGAVKLNGEKVNDLDIELQNGD-------VLQVGKLKFVKIKL 395


>gi|332975025|gb|EGK11935.1| tyrosine--tRNA ligase [Desmospora sp. 8437]
          Length = 418

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 104/413 (25%), Positives = 177/413 (42%), Gaps = 28/413 (6%)

Query: 13  SERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             RG   QI    EL+            +   +G D +A  +H GH   L  L   Q+ G
Sbjct: 22  IRRGT-AQIIPEDELEKKVKRSIRTGKPLKVKLGLDPSAPDIHIGHTVILNKLRQFQELG 80

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H    ++G  T  IGDPS + E+R+ +   E++ N +         +          +  
Sbjct: 81  HIVQLVIGDFTGRIGDPSGKSETRKQLSEAEVKANAQTYAEQLFKVLDRD----KTEVRF 136

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ +   + E+ +  +V RML  +    R    Q++S  EF Y ++Q YD V L
Sbjct: 137 NSEWLASLDF-AAVVELAAKTTVARMLERDDFAKRYHSGQAISVHEFFYPLMQGYDSVAL 195

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  ++ GG+DQ  N++ G  L  +    +   LT PLL       KM K+L   I 
Sbjct: 196 Q----SDIETGGTDQTFNLLMGRQLQSQYGQEEQVILTMPLLEGLDGVKKMSKSLGNYIG 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIA 303
           +++     Y       ++ D  ++ + + +T L + E+DR+    K       +AK ++A
Sbjct: 252 IDEPAQEMY---GKAMSVPDELMLKYFELVTDLTLEELDRLRAGLKEGSIHPRDAKMMLA 308

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFA 362
             +  M HG+E A +A       F      + +P   I   E+  G + ++ L+   G  
Sbjct: 309 GRLVQMYHGQEAAAEAEAHFRRVFQQRELPEEIPEKEIPDSELEEGKLWIVQLLSSLGLV 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +S  EARR +K  A+KI+   IS++  +I + D      + +  GK+      
Sbjct: 369 SSNGEARRMVKQGAVKIDGDKISDQDARITVND-----GMVIQVGKRKFARVK 416


>gi|297170337|gb|ADI21372.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_20H22]
          Length = 407

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 104/401 (25%), Positives = 181/401 (45%), Gaps = 25/401 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLML 59
           M    S+ L IL  RG + +I     L+   ++   +    G+D TA  LH GH   +  
Sbjct: 1   MSLSTSEKLEILK-RG-VEEIIPENGLEKKLTKNKTLIIKAGFDPTAPDLHLGHTVLINK 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GHK + L+G  T +IGDPS   E+R ++  +++++N +  +      +     
Sbjct: 59  LKQFQDLGHKVVFLIGDFTGMIGDPSGVSETRPILTVEQLKKNSKTYQEQIFKILD---- 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N +W         L  + S  +V RML  +    R K  + +S  EF Y ++
Sbjct: 115 KKKTKIEFNSSWF-KRMTSAELINLSSKMTVARMLERDDFSKRYKGNKPISIHEFIYPLV 173

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMG 238
           Q YD  EL       +++GG+DQ  N++ G D+ +     +   +T P+L  T    KM 
Sbjct: 174 QGYDSFELK----ADVELGGTDQKFNLLVGRDIQKSFGMEEQIIMTLPILEGTDGVKKMS 229

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I L +    P + +    +I D  +  +   L+     EI  + K   + +N  
Sbjct: 230 KSLKNYIGLQEN---PNDMFGKIMSISDELMWRYFDLLSFKTSEEIKEIKKKTERGLNPM 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           EAKK++++EI T  HG E+A  A       F        +  I +S    +  + ++ L+
Sbjct: 287 EAKKMLSSEIVTRFHGEEKAMLAEKEFTNRFSKGKDPAEIKLIKLSMK--ASSISIIDLL 344

Query: 357 V--KAG---FATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              + G      S +EA+R L   A+KI+ + +++E   ++
Sbjct: 345 SSEELGDKRLCKSKSEAKRMLSQGAVKIDGNKVTDETFLVQ 385


>gi|260890533|ref|ZP_05901796.1| hypothetical protein GCWU000323_01711 [Leptotrichia hofstadii
           F0254]
 gi|260859775|gb|EEX74275.1| tyrosine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 412

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 103/434 (23%), Positives = 184/434 (42%), Gaps = 41/434 (9%)

Query: 1   MPAFKSDFLSI---------LSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTA 46
           M   +++ + +         +  RG  ++I N  E      +       +   +G D T 
Sbjct: 1   MSIDRNNEIEVKNEVERQFNILSRGC-NEIINENEFKKKLEKSISTNTPLRVKLGIDPTG 59

Query: 47  SSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI 106
           S LH GH   L  L   Q  GH+ + L+G  T  IGDP+ + E+R+M+  +++ ENI+  
Sbjct: 60  SELHLGHAVPLRRLKQFQDLGHEVLFLIGTFTGRIGDPTGKSETRKMLSEEQVSENIKTY 119

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                  +          ++ N  WL  +        + S F+V++M+S E    RL   
Sbjct: 120 LDQVKLILDLD----KIKVVYNADWLEKLSL-SDALNLLSQFTVSQMISREDFSKRLAEN 174

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           + +S +EF Y ILQ YD VEL       +++G ++Q  N++ G DL +     +   +  
Sbjct: 175 KPVSLIEFMYPILQGYDSVELK----ADVELGATEQKFNLLRGRDLQKNFGQEQQVCMIM 230

Query: 227 PLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS--- 282
           P+L       KM K+L   I +     +P + +    +I D  + ++   +T +P     
Sbjct: 231 PILVGLDGVEKMSKSLGNYIGVK---DAPNDMFGKVMSISDELMENYYTMITDVPFEKIA 287

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
           EI            EAKK +  E+  + +G E A++A       F        +P + + 
Sbjct: 288 EIKAQIADGSLHPMEAKKQLGAEVVKIYYGEEAAKEARDWFENVFSKRNLDVDLPEVEVP 347

Query: 343 KDEVSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             E    + ++ L+V +A     T+EARR +     KIN+  I + K  + ++       
Sbjct: 348 YGE----INVIDLLVKEAKLLGGTSEARRLISQGGFKINDEAIKDIKANVNVE-----SG 398

Query: 402 IKLSFGKKNHIICH 415
           + +  GKK  +   
Sbjct: 399 MVIRAGKKKIVKVK 412


>gi|326318746|ref|YP_004236418.1| tyrosyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375582|gb|ADX47851.1| tyrosyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 411

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 170/411 (41%), Gaps = 30/411 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EVSLRGTDELLPREEWTRKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDPS R+ +R  +  ++I+ N E      +  +          + 
Sbjct: 80  GHQVIFLIGDFTTLIGDPSGRNTTRPPLTPEQIKINAETYYTQAAKVLDPA----RTEIR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + ++ + ++V RM+       R     S+S  EF Y +LQ YD V 
Sbjct: 136 YNSEW-SEPLGAAGMIQLAAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +         LT PLL       KM K+ +  I
Sbjct: 195 LK----SDLELGGTDQKFNLLMGRHLQQEYGQEPQCILTMPLLVGLDGVDKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + ++  + +       +I D  +  +   L+   ++EI   R     G+   +AK ++A
Sbjct: 251 GITEDANTMFAKV---LSISDDLMWDWYTLLSFKSLAEIAALRQEVEGGRNPKDAKVMLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EITT  H    A+ A                +P +S+        +G+  L+ +A  A 
Sbjct: 308 REITTRFHSAAAADAAEAD-FANRSKGGVPDEIPEVSLG----GAPLGIGALLKQANLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ST+EA R +    ++++ +++S+  L++        G   L  GK+     
Sbjct: 363 STSEANRLIDGGGVRVDGAVVSDRGLKL------DAGTYVLQVGKRKFARV 407


>gi|260910551|ref|ZP_05917218.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635322|gb|EEX53345.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 364

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 135/355 (38%), Positives = 194/355 (54%), Gaps = 9/355 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MKKNFVEELRWRGMLAQIMPGTE--ELLQKETVTAYLGTDPTADSLHIGHLAGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q  GHKPI L+GG T +IGDPS +   R ++ +Q +  N E IK   + F+ +   G   
Sbjct: 59  QMCGHKPIILVGGATGMIGDPSGKSMERNLLDAQTLYHNQECIKAQVAKFLDFEAKGDNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQ 180
           A M+NN  W+    ++D  R +G   +VN M++ +SV+ RL       LSF EF Y +LQ
Sbjct: 119 AEMVNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKKRLNGDARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
            YDF+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A GTK G
Sbjct: 179 GYDFLHLYETKGCKLQLGGNDQWGNMTTGAELIRRTLGVETEAYALTCPLITKADGTKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           KT SG IWL+ + TSPY F+Q+W N+ DAD   + K  T+L    ID     + +     
Sbjct: 239 KTESGNIWLDAKRTSPYMFYQFWLNVSDADAERYIKIFTSLDKETIDALVAEQNEDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
             +K +A E+T MVH +   ++A  A+   F  +     +     +  +V  G+ 
Sbjct: 299 PLQKRLAEEVTVMVHSQAALDQAMEASNILFGKATKESLLKLDEQTLLDVFEGVP 353


>gi|168178623|ref|ZP_02613287.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670690|gb|EDT82664.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 400

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 181/406 (44%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPMTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +   E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQDEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L    +
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSL----N 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N++ 
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
              Y       +I D  +V + +  T +   E+ ++    + +     + K  +A EI  
Sbjct: 246 NDIYEKV---MSIPDGMMVKYYELATDIHPDEVAKIKARLEEENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + H +E + KA       F      + + TI ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHEKEASIKAEANFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KI+   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKIDGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|84622137|ref|YP_449509.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|108935931|sp|Q5H5K1|SYY_XANOR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115305832|sp|Q2P892|SYY_XANOM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84366077|dbj|BAE67235.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 403

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 98/423 (23%), Positives = 166/423 (39%), Gaps = 28/423 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M          L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  
Sbjct: 1   MTTLDESL--ALIGRGA-EEILKLDQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     
Sbjct: 58  MRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILD---- 113

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +    +  N  W   +   D+++      +V RML  +    R   +Q ++  EF Y ++
Sbjct: 114 RERTEVRFNSEWFGQMSAADMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLV 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD V L       +++GG+DQ  N++ G  L E         LT PLL       KM 
Sbjct: 173 QGYDSVALR----ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLEGVAKMS 228

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT-TLPMSEI---DRMAKLQGKE 294
           K+L   I +N+      +       I D     +   L+  + ++E              
Sbjct: 229 KSLGNYIGINEP---AIDIVTKTMKIGDELTWRWIDLLSLDISVAEAVRLKEQVTSGELH 285

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             E K  +A E+ T  H    AE+A             +  +P   +     + G+ + +
Sbjct: 286 PREVKLRLARELATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRIAS 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  AG   S +EA R LK  A+KI+  ++ +         F       +  GK+N    
Sbjct: 344 LLTAAGLTPSNSEATRKLKERAVKIDGEVLEDATRV-----FTQGFEGVIQVGKRNFARV 398

Query: 415 HLC 417
            L 
Sbjct: 399 SLV 401


>gi|149182242|ref|ZP_01860722.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850011|gb|EDL64181.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 415

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 101/431 (23%), Positives = 178/431 (41%), Gaps = 36/431 (8%)

Query: 1   MPAFKSDFLSILSER------GFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSL 49
           M     D      ER      G   +I     L    ++       +   +G D +A  +
Sbjct: 5   MKDLNDDQFKE-VERQFEIYAGGAQEIIPEAGLKQKIAKSIKTNTPLKIKLGLDPSAPDV 63

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H GH   L  +   Q+ GH    ++G  T  IGDP+ +  +R+ +  +E++ N +     
Sbjct: 64  HIGHTVVLNKMRQFQQNGHIVQLIIGDFTGKIGDPTGKSAARKQLTDEEVKHNAQTYFEQ 123

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
           F   +     K    +  N  WL ++   D++   GS  +V R+L       RL   + +
Sbjct: 124 FGKVLD----KEKVELFYNSKWLKNLNLEDVIHLAGS-ITVARLLERNDFSERLAAGKPI 178

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L E     K   +  PLL
Sbjct: 179 SLHEFFYPLMQGYDSVVL----ESDIELGGTDQHFNVLMGRGLQEHYGKEKQVVMMLPLL 234

Query: 230 TT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--- 285
                  KM K+    I +++    P   +    +I D  ++ + +  T L + E +   
Sbjct: 235 EGLDGKEKMSKSKHNYIGIDEA---PSEMFGKTMSIPDELMMKYFELATDLSLEEKNSIG 291

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
              +       +AK ++   +  M H  E AEKA T     F      + +P +  +K  
Sbjct: 292 ENLENGTLHPRDAKMLLGRTLVRMYHSEEAAEKAQTQFKAVFQKGAVPEDIPVVHWNKSR 351

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
               + ++ L+V+     S +EARR + +  +KIN S + +  L++ L D      + L+
Sbjct: 352 ---EISVVELLVELKMMKSKSEARRMIGNGGVKINGSKVEDPALEVSLAD-----GLILN 403

Query: 406 FGKKNHIICHL 416
            GK+      L
Sbjct: 404 VGKRKFTKIKL 414


>gi|50310061|ref|XP_455044.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644179|emb|CAH00131.1| KLLA0E24267p [Kluyveromyces lactis]
          Length = 453

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 137/441 (31%), Positives = 213/441 (48%), Gaps = 33/441 (7%)

Query: 5   KSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           K D L +L ERG + Q+S P +L  + L +   +  Y G D TA SLH G+L  LM+L  
Sbjct: 14  KCDVLQVLRERGLVQQVSQPEKLLSEKLSNGDKIKLYCGADPTAKSLHLGNLLPLMVLLN 73

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------- 113
               GH  +SL+GG T  +GDPS R   R ++   + Q NIE+I   + +F         
Sbjct: 74  FYVRGHDVVSLIGGATGKVGDPSGRKTERDVIAEAKRQGNIERIVEQYKTFFTNGLKYYE 133

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
             IK          LNN +W   +K +D L   G    +  MLS +SV SRL+ +  + F
Sbjct: 134 SRIKERDAPGKVTYLNNISWWQDVKMLDFLATYGKHIRIQNMLSRDSVSSRLQSQDGIGF 193

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-----PKLFALTS 226
            EF Y ILQAYDF  L  N    +Q+GG+DQWGNI  GIDL  R+          F LT 
Sbjct: 194 NEFTYQILQAYDFYHLYSNEQVSIQVGGNDQWGNITAGIDLINRISPQHVKTRPAFGLTV 253

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           PLLTT++G K GK+   A++++ E+ + Y+ +Q++ N  DADV    K  T LP+  I+ 
Sbjct: 254 PLLTTSTGEKFGKSAGNAVFIDPEINTSYDMYQFFVNTTDADVAKQLKIFTLLPLELIED 313

Query: 287 MAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK- 343
           +        NE  A+K +A E+  ++HG  + + A   +   F  S   +++    + + 
Sbjct: 314 IMAQHALSPNERYAQKRLAKEVVDLIHGIGKGDDAEFVSRILFGGSG-FENVKAAELIRV 372

Query: 344 -------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI--NNSIISNEKLQIKLQ 394
                  +++     L  ++ +     S  E+RR +K  +I +  N + + ++       
Sbjct: 373 FDENRILNKIPINTPLSDIVCQL-IDCSKTESRRRIKQGSIYLGPNKNKVVDDTTNFSP- 430

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
                  + L  GK+   +  
Sbjct: 431 FLIDERVLLLRVGKQKCYVIE 451


>gi|126660180|ref|ZP_01731298.1| tyrosyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618545|gb|EAZ89296.1| tyrosyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 407

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 23/398 (5%)

Query: 23  NPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L+ L  +    +   +G D T + +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 30  PEENLEKLIEKSDRPLRVKLGIDPTGTDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQ 89

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + S++++ N E         + + T      +  N  WL  +     
Sbjct: 90  IGDPTGKSEVRKQLTSEQVKSNAENYLEQLRPILDFDTP-GRLEIRYNSEWLKELNL-AK 147

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +    D  +++GG+
Sbjct: 148 IQELLATMTVGQMLAKEGFAERYKQENPIFLHEFLYPLMQGYDSVMI----DADVELGGT 203

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  P+L  T    KM K+L+  + L ++  S Y+   
Sbjct: 204 DQKFNIAVGRDLQRHFGKKPQFGLLLPILLGTDGSQKMSKSLNNYVGLKEDELSMYS--- 260

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+ ++            + +K++A EI T  H ++ A  A
Sbjct: 261 KLEKTPDAIIKDYFELLTNLPLDQLPE-------NPRDCQKLLALEIVTQFHSQKAAITA 313

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A +                    V     L  ++  +G   S+ E RR ++  A+++
Sbjct: 314 QKTAEDLVKNKGTGATDAVPEYDLSNVEFPAKLFYILNASGLCGSSGEGRRQIQGGAVRL 373

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +   IS+  +     +  S     L  GKK      L 
Sbjct: 374 DGEKISDVNITFDNLEQLSGK--VLQVGKKKF--IKLV 407


>gi|46199335|ref|YP_005002.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55981368|ref|YP_144665.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|25091347|sp|P83453|SYY_THET2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81363981|sp|Q5SIH0|SYY_THET8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24158659|pdb|1H3F|A Chain A, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Tyrosinol
 gi|24158660|pdb|1H3F|B Chain B, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Tyrosinol
 gi|24987338|pdb|1H3E|A Chain A, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Wild-Type Trnatyr(Gua) And With Atp And
           Tyrosinol
 gi|46196960|gb|AAS81375.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772781|dbj|BAD71222.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) (TyrRS) [Thermus
           thermophilus HB8]
          Length = 432

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 97/433 (22%), Positives = 168/433 (38%), Gaps = 42/433 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     L  L     +T  +G D T   LH GH   L  +   Q+ GHK +
Sbjct: 14  LLKRGAEEIVPEEELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVV 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T +IGDPS R ++R  +  +E +EN +         ++         +  N  W
Sbjct: 74  LIIGDFTGMIGDPSGRSKTRPPLTLEETRENAKTYVAQAGKILRQEPHL--FELRYNSEW 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + + +++R      +V +ML  E  + R +    +S  E  Y   QAYD V +    
Sbjct: 132 LEGLTFKEVVRLTSLM-TVAQMLEREDFKKRYEAGIPISLHELLYPFAQAYDSVAIR--- 187

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              ++MGG+DQ  N++ G ++              PLL       KM K+L   I L + 
Sbjct: 188 -ADVEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGREKMSKSLDNYIGLTEP 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN----------EAKK 300
              P   ++    + D  + S+ + LT L   EI+ + K      +           A  
Sbjct: 247 ---PEAMFKKLMRVPDPLLPSYFRLLTDLEEEEIEALLKAGPVPAHRVLARLLTAAYALP 303

Query: 301 IIATEITTMVHGR---------------EEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
            I   I    +                  E  + A A  +        + +P ++I   E
Sbjct: 304 QIPPRIDRAFYESLGYAWEAFGRDKEAGPEEVRRAEARYDEVAKGGIPEEIPEVTIPASE 363

Query: 346 VSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G + +  L   AG   S  EARR +++  ++++  ++++  LQ+ L          L
Sbjct: 364 LKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDLS-----RPRIL 418

Query: 405 SFGKKNHIICHLC 417
             GK   +   L 
Sbjct: 419 QRGKDRFVRVRLS 431


>gi|291568848|dbj|BAI91120.1| tyrosyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 415

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 98/396 (24%), Positives = 170/396 (42%), Gaps = 24/396 (6%)

Query: 23  NPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L   +  S G +   +G D T S +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 39  PEENLGRRLALSSGPLRIKLGIDPTGSDIHLGHSIIFRKLRAFQDAGHTAVLIIGDFTAR 98

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E RR +  +++++N +         + + T     +  N   WL  +     
Sbjct: 99  IGDPTGKSEVRRQLTPEQVEKNAQTYLDQLRPILDFDTPGRLEIRRN-SEWLSKLDLAKT 157

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +    +V +ML+ E    R ++E  +   EF Y ++Q YD V +       +++GG+
Sbjct: 158 LDLLSRM-TVGQMLAKEGFSLRFEQENPIYLHEFLYPLMQGYDSVAVQ----ADVELGGT 212

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  N+  G DL         F L  P+L  T    KM K+L   + L+++  + Y+   
Sbjct: 213 DQKFNLAVGRDLQRYFGQTPQFGLLMPILIGTDGVQKMSKSLGNYVGLSEDALTMYS--- 269

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
               + D+ +  + + LT  P++E+            + +K++A +I T  HG   A  A
Sbjct: 270 KLEKVPDSLIEQYFELLTDYPLAELPE-------NPRDRQKLLALDIVTQYHGEAAALAA 322

Query: 320 ATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
             AA+          + +P  S+S  EV     L  ++  +G   S +EARR +   A+K
Sbjct: 323 QNAALNLVQGDATRAEAVPEFSLS--EVEFPAKLFYILSASGLCKSGSEARRQIAGGAVK 380

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           I+   I ++ L +   +        L  GKK  I  
Sbjct: 381 IDGDRIEDDNLVVASAEEVKGR--VLQVGKKKFIRL 414


>gi|284050939|ref|ZP_06381149.1| tyrosyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 415

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 99/396 (25%), Positives = 170/396 (42%), Gaps = 24/396 (6%)

Query: 23  NPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L   +  S G +   +G D T S +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 39  PEENLGRRLALSSGPLRIKLGIDPTGSDIHLGHSIIFRKLRAFQDAGHTAVLIIGDFTAR 98

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E RR +  +++++N +         + + T     +  N   WL  +     
Sbjct: 99  IGDPTGKSEVRRQLTPEQVEKNAQTYLDQLRPILDFDTPGRLEIRRN-SEWLSKLDLAKT 157

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +    +V +ML+ E    R ++E  +   EF Y ++Q YD V +       +++GG+
Sbjct: 158 LDLLSRM-TVGQMLAKEGFSLRFEQENPIYLHEFLYPLMQGYDSVAVQ----ADVELGGT 212

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  N+  G DL         F L  P+L  T    KM K+L   + L+++  + Y+   
Sbjct: 213 DQKFNLAVGRDLQRYFGQTPQFGLLMPILIGTDGVQKMSKSLGNYVGLSEDALTMYS--- 269

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
               I D+ +  + + LT  P++E+            + +K++A +I T  HG   A  A
Sbjct: 270 KLEKIPDSLIEQYFELLTDYPLAELPE-------NPRDRQKLLALDIVTQYHGEAAALAA 322

Query: 320 ATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
             AA+          + +P  S+S  EV     L  ++  +G   S +EARR +   A+K
Sbjct: 323 QNAALNLVQGDATRAEAVPEFSLS--EVEFPAKLFYILSASGLCKSGSEARRQIAGGAVK 380

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           I+   I ++ L +   +        L  GKK  I  
Sbjct: 381 IDGDRIEDDNLVVASAEEVKGR--VLQVGKKKFIRL 414


>gi|148654018|ref|YP_001281111.1| tyrosyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148573102|gb|ABQ95161.1| tyrosyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 414

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 176/409 (43%), Gaps = 21/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG     S    +  L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 24  IIKRGTHEIFSEEDLVAKLKLGRPLKIKAGFDPTAPDLHLGHTVLINKLKHFQDLGHEIY 83

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T+ IGDPS ++ +R  +  +++  N +         +     K    ++ N  W
Sbjct: 84  FLIGDYTAKIGDPSGKNTTRPPLTDEQVMANAKTYAEQVFKILD----KEKTNVVFNSQW 139

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L    
Sbjct: 140 FNDMSAGDMI-QLASQLTVSRMLERDDFAKRYASQTPIAIHEFLYPLVQGYDSIAL---- 194

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  ++MGG+DQ  N++ G  L  R        +T P+L       KM K+L   + +   
Sbjct: 195 EADVEMGGTDQTFNLLMGRTLQGRYGHEAQVCITVPILEGLDGVNKMSKSLGNYVGIE-- 252

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITT 308
             +P   +Q   ++ D+ +  + + L+  PMSE+D +        N  E K+I+A E+  
Sbjct: 253 -DAPGTMYQKILSMPDSLIHRYFEFLSFKPMSEVDALMAEMAAGRNPQEIKRILAEELIE 311

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P +++  +     + +  ++ +A  A ++  A
Sbjct: 312 RFHGAEAAANAHKSAGNVLADGELPVDLPEVTLELEAGQEALFITQILNQADLAKNSAAA 371

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  LK NA+K++   + N    +      S  ++ +  GKK      + 
Sbjct: 372 KDMLKRNAVKVDGEEV-NAGFSLT-----SGQSVVIQAGKKAFAKVTIA 414


>gi|300087847|ref|YP_003758369.1| tyrosyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527580|gb|ADJ26048.1| tyrosyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 408

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 89/412 (21%), Positives = 176/412 (42%), Gaps = 27/412 (6%)

Query: 11  ILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
               R  + +I + +EL  L S    +    G+D ++  +H GH+  L  L   Q+ GH+
Sbjct: 7   DFVLRRAVSEIISEKELRSLLSSGKKLRLKEGFDPSSPDIHLGHMVGLRKLRQFQEMGHQ 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T+ IGDP+    +R ++ +++++ N E     F   +          +    
Sbjct: 67  VVLIVGDWTAQIGDPTGASVTRPILTAEQVRANAETYLQQFFKVVDRA----RTEVRWQS 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W       D+++ + S F++ +ML+ +  + R    + ++  EF Y +LQAYD V +  
Sbjct: 123 EWFTGFTLADVIK-LTSRFTIAQMLARDDFKKRFDSNRPITITEFLYPLLQAYDSVMV-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAIWLN 248
             +  ++ GG+DQ  N++ G +L   +  P      +P+LT    G KM K+L   I + 
Sbjct: 180 --EADIEFGGNDQKFNLLVGRELQSMIGQPPQQVFMTPILTGTGGGRKMSKSLHNHIGVA 237

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATE 305
           +    P   +    +I D  ++ + + LT +  +E+D      K       E KK +A E
Sbjct: 238 EP---PEVIFGKVMSIGDDLIMQYFELLTDITDNELDTIAEDLKAGQVNPMEYKKRLARE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV---SRGMGLLTLIVKAGFA 362
           I   ++ +  A+KA                +P I I           + L +++ ++G  
Sbjct: 295 ILLQLYPKSSADKAMAYFESVHQRHEVPDTIPEIRIDYSAFTRDGGDIDLTSILCQSGLT 354

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EA+R +    + I+ + ++ + L +            +  GK+     
Sbjct: 355 ASRGEAKRLIAQGGVSIDGNKVTTDTLSLSSG-------CVVKAGKRKFARL 399


>gi|257063568|ref|YP_003143240.1| tyrosyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791221|gb|ACV21891.1| tyrosyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 405

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 95/404 (23%), Positives = 167/404 (41%), Gaps = 20/404 (4%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    I     L+ L     +   +G D TA  +H GH   L  L   Q  GH+   ++G
Sbjct: 16  GIDAVIPEDALLEKLKRGKPLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHRVTLIIG 75

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
            GT++IGDPS R+ +R  +  +++  N +         +          + +N  W+  +
Sbjct: 76  DGTALIGDPSGRNSTRPQLTKEQVAANAQTYVDQAFKILDP----EKTELKHNADWILDL 131

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
             +  L  + S F+V R+L  +    R      ++  EF Y ++QAYD V +    +  +
Sbjct: 132 D-MAKLLSLLSNFTVARILERDDFHKRYTGGLPIALHEFLYPVMQAYDSVVI----NADV 186

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSP 254
           ++GGSDQ  N++ G +L E+L      ALT PLL  T    KM K+    I L      P
Sbjct: 187 EIGGSDQLFNLLAGRELMEKLGMEPQVALTLPLLEGTDGVRKMSKSYGNYIGLT---DEP 243

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            + +    +I D  ++ + +  +T+    + EI+          N+ K+ +A  I    +
Sbjct: 244 NDMFGKIMSIPDELMIKYYRLASTVEVAQIDEIEAGLANDELHPNKVKRALARNIVEAYY 303

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
               A+ A +     F      +  P +         G +    +IV+A  A S +EARR
Sbjct: 304 DEAAAQAAESDFDLKFKEHGFPEDAPVVEADLTPGEDGTVYFAKIIVEAKAAQSVSEARR 363

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +    +K+N + +  +   +  +         +  GKK     
Sbjct: 364 LIDGGGVKVNGTALPAKSYYVTPETVAHAQ---VQVGKKKFFKL 404


>gi|209526728|ref|ZP_03275251.1| tyrosyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209492860|gb|EDZ93192.1| tyrosyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 415

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 97/396 (24%), Positives = 168/396 (42%), Gaps = 24/396 (6%)

Query: 23  NPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L   +  S   +   +G D T S +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 39  PEENLGQRLALSTRPLRIKLGIDPTGSDIHLGHSIIFRKLRAFQDAGHTAVLIIGDFTAR 98

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E RR +  +++++N +         + + T     +  N   WL  +     
Sbjct: 99  IGDPTGKSEVRRQLTPEQVEQNAQTYLEQLRPILDFDTPGRLEIRRN-SEWLSKLDLAKT 157

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +    +V +ML+ E    R ++E  +   EF Y ++Q YD V +    +  +++GG+
Sbjct: 158 LDLLSRM-TVGQMLAKEGFSLRFEQENPIYLHEFLYPLMQGYDSVAV----EADVELGGT 212

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  N+  G DL         F L  P+L  T    KM K+L   + L+++  + Y+   
Sbjct: 213 DQKFNLAVGRDLQRYFGQTPQFGLLMPILIGTDGVQKMSKSLGNYVGLSEDPLTMYS--- 269

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
               + D  +  + + LT  P++E+            + +K++A +I T  HG   A  A
Sbjct: 270 KLEKVPDGLIAQYFELLTDYPLAELPE-------NPRDRQKLLALDIVTQYHGEAAALAA 322

Query: 320 ATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
             AA+          + +P  S+S  EV     L  ++  +G   S +EARR +   A+K
Sbjct: 323 QKAAVNLVQGDATRAEAVPEFSLS--EVEFPAKLFYILSASGLCKSGSEARRQIAGGAVK 380

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           I+   I +  L +   +        L  GKK  I  
Sbjct: 381 IDGDRIEDPNLVVASAEELKGR--VLQVGKKKFIRL 414


>gi|311693249|gb|ADP96122.1| LOW QUALITY PROTEIN: tyrosyl-tRNA synthetase [marine bacterium
           HP15]
          Length = 403

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 94/408 (23%), Positives = 175/408 (42%), Gaps = 22/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG    I     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ +
Sbjct: 13  IIKRGVDELIPEDELIEKLKEGRPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEVM 72

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +  Q++ EN    K      +          ++ N  W
Sbjct: 73  FLIGDFTGMIGDPTGKSATRPPLTEQQVAENAVSYKEQVFKILDPA----KTRVMFNSDW 128

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D+++ +   ++V RML  +    R + EQ+++  EF Y ++Q YD V +    
Sbjct: 129 MGKMSAADMIK-LAGQYTVARMLERDDFTKRYRAEQAIAIHEFLYPLVQGYDSVAM---- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G  L +         LT P+L       KM K+L   + +N  
Sbjct: 184 EADVELGGTDQKFNLLMGRILQKHYGQSPQVILTMPILEGLDGVQKMSKSLGNYVGVN-- 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITT 308
             SP   +    ++ D  +  + + L+  P++E+D   K      N    KK++A EI T
Sbjct: 242 -DSPGEMYTKLLSMPDDLLWRYFELLSFRPLAEVDEFRKAVAGGANPPGLKKLLAEEIIT 300

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H  E A  A  +A     +     ++PT+ +   E    + +  ++  AG   +   A
Sbjct: 301 RFHDEEAARTAHKSAGNRVALGEIPDNVPTVEVPL-EGQSEIPMAAVLRLAGLVKNGAAA 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+ ++      +++ ++  D        +  GKK      +
Sbjct: 360 RDVLGRGAVFVDGQKFEGDRMFVEGDD------CVIQAGKKKIARVLI 401


>gi|256826687|ref|YP_003150646.1| tyrosyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256582830|gb|ACU93964.1| tyrosyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 403

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 105/411 (25%), Positives = 179/411 (43%), Gaps = 21/411 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L I+   G    +     L+ L     +   +G D TA  +H GH   L  L   Q  GH
Sbjct: 8   LRIIKS-GTAQIVPEEALLEKLKRDRPLNIKLGVDPTAPDIHIGHAVPLRKLRTFQDLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   ++G GT++IGDPS R+ +R  + S E+  N +         +          + +N
Sbjct: 67  QVTLIIGDGTALIGDPSGRNSTRPQLTSDEVAANAQTYIDQAFKILDPQ----KTTLRHN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W      ++ L +I S F+V R+L  +   +R  +   +S  EF Y I+QAYD V + 
Sbjct: 123 AEW-LLDLNLEGLLKIASNFTVARILERDDFHNRYTQNLPISVHEFLYPIMQAYDSVVI- 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
              D  +++GG+DQ  N++ G +L E++       LT PLL  T    KM K+    I L
Sbjct: 181 ---DADVELGGTDQLFNLLAGRELMEKMGKEPQVCLTLPLLEGTDGVRKMSKSYGNYIGL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIAT 304
                +  + +    +I D  +V + +  +T  + EIDR+ +         N+ K+ +A 
Sbjct: 238 T---DAADDMFGKVMSIPDELMVKYYRLASTESVDEIDRLEEGLAAGSLHPNQVKRALAR 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG-LLTLIVKAGFAT 363
            I    HG   A +A  +    F      + +P  + S     +GM  L  ++ +A  A 
Sbjct: 295 NIVAAYHGDLAAIEAEVSFDRLFKNHDMPEDIPMFTGSLQPDEQGMVYLPKVLHEASLAK 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  E RR +    +K+N + ++ +  QI   D +      +  GK+  +  
Sbjct: 355 SAGEGRRLIDGGGVKVNGTPLAAKSYQIAAGDLEG---AVIQVGKRRFVKL 402


>gi|120612682|ref|YP_972360.1| tyrosyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120591146|gb|ABM34586.1| tyrosyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 410

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 100/413 (24%), Positives = 171/413 (41%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +        L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EVSLRGVEELLPRDEWTRKLARSEATGIPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDPS R+ +R  +  ++I+ N E      S  +          + 
Sbjct: 80  GHQVIFLIGDFTTLIGDPSGRNSTRPPLTPEQIKVNAETYYRQASMVLDPA----KTEIR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +     + ++ + ++V RM+       R     S+S  EF Y +LQ YD V 
Sbjct: 136 YNSEWCEPLGA-AGMIQLAAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +         LT PLL       KM K+    I
Sbjct: 195 LR----SDLELGGTDQKFNLLMGRHLQQEYGQEPQCILTMPLLVGLDGVDKMSKSKGNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + ++  + +       +I D  +  +   L+   ++EI   R     G+   +AK ++A
Sbjct: 251 GITEDANTMFAKV---LSISDDLMWDWYTLLSFKSLAEIAALRQEVEGGRNPKDAKVMLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EITT  H    A+ A                +P +S+        +G+  L+ +A  A 
Sbjct: 308 REITTRFHSAAAADAAEAD-FANRSKGGVPDEIPEVSLE----GAPLGIGALLKQANLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST+EA R +    +++  S++S+  L+++       G   +  GK+      L
Sbjct: 363 STSEANRLIDGGGVRVEGSVVSDRGLKLEA------GTYVVQVGKRKFARVTL 409


>gi|297624191|ref|YP_003705625.1| tyrosyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165371|gb|ADI15082.1| tyrosyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 394

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 179/409 (43%), Gaps = 27/409 (6%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG  H +     L+            +   +G D ++  LH GH   L  +   Q  GHK
Sbjct: 6   RGAEHLV-PEGGLEEKLALARREGRPLRVKLGVDPSSPDLHLGHAVVLRKMRDFQDAGHK 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T+ IGDPS + ++R ++  ++ + N E      +  +          +  N 
Sbjct: 65  VVLIIGDFTATIGDPSGKSKTRPVLSLEQTRRNSESYVAQATKILDPNPD--KLELRYNS 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + + +L++   S+ +V RML  +    R      +S  EF Y + QAYD V +  
Sbjct: 123 EWLAPLGFAELIKLASSY-TVARMLERDDFTKRYAAGVPISIHEFLYPLAQAYDSVAIR- 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
                +++GG+DQ  N++ G D+          ALT PLL       KM K+L   I + 
Sbjct: 181 ---ADVELGGTDQLFNLLVGRDVQRAYGQAPQVALTMPLLEGLDGVEKMSKSLGNYIGVA 237

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           +    P   ++    + DA +  + +  T+ P+ E   +     ++I EA ++ A E+  
Sbjct: 238 EA---PEVMFKKAMLVPDALLYRYFELCTSFPLGEARALI---EQDIKEAHRVFARELVR 291

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNE 367
           + HG E  ++A     +          +P +++S D    G + +  L   AG +TS  +
Sbjct: 292 LYHGPEPIQEAEAR-YDHVAKGGIPDDVPELTLSADATQDGVIWVCKLATLAGLSTSNGD 350

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR +++  +K++  ++ +  LQ++L        + L  GK   +   L
Sbjct: 351 ARRLIQNRGLKLDGEVVEDVNLQVRL-----DAPVVLQRGKDRFVRVRL 394


>gi|312792884|ref|YP_004025807.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180024|gb|ADQ40194.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 396

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 102/408 (25%), Positives = 188/408 (46%), Gaps = 28/408 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ++G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I +
Sbjct: 11  KKGAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILI 70

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +          +  N  WL 
Sbjct: 71  IGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQILKILDPQ----KTTIRYNSEWLE 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q YD V +    + 
Sbjct: 127 PMNFLDVI-NLASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EA 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            +++G ++Q  NI+ G  L +       ++  L   L+ T    KM K+L   I +N+  
Sbjct: 182 DVELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINEP- 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++S+ +  T L   EI+ + +   +      +AK  +A EI  
Sbjct: 241 --PNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A KA    ++ F       ++P + +   +V     L   +V+    +ST+E 
Sbjct: 299 LYHGEEAALKAEEEFIKVFQKKDIPDNIPEVELQSSKVY----LPRFMVENKLCSSTSEG 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R +KS A+K+N   +++  ++++  D        L  GK   +   L
Sbjct: 355 MRLIKSGAVKLNGEKVNDLDIELQNGD-------VLQVGKLKFVKIKL 395


>gi|312963384|ref|ZP_07777866.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282190|gb|EFQ60789.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 399

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 163/408 (39%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEELLVEAELIEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKTQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQMGPADFIRLTSQYTVARMLERDDFDKRYSTNQPIAIHEFLYPLVQGYDSVALR--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
              P   +    +I DA +  + + L+   M EI+  R     G    + K  +A EI  
Sbjct: 241 ---PGVMYGKLVSIPDALMWRYFELLSFRSMDEINALRADVEAGANPRDVKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA            +P I ++  E      +L    KAG   ++  A
Sbjct: 298 RFHGEEAAASAHRAAGNRMKDGELPDDLPEIELAAAEAMPIAAVLN---KAGLVKNSAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++I+  ++ +     +L             GKK      L
Sbjct: 355 RDLLGSGGVRIDGEVV-DRTFIYEL-----GATHVCQAGKKAFARITL 396


>gi|172035948|ref|YP_001802449.1| tyrosyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171697402|gb|ACB50383.1| tyrosyl tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 407

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 99/398 (24%), Positives = 168/398 (42%), Gaps = 23/398 (5%)

Query: 23  NPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L+ L  Q    +   +G D T + +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 30  PEENLEKLIEQCHRPLRVKLGIDPTGTDIHLGHSIPFRKLRGFQDAGHTAVVIIGDFTAQ 89

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ +  QE++ N E         + + T      +  N  WL  +     
Sbjct: 90  IGDPTGKSEVRKQLTPQEVKNNAENYLEQLRPILDFDTP-GRLEIRYNSEWLKELNL-AK 147

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +    D  +++GG+
Sbjct: 148 IQELLATMTVGQMLAKEGFAERYKQENPIFLHEFLYPLMQGYDSVMI----DADVELGGT 203

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  P+L  T    KM K+L+  + L ++  S Y+   
Sbjct: 204 DQKFNIAVGRDLQRHFGKKPQFGLLLPILLGTDGSQKMSKSLNNYVGLKEDELSMYS--- 260

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+ ++        +   + +K++A EI T  HG+E A  A
Sbjct: 261 KLEKTPDAIIKDYFELLTNLPLDQL-------PQNPRDCQKLLAIEIVTQFHGKEAALSA 313

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A +                    V     L  ++  +G   S+ E RR ++  A+++
Sbjct: 314 QKTAEDLVKNKGTGVTDAVPEYDLSNVEFPAKLFYILNASGLCGSSGEGRRQIQGGAVRL 373

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +   I++    I  +D +      L  GKK      L 
Sbjct: 374 DGEKITDVN--ITFEDLEQLSGKVLQVGKKKF--IKLV 407


>gi|291392439|ref|XP_002712724.1| PREDICTED: tyrosyl-tRNA synthetase 2, mitochondrial-like
           [Oryctolagus cuniculus]
          Length = 478

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 131/432 (30%), Positives = 204/432 (47%), Gaps = 29/432 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +    R    EL  L  +G       T Y G+D T+ SLH GHL  L+ LF  
Sbjct: 43  KARGLFKEFFPERGTKTELPELFDRGSGSFSPQTVYCGFDPTSDSLHVGHLLALLGLFHF 102

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-------IFSSFIKY 116
           Q+ GH  I+L+GG T+ +GDPS R + R  + ++ +  N   ++                
Sbjct: 103 QRAGHNVIALVGGATARLGDPSGRTKEREALGAECVGANARALRAGLEALAANHQQLFGD 162

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV++RLK  + +S  EF Y
Sbjct: 163 GRAWGSFTVLDNSAWYGQQHLVDFLAAVGGHFRMGTLLSRLSVQTRLKSPEGMSLAEFLY 222

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L + Y CR+Q+GGSDQ GNI  G +   +L    +F +  PL+T+ +G K
Sbjct: 223 QVLQAYDFYYLFQRYGCRVQLGGSDQLGNITSGYEFVHKLTGEDVFGIMVPLITSTTGAK 282

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKE 294
           +GK+   A+WL++E TSP+  +Q++    D+ V  + K  T LP+ EID + +L     E
Sbjct: 283 LGKSAGNAVWLSRERTSPFELYQFFLRQQDSAVERYLKLFTFLPLPEIDHLMQLHLKEPE 342

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKD 344
               +K +A E+T +VHGRE  + A       +  SI +  +             S S+ 
Sbjct: 343 KRVPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVLSDQELKELFREASFSEL 402

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIK 403
            +  G  +L    KA          R +    + IN+  ++N +  + + Q     G   
Sbjct: 403 VLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSL 462

Query: 404 LSFGKKNHIICH 415
           L  GK+N  +  
Sbjct: 463 LKIGKRNFYVIK 474


>gi|15615790|ref|NP_244094.1| tyrosyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81785909|sp|Q9K7X9|SYY_BACHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|10175851|dbj|BAB06947.1| tyrosyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 412

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 182/413 (44%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +RG +  I     L     +       +   +G D +A  +H GH   L  L   Q 
Sbjct: 19  EILKRGVVE-IVPEEALREKIEKSVRTGKPLKVKLGMDPSAPDVHIGHTVVLHKLRQFQD 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   L+G  T  IGDPS + E+R+ +  ++++ N       +   +        A +
Sbjct: 78  LGHEVQMLIGDFTGRIGDPSGKSETRKQLTDEQVKANARTYVEQYGKILD----MEKATL 133

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL ++ + D+++      +V RML  +    R K  Q +S  EF Y ++Q YD V
Sbjct: 134 HYNSKWLSALNFEDVIKLASQM-TVARMLERDDFEKRYKSGQPISIHEFFYPLMQGYDSV 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK-MGKTLSGA 244
            L    +  +++GG+DQ  N++ G  L E     K  A+T PL+    G + M K+L+  
Sbjct: 193 AL----ESDIEIGGTDQKFNLLMGRMLQEAYGNDKQVAITMPLIEGLDGERKMSKSLNNY 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKI 301
           I +++    P   +    +I D  +V + +  T L M E+  +AK          +AK  
Sbjct: 249 IGIDEA---PNEIFGKAMSIPDELMVKYYELATDLSMDEVKAIAKGLEDGSVHPRDAKMK 305

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +   +  M HG +EAE+A       F        +P +   K +    + ++ L+V    
Sbjct: 306 LGATLVRMYHGEKEAEEAVNYFKTVFQKRDLPTDIPEV---KWDGESPVWIVDLLVTLDL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             S  EARR +++  +K+N   + + +LQ++++D      + +  GK+     
Sbjct: 363 LPSKGEARRMVQNGGVKLNGEKVEDVQLQVEIED-----GLIVQVGKRKFKKL 410


>gi|195586539|ref|XP_002083031.1| GD24918 [Drosophila simulans]
 gi|194195040|gb|EDX08616.1| GD24918 [Drosophila simulans]
          Length = 463

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 124/438 (28%), Positives = 215/438 (49%), Gaps = 28/438 (6%)

Query: 5   KSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I   +    +  L + G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QKNLL-ELTDRGFFQGIFPDTAAPRMKQLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SR++ E  +S
Sbjct: 144 WDSKKQKFPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRMESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDCNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTI----- 339
              +E    +A+ ++A ++T +VHG    ++A       +      +   ++P I     
Sbjct: 324 EHTREPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAQLNLPEIQQTFQ 383

Query: 340 --SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             ++       GM +L L +KA    +  +A R + +    +N   + N    +      
Sbjct: 384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHI 443

Query: 398 STGNIKLSFGKKNHIICH 415
                  + G+    I  
Sbjct: 444 CATEFSAARGQTQLYIVR 461


>gi|297172919|gb|ADI23880.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_48J03]
          Length = 404

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 107/423 (25%), Positives = 186/423 (43%), Gaps = 25/423 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +     L I  +RG    +           +  +   +G+D TA  LH GH   +  +
Sbjct: 1   MISKDKQLLEI--QRGTEEILVEEEFTKRFHQKKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I EN    +      +      
Sbjct: 59  RQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTREQIDENAATYEKQIFKILDKDL-- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +     L EI S ++V RML  +  ++R K    +S  E  Y ++Q
Sbjct: 117 --TRIEFNSSWMQQVN-SSKLIEIASKYTVARMLERDDFKNRFKTGNPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
           AYD V L    +  +++GG+DQ  N++ G  L +    P   A+T PLL       KM K
Sbjct: 174 AYDSVAL----EADVELGGTDQKFNLLVGRHLQKLYGQPPQTAITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T +  I L     SP +      +I D  +  + + L+   + EI   +    +GK   +
Sbjct: 230 TANNYIALT---DSPRDMLGKIMSISDELMWRYFELLSARSLDEIGLLQKQVKKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT--- 354
            K ++A EI    HG++ ++ A  + +  F      + + ++SI+  EV    G++    
Sbjct: 287 IKFLLAEEIVERFHGKQSSDDAKASFLRQFQQGQMPEEIKSVSINYSEVESEPGIVNMAK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A   TS +E  R +K+ ++++    I   +LQ      D+     LSFGK      
Sbjct: 347 VLYLANLVTSVSEGHRAIKAGSVRLEGEKIERSQLQ-----MDANSRHILSFGKHRFAKV 401

Query: 415 HLC 417
              
Sbjct: 402 EFI 404


>gi|67919996|ref|ZP_00513516.1| Tyrosyl-tRNA synthetase, class Ib [Crocosphaera watsonii WH 8501]
 gi|67857480|gb|EAM52719.1| Tyrosyl-tRNA synthetase, class Ib [Crocosphaera watsonii WH 8501]
          Length = 409

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 95/398 (23%), Positives = 170/398 (42%), Gaps = 23/398 (5%)

Query: 23  NPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L+ L  +    +   +G D T + +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 30  PEENLEKLIEKCHRPLRIKLGIDPTGTDIHLGHSIPFRKLRGFQDAGHTAVVIIGDFTAQ 89

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + S+ +++N E         + + T      +  N  WL  +     
Sbjct: 90  IGDPTGKSEVRKQLTSEAVRKNAESYLEQLRPILDFETP-GRLEIRYNSEWLSELNL-AK 147

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +    D  +++GG+
Sbjct: 148 IQELLATMTVGQMLAKEGFAERYKQENPIFLHEFLYPLMQGYDSVMI----DADVELGGT 203

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  P+L  T    KM K+L+  + L ++  S Y+   
Sbjct: 204 DQKFNIAVGRDLQRHFGKKPQFGLLLPILRGTDGSQKMSKSLNNYVGLKEDELSMYS--- 260

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+ E+            E++K++A EI +  HG++ A  A
Sbjct: 261 KLEKTPDAIIKEYFELLTNLPLEELPE-------NPRESQKLLALEIVSQFHGKQAAVTA 313

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A +                   +V     L  ++  +G   S+ + RR ++  A+++
Sbjct: 314 QKTAEDLVKNKGTGATDAVPEYDLSKVEFPAKLFYILSASGLCGSSGDGRRQIQGGAVRL 373

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +   I++  +  +  +  S     L  GKK      L 
Sbjct: 374 DGEKITDVNITFEQSEQLSGK--VLQVGKKKF--IKLV 407


>gi|226948471|ref|YP_002803562.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843127|gb|ACO85793.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 400

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 107/406 (26%), Positives = 179/406 (44%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L             +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKNKLERSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L    +
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSL----N 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N+  
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEITT 308
               + +    +I D  +V   +  T +   E+ ++      +     + K  +A EI  
Sbjct: 244 -DANDIYGKVMSIPDGMIVKHYELATDIHPDEVAKIKTRLEEENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASVKAEVNFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|291295232|ref|YP_003506630.1| tyrosyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470191|gb|ADD27610.1| tyrosyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 426

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 92/427 (21%), Positives = 167/427 (39%), Gaps = 40/427 (9%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G +  I     L  L S   +T  +G D T   +H GH   L  +   Q+ GHK + ++G
Sbjct: 13  GAVEIIPQEDLLKKLHSGKKLTVKLGLDPTRPDIHIGHAVVLRKMRQFQELGHKVVLIIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T++IGDPS R ++R  +  +E + N +         +          +  N  WL ++
Sbjct: 73  DFTAMIGDPSGRSKTRPPLTLEETRANAKSYVEQVGKILITTDPA-RFELRYNSEWLENL 131

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            + +++R      +V +ML  E  + R      +S  EF Y   Q YD V       C +
Sbjct: 132 GFKEVIRLTSL-LTVAQMLEREDFKKRYTEGVPISIHEFLYPFAQGYDSV----PIACDV 186

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           +MGG+DQ  N++ G ++       K  A   PLL    G KM K+    I + +    P 
Sbjct: 187 EMGGTDQKFNLLVGREVQAAYGLEKQVAFLMPLLVGGDGQKMSKSYDNYIGITE---EPS 243

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL------QGKEIN-----EAKKIIAT 304
             ++    ++D  + ++ +  T L   EI  + +                   A+ +I  
Sbjct: 244 EIFRKLMKVEDPYLQTYFELCTDLAPEEIKEVLEQGGPVGAHRVLARLLTGAYAQPLIPA 303

Query: 305 EITTMVHGR-EEAEKAATA-------------AMECFDMSIHSQHMPTISISKDEVSRG- 349
            +    +     + +A                           + MP + +   E+  G 
Sbjct: 304 RLDKAWYESLGYSWEAHGHDQGGAPVVRQAEARYYEIAHGGIPEQMPEVRLQASELLEGR 363

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + +L L   AG   S  EARR ++   ++++  ++++ KL++ L        + L  GK 
Sbjct: 364 IAVLKLFTLAGLTASNGEARRLIEQKGLRLDGQVLTDPKLEVVLS-----QPVVLQRGKD 418

Query: 410 NHIICHL 416
             +   L
Sbjct: 419 KFVRVVL 425


>gi|289666308|ref|ZP_06487889.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289671118|ref|ZP_06492193.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 403

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 95/411 (23%), Positives = 159/411 (38%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L S   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEILKLDQLEVRLKSGMPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILD----RERTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++      +V RML  +    R   +Q ++  EF Y ++Q YD V L    
Sbjct: 126 FGQMSAADMIKLSAQH-TVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I +N+ 
Sbjct: 182 -ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTL----PMSEIDRMAKLQGKEINEAKKIIATEI 306
                +       I D     +   L+          +            E K  +A E+
Sbjct: 241 ---AIDIVTKTMKIGDELTWRWIDLLSFDISVAEALRLKEQVVSGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   I     + G+ + +L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEI--LVPAEGLRIASLLTTAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++I+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVRIDGEVMEDASRV-----FTQGFEGLIQVGKRNFARVSLV 401


>gi|121609599|ref|YP_997406.1| tyrosyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121554239|gb|ABM58388.1| tyrosyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 410

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 105/413 (25%), Positives = 172/413 (41%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L     +   +   +G D TA  +H GH   L  L  LQ  
Sbjct: 20  EISLRGAHELLPQDEWVKKLVRSEATGQPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS+IGDPS R+ +R  +  ++IQ N E      S  +          + 
Sbjct: 80  GHQVIFLIGDFTSLIGDPSGRNHTRPALTPEQIQANAETYYRQASLVLDPA----RTEIR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         +  + + ++V RM+  E    R    QS+S  EF Y ++Q YD V 
Sbjct: 136 YNSEW-SEPLGAQGMIRLAAMYTVARMMEREDFHKRYTTGQSISVHEFLYPLMQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L           LT PLL       KM K+ +  I
Sbjct: 195 LK----SDLELGGTDQKFNLLMGRHLQHEHGQEPQCVLTMPLLVGLDGVDKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
            + +   + Y       +I D  +  +   L+   ++ I  +        N  +AK ++A
Sbjct: 251 AITESANTMYA---KLLSIPDTLMWDWYPLLSWRSLAGIAALKAEVAGGRNPKDAKVLLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   HG   A+ A    +           +P    +       +G+  L+ +AG A 
Sbjct: 308 KEITARFHGAAAADAAEQDFIVRSQGG-----VPDAIAALTLSGAPLGIGVLLRQAGLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST+EA R +  N ++++ S++S++ L++        G   L  GK+      L
Sbjct: 363 STSEAHRLIDGNGVRVDGSLVSDKGLKLGA------GTYVLQVGKRRFARVTL 409


>gi|148379187|ref|YP_001253728.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933038|ref|YP_001383564.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936237|ref|YP_001387113.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148288671|emb|CAL82752.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929082|gb|ABS34582.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932151|gb|ABS37650.1| tyrosine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 400

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 178/406 (43%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPMTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +   E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQDEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L     
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLK---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N+  
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ ++      +     + K  +A EI  
Sbjct: 244 -DANDIYGKVMSIPDGMIVKYYELATDIHPDEVAKIKARLGEEKVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + +  I ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASVKAEVNFKNIFQQGNIPEDIDIIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|302143636|emb|CBI22389.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 129/418 (30%), Positives = 199/418 (47%), Gaps = 73/418 (17%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 54  IPLHRSNVIEILEQRGLVDSITSP-ILRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 112

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +      
Sbjct: 113 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNR---- 168

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                                   G   SV  M++ ESV+ RL+ EQ +S+ EF Y +LQ
Sbjct: 169 --------------------STTNGGDDSVGTMMAKESVKKRLESEQGMSYTEFTYQLLQ 208

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGK 239
            YDF+ L +N    +Q GGSDQWGNI  G +L  ++      + LT PLL  + GTK GK
Sbjct: 209 GYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTKFGK 268

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           +  GAIWL+  M SPY F+QY+ ++ DADVV                             
Sbjct: 269 SEDGAIWLSPAMLSPYKFYQYFFSVPDADVVR---------------------------- 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
                               A   ++   +   ++ +P+ S+S DEV   + LL L +  
Sbjct: 301 ------------------PGAETKLDWKTIEGIAKDVPSCSLSYDEV-LNLSLLDLSIST 341

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S + ARR LK   + +NN+ I +E  +I+ +D      + LS GKKN ++  + 
Sbjct: 342 GLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLLLSAGKKNKVVVRIS 399


>gi|13357674|ref|NP_077948.1| tyrosyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761932|ref|YP_001752200.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920426|ref|ZP_02691049.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508734|ref|ZP_02689892.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701925|ref|ZP_02554437.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|81549680|sp|Q9PR27|SYY_UREPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029780|sp|B1AIA6|SYY_UREP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|11271047|pir||H82931 tyrosyl tRNA synthetase UU117 [imported] - Ureaplasma urealyticum
 gi|6899074|gb|AAF30523.1|AE002112_4 tyrosyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827509|gb|ACA32771.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902871|gb|EDT49160.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675661|gb|EDT87566.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700667|gb|EDU18949.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 415

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 123/420 (29%), Positives = 216/420 (51%), Gaps = 20/420 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               +  L  R  I+ I+N  +L     +     Y+G+D +A SLH G+   +MLL   +
Sbjct: 1   MHSLIKDLKARNLINNITNEEKLIKALEKNK-GIYVGFDPSADSLHLGNYIMIMLLKRFR 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
               K ++L+GG T +IGDPS +   R ++    +++NI KIK     F       T++ 
Sbjct: 60  LYNIKTLALVGGATGMIGDPSGKSAERNLLDKTILEKNIAKIKFQLEKF-------TNSQ 112

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  +  ++ ++D LR++G   ++N +L  E + SRL     +S+ EF+Y +LQ YDF
Sbjct: 113 VINNYVFYENMTFLDFLRDVGKLININYLLEKEIINSRL--SVGISYTEFSYNLLQGYDF 170

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLS 242
           ++L KN +  +Q GGSDQWGNI  GI++  +          LT  LLT + G K GK+  
Sbjct: 171 LQLYKNDNIAIQAGGSDQWGNITTGIEMIRKNLGDDNIACGLTINLLTNSEGKKFGKSEK 230

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
           GAI+L++  ++ Y  +Q+  N  DADV      LT + + EI ++ +          A+K
Sbjct: 231 GAIYLDENKSTVYEMYQFLINQSDADVEKLLNFLTLIDVEEIKKIMQAHKNNPALRVAQK 290

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLT 354
            +A  +   +HG+++ E+A   +   F+ SI + +   + I+   +         + ++ 
Sbjct: 291 ALAKAVVVDIHGQQKYEQALHISEVLFNGSISTLNQEELEIAIKSLPATKLDKDEIKIID 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  A  ++S   AR  L + +I IN+  I++E   +K QD  +     +  GK+N+ + 
Sbjct: 351 LLNLANISSSNRIARDFLNTGSILINDIKINDENFLVKKQDAINQKFSIIRKGKRNYFLI 410


>gi|221194508|ref|ZP_03567565.1| tyrosyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185412|gb|EEE17802.1| tyrosyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 403

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 103/401 (25%), Positives = 171/401 (42%), Gaps = 21/401 (5%)

Query: 20  QISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI     L    ++   +T  +G D T+  LH GH   L  +   Q  GH    ++G GT
Sbjct: 17  QIVPLEGLKEKLAKGKPLTIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGNGT 76

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  + S++I+ N +         +          +++N  W+  +   
Sbjct: 77  ALIGDPSGRDSTRPPLTSEQIEVNAQTYVEQAMKILDPD----RTTVVHNGDWIKPMNL- 131

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           + +  + S F+V R+L  E    R   +QS++  EF Y +LQAYD V +       ++MG
Sbjct: 132 ETMLSLMSKFTVARILEREDFSKRYHNQQSIALHEFIYPVLQAYDSVMIK----ADVEMG 187

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL          ALT PLL  T    KM K+    I L      P + 
Sbjct: 188 GNDQIFNLLAGRDLMRDEGMEPQIALTMPLLEGTDGVKKMSKSYGNYIGLT---DEPADM 244

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---AKKIIATEITTMVHGRE 314
           +    +I D  V  + +  +TL + EID +         +    K+ +   I  + HG +
Sbjct: 245 FGKIMSIPDELVARYYRLCSTLSIDEIDAIDASFEDGTADPYALKRALGRNIVELYHGAD 304

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG-LLTLIVKAGFATSTNEARRHLK 373
           +A +A  A    F        +   S+      +G+  L  L+V+   + S  +ARR + 
Sbjct: 305 KAAQAEEAFDALFKKHEIPDDVAEFSVELVRNEQGLVYLPKLMVEVKLSASAGDARRLID 364

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              +KIN   ++ +   +     D      L  GK+     
Sbjct: 365 GGGVKINGEALAPKSYNVDPDLLDH---AILQAGKRRFAKL 402


>gi|222528887|ref|YP_002572769.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455734|gb|ACM59996.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 396

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 102/408 (25%), Positives = 187/408 (45%), Gaps = 28/408 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ++G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I +
Sbjct: 11  KKGAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILI 70

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +          +  N  WL 
Sbjct: 71  IGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQVLKILDPQ----KTTIRYNSEWLE 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q YD V +    + 
Sbjct: 127 PMNFLDVI-NLASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EA 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            +++G ++Q  NI+ G  L +       ++  L   L+ T    KM K+L   I +N+  
Sbjct: 182 DVELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINEP- 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++S+ +  T L   EI+ + +   +      +AK  +A EI  
Sbjct: 241 --PNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A+KA    +  F        +P + ++  +V     L   +V+    +ST+E 
Sbjct: 299 LYHGEEAAKKAEEEFIRVFQKKDVPDDIPEVELANAKVY----LPRFMVENKLCSSTSEG 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R +KS A+K+N   ++   ++++  D        L  GK   +   L
Sbjct: 355 MRLIKSGAVKLNGEKVNELDIELQNGD-------VLQVGKLKFVKVKL 395


>gi|296125527|ref|YP_003632779.1| tyrosyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296017343|gb|ADG70580.1| tyrosyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 396

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 102/408 (25%), Positives = 174/408 (42%), Gaps = 27/408 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  RG    I      + L S   +T   G+D TA  +H GH   L  +   Q  GHK 
Sbjct: 11  ELITRGISEVIGLEEIKEKLKSGKQLTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHKV 70

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T  IGDPS + ++R  +  +++ +N E  K      +         ++  N  
Sbjct: 71  VFLIGDFTGRIGDPSGKTKTRPRLTLEDVLKNAETYKQQVFKILDP----EKTIVEFNSK 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + + D+L  + S ++V +M+  +    R K  Q +S +EF Y + Q YD V L   
Sbjct: 127 WLEKMSFADVLG-LTSRYTVAQMIERDDFSKRYKNGQPISIMEFLYPLAQGYDSVAL--- 182

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +C +++GG+DQ  N++ G  L +         +T PLL       KM K+L   I +  
Sbjct: 183 -ECDVELGGNDQKFNLLVGRTLMKEYGLSPQAVITVPLLEGLDGVEKMSKSLGNYIGIY- 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEIT 307
              S  + +    +I D  +  + + LT +P+ +I         G+     K I+A EI 
Sbjct: 241 --DSAKDMYGKAMSIPDNLISKYMELLTDIPIEDIKNYTKSMENGENPRNIKGILAKEIV 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG EEA  A       F        +  +SI+KD+      +L ++     + S + 
Sbjct: 299 KIYHGEEEANNAEEEFKRIFSSKGLPDEIDEVSINKDD-----NILNILSVCMPSESKSN 353

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +R +   ++ ++N  I++    I  +         L  GK+N     
Sbjct: 354 LKRLVSQGSVSLDNEKINDINTLISKEG-------ILKVGKRNFFKIK 394


>gi|261416275|ref|YP_003249958.1| tyrosyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372731|gb|ACX75476.1| tyrosyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327342|gb|ADL26543.1| tyrosine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 405

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 185/419 (44%), Gaps = 30/419 (7%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
            + L IL  RG +  I    EL+    +       +   +G D TA  +H GH   +  L
Sbjct: 7   KEQLEILM-RG-VTDIVPQDELEKKLQKSYETGKPLRIKMGVDPTAPDVHFGHTVVMRKL 64

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH  + ++G  T+ IGDPS R+++R  +  +++ EN ++ +  F   ++     
Sbjct: 65  RQFQDLGHTVVLIVGDYTAQIGDPSGRNKARPRLTHEQVLENAKEYQEQFFKVVRRDQ-- 122

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W   + +   + E+   F+V +ML  E   +R      +S  EF Y ++Q
Sbjct: 123 --VEIHYNGEWFSKLPF-SKVTELMGQFTVAQMLEREDFHNRYTANTPISLHEFMYPMMQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGK 239
            YD V +       +++GG+DQ  N++ G DL           L  P+L  T    KM K
Sbjct: 180 GYDSVAIQ----SDVELGGTDQKFNVLRGRDLQIFEGMEPQIGLFMPILLGTDGKVKMSK 235

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEIN 296
           ++   + LN+     Y+      ++ D  V ++ + LT +P+ E+ +M           N
Sbjct: 236 SIGNYVGLNEPADVMYH---KIYSLSDNIVENWYELLTNIPLDEVKQMMADIAAGKMNPN 292

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +AK  +A +I T  +G E AE AA    E    +     +P+ ++     +   G L L+
Sbjct: 293 DAKHRLAIDIVTQYYGAEAAEAAAAKEREIHSGN----AIPSDALECSVDAGSYGALDLL 348

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V      S  EARR +++  +KI    +++ + QI+++       + +  GK+     +
Sbjct: 349 VNIKAFASKGEARRMVQNGGVKIGGEKLADPQAQIEIK---GGDQLVVQVGKRKFFKVN 404


>gi|255655541|ref|ZP_05400950.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296451532|ref|ZP_06893267.1| tyrosine--tRNA ligase [Clostridium difficile NAP08]
 gi|296880119|ref|ZP_06904086.1| tyrosine--tRNA ligase [Clostridium difficile NAP07]
 gi|296259597|gb|EFH06457.1| tyrosine--tRNA ligase [Clostridium difficile NAP08]
 gi|296428844|gb|EFH14724.1| tyrosine--tRNA ligase [Clostridium difficile NAP07]
          Length = 402

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 88/409 (21%), Positives = 172/409 (42%), Gaps = 31/409 (7%)

Query: 18  IHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + + +EL             +   +G D +A  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDDLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ + ++++  N +  +      +     K   ++  N  WL
Sbjct: 75  IIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLD----KEKTIVRFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + + ++ +  +V RML  E  + R + +  +S  EF Y ++QAYD + L    +
Sbjct: 131 AKLNF-EDVIKLAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIAL----E 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L           +  PL+       KM K+L   I +++E 
Sbjct: 186 ADIELGGTDQRFNLLMGRSLQREFGMESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
              Y   Q    I D  ++ +   +T +   E++++            + K  +A EI T
Sbjct: 246 GIMY---QKSMEIPDELIIKYYNLVTDVHPDEVNKIESQLKDGSVNPRDIKMNLAREIVT 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F      + + TI +       G  L+ ++V      S +E 
Sbjct: 303 LYHGEESAREAEERFKSVFQKGQIPEDIQTIQVK----EDGFDLIEVLVVNEIVKSKSEV 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR      +K+N   + +    +K         + +  GKK  +   L 
Sbjct: 359 RRLASQGGVKVNGEKVEDLSTIVKES------ELVVQIGKKKFVKIELV 401


>gi|297183411|gb|ADI19544.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_27E13]
          Length = 404

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 105/423 (24%), Positives = 184/423 (43%), Gaps = 25/423 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +     L I  +RG    +           +  +   +G+D TA  LH GH   +  +
Sbjct: 1   MISKDKQLLEI--KRGTEEILVEKEFAKRFHQKKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I +N    +      +      
Sbjct: 59  RQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTREQIDKNAATYEKQIFKILDKDL-- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +    L+  I S ++V RML  +  + R K    +S  E  Y ++Q
Sbjct: 117 --TRIEFNSSWMQQVDSSKLIE-IASKYTVARMLERDDFKQRFKTGNPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
           AYD V L    +  +++GG+DQ  N++ G  L +    P   A+T PLL       KM K
Sbjct: 174 AYDSVAL----EVDVELGGTDQKFNLLVGRHLQQLYGQPPQTAITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T +  I L      P +      +I D  +  + + L+   + EI   +    +GK   +
Sbjct: 230 TANNYIALT---DHPKDMLGKIMSISDELMWRYFELLSARSIDEIGLLQKQVKKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT--- 354
            K ++A EI    HG++ +  A  + +  F      + + ++SI+  EV    G++    
Sbjct: 287 IKFLLAEEIVERFHGKQSSSDAKESFLRQFQQGQIPEEIKSVSINYSEVESEPGIVNMAK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  A   TS +E  R +K+ ++++    I + +LQ      D+     LSFGK      
Sbjct: 347 LLYSANLVTSVSEGHRAIKAGSVRLEGEKIESSQLQ-----MDANSKHILSFGKHRFAAV 401

Query: 415 HLC 417
              
Sbjct: 402 KFI 404


>gi|330795995|ref|XP_003286055.1| hypothetical protein DICPUDRAFT_30367 [Dictyostelium purpureum]
 gi|325083963|gb|EGC37402.1| hypothetical protein DICPUDRAFT_30367 [Dictyostelium purpureum]
          Length = 465

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 141/441 (31%), Positives = 225/441 (51%), Gaps = 34/441 (7%)

Query: 2   PAFKSDFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
                + + IL  RGFIHQ++     +  +  +  +T Y G+D TA SLH G+L  LM++
Sbjct: 30  TTKNENVIDILKARGFIHQMTETDDVMRSITEKKKITFYTGFDPTADSLHIGNLLTLMVM 89

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             L+K GH PI+++GG T++IGDPS +   R ++    I+ N+  ++    + +      
Sbjct: 90  SHLKKHGHNPIAIVGGATALIGDPSGKSTDRPVLSEDFIENNLVYLRENIRTIL-----G 144

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ---SLSFLEFNYM 177
            D  +LNN  W  ++  I+ LR+IG++F V  M+  + +++RL  E     +S+ EF Y 
Sbjct: 145 EDTTILNNIDWNKNLSIINFLRDIGTYFRVGTMIKKDFIQNRLNSENDDSGISYTEFTYS 204

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA DF  L  N  C LQ+GGSDQWGNI+ GIDL  +    +   LT PLLT + G K+
Sbjct: 205 LLQANDFAHLYHNNKCELQIGGSDQWGNIVSGIDLIRKRYKGQGMGLTIPLLTNSEGQKL 264

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   +IWL+   TS Y F+QYW  I DADV    K  T LP++EI  +     +    
Sbjct: 265 GKSEGNSIWLSPHKTSSYMFYQYWIQIADADVEKLLKLFTYLPLNEISEIVSQHNQNPHL 324

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             A+K ++ E+T +VHG++  E+A       F    +S  +  +  + + +  G  +  L
Sbjct: 325 RTAQKKLSEEVTRLVHGQKGLEEALLTTEILFGK--YSDALSNLDENNNCIIEGKSVGDL 382

Query: 356 IVKAG---FATST----------NE--------ARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + KA     + S           +E        AR+      + +N+ +I++ K+ +   
Sbjct: 383 LSKANYISLSKSKYLNQKIVNILSEVSGISSTQARKLFTDKVVFMNSKLINDPKITLAEN 442

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
              S   I L  GKKN  +  
Sbjct: 443 QLISNHFILLKSGKKNFHLIK 463


>gi|297170374|gb|ADI21408.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_21A16]
          Length = 404

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 108/423 (25%), Positives = 183/423 (43%), Gaps = 30/423 (7%)

Query: 4   FKSD--FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            KS+   L IL ERG    I       +L S+  +    G+D T+S LH GH   L  L 
Sbjct: 1   MKSNKEILEIL-ERGVEEIIPEKDFRSLLRSKKKLIIKAGFDPTSSDLHLGHTVLLNKLK 59

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GHK I L+G  T  IGDPS  +E+R  +   ++++N +         +       
Sbjct: 60  QFQDLGHKIIFLIGDFTGQIGDPSGVNETRPSVSKSDLKKNAKTYSEQVFKILD----SK 115

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N +W   +K  ++++   S  +V RML  +   +R K  + +S  E  Y ++Q 
Sbjct: 116 KTKIEYNSSWFDKMKPSEIIKLASSM-TVARMLERDDFSNRFKGNRPISIHELLYPLVQG 174

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKT 240
           YD   L       +++GG+DQ  N++ G D+    K  +   +T P+L       KM K+
Sbjct: 175 YDSYALK----ADIELGGTDQKFNLLVGRDIQRSNKMKEQVVMTMPILEGLDGVKKMSKS 230

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEA 298
           L+  I L ++   P   +    +I D  +  +   L+  P   I+       +G    E 
Sbjct: 231 LNNYIGLKEK---PEMMFGKIMSISDELMWKYYDLLSFKPNKVINSYKAEVKKGANPMEF 287

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K ++  EI    H ++ A+         F        +  +SI  +  +  + L+ L+ +
Sbjct: 288 KILLGEEIVERFHSKKAAQDTKEEFKNRFSKKKAPSKIKKVSIKIN--AEDISLIDLLAE 345

Query: 359 AG-----FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
                    +S +EARR +K +A+KI+N+ I++EK  +K              GK  H+I
Sbjct: 346 PKLKKNILCSSKSEARRMIKQSAVKIDNNRINDEKFFVK-----KGSKHTFQVGKHKHLI 400

Query: 414 CHL 416
             L
Sbjct: 401 IDL 403


>gi|310779543|ref|YP_003967876.1| tyrosyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748866|gb|ADO83528.1| tyrosyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 405

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 104/406 (25%), Positives = 180/406 (44%), Gaps = 30/406 (7%)

Query: 11  ILSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG    IS     D     L +   +   +G D T S LH GH   L  L   Q  
Sbjct: 12  EILKRGVEEIISEKELEDKIKKSLETGKPLVIKLGIDPTGSDLHIGHAVPLRKLRQFQDL 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   L+G  T+ IGDP+ + E+R+M+ S++IQ NIE         +          ++
Sbjct: 72  GHRVKFLIGTFTARIGDPTGKSETRKMLSSEDIQRNIETYLEQVKLILDL----EKTEVV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +   + + ++ S F+V +M+  E    RL   + +S +EF Y ILQ YD V 
Sbjct: 128 YNGDWLEKLSL-EDVLKLLSQFTVAQMVQREDFSKRLSEGKPVSLVEFMYPILQGYDSVA 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           +    +  +++G ++Q  NI+ G DL +     +   +  P+L       KM K+L   I
Sbjct: 187 I----EADVELGATEQKFNILRGRDLQKNAGQQQQVCMMMPILVGLDGVEKMSKSLGNYI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKII 302
            + +    P + +    +I D  + ++ +  T + + EI  + +          + KK +
Sbjct: 243 GVTEA---PNDMFGKVMSISDDLMWNYYEVATDVALEEIKSLKEGVANGTIHPMDCKKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAGF 361
             EI  + H  E  ++A       F     +  +P + I  DE    +  + L+V +  F
Sbjct: 300 GEEIVKIYHSEEAGKQAREWFENVFSNKNMAVDLPEVKIEADE----INAIDLLVKELMF 355

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             ST+EARR +     KIN+  + + K  IK++D      + +  G
Sbjct: 356 LKSTSEARRLISQGGFKINDEAVKDLKAVIKIED-----GMVVRAG 396


>gi|221139710|ref|NP_001137392.1| tyrosyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|326679969|ref|XP_003201421.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Danio
           rerio]
          Length = 474

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 130/426 (30%), Positives = 203/426 (47%), Gaps = 25/426 (5%)

Query: 15  RGFIHQISNP----RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG +           E+  L   G  + Y G+D TA SLHAG+L  ++ L   +  GH  
Sbjct: 45  RGLLKDSFPEVAAQAEIPDLLRSGPQSIYCGFDPTADSLHAGNLLAIIGLLHFRSAGHHI 104

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK--------TD 122
           I+L+GG T+ IGDPS R   R  +    +QEN   I         +              
Sbjct: 105 IALLGGATAQIGDPSGRQTERERLSPAAVQENARGILESLHRIFTHHELYFCPDSSRLGR 164

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +LNN +W      ++   E+G  F +  MLS  SV++RLK  + +SF EF+Y + QA+
Sbjct: 165 LTVLNNRSWYKDYDLLEFFSEVGRSFRMGTMLSRHSVQTRLKSAEGMSFTEFSYQLFQAF 224

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF +L + + CR+Q+GG+DQ GNI+ G +   R    +++ LT PL+TT+ G K+GKT  
Sbjct: 225 DFYQLHQLHGCRIQLGGTDQLGNIMSGHEFIHRKTGEEVYGLTVPLVTTSMGDKLGKTAG 284

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
            A+WLN++ TSP+ F+QY+  + D  V  + K  T L +SE++ + + Q K+     A K
Sbjct: 285 NAVWLNRDKTSPFEFYQYFLRLPDNSVERYLKLFTFLSLSEVENLMEQQRKDPGKRIAHK 344

Query: 301 IIATEITTMVHGREEAEKAATA----------AMECFDMSIHSQHMPTISISKDEVSRGM 350
            +A E+T +VHG++  E A             A+E    +   +        +  +  G 
Sbjct: 345 RLAAEVTKLVHGKDGLESAKRCTTALYHSSIEALEQMSDTELQEIFREAPFHEFFLEPGT 404

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKLSFGKK 409
            +L    +A          + +K   + IN+    N +   I  Q   S G   +  GKK
Sbjct: 405 TVLDACRRARAIPDGPRGYQMIKDGGVWINHQRAENPEQVLIVGQQILSNGLSLIRVGKK 464

Query: 410 NHIICH 415
           N  I  
Sbjct: 465 NFHILK 470


>gi|50083309|ref|YP_044819.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81394066|sp|Q6FG10|SYY_ACIAD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49529285|emb|CAG66997.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 404

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 94/419 (22%), Positives = 172/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 1   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLRIKAGFDPTAPDLHLGHTVLINK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 61  LKAFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLTREQVEANAKTYQEQVFKILDP--- 117

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 118 -NKTKVRFNSEWFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 176 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D  +  + + L+   + EI  +        N  
Sbjct: 232 KSLGNYIGVF---DAPGAMYQKVLSMPDTLIERYFELLSFKSLDEIQGLLDEMANGRNPQ 288

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + KKI+A E+    H  + A  A   A          +  P ++IS+ E    + + +++
Sbjct: 289 DLKKILALELVERFHDADAAANAHKGAGNIITEGEIPEGTPEVTISRGEFGGEIFIASIV 348

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +  +A+  +   A+K++  ++ +    +K           +  GKK      
Sbjct: 349 RLAGLTKNAAQAKDAVSRGAVKVDWQVV-DANFSVKE-----NKTYLIQAGKKAIAQVT 401


>gi|118082933|ref|XP_416363.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 548

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 128/442 (28%), Positives = 216/442 (48%), Gaps = 35/442 (7%)

Query: 6   SDFLSILSERGFIHQISN----PRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLML 59
              L+   ERG   ++        +L+ L   G   V  Y G+D TA SLH GHL  +M 
Sbjct: 106 KGLLAEQCERGLFQEVFPAQGADEQLEALLEPGRPPVAVYCGFDPTADSLHVGHLPAVMA 165

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--- 116
           L   Q+ GH  ++++GG T+ +GDPS R+ +R  + ++ ++ +   ++      ++    
Sbjct: 166 LLHFQRAGHTVLAVVGGATARLGDPSGRERAREPLEAERVRAHARGLREGLGRLLENHRA 225

Query: 117 -------GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                  G     A +L+N  WL     +D L   G    +  +LS ++ ++RL+  + +
Sbjct: 226 LFWPAGGGRPLGRAELLDNAWWLSREPLLDFLCGAGGRLRMGTLLSRQACQARLRSAEGM 285

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           S  EF Y  LQAYDF+ L +++ CR+Q+GG+DQ GNI+ G +L  ++    +F +T PL+
Sbjct: 286 SLAEFLYPALQAYDFLHLHRHHGCRVQLGGADQMGNIMSGYELVTKMTGTDVFGITVPLI 345

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           T+ +G K+GKT   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +
Sbjct: 346 TSTTGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDDIVEKYLKLFTFLPLEEIDHIME 405

Query: 290 LQGKEINEA--KKIIATEITTMVHGREEAEKAATA-------------AMECFDMSIHSQ 334
           +  +E  +   +K +A E+T +VHGRE  E A                AM   ++    +
Sbjct: 406 MHAREPEKWGPQKRLAAEVTKLVHGREGLESAKRCTKALYHSSVEALEAMSDQELQELFR 465

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL- 393
             P+  +    +  G  LL L  KA          + +    + +N   ++N +  + L 
Sbjct: 466 QAPSAEL---ILEPGTTLLDLCRKANAIPHGPSGYQKITDGGVSVNGIRVTNPETVLILG 522

Query: 394 QDFDSTGNIKLSFGKKNHIICH 415
           Q     G   L  GKKN+ I  
Sbjct: 523 QHILKNGVSLLRIGKKNYYIIK 544


>gi|78776919|ref|YP_393234.1| tyrosyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|115305830|sp|Q30SN2|SYY_SULDN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78497459|gb|ABB43999.1| tyrosyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 399

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 104/423 (24%), Positives = 177/423 (41%), Gaps = 35/423 (8%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLM 58
              + +S +  RG   +I +   ++ L           T   G+D TA  LH GH   L 
Sbjct: 1   MLKEAISEIQ-RGC-AEIIDEPRVEKLLKAYFEKGETYTVKAGFDPTAPDLHLGHTVLLQ 58

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   QK G +   L+G  T+ IGDPS +  +R+++ +++I EN +  K      +    
Sbjct: 59  KLAIFQKYGARVQFLIGDFTAQIGDPSGKSATRKILSTEDILENAKSYKEQVFKILD--- 115

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
             +   ++ N  WL +      +  + + F+V RML  +    R K   S++  EF Y +
Sbjct: 116 -ASKTDVVFNSEWL-NALGASGMITLTTTFNVARMLERDDFDKRYKSGTSIAISEFLYPL 173

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTK 236
           LQ YD V L       +++GG+DQ  N++ G  L        +   L  P+L       K
Sbjct: 174 LQGYDSVHLK----SDIEVGGTDQKFNLLMGRHLQRSYDVGKEQAVLMVPILEGLDGVQK 229

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--- 293
           M K+L   I +++    P   +    +I D  +  + + L+T  ++EI+R+         
Sbjct: 230 MSKSLGNYIGVSEN---PNEIFGKVLSISDELMWRYYELLSTKTLAEIERLKSGVEAGTL 286

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              + K+ +A EIT   H  E A+ A          +     M   S      S  + + 
Sbjct: 287 HPKKVKEELAIEITARFHSSESAQNAKDEFDRVHSNNQIPTEMDEFS-----SSEAISIT 341

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      ST++ARR +K  A++IN   I +E L ++       G   L  GK+    
Sbjct: 342 KALVDCNLTPSTSQARRDIKQGAVRINQEKIDDETLSLES------GEYILQVGKRKFAK 395

Query: 414 CHL 416
             +
Sbjct: 396 LKV 398


>gi|26333055|dbj|BAC30245.1| unnamed protein product [Mus musculus]
          Length = 403

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 127/399 (31%), Positives = 199/399 (49%), Gaps = 20/399 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 1   TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSA 60

Query: 97  QEIQENIEKIKGIFS-------SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           + ++ N   ++                G       +L+N  W      +D L  +G  F 
Sbjct: 61  ECVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFR 120

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 121 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSG 180

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++    D  V
Sbjct: 181 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDDSV 240

Query: 270 VSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L     E   A+K +A E+T +VHG+E  + A       +
Sbjct: 241 ERYLKLFTFLPLPEIDHIMQLHVKEPEKRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALY 300

Query: 328 DMSIHSQHM----------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +  +             S S+  +  G  ++    KA          R +    +
Sbjct: 301 HSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGYRMITEGGV 360

Query: 378 KINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
            IN+  ++N +  + + Q     G   L  GK+N  I  
Sbjct: 361 SINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYIIK 399


>gi|159027684|emb|CAO89549.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 405

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 100/394 (25%), Positives = 163/394 (41%), Gaps = 21/394 (5%)

Query: 23  NPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L  L       +   +G D T S +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 27  PRENLTQLLQTIDRPLRIKLGIDPTGSDIHLGHSIPFRKLRAFQDAGHVAVVIIGDFTAR 86

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + S+E++ N E         + + T      +  N  WL  +    +
Sbjct: 87  IGDPTGKSEVRKQLTSEEVRANAENYLAQLRPILDFNTP-NRLEIRYNSEWLGKLDLSQI 145

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  + +  +V +ML+ E    R  RE  +   EF Y ++Q YD V +    +  +++GG+
Sbjct: 146 LELLSTM-TVGQMLAKEGFSERYDRENPIFLHEFLYPLMQGYDSVAV----EADVELGGT 200

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL +       F L  P+L  T    KM K+L+  + L +   S Y+   
Sbjct: 201 DQKFNIAVGRDLQKYFGKKPQFGLLLPILIGTDGSQKMSKSLNNYVGLRESALSMYS--- 257

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+               EA+K +A E+    HG EEA  A
Sbjct: 258 KLEKTPDALLKDYYELLTNLPLDARAS-------NPREAQKQLAIEVVAQFHGTEEAFNA 310

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A E       +        S   V+  + L  L+   G   S+ E RR ++  A++I
Sbjct: 311 QKTAQEIVLQGNTAAAASVPEFSLAAVTFPLKLFYLLSATGLCKSSGEGRRQIQGGAVRI 370

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           ++  I++     +  +  +     L  GK   I 
Sbjct: 371 DSEKITDVDKSFETAEALAGK--VLQVGKNKFIR 402


>gi|322805525|emb|CBZ03089.1| tyrosyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 400

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 180/406 (44%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPMTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +   E+  N +  +      I          +  N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQDEVMFNAKTYEEQIFKIIDKD----KTDLKFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D +     + +V RML  E  + R +   S+   EF Y +LQA+D V L     
Sbjct: 131 GKLSLRDTIELTSKY-TVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLK---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL  T    KM K+L   I +N+  
Sbjct: 186 ADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   +I ++    + +     + K  +A EI  
Sbjct: 244 -DANDIYGKVMSIPDKMIVKYYELATDIHPDKIAKIKARLEEEKVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++  E      ++ LI+KA FA S NEA
Sbjct: 303 LYHGEEASVKAEVNFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIIKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|166362864|ref|YP_001655137.1| tyrosyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166085237|dbj|BAF99944.1| tyrosyl tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 405

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 100/394 (25%), Positives = 169/394 (42%), Gaps = 21/394 (5%)

Query: 23  NPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L  L   +   +   +G D T S +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 27  PRENLTQLLQTTDRPLRIKLGIDPTGSDIHLGHSIPFRKLRAFQDAGHVAVVIIGDFTAR 86

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + S+E++ N E         + + T      +  N  WL  +    +
Sbjct: 87  IGDPTGKSEVRKQLTSEEVRANAENYLAQLRPILDFNTP-NRLEIRYNSEWLGKLDLSQI 145

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  + +  +V +ML+ E    R  +E+ +   EF Y ++Q YD V +    +  +++GG+
Sbjct: 146 LELLSTM-TVGQMLAKEGFSERYDQEKPIFLHEFLYPLMQGYDSVAV----EADVELGGT 200

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI+ G DL +       F L  P+L  T    KM K+L+  + L +   S Y+   
Sbjct: 201 DQKFNIVVGRDLQKYFGKTPQFGLLLPILIGTDGSQKMSKSLNNYVGLRESALSMYS--- 257

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+  +            EA+K +A E+    HG+EEA KA
Sbjct: 258 KLEKTPDALLKDYYELLTNLPLDAMAS-------NPREAQKQLAIEVVAQFHGKEEALKA 310

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A E       +        S   V+  + L  L+   G   S+ E RR ++  A++I
Sbjct: 311 QKTAQEIVLQGNTAAAASVPEFSLAAVTFPLKLFYLLSATGLCKSSGEGRRQIQGGAVRI 370

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           ++  I++     +  +  +     L  GK   I 
Sbjct: 371 DSEKITDVDKSFETAEALTGK--VLQVGKNKFIR 402


>gi|297171447|gb|ADI22448.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_05P21]
          Length = 404

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 104/423 (24%), Positives = 183/423 (43%), Gaps = 25/423 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +     L I  +RG    +           +  +   +G+D TA  LH GH   +  +
Sbjct: 1   MISKDKQLLEI--QRGTEEILVEEEFAKRFHQKKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I EN    +      +      
Sbjct: 59  RQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTRKQIDENAATYEKQIFKILDKDL-- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  I    L+  I S ++V RML  +  + R K    +S  E  Y ++Q
Sbjct: 117 --TRIEFNSSWMQQIDSSKLIE-IASKYTVARMLERDDFKQRFKTGNPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
           AYD V L    +  +++GG+DQ  N++ G  L +        A+T PLL       KM K
Sbjct: 174 AYDSVVL----EVDVELGGTDQKFNLLVGRHLQQLYGQSPQTAITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T +  I L      P        +I D  +  + + L+T  + EI   +     GK   +
Sbjct: 230 TANNFIALT---DPPKEMLGKIMSISDELMWRYFELLSTRSIDEICLLQKQVKDGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT--- 354
            K ++A EI    + ++ +  A  + ++ F      + + ++SI+  EV    G++    
Sbjct: 287 VKFLLAEEIVERFYDKQSSGDAKESFLKQFQKGQIPEKIKSVSINYSEVESEPGIVNMAK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A   TS +E  R +K+ ++++    I +++LQ      D+     LSFGK      
Sbjct: 347 VLYLANLVTSVSEGHRAIKAGSVRLEGEKIESKQLQ-----MDANSRHVLSFGKHRFAKV 401

Query: 415 HLC 417
              
Sbjct: 402 KFI 404


>gi|225619193|ref|YP_002720419.1| tyrosyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225214012|gb|ACN82746.1| tyrosyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 398

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 103/408 (25%), Positives = 176/408 (43%), Gaps = 27/408 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  RG    I      + L S   +T   G+D TA  +H GH   L  +   Q  GHK 
Sbjct: 13  ELITRGISEVIGLDEIKEKLKSGKQLTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHKV 72

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T  IGDPS + ++R  +  +++ +N E  K      +         ++  N  
Sbjct: 73  IFLIGDFTGRIGDPSGKTKTRPRLTLEDVLKNAETYKQQVFKILDP----EKTIVEFNSK 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + + D+L  + S ++V +M+  +    R K  Q +S +EF Y + Q YD V L   
Sbjct: 129 WLEKMSFADVLG-LTSRYTVAQMIERDDFSKRYKNGQPISIMEFLYPLAQGYDSVAL--- 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +C +++GG+DQ  N++ G  L +         +T PLL       KM K+L   I +  
Sbjct: 185 -ECDVELGGNDQKFNLLVGRTLMKEYGLSPQAVITVPLLEGLDGVEKMSKSLGNYIGIY- 242

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEIT 307
              S  + +    +I D+ +  + + LT +P+ +I     A   G+     K I+A EI 
Sbjct: 243 --DSAKDMYGKAMSIPDSLISKYMELLTDIPIDDIKNYVKAMENGENPRNIKGILAKEIV 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG EEA  A       F        +  ++I+KDE      +L ++     + S + 
Sbjct: 301 KIYHGEEEALNAEEEFKRIFSSKGLPDEIEEVTINKDE-----NILNVLATCMSSESKSN 355

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +R +   ++ ++N  I++    +  +         L  GK+N     
Sbjct: 356 LKRLVSQGSVTLDNEKINDINALVSKEG-------ILKVGKRNFFKIK 396


>gi|320332623|ref|YP_004169334.1| Tyrosyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319753912|gb|ADV65669.1| Tyrosyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 407

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 91/421 (21%), Positives = 170/421 (40%), Gaps = 25/421 (5%)

Query: 1   MPAFKSDF--LSIL--SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ 56
           M   + +   L  L   +RG +  ++       L     +   +G D T   LH GH   
Sbjct: 1   MTDIRRNVPVLEQLAVLKRGVVDLVTEEDLKTKLERGTPLRVKLGADPTRPDLHLGHAVI 60

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  +   Q  GHK I L+G  T++IGDPS + ++R  +  +E + N           ++ 
Sbjct: 61  LRKMRQFQDLGHKVIMLIGDFTAMIGDPSGKSKTRPPLTLEETRANAVSYLEQCKLVLRS 120

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                +     N  WL  + Y D++  + S ++V R+L  +    RL     +   E  Y
Sbjct: 121 DPEVLEV--RFNGEWLEPMGYADII-RLASKYTVARILERDDFTKRLAAGTPVQMHELLY 177

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT 235
            + Q YD V L    +  +++GG+DQ  N + G  L           +T PLL       
Sbjct: 178 PLTQGYDSVAL----EADVELGGTDQLFNNLVGRALQRDYGQAAQVVMTLPLLVGLDGVE 233

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KM K+L   I L       +  +     + D  ++++   LT L  + I+ +        
Sbjct: 234 KMSKSLDNYIGLT---DEAHEMFAKLMKVPDTLLLNYFTLLTDLSEARIEELLAGHPVT- 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLL 353
             A + +A  +T  +H   + + A           I  +++P++++  +E++    +GL 
Sbjct: 290 --AHRELARAVTAWLHPEADLDAAEERYKAVAKGGIP-ENIPSVTVPTEELNADGVVGLF 346

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+  AG   S   AR+ +++  +K+N    ++ +  +          + L  GK   + 
Sbjct: 347 RLVALAGLEPSNGAARKLIQNRGLKVNGEAATDPQTAVT----IPAEGLVLQKGKDKFVR 402

Query: 414 C 414
            
Sbjct: 403 L 403


>gi|268679288|ref|YP_003303719.1| tyrosyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617319|gb|ACZ11684.1| tyrosyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 402

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 180/426 (42%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M     + L+ +  RG I +I +   +  L  +            G+D TA  LH GH  
Sbjct: 1   MEMKIQNALNEIK-RG-ISEIIDEERIVTLIKKYFEKGETFLVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +  LQK G     L+G  T +IGDP+ ++E+R+ +  + +  N E  K      + 
Sbjct: 59  LLQKMALLQKYGAIVQFLIGDFTGMIGDPTGKNETRKKLTREVVLANAETYKEQVFKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                   +++ N  WL S+     L E+ + F+V RML  E    R K +  +S  EF 
Sbjct: 119 PA----KTVVMFNSEWLGSMSA-SSLIELTTTFNVARMLEREDFEKRYKSQMPISISEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-AS 233
           Y +LQ YD V +     C ++MGG+DQ  N++ G  L        +   +  PLL     
Sbjct: 174 YPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRHLQRVYGIGKEQAVMMMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-- 291
             KM K+L   I + +    P + +    +I D  +  + + L++  + EI R+      
Sbjct: 230 VNKMSKSLGNYIGVTEA---PADMFGKMLSISDVLMWRYYELLSSKSLEEIARLKHDVEE 286

Query: 292 -GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                  AK++IA EI T  HG +EA KA          +          I        +
Sbjct: 287 GEIHPKHAKEMIAMEIVTRYHGADEALKAQETFNRVHAQNEIPHD-----IELFTCKEPI 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +   +V  G   ST++ARR +K   +K+N   + +E+LQ++       G   L  GK+ 
Sbjct: 342 WIAKALVDCGLEESTSQARRDIKQGGVKLNQIKVEDEQLQLEC------GEYVLQVGKRK 395

Query: 411 HIICHL 416
                +
Sbjct: 396 FAKLKV 401


>gi|319785786|ref|YP_004145261.1| tyrosyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464298|gb|ADV26030.1| tyrosyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 420

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 160/410 (39%), Gaps = 23/410 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +        L +   +    G+D TA  LH GH   L  +   Q  GH+ I
Sbjct: 28  LIGRGADEILKRDELEARLKTGRPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQDLGHQVI 87

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R+ +  +++  N E         +     +    +  N  W
Sbjct: 88  FLIGDFTGMIGDPTGKSATRKPLTREDVLANAETYAEQVFKVLD----RERTEVRFNSEW 143

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++R  G   +V RML  +    R   +QS++  EF Y ++Q YD V L    
Sbjct: 144 FGQMSAADMIRLAGQH-TVARMLERDDFSKRFAAQQSIAIHEFLYPLVQGYDSVALK--- 199

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL       KM K+L   I + + 
Sbjct: 200 -ADVELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVNKMSKSLGNYIGIAEP 258

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEIT 307
                +       I D  +  + + L+    +   +  + +        + K  +A E+ 
Sbjct: 259 ---AIDIVNKTMKIGDELMWKWIELLSFEISTAEAKKLREEVAAGLNPRDIKLRLARELA 315

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  H    A  A             +  +P   ++    + G+ L  L+  AG   S +E
Sbjct: 316 TRFHDAAAAGTAIAGWHAAVTGQGDTSLLPLQDVAVP--AEGLRLAALLTAAGITPSNSE 373

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R LK  A+K++  ++ +         F       L  GK+N     L 
Sbjct: 374 ANRKLKERAVKVDGEVVEDASQV-----FAPGFEGVLQVGKRNFARVRLV 418


>gi|257784812|ref|YP_003180029.1| tyrosyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473319|gb|ACV51438.1| tyrosyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 403

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 104/401 (25%), Positives = 177/401 (44%), Gaps = 21/401 (5%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI     L     +G  +   +G D T+  LH GH   L  +   Q  GH    ++G GT
Sbjct: 17  QIVPLDGLKEKLKKGTPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGSGT 76

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  + ++++  N E         +          +++N  W+  +   
Sbjct: 77  ALIGDPSGRDSTRPPLTAEQVDANAETYVNQAMKILDP----ERTTVVHNGDWIKPMNL- 131

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           + +  + S F++ R+L  E   +R   +Q ++  EF Y +LQAYD V +       ++MG
Sbjct: 132 ETMLGLMSKFTIARILEREDFSNRYHNQQPIALHEFIYPVLQAYDSVVIK----ADVEMG 187

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL   +      ALT PLL  T    KM K+    I L      P + 
Sbjct: 188 GNDQIFNLLAGRDLMRDMDMEPQIALTMPLLVGTDGTKKMSKSYGNYIGLT---DEPNDM 244

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGRE 314
           +    +I D  +  + +  +TL + E+D + K       +  + K+ +   I  + HG  
Sbjct: 245 FGKVMSITDEIIPMYYRLCSTLSIDELDAIDKSFEDGTADPYQLKRALGRNIVDLYHGEG 304

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLK 373
           E  KA  +    F  +     +   +I+ +    G + L  ++V+AG A+S  EARR + 
Sbjct: 305 EGLKAQASFDAQFKNNEVPDDVKEFAITLEADEDGLIYLPKILVEAGIASSNGEARRLID 364

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              IKIN   I+ +  +++    +      L  GKK     
Sbjct: 365 GCGIKINQKPIAAKTYKVEPSVLEG---ALLQAGKKRWAKL 402


>gi|262374733|ref|ZP_06068005.1| tyrosyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310389|gb|EEY91481.1| tyrosyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 410

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 175/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLRVKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  +++  N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSKEQVLANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  + +      N  
Sbjct: 238 KSLGNYIGVF---DTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKVLLEEMAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E AE A  +A          +  P ++IS+ E    + + T++
Sbjct: 295 EIKRILALELVERFHDAEAAENAHKSAGNRITEGEVPEDTPEVTISRAEFGGELFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ +++ +    +K       G   +  GKK      
Sbjct: 355 RVAGLNPNAASAKDAVGRGAVKVDWNVV-DMSFSVKE-----NGTYIIQSGKKAIARVT 407


>gi|297565391|ref|YP_003684363.1| tyrosyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849840|gb|ADH62855.1| tyrosyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 447

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 93/462 (20%), Positives = 176/462 (38%), Gaps = 60/462 (12%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + L  L   G +  I + + L+ L S   +T  +G D T   +H GH   L 
Sbjct: 1   MSSVLSPTEALKRLEA-GSVEIIPHEKLLEKLSSGKKLTVKLGLDPTRPDIHIGHAVVLR 59

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            +   Q+ GHK + ++G  T++IGDPS R  +R  +  +E + N +         +    
Sbjct: 60  KMRQFQELGHKVVIIIGDFTAMIGDPSGRSATRPPLTLEETRANAKSYVEQVGKILITE- 118

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            +    +  N  WL ++ + ++++ + S  +V +ML  E  ++R  +   +S  EF Y  
Sbjct: 119 DQERFELRYNSEWLENLNFKEVIK-LASQLTVAQMLEREDFKNRYTQGIPISIHEFLYPF 177

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
            Q YD V +       ++MGG+DQ  N++ G ++       +  A   PLL    G KM 
Sbjct: 178 AQGYDSVPIR----ADVEMGGTDQKFNLLVGREVQRAYGLEEQVAFIMPLLEGPDGRKMS 233

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL------QG 292
           K+    I + +    P   ++    + D  +  + +  T L   EI ++ +         
Sbjct: 234 KSYDNYIGITE---EPAEIYRKLMKVGDDLLPKYLELCTDLTPQEIQQVLEKGGPVGAHR 290

Query: 293 KEIN-----EAKKIIATEITTMVHGREEAE------------------------------ 317
                     A   I   +   ++                                    
Sbjct: 291 VLARLVAGSYALPRIPARLDRELYEEMGYRLEAAGRDSETQAVLIVVAPLTGYSLNVSET 350

Query: 318 -KAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSN 375
            + A               + T+ I+  E+  G +G+  L   +G   S  EA+R +++ 
Sbjct: 351 VRQAEERYNEVAKGGIPDDIRTVPITSSELQEGRIGVAKLFTLSGLTESNGEAKRMIQNR 410

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ++I+  +I++  +Q+ L          L  GK   +   L 
Sbjct: 411 GLRIDGEVITDPNMQVSL-----DKPRVLQRGKDKFVRVQLA 447


>gi|325282260|ref|YP_004254801.1| Tyrosyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314069|gb|ADY25184.1| Tyrosyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 414

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 94/427 (22%), Positives = 171/427 (40%), Gaps = 27/427 (6%)

Query: 1   MPAFKSDF-----LSILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHA 51
           M   + +      LSIL  RG +  +S       L     +   +   +G D T   LH 
Sbjct: 1   MTEIRPNLPVDEQLSILK-RGVVDLVSEEDLRQKLSRSLETGQPLRVKLGADPTRPDLHL 59

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
           GH   L  +   Q  GHK I L+G  T+ IGDP+ + ++R  +  +E + N +       
Sbjct: 60  GHAVILRKMRQFQDLGHKVIMLIGDFTATIGDPTGKSKTRPPLTIEEARANAQSYLEQCR 119

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
             ++      +    +N  WL  + Y D++     + +V R+L  +    RL     +S 
Sbjct: 120 LILRSEPEVLEI--RSNGEWLEQLGYKDIIGLTAKY-TVARILERDDFSKRLSAGTPISM 176

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            E  Y + Q YD V L    +  +++GG+DQ  N + G  L           +T PLL  
Sbjct: 177 HELLYPLTQGYDSVAL----EADVELGGTDQLFNNLVGRALQRDYGQEPQVVMTLPLLVG 232

Query: 232 -ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
                KM K+L   I ++     P+  +     + D  + ++   LT LP   ID +   
Sbjct: 233 LDGTEKMSKSLDNYIGIS---DEPHAIFAGLMKVPDPLLANYFTLLTDLPQERIDELVAG 289

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG- 349
                 EA +++A E+   +    + + A           I    +P + +   E++   
Sbjct: 290 HPV---EAHRVLAREVLVWLAPGADPDAAEERFRSVAKGGIP-DDLPEVVVDAAELNDEG 345

Query: 350 -MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            + +  L+V AG   S   AR+ +++  +K++    ++ +  ++ +     G + L  GK
Sbjct: 346 RVSMARLVVLAGLEPSNGAARKLIQNRGLKVSGEAYTDAQGWVEREQLCMEGGLILQKGK 405

Query: 409 KNHIICH 415
                  
Sbjct: 406 DKFKRLK 412


>gi|160871601|ref|ZP_02061733.1| tyrosyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120400|gb|EDP45738.1| tyrosyl-tRNA synthetase [Rickettsiella grylli]
          Length = 401

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 176/411 (42%), Gaps = 24/411 (5%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +RG    +        L     +    G+D TA  LH GH   +  L  LQ  GH+ 
Sbjct: 7   EIFQRGSTELLVIDELKSKLKENRPLRIKAGFDPTAPDLHLGHTVLINKLRQLQDLGHEI 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++G  T++IGDPS ++ +R  +   ++  N +  +  F   +          +  N T
Sbjct: 67  DIIIGDFTALIGDPSGKNVTRPPLSVDKVVANTKTYQQQFDKILDPK----KTNLRFNST 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   DL++   S+ +V RML  +    R  + +S++  EF Y +LQAYD V L   
Sbjct: 123 WLGKLSVTDLIKLASSY-TVARMLERDDFHQRYHQHRSIAIHEFLYPLLQAYDSVVLK-- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               L+ GG+DQ  N++ G +  +  K      LT P+L       KM K+L+  I +++
Sbjct: 180 --TDLECGGNDQKFNLLLGREFQKHFKQTPQIILTLPVLEGLDGVQKMSKSLNNYIAIDE 237

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTT----LPMSEIDRMAKLQGKEINEAKKIIATE 305
              S    +    +I D  +  + + L+       + ++ + A        + K  +A E
Sbjct: 238 ---SANTMFGKIMSISDELMWRYFELLSFKKTLNDIKKMQQDALEGKANPRDFKIELALE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H   EAEKA       F        + T+ IS       + +  L+ +AG  +ST
Sbjct: 295 IIERFHTPSEAEKALKEFQHQFREGAIPSEIKTLCISIS--GENLPIAHLLKRAGLVSST 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R + + A+KI++  I ++KL IK              GK+      +
Sbjct: 353 SEAFRFIDAGAVKIDSIKIDDKKLSIKT-----DTTHVYQVGKRRFAKVTI 398


>gi|218247683|ref|YP_002373054.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257060980|ref|YP_003138868.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218168161|gb|ACK66898.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256591146|gb|ACV02033.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 407

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 169/417 (40%), Gaps = 30/417 (7%)

Query: 10  SILSE--RGFIHQISN-------PRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLM 58
             L+   RG      +          L+ L  Q    +   +G D T S +H GH     
Sbjct: 8   ETLNWLYRGTHEIFPHQPDSNNREENLEQLLKQCDRPLRVKLGIDPTGSDIHLGHSIPFR 67

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH  + ++G  T+ IGDP+ + E R+ +  +++Q N +         + + T
Sbjct: 68  KLRMFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTPEQVQANAKNYLEQLHPILDFDT 127

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +  N  WL  +     ++E+ +  +V +ML+ E    R K+E  +   EF Y +
Sbjct: 128 P-GRLEIRYNSQWLSQLNL-AKIQELLATMTVGQMLAKEGFAERFKQENPIFLHEFLYPL 185

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKM 237
           +Q YD V +    D  +++GG+DQ  NI  G DL         F L  P+L  T    KM
Sbjct: 186 MQGYDSVMI----DADVELGGTDQKFNIAVGRDLQRHFGKKPQFGLLLPILIGTDGSQKM 241

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
            K+L+  + L +   S Y+         DA +  + + LT   +  +            +
Sbjct: 242 SKSLNNYVGLKEGPLSMYS---KLEKTPDALIKEYFELLTNFSLDTLPE-------NPRD 291

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            +K +A EI +  HG++ A  A   A E     I +           +V     L  ++ 
Sbjct: 292 CQKQLAVEIVSQFHGKDAALLAQKTAEELVTQGIGTSTDAVPEYELSQVEFPAKLFYILS 351

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +G   S+ + RR L+  A++I+ + +++  L     +        L  GKK  I  
Sbjct: 352 ASGLCESSGDGRRQLQGGAVRIDGTRVTDPNLIFNTPEELYGK--VLQVGKKKFIRL 406


>gi|50365404|ref|YP_053829.1| tyrosyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81391721|sp|Q6F0M8|SYY_MESFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50363960|gb|AAT75945.1| tyrosyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 413

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 136/404 (33%), Positives = 205/404 (50%), Gaps = 19/404 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG + QI+N   L    + G    Y G+D TA SLH GHL  ++ L    K 
Sbjct: 2   NIIKELEWRGLVKQITNEERLLKAQNDGA-AVYCGFDPTADSLHVGHLMMIVTLKRFDKA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G + I L+GGGT +IGDPSF+ + R++   ++++ +   I+      I       D    
Sbjct: 61  GFQAIGLIGGGTGMIGDPSFKADERKLQTDEQVKFHATAIQNQLLRIIP------DVTFA 114

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  ID LR++G  F+++ +L+ +S+ +R+     LS  EF+Y +LQAYDF  
Sbjct: 115 NNVDWLGNMSLIDFLRDVGKDFNISYLLNKDSIATRI--STGLSVTEFSYTMLQAYDFYN 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L  N++C++Q+GGSDQWGNI  G D           +    T PLLT + G K GKT SG
Sbjct: 173 LYINHNCKVQIGGSDQWGNITSGTDYISTRVGSANTEAAGFTIPLLTKSDGQKFGKTESG 232

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
           A+WL+   TS Y+F+Q+W N DD D V   K LT L   EID +         +   +K 
Sbjct: 233 AVWLDSNKTSVYDFYQFWINQDDNDCVKMLKYLTFLTKEEIDELEAKHKEAPHLRTMQKT 292

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTLI 356
           +A+EIT  VHG +E  KA       F  +I +     +     SI   ++ +    +  I
Sbjct: 293 LASEITKFVHGDKELNKAIKLTDAFFTGNILNLDDDLLELAIKSIPTIQLEKTTSAIDAI 352

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           V    A+S  EAR  + + AI  N+  + +E + +         
Sbjct: 353 VNVNAASSKREAREFINAKAISFNDVAVQDENMLLSEIKTIKNN 396


>gi|281201032|gb|EFA75246.1| tyrosine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 480

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 127/439 (28%), Positives = 209/439 (47%), Gaps = 35/439 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RGFI+Q++N  E  +  +   ++ Y G+D TA SLH G+L  LM+L   ++ 
Sbjct: 45  NVIKTLRSRGFIYQMTNNDEEMVKITNTSISLYAGFDPTADSLHIGNLLTLMVLLHFKRH 104

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T++IGDPS +   R  +    ++ N   I       +       D  ++
Sbjct: 105 GHKPVALLGGATALIGDPSGKSTDRPQLDRSYVENNSSYINENIVDIL-----GKDTTIV 159

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR---------------LKREQSLSF 171
           NN  W  SI  ID  R++G +F V  ML  + V +R                     +S 
Sbjct: 160 NNIDWNKSISIIDFFRDVGRYFRVGNMLRKDFVHNRLGTLSENGKQLSLNDDDSASGISL 219

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF Y + QA DFV L + + C +Q+GGSDQWGNI  G +L ++  +   + +T PLLT 
Sbjct: 220 PEFCYSLFQANDFVHLNQTHQCVIQVGGSDQWGNITDGCELIKKKLSKPAYGITIPLLTN 279

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAK 289
           + G K+GK+   +IWL+ + TS YNF+QYW  + D DV    K  T LP+ EI     A 
Sbjct: 280 SQGKKLGKSEGNSIWLSSKKTSAYNFYQYWIQVSDQDVEKLLKLFTLLPLEEIQSIVDAH 339

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
            +   +   +K IA  +T +VHG    E A       F  +  +    + S     +  G
Sbjct: 340 NKEPHLRLGQKKIAECVTQLVHGDRGLEDAIKTTNLLFGDNKLNLQDHSESKEIGRLLSG 399

Query: 350 MGLLTLIVKAGFAT-------------STNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           + + T + K+ + +             S N+++  + + ++ +N   + +    ++ +  
Sbjct: 400 VNISTSLSKSEYLSTPISSIFSKVSGLSKNQSKLLINNQSLYLNGEQVKSPAQLLEPECL 459

Query: 397 DSTGNIKLSFGKKNHIICH 415
                + L  GKK   +  
Sbjct: 460 IDNSFVILRSGKKAFHLIK 478


>gi|328949986|ref|YP_004367321.1| Tyrosyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450310|gb|AEB11211.1| Tyrosyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 435

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/443 (20%), Positives = 176/443 (39%), Gaps = 51/443 (11%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG           + L S   +   +G D T   LH GH   L  +   Q+ GH
Sbjct: 7   LTELK-RGAAEITPEEELREKLASGRKLIIKLGADPTRPDLHLGHAVVLRKMRQFQELGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K + ++G  T +IGDPS R+++R  +  +E + N +         ++         +  N
Sbjct: 66  KIVLIIGDFTGMIGDPSGRNKTRPPLTLEETRTNAQTYVAQVGKILRQEPDV--FELRYN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +++ ++++ + S  +V +ML  E  ++R      +S  EF Y + QAYD V + 
Sbjct: 124 SEWLGQLRFQEVIK-LASQITVAQMLEREDFKARYTAGTPISLHEFLYPLAQAYDSVAIQ 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 ++MGG+DQ  N++ G ++       +  A   P+L       KM K+L   I +
Sbjct: 183 ----ADVEMGGTDQKFNLLVGREIQRAYGQEEQVAFLMPILPGLDGKEKMSKSLDNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA-- 303
           N++ TS +   +    + D  +  +   LT L  +E+ +               +++   
Sbjct: 239 NEDPTSMF---KKLMRVPDHVLHEYFTLLTDLEAAEVQQLLETGGMVGAHRVLARLVTGA 295

Query: 304 --------------TEITTMVHGREEAEKAATAAMECF---------------DMSIHSQ 334
                          E           + A  A+                         +
Sbjct: 296 YVLERIPARMDRAFYEALGYDLEAAGRDPAPKASQYPEVSERLAHAEARYDAVAKGGIPE 355

Query: 335 HMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +P + ++ +E+  G + +  L   AG   S  EARR +++  ++++ +++++   Q+ L
Sbjct: 356 DIPLVEVAPEELKDGAIWVCRLFTLAGLTRSNGEARRLIQNRGLRVDGAVVTDPNQQLTL 415

Query: 394 QDFDSTGNIKLSFGKKNHIICHL 416
           +       + L  GK   +   L
Sbjct: 416 E-----RPLVLQRGKDRFVRVQL 433


>gi|307546701|ref|YP_003899180.1| tyrosyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218725|emb|CBV43995.1| tyrosyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 399

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 94/408 (23%), Positives = 176/408 (43%), Gaps = 22/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +        L S   +    G+D TA  LH GH   L  +   Q  GH+ I
Sbjct: 10  LLKRGTHEILLEEELEKKLASGRTLRIKAGFDPTAPDLHLGHSVLLTKMRQFQDLGHEVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T  IGDP+ ++ +R+ +  +E++ N E  K      +          +  N  W
Sbjct: 70  FLIGDFTGRIGDPTGKNVTRKPLTEEEVRANAETYKEQVFKVLDPA----KTEVRFNAEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S+   D++  + +  +V RML  +    R +  QS+S  EF Y ++Q YD V L    
Sbjct: 126 FSSMSAADMIE-LAAQSTVARMLERDDFEKRYRAGQSISIHEFLYPLVQGYDSVAL---- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G ++ +         +T PLL       KM K+L   + +++ 
Sbjct: 181 EADIELGGTDQKFNLLMGREVQKHFDQESQVVITMPLLEGLDGVQKMSKSLGNYVGVDEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
              P   +    ++ D+ +  +   L+     EID  + +  QG    + K  +A E+  
Sbjct: 241 ---PGAMFNKLVSMPDSLMWRYFDLLSLKSNEEIDALKHSVEQGANPRDIKMELARELIG 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P + +   E S    +  ++ +AG   ++ +A
Sbjct: 298 RYHGEEAAANAHRSAGNQLADGELPEDLPEVDVD-FEGSDRAPIAAVLNRAGLVQNSAQA 356

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +  L +  +K++  +++ + +       D+     +  GKK +    L
Sbjct: 357 KDMLGNGRVKVDGEVVARDHM------LDTGKRYVIQAGKKRYARVTL 398


>gi|188586426|ref|YP_001917971.1| tyrosyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351113|gb|ACB85383.1| tyrosyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 412

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 107/416 (25%), Positives = 186/416 (44%), Gaps = 28/416 (6%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +   G    IS     + +     S   +   +G D +A  +H GH   L  L  +Q+ 
Sbjct: 13  EIFSHGTEEIISKEELQNKIQKSIDSNEPLRLKLGLDPSAPDIHLGHTVVLRKLKQIQEM 72

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH    ++G  T  IGDP+ R E+R+ M ++EI EN E  K      +          + 
Sbjct: 73  GHNVTIIIGDFTGKIGDPTGRSETRKQMTTEEILENAETYKEQIFKILYSD----KTDVR 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL ++K+ + + E+ S  +V RML  E    R K+ + +S  EF Y I+Q YD V 
Sbjct: 129 FNSEWLSNLKF-EDIIELSSKVTVARMLEREDFNWRYKKNRPISLHEFFYPIMQGYDSVF 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAI 245
           L    D  ++ G ++Q  N++ G  L +        AL  P+L  T    KM K+L   I
Sbjct: 188 L----DSDVEFGATEQKFNLLMGRQLQKEKGNTPQIALMLPILVGTDGEKKMSKSLGNYI 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
            + ++   PY+ +    +I D  ++ +    T L   E+D + K   +GK   + K  +A
Sbjct: 244 GIEEK---PYDMYGKTMSIPDELIIDYFTLTTDLLPEEVDEIEKALNEGKNPRDIKMKLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE----VSRGMGLLTLIVKA 359
            EI T+ HG+EEAEKA    ++ F      + +P  S+   +        + ++ L+   
Sbjct: 301 REIVTLYHGKEEAEKAEQEFLKVFQQRQLPEDIPEYSLETIKKDMTDEHKIPIVKLLQNC 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              +S +E RR +K  A+K+    ++++  ++++          +  GK+      
Sbjct: 361 ELVSSNSEGRRMVKQGAVKLEGEKVTDKNAEVEIS-----PGAIIQVGKRKFAKIT 411


>gi|312128010|ref|YP_003992884.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778029|gb|ADQ07515.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 396

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 103/408 (25%), Positives = 185/408 (45%), Gaps = 28/408 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ++G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I +
Sbjct: 11  KKGAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILI 70

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +          + +N  WL 
Sbjct: 71  IGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQVLKILDPQ----KTTIRHNSEWLE 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q YD V +    + 
Sbjct: 127 PMNFLDVI-NLASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EA 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            +++G ++Q  NI+ G  L +       ++  L   L+ T    KM K+L   I +N+  
Sbjct: 182 DVELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINEP- 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++S+ +  T L   EI+ + +   +      +AK  +A EI  
Sbjct: 241 --PNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A KA    +  F        +P + ++  +V     L   +V+    +ST+E 
Sbjct: 299 LYHGEEAALKAEEEFIRVFQKKDVPDDIPEVELANVKVY----LPRFMVENKLCSSTSEG 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R +KS  +K+N   +S   ++ K  D        L  GK   +   L
Sbjct: 355 MRLIKSGGVKLNGQKVSELDIEFKDGD-------VLQVGKLKFVKIKL 395


>gi|110833227|ref|YP_692086.1| tyrosine-tRNA ligase [Alcanivorax borkumensis SK2]
 gi|110646338|emb|CAL15814.1| tyrosine-tRNA ligase [Alcanivorax borkumensis SK2]
          Length = 399

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 170/408 (41%), Gaps = 22/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I        L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LITRGADEIIQQEELRKKLALGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQELGHEVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +  +++  N +  K      +     ++   +  N +W
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLSREDVLRNADTYKEQVFKILD----ESKTRVEFNSSW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           + +I     + ++   ++V RML  +    R K  Q ++  EF Y ++Q YD V L    
Sbjct: 126 MNTIGA-AGMIKLAGQYTVARMLERDDFDKRYKGNQPIAIHEFLYPLVQGYDSVAL---- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G  L +         LT P+L       KM K+L   + +N  
Sbjct: 181 EADVELGGTDQKFNLLMGRTLQKTYGQSPQICLTMPILEGLDGVQKMSKSLGNYVGVN-- 238

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   ++   ++ D+    + + L+      I+  +   +      EAKK  A E+  
Sbjct: 239 -DAPGEMYRKLLSLPDSLTWRYYELLSACSNERIEALKAEAVALGSPQEAKKAFALEMVE 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A+ A  +A     +     ++P + +   E    + +L L+ +AG   +   A
Sbjct: 298 RFHGVEAAQAAPKSAGNQIALGHIPDNVPEVEVDIGE-QESIHILPLLREAGLVQNGKAA 356

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +      A+ ++ + ++ E        F    +  +  GKK      +
Sbjct: 357 KDVFGRGAVYLDGAQLNEE------ASFSRGDSHVIQAGKKKIARVTI 398


>gi|237752626|ref|ZP_04583106.1| tyrosyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376115|gb|EEO26206.1| tyrosyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 404

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 101/421 (23%), Positives = 176/421 (41%), Gaps = 35/421 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
            + L+ + ERG + +I     +  L +         T   G+D TA  LH GH   L  L
Sbjct: 8   KEALAEI-ERG-VQEIIGFDYIKELVTNYFKEGKTYTIKAGFDPTAPDLHLGHTVLLQKL 65

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK G K   L+G  T +IGDPS + E+R+ +  +++ +N +  +      +      
Sbjct: 66  ATFQKYGAKVFFLIGDFTGMIGDPSGKSETRKPLSKEQVLQNAKTYEEQVYKVLD----A 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   ++ N  WL S+    ++  + + FSV RML  +    R K +  +S +EF Y +LQ
Sbjct: 122 SKMEIVFNSNWLDSLGTRGMIE-LAAKFSVARMLERDDFEKRFKAQSPISIVEFFYPLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMG 238
            YD V L    +C ++ GG+DQ  N++ G  L        +   +  PLL       KM 
Sbjct: 181 GYDSVAL----NCDIEFGGTDQKFNLLMGRHLQRAYGLEKEQSVVMVPLLEGLDGVNKMS 236

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EI 295
           K+L   + + +    P   +    +I D+ +  + + L+T  + EI  + +   K     
Sbjct: 237 KSLGNYVGITQ---EPKEMFGRILSISDSLMWRYYELLSTKSLQEIAELKQGVEKGELHP 293

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
              K+ +A EI    +    A  A       F        +P  +       +G+ +  L
Sbjct: 294 KVVKENLALEIIARYYDINAANAAKEEFARVFSKDELPSDIPVFT-----KEKGIWIAQL 348

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S +EA R +K  A+K+N   + + KL ++           L  GK+      
Sbjct: 349 AQECGLCDSNSEALRAIKQGALKLNGKKVEDSKLNLQES------EYILQIGKRKFAKVI 402

Query: 416 L 416
           +
Sbjct: 403 I 403


>gi|294338521|emb|CAZ86850.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) (TyrRZ)
           [Thiomonas sp. 3As]
          Length = 411

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 170/412 (41%), Gaps = 28/412 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +     +  L     +   +   +G D TA  +H GH   L  L  LQ  G
Sbjct: 20  ITKRGCAELLVEADWIAKLTRSHQTGQPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLG 79

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 80  HTVIFLIGDFTSRIGDPSGRNATRPPLTIEQIKTNAQTYYAQASLVLDPQ----KTEIRY 135

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W       D +  + + +++ R+L  +    R K    ++  E  Y ++Q +D V L
Sbjct: 136 NSEW-SEPLGADGMIRLAAKYTLARLLERDDFTKRFKEGVPIAMHELLYPLMQGFDSVAL 194

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L           LT PLL       KM K+    I 
Sbjct: 195 K----SDLELGGTDQKFNLLVGRELQREYGQEPQCILTMPLLEGLDGVEKMSKSKGNYIG 250

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           + +    P   +    +I D  +  + + L+  PMSEI   +     G+   +AK ++A 
Sbjct: 251 IQEA---PATMFAKLLSISDVLMWRYYELLSFRPMSEIAALKAEVEAGRNPKDAKVMLAR 307

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+ T  H    A+ A           I    +P + ++  E   G+ L   + +AG   S
Sbjct: 308 ELVTRFHSASAADAAEADFALRASGGIP-DDIPEVRLALPE--GGLALPQALKQAGLVPS 364

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T E  R ++   ++I+ ++  +  L++        G + L  GK+      L
Sbjct: 365 TAEGVRMIEQRGVRIDGTVAEDRTLKLGA------GTVVLQVGKRKFARVTL 410


>gi|296114084|ref|YP_003628022.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921778|gb|ADG62129.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326560668|gb|EGE11036.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326562349|gb|EGE12675.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326563125|gb|EGE13398.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326567854|gb|EGE17956.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326569065|gb|EGE19134.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326571757|gb|EGE21770.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326573593|gb|EGE23554.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis O35E]
 gi|326574328|gb|EGE24271.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326575552|gb|EGE25477.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 406

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 100/418 (23%), Positives = 179/418 (42%), Gaps = 27/418 (6%)

Query: 5   KSDFLSI-----LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            SDFL I     L  RG     S    +  L     +   +G D TA+ LH GH   L  
Sbjct: 1   MSDFLPIKDQLTLIMRGVQEIYSKEDLIKKLEKNRPLRIKLGMDPTAADLHLGHTVVLNK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+ + L+G  T+ IGDPS R+ +R  +   E++ N +         +     
Sbjct: 61  LRHFQDLGHEVLFLIGDYTARIGDPSGRNATRPPLTEAEVKANAQTYAKQVFKILDKD-- 118

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++ N  W   +     + ++ S  +V+RML  +    R   +  ++  EF Y ++
Sbjct: 119 --KTKIVFNSDWFGKMSA-GDMIQLASQITVSRMLERDDFSKRYNSQTPIAIHEFLYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    D  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 176 QGYDSIAL----DADVELGGTDQTFNLLMGRTLQGRYDKEPQVCITMPILEGLDGVQKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +N      Y   Q   ++ D  +  + + L+  PMSE++ +        N  
Sbjct: 232 KSLGNYIGINDPAGVMY---QKILSMPDTLIARYFELLSFKPMSEVNALLDDMKNGRNPQ 288

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H +E A+ A  +A            +P +S+S +     + +  ++
Sbjct: 289 EIKRILALELIERFHDKESADNAHKSAGNRLADGELPVDLPEVSLSLN-GQDKLFITQVL 347

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +AG A ++ +A+  L   A+K++  ++ +    ++         + +  GKK +   
Sbjct: 348 NQAGLAKNSAQAKDMLSRGAVKVDGQVV-DGSFALE-----QGQTVVIQAGKKAYARV 399


>gi|296134576|ref|YP_003641818.1| tyrosyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295794698|gb|ADG29488.1| tyrosyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 411

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 170/412 (41%), Gaps = 28/412 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG    +     +  L     +   +   +G D TA  +H GH   L  L  LQ  G
Sbjct: 20  ITKRGCAELLVEADWIAKLTRSHQTGQPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLG 79

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +          +  
Sbjct: 80  HTVIFLIGDFTSRIGDPSGRNATRPPLTIEQIKTNAQTYYAQASLVLDPQ----KTEIRY 135

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W       D +  + + +++ R+L  +    R K    ++  E  Y ++Q +D V L
Sbjct: 136 NSEW-SEPLGADGMIRLAAKYTLARLLERDDFTKRFKEGVPIAMHELLYPLMQGFDSVAL 194

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  L++GG+DQ  N++ G +L           LT PLL       KM K+    I 
Sbjct: 195 K----SDLELGGTDQKFNLLVGRELQREYGQEPQCILTMPLLEGLDGVEKMSKSKGNYIG 250

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           + +    P   +    +I D  +  + + L+  PMSEI   +     G+   +AK ++A 
Sbjct: 251 IQEA---PATMFAKLLSISDVLMWRYFELLSFRPMSEIAALKAEVEAGRNPKDAKVMLAR 307

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+ T  H    A+ A           I    +P + ++  E   G+ L   + +AG   S
Sbjct: 308 ELVTRFHSASAADAAEADFALRASGGIP-DDIPEVRLALPE--GGLALPQALKQAGLVPS 364

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T E  R ++   ++I+ ++  +  L++        G + L  GK+      L
Sbjct: 365 TAEGVRMIEQRGVRIDGTVAEDRTLKLGA------GTVVLQVGKRKFARVTL 410


>gi|164660650|ref|XP_001731448.1| hypothetical protein MGL_1631 [Malassezia globosa CBS 7966]
 gi|159105348|gb|EDP44234.1| hypothetical protein MGL_1631 [Malassezia globosa CBS 7966]
          Length = 499

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 136/491 (27%), Positives = 220/491 (44%), Gaps = 77/491 (15%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-----------VVTAYIGYDLTASSL 49
           +  F+S  + +L  RG + Q +  R L    +               T Y G D +A SL
Sbjct: 8   ITTFRS-VVDVLESRGMV-QATTSRALKEHLAMPGEASSTPHQHIKRTIYSGVDPSAPSL 65

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H G+L  L+ L      GHK + L+GG T  IGDPS R   R  + + ++  N+  I+  
Sbjct: 66  HVGNLLPLVALLHCAIYGHKALVLIGGATGAIGDPSGRSSERSALGTDQLTSNVTTIRAQ 125

Query: 110 FSSFIKYGTGKT-------------------------------DALMLNNETWLCSIKYI 138
              F                                       D  ++NN  W   IK +
Sbjct: 126 IFQFFHNAAAYLSRRNILHAEPVLFGSCNQQSWENECLFQTALDIQLVNNLDWFRDIKML 185

Query: 139 DLLREIGSFFSVNRMLSFESVRSRL------KREQSLSFLEFNYMILQAYDFVELAKNYD 192
           D L  +G +  VN M++ +SV+SRL           LSF EF+Y ++QAYD+  L +   
Sbjct: 186 DFLSSVGRYVRVNDMMARDSVKSRLFPSEGGPATTGLSFTEFSYQLMQAYDYCYLHERMG 245

Query: 193 CRLQMGGSDQWGNIICGIDLGER---------------LKTPKLFALTSPLLTTASGTKM 237
           C +Q+GGSDQ GNI+ GIDL  R               ++    + LT PLL T+SG K 
Sbjct: 246 CSVQLGGSDQMGNIMAGIDLIRRQRAAHVQNDKMSDLSMRADPAYGLTLPLLMTSSGVKF 305

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+W++  + S  +F+QY+    DADV  +   LT +P+ EI ++  L  ++   
Sbjct: 306 GKSAGNAVWISPALLSDLDFYQYFVRSADADVERYLTSLTFMPLEEIKQVMILHSQDRSK 365

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI--------SISKDEVS 347
             A+  +A E+T +V G +   +A  A    FD  +++  +  I         + +   +
Sbjct: 366 RVAQICLANEMTELVRGPDALRRAQLATKVLFDTDVNALTLEQILYAFEGDPRLVRLTET 425

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSN--AIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + M LL L  + G  +S +EARR ++     + +NN  + + + +++ +   +     + 
Sbjct: 426 QTMDLLRLAAEIGLVSSRSEARRLVQQGSSGLYVNNVPVKDVQAKLEPEHLLNGQFFVMR 485

Query: 406 FGKKNHIICHL 416
            GK NH I  L
Sbjct: 486 AGKSNHKIVVL 496


>gi|297172406|gb|ADI23380.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_28K04]
          Length = 404

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 186/423 (43%), Gaps = 25/423 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +     L I  +RG    +           +  +   +G+D TA  LH GH   +  +
Sbjct: 1   MISKDKQLLEI--QRGTEEILVEEEFTKRFHQKKPLKIKVGFDPTAPDLHLGHTIIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I EN    +      +      
Sbjct: 59  RQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTREQIDENAATYEKQIFKILDKDL-- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +    L+  I S ++V RML  +  ++R K    +S  E  Y ++Q
Sbjct: 117 --TRIEFNSSWMQQVNSSKLIE-IASKYTVARMLERDDFKNRFKTGNPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
           AYD V L    +  +++GG+DQ  N++ G  L +    P   A+T PLL       KM K
Sbjct: 174 AYDSVAL----EVDVELGGTDQKFNLLVGRHLQQLYGQPPQTAITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T +  I L     SP +      +I D  +  + K L+   + EI   +    +GK   +
Sbjct: 230 TANNYIALT---DSPKDMLGKIMSISDELMWRYFKLLSARSLDEIGLLQKQVKKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT--- 354
            K ++A EI    H ++ ++ A  + +  F      + + ++SI+  EV    G++    
Sbjct: 287 IKFLLAEEIVERFHDKQSSDDAKASFLRQFQQGQMPEEIKSVSINYSEVESEPGIVNMAK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A   TS +E  R +K+ ++++    I   +LQ      D+     LSFGK +    
Sbjct: 347 VLYLANLVTSVSEGHRAIKAGSVRLEGEKIERSQLQ-----MDANSRHILSFGKHHFAKV 401

Query: 415 HLC 417
              
Sbjct: 402 EFI 404


>gi|332295722|ref|YP_004437645.1| Tyrosyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178825|gb|AEE14514.1| Tyrosyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 393

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 108/404 (26%), Positives = 180/404 (44%), Gaps = 21/404 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I        + S   +   +G D TA  LH GH   L  L   Q  GH  I
Sbjct: 9   LITRGTEEIIPLEDLEKKIKSGRKLNIKLGIDPTAPDLHLGHTVVLRKLKNFQDLGHNVI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDP+ + ++R  + + EI++N +  K      +     +   ++  N  W
Sbjct: 69  LIIGDFTTLIGDPTGKSKTRPALSADEIKKNAQTYKTQAFKILD----EKKTIIKYNSEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I   + L +I + F+V R+L  E+   RLK  +++S  E  Y +LQAYD V +    
Sbjct: 125 LSKISL-EELIKISAKFTVARILERETFSQRLKTNEAISLHEILYPLLQAYDSVAIK--- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL E++       LT P++       KM K+L   + + ++
Sbjct: 181 -ADVELGGTDQTFNLLIGRDLMEKMGMEPQVCLTMPIIAGLDGKQKMSKSLGNYVGIAED 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P + +    +I D  +  +   LT     EI    +       + KKI+A EIT M 
Sbjct: 240 ---PKDIFGKLMSIPDELLRQYFILLTDFKEDEISGFFERYKNP-KDIKKILAFEITKMY 295

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
              EEA KA  +    F+     +  P       E    + L  L+V  G   S++E +R
Sbjct: 296 SSEEEALKAKESFETAFEKRTFPKDAPVYKWPY-ENENEVWLPKLLVDLGLLKSSSEGKR 354

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +   AI+++   +++EK  +K  D        L  G+K  +  
Sbjct: 355 LISQGAIEVDEETVTDEKFVVKKGDHR------LKVGRKMFLRI 392


>gi|326561712|gb|EGE12047.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 406

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 99/418 (23%), Positives = 179/418 (42%), Gaps = 27/418 (6%)

Query: 5   KSDFLSI-----LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            SDFL I     L  RG     S    +  L     +   +G D TA+ LH GH   L  
Sbjct: 1   MSDFLPIKDQLTLIMRGVQEIYSKEDLIKKLEKNRPLRIKLGMDPTAADLHLGHTVVLNK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+ + L+G  T+ IGDPS ++ +R  +   E++ N +         +     
Sbjct: 61  LRHFQDLGHEVLFLIGDYTARIGDPSGKNATRPPLTEAEVKANAQTYAKQVFKILDKD-- 118

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++ N  W   +     + ++ S  +V+RML  +    R   +  ++  EF Y ++
Sbjct: 119 --KTKIVFNSDWFGKMSA-GDMIQLASQVTVSRMLERDDFAKRYGNQTPIAIHEFLYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    D  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 176 QGYDSIAL----DADVELGGTDQTFNLLMGRTLQGRYDKEPQVCITMPILEGLDGVQKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +N      Y   Q   ++ D  +  + + L+  PMSE++ +        N  
Sbjct: 232 KSLGNYIGINDPAGVMY---QKILSMPDTLIARYFELLSFKPMSEVNALLDDMKNGRNPQ 288

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H +E A+ A  +A            +P +S+S +     + +  ++
Sbjct: 289 EIKRILALELIERFHDKESADNAHKSAGNRLADGELPVDLPEVSLSLN-GQDKLFITQVL 347

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +AG A ++ +A+  L   A+K++  ++ +    ++         + +  GKK +   
Sbjct: 348 NQAGLAKNSAQAKDMLSRGAVKVDGQVV-DGSFALE-----QGQTVVIQAGKKAYARV 399


>gi|189485312|ref|YP_001956253.1| tyrosyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287271|dbj|BAG13792.1| tyrosyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 388

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 108/412 (26%), Positives = 175/412 (42%), Gaps = 31/412 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            ++ L  +  RG    IS       L S   +   +G D T S LH GH   +  L   Q
Sbjct: 1   MNEALEKIK-RGTNEIISFEELKKKLASGKKLRIKLGIDPTTSDLHLGHTVIINKLKTFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ + L+G  T+ IGDPS R E R +M  ++I+ N           +          
Sbjct: 60  DLGHQIVFLIGDFTARIGDPSGRSEMRPVMTDEQIKNNARTYADQIFKILNRD----KTE 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++ N  WL  +     L  + +  +V +ML  +  + R K +  LS +EF Y +LQAYD 
Sbjct: 116 IVYNSKWLSELGV-KGLLNLAAKSTVAQMLVRDDFKKRYKEDSPLSIVEFLYPLLQAYDS 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLT-TASGTKMGKTLS 242
           V L    +  +++GGSDQ  N++ G ++            +T PLL  T    KM K+  
Sbjct: 175 VVL----NADVELGGSDQKFNLLLGREIQRDYGIKDVQVVITMPLLEGTDGTKKMSKSYK 230

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
             I LN    SP + +    +I D  +  + + LT + ++ +            EAK  +
Sbjct: 231 NCIALN---DSPEDMFGKIMSISDELMCRYHELLTQIDLNVVK------NMHPKEAKSAL 281

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+    +G+EEA KA     + F        +    I  +E+     L  L+VK+G  
Sbjct: 282 AKELVERYYGKEEALKAEEEFDKIFSKKNIPNDIGEYRIKDEEIK----LSDLLVKSGMI 337

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +S NEARR ++   ++I++         ++     S     L  GK+     
Sbjct: 338 SSRNEARRIIEQGGVRIDSRK------TVRDFVVKSGNTFVLQVGKRKFNRI 383


>gi|86609945|ref|YP_478707.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|115305824|sp|Q2JIV0|SYY_SYNJB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|86558487|gb|ABD03444.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 413

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 99/417 (23%), Positives = 179/417 (42%), Gaps = 22/417 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRE-LDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLM 58
           PA++   ++ + ERG           L    +Q    +   +G D T   LH GH   L 
Sbjct: 10  PAYRDPLIAQIVERGVAEIFPGGAAALAERLAQADRPLRVKLGIDPTRPDLHLGHSVVLR 69

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH  I L+G  T+++GDP+ + E+R  +   E++EN           + + T
Sbjct: 70  KLRQFQDAGHVAILLIGDFTALVGDPTGQSEARPRLTPAEVEENARTYLEQAGKILDFET 129

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                +  N   WL  +   +L+  + +  +V +ML+ E    R +    +   EF Y +
Sbjct: 130 PGRLEVRRN-SEWLAHLTLSELIE-LQAQMTVGQMLAKEDFAQRYQAGTPVYLHEFLYPL 187

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKM 237
           LQ YD V LA      +++GG+DQ  N++ G DL         F LT PLL    G  KM
Sbjct: 188 LQGYDSVALA----ADVELGGTDQRFNLLTGRDLQIWKGQAPQFCLTVPLLEGLDGYQKM 243

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
            K+ +  + L ++  + Y+       + D  V  + + LT++P++E+        ++  +
Sbjct: 244 SKSKNNYVGLTEDPLTMYS---KLEKVPDHLVERYFELLTSVPLAEL-------PQDPRQ 293

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            + ++A  +    H    AE+A   A       I ++     + + D +S  + L  ++ 
Sbjct: 294 RQILLAKTLVAQFHSPAAAEEAQRTAQALVLDGILAETGSIPTFAIDGLSYPVKLSYILR 353

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + G   S  EARR ++  A++++   + +  L+       +     L  GKK     
Sbjct: 354 ECGLCKSAAEARRQIQGGAVRLDGQKVEDPDLEFAHASELAGR--ILQVGKKAFRRL 408


>gi|157736895|ref|YP_001489578.1| tyrosyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698749|gb|ABV66909.1| tyrosyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 402

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 96/423 (22%), Positives = 181/423 (42%), Gaps = 29/423 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLT 55
           M     + L+ +  RG + +I +   ++ L               G+D TA  +H GH  
Sbjct: 1   MDNRVLEALNEIK-RG-VAEIIDFEAIEKLIKRYFETGENFYVKAGFDPTAPDIHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L   QK G     L+G  T+ IGDP+ + E+R+++  +++  N E  K      + 
Sbjct: 59  LIQKLALFQKFGGIVQFLIGDFTATIGDPTGKSETRKVLSREQVLNNAETYKQQVFKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    ++ N +WL  +     L  + S  +V RML  +    R      ++  EF 
Sbjct: 119 ----ENKTQVVFNSSWLNELGT-AGLIALASNLTVARMLERDDFSKRYSSNTPIAVSEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL-TSPLLTT-AS 233
           Y +LQ YD + L    +  +++GG+DQ  N++ G  L +   + K  A+   P+L     
Sbjct: 174 YPLLQGYDSIAL----NSDVELGGTDQKFNLLMGRTLQKAYNSKKQQAVLMMPILEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   I +      P++ +    +I D  +  + + L++  + EI+ +      
Sbjct: 230 VQKMSKSLGNYIGVT---DEPFDMFGKILSISDELMWRYYELLSSKSLKEIEELKINVEN 286

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
                K  +  E+   +  R         A + F+     + +PT  I +    + + + 
Sbjct: 287 GSKHPK-KVKEELAMEIVDRFHGAGFGEKAKDEFEKVFAKKDIPT-EIEEFHFEKEIWIC 344

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +    ST++ARR +K+NA+ IN   I+++KL ++       G   L  GKK+   
Sbjct: 345 QALVDSKLVDSTSQARRDIKANAVSINQEKINDDKLILEK------GEYILQKGKKSFAK 398

Query: 414 CHL 416
             +
Sbjct: 399 ILI 401


>gi|315636072|ref|ZP_07891329.1| tyrosine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479641|gb|EFU70317.1| tyrosine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 402

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 96/423 (22%), Positives = 181/423 (42%), Gaps = 29/423 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLT 55
           M     + L+ +  RG + +I +   ++ L               G+D TA  +H GH  
Sbjct: 1   MDNRVLEALNEIK-RG-VAEIIDFEAIEKLIKRYFETGENFYVKAGFDPTAPDIHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L   QK G     L+G  T+ IGDP+ + E+R+++  +++  N E  K      + 
Sbjct: 59  LIQKLALFQKFGGIVQFLIGDFTATIGDPTGKSETRKVLSREQVLNNAETYKQQVFKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    ++ N +WL  +     L  + S  +V RML  +    R      ++  EF 
Sbjct: 119 ----ENKTQVVFNSSWLNELGT-AGLIALASNLTVARMLERDDFSKRYSSNTPIAVSEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL-TSPLLTT-AS 233
           Y +LQ YD + L    +  +++GG+DQ  N++ G  L +   + K  A+   P+L     
Sbjct: 174 YPLLQGYDSIAL----NSDVELGGTDQKFNLLMGRTLQKAYNSKKQQAVLMMPILEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   I +      P++ +    +I D  +  + + L++  + EI+ +      
Sbjct: 230 VQKMSKSLGNYIGVT---DEPFDMFGKILSISDELMWRYYELLSSKSLKEIEELKINVEN 286

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
                K  +  E+   +  R         A + F+     + +PT  I +    + + + 
Sbjct: 287 GSKHPK-KVKEELAMEIVDRFHGTGFGEKAKDEFEKVFAKKDIPT-EIEEFHFEKEIWIC 344

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +    ST++ARR +K+NA+ IN   I+++KL ++       G   L  GKK+   
Sbjct: 345 QALVDSKLVDSTSQARRDIKANAVSINQEKINDDKLILEK------GEYILQKGKKSFAK 398

Query: 414 CHL 416
             +
Sbjct: 399 ILI 401


>gi|242309164|ref|ZP_04808319.1| tyrosyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239524205|gb|EEQ64071.1| tyrosyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 404

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 180/418 (43%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG   +I     +  L S             G+D TA  LH GH   L  L   
Sbjct: 11  LEEIQ-RGT-QEIIGLDYIKKLVSDYFKEGKTFKVKAGFDPTAPDLHLGHTVLLQKLATF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK G +   L+G  T +IGDPS + E+R+ +  +++  N +  +   +  +      +  
Sbjct: 69  QKYGGRVYFLIGDFTGMIGDPSGKSETRKPLSKEQVLANAKTYQEQVTKVLD----SSKM 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N  WL        + E+ + FSV RML  +    R K +  +S +EF Y +LQ YD
Sbjct: 125 EIVFNSKWL-DELGTRGMIELSAKFSVARMLERDDFEKRFKAQSPISIVEFFYPLLQGYD 183

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKMGKTL 241
            V L    DC ++ GG+DQ  N++ G  L        +   +  PLL       KM K+L
Sbjct: 184 SVAL----DCDIECGGTDQKFNLLMGRHLQRAYGMSKEQSVVMVPLLEGLDGVNKMSKSL 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEA 298
              + + +    P   +    +I D+ +  + + L+T  + EI  + +   K        
Sbjct: 240 GNYVGITQ---EPKEMFGRLLSISDSLMWRYYELLSTKSLQEIAELKEGVEKGSLHPKAV 296

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI T  + +E AE A    ++ F        MPT      E + G+ +  L+ +
Sbjct: 297 KENLALEIITRYYNKESAEAAREEFIKVFSKDELPSDMPTF-----EKNAGIWIAQLMNE 351

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              +TS++EA R +K   +KIN   ++N KL ++       G   +  GK+      +
Sbjct: 352 CALSTSSSEALRLIKQGGVKINGERLTNTKLNLEA------GEYVIQAGKRKFARILI 403


>gi|262377634|ref|ZP_06070854.1| tyrosyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262307393|gb|EEY88536.1| tyrosyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 408

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 101/425 (23%), Positives = 178/425 (41%), Gaps = 26/425 (6%)

Query: 1   MPAFKSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M    S+FL       L +RG    IS    L  L     +    G+D TA  LH GH  
Sbjct: 1   MDFVMSNFLPAEEQLALIQRGTHEIISEEDLLKKLKQNRPLKIKAGFDPTAPDLHLGHTV 60

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L   Q  GH+ + L+G  T++IGDP+ +  +R  +  +++ EN +  +      + 
Sbjct: 61  LINKLKVFQDLGHEVLFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILD 120

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    ++ N  W       DL+ ++ S  +V RML  +    R   +Q ++  EF 
Sbjct: 121 PD----KTKVVFNSEWFAQKTAADLI-QLASQQTVARMLERDDFTKRYNNQQPIAIHEFL 175

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASG 234
           Y ++Q YD V L    +  +++GG+DQ  N++ G  L  R        +T P+L      
Sbjct: 176 YPLVQGYDSVAL----EADVELGGTDQTFNLLMGRTLQGRYNQEAQVCITVPILEGLDGV 231

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQG 292
            KM K+L   I +     +P   +Q   ++ DA +  +   L+   + EI +      +G
Sbjct: 232 NKMSKSLGNYIGVF---DAPGAMYQKVLSMPDALIERYFDLLSFKTIEEIQQLLKEVAEG 288

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           +   E KKI+A E+    HG E A  A   A          +  P ++IS+ E    + +
Sbjct: 289 RNPQEVKKILALELVERFHGAEAAANAHKGAGNIITEGELPEGTPEVTISRGEFGGEIFI 348

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            +++ +AG   +  +A+  L   A+K++   + +    +K         + +   KK   
Sbjct: 349 TSILREAGLTKNAAQAKDALGRGAVKVDWQTV-DTTYSVKE-----NVTLIVQASKKAIA 402

Query: 413 ICHLC 417
                
Sbjct: 403 KVTFV 407


>gi|149194046|ref|ZP_01871144.1| tyrosyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135999|gb|EDM24477.1| tyrosyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 410

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 181/419 (43%), Gaps = 34/419 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + ++ +  RG  ++I    +++ L ++        T   G+D TA  LH GH   L  L 
Sbjct: 16  EAIAEIK-RGS-NEIIGLEKIEELVNKFLHTGERFTIKAGFDPTAPDLHLGHTVLLQKLK 73

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             QK G K   L+G  T+ IGDP+ +  +R+M+  +E+++N +  +      +       
Sbjct: 74  TFQKYGAKVQFLIGDFTAQIGDPTGKSATRKMLTPEEVKQNAKTYEAQVFKILDKDL--- 130

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N TWL  +    ++    ++ +V RML  +    R K +  ++  EF Y +LQ 
Sbjct: 131 -TDVVFNSTWLNKLGATGIVELTTTY-TVARMLERDDFEKRFKSQTPIAISEFIYPLLQG 188

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKMGK 239
           YD V L       +++GG+DQ  N++ G  L +      +   +  PLL       KM K
Sbjct: 189 YDSVALK----SDIEIGGTDQKFNLLMGRHLQKVYNIGKEQSVIMMPLLVGLDGVNKMSK 244

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA- 298
           +L   I + ++  + +       +I D  +  + + L+   + EI  + +     +N   
Sbjct: 245 SLGNYIGITEDANTIFAKV---MSISDELMWDWYELLSDKSIEEIKELKEQVKNGLNPKV 301

Query: 299 -KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+++A EI    HG+   EKA     +    +     +    I          ++  +V
Sbjct: 302 VKEMLAIEIVDRFHGKGTGEKAKEHFDKVHKQNQIPDDIEEFEI------EPQNIVDALV 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
               A S +EARRH+K  A++IN   IS++ +     + +      L  GK+      +
Sbjct: 356 TTKLANSKSEARRHIKGGAVRINQEKISSQDI-----NLEKDKEYILQIGKRKFAKVRV 409


>gi|146317777|ref|YP_001197489.1| tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145688583|gb|ABP89089.1| Tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 307

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/291 (39%), Positives = 167/291 (57%), Gaps = 2/291 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHE 290


>gi|86606736|ref|YP_475499.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|115305823|sp|Q2JSX8|SYY_SYNJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|86555278|gb|ABD00236.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 417

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 173/414 (41%), Gaps = 23/414 (5%)

Query: 9   LSILSERGFIHQISNPRE-LDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +++RG           L      +   +   +G D T   LH GH   L  L   Q 
Sbjct: 21  IAEITQRGVAEVFPGGAAALAERLATTDRPLRVKLGIDPTRPDLHLGHAVVLRKLRQFQD 80

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  I L+G  T+++GDP+ + E+R  +   E++EN           + + T     + 
Sbjct: 81  AGHVAILLIGDFTALVGDPTGQSEARPRLTPAEVEENARTYLEQAGKILDFETPGRLEVR 140

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            N   WL  +   +L+  + +  +V +ML+ E    R +    +   EF Y +LQ YD V
Sbjct: 141 RN-SEWLARLTLSELIE-LQAQMTVGQMLAKEDFAQRYRSGTPIYLHEFLYPLLQGYDSV 198

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L    +  +++GG+DQ  N++ G +L         F LT PLL    G  KM K+ +  
Sbjct: 199 AL----EADVELGGTDQRFNLLVGRELQLWKGQTPQFCLTVPLLEGLDGYQKMSKSKNNY 254

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L ++  + Y+       + D  V  + + LT++P SE+         +  + + ++A 
Sbjct: 255 VGLTEDPLTMYS---KLEKVPDQLVERYFELLTSVPPSELPA-------DPRQRQILLAK 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +    H  E AE+A   A          +     + +   +S  + L  ++ ++G   S
Sbjct: 305 TLVAQFHSSEAAEEAQRTAQALVLQGNLVETGSIPTFAIQCLSYPVKLSYILRESGLCKS 364

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EARR ++  A++++   + +  L+             L  GKK      + G
Sbjct: 365 AAEARRQIQGGAVRLDGQKVEDPDLEFAQASELDGR--VLQVGKKAFCRL-VVG 415


>gi|163783432|ref|ZP_02178424.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881354|gb|EDP74866.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 418

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 134/426 (31%), Positives = 228/426 (53%), Gaps = 26/426 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F  D +  L+ RGFI  +++     I   +  +T Y G+D TA SLH G+L  +  L   
Sbjct: 3   FIKDAIEELTWRGFIKDVTDK---SIEVKEEKLTVYAGFDPTAPSLHLGNLIPVAALRVF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK G+  I ++GG T  IGDPS + + R ++  +++  N EKI+      +       D 
Sbjct: 60  QKHGNPVIVIVGGATGRIGDPSGKSKERPILPEEDLIRNKEKIEVQIKKLL-----GKDV 114

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L+N  W  +   ID LR++G + SVNR++    + +RL RE+ LSF EF Y +LQA+D
Sbjct: 115 PVLDNYEWFKNFGLIDFLRDVGKYVSVNRLVKHTFINNRLSREEFLSFAEFTYPLLQAFD 174

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-- 241
           F+ L   + C++Q+GGSDQWGNI+ G++L +RL+  K+F +T PLLTT  G K+GK+   
Sbjct: 175 FLHLYDRFGCKVQIGGSDQWGNIVEGVELIQRLRREKVFGVTFPLLTTEDGHKIGKSEGG 234

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEA 298
              +WL++ MTSP++ +QY+  + D+D +   +  +   + E          Q  E+ + 
Sbjct: 235 KKTLWLDESMTSPFDAYQYFIRLSDSDAIKLFRLFSLSMVKEEVENIIEEHRQSPELRKV 294

Query: 299 KKIIATEITTMVHGREEAEKAAT--AAMECFDMSIHSQHMP-------TISISKDEVSRG 349
           +K++A E+ T VHG+E A +       +   D   + + +          +++KDE+ + 
Sbjct: 295 QKLLAREVITWVHGKEAAVECEKLSDFLFSKDPKTNLEDISKRAISWVATTVAKDEI-KS 353

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + L  L +KA    S NE R +L +  I++N   + ++      + F +   + ++ GK+
Sbjct: 354 LQLSDLFMKANLVKSKNEFRSNLMNKGIRVNGRTVVSD--MPATELFRNRSVVIIAKGKQ 411

Query: 410 NHIICH 415
              I  
Sbjct: 412 R-GIVK 416


>gi|307178905|gb|EFN67433.1| Probable tyrosyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 426

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 128/416 (30%), Positives = 206/416 (49%), Gaps = 22/416 (5%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +N  ++  L ++     Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +I
Sbjct: 9   TNTNKIIDLLNKSPQCVYAGFDPTADSLHIGNLLILMNLLHWQRAGHQVIALVGGATGLI 68

Query: 82  GDPSFRDESRRMMRSQEIQENIEK---------IKGIFSSFIKYGTGKTDALMLNNETWL 132
           GDPS R + R  M    ++EN++                 +          +++NN  W 
Sbjct: 69  GDPSHRKKERVEMDKYLMEENLKSIINNIEIIFNNHQTYFWKNRQEHLKPLIIVNNLDWY 128

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            ++  I+ +R IG +F +  ML   SV+SRL  +  +SF EF Y + QAYD+ +L K Y 
Sbjct: 129 TNVNVIEFVRSIGKYFRMGTMLGRASVQSRLNSDTGMSFTEFTYQVFQAYDWFQLMKKYK 188

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           CR Q+GGSDQ GNI+ G DL  + +  +++ +T PL+T   G K GK+L  A+WL+   +
Sbjct: 189 CRFQIGGSDQMGNIMSGYDLITKTEKQEVYGITLPLITAEGGKKFGKSLLNAVWLSSTKS 248

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMV 310
           S +  +QY+    D+DV  F K  T +P+++I  +     K  E   A+KI+A ++T +V
Sbjct: 249 SSFQLYQYFIRTKDSDVEKFLKLFTFIPLNKITEIMNDHMKSSEDRRAQKILAEQVTLLV 308

Query: 311 HGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAG 360
           HG +    A  A+   +D SI S                +I       G+ +  L  KA 
Sbjct: 309 HGEDGLLAAKRASAALYDKSIESFTRMNALELADVFEDATIVDILSEPGLTIYDLARKAK 368

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
              + ++A+R + +    +N+  I+N    +       S     +  GKK + I  
Sbjct: 369 CFKTDHDAQRIITAGGFYVNHQKITNLNEVVVPGIHILSNNLSLVRVGKKTYHIIR 424


>gi|226952841|ref|ZP_03823305.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836462|gb|EEH68845.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 410

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 173/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLRVKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDPS +  +R  +  +++  N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPSGKSATRPPLSKEQVLANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 238 KSLGNYIGVF---DTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKVLLDEMAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E AE A  +A          +  P + IS+ E    + + T++
Sbjct: 295 EIKRILALELVERFHDAEAAENAHKSAGNRVTEGEVPEDTPEVIISRGEFGGELFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ +++ +    +K         + +  GKK      
Sbjct: 355 RVAGLNPNAASAKDAVGRGAVKVDWNVV-DMSYSVKE-----NVTLIIQSGKKAIARVT 407


>gi|296331495|ref|ZP_06873967.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676482|ref|YP_003868154.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151610|gb|EFG92487.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414726|gb|ADM39845.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 412

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 176/406 (43%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL         +   +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELRAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +     +    +  N  WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFQQFGKVLD----QEKVELHYNSKWLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   + + ++    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 143 TLNL-EDVIDLAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 197

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL       KM K+    I +++   
Sbjct: 198 DIELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGIDEH-- 255

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E     +  +       +AK ++A  I  M
Sbjct: 256 -PNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRM 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E AE A  +    F  +   + +P ++       + M ++ ++VK    +S +EAR
Sbjct: 315 YHGAEAAETAEHSFKTVFQENSLPEDIPAVNWKG---EKKMAIIDMLVKLELLSSKSEAR 371

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++IN   I++        D     N+ +  GK+  +   
Sbjct: 372 RMIQNGGVRINGEKITDIHA-----DAVIKENMIIQVGKRKFLKLQ 412


>gi|325109325|ref|YP_004270393.1| tyrosyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969593|gb|ADY60371.1| tyrosyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 408

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 91/417 (21%), Positives = 180/417 (43%), Gaps = 30/417 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L +RG + +I    EL     +       +    G D T   +H GH   L  +   Q+
Sbjct: 13  ELIQRG-VEKIVPENELRQKLEKSRETGTPLRIKYGIDPTGIDMHLGHTVPLRKMRQFQE 71

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ + ++G  T+++GDPS RD++R  + +++++ N +      +  I        A +
Sbjct: 72  MGHQAVIIIGNYTAMVGDPSGRDDTRARLTAEQVEANAQDYLRQVAKVIDLD----AAEI 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  W   + +  +L  + S  +V ++L+ E    R K EQ++   E  Y ++Q +D V
Sbjct: 128 HRNGDWFSKMDFARMLE-LCSKVTVAQLLNREDFSKRFKAEQAIFLHECLYPLMQGWDSV 186

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGA 244
           E+       +++GG++Q    +   DL    +  +   + SP+L  T    +MGK+L   
Sbjct: 187 EIR----ADIELGGTEQLYTFMLARDLQRDQEMSQQIGIMSPILVGTDGVRRMGKSLGNY 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           I +     +PY+  + +  + D  +  + + LT LP+ +++ +         +AK+ +A 
Sbjct: 243 IGIA---DAPYDMAKKFMQLPDDVMRPYFELLTDLPLDQVEEILAGHP---KQAKQALAK 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFAT 363
            +    H  EE E A     +          +P +++   ++  G M  + L+   G   
Sbjct: 297 LVIGEYHSSEEGEAAIARWEQEISGGGLPADIPEVNLEPAQLEDGQMKAVDLLHALGLVA 356

Query: 364 STNEARRHLKSNAIKINNSI--ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  E+RR ++    K+      ++     I ++D      + +  GKK      L G
Sbjct: 357 SKGESRRLIQQGGAKLGEEKTPMTAIDQLIPIED-----GLLVWAGKKRFCRVRLNG 408


>gi|297170312|gb|ADI21348.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_10D20]
          Length = 404

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 174/414 (42%), Gaps = 27/414 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +RG    I       +L S+  +T   G+D T++ LH GH   +  L   Q  GH  
Sbjct: 10  EIIKRGSDEIIPEDAFKKLLTSKKKLTVKAGFDPTSADLHLGHTVLINKLKAFQDLGHTV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS  +E+R  +  +++ EN +         +     K    +  N +
Sbjct: 70  IFLIGDFTGLIGDPSGVNETRPNIDEKKLAENSKTYADQVFKILD----KKKTKIKFNSS 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +K  + +R      +V RML  +  + R +  + +S  EF Y ++Q +D   L   
Sbjct: 126 WFKKMKLDEFIRLSSIM-TVARMLERDDFKKRYENNKPISLHEFLYPLVQGFDSYALK-- 182

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G ++ +     +   +T PLL       KM K+L+  I LN 
Sbjct: 183 --ADIELGGTDQKFNLLVGREVQKHFGQDEQVTITVPLLEGLDGVKKMSKSLNNYIALN- 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKIIATEIT 307
               P   +    +I D  +  +   L+     EI           N    KK +ATEI 
Sbjct: 240 --DEPNEMFGKIMSISDNLMWRYFDLLSFRSNDEIASFRDKVKNGENPMTFKKKLATEIV 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK----AGFAT 363
              + ++ +E A  A    F   +    +P   I++   +  + ++ L+        F  
Sbjct: 298 ERFYDKKSSENAEIAFTNVFSNKLEPSEVPIFEINE---TSSISIVELLTHEDLGNEFIQ 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S +E RR +K + IK+NN  + N  L I   +           GK+ H+   L 
Sbjct: 355 SKSECRRLIKQSGIKMNNKKVENPDLLI---NLGEENYF--QIGKRKHLKIKLV 403


>gi|294648689|ref|ZP_06726150.1| tyrosine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825419|gb|EFF84161.1| tyrosine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 410

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 173/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLRVKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDPS +  +R  +  +++  N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPSGKSATRPPLSKEQVLANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 238 KSLGNYIGVF---DTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKILLDEMAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E AE A  +A          +  P + IS+ E    + + T++
Sbjct: 295 EIKRILALELVERFHDAEAAENAHKSAGNRVTEGEVPEDTPEVIISRGEFGGELFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ +++ +    +K         + +  GKK      
Sbjct: 355 RVAGLNPNAASAKDAVGRGAVKVDWNVV-DMSYSVKE-----NVTLIIQSGKKAIARVT 407


>gi|50289233|ref|XP_447047.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526356|emb|CAG59980.1| unnamed protein product [Candida glabrata]
          Length = 462

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 137/439 (31%), Positives = 208/439 (47%), Gaps = 32/439 (7%)

Query: 7   DFLSILSERGFIHQIS-NPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S    +L+     G  V  Y G D TA S+H G+L  LM+L    
Sbjct: 24  NVLRELRDRGLVSQVSAPEEKLEEQLESGQKVKLYCGVDPTAKSIHLGNLVPLMVLLHFY 83

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK---- 120
             GH  ++L+GG T  +GDPS R   R +M  +    N+  I G    F   G       
Sbjct: 84  VRGHDIVTLVGGATGCVGDPSGRTTERSLMEDKTRLSNVSSISGQLEKFFINGLAYYNTK 143

Query: 121 ---------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                       +  NN  W   +K +D L   G    V  ML+ +SV +RL  + SL F
Sbjct: 144 NKDRNETLPGKHIKENNYNWWKDVKMLDFLANYGRHIRVQSMLARDSVTARLNTQNSLGF 203

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLL 229
            EF Y ILQAYDF  L K Y   +Q+GG+DQWGNI  GIDL  R   +T + + +T PLL
Sbjct: 204 NEFTYQILQAYDFFHLNKTYGVSIQVGGNDQWGNITAGIDLISRLSSRTKQAYGVTVPLL 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
            TASG K GK+   A++++  +++PY+ +Q++ N  D DV  F K  + L + EI+ M K
Sbjct: 264 QTASGEKFGKSAGNAVFIDPSISTPYDIFQFFLNTLDEDVPRFLKTFSFLTIEEIESMTK 323

Query: 290 LQG--KEINEAKKIIATEITTMVHGREEAEKAA----TAAMECFDMSIHSQHMPTISISK 343
                  +   +K++A EIT M+ G    +KA            D  +    +  I + +
Sbjct: 324 RHNEKPHLRLGQKMLAKEITDMLFGVGNGDKAQSISNIIFGTMEDKEMKLSGLELIDMFR 383

Query: 344 D-----EVSRGMGLLTLIVKAGFA-TSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-F 396
           +     +  RG  L+ L+  +    +S +EARR ++  +I ++ S +   K      D  
Sbjct: 384 EARILQQAKRGESLVALV--SRLTHSSKSEARRKIEQGSIYLHTSRVKITKDINDYNDYL 441

Query: 397 DSTGNIKLSFGKKNHIICH 415
                + L  GK+   +  
Sbjct: 442 IDDKVLLLRIGKQKCFVIE 460


>gi|153003961|ref|YP_001378286.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027534|gb|ABS25302.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 416

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 165/410 (40%), Gaps = 38/410 (9%)

Query: 24  PRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            ++L     +       +    G+D TA  LH GH   L  +   Q+ GH  I L+G  T
Sbjct: 29  EKDLRARLQKAYDTGVPLRVKAGFDPTAPDLHLGHTVLLSRMRRFQQFGHTVIFLIGDFT 88

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
            +IGDP+ R+ +R  +  ++I +N E  K      +          +  N  WL ++ + 
Sbjct: 89  GLIGDPTGRNSTRPPLTPEQIAQNAETYKKQVFKILDPA----ATEVRYNSEWLGAMGFA 144

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           D++  + S ++V RML  +  + R      +S  EF Y + QAYD V L       +++G
Sbjct: 145 DVI-RLASRYTVARMLERDDFKKRYTGNVPISVHEFLYPLAQAYDSVALK----ADVELG 199

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-----------KMGKTLSGAIWL 247
            SDQ  N++ G  +    +      LT P+L                 KM K+L   + +
Sbjct: 200 SSDQLFNLLVGRAIMPDYQLTPQIVLTGPILEGLDAKLDPESRRIVGNKMSKSLGNYVGV 259

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            +    P   +    ++ D  +  + + L+    +EI  +         +AK  +A EI 
Sbjct: 260 AEA---PEEQFGKLMSVSDDLMWRYYELLSDRTSAEIAALRAGHP---KDAKIALAKEIV 313

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  HG + A +A     +          +   +++  +    + L  L+  A    S +E
Sbjct: 314 TRFHGADAATRAEEHFAQVHARREVPDEVEERAVAL-DGQAALPLARLLADAKVVASGSE 372

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ARR +    + +N   +S+EK  +        G   +  GK+  +   L 
Sbjct: 373 ARRLIAQGGVSVNGERVSDEKATLGA------GEWLVKVGKRRFVRLKLA 416


>gi|208434686|ref|YP_002266352.1| tyrosyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432615|gb|ACI27486.1| tyrosyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 402

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISVALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGMIELCAKFSVARMLERDDFAKRHKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++    +P I +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAFKAKEQFSKVFSANL----LPEI-LSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|256821638|ref|YP_003145601.1| tyrosyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795177|gb|ACV25833.1| tyrosyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 398

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 178/419 (42%), Gaps = 25/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++ F  I  +RG    +     L+ L S   +    G+D TA  LH GH   +  L
Sbjct: 1   MTDVQAAFAEI--KRGAEEILLEDELLEKLKSGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +   ++  N E  K      +      
Sbjct: 59  RQFQQLGHEVIFLIGDFTGMIGDPTGKNATRKPLTRDDVLANAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W   +     + ++ S  +V RML  +  + R   EQ ++  EF Y ++Q
Sbjct: 116 -KTTIAFNSEWCEKLGA-AGMIKLASHTTVARMLERDDFKKRYGNEQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAL----ESDVELGGTDQRFNLLMGRELQKHYGQRPQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +L   + + +    P   +Q   +I D+ +  + + L+  P+ EID + K   +     +
Sbjct: 230 SLGNYVGITEA---PGVMYQKLLSIPDSMMWRYFELLSFRPLPEIDELKKQVEQGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H +E A+ A  AA          +  P + +   E +    +   I 
Sbjct: 287 IKIELAKEIIERFHDKEAADNAHKAAGNIIKEGEVPEGTPQVEVDM-EGAEQFPIGATIN 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG A+++ +A+  LK+  +K++  ++               G   +  GKK      L
Sbjct: 346 RAGLASNSAQAKDMLKNGRVKVDWEVVE-------PSLMLKPGQYLIQAGKKKIAYVTL 397


>gi|317014184|gb|ADU81620.1| tyrosyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 402

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 101/426 (23%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISVALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFVVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGMIELCTKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILH 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|303232935|ref|ZP_07319616.1| tyrosine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480933|gb|EFL44012.1| tyrosine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 451

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 109/402 (27%), Positives = 174/402 (43%), Gaps = 21/402 (5%)

Query: 20  QISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI    EL     +   +T  +G D T+  LH GH   L  +   Q  GH+ + ++G GT
Sbjct: 63  QIVPIDELKAKLEKGKPLTIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVVLIIGNGT 122

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  +  ++++ N +         +          +++N  WL  +   
Sbjct: 123 ALIGDPSGRDSTRPPLTEEQVETNAQTYVAQAMKILDP----EKTSIVHNGDWLKPLDLA 178

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  +   F+V R+L  E    R   EQS+S  EF Y +LQAYD V ++      L+MG
Sbjct: 179 HMLSIMSK-FNVARILEREDFHKRYTNEQSISLHEFIYPVLQAYDSVVVS----ADLEMG 233

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL          ALT PLL       KM K+    + L      P + 
Sbjct: 234 GNDQIFNLLAGRDLMRAEGMEPQVALTMPLLVGIDGSKKMSKSYGNYVGLT---DEPNDM 290

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGRE 314
           +    +I D  + S+ +  +T  + EID + +          E K+ +A  I  + HG  
Sbjct: 291 FGKLMSIPDELIASYYRLCSTFSIDEIDAVDQQFKDNTANPYELKRKLAVNIVDLYHGAG 350

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHL 372
               A  A    F      + +P  S+S  + +    + L  L+V    A ST EARR +
Sbjct: 351 AGAAAQDAFDATFKHGDIPEDIPEFSLSCVQENDEHMVYLAKLLVDVKLAPSTGEARRRI 410

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +KIN   +  +   +    F S     + FGK++    
Sbjct: 411 DGGGVKINGVAVKPKCYNLPADTFTSG--CVMQFGKRSWARL 450


>gi|224417654|ref|ZP_03655660.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827006|ref|ZP_04869891.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141200|ref|ZP_07803393.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510412|gb|EES89071.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130231|gb|EFR47848.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 404

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 34/414 (8%)

Query: 13  SERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +RG   +I     ++ L      +        G+D TA  LH GH   L  L   QK G
Sbjct: 14  IQRGT-QEIIGLEYIEKLIRDYFENGKTFKVKAGFDPTAPDLHLGHTVLLQKLATFQKYG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                L+G  T +IGDP+ + E+R+ +  +++  N +  +      +      +   +  
Sbjct: 73  GIVCFLIGDFTGMIGDPTGKSETRKPLNKEQVLANAKTYEEQVYKVLD----SSKMEIAF 128

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++    ++  + + FSV RML  +    R K +  +S +EF Y +LQ YD V L
Sbjct: 129 NSKWLDNLGTRGMIE-LAAKFSVARMLERDDFEKRFKNQNPISIVEFFYPLLQGYDSVAL 187

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
               +C ++ GG+DQ  N++ G  L        +   +  PLL       KM K+L   +
Sbjct: 188 ----ECDIECGGTDQKFNLLMGRHLQRAYGIPKEQSVVMVPLLEGLDGVHKMSKSLGNYV 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            + +    P   +    +I D  +  + + L++  ++EI  + +   K       AK+ +
Sbjct: 244 GITQ---EPKEMFGRLLSISDTLMWRYYELLSSKSLAEIQEIKESVEKGNLHPKTAKENL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI T  +  ++A++A     + F        MPT      E + G+ +  L+ + G  
Sbjct: 301 ALEIITRYYDAQKAKEAKEEFDKVFSKDEMPSQMPTF-----EKNSGIWIAQLMSECGLC 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            S +EA R +K   +K+N   + + KL +++      G   +  GK+      +
Sbjct: 356 VSNSEALRLIKQGGVKVNGQKLEDSKLNLQI------GEYVIQAGKRKFARVII 403


>gi|110004042|emb|CAK98382.1| probable tyrosyl-trna synthetase classIprotein [Spiroplasma citri]
          Length = 421

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 142/423 (33%), Positives = 210/423 (49%), Gaps = 18/423 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + L  L  RG + Q++N  +L           Y G+D T  SLH GHL Q+MLL   
Sbjct: 2   MVKNILEELRWRGLLKQVTNETKLLKAQELKK-GVYCGFDPTGDSLHVGHLIQIMLLKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +  G +PI+++GGGT +IGDPS +   R ++  + I+ N+E I       I         
Sbjct: 61  EMFGFQPITIIGGGTGMIGDPSGKKAERVLLDDKTIKHNVETISQQMHQLI-----GAKI 115

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  WL  +  ID LR +G  F+++ +L+ E++ +R+  E  LS+ EF Y +LQAYD
Sbjct: 116 KMVNNAEWLQKMTLIDFLRNVGKDFNISYLLAKENIATRI--EVGLSYTEFAYTLLQAYD 173

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F +L  NYDC +Q GGSDQWGNI  G D   +          LT  LLT A G+K GKT 
Sbjct: 174 FYQLYINYDCAVQTGGSDQWGNITSGTDYIYKQIGEDNLACGLTMNLLTKADGSKFGKTE 233

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAK 299
           SGA+WL+ + TSPY F+Q++ N DD +     + LT L   +I  +      E      +
Sbjct: 234 SGAVWLDSKKTSPYEFYQFFYNQDDQETAKLLRYLTMLSEKKIIALETAHQNEPTQRIVQ 293

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLL 353
           K +A E+T  VH     + A   +   F  S+H      +    + +         + LL
Sbjct: 294 KKLAEEVTLFVHQAAGLKTAQIVSEALFKGSLHELSEQQLEQLHNSLPNFHLTNFNLPLL 353

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+++A   TS  E R  L+  AI IN  II  E   +    F     + +  GK+ + +
Sbjct: 354 DLLIQAEIVTSKREGREFLEQAAITINGQIIKEETWTLAKDKFLFNKYLIIRRGKRKYHL 413

Query: 414 CHL 416
            +L
Sbjct: 414 IYL 416


>gi|291486442|dbj|BAI87517.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 413

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 179/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL         +   +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 28  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +          +  N  WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLDP----EKVELHYNSKWLK 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   + + E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 144 TLNL-EDVIELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL       KM K+    I +N+   
Sbjct: 199 DIELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINEH-- 256

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E     +  +       +AK ++A  I  M
Sbjct: 257 -PNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A  +    F  +   + +P ++       + + ++ L+VK    +S +EAR
Sbjct: 316 YHGEKAAEAAEHSFKTVFQENSLPEDIPAVNWKG---EKTIAMIDLLVKLKILSSKSEAR 372

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++I+   I++   + ++++     N+ +  GK+  +   
Sbjct: 373 RMIQNGGVRIDGEKITDIHAKAEIRE-----NMIIQVGKRKFLKLQ 413


>gi|210622728|ref|ZP_03293320.1| hypothetical protein CLOHIR_01268 [Clostridium hiranonis DSM 13275]
 gi|210154060|gb|EEA85066.1| hypothetical protein CLOHIR_01268 [Clostridium hiranonis DSM 13275]
          Length = 431

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 82/398 (20%), Positives = 172/398 (43%), Gaps = 30/398 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + + ++L    ++       +   +G D +A  +H GH   L  +  LQ  GH+ + 
Sbjct: 46  VDSLIDEKDLKEKLTKAQKEDKPLVIKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQVVI 105

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ + ++++ EN +  +      +         ++  N  WL
Sbjct: 106 IIGDFTGKIGDPTGKSKTRKALTTEQVLENAKTYQEQIFKVLDKD----KTIVRYNSEWL 161

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + + ++ +  +V RML  E  + R + +  +S  EF Y ++QAYD + +    D
Sbjct: 162 GKLNF-EEVIKLAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIAI----D 216

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L           +  PLL       KM K+L   I +++E 
Sbjct: 217 ADIELGGTDQRFNLLMGRSLQREFDKESQVVIMMPLLEGLDGVNKMSKSLGNYIGIDEEA 276

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTM 309
              Y   Q    I D  ++ +   +T +    +  +           + K  +A EI T+
Sbjct: 277 GLMY---QKAMEIPDELIIKYYNLVTDVHPDAVAEIEAKLEGGANPRDIKMELAKEIVTL 333

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E+A++A       F        + T+ ++  ++     +  + V+     S +E R
Sbjct: 334 YHGEEKAQEAENRFKSVFQKGNIPDDILTVEVAAADL----DIAGIAVENKLVPSKSEIR 389

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           R  K   +K+N   +++          ++ G + +  G
Sbjct: 390 RLAKQGGVKVNGEKVNDLNAV------EANGELVIQIG 421


>gi|108563184|ref|YP_627500.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107836957|gb|ABF84826.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 402

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 189/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISTALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N  WL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 EKH----TEVCFNSAWL-DTLGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++    +P I +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANL----LPEI-LSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|210134976|ref|YP_002301415.1| tyrosyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210132944|gb|ACJ07935.1| tyrosyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 402

 Score =  282 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 190/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKVSIALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 EKH----TEVCFNSTWL-DALGAKGMIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRSYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+T  + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSTKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++    +P I +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAFKAKEQFSKVFSANL----LPEI-LSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|47211197|emb|CAF95269.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 480

 Score =  282 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 115/439 (26%), Positives = 203/439 (46%), Gaps = 25/439 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNP----RELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
               +  L  L +RG + +         +L  L   G  T Y G+D TA SLH G+L  L
Sbjct: 38  STLLNGLLFSLYKRGVLKESFPESAAQDQLPQLLQAGSQTVYCGFDPTADSLHVGNLLAL 97

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           + L   +  GH  ++++GG T+ IGDPS +   R  + +   + N   I+          
Sbjct: 98  IALLHFRNAGHHVLAVVGGATAQIGDPSGKARERERLSADTAEANTRGIRESLQRIFTNH 157

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                          +LNN +W      ++ L E G  F +  MLS  SV++RL+    +
Sbjct: 158 ELYFHDSAKKLGTVTVLNNLSWYKDRGVVEFLAEAGRHFRMGTMLSRHSVQARLRSPDGM 217

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           S  EF Y + QA+DF  L + Y C++Q+GG+DQ GN++ G +   ++   +++ L  PL+
Sbjct: 218 SLAEFTYQVFQAHDFYHLNQIYGCKIQLGGTDQLGNLMSGHEYIHKVSGEEVYGLAIPLV 277

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA- 288
           T++ G K+GKT   A+WLN++ TSP+  +Q++  + D+ +  + K  T LP++E++R+  
Sbjct: 278 TSSVGDKLGKTAGNAVWLNRDRTSPFQLYQFFLRLPDSGIERYLKLFTFLPLAEVERLME 337

Query: 289 -KLQGKEINEAKKIIATEITTMVHGREEAEKAATA----------AMECFDMSIHSQHMP 337
            + +      A K +A E+T +VHG+E  + A             A+E        +   
Sbjct: 338 QQREDPGKRLAHKRLAAEVTKLVHGKEGLDSAKRCTNVLYHNSVQALEEMSDGELQELFQ 397

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
                +  +  G  ++    K     + ++    +   A+ IN++ +   +  +  +   
Sbjct: 398 EAPFHELLLEPGTTVIDACRKVDAIPAGHKGYLMVSEGAVWINHTRVDKPEQVLIPKLHI 457

Query: 397 DSTGNIKLSFGKKNHIICH 415
            S G   +  GKKN  I  
Sbjct: 458 LSNGLTLIRVGKKNFSIIK 476


>gi|15611778|ref|NP_223429.1| tyrosyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135060|sp|Q9ZL69|SYY_HELPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|4155267|gb|AAD06286.1| TYROSYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 402

 Score =  282 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 102/426 (23%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISVALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  K      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N  WL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSAWL-DALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILH 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +         GN  +  GKK 
Sbjct: 342 GVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|254779253|ref|YP_003057358.1| tyrosyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001164|emb|CAX29123.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Helicobacter pylori B38]
          Length = 402

 Score =  282 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 184/423 (43%), Gaps = 29/423 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEIK-RGA-NEIIGLEYIEKLVRKYYKTNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N  WL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 EKH----TEVCFNSAWL-DALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRSYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           +    K  +  E+   +  R    + A  A E F     +  +P I +S+ +   G+G+L
Sbjct: 287 QTLHPK-AVKEELAGEIVARYYDNEQAIKAKEQFSKVFSANLLPEI-LSESDFDEGVGIL 344

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++ + GF  ST++ARR ++   +KIN  +I +E  +     F       +  GKK  + 
Sbjct: 345 DVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYR-----FVKGNY-VIQLGKKRFMK 398

Query: 414 CHL 416
            ++
Sbjct: 399 LNI 401


>gi|328715390|ref|XP_001944544.2| PREDICTED: probable tyrosyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 469

 Score =  282 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 137/437 (31%), Positives = 211/437 (48%), Gaps = 26/437 (5%)

Query: 5   KSDFLSILSERGFIHQISNPR---ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             + L  L ER  I  +       E+  L ++     Y G+D TA SLH G+L  ++ L 
Sbjct: 34  NRNVLK-LYERQIIQNMFPDNSSNEIIDLLTKRNQCVYAGFDPTADSLHIGNLLVIINLL 92

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS--------SF 113
             Q+  HK I+L+GG T+ IGDPS + + R    SQ +  NI+ I              F
Sbjct: 93  HWQRANHKVIALIGGATAQIGDPSGKSKDRDKQSSQMLSHNIKGITHSLQSIFDNHAKYF 152

Query: 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
            K      + +++NN  W   I  ID +  IG  F +  MLS +SV+SRL     +SF E
Sbjct: 153 WKQKDPLPEPIIINNMEWYKGIGVIDFMNNIGRHFRMGTMLSRDSVKSRLS-GSGMSFTE 211

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F Y   QAYD++ L KNY C  Q+GG+DQ GNI+ G +L  R +  K++ LT PL+TT S
Sbjct: 212 FTYQTFQAYDWLHLFKNYKCLFQIGGNDQMGNIMSGQELISRQENAKVYGLTVPLITTDS 271

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG- 292
           G K GK+   AIWLN + TSP+  +Q+     DADV    K  T L + EI  + +    
Sbjct: 272 GDKYGKSAQNAIWLNSDRTSPFELYQFMIRTIDADVEKLLKMFTFLSLPEIAELMRRHKA 331

Query: 293 -KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SI 341
             +     + +A ++TT+VHG E  ++A  A    +D SI +    ++          ++
Sbjct: 332 TPDKRIPHESLARQVTTLVHGEEGLKEAIVATSALYDNSIETLSTLSVNDILKIFNGATV 391

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTG 400
            +  +  G+ +L + + A    +  +A R + +    IN+  I+N    + L        
Sbjct: 392 VELMLEPGITVLKMAMNAKCFLTDKDAYRIISAGGFYINHQRITNIDEIVTLSVHILPNN 451

Query: 401 NIKLSFGKKNHIICHLC 417
              +  GK+N+ I    
Sbjct: 452 ISLVRVGKRNYWIVKWI 468


>gi|218294915|ref|ZP_03495769.1| tyrosyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244823|gb|EED11347.1| tyrosyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 433

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 96/434 (22%), Positives = 169/434 (38%), Gaps = 42/434 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    I     L+ L     +T  +G D T   LH GH   L  +   Q+ GH+ +
Sbjct: 14  LLKRGAEEIIPEEELLEKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHRVV 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T +IGDPS R ++R  +  +E +EN           ++         +  N  W
Sbjct: 74  LIIGDFTGMIGDPSGRSKTRPPLTLEETRENARTYVEQAGKILRQEPEL--FELRYNSEW 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + + +++R      +V +ML  E  + R +    +S  EF Y   QAYD V +    
Sbjct: 132 LEGLTFKEVVRLTSLM-TVAQMLEREDFKKRYQEGIPISLHEFLYPFAQAYDSVAIR--- 187

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              ++MGG+DQ  N++ G ++              PLL       KM K+L   I + + 
Sbjct: 188 -ADVEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGQEKMSKSLDNYIGVAEP 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN----------EAKK 300
              P   ++    + D  +  + + LT L   EI+ + K      +           A+ 
Sbjct: 247 ---PEVMFKKLMRVPDPLLEDYFRLLTDLEEEEIEALLKAGPVPAHRVLARILTAAYARP 303

Query: 301 IIATEITTMVHGR---------------EEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
            I   I    +                  E  + A A  +        + +P + I   E
Sbjct: 304 QIPPRIDRAFYESLGYRLEALGRDKEAGPEEVRRAEARYDEVAKGGIPEEIPEVEIPASE 363

Query: 346 VSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G + +  L   AG   S  EARR +++  ++++  ++ +  L++ L        + L
Sbjct: 364 LREGRIWVARLFTLAGLTPSNAEARRLIQNRGLRMDGEVVEDPNLEVDLS-----RPLVL 418

Query: 405 SFGKKNHIICHLCG 418
             GK   +   L G
Sbjct: 419 QRGKDRFVRVRLQG 432


>gi|159900216|ref|YP_001546463.1| tyrosyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893255|gb|ABX06335.1| tyrosyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 393

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 171/413 (41%), Gaps = 27/413 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  +  RG    I        L +   +   +G D T S +H GH   L  +   Q+ GH
Sbjct: 4   IDEILSRGVSEVIVEANVRRKLNAGKPLRLKLGIDPTRSDIHIGHAVALRKMRQFQELGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDP+ RDESR  +  +E + N +         I          +   
Sbjct: 64  TVVLIVGDWTAQIGDPTGRDESRPRLTVEETKSNAKYYMDQVFKVIDPA----KTEVRWQ 119

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W            IG  F+VN+ML+ E+ R R +  Q L+ LE  Y +LQAYD + + 
Sbjct: 120 SEWFGQFDLEKAFGLIGR-FTVNQMLAHETFRKRYEAGQQLTVLELMYPMLQAYDSIAIK 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            +    ++ GG+DQ  NI+ G  L E++       +  PL+    G KM K+ + ++ + 
Sbjct: 179 PD----IEFGGTDQKFNILAGRQLMEQMGMESQDVILVPLIIGTDGRKMSKSFNNSVDI- 233

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATE 305
             + SP + +    ++ D  +  + +  +  P++E+       K       + K  +A +
Sbjct: 234 --LMSPNDKYGKIMSMGDDVLPVYYEVWSDAPLAEVKAMSEAIKAGSVNPRDLKMQLARD 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I   + G   A +A    +  F        MP +++S+        ++ L+V    A S 
Sbjct: 292 IIRQLDGEAAAAEAEAEFIRVFQQRDLPTDMPEVALSEA-----ANIVDLLVSTKLAASK 346

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            EARR +    +++    IS+    ++       G   L  G++      L G
Sbjct: 347 GEARRLIDGGGVRLAGEKISSYDSLVQPV-----GEQILQVGRRKF--VKLLG 392


>gi|269215911|ref|ZP_06159765.1| tyrosine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130170|gb|EEZ61248.1| tyrosine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 405

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 99/404 (24%), Positives = 168/404 (41%), Gaps = 20/404 (4%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    +  P  L+ L     +   +G D TA  +H GH   L  L   Q  GH+   ++G
Sbjct: 16  GADKVVPEPLLLEKLKKGVSLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHRVTLIIG 75

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
            GT++IGDPS R+ +R  +  ++I EN           +          +  N  W+ S+
Sbjct: 76  DGTALIGDPSGRNATRPQLSPEKIAENARTYVDQAFKILDPD----RTALRYNSEWILSL 131

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
           + +  L ++ S F+V R+L  +    R    + ++  EF Y ++QAYD V +       +
Sbjct: 132 E-MADLLKLLSNFTVARILERDDFHKRYTEGRPIALHEFMYPVMQAYDSVVI----GADV 186

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSP 254
           ++GGSDQ  N++ G +L E++      ALT PLL  T    KM K+    I L      P
Sbjct: 187 EIGGSDQLFNLLAGRELMEKMGMEPQVALTLPLLEGTDGVQKMSKSYGNYIGLT---DEP 243

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVH 311
            + +    +I D  +V + +  +T  +  ID + +         N  K+ +   I    +
Sbjct: 244 NDMFGKVMSIPDELMVKYYQLASTEDVDAIDGIERGLAAGELHPNAVKRALGRNIVAAYY 303

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
             E A  A       F      +  P + +S +    G +    L+V+A  A S +EARR
Sbjct: 304 DAEAARAAEADFDLKFKKHGFPEDAPVVEVSLEPNEEGTVYFAKLLVEAKAAGSVSEARR 363

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +    +KI    ++ +   +            +  GKK     
Sbjct: 364 LIDGGGVKIGGVALAPKSYSLDPSLLAHAE---IQVGKKKFFRL 404


>gi|218665375|ref|YP_002427447.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517588|gb|ACK78174.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 407

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 96/422 (22%), Positives = 171/422 (40%), Gaps = 29/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQ 56
           M     D    ++  G +  +     L  L         +   +G D TA  LH GH   
Sbjct: 1   MTMKHQDAFEQIAF-GTVDMLPEGEMLARLAAAQRDNRPLRIKLGMDPTAPDLHLGHTVL 59

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L      Q  GH+ + ++G  T++IGDP+ +  +R+ +  +E+  N    +      +  
Sbjct: 60  LHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTRKALSREEVVANAATYRRQVFKILDP 119

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   ++ N  WL +++  + L +I + ++V RML  +    R    Q ++  EF Y
Sbjct: 120 ----ERTEVMFNSEWLGALRP-EELIQIAACYTVARMLERDDFNKRYSANQPIAIHEFLY 174

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT 235
            +LQ YD V +       +++GG+DQ  N++ G +L           LT P+L       
Sbjct: 175 PLLQGYDSVAIK----ADVELGGTDQRFNLLVGRELQREYGQKPQLVLTMPILEGLDGVQ 230

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQG 292
           KM K+L            P   +    +I D  +  +   L+ +P  E     + A    
Sbjct: 231 KMSKSLGN---FIAVEDPPAEMFGKIMSISDFLMWRYYALLSRVPAVEQTRLQKEAASGA 287

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           +   + K  +A E+    HG   A++A  A +  F      + +P  +I   E  R   L
Sbjct: 288 RNPRDIKLDLAGELVRRFHGTAAAQEAHIAFLARFQRHETPEDLPLQAIKLSEAPR---L 344

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+V+   A ST+EA R +K  A++++   + +    + L          L FGK++  
Sbjct: 345 SQLLVQVHLAASTSEAMRKMKEGAVRVDGERVVDPATILAL-----DAVYLLQFGKRHFA 399

Query: 413 IC 414
             
Sbjct: 400 RV 401


>gi|218438278|ref|YP_002376607.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218171006|gb|ACK69739.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 406

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 180/424 (42%), Gaps = 30/424 (7%)

Query: 5   KSDFLSILSE--RGFIHQISN-------PRELDILCSQ--GVVTAYIGYDLTASSLHAGH 53
            ++    L+   RG      N          L  L ++    +   +G D T S +H GH
Sbjct: 1   MTNQPETLNWLDRGTSEIFPNQPQSKNPEENLTQLLAKSDRPLRIKLGIDPTGSEIHLGH 60

Query: 54  LTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF 113
                 L   Q  GH  + ++G  T+ IGDP+ + E R+ +  Q+++ N E         
Sbjct: 61  SIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTPQQVKSNAEDYLNQLRPI 120

Query: 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
           + + T      +  N  WL  +   D+L+ +G+  +V +ML+ E    R ++E  +   E
Sbjct: 121 LDFDTP-GRLEIRYNSEWLSQLNLSDILQLLGTM-TVGQMLAKEGFAQRYEQENPIYLHE 178

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTA 232
           F Y ++Q YD V +    D  +++GG+DQ  NI  G DL         F  L   LL T 
Sbjct: 179 FLYPLMQGYDSVAI----DADVELGGTDQKFNIAVGRDLQRFFGKKPQFGLLLPLLLGTD 234

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
              KM K+L+  + L ++  S Y+         DA +  + + LT LP+ +I        
Sbjct: 235 GVQKMSKSLNNYVGLREDALSMYS---KLEKTPDAVIKDYFELLTNLPLDQI-------P 284

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
               +A+K++A E+ +  HG E A+ A  AA +       +        S  E+     L
Sbjct: 285 SNPRDAQKLLALEVVSQFHGVEAAKSAQKAAQDLVQGGSTASADAVPEFSLSEIEFPAKL 344

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             ++  +G  +S+ E RR ++  A++++   I+   L  +  +        L  GKK  +
Sbjct: 345 FYILNASGLCSSSGEGRRQIQGGAVRLDGDRITEVDLTFESPEDLKDK--VLQVGKKKFV 402

Query: 413 ICHL 416
              L
Sbjct: 403 RLVL 406


>gi|156545533|ref|XP_001607236.1| PREDICTED: similar to GA14214-PA [Nasonia vitripennis]
          Length = 438

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 133/409 (32%), Positives = 206/409 (50%), Gaps = 23/409 (5%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L +Q     Y G+D TA SLH G+L  LM L   Q+ GH+ I+++GG T +IGDPS R  
Sbjct: 17  LVNQNPQCVYAGFDPTADSLHIGNLLVLMNLLHWQRGGHQVIAVVGGATGLIGDPSHRTN 76

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYG---------TGKTDALMLNNETWLCSIKYIDL 140
            R  +    +  NI  IK    +  +                  ++NN +W   +  +D 
Sbjct: 77  ERVALDQDVLNSNITSIKKNIVTLFENHEKYFWKDKQYPLPPIKIINNLSWYKDVNILDF 136

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           +R+IG  F +  ML   SV+SRLK E  +SF EF Y I QAYD+++L   Y+CR Q+GGS
Sbjct: 137 IRDIGKHFRMGTMLGRTSVQSRLKSETGMSFTEFTYQIFQAYDWLQLLNKYNCRFQIGGS 196

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           DQ GNI+ G +L  R     +F  T PL+T   G K GK+L  AIWL+ + +S +  +QY
Sbjct: 197 DQMGNIMAGHELISRTARLNVFGFTLPLITAEGGKKFGKSLGNAIWLSPKRSSSFQMYQY 256

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMVHGREEAEK 318
           +    DADV ++ K  T LP+++I+++     +  E  +A++I+A  +T +VHG E  + 
Sbjct: 257 FIRTTDADVENYLKLFTFLPLNQINQIMVEHRQSPENRKAQQILAENVTLLVHGDEALQA 316

Query: 319 AATAAMECFDMSIHSQHMPTIS-----------ISKDEVSRGMGLLTLIVKAGFATSTNE 367
           A  A +  +D SI S  + +             +        M    L +KA    S ++
Sbjct: 317 AKNATLLLYDKSIESLSIMSQEQIAAAFEGANIVDIVPDDSNMTAFDLAMKAKCFKSESD 376

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI-KLSFGKKNHIICH 415
           A R +K+ A  IN   +++   +IK         I  +  GK+ + +  
Sbjct: 377 AVRLIKAGAFYINYKRVTDLDEKIKFGKHILPNYITLIRTGKRTYHLVR 425


>gi|16329759|ref|NP_440487.1| tyrosyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501076|sp|P73141|SYY_SYNY3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1652244|dbj|BAA17167.1| tyrosyl tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 404

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 167/410 (40%), Gaps = 27/410 (6%)

Query: 14  ERGFIHQIS-------NPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            RG                 L IL  Q   +   +G D T + +H GH      L   Q 
Sbjct: 11  WRGTAEIFPHNADSNNPQEHLGILTQQDRPLRVKLGIDPTGTDIHLGHSIPFRKLRAFQD 70

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  + ++G  T+ IGDP+ + E R+ + + +++ N E         + + T      +
Sbjct: 71  AGHTAVVIIGDFTAQIGDPTGKSEVRKQLTADQVKRNAESYLAQLKPILDFDTP-GRLEI 129

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL ++    +L  + +  +V +ML+ E    R ++E  +   EF Y ++Q YD V
Sbjct: 130 RYNSEWLSNLDLNKILELLATM-TVGQMLAKEGFAERFQKENPIFLHEFLYPLMQGYDSV 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGA 244
            +    +  +++GG+DQ  NI  G DL         F L  P+L  T    KM K+L+  
Sbjct: 189 AV----NADVELGGTDQKFNIAVGRDLQRHFGKTPQFGLLLPILLGTDGQQKMSKSLNNY 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L ++  S Y+         D  +  + + LT L ++E+            E +K++A 
Sbjct: 245 VGLQEDALSMYS---KLEKTPDRLLGEYFELLTNLDLAELPE-------NPRECQKLLAK 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T   HG   A  A   A +                S  E++  + L  L+  +G   S
Sbjct: 295 EVTAQFHGVAGAIAAQKTAEDIVTQGKAGNTDSVPEFSLAEITFPVKLAYLLSASGLCPS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++E RR +K  A++++   + +   +             L  GKK  I  
Sbjct: 355 SSEGRRQIKGGAVRLDGDRLEDVNQEYADPKMLINK--VLQMGKKKFIRL 402


>gi|332030429|gb|EGI70117.1| Putative tyrosyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 426

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 130/416 (31%), Positives = 204/416 (49%), Gaps = 22/416 (5%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           ++  E+  L ++     Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +I
Sbjct: 9   TSTNEIVNLLNKSSQCVYAGFDPTADSLHIGNLLILMNLLHWQRAGHQVIALVGGATGLI 68

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK---------TDALMLNNETWL 132
           GDPS R   R  +    I+ENI+ I     +                    +++NN  W 
Sbjct: 69  GDPSHRKSERIEIERYVIEENIKSITKNVETIFNNHRYYFWKNKETALKPLIIVNNLDWY 128

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            ++  I+ ++ IG +F +  ML   SV++RL  E  +SF EF Y + QAYD+++L KNY 
Sbjct: 129 TNVNVIEFIKNIGKYFRMGTMLGRSSVQTRLNSEIGMSFTEFTYQVFQAYDWLQLMKNYK 188

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           CR Q+GGSDQ GNI+ G DL  +    +++ +T PL+T   G K GK+L  A+WL+   +
Sbjct: 189 CRFQIGGSDQMGNIMSGYDLITKSMRKEVYGITLPLITAEGGKKFGKSLLNAVWLSPIKS 248

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMV 310
           S +  +QY+    D+DV  F K  T +P++ I  + K      E  +A+K++A ++T +V
Sbjct: 249 SSFQLYQYFIRAKDSDVEKFLKLFTFIPLNTITEIVKNHMNDPEQRKAQKLLAEQVTLLV 308

Query: 311 HGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGLLTLIVKAG 360
           HG E    A  A+   +D SI           +      +I       G+ +  L  K  
Sbjct: 309 HGEEGLLAAKRASAALYDKSIESFIKLNASELTDVFEGATIVDVLSEPGITVYELAKKVK 368

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
              + ++A R + +    +N   I+N    I       S     L  GKK + I  
Sbjct: 369 CFKTDHDAERIITAGGFYVNYQKITNLNEIIVPGIHILSNNVSLLRVGKKTYHIVR 424


>gi|305433122|ref|ZP_07402278.1| tyrosine--tRNA ligase [Campylobacter coli JV20]
 gi|304443823|gb|EFM36480.1| tyrosine--tRNA ligase [Campylobacter coli JV20]
          Length = 401

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/421 (25%), Positives = 179/421 (42%), Gaps = 35/421 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
            + L+ +  RG   +I +   ++ L               G+D TA  LH GH   L  +
Sbjct: 4   KNILAEIK-RGC-AEIIDEERIENLIKNYYEKGENFFVKAGFDPTAPDLHLGHSVVLTKM 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            +LQK G     L+G  T  IGDPS +  +R+ +  +++ +N +  +      +      
Sbjct: 62  AYLQKHGAIVQFLIGDFTGQIGDPSGKSVTRKKLDKEQVLQNAKTYEEQVFKILDPQ--- 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++  + S FSV RML  +    R K +  +S  EF Y +LQ
Sbjct: 119 -KTQLKFNSQWLNELGATGIVE-LTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLLQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKMG 238
            YD V L     C ++MGG+DQ  N++ G  L        +   +  PLL       KM 
Sbjct: 177 GYDSVALK----CDIEMGGTDQKFNLLMGRTLQRIYNIGKEQAVMMMPLLEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EI 295
           K+L   I + ++    Y       +I D  +  + + L+T  + EI+ M K         
Sbjct: 233 KSLGNYIGVTEKANDMYA---KILSISDELMWRYYELLSTKSLEEIENMKKEISSGNLHP 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             AK+ +A EITT  H  E A+ A          +          I + E+   + L   
Sbjct: 290 KLAKENLALEITTRFHNEESAKAAKAEFDSVHSGNALPSD-----IKEFEIEGEIWLAKA 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G   ST+ ARR + +NA+ +N+  +S+E++Q+       TG   L  GK+      
Sbjct: 345 LVECGLENSTSAARRSINANAVSVNSQKVSDEQMQL------GTGEYILQVGKRKFAKLK 398

Query: 416 L 416
           +
Sbjct: 399 V 399


>gi|322437050|ref|YP_004219262.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164777|gb|ADW70482.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 424

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 102/441 (23%), Positives = 179/441 (40%), Gaps = 43/441 (9%)

Query: 1   MPAFKSDFLSI---LSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAG 52
           M   +   +     L  +G   +I    +L         S   +    G+D TA  LH G
Sbjct: 1   MSDSRFAPVEDQLALLTKGA-AEIIPLDDLRTRLEASLKSGKPLRVKAGFDPTAPDLHLG 59

Query: 53  HLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS 112
           H   +  L   Q+ GH  I L+G  T++IGDP+ + ++R+ +   EI  N E  K     
Sbjct: 60  HTVLMRKLRHFQQLGHTVIFLIGDSTALIGDPTGKSQTRKQLTQAEIDANAETYKQQVFR 119

Query: 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
            +     ++   +  N  WL  + + D++  + +  +V++ML  E    R   E+ +S  
Sbjct: 120 ILD----ESKTEVRYNSEWLAKLGFADMI-RLAAKATVSQMLEREDFHQRFNNEEPISLH 174

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT- 231
           E  Y + Q YD V L    +C +++GG+DQ  N++ G  L           L +P+L   
Sbjct: 175 ELLYPLAQGYDSVAL----ECDVELGGTDQKFNLLMGRRLQRDAGQLPQIVLMTPILEGL 230

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT---LPMSEIDRMA 288
               KM K+L  A+ +     SP++ +     I DA +  +   LT      ++ I+   
Sbjct: 231 DGVQKMSKSLGNAVGVE---DSPFDMFTKLMTIPDALIGRYFTFLTDLLPAQIAVIEEQI 287

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
                   +AK+ +A  I    H  E A  A     + F     S  +  + I++ E++ 
Sbjct: 288 VAGQLHPMQAKRDLARTIVEGFHTLEVAAHAEENWSKQFQQGGVSDDIEEVGITQAEIAG 347

Query: 349 G-------------MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                         + L  L+V  G   S +EA R L+  A+KI+  +  +  +Q+    
Sbjct: 348 PEAHNAQDGVTGFTIKLPPLLVHCGLCPSNSEATRKLREGAVKIDGEVQKDAVMQLAS-- 405

Query: 396 FDSTGNIKLSFGKK-NHIICH 415
                 + +  GKK    +  
Sbjct: 406 --LPVTLTIRLGKKAKRAVIT 424


>gi|307637465|gb|ADN79915.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996055|gb|ADZ51460.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325997650|gb|ADZ49858.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 402

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/426 (23%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISVALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QRH----TEVCFNSTWL-DTLGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILH 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +     F       +  GKK 
Sbjct: 342 GVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|323306996|gb|EGA60280.1| Msy1p [Saccharomyces cerevisiae FostersO]
          Length = 492

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 132/438 (30%), Positives = 200/438 (45%), Gaps = 31/438 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q++ P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVTQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------- 116
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K         
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICH 415
               + L  GK+   I  
Sbjct: 473 DDRVLILRIGKQKCFIIE 490


>gi|262371199|ref|ZP_06064520.1| tyrosyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313929|gb|EEY94975.1| tyrosyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 410

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 174/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH    L+G  T++IGDP+ +  +R  +  +++ EN +  +      +     
Sbjct: 67  LKTFQDLGHDVTFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFAEKTAADLI-QLASQQTVARMLERDDFTKRYNNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYDQEAQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEIN 296
           K+L   I +     +P   +Q   ++ DA +  +   L+   + +I        +G+   
Sbjct: 238 KSLGNYIGVF---DAPGAMYQKVLSMPDALIERYFDLLSFKSVEDIKVLLKEIAEGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E KKI+A E+    HG E AE A   A          +  P ++IS+ E    + + T++
Sbjct: 295 EVKKILALELVERFHGAEAAENAHKGAGNLITEGELPEGTPEVTISRAEFGGELFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ +++ +    +K         + +  GKK      
Sbjct: 355 RVAGLNPNAAAAKDAVGRGAVKVDWNVV-DMSFSVKE-----NVTLIIQSGKKAIAKVT 407


>gi|57167617|ref|ZP_00366757.1| tyrosyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020739|gb|EAL57403.1| tyrosyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 401

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/421 (25%), Positives = 177/421 (42%), Gaps = 35/421 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
            + L+ +  RG   +I +   ++ L               G+D TA  LH GH   L  +
Sbjct: 4   KNILAEIK-RGC-AEIIDEERIENLIKNYYEKGENFFVKAGFDPTAPDLHLGHSVVLTKM 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            +LQK G     L+G  T  IGDPS +  +R+ +  +++ +N +  +      +      
Sbjct: 62  AYLQKHGAIVQFLIGDFTGQIGDPSGKSVTRKKLDKEQVLQNAKTYEEQVFKILDPQ--- 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++  + S FSV RML  +    R K +  +S  EF Y +LQ
Sbjct: 119 -KTQLKFNSQWLNELGATGIVE-LTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLLQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKMG 238
            YD V L     C ++MGG+DQ  N++ G  L        +   +  PLL       KM 
Sbjct: 177 GYDSVALK----CDIEMGGTDQKFNLLMGRTLQRIYNIGKEQVVMMMPLLEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EI 295
           K+L   I + ++    Y       +I D  +  + + L+T  + EI+ M K         
Sbjct: 233 KSLGNYIGVTEKANDMYA---KILSISDELMWRYYELLSTKSLEEIENMKKEISSGNLHP 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             AK+ +A EITT  H  E A+ A          +     +    I        + L   
Sbjct: 290 KLAKENLALEITTRFHNEESAKAAKAEFDSVHSGNALPSDIKEFKI-----EGEIWLAKA 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G   ST+ ARR + +NA+ +N+  +S+E++Q+       TG   L  GK+      
Sbjct: 345 LVECGLENSTSAARRSINANAVSVNSQKVSDEQMQL------GTGEYILQVGKRKFAKLK 398

Query: 416 L 416
           +
Sbjct: 399 V 399


>gi|317010991|gb|ADU84738.1| tyrosyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 402

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 190/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKVSIALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGVVELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKLMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++    +P I +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAIKAKEQFSKVFSANL----LPEI-LSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   ++IN  +I NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVRINQEVIKNESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|317009215|gb|ADU79795.1| tyrosyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 402

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 189/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKVSIALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DTLGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++    +P I +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAFKAKEQFSKVFSANL----LPEI-LSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  +I NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKNESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|152990508|ref|YP_001356230.1| tyrosyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422369|dbj|BAF69873.1| tyrosyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 399

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 178/420 (42%), Gaps = 29/420 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLM 58
              + L+ +S RG   +I +   ++ L  +            G+D TA  LH GH   L 
Sbjct: 1   MLKEALAEIS-RGT-AEIIDQERIETLLKEYIEHGKNYYVKAGFDPTAPDLHLGHTVLLQ 58

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   QK G     ++G  T++IGDP+ + E+R+ +  + + +N +  K      +    
Sbjct: 59  KLATFQKYGGIVQFIIGDFTAMIGDPTGKSETRKKLDRETVLKNAQSYKDQVFKVLNPA- 117

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 ++ N +WL        L E+ + FSV RML  +    R K  + ++  EF Y +
Sbjct: 118 ---KTEVVFNSSWL-DALGASGLVELTTLFSVARMLERDDFEKRYKAGRPIAISEFIYPL 173

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTK 236
           LQ YD V L       +++GG+DQ  N++ G  L        +   L  P+L       K
Sbjct: 174 LQGYDSVHLK----SDIEIGGTDQKFNLLMGRHLQRSFGIGKEQAVLMMPILEGLDGVQK 229

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           M K+L   + + +    P   +    +I D  +  + + L++  + EI  +   +G E  
Sbjct: 230 MSKSLGNYVGVTE---EPNEMFAKLMSISDELMWRYYELLSSKSLEEIQTLK--EGVEKG 284

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E       E+  M       +  A  A +     +H ++     I + E+   + +   +
Sbjct: 285 EIHPKFVKELLAMEIVERYHDAEAAKAAKEEFDRVHKKNDIPTDIKEVEMQGPVWIAKAL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+AG   ST++ARR +++ A+++N   I+++   ++       G   +  GK+      +
Sbjct: 345 VEAGLEPSTSQARRDIQAGAVRVNKEKITDKDFHLQT------GEYIVQVGKRKFAKVKV 398


>gi|198284765|ref|YP_002221086.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198249286|gb|ACH84879.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
          Length = 405

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 167/407 (41%), Gaps = 28/407 (6%)

Query: 16  GFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           G +  +     L  L         +   +G D TA  LH GH   L      Q  GH+ +
Sbjct: 13  GTVDMLPEGEMLARLAAAQRDNRPLRIKLGMDPTAPDLHLGHTVLLHKARQFQDLGHRLL 72

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDP+ +  +R+ +  +E+  N    +      +          ++ N  W
Sbjct: 73  FVIGDFTAMIGDPTGKSVTRKALSREEVVANAATYRRQVFKILDP----ERTEVMFNSEW 128

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L +++  + L +I + ++V RML  +    R    Q ++  EF Y +LQ YD V +    
Sbjct: 129 LGALRP-EELIQIAACYTVARMLERDDFNKRYSANQPIAIHEFLYPLLQGYDSVAIK--- 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT P+L       KM K+L         
Sbjct: 185 -ADVELGGTDQRFNLLVGRELQREYGQKPQLVLTMPILEGLDGVQKMSKSLGN---FIAV 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEIT 307
              P   +    +I D  +  +   L+ +P  E     + A    +   + K  +A E+ 
Sbjct: 241 EDPPAEMFGKIMSISDFLMWRYYALLSRVPAVEQTRLQKEAASGARNPRDIKLDLAGELV 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG   A++A  A +  F      + +P  +I   E  R   L  L+V+   A ST+E
Sbjct: 301 RRFHGTAAAQEAHIAFLARFQRHETPEDLPLQAIKLSEAPR---LSQLLVQVHLAASTSE 357

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A R +K  A++++   + +    + L          L FGK++    
Sbjct: 358 AMRKMKEGAVRVDGERVVDPATILAL-----DAVYLLQFGKRHFARV 399


>gi|170078217|ref|YP_001734855.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169885886|gb|ACA99599.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 391

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 170/410 (41%), Gaps = 32/410 (7%)

Query: 12  LSE--RGFIHQISN--PRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           L    RG      +     L  +   G   +   +G D T S LH GH      L   Q 
Sbjct: 5   LEWLTRGTSEIFPDNPEENLAQVLQTGDRPLRVKLGVDPTGSDLHLGHSIPFRKLRAFQD 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  + ++G  T+ IGDP+ + E R+ + + ++Q+N E         + + T      +
Sbjct: 65  AGHTAVVIIGDFTAQIGDPTGKSEVRKQLSAADVQQNAETYLEQLRPILDFETP-GRLEI 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  +     ++ + +  +V +ML+ E    R + E  +   EF Y ++Q YD V
Sbjct: 124 RYNSEWLKDLDL-AKIQALLATMTVQQMLAKEGFAKRYQSENPIYIHEFLYPLMQGYDSV 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGA 244
            +    D  +++GG+DQ  NI  G DL         F L  P+L  T    KM K+L+  
Sbjct: 183 AV----DADVELGGTDQKFNIAVGRDLQRHFGKKPQFGLLLPILIGTDGKEKMSKSLNNY 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L     + Y   Q  +N  D+ +  + + LT        +  +       + +K++A 
Sbjct: 239 VGLKDNHHTMY---QKLQNTPDSLLKDYFELLT-------KQDLQTLPTNPRDQQKLLAR 288

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +I T  HG E A  A           + + ++P  S+   E      L  ++  +G  +S
Sbjct: 289 DIVTQFHGAEAAVDAEK-----AVQDVAAANIPEFSLGAVEFPS--PLFYILGASGLCSS 341

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             + RR +K  A+++++  I++  L  +  +        L  GKK  +  
Sbjct: 342 GGDGRRQIKGGAVRLDDERITDMNLAFEKPEQLVDK--VLRVGKKKFVRL 389


>gi|164687946|ref|ZP_02211974.1| hypothetical protein CLOBAR_01591 [Clostridium bartlettii DSM
           16795]
 gi|164602359|gb|EDQ95824.1| hypothetical protein CLOBAR_01591 [Clostridium bartlettii DSM
           16795]
          Length = 401

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 105/423 (24%), Positives = 183/423 (43%), Gaps = 32/423 (7%)

Query: 5   KSDFLSILS--ERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLM 58
                  L   ++G +  I+    +  L         +   +G D +A  +H GH   L 
Sbjct: 1   MKSLEEQLKIIKKGTLDIINEEELIKKLEKSIKENKPLKIKLGLDPSAPDIHLGHTVVLR 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L  LQ  GH+ I ++G  T  IGDP+ +   R+ +  +E+ +N +  +      +    
Sbjct: 61  KLKQLQDLGHEIIIIIGDFTGKIGDPTGKSRMRKFLSDEEVLQNAKTYEEQVFKILD--- 117

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            K    +  N  WL  + + D+L+   S  +V RML  E  + R + ++ +   EF Y +
Sbjct: 118 -KEKTTIKFNSEWLSKLTFGDVLKLTAS-TTVARMLEREDFKLRFENQRPIYLNEFFYPL 175

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKM 237
           +QA+D   +    +  ++ GG+DQ  N++ G +L + +       +  PL+       KM
Sbjct: 176 MQAFDSTAI----EADIEFGGTDQRFNLLSGRNLQKEIGEEPQVVIMMPLIEGLDGKNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKE 294
            KTL   I + +   S Y   Q    I D  +V +   LT +      E++   K +   
Sbjct: 232 SKTLGNYIGIYESAKSKY---QKVMEIPDELIVKYYTLLTDVDDEIIKEVEAKLKDESVN 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K  +A EI ++ H  EE E+A       F M    + + T+++SK++      L++
Sbjct: 289 PRDIKMDLAREIVSLYHTEEEVEQAEERFKMIFQMGQKPKDIDTVNVSKEDF----DLIS 344

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V  G  +S +E RR L    IKIN+  I+ EK      D    G I +  GKK  +  
Sbjct: 345 TVVDKGLVSSKSEFRRLLPQGGIKINDKKITMEK------DLPKEGEIVVQVGKKKFMKI 398

Query: 415 HLC 417
            + 
Sbjct: 399 IVS 401


>gi|109947217|ref|YP_664445.1| tyrosyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109714438|emb|CAJ99446.1| tyrS [Helicobacter acinonychis str. Sheeba]
          Length = 402

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/426 (23%), Positives = 191/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGT-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +   ++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNQDQVLENAQTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL S+     + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWLDSLGT-KGMVELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKLMSVSDDLMWRYYTLLSDKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI T  +G ++A KA     + F  ++  ++     +S+     G+
Sbjct: 287 QTLHPKAVKEDLASEIVTRYYGEDQANKAKEQFSKVFSANLLPEN-----LSESAFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   ++I+  ++ +E  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVRIDQEVVKDESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|222823624|ref|YP_002575198.1| tyrosyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538846|gb|ACM63947.1| tyrosyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 400

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 176/422 (41%), Gaps = 35/422 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
           ++ +  +  RG I +I +   L  L               G+D TA+ LH GH   L  +
Sbjct: 4   NEIIKEIK-RG-IAEIIDEERLVSLVKNYYEKGENFFVKAGFDPTAADLHLGHTVVLSKM 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK G     L+G  T+ IGDP+ +  +R+ +  +E+ +N +  +      +      
Sbjct: 62  ALLQKHGAIVQFLIGDFTAQIGDPTGKSVTRKKLDKEEVLKNAKTYEEQVFKILDP---- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   +  N  WL  +     + E+ S FSV RML  +    R K +  +S  EF Y +LQ
Sbjct: 118 SKTQIHFNSKWLNELGA-AGIVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLLQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTPKLFALTSPLLTT-ASGTKMG 238
            YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM 
Sbjct: 177 GYDSVVLK----SDIEMGGTDQKFNLLMGRQLQRVYNCQKEQAVMMMPLLEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEI 295
           K+L   I + ++    Y       +I D  +  + + L+   ++E   I    K      
Sbjct: 233 KSLGNYIGVTEDAKDMYAKV---LSISDELMFRYYELLSEKSLNEISQIKDDIKNGSLHP 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            +AK+ +A EIT   H  E A KA     +          MP+ ++        + L   
Sbjct: 290 KKAKENLALEITARFHSNECALKAKEEFDKVHSAKELPSDMPSFTL-----EGSIWLAKA 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           IV+    +ST+ ARR + SNA+ +N   + +E+ Q++       G   L  GK+      
Sbjct: 345 IVECKMESSTSAARRLINSNAVSVNGEKVQDEQFQLES------GEYILQVGKRKFAKLK 398

Query: 416 LC 417
           + 
Sbjct: 399 VI 400


>gi|154250390|ref|YP_001411215.1| tyrosyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154154326|gb|ABS61558.1| tyrosyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 398

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 174/410 (42%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL +   +  +S    L+ L     +   +G D +   LH GH   L  L   Q  GH
Sbjct: 9   IKILKK-NCVDLVSEEELLERLKEGKPLRVKLGVDPSRPDLHLGHAVVLKKLKQFQDLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I ++G  T++IGDPS R+ +R M+  +E+ EN +         +     K   ++  N
Sbjct: 68  QVILIIGDFTAMIGDPSGRNTTRPMLSREEVVENAKSYAEQAFMILD----KEKTIIRYN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ + D+++  G + +V RML  E    R      +S  EF Y + QAYD V + 
Sbjct: 124 NEWLGAMTFADVVKLAGKY-TVARMLEREDFAKRYAEGTPISVAEFLYPLAQAYDSVAIQ 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWL 247
                 +++GG+DQ  N++ G  + E         +T P++  T    KM K+ +  I  
Sbjct: 183 ----ADVELGGTDQLFNLMVGRKIQEEYGLRPQIVMTMPIIEGTDGKLKMSKSYNNYIGF 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKKIIAT 304
                 P + +    +I D  +V +AK LT +      ++++    +     + K  +A 
Sbjct: 239 T---DEPRDMYGKVMSIPDELIVKYAKLLTDVDDEVLRKMEKEINEKAVNPRDYKMWLAK 295

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    HG E+A+ A    +  F      + MP + I          ++ L+       S
Sbjct: 296 EIVRQFHGEEKAKDAEEYFITVFQRKEIPEEMPEVKIQAGV----YNIVDLLETLKI-GS 350

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +E +R +    +  +N+ I N K  +++          L  GK+  I  
Sbjct: 351 RSEIKRLITQGGVYFDNNRIDNFKANVEIS-----KEHILRVGKRQFIKI 395


>gi|308182932|ref|YP_003927059.1| tyrosyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065117|gb|ADO07009.1| tyrosyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 402

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 102/426 (23%), Positives = 187/426 (43%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKVSTALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 EKH----TEVCFNSTWL-DALGAKGMIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAFKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|113474316|ref|YP_720377.1| tyrosyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110165364|gb|ABG49904.1| tyrosyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 405

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 98/389 (25%), Positives = 175/389 (44%), Gaps = 19/389 (4%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L +      +   +G D T   +H GH   +  L   Q  GH  + ++G  T+ +GDP+ 
Sbjct: 32  LKLTTLDRPLRVKLGIDPTGVDVHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARVGDPTG 91

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           + E+RR +  +++QEN +         + + T      +  N  WL  +   D+L  + +
Sbjct: 92  KSEARRQLTPEQVQENAKTYLDQVRPILDFDTP-GRLEIRYNSEWLSKLDLADILELLAT 150

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
             +V +ML+ E    R ++E  +   EF Y ++Q YD V +    D  +++GG+DQ  NI
Sbjct: 151 M-TVGQMLAKEGFALRYQQENPIYIHEFLYPLMQGYDSVAV----DADVELGGTDQKFNI 205

Query: 207 ICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
             G DL         F L  P+L  T    KM K+L   + L+++  S Y+       I 
Sbjct: 206 AVGRDLQRHFGKRTQFGLLMPILLGTDGVQKMSKSLGNYVGLSEDPLSMYS---KLEKIP 262

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           D  V ++ + LT L +++ID+          E +K++A +I +  H +E A +A   A++
Sbjct: 263 DDQVENYFELLTNLNINDIDK-------NPRERQKLLALDIVSQYHSQEAALEAQQTAVK 315

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                  SQ       S   V     L  ++  +G   S++EAR+ +   A+++++  IS
Sbjct: 316 MVIKGDMSQTEAVPEFSLASVEFPAKLFYVVSASGLCKSSSEARKKIAGGAVRLDDERIS 375

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++   +            L  GKKN +  
Sbjct: 376 DQNFTLDSPADLDGK--VLRVGKKNFVRL 402


>gi|6325160|ref|NP_015228.1| Msy1p [Saccharomyces cerevisiae S288c]
 gi|1351184|sp|P48527|SYYM_YEAST RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|825503|gb|AAA67122.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1151229|gb|AAB68202.1| Msy1p: encodes a mitochondrial tyrosyl-tRNA synthetase
           [Saccharomyces cerevisiae]
 gi|151942699|gb|EDN61045.1| mitochondrial tyrosyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190407858|gb|EDV11123.1| tyrosine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|285815443|tpg|DAA11335.1| TPA: Msy1p [Saccharomyces cerevisiae S288c]
          Length = 492

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 133/438 (30%), Positives = 200/438 (45%), Gaps = 31/438 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------- 116
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K         
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICH 415
               + L  GK+   I  
Sbjct: 473 DDRVLILRIGKQKCFIIE 490


>gi|207340573|gb|EDZ68882.1| YPL097Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 492

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 133/438 (30%), Positives = 200/438 (45%), Gaps = 31/438 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------- 116
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K         
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICH 415
               + L  GK+   I  
Sbjct: 473 DDRVLILRIGKQKCFIIE 490


>gi|217032180|ref|ZP_03437679.1| hypothetical protein HPB128_186g46 [Helicobacter pylori B128]
 gi|298736478|ref|YP_003729004.1| tyrosyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946170|gb|EEC24779.1| hypothetical protein HPB128_186g46 [Helicobacter pylori B128]
 gi|298355668|emb|CBI66540.1| tyrosyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 402

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 188/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDEKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DALGAKGMIELCAKFSVARMLERDDFAKRHKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+T  + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSTKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  ++A KA     + F  ++    +P I +S+ +   G+G+L ++ +
Sbjct: 295 KEKLAGEIVARYYDNDQAIKAKEQFSKVFSANL----LPEI-LSESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  +I +E  +     F       +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVIKDESYR-----FVKGNY-VIQLGKKRFMKLNI 401


>gi|297181132|gb|ADI17329.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0070_21F08]
          Length = 397

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 171/407 (42%), Gaps = 22/407 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I      + + S   +    G+D TA  LH GH   +  L   Q+ GH  +
Sbjct: 10  LLRRGADEIIQEDELRERIASGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQELGHHVM 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +  +EI+ N E  K      +          ++ N TW
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLTPEEIERNAETYKEQVFKILDP----EKTEVVFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +     + ++ S ++V RML  +    R +  Q ++  EF Y ++Q YD V +    
Sbjct: 126 MNQVGA-AGMIKLASQYTVARMLERDDFDKRYRANQPIAVHEFLYPLVQGYDSVAM---- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G  L +         LT P+L       KM K+L   + +N  
Sbjct: 181 EADVELGGTDQKFNLLMGRTLQKAYGQAPQICLTMPILEGLDGVQKMSKSLKNYVGVN-- 238

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS--EIDRMAKLQGKEINEAKKIIATEITT 308
             +P   ++   +I D     + + L+ L     E  +    +     EAKK  A E+ T
Sbjct: 239 -DAPGEMYRKLLSIPDDMTWRYYELLSGLSNEALEERKAEADRLGSPQEAKKAFALEMVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG   A+ A ++A     +     ++P + +  ++    + ++ L+  AG A +   A
Sbjct: 298 RFHGEAAAQAAPSSAGNLTSLGAIPDNVPEVEVVLEDGDE-VHVVPLLRLAGLAQNGKAA 356

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +      A+ ++   ++ E+       F    +  +  GKK      
Sbjct: 357 KYVFGRGAVYVDGQQLTEERT------FARGESAVIQAGKKKIARVT 397


>gi|148244298|ref|YP_001218992.1| tyrosyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326125|dbj|BAF61268.1| tyrosyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 394

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 176/408 (43%), Gaps = 26/408 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           +  RG    +      + L     +    G+D T   LH GH   +  L  LQ  GH+ +
Sbjct: 9   IFTRGTNEILPFHELKEKLKKDKPLRIKAGFDPTTPDLHLGHTVVINKLKQLQNLGHEIL 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T++IGDP+ + ++R  +  +++QEN +         +     K    ++ N  W
Sbjct: 69  FLIGDFTAMIGDPTGKSKTRPPLSKKQVQENAKSYTKQIFKILD----KNKTKVVFNFQW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +K I+ + ++ S  ++ R+L  +    R K  QS+S  EF Y ++Q  D VEL    
Sbjct: 125 MDKMKPIEFI-QLASKQTIARILERDDFSKRYKSGQSISTHEFLYPLIQGNDSVELQ--- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L ++    +   LT P+L       KM K+L   I +N  
Sbjct: 181 -SDVEVGGTDQKFNLLVGRELQKQAGQEQQVILTMPILEGLDGVQKMSKSLDNYIGINAL 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   +  I   +   +QGK   + K ++A EI T
Sbjct: 240 ---PDEMFGKIMSISDDLMWRYFELLSFQSLEAITNLKQTIVQGKNPRDIKFVLANEIVT 296

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             +  + A++A    +  F  +     M   S        G+ +  L+   G   ST+ A
Sbjct: 297 RFYKVDVAKEAQQNFINRFSKNQTPNKMNEFS-----FKAGIKIANLLKDTGLCFSTSNA 351

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + +K   +KINN  I+N+  +                GK+      +
Sbjct: 352 YQMIKQGGVKINNIKITNKNFEPPT------NTNVYQVGKRKFARVTI 393


>gi|270307963|ref|YP_003330021.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153855|gb|ACZ61693.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 396

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 101/415 (24%), Positives = 179/415 (43%), Gaps = 27/415 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    IL  RG    I       +L S   +    G+D ++  +H GH+  L  L
Sbjct: 1   MNQAENRIDQILK-RGVAEVIVEEDFKKLLLSGKKLRLKEGFDPSSPDIHLGHMVALRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++ N +     F   +      
Sbjct: 60  RQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVKANAKTYLEQFFKIVDKD--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +     W  + K  + +  + S F+V +ML+ +    R    + +S  E  Y +LQ
Sbjct: 117 -KTEVRWQSEWYANFKL-EDVVRLSSKFTVAQMLARDDFAKRYAAGKPISVTELLYPMLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGK 239
           AYD V +       ++ GG+DQ  N++ G +L E L       L  P+L  T    KM K
Sbjct: 175 AYDSVMVK----SDVEFGGTDQKFNLLVGRELQEMLGQKPQQVLMVPILVGTDGVHKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I + +    P   +    +I D  ++ + + +T +P +EI               
Sbjct: 231 SLGNYIGVAE---EPTEIFGKCMSIPDELILQYFELVTDIPATEIADFKNQMANGLINPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             KK +A E+ T ++    AE+A              + MP   +   E  + + ++  I
Sbjct: 288 VLKKRLARELITQLYSTAAAEEADAQFTRVVQRGEIPEDMPECRL---ENGKSICVIDFI 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +KA  A S +EARR L+   ++IN++ IS+    +K  D        +  GK+ +
Sbjct: 345 IKADLAKSKSEARRLLEQGGVEINSAKISDPGTTVKCGD-------IIKAGKRRY 392


>gi|323346192|gb|EGA80482.1| Msy1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 492

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 132/438 (30%), Positives = 199/438 (45%), Gaps = 31/438 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------- 116
             GH  ++++GG T  +GDPS R   R +M +     N+  I      F K         
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRHSNVASISQQLQRFFKNGLEYYRNR 174

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICH 415
               + L  GK+   I  
Sbjct: 473 DDRVLILRIGKQKCFIIE 490


>gi|323335043|gb|EGA76333.1| Msy1p [Saccharomyces cerevisiae Vin13]
 gi|323352016|gb|EGA84555.1| Msy1p [Saccharomyces cerevisiae VL3]
          Length = 492

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 132/438 (30%), Positives = 199/438 (45%), Gaps = 31/438 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------- 116
             GH  ++++GG T  +GDPS R   R +M +     N+  I      F K         
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRXSNVASISQQLQRFFKNGLEYYRNR 174

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICH 415
               + L  GK+   I  
Sbjct: 473 DDRVLILRIGKQKCFIIE 490


>gi|256274193|gb|EEU09101.1| Msy1p [Saccharomyces cerevisiae JAY291]
          Length = 492

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 133/438 (30%), Positives = 200/438 (45%), Gaps = 31/438 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------- 116
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K         
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICH 415
               + L  GK+   I  
Sbjct: 473 DDRVLILRIGKQKCFIIE 490


>gi|308184559|ref|YP_003928692.1| tyrosyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060479|gb|ADO02375.1| tyrosyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 402

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 184/423 (43%), Gaps = 29/423 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QQH----TEVCFNSTWL-DALGTKGMIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           +    K  +  E+   +  R      A  A E F     +  +P I +S+ +   G+G+L
Sbjct: 287 QTLHPK-AVKEELAGEIVARYYNNDQAFKAKEQFSKVFSANLLPEI-LSESDFDEGVGIL 344

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++ + GF  ST++ARR ++   +KIN  +I NE  +     F       +  GKK  + 
Sbjct: 345 DVLKQIGFCPSTSQARRDIQGGGVKINQEVIKNESYR-----FVKGNY-VIQLGKKRFMK 398

Query: 414 CHL 416
            ++
Sbjct: 399 LNI 401


>gi|51892260|ref|YP_074951.1| tyrosyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81389194|sp|Q67QD6|SYY_SYMTH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51855949|dbj|BAD40107.1| tyrosyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 408

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 94/427 (22%), Positives = 177/427 (41%), Gaps = 31/427 (7%)

Query: 1   MP-AFKS--DFLSILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGH 53
           M  AF S  + + IL  RG +  +S       L     +   +   +G D T   L  GH
Sbjct: 1   MTMAFMSVDEQMKILM-RGVVDLVSEEELRQKLERSVKTGRPLRVKLGIDPTGKDLTLGH 59

Query: 54  LTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF 113
              L  L    + GH+ + ++G  T+++GDP+ R+E+R  +   E   N ++     +  
Sbjct: 60  TVPLRKLRDFVECGHQGVLIIGDYTAMVGDPTGRNEARPQLTHAETTANAQRYLEQAARV 119

Query: 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
           +      +   +  N  WL  + +   +  + +  +V RML  E  + R +  + +   E
Sbjct: 120 LD----VSKLEIRRNSEWLAPMSF-SDVIRLAAKSTVARMLEREDFKKRYEEGRPIFIHE 174

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-A 232
           F Y ++Q  D V +       +++GG+DQ  N++ G DL           L +P++    
Sbjct: 175 FFYPLMQGTDSVAVQ----ADVELGGTDQKFNLLAGRDLQRDAGQEPQVCLMTPIVEGLD 230

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
              KM K+L   I L+    +P   +    +I D+ ++++    T +P  EI+R+     
Sbjct: 231 GVQKMSKSLGNYIGLDH---TPDEMFGRTMSIPDSLIITYFTYFTDVPQEEIERIEAAMA 287

Query: 293 KEINEA---KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
              N     K++    ITT     EEA  A    +  F      + +P + +   E+   
Sbjct: 288 AGENPMTFKKQLGRAIITTYGGTEEEARLAEERWVAQFSRGEVPEDIPDVVLPAAEL--P 345

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M    ++  AG A S +EARR ++     ++   +++ + ++            L  GK+
Sbjct: 346 MQAARVLFTAGLAPSLSEARRLIEQGGFTVDGEKVTDPRAELA---LRPGQ--VLKAGKR 400

Query: 410 NHIICHL 416
            +    L
Sbjct: 401 KYGRVVL 407


>gi|317012585|gb|ADU83193.1| tyrosyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 402

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 102/418 (24%), Positives = 188/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGA-NEIIGLEYIENLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDQKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DTLGTKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+   + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A+EI    +  ++A KA     + F  ++    +P I +S+ +   G+G+L ++ +
Sbjct: 295 KEDLASEIVARYYDNDQAFKAKEQFSKVFSANL----LPEI-LSESDFDEGVGVLDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  +I +E  +     F       +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVIKDESYR-----FVKGNY-VIQLGKKRFMKLNI 401


>gi|162448028|ref|YP_001621160.1| tyrosyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083638|sp|A9NHF4|SYY_ACHLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|161986135|gb|ABX81784.1| tyrosyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 410

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 143/415 (34%), Positives = 216/415 (52%), Gaps = 15/415 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D    L  RG +  +S+      L ++  +  Y+GYD T  SL  GHL Q++ + +LQK 
Sbjct: 2   DLFKQLEYRGMVKDVSDLELAKQLLNEQKIKFYVGYDPTGESLTVGHLVQIVRMLYLQKH 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT +IGDP      R ++  ++  EN +KI+      IK      +   +
Sbjct: 62  GHTPVVLIGGGTGLIGDPRE-TSERSLLTLEKSLENAQKIENQIKGLIK-----GNVEFV 115

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  I  LR+ G  FSV+ ML  ++V+ RL  E  +S+ EF+YMILQ+ D++ 
Sbjct: 116 NNYEWLSKIDLISFLRDYGKHFSVSYMLHKDTVQKRL--ESGISYTEFSYMILQSIDWLN 173

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N D ++Q GGSDQWGN+  G++L  R+        L+SPLL  A GTK GK+ SGA+
Sbjct: 174 LYQNRDVKIQFGGSDQWGNLTSGLELIRRVLGKNDAVGLSSPLLLKADGTKFGKSESGAL 233

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+KE+TSPY  +QY+ N  D D+  F K LT +   EI+       +  E+  A+K++A
Sbjct: 234 WLDKELTSPYELYQYFLNSSDTDIEQFLKLLTLIEQDEIEAILETHREKPELRHAQKVLA 293

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS----RGMGLLTLIVKA 359
             +  +VHG+EE E A       F    +          +  +      G  L+ L+VK+
Sbjct: 294 KAVVELVHGKEELETALQVTEALFSGEFNGLTKSAYKTLESVIDVVRFNGESLIELVVKS 353

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A+S  EAR  + + AI I    I++    +            +  GKK + + 
Sbjct: 354 KLASSNREAREFISNGAISIQGEKITDSMYNVGETSKAFDTYAIIRRGKKKYALI 408


>gi|290973260|ref|XP_002669367.1| predicted protein [Naegleria gruberi]
 gi|284082913|gb|EFC36623.1| predicted protein [Naegleria gruberi]
          Length = 492

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 136/455 (29%), Positives = 215/455 (47%), Gaps = 44/455 (9%)

Query: 2   PAFKSDFLSILSERGFIHQISNP-RELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
            +  ++F+S L +RG  +  ++    L    +        +  Y G+D TAS LH G+L 
Sbjct: 39  SSNNNEFISDLKKRGIYNDATSGFDNLMQEMNSGSELAKSIGIYAGFDPTASGLHVGNLL 98

Query: 56  QLMLLFWLQKTGH----KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
            L  L   Q   +        L+GG T  IGDPS R   R ++    I  NIE +K    
Sbjct: 99  VLQTLKRFQLAFNPKNVHIYCLVGGATGRIGDPSGRKTERPLLDESTINNNIEGLK---R 155

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR----EQ 167
               + + K +  ++NN  WL  +K IDLLR +G +F +  ML  +SV+SR++       
Sbjct: 156 EMNSFFSSKNNVTVVNNADWLGEMKMIDLLRNVGKYFQIANMLRLDSVKSRVENADADNG 215

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-------KTPK 220
            ++F EF+Y + Q+YDF  L  + + RLQ+GGSDQWGNI  G++  ++            
Sbjct: 216 GMTFTEFSYSLFQSYDFFHLLNSNNVRLQIGGSDQWGNITSGLEFIKKKQTAMPESCQSV 275

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
              +T PLLTTA G K GK++  A+WLN EMTS ++F+QY+  + DADV    K LT + 
Sbjct: 276 CSGMTIPLLTTADGVKFGKSMGNAVWLNPEMTSVFDFYQYFLRVQDADVEKLLKMLTFVS 335

Query: 281 MSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           + +ID+      Q  E   A++ +A E+TT +HG+E+ EK        F  S        
Sbjct: 336 LEDIDQILQEHNQQPEKRIAQQRLAEELTTQIHGKEQLEKVQKCTNLLFGASSEEAIEIL 395

Query: 339 ISISKDEVSR----------------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            ++SK +++                    ++ + +      S +E  + +KS    IN  
Sbjct: 396 KTLSKKDITSLMKDSVGGQVPKEDLLSKPIIDIALALKLGPSKSELGKLIKSGGFYINYK 455

Query: 383 IISNEKLQIKLQDFD--STGNIKLSFGKKNHIICH 415
              + K  +   D    +     L  GKKN+ +  
Sbjct: 456 RQIDPKYVMTEADLVAGNGSIAVLRLGKKNYHLIE 490


>gi|323331216|gb|EGA72634.1| Msy1p [Saccharomyces cerevisiae AWRI796]
          Length = 503

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 133/438 (30%), Positives = 200/438 (45%), Gaps = 31/438 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------- 116
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K         
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICH 415
               + L  GK+   I  
Sbjct: 473 DDRVLILRIGKQKCFIIE 490


>gi|110597950|ref|ZP_01386231.1| tyrosyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340399|gb|EAT58888.1| tyrosyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 406

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 101/406 (24%), Positives = 171/406 (42%), Gaps = 26/406 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L   G + Q    + L  L +   +   +G D +   LH GH   L  L   Q  GH+ 
Sbjct: 19  ELISVGELEQ----KLLHSLKTGVPLKVKLGADPSRPDLHLGHSVVLRKLREFQDLGHEA 74

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I ++G  T++IGDPS + ++R  + ++E +EN E      S  +          +  N  
Sbjct: 75  ILIIGDFTAMIGDPSGKSKTRPQLSAKEARENGESYFEQASKILDPD----KTTICYNSD 130

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL ++K+ D++  + S ++V RML  +    R +  + +S  EF Y + Q  D V L  +
Sbjct: 131 WLGAMKFADII-RLSSHYTVARMLERDDFERRYRSNEPISIHEFLYPLAQGMDSVHLKND 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G DL      P    +T  LL  +    KM K+L  AI  N 
Sbjct: 190 ----IELGGTDQKFNLLVGRDLQREYGIPPQVCITMELLVGSDGKEKMSKSLGNAICFN- 244

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEINEAKKIIATEITT 308
               P   +    +I D  + ++ + L             + +  +   AK+ +A EI  
Sbjct: 245 --DPPSEMYGKVLSIPDPLIETWCRLLVPQTERAATSAILEQRETDPRSAKRALAREIVA 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             + R  A  A T   + F       H+           + + L+ L+V  G A S +EA
Sbjct: 303 SYYSRSAAADAETHFDQLFVHKKAPDHIELFLFE----EQSLPLIDLLVTLGAAPSKSEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR ++ N+I ++   IS    +I L          +  GK+     
Sbjct: 359 RRMIQQNSILVDERKISEIHEKIDLDIEPK----IIKAGKRRFFKV 400


>gi|325271186|ref|ZP_08137739.1| tyrosyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324103697|gb|EGC00991.1| tyrosyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 399

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 166/408 (40%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +  + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MDKLTPADFI-RLASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL       KM K+L   + + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   M EI++            + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P + +   E   G+ +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEVEVVSAE---GLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + A      +  +  +  K   F          GKK+     L
Sbjct: 355 RDLLSAGA------VKVDGVVVDKDFLFGLGATHVCQAGKKSFGRVTL 396


>gi|328944262|ref|ZP_08241726.1| tyrosine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491181|gb|EGF22956.1| tyrosine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 410

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 109/402 (27%), Positives = 174/402 (43%), Gaps = 21/402 (5%)

Query: 20  QISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI    EL    S Q  +T  +G D T+  LH GH   L  +   Q  GH  + ++G GT
Sbjct: 22  QIVPVDELKAKLSRQEPLTVKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVVLIIGNGT 81

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  +  + +++N           +          +++N  WL  +   
Sbjct: 82  ALIGDPSGRDSTRPPLTEEAVEKNAATYVEQAMKILDPQ----KTKIVHNGEWLKPLDLS 137

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  +   F+V R+L  E   +R    QS+S  EF Y +LQAYD V +       ++MG
Sbjct: 138 KMLGLMSK-FNVARILEREDFHNRYTNNQSISLHEFIYPVLQAYDSVVVH----ADVEMG 192

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL          ALT PLL  T    KM K+    + L     S  + 
Sbjct: 193 GNDQIFNLLAGRDLMRAEGMEPQVALTMPLLVGTDGTKKMSKSYGNYVGLT---DSADDM 249

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           +    +I D  + S+ +  +T  + EI   D   K +  +    K+ +A  I T+ HG  
Sbjct: 250 FGKLMSIPDELIASYYRLCSTFSLEEIDAVDEQFKNKTADPYALKRALAVNIVTLYHGEG 309

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHL 372
               A       F        +P  S S  +VS    + L  L+V    A +++EARR +
Sbjct: 310 AGLAAQNQFDAQFKHHEVPDDIPEFSTSLIDVSDDGMVYLAKLMVDCKLAPTSSEARRRI 369

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +KI+   ++ +   I  +   +     L FGK++    
Sbjct: 370 DGGGVKIDGKAVAPKSYNISHERLHAG--TVLQFGKRSWAKL 409


>gi|186684000|ref|YP_001867196.1| tyrosyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186466452|gb|ACC82253.1| tyrosyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 439

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 166/408 (40%), Gaps = 32/408 (7%)

Query: 15  RGFIHQI-----SNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           RG +         N   L+ L +     +   +G D T + +H GH   +  L   Q  G
Sbjct: 54  RGVVEVFPQPVDVNSESLEKLLTTTNKPLRIKLGIDPTGTDIHLGHSIPVRKLRAFQDAG 113

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  + ++G  T+ IGDP+ + E RR +   ++ +N +         + + T      +  
Sbjct: 114 HIAVLIIGDFTARIGDPTGKSEVRRQLTEADVAQNAQTYLDQVRPILDFDTP-GRLEVRY 172

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +    +L  + +  +V +ML+ E    R K+E  +   EF Y ++Q +D V +
Sbjct: 173 NSEWLSGLNLEKILELLSTM-TVGQMLAKEGFADRYKKENPIFIHEFLYPLMQGFDSVAV 231

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
               +  +++GG+DQ  NI  G DL         F +  P+L  T    KM K+L   I 
Sbjct: 232 ----EADVELGGTDQKFNIAVGRDLQRHFGQKPQFGMLLPILIGTDGVQKMSKSLGNYIG 287

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++    P   +Q  + + D  +  + + LT LP+  +            + + ++A E+
Sbjct: 288 LSEH---PGQKYQKLQGVPDNLLEQYFELLTDLPLDNLPE-------NPRDRQTLLAWEV 337

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               HG   A++A     E          +P  S++  E+S    L  ++   G   ST 
Sbjct: 338 VKQYHGETAAQEA----KEAAQSGGKEGAVPEFSLA--EISHPAKLAYILNVTGLCKSTG 391

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E +R ++   ++I+   I++                 L  GK   +  
Sbjct: 392 EGKRKIQEGGVRIDGDRITDVDTTFADSAQLQGK--VLQVGKNKFVRL 437


>gi|307151866|ref|YP_003887250.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306982094|gb|ADN13975.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 405

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 28/411 (6%)

Query: 14  ERGFIHQISNP-------RELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            RG      N          L  L ++    +   +G D T + +H GH      L   Q
Sbjct: 12  WRGTSEIFPNQPESDNPQENLTQLLAKIDRPLRVKLGIDPTGTEIHLGHSIPFRKLRAFQ 71

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  + ++G  T+ IGDP+ + E R+ + +++++EN           + + T      
Sbjct: 72  DAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTAEQVRENAHDYLKQLRPILDFDTP-GRLE 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  WL  +   D+++ + +  +V +ML+ E    R ++E  +   EF Y ++Q YD 
Sbjct: 131 IRYNSEWLGKLDLSDIIKLLSTM-TVGQMLAKEGFAERYEKETPIYLHEFLYPLMQGYDS 189

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSG 243
           V +    D  +++GG+DQ  NI  G DL         F L  P++  T    KM K+L+ 
Sbjct: 190 VAI----DADVELGGTDQKFNIAVGRDLQRYFGKKPQFGLLLPIILGTDGVQKMSKSLNN 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
            + L ++  S Y+       I DA +  + + LT L + E+            E +K++A
Sbjct: 246 YVGLREDALSMYS---KLEKIPDAVIKDYFELLTNLSLQEL-------PSNPRECQKLLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TEI +  H  E A +A  AA+        +        S   +     L  ++      +
Sbjct: 296 TEIVSQYHSVEAAAEAQKAAIALVQGGGTTSTDAVPEYSLSGIEFPAKLFYILSATRLCS 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S+ E RR ++  A++++   IS   L              L  GKK  +  
Sbjct: 356 SSGEGRRQIQGGAVRLDGERISEVDLTFDSPQQLQGK--VLQVGKKKFVRL 404


>gi|308234417|ref|ZP_07665154.1| tyrosyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 404

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 109/402 (27%), Positives = 174/402 (43%), Gaps = 21/402 (5%)

Query: 20  QISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI    EL    S Q  +T  +G D T+  LH GH   L  +   Q  GH  + ++G GT
Sbjct: 16  QIVPVDELKAKLSRQEPLTVKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVVLIIGNGT 75

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  +  + +++N           +          +++N  WL  +   
Sbjct: 76  ALIGDPSGRDSTRPPLTEEAVEKNAATYVEQAMKILDPQ----KTKIVHNGEWLKPLDLS 131

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  +   F+V R+L  E   +R    QS+S  EF Y +LQAYD V +       ++MG
Sbjct: 132 KMLGLMSK-FNVARILEREDFHNRYTNNQSISLHEFIYPVLQAYDSVVVH----ADVEMG 186

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL          ALT PLL  T    KM K+    + L     S  + 
Sbjct: 187 GNDQIFNLLAGRDLMRAEGMEPQVALTMPLLVGTDGTKKMSKSYGNYVGLT---DSADDM 243

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           +    +I D  + S+ +  +T  + EI   D   K +  +    K+ +A  I T+ HG  
Sbjct: 244 FGKLMSIPDELIASYYRLCSTFSLEEIDAVDEQFKNKTADPYALKRALAVNIVTLYHGEG 303

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHL 372
               A       F        +P  S S  +VS    + L  L+V    A +++EARR +
Sbjct: 304 AGLAAQNQFDAQFKHHEVPDDIPEFSTSLIDVSDDGMVYLAKLMVDCKLAPTSSEARRRI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +KI+   ++ +   I  +   +     L FGK++    
Sbjct: 364 DGGGVKIDGKAVAPKSYNISHERLHAG--TVLQFGKRSWAKL 403


>gi|296272457|ref|YP_003655088.1| tyrosyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096631|gb|ADG92581.1| tyrosyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 402

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 100/427 (23%), Positives = 170/427 (39%), Gaps = 35/427 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M     + L+ +  RG    I +   ++ L               G+D TA  LH GH  
Sbjct: 1   MENKIKEALAEIQ-RGSFE-IIDIESIEKLLKNYYEKGENFYVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  L   QK G     L+G  T+ IGDP+ + E+R+++  Q++ +N +  K      + 
Sbjct: 59  LLQKLSVFQKFGGIVQFLIGDFTASIGDPTGKSETRKVLSKQQVLDNAQSYKNQVFKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +T   ++ N  WL  +     L  + S  +V RML  +    R      ++  EF 
Sbjct: 119 ----ETKTEVVFNSNWLNDLGA-AGLINLASNLTVARMLERDDFSKRYASNTPIAVSEFT 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-AS 233
           Y +LQ YD V L       +++GG+DQ  N++ G  L +      +   L  P+L     
Sbjct: 174 YPLLQGYDSVFLK----SDIELGGTDQKFNLLMGRTLQKAYNIGKQQAVLMMPILEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KL 290
             KM K+L+  I +        N +    +I D  +  F + L++  + E+  +    + 
Sbjct: 230 VQKMSKSLNNYIGVT---DEANNMFGKVLSISDELMWRFYELLSSKSLKEVKELHEGVQK 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                   K  +A E+    HG     KA     + F        +    +  D      
Sbjct: 287 GTIHPKAVKDSLAIELVDRYHGEGAGLKAQEEFKKVFAKKDIPSDIAEFELKAD-----T 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +   +V     +ST++ARR +K+ A+KIN   I ++KL +        G   L  GKK+
Sbjct: 342 WICQALVDTNLVSSTSQARRDIKAGAVKINQEKIDDDKLNLSK------GEYILQKGKKS 395

Query: 411 HIICHLC 417
                + 
Sbjct: 396 FAKIVII 402


>gi|225873912|ref|YP_002755371.1| tyrosine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225793777|gb|ACO33867.1| tyrosine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 415

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 184/419 (43%), Gaps = 29/419 (6%)

Query: 11  ILSERGFIHQI--SN--PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L E+G    I  S+   R      +   +    G+D TA  LH GH   +  L   Q  
Sbjct: 12  DLLEKGAAEIIRVSDLRERLEKSRQTGKPLRVKAGFDPTAPDLHLGHTVLVRKLKHFQDL 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I L+G  T++IGDP+ R  +R+ +  ++I +N +         +     +    + 
Sbjct: 72  GHTVIFLVGDYTALIGDPTGRSATRKPLTREQIDQNAQTYTDQVFKILD----REKTEVR 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + + +  + + F+V++ML      +R + EQ +S  EF Y + Q YD V 
Sbjct: 128 FNSEWLGKLSF-EDIIRLAAKFTVSQMLERAEFHARFQNEQPISLHEFMYPLAQGYDSVA 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L    +  +++GG+DQ  N++ G +L      P    L +P++       KM K+L  AI
Sbjct: 187 L----EADVELGGTDQKFNLLAGRELQRDFGQPPQIVLMTPIIEGLDGVQKMSKSLGNAI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            +++    P   +    +I+D  +  +   LT L  SEID+M            EAKK +
Sbjct: 243 GIHEP---PQEMYGKLMSINDELMWRYWTLLTDLRQSEIDQMQAHVTSGALHPMEAKKHL 299

Query: 303 ATEITTMVHGREEAEKA-ATAAMECFDMSIHSQHMPTISISKDEV----SRGMGLLTLIV 357
           A  I    HG E A+ A    A +    S   + +  ++++ + +     +G+ +  L+ 
Sbjct: 300 ARTIVAGFHGAEAAQVADENWARQFQQKSDDVEGLEELTLTPEALGFDPEKGIRVSKLLT 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHIICH 415
             G A S++EA R +K  A++++  ++    + +          I    GK+    +  
Sbjct: 360 ALGLAASSSEADRKIKEGAVRLDGEVVRQSYIPLNGS---RPARITARVGKRAKVAVIE 415


>gi|57234594|ref|YP_181343.1| tyrosyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|115305803|sp|Q3Z8V6|SYY_DEHE1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57225042|gb|AAW40099.1| tyrosyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 396

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 101/415 (24%), Positives = 178/415 (42%), Gaps = 27/415 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    IL  RG    I       +L S   +    G+D ++  +H GH+  L  L
Sbjct: 1   MNQAENRIDQILK-RGVAEVIVEEDFKKLLLSGKKLRLKEGFDPSSPDIHLGHMVALRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++ N +     F   +      
Sbjct: 60  RQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVKANAKTYLEQFFKIVDKD--- 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +     W  + K  + +  + S F+V +ML+ +    R    + +S  E  Y +LQ
Sbjct: 117 -KTEVRWQSEWYANFKL-EDVVRLSSKFTVAQMLARDDFAKRYAAGKPISVTELLYPMLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGK 239
           AYD V +       ++ GG+DQ  N++ G +L E L       L  P+L  T    KM K
Sbjct: 175 AYDSVMVK----SDVEFGGTDQKFNLLVGRELQEMLGQKPQQVLMVPILVGTDGVHKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I + +    P   +    +I D  ++ + + +T +P +EI               
Sbjct: 231 SLGNYIGVAE---EPTEIFGKCMSIPDELILQYFELVTDIPATEIADFKNQMANGLVNPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             KK +A E+ T ++    AE+A              + MP   +   E    + ++  I
Sbjct: 288 VLKKRLARELITQLYSAAAAEEADAQFTRVVQRGEIPEDMPECRL---ENGESICVIDFI 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +KA  A S +EARR L+   ++IN++ IS+    +K  D        +  GK+ +
Sbjct: 345 IKADLAKSKSEARRLLEQGGVEINSAKISDPGTTVKCGD-------IIKAGKRRY 392


>gi|15645393|ref|NP_207567.1| tyrosyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024675|sp|P56417|SYY_HELPY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2313900|gb|AAD07821.1| tyrosyl-tRNA synthetase (tyrS) [Helicobacter pylori 26695]
          Length = 402

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 104/418 (24%), Positives = 189/418 (45%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGT-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDEKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DALGAKGMIELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+T  + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSTKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A+EI    +  ++A KA     + F  ++    +P I +S+ +   G+G+L ++ +
Sbjct: 295 KEDLASEIVARYYDNDQAIKAKEQFSKVFSANL----LPEI-LSESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  +I NE  +     F       +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVIKNESYR-----FVKGNY-VIQLGKKRFMKLNI 401


>gi|207092023|ref|ZP_03239810.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 402

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 190/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 EKH----TEVCFNSTWL-DALGAKGMIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAI----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  E+A KA     + F  ++    +P I +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNEQAIKAKEQFSKVFSANL----LPEI-LSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  +I NE  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKNESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|300869063|ref|ZP_07113664.1| tyrosyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300332920|emb|CBN58860.1| tyrosyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 410

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/424 (22%), Positives = 183/424 (43%), Gaps = 33/424 (7%)

Query: 2   PAFKSDFLSILSERGFIHQIS--------NPRELDILCS-QGVVTAYIGYDLTASSLHAG 52
               SDF  +L  RG              +   +  L +    +   +G D T + +H G
Sbjct: 7   STLTSDFSRLL--RGISEIFPNQPDSENPDENLIQRLATTDRPLRIKLGIDPTGADIHLG 64

Query: 53  HLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS 112
           H   +  L   Q  GH  + ++G  T+ IGDP+ + E+RR +  +++ +N +        
Sbjct: 65  HSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSEARRQLTPEDVAQNAQTYIDQVRP 124

Query: 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
            + + T      +  N  WL  +    +L  + +  +V +ML+ E   +RL++   +   
Sbjct: 125 ILDFDTP-GRLEIRYNSEWLSKLDLTKILELLATM-TVGQMLAKEGFDTRLEQGTPIYLH 182

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TT 231
           EF Y ++Q YD V +    +  +++GG+DQ  N+  G DL    +    F + +P+L  T
Sbjct: 183 EFLYPLMQGYDSVAV----EADVELGGTDQKFNLAVGRDLQRHFRIRPQFGMLTPILIGT 238

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
               KM K+L+  + L++    P   +Q  + + D  +  + + LT LP++E+       
Sbjct: 239 DGIQKMSKSLNNYVGLSEH---PSLMYQKLQRVPDNLLEQYFELLTDLPLNEL------- 288

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-MPTISISKDEVSRGM 350
             +  + ++++A ++    +  E A +A   AM            +P  S+   EV    
Sbjct: 289 PPDPRQRQQLLAFDVVKQYYDEETAIQARQTAMTIGQGDTTQADAVPEFSV--GEVKFPA 346

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L  ++  +G   S+NEARR ++ N +K++   +S+  L  +           L  GK  
Sbjct: 347 KLFYILSASGLCASSNEARRKIQENGVKLDGDRVSDVNLAFESPADLQDK--VLQVGKNK 404

Query: 411 HIIC 414
            +  
Sbjct: 405 FVRL 408


>gi|308063440|gb|ADO05327.1| tyrosyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 402

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNEQAIKAKEQFSKVFGANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNENYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|118602182|ref|YP_903397.1| tyrosyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567121|gb|ABL01926.1| tyrosyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 394

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 180/408 (44%), Gaps = 26/408 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           +  RG    +        L     +    G+D TA  LH GH   +  L  LQ  GH+ +
Sbjct: 9   IFTRGADETLPLDELKKKLKKSKPLRIKTGFDPTAPDLHLGHTILINKLKQLQDLGHEIL 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T++IGDP+ + ++R  +  ++IQEN +         +          ++ N  W
Sbjct: 69  FLIGDFTAMIGDPTGKSKTRPPLSREQIQENAKSYTKQVFKILDKD----KTTVVFNSQW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +  ++ + ++ S  +V +ML  ++   R K  Q++S  EF Y ++Q  D VEL    
Sbjct: 125 MDKMTSMEFI-QLASKQTVAKMLEHDNFSKRYKSGQAISIHEFLYPLVQGNDSVELK--- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L ++    +   LT P+L       KM K+L+  I ++  
Sbjct: 181 -SDVEIGGTDQKFNLLVGRELQKQAGQEQQVILTMPILEGLDGVQKMSKSLNNYIGID-- 237

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   +  I   + A +QGK   + K I+A EI T
Sbjct: 238 -DTPDEMFGKIMSISDELMWRYFELLSFQSLKVITDLKQAMMQGKNPRDIKFILADEIIT 296

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H  + A++     ++ F  +     M   S        G+ +  L+   G  +ST+ A
Sbjct: 297 RFHNIDTAKQMQQNFIDRFSKNQMPDEMDKFS-----FKAGIKIANLLKDTGLCSSTSNA 351

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + +     KIN   I+++ L+++       G      GK+      +
Sbjct: 352 YQMINQGGAKINGKKITDKNLELET------GTNIYQVGKRKFARVTI 393


>gi|108804150|ref|YP_644087.1| tyrosyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765393|gb|ABG04275.1| tyrosyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 388

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/400 (23%), Positives = 176/400 (44%), Gaps = 29/400 (7%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G +  +        L S   +   +G D TA  +H GH   L  L   Q  GH  + ++G
Sbjct: 13  GAVDVVPREELDRRLRSGERLRVKLGMDPTAPDIHLGHAVVLGKLRRFQDLGHTAVLVIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T+ +GDPS R ++R ++  ++I+EN           +     +    + +N  WL  +
Sbjct: 73  DYTARVGDPSGRSKTRPVLSPEQIRENTRTYLEQAYRVLD----EARTEVRHNSEWLAPL 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
              D++R   +  +V R+L  +    R      ++  E  Y ++QAYD V +    D  +
Sbjct: 129 ALADIIRLTRA-ATVARILERDDFAKRYAAGDPITLTELLYPLMQAYDSVAI----DADV 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSP 254
           ++GG+DQ  N++ G  + E         LT+PLL  T    KM K+L   I +++    P
Sbjct: 184 ELGGTDQLYNLLMGRHVMEYYGKRPQCILTTPLLVGTDGRMKMSKSLGNYIGVSEP---P 240

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
              +    +I D  +  +   +   PM E + + +         K+ +A  I  M HG E
Sbjct: 241 QEMFGKAMSIPDEAMPDYYTLVLGRPMPEAEPVEQ---------KRELARGIVRMFHGEE 291

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
            A +A           +    +P +++     +  + ++ LI +AGFA + NEARR ++ 
Sbjct: 292 AAREAERHFDTVVRRGVP-DDVPDVALPD---AGEVWIVDLITRAGFAATNNEARRFVRG 347

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A++IN  ++ +E++ +  ++        L  GK+ +   
Sbjct: 348 RAVRINGEVVEDERVSLPTEELSG---AVLQVGKRRYARL 384


>gi|157164866|ref|YP_001467339.1| tyrosyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112801848|gb|EAT99192.1| tyrosyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 402

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/425 (24%), Positives = 178/425 (41%), Gaps = 36/425 (8%)

Query: 4   FKSDFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQ 56
              D   IL E  RG + ++ +   ++ L               G+D TA  LH GH   
Sbjct: 1   MVQDIDDILQEINRG-VAEMIDAERVENLVKNYYEKGENFYVKAGFDPTAPDLHLGHTVV 59

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  +  LQK G     L+G  T+ IGDP+ +  +R+ +  + + +N +  +      +  
Sbjct: 60  LNKMALLQKHGAIVQFLIGDFTAQIGDPTGKSATRKKLDQETVLKNAKTYEEQVFKILDP 119

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                  +++ N  W   +    ++  + S FSV RML  +    R+K    +S  EF Y
Sbjct: 120 K----KTVIMFNSKWSNELGAAGMIE-LTSTFSVARMLERDDFEKRIKAGNPISISEFMY 174

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASG 234
            +LQ YD V +     C ++MGG+DQ  N++ G  L        +   +  PLL      
Sbjct: 175 PLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRTYNIGKEQAVIMMPLLEGLDGV 230

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG-- 292
            KM K+L   I + +     +       +I D  +  + + L+T  + EI+ +       
Sbjct: 231 NKMSKSLGNYIGVTENANDMFAKT---LSISDELMWRWYELLSTKTLGEIEELMNDVNSG 287

Query: 293 -KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
                +AK+ +A EIT   HG E A+ A          +     M   S+        + 
Sbjct: 288 KYHPKKAKEDLAYEITARYHGEEAAKAAMAEFNSVHSQNQLPTDMKEFSL-----KAPIW 342

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++  + + G + S ++ARR +K+NA+ +N   IS+E+L++        G   L  GK+  
Sbjct: 343 IVEALSQCGLSESNSQARRDIKANAVSVNQEKISDEQLKLGA------GEYILQVGKRKF 396

Query: 412 IICHL 416
               +
Sbjct: 397 AKIKV 401


>gi|254459356|ref|ZP_05072777.1| tyrosyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083969|gb|EDZ61260.1| tyrosyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 399

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 176/423 (41%), Gaps = 35/423 (8%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLM 58
              + L  + +RG   +I +   ++ L           T   G+D TA  LH GH   L 
Sbjct: 1   MLQEALREI-DRGS-AEIIDNERIEKLLKAYFEEGKTYTVKAGFDPTAPDLHLGHTVLLQ 58

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   QK G +   L+G  T+ IGDP+ +  +R+++  ++I++NI          +    
Sbjct: 59  KLATFQKYGARVQFLIGNFTATIGDPTGKSATRKVLSQEDIEKNIVSYTTQAFKILD--- 115

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            ++   ++ N+ WL  +    +L  + S  +V RML  +    R      ++  EF Y +
Sbjct: 116 -ESKTEIVYNKDWLEPLGAAGMLE-LASTLTVARMLERDDFSKRFTSNTPIAVSEFMYPL 173

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL-TSPLLTT-ASGTK 236
           LQ YD V L       +++GG+DQ  N++ G  L +     K  A+   P+L       K
Sbjct: 174 LQGYDSVHLK----SDVEIGGTDQKFNLLMGRQLQKTYDVKKQQAVLMMPILEGLDGVQK 229

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--- 293
           M K+L+  I +      P + +    +I D  +  F + L+T  + EI  +         
Sbjct: 230 MSKSLNNYIGVT---DEPNDMFGKVLSISDDLMWRFYELLSTKSLEEIATIKSGVEDGSL 286

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              + K+ +A EIT   H  E A+ A     +    S     +   S         + + 
Sbjct: 287 HPKKVKENLAIEITARFHNDELAQNAKEEFEKVHAKSQIPTEIEEFS-----CDGEIWIA 341

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      ST++ARR +K  A+KIN   IS+ +LQ+        G   L  GK+    
Sbjct: 342 QALVDCNIEPSTSQARRDIKQGAVKINQEKISDIQLQLST------GEYILQVGKRKFAK 395

Query: 414 CHL 416
             +
Sbjct: 396 LKV 398


>gi|332708551|ref|ZP_08428525.1| tyrosyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352648|gb|EGJ32214.1| tyrosyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 410

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/426 (22%), Positives = 171/426 (40%), Gaps = 30/426 (7%)

Query: 1   MPAFKSDFLSILSE--RGFIH---------QISNPRELDILCSQGVVTAYIGYDLTASSL 49
           M  F+    + L+   RG              S    + +  ++  +   +G D T + L
Sbjct: 1   MSNFEIPLSNQLAWLDRGTSEIFPLQPDSQDPSENLAIRLKQAERPLRVKLGIDPTGADL 60

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H GH   +  L   Q  GH  + ++G  T+ IGDP+ + E RR +   +++EN E     
Sbjct: 61  HLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTPAQVKENAETYLSQ 120

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
               + + T      +  N  WL  +   +++  + +  +V +ML+ E    R +++  +
Sbjct: 121 VRPILDFDTP-GRLEIRYNSEWLNQLDLSEIIELLATM-TVGQMLAKEGFAERYQQQNPI 178

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
              EF Y ++Q YD V +       +++GG+DQ  NI  G DL         F L  P+L
Sbjct: 179 FLHEFLYPLMQGYDSVAVK----ADVELGGTDQKFNIALGRDLQRHFGQSPQFGLLLPIL 234

Query: 230 -TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
             T    KM K+L   + L+ +  + Y+         D  +  + + LT +P+ ++    
Sbjct: 235 IGTDGIQKMSKSLGNYVGLSDDPLTMYS---KLEGTPDHLLTQYFELLTDVPLDQLPE-- 289

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
                +  E +K +A  I T  HG   A++A  AA+     S           S   V  
Sbjct: 290 -----QPREQQKQLALTIVTQYHGEAAAKEAQQAALNLVKGSTTGTGDSVPEFSLSSVDF 344

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              L  ++ ++G   S+ E RR ++   +K++   IS         D        L  GK
Sbjct: 345 PAKLFYILKESGLCQSSGEGRRQIQGGGVKLDGDRISAVDQTFDSPDQLVGK--VLQVGK 402

Query: 409 KNHIIC 414
           K     
Sbjct: 403 KKFARL 408


>gi|269115037|ref|YP_003302800.1| Tyrosyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322662|emb|CAX37397.1| Tyrosyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 411

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 130/422 (30%), Positives = 214/422 (50%), Gaps = 23/422 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + + L  L  RG ++ IS+  + + +        Y G+D TA SLH G+  Q++ L   
Sbjct: 1   MQKNILDDLKSRGVLNNISSEEKFNNISLG--TGVYTGFDPTAKSLHLGNYLQILSLLRF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +K G+KPI+++GG T +IGDPSFR+  R+ +  + + +N   IK     F          
Sbjct: 59  KKAGYKPIAILGGITGMIGDPSFRNSERKFLDQETLLQNKNAIKNQLQKF--------GL 110

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +++N  +      +D LR IG   +VN +L  +S+ +RL     L+F EF+Y +LQ +D
Sbjct: 111 EVIDNLDFYKHWTVVDFLRNIGKLINVNYLLEKDSITTRL--ANGLTFTEFSYTLLQGWD 168

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +N++ ++QMGGSDQWGNI  G+++  +L        A+T  LL   +G K GK+ 
Sbjct: 169 FKCLYENHNVKIQMGGSDQWGNITTGLEIIRKLHGESADAVAMTFNLLVDENGKKFGKST 228

Query: 242 -SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEA 298
             G++WL+  MTSPY+ +Q+  N  D  +  + K LT L + EI+++     +      A
Sbjct: 229 GGGSLWLDPNMTSPYSIYQFLLNQSDVKIEEYLKWLTFLEVEEINKIMTQHNENKTKRIA 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLL 353
           +K +A E+   +HG + A K    +   F+ S    ++  IS     +   EV  G   +
Sbjct: 289 QKKLAFELVKDIHGVDIANKCIRISEILFNKSNEELNIEDISMLLGYLPCIEVKEGEKFI 348

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++      +S  EAR  +  N   I+N+II++E   I    F +     L  GKK+  I
Sbjct: 349 EILKNNQIVSSNREAREFISKNTFLIDNNIINDENYSITFNKF-NGQYALLKKGKKDFYI 407

Query: 414 CH 415
             
Sbjct: 408 LK 409


>gi|261837994|gb|ACX97760.1| tyrosyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 402

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDELMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|88797574|ref|ZP_01113163.1| tyrosyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779746|gb|EAR10932.1| tyrosyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 411

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/411 (24%), Positives = 172/411 (41%), Gaps = 24/411 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG    +     +  L S   +    G+D TA  LH GH   +  +   Q+ GH
Sbjct: 21  LAELR-RGTEEILLEDELVAKLKSGKKLRIKAGFDPTAPDLHLGHTVLINKMRQFQEMGH 79

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  T +IGDP+ +  +R  +  +EI+ N    K      +          +  N
Sbjct: 80  TVIFLIGDFTGLIGDPTGKSVTRPPLTEEEIEANALTYKEQVFKILDP----EKTEVRFN 135

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W       D + ++    SV RML  +  + R K  QS+S  EF Y ++Q YD V L 
Sbjct: 136 SEWFADKGA-DFMIKLAGQLSVARMLERDDFKKRFKANQSISIHEFLYPLVQGYDSVAL- 193

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
              +   ++GG+DQ  N++ G +L +         + +PLL       KM K+L   + +
Sbjct: 194 ---EADFELGGTDQRFNLLMGRELQKGEGQEPQVVMMTPLLEGLDGVKKMSKSLGNYVGI 250

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATE 305
           N+    P   +Q   +I D+ +  + + L+   + EI+++ +         + K  +A E
Sbjct: 251 NEA---PGTMFQKIVSIPDSLIWRWYELLSFKTLEEIEQLKQQVESGGNPRDVKIELARE 307

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    HG E A  A   A          +  P + +S  E +  + +  +I KA  AT++
Sbjct: 308 IVARFHGDEAAATAHKGAGNIIQEGEVPEGTPEVVVSL-EGAEQLPIGAIINKANLATNS 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +A+  LK+  +K+       E   ++       G   +  GKK      L
Sbjct: 367 AQAKDMLKNGRVKV-------EWDVVEPSLMLGPGRYLIQAGKKKIAWVVL 410


>gi|312876148|ref|ZP_07736136.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797134|gb|EFR13475.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 396

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/393 (25%), Positives = 181/393 (46%), Gaps = 28/393 (7%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L     +   +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + 
Sbjct: 26  KLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKS 85

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E+R+ +  +E+Q+N E  K      +          +  N  WL  + ++D++  + S +
Sbjct: 86  ETRKQLTKEEVQKNAEPFKQQVLKILDPQ----KTTIRYNSEWLEPMNFLDVI-NLASKY 140

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ 
Sbjct: 141 TVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILM 196

Query: 209 GIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           G  L +       ++  L   L+ T    KM K+L   I +N+    P   +    +I D
Sbjct: 197 GRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINEP---PNVMYGKVMSIPD 253

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAA 323
             ++S+ +  T L   EI+ + +   +      +AK  +A EI  + HG E A KA    
Sbjct: 254 EIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVKLYHGEEAALKAEEEF 313

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           ++ F       ++P + +   +V     L   +V+    +ST+E  R +KS A+K+N   
Sbjct: 314 IKVFQKKDIPDNIPEVELESSKVY----LPRFMVENKLCSSTSEGMRLIKSGAVKLNGEK 369

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +++  ++++  D        L  GK   +   L
Sbjct: 370 VNDLDIELQNGD-------VLQVGKLKFVKIKL 395


>gi|17230474|ref|NP_487022.1| tyrosyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81771136|sp|Q8YSU9|SYY_ANASP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17132076|dbj|BAB74681.1| tyrosyl tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 398

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 90/396 (22%), Positives = 163/396 (41%), Gaps = 26/396 (6%)

Query: 22  SNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           S+   L+     +   +    G D T + +H GH   +  L   Q  GH  + ++G  T+
Sbjct: 24  SDIESLEKRLATTDRPLRVKYGIDPTGADIHLGHSIPMRKLRGFQDAGHTAVLIIGDFTA 83

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ + E RR +  +++++N +         + + T      +  N  WL  +    
Sbjct: 84  RIGDPTGKSEMRRQLTEEDVKQNAQTYLDQVRPILDFDTP-GRLEVRYNSEWLSRLDLGK 142

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +   + +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +    +  +++GG
Sbjct: 143 ITELLATM-TVGQMLAKEGFADRYKKENPIFLHEFLYPLMQGYDSVAI----EADVELGG 197

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  NI  G DL         F +  P+L  T    KM K+L   + L++    P   +
Sbjct: 198 TDQKFNIAVGRDLQRHFGQKPQFGVLLPILIGTDGVQKMSKSLGNYVSLSEH---PGQKY 254

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           Q  + + D  +  + + LT LP+  +            + + ++A EI    HG     +
Sbjct: 255 QKLQGVPDVLLKDYFELLTNLPIDALPE-------NPRDRQMLLAWEIVKQYHGE----Q 303

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           AA  A E          +P  S+S       + L  L+   G   ST E +R ++   ++
Sbjct: 304 AANEAKEAAQSGGKEGAVPEFSLSNVS-QFPVKLAYLLGATGLCKSTGEGKRKIQEGGVR 362

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++   IS+     +  D        L  GK   +  
Sbjct: 363 LDGDRISDADTTFQQPDELQGR--VLQVGKNKFMRL 396


>gi|116625757|ref|YP_827913.1| tyrosyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116228919|gb|ABJ87628.1| tyrosyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 398

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/401 (22%), Positives = 162/401 (40%), Gaps = 27/401 (6%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           R  + +I    +L         +   +    G+D TA  LH GH   L  +   Q  GH 
Sbjct: 11  RKGMAEIIREEDLRERLIQSEKTGRKLRVKAGFDPTAPDLHLGHTVLLRKMKHFQDLGHT 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T +IGDP+ R+ +R  M ++ I+ N E  K      +          +  N 
Sbjct: 71  VIFLIGDMTGMIGDPTGRNVTRPPMTTEAIERNAETYKQQVFKILDPA----KTEVRFNS 126

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  ++  + + ++ S ++V R+L  +    R      +S  E  Y + Q YD V L  
Sbjct: 127 HWLAPLR-WEEVIKLTSKYTVARLLERDDFAKRYAANAPISLHELMYPLAQGYDSVAL-- 183

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  ++MGG+DQ  N++ G +L              P+L       KM K+L   I + 
Sbjct: 184 --ESDVEMGGTDQKFNLLVGRELQRDYGQQPQIVAMVPILEGLDGVNKMSKSLGNYIGIT 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           +    P   ++    + D  +  + + LT   ++EI   A  +     EAK  +   I  
Sbjct: 242 EA---PEVMFRKVMQVSDDLMWRYYELLTDKSLAEIA--AMQRSMHPMEAKVALGKHIVA 296

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTNE 367
             H  E+AE+AA               +PT+ + +      G+ +  L+ + G   S  +
Sbjct: 297 DFHTAEDAERAAEVFNAVVRRKEVPSDVPTVPMPEGVMTQAGLRVDKLLARIGLVASVTD 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           A R +K+ A++IN   +    +       +    + +  GK
Sbjct: 357 AVRKIKAGAVEINGEKVREVLMA------NPPAEMVIQVGK 391


>gi|210631213|ref|ZP_03296803.1| hypothetical protein COLSTE_00688 [Collinsella stercoris DSM 13279]
 gi|210160124|gb|EEA91095.1| hypothetical protein COLSTE_00688 [Collinsella stercoris DSM 13279]
          Length = 404

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 20/402 (4%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            +I    +L     +G  +   +G D T+  LH GH   L  +   Q  GH+   ++G G
Sbjct: 16  AKIVPEADLKKKLERGVPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVTLIIGNG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T+ IGDPS ++ +R  +  +E++ N           +          +++N  W+  +  
Sbjct: 76  TATIGDPSGKNSTRPQLTQEEVEANAATYVAQAMKILDP----EKTTIVHNGDWMFPMGL 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            +LL  I S F+V R+L  +    R + +  ++  EF Y I+QAYD V++    +  ++M
Sbjct: 132 AELLS-IASKFTVARILERDDFTKRYQSQTPIALHEFLYPIMQAYDSVKI----EADVEM 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E++      ALT PLL  T    KM K+    I L      P +
Sbjct: 187 GGNDQLFNLLAGRELMEKMGMEPQIALTMPLLEGTDGTRKMSKSYGNYIGLT---DEPAD 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGR 313
            +    +I D  +  + +  ++L   E+D++            E K+ +  ++ T  H  
Sbjct: 244 MFGKTMSIPDEMIGKYYRLASSLSPEEVDKIDAALADGSANPYELKRALGRDLVTTYHSA 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG-LLTLIVKAGFATSTNEARRHL 372
           E A  A     +          +  +++       G+  L  ++  AG A S  +ARR +
Sbjct: 304 EAAVAAEAEFDQVHKNREMPSDIAEVAVEIVVNDEGLVYLPAVLQAAGLAPSAGQARRDI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +K++   ++ +   +            L  GK++    
Sbjct: 364 DGGGVKLDGEAVAPKAYNVDPAALKPG--TVLQVGKRHFARL 403


>gi|297181938|gb|ADI18115.1| tyrosyl-tRNA synthetase [uncultured Acidobacteriales bacterium
           HF0200_23L05]
          Length = 414

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/420 (24%), Positives = 177/420 (42%), Gaps = 32/420 (7%)

Query: 1   MPAFKSDFLSILS--ERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGH 53
           M +   D    L+   +G +  +    +L         S   +T  +G+D TA  LH GH
Sbjct: 7   MTSMTID--EQLTYLTKGCV-DVVRETDLRKRLEQSAESGQPLTVKVGFDPTAPDLHLGH 63

Query: 54  LTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF 113
              +  +   Q+ GH+ I L+G  T +IGDP+ R ++R  + S EI+EN E  K      
Sbjct: 64  TVLIRKMKHFQELGHRVIFLIGDFTGLIGDPTGRSKTRPALSSAEIEENAETYKRQVFKL 123

Query: 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
           +         ++  N +WL  +     +  + + ++V +ML     R R +  Q ++  E
Sbjct: 124 LDPD----KTVVDFNSSWLSGLGSDGWV-RLAARYNVAQMLERRDFRKRYETGQPIAIHE 178

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-A 232
           F Y + QAYD V L       +++GG+DQ  N+  G D+    +      LT+PLL    
Sbjct: 179 FLYPLAQAYDSVYLH----ADVELGGTDQLFNLNVGRDIMPSYEVRPQIVLTTPLLVGLD 234

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ- 291
              KM KT    + +N+    P   +    ++ D  +  + + LT L +++I+ + +   
Sbjct: 235 GTEKMSKTAGNYVGINEP---PGEMFGKLMSVSDDLMWDYYELLTDLSVADINTLKQGVA 291

Query: 292 --GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
                  +AK  +A  +    H  +EA++AA      F      + +            G
Sbjct: 292 SGVTHPKQAKVDLAKHVVGDFHSVQEAQEAAGEFERRFSRKEVPEVVEEWM--GRVPEEG 349

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L  L+V AG A S + A R L    +KI+   + +    I        G+  L  G++
Sbjct: 350 QRLTALMVAAGMAKSGSAATRVLSQGGVKIDGVRVEDRFHTIAATQ----GSFVLQVGRR 405


>gi|194335972|ref|YP_002017766.1| tyrosyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308449|gb|ACF43149.1| tyrosyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 405

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 170/409 (41%), Gaps = 25/409 (6%)

Query: 11  ILSERGFIHQISNPR---ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L     +  IS      +L      G  +   +G D +   LH GH   L  L   Q  
Sbjct: 11  DLIVANVVEIISVEELEQKLRQSLKCGLPLKIKLGADPSRPDLHLGHSVVLRKLREFQDF 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I ++G  T++IGDPS + ++R  + ++E +EN        S  +          + 
Sbjct: 71  GHEAILIIGDFTAMIGDPSGKSKTRPQLSAEEARENGLSYFEQASKILDP----EKTTIC 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + D+++ + S ++V RML  +    R + ++ +S  EF Y + Q  D V 
Sbjct: 127 YNADWLGKMSFADVIK-LSSHYTVARMLERDDFERRYRAQEPISIHEFLYPLAQGMDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G  L           +T PLL  T    KM K+L  AI
Sbjct: 186 LKND----VELGGTDQKFNLLVGRALQREYGIEPQVCITMPLLVGTDGKEKMSKSLGNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
             N    SP + +    +I D  + ++ K L       +  +     +    AK+ +A  
Sbjct: 242 CFN---DSPSDIYGKVLSIPDTLIETYCKLLVPKEDEGVGAILDEITENPRTAKRALAKT 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I  +   ++EA+ A +   + F       H+             + L+ L+V  G ATS 
Sbjct: 299 IAALYSSQKEADDAESQFDQLFIHKKAPDHIELFEFD----ESSISLIDLLVTLGAATSK 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++ARR ++  ++ ++   I      I+L          +  GK+     
Sbjct: 355 SDARRMIQQKSVLVDERKIEEIAECIELSLEAK----IIRAGKRRFFKV 399


>gi|218960943|ref|YP_001740718.1| tyrosyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729600|emb|CAO80512.1| tyrosyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 400

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 187/411 (45%), Gaps = 28/411 (6%)

Query: 12  LSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG    I+                 +    G D T   +H GHL  +  +   Q  G
Sbjct: 9   LISRGVEEIITLEELKAKFAKAEKTGKPLRIKYGIDPTGYDVHLGHLVPIRKMRQFQDLG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  + ++G  T+ IGDP+ RDESR  + +++++ N EK      + +K    K    +  
Sbjct: 69  HIGVIIIGDFTAQIGDPTGRDESRPPLSAEQVKRNSEKFMEQLYTVLK----KEQTEVRY 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              W   +  +  + ++   F++ + ++ ++ R R ++  +L   E  Y +LQ YD V +
Sbjct: 125 QSEWFGKMG-MSDVIKLLGKFTLAQFMAHQTFRQRYEQGLALGMHEILYPVLQGYDSVAV 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIW 246
               +  +++G ++Q  NI+CG D+       +  A+ SP+L  T    KMGK+L+  I 
Sbjct: 184 ----NSDVELGATEQKFNILCGRDMQSHFGMEEQVAILSPILIGTDGVNKMGKSLNNYIA 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           +      P   +    +I D  ++++    TTLP  EI+++ K      N    KK +A 
Sbjct: 240 VF---DPPTEKYGKVMSIPDNIILNYFYYATTLPEEEIEKIKKELESGTNPMLIKKRLAR 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T+ H  EEA++A  A  + F +      +P   +SK+       L  L+V +G  ++
Sbjct: 297 EIVTLYHSAEEAKEAEYAFEKQFSLREVPNDIPEFVVSKNSCK----LSNLLVDSGICST 352

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             EA+R ++  A+ +N   I+     + L+D D      +  GK+N+I   
Sbjct: 353 NGEAKRLIQGGAVSLNGEKITAFDAVVNLKDGD-----IIRAGKRNYIKIK 398


>gi|160878919|ref|YP_001557887.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427585|gb|ABX41148.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 402

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 93/411 (22%), Positives = 182/411 (44%), Gaps = 28/411 (6%)

Query: 12  LSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + ++G +  +    EL             +T  +G D +A  +H GH   L  +  +Q  
Sbjct: 10  IIKKGVL-DMMREEELREKLKVSVEQNNPLTIKLGLDPSAPDIHLGHTVVLRKIKQMQDL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I ++G  T  IGDP+ + ++R+ +  ++++EN           +     +    + 
Sbjct: 69  GHRAIIIIGDFTGRIGDPTGKSKTRKPLTDEQVKENAATYMEQIFKVLD----REKTEVR 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + +  ++    S  +V R+L  +  ++R K ++++   EF Y ++Q YD VE
Sbjct: 125 FNSEWLSKLNFEQVISLASSM-TVARLLERDDFQNRYKNQEAIGLHEFFYPLMQGYDSVE 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           +       +++GG+DQ  NI+ G  L + +   +  A+  P+L    G  KM K+L   I
Sbjct: 184 IK----ADIELGGTDQTFNILMGRTLQKSVGMSQQIAMFMPILEGLDGIEKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            +++   SP   ++    + D  +  + + +T     +I+  R+   QGK   + K I+A
Sbjct: 240 GVSE---SPQVMFKKVMEVPDQLIFRYFELVTDEHPDDIEKLRIEMEQGKNPRDIKLILA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             IT + HG E A+       + F      + MP I + K++      +  ++   G   
Sbjct: 297 RIITNLYHGEEGAKAGEEYFEQVFKEGEIPEDMPVIKLEKEQ-DSLASVAGVLASEGLVP 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S +E RR +K   +++N   + +    +  Q+        L  GKK  +  
Sbjct: 356 SASEFRRLIKQGGVQLNREKVLDIDCVLTEQEN------VLKIGKKKFVRL 400


>gi|300856593|ref|YP_003781577.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436708|gb|ADK16475.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 407

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 177/409 (43%), Gaps = 29/409 (7%)

Query: 18  IHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + Q+ + + L     +       +   +G D +A  +H GH   L  +  +Q  GH+ + 
Sbjct: 15  VSQVVSEKNLKRKLEKSVSSGIPLRIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHQAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDPS + ++RR + ++++ EN    +      +          +  N  WL
Sbjct: 75  IIGDFTGKIGDPSGKSKTRRQLTTEQVIENARTYEKQVFKILDRD----KTEVRFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + + ++    +V R+L  +    R K  + +   EF Y ++QAYD V +     
Sbjct: 131 SKLNF-EDVLKLAGKVTVARILERDDFEKRYKNNKPIGLHEFFYPLMQAYDSVAVK---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEM 251
             ++MGG+DQ  N++ G  L          AL  PLL  T    KM K+L   I + ++ 
Sbjct: 186 ADIEMGGTDQTFNVLMGRTLQGDYSQESQIALFMPLLEGTDGVEKMSKSLGNYIGICEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
            S Y   Q    I D  ++ + +  T +   E++ +            + K  +A EITT
Sbjct: 246 ISIY---QKIMTIPDNLIIKYFELATDIHPDEVEAIKLKLNNTETNPRDIKMQLAKEITT 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATSTN 366
           +  G  EAE A       F  ++    +    +S+D    +  + L+ +I  +G A S +
Sbjct: 303 LYCGVSEAESAEEHFKTVFQKNLIPNDIDEFILSQDCFASNDEVNLVKIITGSGIAASNS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EA+R +  NA++IN    +N  +Q      +S  +  +  GK   +   
Sbjct: 363 EAKRLIDQNAVRINGKKYNNFLMQ------NSGNSFVIQVGKSKFVKVR 405


>gi|285808325|gb|ADC35855.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 92]
          Length = 404

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 29/413 (7%)

Query: 15  RGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG +  +     L    +        +   +G+D TA  LH GH   +  +   Q  GH+
Sbjct: 12  RGCV-DVVRLDALKARLTARLAAGRPLVVKVGFDPTAPDLHLGHTVLIRKMKHFQDLGHR 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T++IGDPS R ++R  +   EI  N E  K      +     +   ++  N 
Sbjct: 71  VVFVVGDFTAMIGDPSGRSKTRPPLTPDEIDRNAETYKAQVFKILD----REKTVVEFNS 126

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +     L  + + ++V +ML     R R    Q ++  EF Y + QAYD V L  
Sbjct: 127 RWLSPLGA-SGLIRLAARYNVAQMLERREFRQRFDAGQPIAVHEFLYPLAQAYDSVAL-- 183

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  +++GG+DQ  N+  G D+           +T+PLL       KM K+L   + + 
Sbjct: 184 --EADVELGGTDQLFNLNVGRDIMPSYGLEPQIVMTTPLLEGLDGVEKMSKSLGNYVGVT 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATE 305
           +   S +       +I D  +  + + LT L   EID +            +AK  +A  
Sbjct: 242 ESADSMF---GKLMSISDTLMWRYYQLLTDLGGPEIDTLQAKVTSGDVHPKQAKVDLARR 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H   +A++AA               + ++++   E      L  L+V AG A ST
Sbjct: 299 IVADYHSTTDADRAAEEFERVHARGELPSDLRSVAV-VFEPDPSKALTRLMVDAGLAAST 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +EA R ++   +++  + I++ + +++  D  S     L  G   H +  + G
Sbjct: 358 SEAGRKIQQGGVRLAGTRIADARHRVQPSDLPS----VLQVG--RHAVQLVAG 404


>gi|297379972|gb|ADI34859.1| tyrosyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 402

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|317177394|dbj|BAJ55183.1| tyrosyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 402

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|308062095|gb|ADO03983.1| tyrosyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 402

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 187/426 (43%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN   I +E  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEAIKDEGYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|241956354|ref|XP_002420897.1| tyrosine-tRNA ligase, putative; tyrosyl-tRNA synthetase,
           mitochondrial precursor, putative [Candida dubliniensis
           CD36]
 gi|223644240|emb|CAX41050.1| tyrosine-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 501

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 124/458 (27%), Positives = 210/458 (45%), Gaps = 44/458 (9%)

Query: 2   PAFKSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
               +  L  L  R  I  I++    +L    +      Y G D TASSLH G+L  LM+
Sbjct: 46  TNPDNSLLEYLQSRHLIESITDDSLYKLTKRGTNHKFKLYCGADPTASSLHLGNLLPLMV 105

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   + +G+  + L+GG T ++GDPS R   R  +   E+++N+ KI+   S+F+  G  
Sbjct: 106 LLHFKMSGNDVVGLVGGATGLVGDPSGRKTERNKIDEVEVEDNVTKIQRQISTFLSNGIE 165

Query: 120 KTD------------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                             +NN +W  ++K ++ L   G    V+ ML+ +S++SRL+   
Sbjct: 166 YAKSRQFPMTEKLGETTSVNNASWWENVKMLEFLAVYGRHIRVSSMLARDSIQSRLESG- 224

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-----LKTPKLF 222
            + F EF Y ILQAYDF  L K+ +  +Q+GG+DQWGNI  GIDL  R      K  + +
Sbjct: 225 GIGFNEFTYQILQAYDFWHLYKDENVNMQVGGNDQWGNITAGIDLISRLRKFHDKKHEAY 284

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PLLTT+SG K GK+   A++++  +T+PY  +QY+ N+ D  V    K  T LP++
Sbjct: 285 GLTVPLLTTSSGEKFGKSAGNAVFIDSNLTTPYQMYQYFINVPDDIVGKLLKVFTLLPLN 344

Query: 283 EID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA--AMECFDMSIHSQHMP 337
            I+            +  A++++A E+  ++HG    ++ A     +        + ++ 
Sbjct: 345 VIEGELLPKHNSDPGLRIAQRVLAREVVDLIHGVGVGDEMAFITGFLFPTPDQPFNDNVS 404

Query: 338 TISI-------------SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK--INNS 382
              +              K      + L  L+       S +E RR +K+  +   ++ +
Sbjct: 405 ADKLIENFKRSGILFKRDKPSPEEEIKLSALLADI-VGKSKSEMRRLIKAGGVYMGLDRN 463

Query: 383 IISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHLC 417
            I +    I             + +  GK+N+ +    
Sbjct: 464 QIEDPDDVILFDVDNHLIDGKLLLVRVGKQNYYVVEFV 501


>gi|229815735|ref|ZP_04446060.1| hypothetical protein COLINT_02784 [Collinsella intestinalis DSM
           13280]
 gi|229808651|gb|EEP44428.1| hypothetical protein COLINT_02784 [Collinsella intestinalis DSM
           13280]
          Length = 404

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 93/402 (23%), Positives = 166/402 (41%), Gaps = 20/402 (4%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            +I    +L     +G  +   +G D T+  LH GH   L  +   Q  GH+   ++G G
Sbjct: 16  SKIVPEADLKKKLERGVPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVTLIIGNG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T+ IGDPS ++ +R  +  +E++ N           +          +++N  W+  +  
Sbjct: 76  TATIGDPSGKNSTRPQLTQEEVEANAATYVSQAMKILDP----EKTTIVHNGDWMFPMDL 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            +LL  I S F+V R+L  +    R + +  ++  EF Y I+QAYD V++    +  ++M
Sbjct: 132 KELLS-IASKFTVARILERDDFTKRYQSQTPIALHEFLYPIMQAYDSVKI----EADVEM 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYN 256
           GGSDQ  N++ G +L E++      ALT PLL  T    KM K+    I L     +P +
Sbjct: 187 GGSDQLFNLLAGRELMEKMGMEPQIALTMPLLEGTDGTRKMSKSYGNYIGLT---DAPAD 243

Query: 257 FWQYWRNIDDADVVSFAKRLT---TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
            +    +I D  +  + +  +      +  ID           E K+ +  ++ T  H  
Sbjct: 244 MFGKTMSIPDEMIGKYYRLASSLAPAEVDAIDAALADGSANPYELKRALGRDLVTTYHSA 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG-LLTLIVKAGFATSTNEARRHL 372
           E+A  A                +  +S+       G+  L  ++  AG   S  +ARR +
Sbjct: 304 EDAVAAEAEFDRVHKNHDLPTDIAEVSVEISVNDEGLVYLPAVLQAAGLVPSAGQARRDI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +K++   I+ +   +            L  GK+     
Sbjct: 364 DGGGVKLDGEAIAPKTYNVDPATLKPG--TVLQVGKRKFARL 403


>gi|269837291|ref|YP_003319519.1| tyrosyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786554|gb|ACZ38697.1| tyrosyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 407

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 169/410 (41%), Gaps = 26/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L        +        L     +   +G D T   +H GH      L   Q  GH
Sbjct: 16  VEHLLTHAVADVVVKEDLRRELLGTRPLRVKLGVDPTRPDIHLGHYVCFRKLREFQALGH 75

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + + ++G  T+ IGDPS R   R+M+  +E++ N +     F   +        A +   
Sbjct: 76  QIVVIIGDWTARIGDPSGRSVQRQMLSEEEVRRNAQTYLDQFFKVVDVD----RAEIRWQ 131

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TW       D++  + S ++V +ML+ E    R      ++  E  Y +LQAYD V + 
Sbjct: 132 STWYNDFTLADVI-HLTSKYTVAQMLAREDFAKRFNEGSPIAITELLYPLLQAYDSVAV- 189

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWL 247
              +  +++GG+DQ  N++   D+   +       LT PLL  T    KM K+    I +
Sbjct: 190 ---EADVEIGGTDQTFNLLVARDIQREMGQRPQNILTVPLLVGTDGVQKMSKSFDNYIAV 246

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIAT 304
           N     P   +    +I D+ +  + + LT +P SEI  M   A        + K+ +  
Sbjct: 247 N---DPPEEMFGKIMSIPDSLLGDYYRLLTDVPESEITSMLDAAVRGEVNPRDLKERLGM 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            I T +H  E+AE A  A    +      + MP +++ ++E      +L L++ AG A +
Sbjct: 304 IIVTDLHSAEDAEAAREAFDRVYRRRELPEDMPEVAVPREE-----RILPLLITAGMART 358

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            NEARR +    +++    + + +  +            L  GK+  +  
Sbjct: 359 NNEARRLVTQGGVRLGGERVIDPEATV-----MINAPTVLQVGKRRFVRL 403


>gi|188527381|ref|YP_001910068.1| tyrosyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188143621|gb|ACD48038.1| tyrosyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 402

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 188/426 (44%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL        + E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 QKH----TEVCFNSTWL-DALGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-AS 233
           Y +LQ YD V +    D  +++GG+DQ  N++ G  L        +   +T PLL     
Sbjct: 174 YPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +    P   +    ++ D  +  +   L+   + +I+ +      
Sbjct: 230 VQKMSKSLGNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEKIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNEQAIKAKEQFSKVFGANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNENYR-----FVKGNY-VIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|224438178|ref|ZP_03659113.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144623|ref|ZP_07806816.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129654|gb|EFR47271.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 400

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 107/421 (25%), Positives = 177/421 (42%), Gaps = 35/421 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           ++ +  L  RG +  I     +  L      +        G+D TA  LH GH   L  L
Sbjct: 4   TEAMQELK-RGCVEFI-GENYIHTLVERFYKNGKRFCVKAGFDPTAPDLHLGHTVLLQKL 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK G     L+G  T+ IGDPS + E+R+ +  ++++ N    K      +      
Sbjct: 62  ATFQKYGGDVKFLIGDFTATIGDPSGKSETRKPLSKEQVEANAITYKEQVFKVLDPKY-- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +     +  + S FSV RML  +    R    Q +S +EF Y +LQ
Sbjct: 120 --TEVCFNSKWLSELGA-GGIIHLTSKFSVARMLERDDFTKRYNNNQPISMVEFMYPLLQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMG 238
            YD V L    +C +++GG+DQ  N++ G  L        +   +T PLL       KM 
Sbjct: 177 GYDSVAL----ECDIELGGNDQKFNLLVGRSLQRSYGLDKEQSVMTMPLLEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEI 295
           K+L+  I + +   + Y       +I D  +  + + L++L + EI  +      Q    
Sbjct: 233 KSLNNYIGVTESANTMYA---KILSISDEMMWRYYELLSSLSLQEIAELKAQVESQKAHP 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
              K+ +A EIT   H  + A+KA       F        + T +  KDE      +  +
Sbjct: 290 KSVKEQLALEITQRYHNIDLAKKAKIEFDNVFSKDEIPADLATFTCEKDE-----WIAKV 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  A    ST++ARR +++ A+KIN   I++E L++        G   +  GK+      
Sbjct: 345 LTYAQLCESTSQARRDIRAGAVKINKEKITDENLKLSS------GEYIVQIGKRRFAKVI 398

Query: 416 L 416
           +
Sbjct: 399 I 399


>gi|217033733|ref|ZP_03439159.1| hypothetical protein HP9810_7g14 [Helicobacter pylori 98-10]
 gi|216943782|gb|EEC23222.1| hypothetical protein HP9810_7g14 [Helicobacter pylori 98-10]
          Length = 402

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 187/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDQKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DTLGTKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+T  + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSTKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ +
Sbjct: 295 KEDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKRFMKLNI 401


>gi|22297594|ref|NP_680841.1| tyrosyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|81744029|sp|Q8DMR1|SYY_THEEB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22293771|dbj|BAC07603.1| tyrosyl tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 408

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 101/426 (23%), Positives = 177/426 (41%), Gaps = 34/426 (7%)

Query: 1   MPAFKSDFLSILSERGFIH-------QISNPRELDILC--SQGVVTAYIGYDLTASSLHA 51
           M +     ++ L  RG +         +     L      +Q  +    G D T S +H 
Sbjct: 1   MSSDLEATIARLQ-RGVVETFPHVPDSVKPEENLWAYLRQTQRPLRIKFGIDPTGSEIHL 59

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
           GH   L  L   Q  GH  + ++G  T+ IGDP+ + E R+ +  +E+  N++       
Sbjct: 60  GHSIVLRKLRQFQDAGHCAVLIIGDFTAQIGDPTGKSEVRKQLTPEEVAANVQTYLEQVR 119

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
             + + T      +  N  WL  +    +L  +G+  +V +ML+ E    R  +E  +  
Sbjct: 120 PILDFETP-GRLEIRYNSEWLAKLDLRKVLELLGTM-TVGQMLAKEGFAERYAKETPIFL 177

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLL- 229
            EF Y ++Q YD V +A      +++GG+DQ  NI  G DL    + P   F L  P+L 
Sbjct: 178 HEFLYPLMQGYDSVAVA----ADVELGGTDQKFNIAVGRDLQRHFRLPTVQFGLLMPILV 233

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
            T    KM K+L   + L +   S Y+       I DA V  + + LT LP+  +     
Sbjct: 234 GTDGVQKMSKSLGNYVALTESAASMYS---KLEKIPDALVNQYIELLTDLPLDSL----- 285

Query: 290 LQGKEINEAKKIIATEITTMVHGRE--EAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
                  + +K +A  + +  HG+E     +A  AA+     +  +  +P  S+   E  
Sbjct: 286 --PTHPRDRQKALALAVVSQYHGQELALQTQAELAAIVTQGQTAQAGSIPEYSL--GEFQ 341

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + L  ++       S++EARR ++   +++N   I++    +   +        L  G
Sbjct: 342 FPVKLTYVLSHTKLCPSSSEARRQIQGGGVRLNGEKITDVDFTLTAPEPYVNQ--VLQVG 399

Query: 408 KKNHII 413
           KK  + 
Sbjct: 400 KKKFLR 405


>gi|313111703|ref|ZP_07797496.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 39016]
 gi|310883998|gb|EFQ42592.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 39016]
          Length = 399

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 163/408 (39%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL       KM K+L   I + + 
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQEA 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITT 308
              P   +    +I D  +  + + L+   + EID   K         + K  +A EI  
Sbjct: 241 ---PGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S       M + +++ KAG A +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKEGELPEDLPEIELSS---PEDMPVASVLNKAGLAKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + ++K++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGSVKVDGQVV-DRTFMLAL-----GETRVFQAGKKAFARITL 396


>gi|332673421|gb|AEE70238.1| tyrosine--tRNA ligase [Helicobacter pylori 83]
          Length = 402

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 188/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDEKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DTLGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+   + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ +
Sbjct: 295 KEDLAGEIVARYYDDEQAIKAKEQFSKVFGANL----LPEILL-ESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF +ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 350 IGFCSSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|261839409|gb|ACX99174.1| tyrosyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 402

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 102/418 (24%), Positives = 186/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDQKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DALGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRSYGLNKEQSVITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+   + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ +
Sbjct: 295 KEDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKRFMKLNI 401


>gi|255322539|ref|ZP_05363684.1| tyrosyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300447|gb|EET79719.1| tyrosyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 402

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 94/423 (22%), Positives = 169/423 (39%), Gaps = 37/423 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M   K            + ++ +   ++ L               G+D TA  LH GH  
Sbjct: 9   MSDIKKG----------VAEMIDEERIENLVKNYYEKGENFYVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +  LQK G     L+G  T  IGDPS + ++R+ +  + +  N +  +      + 
Sbjct: 59  VLQKMALLQKHGAIVQFLIGDFTGQIGDPSGKSQTRKKLDRETVVANAKTYEEQVFKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    ++ N  WL  +     + E+ S F+V RML  +    R K   S+S  EF 
Sbjct: 119 PQ----KTKLMFNSKWLNELGA-AGIVELTSTFAVARMLERDDFEKRYKSGASISISEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-AS 233
           Y +LQ YD V +     C ++MGG+DQ  N++ G  L        +   +  PLL     
Sbjct: 174 YPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRVYNVGKEQAVIMMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   I +      P + +    ++ D  +  + + L+     EI  +      
Sbjct: 230 VNKMSKSLGNYIGVT---DEPNDMFAKVLSVSDELMWRWYELLSEKSTEEIANLKA--DV 284

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              +A      E   +        +AA    +     +HSQ++    + + E+S  + ++
Sbjct: 285 ASGKAHPKAVKEALALEITARYNGEAAAKEAKAEFDRVHSQNLIPTEMDEFELSAPVWIV 344

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +   G   S+++ARR + +NA+ +N   I++E+L++        G   L  GK+    
Sbjct: 345 QALTHCGLCASSSQARRDIAANAVSLNQEKIADEQLKLGA------GEYVLQVGKRKFAK 398

Query: 414 CHL 416
             +
Sbjct: 399 LKV 401


>gi|294055488|ref|YP_003549146.1| tyrosyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614821|gb|ADE54976.1| tyrosyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 393

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 89/397 (22%), Positives = 158/397 (39%), Gaps = 22/397 (5%)

Query: 21  ISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           I    EL+        +   +G D T   L  GHL     L   Q  GH+ I ++G  T+
Sbjct: 14  IIGEAELEDRMHGNRPLRVKLGVDPTRPDLTFGHLVVFNKLRQFQDLGHEAILIIGDFTT 73

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPS R  +R ++  ++I EN +         +     +    ++ N  W   + + D
Sbjct: 74  LIGDPSGRSSTRPVLTKEQIVENAQTYLDQAFKILD----EHKTTVVYNSEWFNEMGFED 129

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            L+      +V RML  +    R      +S +EF Y ++Q YD + L    +  +++GG
Sbjct: 130 CLKLARKM-TVARMLERDDFAKRYANNAPISIIEFLYPLIQGYDSLIL----NADVEIGG 184

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  N++ G  L +     +   LT PLL       KM K+    I       SP + +
Sbjct: 185 TDQLFNMLVGRALQKDAGKQEQAVLTMPLLVGLDGVKKMSKSQDNYIAFT---DSPKDMF 241

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
               ++ D  + ++ + L  L   +ID++         +AKK +A+ +    H  ++A+ 
Sbjct: 242 GKIMSVSDDTMWTYYRLLLELDEEKIDKLKAGHPM---DAKKHLASSLVGQFHSMKDAKH 298

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
                 + F  +     MPT S S          L+ L+  +    S    RR ++   +
Sbjct: 299 ELEQFEQVFSKNKIPDDMPTFSWSDLAGDAEAAKLVDLMGASELFESKGAIRRLIQQGGV 358

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           K++    S+   +         G      GK+     
Sbjct: 359 KVDGDKQSDPNSEFSR----PNGEQIFQAGKRVFFKV 391


>gi|317180539|dbj|BAJ58325.1| tyrosyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 402

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 101/418 (24%), Positives = 186/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGT-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDQKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DTLGAKGMIELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+   + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  ++A KA     + F  ++    +P I + + +   G+G+L ++ +
Sbjct: 295 KEDLAGEIVARYYDNDQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKRFMKLNI 401


>gi|68483513|ref|XP_714317.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|68484079|ref|XP_714042.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|46435567|gb|EAK94946.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|46435873|gb|EAK95246.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
          Length = 501

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 126/458 (27%), Positives = 211/458 (46%), Gaps = 44/458 (9%)

Query: 2   PAFKSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
               +  L  L  R  I  I++    +L    S      Y G D TASSLH G+L  LM+
Sbjct: 46  TNPDNSLLEYLQSRHLIESITDDNLYKLTKRGSNHKFKLYCGADPTASSLHLGNLLPLMV 105

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   + +G+  + L+GG T ++GDPS R   R  +   E+++N+ KI+   S+F+  G  
Sbjct: 106 LLHFKMSGNDVVGLVGGATGLVGDPSGRKTERNKIDEVEVEDNVTKIQRQISTFLSNGIE 165

Query: 120 K------------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                         D   +NN +W  ++K ++ L   G    V+ ML+ +S++SRL+   
Sbjct: 166 YAKSRQFPMTEKVGDTTSVNNASWWENVKMLEFLATYGRHIRVSSMLARDSIQSRLESG- 224

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-----LKTPKLF 222
            + F EF Y ILQAYDF  L K+ +  +Q+GG+DQWGNI  GIDL  R      K  + +
Sbjct: 225 GIGFNEFTYQILQAYDFWHLYKDENVNMQVGGNDQWGNITAGIDLISRLKKFHGKKHEAY 284

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PLLTT+SG K GK+   A++++  +T+PY  +QY+ N+ D  V    K  T LP++
Sbjct: 285 GLTVPLLTTSSGEKFGKSAGNAVFIDSSLTTPYQMYQYFINVPDDIVGKLLKVFTLLPLN 344

Query: 283 EID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA--AMECFDMSIHSQHMP 337
            I+            +  A++++A E+  ++HG    ++ A     +        + ++ 
Sbjct: 345 VIEGELLPKHNSDPGLRIAQRVLAREVVDLIHGVGVGDEMAFITGFLFPTPDQPFNDNVS 404

Query: 338 TISI-------------SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK--INNS 382
              +             +K      + L  L+       S  E RR +K+  +   ++ +
Sbjct: 405 ADKLIENFKRSGILFKRNKPSPDEEIKLSALLADI-VGKSKGEMRRLIKAGGVYMGLDRN 463

Query: 383 IISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHLC 417
            I +    I             + +  GK+N+ +    
Sbjct: 464 QIEDPDDVILFDVDNHLIDGKLLLVRVGKQNYYVVEFV 501


>gi|255727496|ref|XP_002548674.1| hypothetical protein CTRG_02971 [Candida tropicalis MYA-3404]
 gi|240134598|gb|EER34153.1| hypothetical protein CTRG_02971 [Candida tropicalis MYA-3404]
          Length = 500

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 122/457 (26%), Positives = 217/457 (47%), Gaps = 46/457 (10%)

Query: 2   PAFKSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            +  +  L  L  R  +  I++    +L    S      Y G D TA SLH G+L  LM+
Sbjct: 45  TSSDTSLLEYLQSRHLVESITDDNLYKLTKRDSGQKFKLYCGADPTAESLHLGNLLPLMV 104

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   +  G+  + L+GG T ++GDPS R   R  +  +++ +N+ KI+   S+F+  G  
Sbjct: 105 LLHFRMRGNDVVGLVGGATGLVGDPSGRKTERNPLGGEQVDDNVSKIQNQISTFLSNGIE 164

Query: 120 KTD------------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                             +NN +W   +K ++ L   G    V+ ML+ +S+ SRL+   
Sbjct: 165 YAKSRQFPMTDSIGETTSVNNASWWADVKMLEFLATYGRHIRVSAMLARDSISSRLESG- 223

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLF 222
            + F EF Y ILQAYDF  L K+++  +Q+GG+DQWGNI  G+DL  R+     K  + +
Sbjct: 224 GIGFNEFTYQILQAYDFWHLYKDHNVNMQVGGNDQWGNITAGVDLISRIKKSFGKDKEAY 283

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            +T PLLTTASG K GK+   A++++ ++T+PY  +QY+ N+ D  V +  K  T LP++
Sbjct: 284 GVTVPLLTTASGEKFGKSAGNAVFIDSKLTTPYQMYQYFINVPDDIVGTLLKVFTLLPLN 343

Query: 283 EID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA-------MECFDMSIH 332
            I+            +  A++++A E+  ++HG    ++ A           + F+ ++ 
Sbjct: 344 VIEGELLPKHNSDPGLRIAQRVLAREVVDLIHGVGVGDEMAYITGFLFPTPDQPFNDNVS 403

Query: 333 SQHMPT--------ISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIK--INN 381
           +  +             +K      + L +++ +  G   S +E RR +K+  +   ++ 
Sbjct: 404 ADKLIENFKRSGILFERTKPAPEEEIKLSSILAEITG--KSKSEMRRLIKAGGVYMGLDR 461

Query: 382 SIISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICH 415
           + I +    I             + +  GK+N+ +  
Sbjct: 462 NQIEDPDDVILFDVDHHLIDGKLLLVRVGKQNYYVVE 498


>gi|317182086|dbj|BAJ59870.1| tyrosyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 402

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 187/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDQKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DALGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+   + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ +
Sbjct: 295 KEDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|315586560|gb|ADU40941.1| tyrosine--tRNA ligase [Helicobacter pylori 35A]
          Length = 402

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 102/418 (24%), Positives = 186/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDQKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DTLGAKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+   + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ +
Sbjct: 295 KEDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  ++ NE  +     F       +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVVKNESYR-----FVKGNY-VIQLGKKRFMKLNI 401


>gi|322785930|gb|EFZ12549.1| hypothetical protein SINV_80157 [Solenopsis invicta]
          Length = 404

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 128/404 (31%), Positives = 203/404 (50%), Gaps = 24/404 (5%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
           E+  L +      Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +IGDPS
Sbjct: 2   EIVDLLNNSPQCVYAGFDPTADSLHVGNLLVLMNLLHWQRAGHQVIALVGGATGLIGDPS 61

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK---------TDALMLNNETWLCSIK 136
            R   R  M    I+ENI+ I     +                    +++NN  W  ++ 
Sbjct: 62  HRKSERVEMERYLIEENIKSITKNIETIFNNHQEYFWKNKETALKPLIIVNNLDWYTNVN 121

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            I+ +R IG +F +  ML   SV+SRL  +  +SF EF Y + QAYD+++L K Y CR Q
Sbjct: 122 VIEFIRSIGKYFRMGTMLGRTSVQSRLNSDTGMSFTEFTYQVFQAYDWLQLMKKYKCRFQ 181

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
           +GGSDQ GNI+ G DL  +    +++ +T PL+T   G K GK+L  A+WL+   +SP+ 
Sbjct: 182 IGGSDQMGNIMSGYDLITKSMRKEVYGITLPLITAEGGKKFGKSLLNAVWLSSTKSSPFQ 241

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGRE 314
            +QY+    D+DV  F K  T +P+++I+ + K    +     A+K++A ++T +VHG +
Sbjct: 242 LYQYFIRAKDSDVEKFLKLFTFIPLNKIEEIVKSHMNDPERRRAQKLLAEQVTLLVHGED 301

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI-----------VKAGFAT 363
               A  A+   +D SI S  +   ++   +V  G  ++ ++            KA    
Sbjct: 302 GLLAAKRASAALYDKSIESF-VRLNALELTDVFEGATIVDILSEPGITVYELAKKANCFK 360

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSF 406
           S ++A R + +    +N+  I+N    I       S     L  
Sbjct: 361 SDHDAERIITAGGFYVNHQKITNLNEVIVPGIHILSNNLSLLRV 404


>gi|320451146|ref|YP_004203242.1| tyrosyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151315|gb|ADW22693.1| tyrosyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 434

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 98/433 (22%), Positives = 169/433 (39%), Gaps = 42/433 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    I     L  L     +   +G D T   LH GH   L  +   Q+ GHK +
Sbjct: 16  LLKRGAEEIIPEEELLLKLKEGRPLVVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVV 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T +IGDPS R ++R  +  +E +EN           ++         +  N  W
Sbjct: 76  LIIGDFTGMIGDPSGRSKTRPPLTLEETRENARTYVEQAGKILRQEPHL--FELRYNSEW 133

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + + +++R      +V +ML  E  + R +    +S  EF Y   QAYD V +    
Sbjct: 134 LEGLTFKEVVRLTSLM-TVAQMLEREDFKKRYEEGIPISLHEFLYPFAQAYDSVAIR--- 189

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              ++MGG+DQ  N++ G ++      P   A   PLL       KM K+L   I + + 
Sbjct: 190 -ADIEMGGTDQKFNLLVGREVQRAYGQPPQVAFLMPLLVGLDGREKMSKSLDNYIGVAEP 248

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI--------- 301
              P   ++    + DA + S+ + LT L  +EI  + K      +              
Sbjct: 249 ---PEVMFKKLMWVPDALLESYFRLLTDLEEAEIQTLLKAGPVPAHRVLARLLTAAYALP 305

Query: 302 -------------IATEITTMVHGREEAEKAATAAMECFD---MSIHSQHMPTISISKDE 345
                        +      +   +E   +A   A   +D        +++P + I   E
Sbjct: 306 TIPARIDRAFYESLGYSFEALGKDKEAGPEAVRQAEARYDQVAKGAIPENIPEVVIPASE 365

Query: 346 VSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G + +  L   AG   S  EARR +++  ++++  +I +  L++ L          L
Sbjct: 366 LKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGELIEDAGLEVDLS-----RPRIL 420

Query: 405 SFGKKNHIICHLC 417
             GK   +   L 
Sbjct: 421 QRGKDRFVRVRLA 433


>gi|302306768|ref|NP_983140.2| ABR192Wp [Ashbya gossypii ATCC 10895]
 gi|299788677|gb|AAS50964.2| ABR192Wp [Ashbya gossypii ATCC 10895]
          Length = 461

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 136/438 (31%), Positives = 202/438 (46%), Gaps = 34/438 (7%)

Query: 8   FLSILSERGFIHQISNP--RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  L  RG + QIS P    +  L        Y G D TASSLH G+L  LM+L     
Sbjct: 28  VLDELRARGLVQQISEPVDALVQQLREGKRPRLYCGADPTASSLHLGNLMPLMVLLHCYV 87

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD--- 122
            GH  ++L+GG T ++GDPS R   R  +      EN+ +I G F  F + G        
Sbjct: 88  RGHDVVALIGGATGMVGDPSGRSTERTALADATRLENVRRISGQFKRFFENGREYHGSRV 147

Query: 123 -------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                  A+++NN  W   +  +D L   G    V  ML  +SV +RL     + F EF+
Sbjct: 148 APAQSGHAVVVNNVEWWKDMGLLDFLARYGRHIRVQNMLGRDSVSARLSSGSGMGFNEFS 207

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLLTT 231
           Y ILQAYDF  L  ++   +Q+GG DQWGNI  GIDL  RL         F +T PLL T
Sbjct: 208 YQILQAYDFYHLHTHHGVAIQVGGGDQWGNITAGIDLIGRLSPGAAANPAFGVTVPLLLT 267

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           ASG K GK+   A++++  +T  Y  +Q++ N  DADV  F +  T LP+S ID      
Sbjct: 268 ASGAKFGKSAGNAVFVDPVITPSYQLYQFFVNTSDADVARFLRLFTMLPLSAIDEAVAAH 327

Query: 292 G--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
               +   A++++A E+  ++HG    + A T +   F        +P   + +     G
Sbjct: 328 TVAPQRRLAQRLLAREVVDLLHGLGHGKDAETVSDVLF--GGARVDLPAGELLRLFTDAG 385

Query: 350 M--------GLLTLI-VKAGFATSTNEARRHLKSNAIKI--NNSIISNEKLQIKLQDFDS 398
           +         L+ L+ +  G  +S  EARR L   A+ +  + S  + +   +       
Sbjct: 386 ILREAPRSASLVDLMCLATG--SSRAEARRKLVQGAVYLGPDRSRPAQDIADLSP-HMIE 442

Query: 399 TGNIKLSFGKKNHIICHL 416
              + L  GK+   + H+
Sbjct: 443 DRVLLLRIGKQQCYVFHI 460


>gi|237751118|ref|ZP_04581598.1| tyrosyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373563|gb|EEO23954.1| tyrosyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 415

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 184/415 (44%), Gaps = 33/415 (7%)

Query: 13  SERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            ERG +  I     ++ L               G+D TA  LH GH   L  L   Q  G
Sbjct: 21  IERGCVEFI-GKEYIESLVTRFYEKGEEFIVKAGFDPTAPDLHLGHSVLLQKLATFQNYG 79

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            +   L+G  T+ IGDPS + E+R+ +  +E+ +N +  +      +          +  
Sbjct: 80  GRVKFLIGDFTATIGDPSGKSETRKPLTFEEVAQNAKTYEEQVFKILNKD----KTDICF 135

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  ++++ ++ + +SV RM+  +    R K  Q +S +EF Y +LQ YD V L
Sbjct: 136 NSKWLGSLTSVNIM-QLTAQYSVARMMERDDFTKRFKENQPISIVEFMYPLLQGYDSVAL 194

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKMGKTLSGAI 245
               +C +++GG+DQ  N++ G  L        +   +T PLL       KM K+L   I
Sbjct: 195 ----NCDIELGGNDQKFNLLVGRALQRAYNCGKEQSVMTMPLLEGLDGVNKMSKSLKNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            +     SP + +    +IDD  +  + + ++T  ++EI ++ +            K+ +
Sbjct: 251 GVT---DSPNDMYAKILSIDDTLMWRYYELISTKSLAEIAKLKRGVETGELHPKAVKEEL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           + EITT  H    A +A  A    F      +      I   E+ +G  +  ++V+ GF+
Sbjct: 308 SLEITTRFHNESLAIQAKEAFNAIFSNKEIPKD-----IETKEIQKGEWICKVLVELGFS 362

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ST++ARR +K+ A+ I+ +  ++E        F   G   +  GK+      + 
Sbjct: 363 PSTSQARRDIKAGALSIDQAKQTDENF-----HFLQEGEFIIKLGKRKFAKIIIV 412


>gi|42522726|ref|NP_968106.1| tyrosyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|81617882|sp|Q6MNQ2|SYY_BDEBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39573922|emb|CAE79099.1| tyrS [Bdellovibrio bacteriovorus HD100]
          Length = 405

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 93/400 (23%), Positives = 165/400 (41%), Gaps = 26/400 (6%)

Query: 16  GFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           G    I++   L  L     ++  +   +G D T   +H GH   +  L   Q  GHK  
Sbjct: 14  GTADFINDEDMLKKLKRSIETKKPLNIKLGADPTRPDIHLGHTVVINKLKTFQDLGHKVS 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T++IGDPS ++ +R M+  +EI+EN           +          ++ N +W
Sbjct: 74  FLIGDFTAMIGDPSGKNSTRPMLTREEIEENGRSYAKQIFKILDP----EKTEIVYNSSW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   + +     + +V ++L  E    R +    +   EF Y + Q YD V L    
Sbjct: 130 IMKMTPAEFITMTSKY-TVAQLLEREDFTKRYRSGTPIGIHEFIYPLTQGYDSVALK--- 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  +           LT P+L       KM K+L   I +   
Sbjct: 186 -TDVELGGTDQKFNLLVGRAMQAAYGMEAQCVLTMPILEGIDGVNKMSKSLDNYISVV-- 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATEIT 307
             +P + +     I D  +  + + LT +  + ++++        K     K  +A  + 
Sbjct: 243 -DTPKDMFGKTMRISDELMYRWYELLTDVGAAGLNQLRADVAEGRKHPRTVKVELAKFLI 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H + EA+ A       F        +P   +   E    MGL  L+VKA  A S +E
Sbjct: 302 KRFHSQAEAQAAEDEFNRIFVEKGLPDEVPDFEV---EAETQMGLAALMVKAQLAASNSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           A R ++   ++I+   +S+ +L+I   D  S  +  L  G
Sbjct: 359 AGRLIQGGGVQIDGEKVSDPRLKI---DLKSGASFVLKAG 395


>gi|320108846|ref|YP_004184436.1| tyrosyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319927367|gb|ADV84442.1| tyrosyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 417

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 101/420 (24%), Positives = 176/420 (41%), Gaps = 33/420 (7%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  +G    I        +     S   +    G+D TA  LH GH   +  L   Q+ 
Sbjct: 15  DLITKGAAEIIPVDDLTRRIEASIASGTPMRIKAGFDPTAPDLHLGHTVLMRKLRHFQQL 74

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ + ++R+ +  ++I  N E  +      +          + 
Sbjct: 75  GHQVIFLIGDFTALIGDPTGKSQTRKPLTREQIALNAETYQEQVFKILDRD----KTEVR 130

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  ++Y +    + + F++++M+  E    R   E+ ++  E  Y ++Q YD V 
Sbjct: 131 YNSEWLGELRY-EDTIRLMAQFTLSQMIEREEFHKRFNAEEPIALHELMYPVMQGYDSVA 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       +++GG+DQ  N++ G DL           LT P++       KM K+L+ AI
Sbjct: 190 LK----SDVELGGTDQKFNLMRGRDLQRHFGQQPQIVLTMPIIEGLDGVQKMSKSLNNAI 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKII 302
            + +    P++ +     + D  +  +   LT LP S+ID              +AKK +
Sbjct: 246 GVTEA---PFDMFTKLMQVSDELMWKYYTFLTDLPQSQIDALREQVAAGTLHPMQAKKDL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-----SRGMGLLTLIV 357
           A  IT   H  E A++A       F     S     I++ K E+        + +  L+V
Sbjct: 303 ARTITAGFHTAEAAQRAEENWSTQFQKGGVSDDTERITVPKSELGVETEPLSLNVDRLLV 362

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG A S  EARR     A++I+ ++I   +  +          + +  GK+      L 
Sbjct: 363 TAGLANSMGEARRKRSEKAVRIDEAVILEPRYALVTDPV----TLTVRLGKR----VKLV 414


>gi|254572493|ref|XP_002493356.1| Mitochondrial tyrosyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238033154|emb|CAY71177.1| Mitochondrial tyrosyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328352627|emb|CCA39025.1| tyrosyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 494

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 135/445 (30%), Positives = 223/445 (50%), Gaps = 36/445 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+ L +RG + Q ++  EL  LCS+  ++ Y G D +A SLH G+L  LM+L      G
Sbjct: 47  ILNHLKKRGLLSQCTHEPELSQLCSKRRLSLYCGADPSARSLHIGNLLPLMVLLHFNLRG 106

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----------- 116
           H    L+GG T  +GDPS R+  R  ++ +E + N+E I+    SF +            
Sbjct: 107 HNIFPLVGGATGKVGDPSGRETERTEIQHEERESNVENIRKQMKSFFRRGVTFAHRRNQL 166

Query: 117 --GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                    ++ NN  W  +I+ +D L   G F  VN+ML+ ES++ RL     + F EF
Sbjct: 167 FKDVEPGTQMLKNNIEWWENIRILDFLSTYGKFIKVNQMLARESIKKRLNSGMGIGFNEF 226

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---------LFALT 225
            Y ILQA+DF  L KN++ ++Q+GG+DQ+GNI+ GID   RL   K          F +T
Sbjct: 227 TYQILQAFDFFVLYKNHNVQIQVGGNDQYGNIVAGIDFISRLHRNKADNAVHAPGAFGIT 286

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTT++G K GK+   A++++K MT  Y  +QY  N+ D DV  F  + + LP+S ID
Sbjct: 287 VPLLTTSTGEKFGKSAGNAVFIDKYMTPSYQLYQYMINLSDGDVERFLNKFSLLPLSVID 346

Query: 286 RM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++     Q K+    +KI+A E+  ++HG+ E       +   F   ++   +  +   +
Sbjct: 347 KIVLKHKQNKKQRIGQKILAVELCDLIHGQGEGISNLIISETLFGGFLNFNTLEILEAFR 406

Query: 344 DE---------VSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKIN--NSIISNEKLQI 391
            +         +   + +L ++        S  E ++ +K  ++ +   N+ I +  L+I
Sbjct: 407 KQGLLKTYKACMIENLSILNVLEDIYRQQKSRTELKKLIKGGSVSLGVKNTRIFDSDLRI 466

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHL 416
           K  D      I +  GKK++ +  +
Sbjct: 467 KPDDALDGKLILIRVGKKDYHVIEV 491


>gi|307720660|ref|YP_003891800.1| tyrosyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978753|gb|ADN08788.1| tyrosyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 399

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 99/420 (23%), Positives = 178/420 (42%), Gaps = 35/420 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + L  +  RG   +I +   ++ L               G+D TA  LH GH   L  L 
Sbjct: 4   EALREI-NRGC-AEIIDNERIEKLLKAYFQEGKTYMVKAGFDPTAPDLHLGHTVLLQKLA 61

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             QK G +   L+G  T+ IGDP+ ++ +R+++  ++I +NIE         +     ++
Sbjct: 62  TFQKYGARVQFLIGSFTATIGDPTGKNATRKVLSKEDIIKNIESYTTQAFKILD----ES 117

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N+ WL  +     L  + S  +V RML  +    R K   +++  EF Y +LQ 
Sbjct: 118 KTDIVYNDDWLGKMSA-SDLISLASNLTVARMLERDDFSKRFKTNVAIATSEFMYPLLQG 176

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL-TSPLLTT-ASGTKMGK 239
           YD V L       +++GG+DQ  N++ G  L +     K  A+   P+L       KM K
Sbjct: 177 YDSVYLK----SDIEIGGTDQKFNLLMGRQLQKAYDIKKQQAVLMMPILEGLDGVQKMSK 232

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I ++     P + +    +I D  +  + + L+   + EI  +     +      
Sbjct: 233 SLGNYIGVS---DKPNDMFGKVLSISDELMWRYFELLSDKSLDEIAELETAVKEGKLHPK 289

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K+ +A EIT   H +E AE A     +    S     +   S         + +   +
Sbjct: 290 KVKEDLALEITARFHSKEVAENAKVEFDKVHSKSQIPSDIAEFS-----CDGPIWIAKAL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++     ST++ARR +K   +KI+   +S++KL++        G   L  GK+      +
Sbjct: 345 LECNMEPSTSQARRDIKQGGVKIDQEKVSDDKLELSS------GEYLLQVGKRKFAKLKV 398


>gi|66815010|ref|XP_641614.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74897218|sp|Q54WD9|SYYM_DICDI RecName: Full=Probable tyrosyl-tRNA synthetase, mitochondrial;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|60469643|gb|EAL67632.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 482

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 135/453 (29%), Positives = 225/453 (49%), Gaps = 46/453 (10%)

Query: 5   KSDFLSILSERGFIHQIS--NPRELD-------------ILCSQGVVTAYIGYDLTASSL 49
           K++ ++IL +RGFIHQ++  +   +                 +   V+ Y G+D TA SL
Sbjct: 36  KNNVINILKKRGFIHQMTASDIEMIKMTSTNNNNNNDNNNNNNNNKVSLYAGFDPTADSL 95

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H G+L  LM++   ++ GH PI+LMGG T++IGDPS +   R M+  + I+ N++ I+  
Sbjct: 96  HIGNLLTLMVMLHFKRHGHNPIALMGGATALIGDPSGKSSDRVMLTEEFIEGNLKHIREN 155

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR--LKREQ 167
            ++ +       D L++NN  W  ++  I  LRE+GS+F V  M+  + +++R     E 
Sbjct: 156 ITAVL-----GEDTLVVNNIEWNKTMDVISFLREVGSYFRVGSMIKKDFIQNRLSDSNEN 210

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +SF EF Y + QA DF  L   + C +Q+GGSDQWGNI  G DL  +        +T P
Sbjct: 211 GISFTEFCYSLFQANDFAHLFLKHGCSIQIGGSDQWGNITAGCDLIRKKLKGNAQGITIP 270

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID-- 285
           LLT ++G K+GK+   +IWL+   TSPY F+QYW  + D DV    K  T +P+ EI   
Sbjct: 271 LLTNSAGKKLGKSEGNSIWLSPHRTSPYKFYQYWIQVSDEDVERLLKLFTLIPLEEISIL 330

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM-------------------EC 326
                +   +   +K IA  +T ++HG++  E+A                          
Sbjct: 331 VQKHNENPHLRLGQKTIAEHVTRLIHGQKGVEEALNTTELLFGESNKLLTPNASTTKIGD 390

Query: 327 FDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           FD+      +  I + + +   ++   +L L  +     S ++ ++ L+S +I +NN  +
Sbjct: 391 FDIGYLLSRVNFIELERSKFVDNQTEPILNLFAQIS-DASKSKVKQLLQSKSIYLNNIPV 449

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++    I+  D  +   I L  GKK + +    
Sbjct: 450 ASNSQFIQSSDLIANDFIYLKSGKKIYYLIKFI 482


>gi|75907148|ref|YP_321444.1| tyrosyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|115305796|sp|Q3MEN7|SYY_ANAVT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|75700873|gb|ABA20549.1| tyrosyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 398

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 89/398 (22%), Positives = 166/398 (41%), Gaps = 26/398 (6%)

Query: 22  SNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           S+   L+     +   +    G D T + +H GH   +  L   Q  GH  + ++G  T+
Sbjct: 24  SDIESLEKRLATTDRPLRVKYGIDPTGADIHLGHSIPMRKLRGFQDAGHTAVLIIGDFTA 83

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ + E RR +  +++++N +         + + T      +  N  WL  +    
Sbjct: 84  RIGDPTGKSEMRRQLTEEDVKQNAQTYLDQVRPILDFDTP-GRLEVRYNSEWLSRLDLGK 142

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +   + +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +    +  +++GG
Sbjct: 143 ITELLATM-TVGQMLAKEGFADRYKKENPIFLHEFLYPLMQGYDSVAI----EADVELGG 197

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  NI  G DL         F +  P+L  T    KM K+L   + L++    P   +
Sbjct: 198 TDQKFNIAVGRDLQRHFGQKPQFGVLLPILIGTDGVQKMSKSLGNYVSLSEH---PGQKY 254

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           Q  + + D  +  + + LT LP+ ++            + + ++A EI    HG + A++
Sbjct: 255 QKLQGVPDQMLEQYFELLTDLPIDKLPA-------NPRDRQMLLAWEIVKQYHGEQAAQE 307

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A     E          +P  S++       + L  L+   G   ST E +R ++   ++
Sbjct: 308 A----KEAAQSGGKEGAVPEFSLAGVP-QFPVKLAYLLGATGLCKSTGEGKRKIQEGGVR 362

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++   IS+     +  D        L  GK   +   L
Sbjct: 363 LDGDRISDADTIFQQPDELQGR--VLQVGKNKFVRLVL 398


>gi|89099473|ref|ZP_01172349.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085859|gb|EAR64984.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 415

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 99/406 (24%), Positives = 174/406 (42%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             +   +EL    ++       +   +G D +A  +H GH   L  L   Q+ GH    +
Sbjct: 28  QDVVPLQELKNKIAKSLFLGKPLKVKLGLDPSAPDVHLGHTVVLNKLKQFQENGHTIQLI 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E++ N E     F   +  G     A +  N  WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLNDEEVKHNAETYFEQFGKVLDMG----KAELHYNSKWLS 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++   G   +V R+L       RL   + +S  EF Y ++Q YD V L    + 
Sbjct: 144 ALHLQDVIELAGK-ITVARLLERNDFSERLGAGKPISLHEFFYPLMQGYDSVML----ES 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L E     K   +  PLL       KM K+ +  I ++++  
Sbjct: 199 DIELGGNDQHFNVLMGRHLQEHYGKEKQVVILVPLLEGLDGKEKMSKSKNNYIGVDEK-- 256

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTM 309
            P + +    +I D  +  + +  T+LP++E        +       +AK  +A  I +M
Sbjct: 257 -PEDMYGKAMSIPDELMEKYFRLATSLPLAEKMSIQEKLEEGSLHPRDAKMQLARTIVSM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E AEKA       F      + MP ++    +      LL L++ AGF  S +EAR
Sbjct: 316 YHGHEAAEKAEDHFKSVFQQGSMPEDMPALTWDGSD---EPDLLELLMFAGFFPSRSEAR 372

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + +  +++N     +   ++ LQ       + L  GK+      
Sbjct: 373 WMVLNGGVRMNGEKAEDINTKVSLQ-----AELILQVGKRKFARIK 413


>gi|313682974|ref|YP_004060712.1| tyrosyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155834|gb|ADR34512.1| tyrosyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 400

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/423 (24%), Positives = 175/423 (41%), Gaps = 35/423 (8%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLM 58
              + L  +  RG   +I +   ++ L           T   G+D TA  LH GH   L 
Sbjct: 1   MIQNALREIK-RGT-AEIIDEARIETLLKNYFEKGENYTVKAGFDPTAPDLHLGHTVLLQ 58

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   QK G     L+G  T+ IGDP+ + E+R+ +   ++ EN +  K      +    
Sbjct: 59  KLSVFQKFGAHIQFLIGDFTAQIGDPTGKSETRKKLLPAQVLENAQSYKDQVFKILDP-- 116

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 ++ N  W+ +      + E+ + ++V RML  +    R K   S+S  EF Y +
Sbjct: 117 --EKTTVVFNSEWI-NPLGAAGMLELTTTYNVARMLERDDFDKRYKGGISISISEFLYPL 173

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTK 236
           LQ YD V L       +++GG+DQ  N++ G  L    +   +   L  P+L       K
Sbjct: 174 LQGYDSVHLK----SDIEIGGTDQKFNLLMGRHLQRVYEIGKEQAVLMMPILEGLDGVQK 229

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--- 293
           M K+L   I + +    P + +    +I D  +  + + L+   + EID +         
Sbjct: 230 MSKSLGNYIGVVEA---PNDMYGKVLSISDTLMWRYYELLSAKSLDEIDVLKTGVENGTL 286

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              + K+ +A EIT   H  E AE A          S     M   S+        + + 
Sbjct: 287 HPKKVKEALAIEITARFHSAEAAEGAHAEFERVHAQSEIPSEMDEFSL-----EGPIWIA 341

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V    + ST++ARR +K  ++KI+ + +S+E+ Q++       G   L  GK+    
Sbjct: 342 KALVDCSLSPSTSQARREIKQGSVKIDQNKLSDEQYQLEA------GEYILQVGKRKFAR 395

Query: 414 CHL 416
             +
Sbjct: 396 LKV 398


>gi|291276822|ref|YP_003516594.1| tyrosyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964016|emb|CBG39855.1| tyrosyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 402

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/425 (25%), Positives = 181/425 (42%), Gaps = 33/425 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNP---RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQ 56
           M     + +  L  RG +  I        +    + G       G+D TA  LH GH   
Sbjct: 1   MAIGLQEAMQELK-RGSVEFIGEEYIKELVQKYLTNGDRFIVKAGFDPTAPDLHLGHTVL 59

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  L   QK G     L+G  T+ IGDPS + E+R+ +  +E+ +N    +      +  
Sbjct: 60  LQKLATFQKFGGSVKFLIGDFTARIGDPSGKSETRKPLSPEEVLQNARTYQEQVFKVLDP 119

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   +  N  WL  +   + +  + S FSV RML  +    R K  Q +S +EF Y
Sbjct: 120 CF----TEVCFNSKWLAELGA-EGMITLTSHFSVARMLERDDFEKRYKSNQPISMVEFMY 174

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASG 234
            +LQ YD V L    +  +++GG+DQ  N++ G  L        +   +T PLL      
Sbjct: 175 PLLQGYDSVAL----ESDIELGGNDQKFNLLMGRSLQRAYGLKKEQSIMTVPLLEGLDGV 230

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQ 291
            KM K+L   I + ++  + Y       +I D  +  + + L+   + E   + +  + +
Sbjct: 231 QKMSKSLKNYIGVTEDSQTMYA---KIMSISDELMWKYYELLSAKSLQEISQMQKNVESE 287

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
                 AK+++A EITT  H +E A+ A       F  +   + M T+     E   G  
Sbjct: 288 VLHPKLAKELLALEITTRYHNQELAQDAKEVFDNVFSKNHLPKDMDTM-----EFGVGEW 342

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  ++V A    ST++ARR +++ AIKIN   +++E  +    D        +  GK+  
Sbjct: 343 ICKVLVDAKICPSTSQARREIRAGAIKINQQKLADENHKFAQGD------YIVQMGKRKF 396

Query: 412 IICHL 416
           I   +
Sbjct: 397 IRIVI 401


>gi|317178865|dbj|BAJ56653.1| tyrosyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 402

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 186/418 (44%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L      +        G+D TA  LH GH   +  L  L
Sbjct: 9   LKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +         
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDQKH----T 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWL-DTLGTKGIIELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTL 241
            V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L
Sbjct: 182 SVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +    P   +    ++ D  +  +   L+   + EI+ +      Q       
Sbjct: 238 GNYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ +
Sbjct: 295 KEDLAGEIVARYYDNEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  +I NE  +     F       +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQKVIKNESYR-----FVKGNY-VIQLGKKRFMKLNI 401


>gi|52079102|ref|YP_077893.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52784468|ref|YP_090297.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647125|ref|ZP_08001350.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. BT1B_CT2]
 gi|81666957|sp|Q65MW0|SYY2_BACLD RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|52002313|gb|AAU22255.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346970|gb|AAU39604.1| TyrZ [Bacillus licheniformis ATCC 14580]
 gi|317390772|gb|EFV71574.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. BT1B_CT2]
          Length = 417

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 172/406 (42%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDI-----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            ++  P EL       + +   +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 29  EEVIPPEELRAKLAKSILTGEPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 88

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E++ N E     F   +     +    +  N  WL 
Sbjct: 89  IGDFTGKIGDPTGKSAARKQLTDEEVRRNAETYFQQFGKVLD----QNKVELHYNSKWLK 144

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +   + + E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    D 
Sbjct: 145 RLTL-EDVIELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----DS 199

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    E+    K   +  PLL    G  KM K+ +  I ++++  
Sbjct: 200 DIELGGTDQHFNVLMGRHFQEKYGKEKQVVILMPLLEGLDGIEKMSKSKNNYIGIDED-- 257

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
            P+  +    ++ D+ +  +    T L   E  R+ K          +AK ++   I  M
Sbjct: 258 -PHEMFGKTMSLPDSLMKKYIHLATDLEAEEKKRLVKDLETGAVHPRDAKMLLGKTIVNM 316

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A     + F  +    ++  +     +    + +  L+V      S +EAR
Sbjct: 317 YHGSKAAEAAEQQFKKVFQQNSAPDNITAVH---WQGGGTVPVTDLLVTLELLPSKSEAR 373

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  +KIN +   +    I L+       + +  GK+  +   
Sbjct: 374 RMIQNGGVKINGAKAESIHADIALEH-----GMIIQVGKRKFVKLQ 414


>gi|97202387|sp|Q8D2L6|SYY_WIGBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 426

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 133/421 (31%), Positives = 221/421 (52%), Gaps = 11/421 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             D +  L  R  I ++++   +  +  +  +  Y G+D TA SLH GHL  L+ L    
Sbjct: 1   MKDLIQELKNRKLISKLTDEINIKKILKEKKINLYCGFDPTADSLHIGHLIPLLFLKRFS 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI ++GG T+++GD + +     + + + ++   + I+    + IKY     + +
Sbjct: 61  NFGHIPIIVIGGATALLGDFNIKKNKSFLEKYKNVKNWSKTIENQILNIIKYENNNCNLI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W+  +K I+ LR+IG F S+N++L  E V+ +LK  Q +SF+EF+Y +LQ YD+
Sbjct: 121 ILNNYLWIKELKIINFLRDIGRFISINKILRKEIVKKKLKENQHISFMEFSYSLLQGYDY 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT--LS 242
             L  NYD  +Q+GGSDQW NII GIDL  ++   K++ +T+PLLT ++G+K+GK+    
Sbjct: 181 YFLNLNYDVYIQIGGSDQWSNIISGIDLVNKINKKKVYGITTPLLTRSNGSKLGKSDDKE 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             IWL+K+ TS Y F+Q+W N  D  +  + K  T + MSEI+++      +     +A+
Sbjct: 241 KVIWLDKKKTSVYEFYQFWLNTPDEKIFRYLKLFTFISMSEINKLKCKFFNKEINPFQAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           KI+A EIT +VHG  +   A  A    F   I    +          I          + 
Sbjct: 301 KILADEITKIVHGISQLRLAQKATNFLFYKKISELSIEDFYLLSTSGIKIYYPKSNENIK 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V +  + S N A+  + S++I+INN    +     K +D        +  GKK+  +
Sbjct: 361 DILVNSKLSKSKNNAKSVILSSSIRINNKKQKSIDFMFKKEDKLFNLFTLIKKGKKDFCL 420

Query: 414 C 414
            
Sbjct: 421 L 421


>gi|149178799|ref|ZP_01857380.1| tyrosyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842340|gb|EDL56722.1| tyrosyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 407

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 183/416 (43%), Gaps = 28/416 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L+IL  RG + +I   +EL             +    G D T   LH GH   +  +   
Sbjct: 10  LAILR-RG-VEKIVPEQELAEKLKWSRETGTPLRVKYGIDPTGIDLHLGHTVPMRKMRQF 67

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ + ++G  T+++GDPS RDE+R  + +++++ N           I       +A
Sbjct: 68  QELGHQAVIIIGNYTALVGDPSGRDETRARLTAEQVEANAVDYLNQVGKVIDL----ENA 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N  W   + +   + E+ S  +V ++L+ +    R + E ++   E  Y I+QA+D
Sbjct: 124 EVVRNGDWFSKMNF-AAILELCSKVTVAQLLTRDDFSKRYREEAAIYLHECLYPIMQAWD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLS 242
            VE+       +++GG++Q  + +   DL +     +  ++ SP+L  T    +MGK+L 
Sbjct: 183 SVEIK----ADIELGGTEQLYSFMLARDLQKDQGLRQQVSVMSPILVGTDGVRRMGKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
             I +++   SPY   + +  + D  +  F + LT  P+ E+  +         EAK  +
Sbjct: 239 NYIGISE---SPYEMMKKFMQLSDDSMQMFYELLTDFPLDEVQTILAGHP---KEAKVKL 292

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAG 360
           A  I    H    AE++A             + +P   IS+ E++    +    L+ + G
Sbjct: 293 AKTIIAEYHDTAAAEESADRWQREIGSGGLPEDIPVAKISRSELNEDGTLPAANLLKQLG 352

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              ST++ARR ++    K+    +   K++   Q       + L  GKK      L
Sbjct: 353 LCASTSDARRSIQQGGAKMGEEKV---KIETHDQAIAVESGMLLWVGKKRFCQVEL 405


>gi|260553758|ref|ZP_05826028.1| tyrosyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405062|gb|EEW98562.1| tyrosyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 410

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 174/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 238 KSLGNYIGVF---DAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E A  A  +A          +  P ++IS+ E    + + T++
Sbjct: 295 EVKRILALELVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISRGEFGGEIFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ +++ +    +K       G   +  GKK      
Sbjct: 355 RVAGLNPNAAAAKDAVARGAVKVDWNVV-DAGFSVKE-----NGTFIIQSGKKAIARVT 407


>gi|146296490|ref|YP_001180261.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410066|gb|ABP67070.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 396

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/393 (25%), Positives = 181/393 (46%), Gaps = 28/393 (7%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L     +   +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + 
Sbjct: 26  KLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKS 85

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E+R+ +  +E+Q+N E  K      +          +  N  WL  + ++D++  + S +
Sbjct: 86  ETRKQLTKEEVQKNAEPFKEQVLKILDPQ----KTTIRYNSEWLEPMNFLDVI-NLASKY 140

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ 
Sbjct: 141 TVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILM 196

Query: 209 GIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           G  L +   +   ++  L   L+ T    KM K+L   I +N+    P   +    +I D
Sbjct: 197 GRTLQKEYGSKTIQVALLMPILVGTDGVNKMSKSLGNYIGINEP---PNIMYGKVMSIPD 253

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAA 323
             ++S+ +  T L   EI+ M +   +      +AK  +A EI  + HG E A+KA    
Sbjct: 254 EIMISYYELTTDLEPEEIEEMKRKLEEGTLHPRDAKMRLAREIVKLYHGEEAAKKAEEEF 313

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           +  F        +P + ++  +V     L   +V+    +ST+E  R +KS A+K+N   
Sbjct: 314 IRVFQKKDVPDDIPEVELANAKVY----LPRFMVENKLCSSTSEGMRLIKSGAVKLNGEK 369

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++   ++++  D        L  GK   +   L
Sbjct: 370 VNELDIELQNGD-------VLQVGKLKFVKVKL 395


>gi|311070362|ref|YP_003975285.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310870879|gb|ADP34354.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 414

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 94/408 (23%), Positives = 170/408 (41%), Gaps = 29/408 (7%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            ++  P EL    ++       +   +G D +A  +H GH   L  L   Q+TGH    L
Sbjct: 26  QEVIPPEELRTKIAKSVATGMPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQETGHIVQLL 85

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +     K    +  N  WL 
Sbjct: 86  IGDFTGKIGDPTGKSTARKQLTDEEVQHNAKTYFEQFGKVLD----KEKVELHYNSKWLK 141

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +   + + E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 142 ELNL-EDVIELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 196

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER K  K   +  PLL       KM K+    I +++   
Sbjct: 197 DIELGGTDQHFNVLMGRHFQERYKKEKQVVILMPLLEGLDGVEKMSKSKHNYIGIDEN-- 254

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + +  R+ K          +AK  +   I  M
Sbjct: 255 -PNDMYGKTMSLPDSLMKKYIHLATDLELEDKKRLVKDLETGALHPRDAKMFLGKTIVRM 313

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E AE A       F  +   + + T+    D+      ++ L+V      S +EAR
Sbjct: 314 YHGEEAAEAAEQQFKRVFQQNSLPEDIATVHWKGDQT---TPIIDLLVTLELLPSKSEAR 370

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R +++  +KIN     N        D      + +  GK+  +   + 
Sbjct: 371 RMIQNGGVKINGEKAENIHA-----DIQVLPQMTIQVGKRKFVRLTVS 413


>gi|184159979|ref|YP_001848318.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155371|ref|YP_002317416.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215481775|ref|YP_002323957.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239503896|ref|ZP_04663206.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|260558106|ref|ZP_05830317.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347692|ref|ZP_07228433.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301513278|ref|ZP_07238515.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301596725|ref|ZP_07241733.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332854727|ref|ZP_08435514.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332867406|ref|ZP_08437584.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332873321|ref|ZP_08441276.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|183211573|gb|ACC58971.1| Tyrosyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213054531|gb|ACJ39433.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986874|gb|ACJ57173.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260408460|gb|EEX01767.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|323519901|gb|ADX94282.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332727884|gb|EGJ59286.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734002|gb|EGJ65144.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332738527|gb|EGJ69399.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 410

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 238 KSLGNYIGVF---DAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E A  A  +A             P ++IS+ E    + + T++
Sbjct: 295 EVKRILALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ +++ +    +K       G   +  GKK      
Sbjct: 355 RVAGLNPNAAAAKDAVARGAVKVDWNVV-DASFSVKE-----NGTFIIQSGKKAIARVT 407


>gi|332527115|ref|ZP_08403194.1| tyrosyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332111545|gb|EGJ11527.1| tyrosyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 396

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 98/423 (23%), Positives = 165/423 (39%), Gaps = 36/423 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQ 56
           M A +      +S RG    +     L  L         +   +G D TA  +H GH   
Sbjct: 1   MEAMR------ISRRGCDELLPEADWLKKLARAEATGTPLRIKLGLDPTAPDIHIGHTVV 54

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +  
Sbjct: 55  LNKMRQLQDLGHTVIFLIGDFTSMIGDPSGRNSTRPPLTREQIEANAQTYYKQASLVLDP 114

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   +  N  W         + ++ + ++V RM+  +  + R +    +S  EF Y
Sbjct: 115 A----RTEIRYNSEW-SDALGARGMIQLAARYTVARMMERDDFKKRFESNTPISVHEFLY 169

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT 235
            ++Q YD V L       L++GG+DQ  N++ G  L           LT PLL       
Sbjct: 170 PLMQGYDSVALK----SDLELGGTDQKFNLLVGRALQAEYGQEPQCILTMPLLEGLDGVE 225

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KM K+    + + +   + +       +I D  +  +   L+     EI  + +      
Sbjct: 226 KMSKSKGNYVGITEPANAMFA---KILSISDELMWRWYTLLSFRSEDEIAALKREVEGGR 282

Query: 296 N--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           N  +AK ++A EITT  H    AE A           +    +P  S+S       +G+ 
Sbjct: 283 NPKDAKVMLAKEITTRFHSAAAAEAAHEDFQRRAAGGVP-DEIPECSLS----GAPLGIA 337

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+ +AG   ST+EA R ++         +  +  +        + G   +  GK+    
Sbjct: 338 ALLKQAGLVPSTSEAMRMVEQ------GGVRVDGGVVSDKALKLAAGTYVVQVGKRKFAR 391

Query: 414 CHL 416
             L
Sbjct: 392 VTL 394


>gi|169632044|ref|YP_001705780.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169794220|ref|YP_001712013.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169147147|emb|CAM85006.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169150836|emb|CAO99439.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii]
 gi|193075934|gb|ABO10511.2| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 404

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 1   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 61  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP--- 117

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 118 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 176 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 232 KSLGNYIGVF---DAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQ 288

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E A  A  +A             P ++IS+ E    + + T++
Sbjct: 289 EVKRILALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATIL 348

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ +++ +    +K       G   +  GKK      
Sbjct: 349 RVAGLNPNAAAAKDAVARGAVKVDWNVV-DASFSVKE-----NGTFIIQSGKKAIARVT 401


>gi|255029464|ref|ZP_05301415.1| tyrosyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 285

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 124/282 (43%), Positives = 166/282 (58%), Gaps = 5/282 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID 
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDE 280


>gi|108762063|ref|YP_631185.1| tyrosyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465943|gb|ABF91128.1| tyrosyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 420

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 90/421 (21%), Positives = 168/421 (39%), Gaps = 36/421 (8%)

Query: 13  SERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             RG +           L     +   +    G+D +   LH GH   L  +   Q+ GH
Sbjct: 18  VTRGTVDLHVPEDLKKKLQYSYDTGKPLVIKAGFDPSRPDLHLGHSLLLTRMRRFQEFGH 77

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + L+G  T +IGDP+ R+ +R  +   E++ N E  K      +     ++   +  N
Sbjct: 78  TVVFLIGDFTGLIGDPTGRNATRPALTRDEVKANAETYKKQVFKVLD----ESKTQVRFN 133

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +WL S+   + +  + S +SV RML  +  + R + E S+S  EF Y +LQ YD V L 
Sbjct: 134 SSWLDSLGT-EGMIRLASRYSVQRMLERDDFKKRFRGEVSISIHEFLYPLLQGYDSVVLK 192

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT---------KMGK 239
                 +++G +DQ  N++ G  L +         +T P+L   +           KM K
Sbjct: 193 ----ADVELGATDQLFNLLVGRQLMKEEGMAPQVIMTGPILEGLNAKAVDGKIVGDKMSK 248

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   + +++   +    +    +I D  +  + + L+    +E+  M            
Sbjct: 249 SLDNYVGIDEPADT---IFGKLMSITDDLMWRYYELLSAKTRAELAEMRAQVESGALHPK 305

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTL 355
             K   A E+T    G E  +KAA    + F      +  +P + +S     + + +  L
Sbjct: 306 AVKVGFAQEMTARFQGEEAGKKAAEDFEKRFAKKELSTDELPLVEVSLGGAEK-LPVTKL 364

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + ++    S  EAR+ +    +++N   + + K ++        G   +  GK       
Sbjct: 365 LPESKLVASATEARKLMAQGGVRVNGEKVQDVKAELGA------GEYTVQVGKLKAARVK 418

Query: 416 L 416
           L
Sbjct: 419 L 419


>gi|154174441|ref|YP_001407884.1| tyrosyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112803440|gb|EAU00784.1| tyrosyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 401

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 98/425 (23%), Positives = 170/425 (40%), Gaps = 36/425 (8%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQL 57
             D + I+ E  RG + ++ +   +  L               G+D TA  LH GH   L
Sbjct: 1   MVDLMQIMQEVKRG-VAEMIDEDRIFNLIKNFYEKGENFYVKAGFDPTAPDLHLGHTVVL 59

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
             +  LQK G     L+G  T  IGDPS +  +R+ +  Q + +N +  +      +   
Sbjct: 60  GKMALLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKQTVLKNAKTYEEQVFKILDPA 119

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  ++ N TW   +    ++  + S F V RML  +    R+K    +S  EF Y 
Sbjct: 120 ----KTKIMFNSTWSNELGAAGMIE-LASTFPVARMLERDDFEKRIKAGTPISISEFLYP 174

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGT 235
           ++Q YD V +     C ++MGG+DQ  N++ G  L        +   +T PLL       
Sbjct: 175 LMQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRIYNVGKEQAVITMPLLEGLDGVN 230

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQG 292
           KM K+L   I +     +P   +    +I D  +  +   L+     EI           
Sbjct: 231 KMSKSLGNYIGVT---DAPNEMFAKTLSISDELMWRWYDLLSEKSTGEIAALRASVDAGK 287

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
               +AK+ +A EIT   HG   A+ A+         +     + T  +S         +
Sbjct: 288 YHPKKAKEDLAYEITARYHGEAAAKAASEEFNSVHVQNQIPSDLETFEMSS-----PAWI 342

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +       + ++ARR + +NA+ ++   I++E+L++       +G   L  GKK   
Sbjct: 343 VEALTHCKLCPTNSQARRDIAANAVSVDQKKINDEQLKL------DSGIYVLQVGKKKFA 396

Query: 413 ICHLC 417
              + 
Sbjct: 397 RLKVV 401


>gi|322506181|gb|ADX01635.1| Tyrosyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
          Length = 410

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 172/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 238 KSLGNYIGVF---DAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E A  A  +A             P ++IS+ E    + + T++
Sbjct: 295 EVKRILALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ +++ +    +K           +  GKK      
Sbjct: 355 RVAGLNPNAAAAKDAVARGAVKVDWNVV-DASFSVKE-----NRTFIIQSGKKAIARVT 407


>gi|32491087|ref|NP_871341.1| hypothetical protein WGLp338 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166294|dbj|BAC24484.1| tyrS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 496

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 133/423 (31%), Positives = 221/423 (52%), Gaps = 11/423 (2%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
               D +  L  R  I ++++   +  +  +  +  Y G+D TA SLH GHL  L+ L  
Sbjct: 69  NIMKDLIQELKNRKLISKLTDEINIKKILKEKKINLYCGFDPTADSLHIGHLIPLLFLKR 128

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
               GH PI ++GG T+++GD + +     + + + ++   + I+    + IKY     +
Sbjct: 129 FSNFGHIPIIVIGGATALLGDFNIKKNKSFLEKYKNVKNWSKTIENQILNIIKYENNNCN 188

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++LNN  W+  +K I+ LR+IG F S+N++L  E V+ +LK  Q +SF+EF+Y +LQ Y
Sbjct: 189 LIILNNYLWIKELKIINFLRDIGRFISINKILRKEIVKKKLKENQHISFMEFSYSLLQGY 248

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-- 240
           D+  L  NYD  +Q+GGSDQW NII GIDL  ++   K++ +T+PLLT ++G+K+GK+  
Sbjct: 249 DYYFLNLNYDVYIQIGGSDQWSNIISGIDLVNKINKKKVYGITTPLLTRSNGSKLGKSDD 308

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINE 297
               IWL+K+ TS Y F+Q+W N  D  +  + K  T + MSEI+++      +     +
Sbjct: 309 KEKVIWLDKKKTSVYEFYQFWLNTPDEKIFRYLKLFTFISMSEINKLKCKFFNKEINPFQ 368

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMG 351
           A+KI+A EIT +VHG  +   A  A    F   I    +          I          
Sbjct: 369 AQKILADEITKIVHGISQLRLAQKATNFLFYKKISELSIEDFYLLSTSGIKIYYPKSNEN 428

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  ++V +  + S N A+  + S++I+INN    +     K +D        +  GKK+ 
Sbjct: 429 IKDILVNSKLSKSKNNAKSVILSSSIRINNKKQKSIDFMFKKEDKLFNLFTLIKKGKKDF 488

Query: 412 IIC 414
            + 
Sbjct: 489 CLL 491


>gi|108885117|ref|NP_073125.2| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|97537329|sp|P47693|SYY_MYCGE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84626163|gb|AAC72475.2| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079005|gb|ABY79623.1| tyrosyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 396

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 142/412 (34%), Positives = 227/412 (55%), Gaps = 20/412 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ L  L ER    Q +   ELD    +     Y+G+D TA+SLH G+   + +   L
Sbjct: 1   MLNNILQFLKERELYSQANFETELDNHLKEKKNNFYVGFDPTANSLHIGNYVLIHIAKLL 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +  GH P  ++G  T++IGDP+ R E R+++  +EI +N + IK     F+       D 
Sbjct: 61  KDMGHTPHIVLGSATALIGDPTGRIELRKILEEKEIVKNTKTIKKQIKQFL------GDV 114

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++  N+ WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQAYD
Sbjct: 115 IIHENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSARW--EKGLTLMELNYMILQAYD 172

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L KN++  LQ+GGSDQW NI+ G +L +R     +F LT+ LL  A+G KMGKT SG
Sbjct: 173 FYYLHKNHNVTLQIGGSDQWANILAGANLIKRKNNASVFGLTANLLVKANGEKMGKTSSG 232

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL++  TS ++F+QYW N+DD  +      LT L    ID +  L+G +I + K+++A
Sbjct: 233 ALWLDENKTSVFDFYQYWINLDDQSLKKTFLMLTMLDKKVIDELCNLKGPKIKQTKQMLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             IT ++HG ++A++A   +   F             +    V     L+  +V+  F  
Sbjct: 293 FLITELIHGTKKAKEAQQRSELIFSN--------QPDLDIKLVKTSTNLIDYLVETKFIK 344

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S +EARR +    + INN  + +    I+ ++        +  GKK+ +   
Sbjct: 345 SKSEARRLISQKGLTINNKHVLDLNQIIEWKEELQ----IIRKGKKSFLTIK 392


>gi|299768264|ref|YP_003730290.1| tyrosyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698352|gb|ADI88917.1| tyrosyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 410

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 174/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  + +      N  
Sbjct: 238 KSLGNYIGVF---DTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLEEIAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E A  A  +A          +  P ++IS+ E    + + T++
Sbjct: 295 EVKRILALELVERFHDAEAAANAHKSAGNLITEGEVPEDTPEVTISRGEFGGEIFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ + + +    +K       G   +  GKK      
Sbjct: 355 RVAGLNPNAAAAKDAVARGAVKVDWNAV-DAGFSVKE-----NGTFIIQSGKKAIARVT 407


>gi|296211473|ref|XP_002752425.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 477

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 136/431 (31%), Positives = 202/431 (46%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG        R    EL  L ++G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPERGTKIELPELFNRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-------GIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  +  + +Q N   ++                G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALEKESVQANARALRLELEALAANHQQLFSDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RPWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQMRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID +  L     E 
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMHLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATA----------AMECFDMSIHSQHMPTISISKDE 345
              +K +A E+T +VHGRE  + A             A+E        +       S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEDMSDQELKELFKEAPFSELV 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N +   I  Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|262281575|ref|ZP_06059354.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257034|gb|EEY75773.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 410

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 26/419 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 238 KSLGNYIGVF---DTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKTLLDEIAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E A  A  +A          +  P ++IS+ E    + + T++
Sbjct: 295 EVKRILALELVERFHDAEAAANAHKSAGNLITEGEVPEDTPEMTISRGEFGGEIFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             AG   +   A+  +   A+K++ + + +    +K       G   +  GKK      
Sbjct: 355 RLAGLNPNAAAAKDAVARGAVKVDWNAV-DASFSVKE-----NGTFIIQSGKKAIARVT 407


>gi|325123508|gb|ADY83031.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 410

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 173/418 (41%), Gaps = 26/418 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 7   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 67  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP--- 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 124 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLV 181

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 182 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMS 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 238 KSLGNYIGVF---DTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQ 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E A  A  +A          +  P ++IS  E    + + T++
Sbjct: 295 EVKRILALELVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISLGEFGGEIFIATIL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             AG   +   A+  +   A+K++ + + +    +K       G+  +  GKK     
Sbjct: 355 RVAGLNPNAAAAKDAVARGAVKVDWNAV-DASFSVKE-----NGSFIIQSGKKAIARV 406


>gi|58259980|ref|XP_567400.1| tyrosine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116152|ref|XP_773247.1| hypothetical protein CNBJ0260 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255869|gb|EAL18600.1| hypothetical protein CNBJ0260 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229450|gb|AAW45883.1| tyrosine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 478

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 145/455 (31%), Positives = 224/455 (49%), Gaps = 46/455 (10%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K+  L  L ERGF+  I++  +L    +    T Y G D +ASSLH G+L  L+ L   Q
Sbjct: 26  KATVLQELDERGFVAAITS-DKLKQHVAS-PTTIYSGVDPSASSLHVGNLIPLLGLLHFQ 83

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH+ I L+GG T  IGDPS R   R+ +   E++ NI  I      F   G       
Sbjct: 84  ARGHQSICLIGGATGSIGDPSGRSTERKSLTPSELRLNIAGITSQVHRFFIRGQEYLSKR 143

Query: 119 ----------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
                     G     ++NN  W+  +  +D LR  G    V+ MLS +SV++RL  +  
Sbjct: 144 GMDLTAMSKDGGRGVKVMNNYDWMRDVSLLDFLRTTGKMARVSTMLSRDSVKNRLSSDSG 203

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER------------- 215
           +S+ EF Y +LQAYDF  L   + C +Q+GGSDQWGNI+ GIDL  R             
Sbjct: 204 ISYTEFTYQLLQAYDFSHLHSEHGCNIQLGGSDQWGNIVAGIDLIRRGKIAEREEKGEQV 263

Query: 216 -LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
             +   ++ LT PLLTT++G K GK+   A+WL+++ TS   F+Q++    D DV  + K
Sbjct: 264 KEEEEDVYGLTIPLLTTSTGEKFGKSAGNAVWLDEKRTSAAEFYQFFLRTTDEDVEKYLK 323

Query: 275 RLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             T LP+S+I  + +           +K++A E+T +VHG     +A TAA   +  S  
Sbjct: 324 LFTFLPLSQIQDVMQAHQISKTERLPQKLLAAEVTELVHGPAALTRALTAAQVLYSTSTS 383

Query: 333 SQHMPTI-----------SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           S     +            + K+ ++  MG+  + V  G   S  E +R ++S A+++N+
Sbjct: 384 SLTAEKVLDAFRGDKRFHRVKKENLAE-MGVGKMAVTYGLCGSVGETQRLVQSFALQVND 442

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             IS+ + +I ++D        +  G K  II ++
Sbjct: 443 RKISDHREKIAVEDLVDGHIAIVRAGNKRQIILYV 477


>gi|139438885|ref|ZP_01772345.1| Hypothetical protein COLAER_01349 [Collinsella aerofaciens ATCC
           25986]
 gi|133775596|gb|EBA39416.1| Hypothetical protein COLAER_01349 [Collinsella aerofaciens ATCC
           25986]
          Length = 403

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 95/402 (23%), Positives = 168/402 (41%), Gaps = 21/402 (5%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            QI    +L     +G  +   +G D T+  LH GH   L  +   Q  GH    ++G G
Sbjct: 16  AQIVPEADLRKKLEKGEPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGNG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T++IGDPS ++ +R  +  ++I+ N E         +          +++N  W+ S+  
Sbjct: 76  TALIGDPSGKNSTRPQLSQEQIEANAETYVSQAMKILDP----EKTTIVHNGDWILSMDL 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
              L ++ S F+V R+L  +    R + +  ++  EF Y ++QA+D V++       ++M
Sbjct: 132 -AGLLQVCSKFTVARILERDDFTKRYQSQTPIALHEFLYPVMQAFDSVQIK----ADVEM 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E++      ALT PLL  T    KM K+    I L     +P +
Sbjct: 187 GGTDQLFNLLAGRELMEKMGMEPQIALTMPLLEGTDGVRKMSKSYGNYIGLT---DAPKD 243

Query: 257 FWQYWRNIDDADVVSFAK---RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
            +    +I D  +  + +    LT   + +ID        +  E K+ +  ++    HG 
Sbjct: 244 MFGKTMSIPDEMIGKYYRLASSLTPAEVDKIDAALADGSADPYELKRALGRDLCDTYHGA 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHL 372
              ++A       F         P   +       G + L  L+   G + S  +ARR +
Sbjct: 304 GAGDEAQAEFDRVFKEG-QLADFPEKHVELTVNDEGQIYLAGLLKDLGLSASAGQARRDI 362

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +KIN   ++ +   I            LS GK+     
Sbjct: 363 DGGGVKINGKAVAPKSYNIDPSALKLGDT--LSVGKRKGFKL 402


>gi|309807304|ref|ZP_07701273.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166286|gb|EFO68496.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 364

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 134/368 (36%), Positives = 186/368 (50%), Gaps = 17/368 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRRNEKSLTAQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRL--ATGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+   
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGV 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV-SRGMGLLTL 355
           +A E+T  VHG      A       F+ +I    +  I          E+      L+ L
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKDLSVKQIEQGFKNAPYVEISKESKNLVDL 355

Query: 356 IVKAGFAT 363
           +V+ G   
Sbjct: 356 LVETGIEK 363


>gi|293611371|ref|ZP_06693667.1| tyrosyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292826243|gb|EFF84612.1| tyrosyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 404

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 173/418 (41%), Gaps = 26/418 (6%)

Query: 5   KSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  
Sbjct: 1   MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     
Sbjct: 61  LKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP--- 117

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++
Sbjct: 118 -NKTKVRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L       KM 
Sbjct: 176 QGYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L   I +     +P   +Q   ++ D+ +  +   L+   + EI  +        N  
Sbjct: 232 KSLGNYIGVF---DTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQ 288

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E K+I+A E+    H  E A  A  +A          +  P ++IS  E    + + T++
Sbjct: 289 EVKRILALELVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISLGEFGGEIFIATIL 348

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             AG   +   A+  +   A+K++ + + +    +K       G+  +  GKK     
Sbjct: 349 RVAGLNPNAAAAKDAVARGAVKVDWNAV-DASFSVKE-----NGSFIIQSGKKAIARV 400


>gi|302873370|ref|YP_003842003.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688462|ref|ZP_07630908.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576227|gb|ADL50239.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 401

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 171/409 (41%), Gaps = 31/409 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I     L     +       +   +G D +A  +H GH   L  +  LQ  GHK I 
Sbjct: 15  VDEIIGLDSLKEKIEKANENGKPLIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHKVIV 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + + R+ + ++++ EN    +      +          +  N  WL
Sbjct: 75  IIGDFTGKIGDPTGKTKGRKALTTEQVLENARTYETQIFKVLDKD----KTEVRFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + ++   +  +V RML  E  + R + +  +S  EF Y ++Q YD V +     
Sbjct: 131 SQLSFEETIKLAATM-TVARMLEREEFKKRYENQVPISVHEFFYPLMQGYDSVAIH---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L +         +  PLL       KM K+L   I ++++ 
Sbjct: 186 ADIELGGTDQRFNVLMGRMLQKEYGQEPQTTIFMPLLEGLDGKEKMSKSLGNYIGIDEKA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKKIIATEITT 308
              Y        + D  ++ +   +T +      E++   + +     + K  +A EI  
Sbjct: 246 EVMYE---KAMTVPDNLIIKYFNLVTDMHPDKVKELESTLRDEKVNPRDIKMRLAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG +EAEKA    M  F        + T+++S         +  ++V   F  S ++ 
Sbjct: 303 LYHGEKEAEKAEERFMLIFQKGKIPTDIETVNVS----ENNFDIGEILVSEKFVASKSDL 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR +    +KINN+I+ +      L +      + +  GKK  I   + 
Sbjct: 359 RRLIDQGGVKINNNILKD------LAEIKIEKEMIVQVGKKKFIHISIA 401


>gi|118474811|ref|YP_892369.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414037|gb|ABK82457.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 402

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 178/426 (41%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  +  + + G + +I +   +  L      +        G+D TA  LH GH  
Sbjct: 1   MNNIDS-IMQEIKK-G-VAEIIDFSRIKSLIKNYYENGKNFYIKAGFDPTAPDLHLGHTV 57

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +  LQK G     L+G  T+ IGDPS +  +R+++    I +N +  K      + 
Sbjct: 58  VLNKMRLLQKHGGIVQFLIGDFTAKIGDPSGKSATRKVLDDDTIAKNAKTYKEQVFKILD 117

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               ++   ++ N  WL  +   D L  + S F+V RML  +    R K E  ++  EF 
Sbjct: 118 ----ESKTEVMFNSAWLSKLGA-DGLIALASTFNVARMLERDDFTKRYKNETPIAISEFL 172

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-AS 233
           Y +LQ YD V +     C ++MGG+DQ  N++ G  LG       +   +  PLL     
Sbjct: 173 YPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLGRTYGIGKEQAIIMMPLLVGLDG 228

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKL 290
             KM K+L   I + +   S  + +    +I D  +  + + L+     +I         
Sbjct: 229 VNKMSKSLGNYIGVTE---SANDIFAKTLSISDDLMWVWYELLSDKSSDDILNLKADVSS 285

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                 + K+ +A EIT+  HG  EA  A                MP   I KDE    +
Sbjct: 286 AKLHPKKVKENLALEITSRFHGISEAGAAKDEFDRVHSKKELPSDMPEFEIVKDE----I 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  +      +S  EARRH+K+NA+ +N   + +E+L++        G   L  GKK 
Sbjct: 342 WIVEALSNCALCSSNAEARRHIKANAVSVNQQKVIDEQLKLAK------GEYILQVGKKT 395

Query: 411 HIICHL 416
           +    +
Sbjct: 396 YAKLKV 401


>gi|89899538|ref|YP_522009.1| tyrosyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344275|gb|ABD68478.1| tyrosyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 414

 Score =  272 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 98/409 (23%), Positives = 168/409 (41%), Gaps = 26/409 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I     +  L         +   +G D TA  +H GH   L  L  LQ  GH  
Sbjct: 24  RGCEELIPQDDWIKKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHTV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  +  ++I+ N +      S  +      +   +  N  
Sbjct: 84  IFLIGDFTTLIGDPSGRNTTRPPLTREQIEVNAQTYYRQASMVLDP----SKTEIRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W         + E+ + ++V RM+       R K    +S  EF Y ++Q YD V L   
Sbjct: 140 W-GDTLGSRGMIELAAKYTVARMMERNDFHDRFKSGTPISVHEFLYPLMQGYDSVALR-- 196

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL    G  KM K+    I +++
Sbjct: 197 --SDLELGGTDQKFNLLMGRHLQAEYGQEPQCILTMPLLEGLDGIEKMSKSKGNYIAISE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEIT 307
           +  + +       +I D  +  +   L+    ++I +       G+   +AK  +A EIT
Sbjct: 255 DANTMFAKC---LSISDVLMWRWYTLLSFRSEADIAKLQAEVTAGRNPKDAKVALAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    AE A    +           +  +++S  +    +G+  L+  AG A S+ E
Sbjct: 312 ARFHSAAAAEAAEQDFVN-RSRGGVPDEIAEVALSLGDGGAPLGIGALLKLAGLAASSGE 370

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             R +    ++I+ S++S++ L++        G   +  GK+      L
Sbjct: 371 GNRLIDGGGVRIDASVVSDKGLKLGA------GTYVVQVGKRKFARVTL 413


>gi|194246515|ref|YP_002004154.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254783623|sp|B3R0D7|SYY_PHYMT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|193806872|emb|CAP18301.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 417

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 134/420 (31%), Positives = 221/420 (52%), Gaps = 19/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
                L  R  I + S+ +   +L      +  Y G+D TA SL  GHL Q++    +QK
Sbjct: 2   SLFEELKWRNLITECSDEKRAKLLLDGNKKIKFYCGFDATAGSLTVGHLVQIITFLLIQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L+GG TS IGDP  + E R+++   +I +N  KI   F   + +        +
Sbjct: 62  KGHFPIVLLGGATSFIGDPK-KIEERKLLDPSQILDNFNKISLQFKKILSFI----SFEI 116

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+  I  I+ LR+ G  F++N MLS E + +RL  ++ LS+ EF+YM+LQ+ DF 
Sbjct: 117 VNNYDWISKIDVINFLRKYGKLFNINYMLSKEVIANRL--KKGLSYAEFSYMVLQSLDFQ 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----TPKLFALTSPLLTTASGTKMGKTL 241
            L ++ +  +Q GGSDQWGNI  G++L  ++       K   +T+ LL  + GTK GK+ 
Sbjct: 175 YLFEHKNVIMQFGGSDQWGNITSGLELIRKINKIKDNDKPVGMTNALLLKSDGTKFGKSE 234

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAK 299
            G +WL++++TSPY  +QY+ N +D +VV++ K LT L   EI   +   +   +   A+
Sbjct: 235 DGVLWLDQKLTSPYKIYQYFLNTEDKEVVNYLKSLTLLSKKEIINLKEENIVNPQKRLAQ 294

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLT 354
           KI+A EI T++HG++  E         F          +      +++  EV+  + LL 
Sbjct: 295 KILAKEIITLIHGKKIFENCFNTNQALFVGKKDQLSEQSFYFLKYTLNYIEVNDKISLLE 354

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V      S N+A+  + ++AIKI + I+ + +L + ++       I L  GK+ + + 
Sbjct: 355 ALVFTKLTNSKNKAKELISNHAIKIFDQIVDDTELILNIKHSLFNKYILLKKGKRFNALI 414


>gi|328872662|gb|EGG21029.1| tyrosine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 487

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 125/444 (28%), Positives = 210/444 (47%), Gaps = 52/444 (11%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RGFI+Q++   E     +   V+ Y G+D TA+SLH G+L QLM+L   ++ 
Sbjct: 41  NVIDTLKSRGFIYQMTANDEEMKKLTSKPVSLYAGFDPTANSLHIGNLIQLMVLLQFKRH 100

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T++IGDPS +   R  +    I +N + I+    + +       D L++
Sbjct: 101 GHNPIALLGGATALIGDPSGKSTDRPQLDQTFITDNSKIIRENIETIL-----GKDNLIV 155

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-----------------------L 163
           +N  W   I  I   R+IG +F +  ML  + +++R                        
Sbjct: 156 DNYDWNKDISIISFFRDIGKYFRIGSMLRKDFIQNRIGQVMEIPKGNGETTEKCVVLNNT 215

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
                +S  EF Y + Q+ D+V L   ++C +Q+GGSDQWGNI  G DL ++        
Sbjct: 216 SDSTGISLPEFCYSLFQSNDYVHLHSTHNCVIQIGGSDQWGNITDGCDLIKKKLNKTAHG 275

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           +T PLLT + G K+GK+   +IWL+   TSP+NF+QYW  I D DV       T +P+ E
Sbjct: 276 ITIPLLTNSQGKKLGKSEGNSIWLSASRTSPFNFFQYWIQIADDDVEKLLNLFTFIPLQE 335

Query: 284 IDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----------- 330
           I  + +       +  A++++A  +T +VHG +  E+A       F              
Sbjct: 336 IKEVMEKHRAEPHLRHAQRVLAEHVTRIVHGDQGVEEAINTTKLLFSEDSLSILDSYRND 395

Query: 331 -------IHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                      +   I IS+  +   +   + ++   A  + S N+ ++ ++S +I+IN 
Sbjct: 396 PVRADSLFSKLNFKEIEISQYPIQGEKSATVASIFQSAS-SASRNQVKQLIESKSIQING 454

Query: 382 SIISNEKLQIKLQDFDSTGNIKLS 405
           + ++    +I+  D      I L 
Sbjct: 455 TTVT-PGQKIQQSDLIGNHYIILR 477


>gi|187251251|ref|YP_001875733.1| tyrosyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971411|gb|ACC98396.1| Tyrosyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 387

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/402 (26%), Positives = 172/402 (42%), Gaps = 29/402 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +  +S     + L S   +   +G D T+S LH GH   L  L   Q  GH  +
Sbjct: 10  LLTRGCVDVVSKEELENKLKSGRTLKVKLGCDPTSSDLHLGHSVVLSKLRQFQDLGHTAV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T+ IGDPS R+ +R  +  ++I +N +         +     K    ++ N TW
Sbjct: 70  LVIGDFTAGIGDPSGRNSTRPQLDREQILQNAKTYTEQVFKVLD----KEKTEVVFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L        L    S  +V + L  E  + R+     +S LE  Y + Q  D V L    
Sbjct: 126 LDPFVKTKELLLTLSKITVRQGLEREDFKKRMAAGDPVSILEILYSVFQGQDSVALK--- 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L +         LT+PLL  T    KM K+ +  I LN  
Sbjct: 183 -ADVELGGTDQIFNLLVGRQLQKNAGQEAQVVLTTPLLVGTDGVKKMSKSYNNYIGLN-- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                  +    +I D  +  + + LT+  M ++            EAKK +A  + T  
Sbjct: 240 -DPAEEMFGKAMSISDEMMYMYYELLTSEDMDKVKA------MHPMEAKKSLAKILVTRF 292

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  E AE A     + F        M  I+++      G  + ++I+KAG A S NEARR
Sbjct: 293 HNAEAAEAALNNFEKVFSKKEKPADMSKITVA-----EGESVSSVIIKAGAAKSKNEARR 347

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            +   A+KIN+  + ++ +      F++     L  G+++  
Sbjct: 348 LIDGGAVKINDVKVESDGVC----QFETGN--ILQVGRRHFF 383


>gi|254423652|ref|ZP_05037370.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196191141|gb|EDX86105.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 408

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/397 (25%), Positives = 174/397 (43%), Gaps = 23/397 (5%)

Query: 21  ISNPRELDIL-CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
             +   ++ L  S   +   +G D T S +H GH T +  L   Q  GH  I L+G  T+
Sbjct: 30  SVDENFIERLTKSDRPLRVKLGIDPTGSEIHLGHSTLVRKLRAFQDAGHTAILLIGDFTA 89

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ R E R+ +   +++ N E         + + T      +  N  WL  I    
Sbjct: 90  RIGDPTDRAEVRKQLSEADVKANAETYIDQIKPILDFETP-GRLEIRYNSEWLSDIDLGK 148

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  + +  ++ +ML+ E   +R ++   +   EF Y +LQ YD V L       +++GG
Sbjct: 149 MLELLSTM-TLGQMLAKEGFANRYEKGTPVYLHEFLYPLLQGYDSVALQ----SDIELGG 203

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  N+  G DL         F +  PLL  T    KM K+L   + L ++  + Y+  
Sbjct: 204 TDQKFNVTVGRDLQRHFGLQPQFGMLLPLLMGTDGSQKMSKSLGNYVGLQEDPLTMYS-- 261

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                + DA +  +   LT LP+ ++            + +K++A  +T + HG+  A +
Sbjct: 262 -KLEKVPDALIDDYFTYLTDLPLDQLPE-------NPRDQQKLLAKTVTGIFHGKAAAAQ 313

Query: 319 AATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
           A   A+      +  +  +P  S+SK  V     L  L+       S++EARRH+K  A+
Sbjct: 314 AQQDALTLMAGQTSAAASVPEFSLSK--VGFPAKLFYLLGATPLCESSSEARRHIKGGAV 371

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           K++   +S+  L  +  +        L  GKK  +  
Sbjct: 372 KMDGEKMSDPNLTFEQAEDLEGK--VLQIGKKKFVRL 406


>gi|15894067|ref|NP_347416.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81530926|sp|Q97KY6|SYY2_CLOAB RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|15023666|gb|AAK78756.1|AE007593_4 Tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508194|gb|ADZ19830.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 400

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 176/423 (41%), Gaps = 37/423 (8%)

Query: 5   KSDFLSILS--ERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQL 57
             +    +   ++G   +I + +EL             +   +G D +A  +H GH   L
Sbjct: 1   MKNIDEQIKIIKKGA-EEIIDAKELKEKLIKAEKENTQLVVKLGLDPSAPDIHLGHAVVL 59

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
             L  LQ  GHK + ++G  T +IGDP+ + ++R+ + SQ++ +N E  +      +   
Sbjct: 60  RKLKQLQDLGHKIVIIIGDFTGMIGDPTGKSKTRKQLSSQQVMKNAETYEKQIFKILD-- 117

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
             +    +  N  WL  + + +++  + S ++V RML  E  + R K +QS+   EF Y 
Sbjct: 118 --RNKTDLRFNSQWLEKLNFKEVIE-LASKYTVARMLEREDFKKRFKNQQSIGIHEFFYP 174

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTK 236
           ++QAYD + +       ++ GG+DQ  N++ G  L       K  A+  PLL       K
Sbjct: 175 LMQAYDSMAIK----ADIEFGGTDQRFNLLMGRTLQAEYGEEKQIAIFMPLLEGIDGKEK 230

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGK 293
           M K+L   I + +   S  + +     I D+ ++ + +  T +    ID   +       
Sbjct: 231 MSKSLGNYIGIEE---SAKDMYVKVMQIPDSLIIKYFELCTDMHPDAIDIIRKQLNEDKV 287

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              + K  +A EI  + H   EA  A       F      + +P   +  +       L+
Sbjct: 288 NPRDIKMKLAKEIVCLYHNEAEALNAEIYFKNLFQDKEIPEDIPIFKVRSEN-----NLI 342

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             IVK    TS +EARR +    +K+N   + +        D     N  +  GKK   I
Sbjct: 343 EAIVKINSNTSKSEARRLIAQGGVKLNGRKVIDFN------DIILKSNDVIQIGKKK--I 394

Query: 414 CHL 416
             L
Sbjct: 395 VKL 397


>gi|269123481|ref|YP_003306058.1| tyrosyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314807|gb|ACZ01181.1| tyrosyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 402

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 28/402 (6%)

Query: 11  ILSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG    IS       L +       +   +G D T S LH GH   +  L   Q  
Sbjct: 15  EILKRGCDEIISEEEFKKKLENSIRNNKPLKVKLGIDPTGSELHIGHAVPIRKLKQFQDL 74

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   L+G  T+ IGDP+ + E+R+M+  + IQENI+         +          ++
Sbjct: 75  GHEVNFLIGTFTARIGDPTGKSETRKMLSFETIQENIKTYLEQVKIILDL----NKIKVV 130

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +K  ++L+ +   F+V++M+  E    RL   Q +S +EF Y ILQ YD V 
Sbjct: 131 YNHEWLEKLKLEEVLKLLS-MFTVSQMIQREDFSKRLSNNQPVSLIEFTYPILQGYDSVA 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L    +  +++G ++Q  N++ G DL +     +   +  P+L       KM K+L   I
Sbjct: 190 L----EADVELGATEQKFNLLRGRDLQKNFNQEQQICMIMPILVGLDGVEKMSKSLGNYI 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            +     SP + +    +I D  ++++ + +T LP+ E+     L+ +   + KK +  E
Sbjct: 246 SIQ---DSPNDMFGKIMSISDELMLNYYEMITDLPLDEVKE--MLKTQHPMDCKKKLGYE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    +G + A ++       F     +  +P I I ++E++     L L+ K  F +S 
Sbjct: 301 LVKEYYGEQVAIESKAWFENVFSNRNLNVELPEIKIVENELAA----LELLSKLNFISSN 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +E RR +   A+K+N+ II +    I L +      + +  G
Sbjct: 357 SEGRRLIDQGAMKVNDVIIKDINEIINLTE-----EVIVRCG 393


>gi|156060931|ref|XP_001596388.1| hypothetical protein SS1G_02608 [Sclerotinia sclerotiorum 1980]
 gi|154700012|gb|EDN99750.1| hypothetical protein SS1G_02608 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 698

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 127/482 (26%), Positives = 222/482 (46%), Gaps = 70/482 (14%)

Query: 6   SDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
              LSIL ERG++HQI+ +  E+D + ++  + AY+G D TA SLH GHL  LM LFW+ 
Sbjct: 65  KSMLSILEERGYVHQITGSRDEVDRMMTEKRLGAYVGVDPTAPSLHIGHLLPLMSLFWMY 124

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KY 116
             G+  +SL+GG T+ IGDP+ R  +R  M+S    ENI K+                K+
Sbjct: 125 VHGYHTVSLVGGATAKIGDPTDRLTTREKMKSTTRNENILKMHYQMKGIWLNVEAYGRKH 184

Query: 117 GTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
           G     A    ++NN  W+  +  ++LL+ +G    +  M++ ++V++++ +   +S+ E
Sbjct: 185 GYKWEWAWKRGLVNNNAWMNGLTVMELLQVLGPGMRMGAMIAKDTVKNKMNKGDGMSYAE 244

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE--------------RLKTP 219
           F Y +LQ++D+  +       +Q+GGSDQ+GNI  G+D  +                K  
Sbjct: 245 FTYPLLQSWDWWHMYNTKGITMQIGGSDQYGNITAGVDAVKYILANHPDPTIKEQHEKAT 304

Query: 220 KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
             F  T PLLTT+SG K GK+   A+WL+K+M S ++ + ++    D DV  + K  T +
Sbjct: 305 PPFGFTVPLLTTSSGAKFGKSAGNALWLDKDMMSSFDLYGHFLRTSDQDVEKYLKLFTFM 364

Query: 280 PMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           P+ EI ++ +         +A+  +A +   +VHG  EA+ A       F  S +++++ 
Sbjct: 365 PVEEITKLMEEHMKAPSQRQAQHKLARDFLELVHGEPEAKAAELQHRLLFSKSNNAENLE 424

Query: 338 ----TISISKDEVSR-----------------------GMGLLTLIVKAGFATSTNEARR 370
                + +++ +++                           +  ++V AG   + +EA R
Sbjct: 425 KLQNDLKLAEHKLASHPQGTNASNRPSADLKLPRSFVMSRSIPRIVVAAGLCDTNSEANR 484

Query: 371 HLKSNAIKINNS-----IISNEKLQIKL----------QDFDSTGNIKLSFGKKNHIICH 415
              +  + I  S        ++ L                      + L  GK N  I  
Sbjct: 485 LCGAAGLYIGGSRPLGYKGKDDALVFTPIKRWQNEDTHHYLIDGSMLVLRRGKSNIRIIK 544

Query: 416 LC 417
           + 
Sbjct: 545 IV 546


>gi|302871481|ref|YP_003840117.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574340|gb|ADL42131.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 396

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 100/393 (25%), Positives = 181/393 (46%), Gaps = 28/393 (7%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L     +   +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + 
Sbjct: 26  KLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKS 85

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E+R+ +  +E+Q+N E  K      +          +  N  WL  + ++D++  + S +
Sbjct: 86  ETRKQLTKEEVQKNAEPFKQQVLKILDPQ----KTTIRYNSEWLEPMNFLDVI-NLASKY 140

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ 
Sbjct: 141 TVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILM 196

Query: 209 GIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           G  L +       ++  L   L+ T    KM K+L   I +N+    P   +    +I D
Sbjct: 197 GRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINEP---PNVMYGKVMSIPD 253

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAA 323
             ++S+ +  T +   EI+ + +   +      +AK  +A EI  + HG E A+KA    
Sbjct: 254 EVMISYYELTTDVEPEEIEEIRRKLEEGTLHPRDAKMRLAREIVKLYHGEEAAKKAEEEF 313

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           ++ F       ++P + +   +V     L   +V+    +ST+E  R +KS A+K+N   
Sbjct: 314 IKVFQKKDIPDNIPEVELQSSKVY----LPRFMVENKLCSSTSEGMRLIKSGAVKLNGEK 369

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           I++  ++ +  D        L  GK   +   L
Sbjct: 370 INDLDIEFQNGD-------VLQVGKLKFVKIKL 395


>gi|32266329|ref|NP_860361.1| tyrosyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81666011|sp|Q7VHY1|SYY_HELHP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|32262379|gb|AAP77427.1| tyrosyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 400

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/412 (26%), Positives = 180/412 (43%), Gaps = 28/412 (6%)

Query: 13  SERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             RG +  I     +  L               G+D TA  LH GH   L  L   Q+ G
Sbjct: 10  ISRGCVEFI-GEEYIRDLVERFYNTGERFCVKAGFDPTAPDLHLGHTVLLQKLATFQRYG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                L+G  T+ IGDPS + E+R+ + +++++ N    K      +          +  
Sbjct: 69  GDVKFLIGDFTATIGDPSGKSETRKPLSAEQVKANALTYKEQVFKVLDPQY----TQICF 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +  + L+  + S FSV RML  +    R    QS+S +EF Y +LQ YD V L
Sbjct: 125 NSKWLNELGALGLIT-LTSHFSVARMLERDDFTKRYNNNQSISIVEFIYPLLQGYDSVAL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
               +C +++GG+DQ  N++ G  L    K   +   +T PLL       KM K+L+  I
Sbjct: 184 ----NCDIELGGNDQKFNLLVGRSLQRAYKLNKEQSVMTLPLLEGLDGVHKMSKSLNNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            + +   + Y       +I+D  +  + + L++L + EI  M K Q    N   K +  +
Sbjct: 240 GVTESANTMYA---KILSINDEMMWRYYELLSSLSLQEI-VMLKEQVNTGNAHPKAVKEQ 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +   +  R      A  A   FD       +PT  ++    + G  +  ++V AG   ST
Sbjct: 296 LALEITTRYHNIDLAKQAKIAFDNVFSKDEIPT-DLAVFTCNEGEWIARVLVIAGLCEST 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++ARR +++ A+KIN   I NE+L++ +      G   +  GK+      + 
Sbjct: 355 SQARRDIRAGALKINKEKIMNEELKLSV------GEYIVQIGKRRFAKVIIS 400


>gi|298244240|ref|ZP_06968046.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297551721|gb|EFH85586.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 404

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/426 (22%), Positives = 173/426 (40%), Gaps = 38/426 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
            +  +  +  RG + Q+    +L  L     +   +   +G D T   L  GH      L
Sbjct: 1   MTQLIDYVLTRG-VAQVEKEADLRRLLLEGNNGEPLRIKLGVDPTHYDLTIGHAVVFRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP+ ++G  T+ +GDPS R E+R+ +  +++  N       F   +     +
Sbjct: 60  RQFQQLGHKPVVVIGDWTARLGDPSGRVEARKPLTEEQVNANAATYLDQFFRIVD----R 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +     W  S    D ++ +G + +V +ML  +    R K    +   EF Y +LQ
Sbjct: 116 EKTEVRRQSEWFDSFSLGDAIKLLG-YKTVAQMLERDDFSKRYKSGIEIYLAEFMYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L           LT  L+       KMGK
Sbjct: 175 GYDSVALR----ADVELGGTDQTFNLLVGRELQPTFGQKSQQILTVNLIVGLDGVKKMGK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I +       Y       ++ D  + ++ + LT +   E++   +   +      
Sbjct: 231 SLDNYIAITAPANDMY---GKLMSLPDHAMRTYFEALTDVSTEELNEFERKIQEGTLNPR 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K+ +A EI T  H   EA++A  A +  F        +P+ ++S         ++ L+
Sbjct: 288 DVKRRMAREIVTEFHTLSEAQEAEEAFIRQFSERKLPTDIPSYTVS-----EPTNIVALM 342

Query: 357 VKAGFATSTNEARRHLKSNAIKIN--NS-----IISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V AG A S N+AR  +K   + I           I++ +  + +          L  GK+
Sbjct: 343 VTAGLAASNNKARELIKQGGVSIFLQGESGEATRITDGEFIVPVA-----PGAILKVGKR 397

Query: 410 NHIICH 415
            ++   
Sbjct: 398 QYLRLT 403


>gi|730884|sp|P41256|SYY_THIFE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=TyrRZ;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS
 gi|505366|emb|CAA55643.1| tyrosine--tRNA ligase [Acidithiobacillus ferrooxidans]
          Length = 407

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 95/422 (22%), Positives = 170/422 (40%), Gaps = 29/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQ 56
           M     D    ++  G +  +     L  L         +   +G D TA  LH G    
Sbjct: 1   MTMKHQDAFEQIAF-GTVDMLPEGEMLARLAAAQRDNRPLRIKLGMDPTAPDLHLGAYVL 59

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L      Q  GH+ + ++G  T++IGDP+ +  +R+ +  +E+  N    +      +  
Sbjct: 60  LHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTRKALSREEVVANAATYRPQVFKILDP 119

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   ++ N  WL +++  + L +I + ++V RML  +    R    Q ++  EF Y
Sbjct: 120 ----ERTEVMFNSEWLGALRP-EELIQIAACYTVARMLERDDFNKRYSANQPIAIHEFLY 174

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT 235
            +LQ YD V +       +++GG+DQ  N++ G +L           LT P+L       
Sbjct: 175 PLLQGYDSVAIK----ADVELGGTDQRFNLLVGRELQREYGQKPQLVLTMPILEGLDGVQ 230

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQG 292
           KM K+L            P   +    +I D  +  +   L+ +P  E     + A    
Sbjct: 231 KMSKSLGN---FIAVEDPPAEMFGKIMSISDFLMWRYYALLSRVPAVEQTRLQKEAASGA 287

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           +   + K  +A E+    HG   A++A  A +  F      + +P  +I   E  R   L
Sbjct: 288 RNPRDIKLDLAGELVRRFHGTAAAQEAHIAFLARFQRHETPEDLPLQAIKLSEAPR---L 344

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+V+   A ST+EA R +K  A++++   + +    + L          L FGK++  
Sbjct: 345 SQLLVQVHLAASTSEAMRKMKEGAVRVDWRRVVDPATILAL-----DAVYLLQFGKRHFA 399

Query: 413 IC 414
             
Sbjct: 400 RV 401


>gi|297691534|ref|XP_002823137.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Pongo
           abelii]
          Length = 477

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 205/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-------GIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N   ++                G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRVNARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L     E 
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS----------ISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  + +             S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDEELKELFKEAPFSEFF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N +   I  Q     G   L
Sbjct: 403 LDPGTNVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|294155347|ref|YP_003559731.1| tyrosine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600388|gb|ADE19884.1| tyrosine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 410

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 133/422 (31%), Positives = 226/422 (53%), Gaps = 25/422 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++ ISN  +   L  +G    Y G+D TA SLH G+   ++ L   +K 
Sbjct: 2   NILDDLKARGILNNISNEEKF--LSLKGEPRVYSGFDPTAKSLHLGNYIVILNLLRFKKY 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G KP +L+GG T +IGDPSF+D  R ++  + + EN  KI+     F           ++
Sbjct: 60  GFKPYALIGGATGMIGDPSFKDSERSLLDEKTVLENKTKIRRQLEKF--------GLQVV 111

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +  ++  +D LR +G   +V+ ML+ +SV SR+  E+ LSF EF+Y ++Q YDF +
Sbjct: 112 DNYDFYKNMSVLDFLRNVGKLLNVSYMLAKDSVASRI--ERGLSFTEFSYQLIQGYDFYK 169

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTL-SGA 244
           L  +    +Q GGSDQWGN+  G+++  +LK+  K  A+   LLT +SG K GK+   G+
Sbjct: 170 LNVDEQVEVQCGGSDQWGNLTAGLEIINKLKSENKAVAVALNLLTDSSGNKFGKSTGGGS 229

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+KEM SPYN +Q+  N  D++V    K LT + ++EI+++     +    + A++++
Sbjct: 230 LWLDKEMNSPYNLYQFLLNQPDSEVEKLLKWLTLIDINEINKIINKHNENAKLHYAQEVL 289

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHM--PTISISKD-----EVSRGMGLLTL 355
           A  + + VH + +AEKA       FD ++    +    I I KD     E+ +G  L+  
Sbjct: 290 AFTVVSDVHSKNDAEKAKKLTSILFDKNLDVNTLTIDDIEIMKDGVELIEIKKGQNLVDE 349

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++    +S  EAR  + +N++K+N   +++    +      S     +  GKK   +  
Sbjct: 350 LIRIKVVSSKREAREFITTNSLKLNQEPVND--QTLVHSKLFSNKFAIIHKGKKQLYLAK 407

Query: 416 LC 417
           + 
Sbjct: 408 II 409


>gi|34556682|ref|NP_906497.1| tyrosyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833185|sp|Q7MAH6|SYY_WOLSU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34482396|emb|CAE09397.1| TYROSYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 406

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 181/414 (43%), Gaps = 34/414 (8%)

Query: 13  SERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             RG +++I     +  L      S    +   G+D TA  LH GH   +  +   QK G
Sbjct: 16  IARG-VNEIIGIEYIQSLVERYYKSGETFSIKAGFDPTAPDLHLGHTVLIQKMATFQKHG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                L+G  T++IGDP+ + E+R+ +  +++ +N +  +      +         ++  
Sbjct: 75  AIVTFLIGDYTAMIGDPTGKSETRKPLTREQVLQNAQSYQDQVFKILDPQ----KTVIRF 130

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +    ++  + + FSV RML  +    R K +  +S +EF Y +LQ YD V L
Sbjct: 131 NSEWLEKLGTAGMIE-LTAKFSVARMLERDDFEKRYKSQTPISLVEFIYPLLQGYDSVAL 189

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
               +  ++ GG+DQ  N++ G  L        +   L  P+L       KM K+L   I
Sbjct: 190 ----ESDVEFGGTDQKFNLLMGRHLQRSYGLKKEQSVLMVPILEGLDGVQKMSKSLGNYI 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
            + +E  + Y       ++ D  +  + + L+   + EI       K       +AK+ +
Sbjct: 246 GVTEEPNTMYAKV---LSVSDELMWRYYELLSAKSLDEIHKLQEDVKSGNYHPKKAKEDL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EITT  H  ++A +A     + F        MP + ++ +     + +   +V+ G +
Sbjct: 303 ALEITTRYHSEQDALQAKEEFDKVFARDEIPSEMPELGVTGE-----IWICKAMVEGGIS 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ST++ARR +++ ++KIN + + +   Q+        G   +  GK+  +   +
Sbjct: 358 PSTSQARRDIQAGSVKINQTKVEDINQQLGH------GEHIIQVGKRKFLRLIV 405


>gi|189219580|ref|YP_001940221.1| Tyrosyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186438|gb|ACD83623.1| Tyrosyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 386

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/402 (23%), Positives = 165/402 (41%), Gaps = 30/402 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    ++      +L     +    G D T+ +LH GH   L+ L   Q  GH+ + ++
Sbjct: 10  RGTEQVVTTEELEKLLSLDRRLRIKFGVDPTSPNLHLGHAVSLLKLRQFQDFGHQVLLVI 69

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS R+ +R ++  ++I  N +         +     +    +  N  W   
Sbjct: 70  GDFTASIGDPSGRNSTRPVISREQILNNAKTYTDQAFKILD----RERTEIFFNGEWFNE 125

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    LL  +    +VN +L  +    R+ ++QS+   EF Y +LQA+D V++       
Sbjct: 126 MSAERLLF-LARRVTVNHLLHRQDFHDRISKDQSIFLHEFFYPLLQAWDSVKIC----AD 180

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG DQ  N++ G D  +         +T P+L       KM K+L   I L     S
Sbjct: 181 VEIGGKDQIFNMLLGRDFQKDEGMTPQVVMTLPILEGLDGTKKMSKSLGNDIGLT---DS 237

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
           P   +    +I DA +  +   L    +               E KK +A +I ++ + +
Sbjct: 238 PKEMFGKTMSISDALMKRWFLVLFGEQLDP--------LCNPMEEKKRLAEKIVSLFYSK 289

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           EEA KA       F      + MP  S  +    + M ++ L+V  G   S +EARR + 
Sbjct: 290 EEALKARNEFERIFSRREIPEEMPKFSFPQ----KTMPIVELLVAVGAVKSKSEARRLIS 345

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              +      +++    I+L+         L  GK+     +
Sbjct: 346 QGGVDFQGERVTDVHKVIELK-----KGSILKCGKRFFAQVN 382


>gi|115378697|ref|ZP_01465845.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310822372|ref|YP_003954730.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115364283|gb|EAU63370.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395444|gb|ADO72903.1| Tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 420

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 87/421 (20%), Positives = 163/421 (38%), Gaps = 36/421 (8%)

Query: 13  SERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             RG +           L         +    G+D     LH GH   L  +   Q  GH
Sbjct: 18  VTRGTVDLQVAEELKKKLERSYREGKPLIIKAGFDPNRPDLHLGHSLLLTRMRRFQDFGH 77

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + L+G  T++IGDP+ ++ +R  +  +E++ N E  K      +         ++  N
Sbjct: 78  TVVFLIGDFTALIGDPTGKNVTRPPLSREEVKANAETYKQQVFKVL----HAERTVVRFN 133

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL      + +  + + +SV RML  +  + R +  +S++  EF Y +LQ YD V L 
Sbjct: 134 SEWL-DALGTEGMIRLAARYSVQRMLERDDFKKRFRDNRSIALHEFLYPLLQGYDSVALK 192

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS---------GTKMGK 239
                 +++G +DQ  N++ G  L +         +T P+L             G KM K
Sbjct: 193 ----ADVELGATDQLFNLLVGRQLMKEQGMEPQVIMTGPILEGLDAKLVDGKITGEKMSK 248

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEIN 296
           +L   + +N+        +    +I D  +  + + L+  P+ EI  +            
Sbjct: 249 SLDNYVGINEP---AEQIFGKLMSITDDLMWRYYELLSARPLKEIQALKASVESGQSHPK 305

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTL 355
            AK   A EI +   G E   +AA      F      ++ +P + +   E +  + +  +
Sbjct: 306 AAKVAFAQEIASRFQGDEAGRRAAEDFEARFKNKQLDTESLPLVEVPM-EGAAKLLVTKV 364

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +     S+ EAR+ +    ++I    +++ K ++        G   +  GK       
Sbjct: 365 LPETKLVASSTEARKLMAQGGVRIAGEKVTDPKAELGP------GEYLVQVGKLKAARVK 418

Query: 416 L 416
           L
Sbjct: 419 L 419


>gi|297172808|gb|ADI23772.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF4000_43P14]
          Length = 399

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/408 (23%), Positives = 170/408 (41%), Gaps = 22/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I      + + S   +    G+D TA  LH GH   +  L   Q+ GH  +
Sbjct: 10  LLRRGADEIIQEDELRERIASGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQELGHHVM 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +  +EI+ N E  K      +          ++ N TW
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLTPEEIERNAETYKEQVFKILDP----EKTEVVFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +     + ++ S ++V RML  +    R +  Q ++  EF Y ++Q YD V +    
Sbjct: 126 MNQVGA-AGMIKLASQYTVARMLERDDFDKRYRANQPIAVHEFLYPLVQGYDSVAM---- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G  L +         LT P+L       KM K+L   + +N  
Sbjct: 181 EADVELGGTDQKFNLLMGRTLQKAYGQAPQICLTMPILEGLDGVQKMSKSLKNYVGVN-- 238

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS--EIDRMAKLQGKEINEAKKIIATEITT 308
             +P   ++   +I D     + + L+ L     E  +    +     EAKK  A E+ T
Sbjct: 239 -DAPGEMYRKLLSIPDDMTWRYYELLSGLSNEALEERKAEAERLGSPQEAKKAFALEMVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG   A+ A ++A     +     ++P +     E    + ++ L+  AG A +   A
Sbjct: 298 RFHGEAAAQAAPSSAGNLTALGAIPDNVPEVE-VVLEEGDEVHVVPLLRLAGLAQNGKAA 356

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +      A+ ++   ++ E+       F    +  +  GKK      +
Sbjct: 357 KDVFGRGAVYVDGQQLTEERT------FARGESAVIQAGKKKIARVTI 398


>gi|148926262|ref|ZP_01809947.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205356288|ref|ZP_03223054.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|145845433|gb|EDK22526.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205345893|gb|EDZ32530.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 401

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 179/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIEKLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGA-AGIVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKE 294
            K+L+  I + ++    Y       +I D  +  + + L+   + E   I +  +     
Sbjct: 232 SKSLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKKDIEQSNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|57238143|ref|YP_179393.1| tyrosyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81353426|sp|Q5HTJ2|SYY_CAMJR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57166947|gb|AAW35726.1| tyrosyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058704|gb|ADT73033.1| Tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 401

 Score =  270 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 178/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIEKLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGA-AGIVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKE 294
            K+L+  I + ++    Y       +I D  +  + + L+   + E   I +  +     
Sbjct: 232 SKSLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKKDIEQSNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++      +   G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQM------YLKQGEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|297182498|gb|ADI18660.1| tyrosyl-tRNA synthetase [uncultured Acidobacteria bacterium
           HF4000_26D02]
          Length = 411

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 160/405 (39%), Gaps = 29/405 (7%)

Query: 20  QISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
            +    EL          +  +   +G+D TA  LH GH   +  +   Q  GH  I L+
Sbjct: 21  DVLRESELRSKLELSARTKKPLVVKVGFDPTAPDLHLGHTVLIRKMKHFQDLGHTIIFLI 80

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ R ++R  +   EI EN E  K    + +         ++  N  WL +
Sbjct: 81  GDFTGLIGDPTGRSKTRPPLSRAEIDENAETYKRQVFALLDPA----RTVVEFNSRWLGA 136

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   + +  + + ++V +ML     R R  +   ++  EF Y + QAYD V L       
Sbjct: 137 LTSEEWI-RLAARYNVAQMLERRDFRQRYDKGLPIAIHEFLYPLAQAYDSVRLK----AD 191

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N+  G D+           +T PLL       KM K+    + + +    
Sbjct: 192 VELGGTDQLFNLNVGRDIMPAFGVGPQVVMTIPLLVGLDGVEKMAKSAGNYVGITEP--- 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATEITTMV 310
           P   +    +I D  + S+ + LT L + EI  +              K  +   I T  
Sbjct: 249 PDEMFGKLMSISDVLMWSYYELLTDLTVLEIGALKTRVAAGDLHPKRTKLDLGRRIVTDF 308

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  E A +A       F        +    +     + G  L+ ++V  GFA S + A R
Sbjct: 309 HSAEAAAEAEREFERRFAGKALPSKLDGQVVEVP--ANGARLVAVLVDVGFAESNSAATR 366

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +   +++++   +++   ++    F       L  GK+  I   
Sbjct: 367 LIVQGSVRVDGERVTDRSHRVAAVPF------VLQVGKRRVIRVR 405


>gi|219667597|ref|YP_002458032.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219537857|gb|ACL19596.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 410

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 29/405 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N  EL    ++       +   +G D +A  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VSMLVNAEELKNKLAESHKNRRPLVIKLGLDPSAPDIHLGHAVVLRKIKQLQDLGHEAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDPS + + R  +  ++++EN           +     K    +  N  WL
Sbjct: 75  VIGDFTGKIGDPSGKAKGRTALSDEQVKENARTYFEQIFKVLD----KEKTTVRYNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + + ++ +  +V RML  +  + R      +   EF Y ++QAYD V L     
Sbjct: 131 SKLNF-EDVLKLAATTTVARMLERDDFQKRFSGNVPIGIHEFFYPLMQAYDSVALQ---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI+ G  L + +  P+  A+  PLL       KM K+L   I + +  
Sbjct: 186 TDIELGGTDQTFNILMGRTLQKAMGQPQQIAMFMPLLEGLDGVEKMSKSLGNYIGVYEPA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTM 309
              +   +    + D  ++ + +  T      I+  R+   QGK   + K  +A  IT +
Sbjct: 246 PVMF---KKVMEVPDPLILKYFELATDEHPDRIEAFRVELAQGKNPRDVKYALAEIITRL 302

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  ++   A       F        +P + +     SR + L+ L+V++GF  S  E R
Sbjct: 303 YHTEQDVMTAKAYYEAAFSKKAIPAQLPVLPVKAR--SRLIELVPLLVQSGFTASNGEFR 360

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           R ++   +++N   IS+    +   D        L  GKK  +  
Sbjct: 361 RLVQQGGVQLNQQKISDLDRVLADGD-------VLKIGKKCFVKI 398


>gi|94681057|ref|NP_001035526.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|50401709|sp|Q9Y2Z4|SYYM_HUMAN RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|10436334|dbj|BAB14806.1| unnamed protein product [Homo sapiens]
 gi|15990482|gb|AAH15625.1| Tyrosyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119608923|gb|EAW88517.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
 gi|119608924|gb|EAW88518.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
 gi|123992774|gb|ABM83989.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [synthetic construct]
 gi|123999518|gb|ABM87314.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [synthetic construct]
          Length = 477

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 203/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-------GIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N   ++                G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L     E 
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N +   I  Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|154322040|ref|XP_001560335.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Botryotinia
           fuckeliana B05.10]
 gi|150850414|gb|EDN25607.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Botryotinia
           fuckeliana B05.10]
          Length = 693

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 128/489 (26%), Positives = 217/489 (44%), Gaps = 73/489 (14%)

Query: 2   PAFKSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              K   LSIL ERG++HQI+ +  ELD   ++  + AY+G D TA SLH GHL   M L
Sbjct: 61  TGKKKSMLSILEERGYVHQITGSRDELDRAMTENRLGAYVGVDPTAPSLHVGHLLPFMSL 120

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------ 114
           FW+   G+  +SL+GG T+ IGDP+ R  +R  M+S    ENI K+              
Sbjct: 121 FWMYIHGYHTVSLVGGATAKIGDPTDRLTTREKMKSTTRNENILKMHYQLKGIWLNVEAY 180

Query: 115 --KYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
             KYG     A    ++NN  W+  +  ++LL+ +G    +  M++ ++V++++     +
Sbjct: 181 GRKYGYQWEWAWRRGLVNNHHWMNKLTVMELLQILGPGMRIGAMIAKDTVKNKMNNGDGM 240

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE--------------R 215
           S+ EF+Y +LQ++D+  +       +Q+GGSDQ+GNI  GID  +               
Sbjct: 241 SYSEFSYPLLQSWDWWHMYNTKGITMQIGGSDQYGNITAGIDAVKYILANHPDPVVKEQH 300

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
            K       T PLLTT++G K GK+   A+WL+K+M S ++ + Y+    D DV  + K 
Sbjct: 301 KKAVPPIGFTVPLLTTSAGAKFGKSAGNALWLDKDMMSSFDLYAYFLRTSDQDVERYLKL 360

Query: 276 LTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T +PM +I++  +         +A+  +A +   ++HG  +A+ A       F  S +S
Sbjct: 361 FTFMPMEQINKTMEEHMKEPHSRKAQHALARDFLELIHGVPDAKAAELKHRLLFSKSSNS 420

Query: 334 QHMPTISISKDEVSRGM------------------------------GLLTLIVKAGFAT 363
            ++  +    + V   +                               +  ++V AG   
Sbjct: 421 ANVEELQRDLESVEGTVTSGETKTGNINASNRPKADLKLPRSFVMTRSIARIVVAAGLCA 480

Query: 364 STNEARRHLKSNAIKINNSII-----SNEKLQIKL----------QDFDSTGNIKLSFGK 408
           + +EA R   ++ + +  S        ++ L                      + L  GK
Sbjct: 481 TASEANRLCGASGLYVGGSRPLGYQGKDDALVFTPIKTWKNSDTHHYIIDGSMLVLRRGK 540

Query: 409 KNHIICHLC 417
            N  I  + 
Sbjct: 541 SNIRIIKIV 549


>gi|223039857|ref|ZP_03610141.1| tyrosyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878866|gb|EEF13963.1| tyrosyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 402

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 92/423 (21%), Positives = 169/423 (39%), Gaps = 37/423 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M   K            + +I +   +  L               G+D TA  LH GH  
Sbjct: 9   MSDIKKG----------VAEIIDEERVANLVKNYYEKGENFYVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  + +LQK G     L+G  T  IGDPS + ++R+ +  + +  N +  +      + 
Sbjct: 59  VLQKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSQTRKKLDRETVMANAKTYEEQVFKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    ++ N  WL  +     + E+ S F+V RML  +    R K   S+S  EF 
Sbjct: 119 PQ----KTKLMFNSRWLNELGA-AGIVELASTFAVARMLERDDFEKRYKSGASISISEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-AS 233
           Y +LQ YD V +     C ++MGG+DQ  N++ G  L        +   +  PLL     
Sbjct: 174 YPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRIYNVGKEQAVIMMPLLEGLDG 229

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   I + +    P   +    ++ D  +  + + L+     +I  +      
Sbjct: 230 VNKMSKSLGNYIGVTEG---PNEMFAKILSVSDELMWRWYELLSEKSAEKIANLKS--DV 284

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              +A      E   +        +AA    +     +HSQ++    + +  ++  + ++
Sbjct: 285 ASGKAHPKAVKEALALEITTRYNGEAAAKEAKAEFDRVHSQNLIPTEMEEFGLAAPVWIV 344

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +   G   S+++ARR + +NA+ +N   I++E+L++ +      G   L  GK+    
Sbjct: 345 HALTHCGLCASSSQARRDIAANAVSLNQEKIADEQLKLGV------GEYVLQVGKRKFAK 398

Query: 414 CHL 416
             +
Sbjct: 399 LKV 401


>gi|86150053|ref|ZP_01068281.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596533|ref|ZP_01099770.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562883|ref|YP_002344662.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81549167|sp|Q9PN27|SYY_CAMJE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85839499|gb|EAQ56760.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191374|gb|EAQ95346.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360589|emb|CAL35386.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926496|gb|ADC28848.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315927103|gb|EFV06454.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929604|gb|EFV08788.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 401

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 179/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  K      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYKTQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGA-AGIVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKE 294
            K+L+  I + ++    Y       +I D  +  + + L+   + E   I +  +     
Sbjct: 232 SKSLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|119509109|ref|ZP_01628260.1| tyrosyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119466275|gb|EAW47161.1| tyrosyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 435

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 88/404 (21%), Positives = 166/404 (41%), Gaps = 33/404 (8%)

Query: 15  RGFIH---QISNPRELDILCSQG------VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG +    Q ++    +    +        +   +G D T S +H GH   +  L   Q 
Sbjct: 42  RGIVEIFPQPTDVDGENESLEKRLVTTNRPLRIKLGIDPTGSDIHLGHSIPVRKLRAFQD 101

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  + ++G  T+ IGDP+ + E RR +   ++ +N +         + + T      +
Sbjct: 102 AGHTAVLIIGDFTARIGDPTGKSEVRRQLTEADVAQNAQTYLDQVRPILDFDTP-GRLEV 160

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  +    +L  + +  +V +ML+ E    R K+E  +   EF Y ++Q YD V
Sbjct: 161 RYNSEWLSGLDLGKILELLSTM-TVGQMLAKEGFAERYKKENPIFIHEFLYPLMQGYDSV 219

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGA 244
            +    +  +++GG+DQ  NI  G DL         F L  P+L  T    KM K+LS  
Sbjct: 220 AV----EADVELGGTDQKFNIAVGRDLQRHFGQKPQFGLLLPILIGTDGVQKMSKSLSNY 275

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L++    P   +Q  + + D  +  + + LT LP+ ++            + + ++A 
Sbjct: 276 VGLSEH---PAQKYQKLQGVPDNLLSQYFELLTDLPLEKLPE-------NPRDRQMLLAW 325

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+    +G      AA  A +          +P  S+S+      + L +L+   G   S
Sbjct: 326 EVVKQYNGE----IAANEAKDAAKSGGKEGTVPEFSLSEVS-EFPVKLASLLNVTGLCKS 380

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           T E +R ++   ++++   +++     +           L   K
Sbjct: 381 TGEGKRKIQEGGVRLDGDRMTDIDTTFEQPSELHGR--VLQVVK 422


>gi|153951241|ref|YP_001397639.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938687|gb|ABS43428.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 401

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 179/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIEKLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGA-AGIVELASTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRIYSIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKE 294
            KTL+  I + ++    Y       +I D  +  + + L+   + E   I +  +     
Sbjct: 232 SKTLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|94970096|ref|YP_592144.1| tyrosyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94552146|gb|ABF42070.1| tyrosyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 413

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 100/404 (24%), Positives = 170/404 (42%), Gaps = 29/404 (7%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I    +L     +       +    G+D TA  LH GH   +  L   Q  GH  I L
Sbjct: 19  AEIIRESDLRERLEKSRQSGKPLRVKAGFDPTAPDLHLGHTVLMRKLKHFQDLGHTVIFL 78

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  TS+IGDP+ R  +R  +  ++I +N E  K      +          +  N  WL 
Sbjct: 79  IGDFTSLIGDPTGRIATRPPLTREQIDQNAETYKAQVFKILD----GAKTEVRFNSEWLG 134

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + Y + L  + + F+V++ML  +    R   E+ ++  EF Y + QAYD V L    + 
Sbjct: 135 KLDY-EKLIRLTAKFTVSQMLERDDFHKRYTDEKPIAMHEFLYPVAQAYDSVCL----EA 189

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G +L      P    LT PLL  T    KM K+    I + +   
Sbjct: 190 DVELGGTDQKFNLLMGRELQRHYNQPSQIVLTMPLLEGTDGVQKMSKSYGNYIGITEA-- 247

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATEITTM 309
            P   +    +I DA +  + + LT +   EI+ +            + K+ +   I   
Sbjct: 248 -PEEMFGKVMSISDALMWRYYELLTDVKTEEIEALKAKVAAGEAHPMKVKQDLGKIIIRD 306

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV----SRGMGLLTLIVKAGFATST 365
            H  E AE AA    + F        +  ++++  ++       + L  ++ KAG A S 
Sbjct: 307 FHNAEAAEHAAENWSKQFQKKEVPDELEEVALTAADIGLDGGTSVRLDRVLAKAGLADSM 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +A R +K  A++I++ + S   L I            +  GK+
Sbjct: 367 TDAGRKIKVGAVRIDSEVASAPHLTIAG---LPASW-VIRVGKR 406


>gi|332257527|ref|XP_003277855.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 477

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 202/431 (46%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-------GIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + +  ++ N   ++                G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETDRVRANARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYEKRHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L     E 
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTKALYHSSIDALEVMSDQELKELFKEAPFSEFF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N +   I  Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|299136282|ref|ZP_07029466.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602406|gb|EFI58560.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 430

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 108/388 (27%), Positives = 171/388 (44%), Gaps = 29/388 (7%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +    G+D TA  LH GH   +  L   Q+ GH  I L+G  T++IGDP+ ++++R+ +
Sbjct: 51  PLRIKAGFDPTAPDLHLGHTVLMRKLRHFQQLGHTVIFLIGDSTALIGDPTGKNQTRKPL 110

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             +EI  N E  K      +     +    +  N  WL  + Y   + ++ + F+V++ML
Sbjct: 111 TREEIDVNAETYKDQVFKILD----REKTEVRYNSEWLDKLGY-AGMVKLAAKFTVSQML 165

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R + EQ +   E  Y + Q YD V L    +C +++GG+DQ  N++ G DL  
Sbjct: 166 EREDFHKRFQEEQPIHVHELLYPMAQGYDSVAL----ECDVELGGTDQKFNLMRGRDLQR 221

Query: 215 RLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    L +P+L       KM K+L  AI +       Y       +I+D  +  + 
Sbjct: 222 DAGQKPQIILMTPILEGLDGVQKMSKSLGNAIGIKDPAPEMY---GKLMSINDELMWRYW 278

Query: 274 KRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
             LT LP S+ID M +   K      +AKK +A  IT   H   EA+ AA +    F   
Sbjct: 279 TFLTDLPQSQIDAMRESVEKGELHPMQAKKNLAHAITADFHTATEADTAAESWATQFQQK 338

Query: 331 IHSQHMPTISISKD---------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             S+ +P +++S           E +  + +  L+  AG A S  EA R L  NA+ IN 
Sbjct: 339 GVSEDVPEVAVSLSAEGLHASSVEGTSELRIAKLLQLAGLAASAGEATRKLGENAVSING 398

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKK 409
              +     +  +         L  GKK
Sbjct: 399 EKFN--GKTLSKESLGEAPT--LRLGKK 422


>gi|254584550|ref|XP_002497843.1| ZYRO0F14784p [Zygosaccharomyces rouxii]
 gi|238940736|emb|CAR28910.1| ZYRO0F14784p [Zygosaccharomyces rouxii]
          Length = 458

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 126/439 (28%), Positives = 212/439 (48%), Gaps = 31/439 (7%)

Query: 8   FLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  L  RG I Q++ P + L    SQG  +  Y G D TA SLH G++  LM+L     
Sbjct: 20  LLEDLKLRGLIAQVAQPEQWLHEKLSQGHKIKLYCGADPTAKSLHLGNVVPLMILLNFYV 79

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------- 118
            GH   +L+GG T  +GDPS R   R+ M      +N+++I+  F+ F + G        
Sbjct: 80  KGHDVFALVGGATGRVGDPSGRTTERQGMSDDSRLDNVDRIQQQFTRFFENGWKYYESRF 139

Query: 119 ------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                 G    + ++N  W   IK +D L + G    V  M S  S+ SR++ +  L F 
Sbjct: 140 PQISARGPGRLVKVDNYHWWKDIKLLDFLAQYGRHIRVQSMFSRSSIASRIEGKDGLGFN 199

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-----KLFALTSP 227
           EF Y +LQAYDF  L K +   LQ+GG+DQWGNI  GID  +R+ +          +T+P
Sbjct: 200 EFTYQVLQAYDFYHLYKTHGVSLQVGGNDQWGNITAGIDFIDRVVSSSSDKLSPGGITAP 259

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR- 286
           LL+T++G K GK+   AI+L+ ++ + Y+ +Q++ N  DADV  F K  T LP+  I   
Sbjct: 260 LLSTSTGEKFGKSAGNAIFLDPQINTAYDIFQFFYNTKDADVCRFLKIFTLLPLETISTV 319

Query: 287 -MAKLQGKEINEAKKIIATEITTMVH----GREEAEKAATAAMECFDMSIHSQHMPTISI 341
               ++   + + ++ +A E+T ++     G   ++ +        + ++ +  +  +  
Sbjct: 320 VQDHMEQPHLRKGQRFLAKEVTDLLFGVGSGERSSKVSEVLFGHVSEANMSADELIKLFS 379

Query: 342 SKDEVSR---GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
               + +   G  L+ +I +     S +EARR L   ++ +++S +   E +    Q   
Sbjct: 380 EAKILQKVPRGQSLVDIITQVAPC-SKSEARRKLSQGSVLLHSSKLKVTENIDQLGQFLI 438

Query: 398 STGNIKLSFGKKNHIICHL 416
               + L  GK+   +  +
Sbjct: 439 DDKVLILRIGKQKCHVIEI 457


>gi|55667251|ref|XP_528727.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial isoform 2 [Pan
           troglodytes]
          Length = 477

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 204/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-------GIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N   ++                G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W    + +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYQKQRLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L     E 
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N +   I  Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|298491061|ref|YP_003721238.1| tyrosyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232979|gb|ADI64115.1| tyrosyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 418

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 88/394 (22%), Positives = 161/394 (40%), Gaps = 28/394 (7%)

Query: 25  RELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
             L+     +   +   +G D T + +H GH   +  L   Q  GH  + ++G  T+ IG
Sbjct: 47  ESLEKRLVNANRPLRVKLGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIG 106

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DP+ +   R  +   ++ +N +         + + T  +   +  N  WL  +    +L+
Sbjct: 107 DPTGKSHVRCQLTEGDVAQNAQTYLDQVRPILDFDTPGS-LEVRYNSEWLSRLDLGKVLQ 165

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            + +  +V +ML+ E    R K+E  +   EF Y ++QAYD V      +  +++GG+DQ
Sbjct: 166 LLSTM-TVGQMLAKEGFAERYKKENPIFLHEFLYPLMQAYDSVAT----EADVELGGTDQ 220

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             NI  G DL         F L  P+L  T    KM K+L+  + L++    P   +Q  
Sbjct: 221 KFNIAVGRDLQRHFGLKPQFGLLLPILIGTDGVRKMSKSLNNYVGLSEH---PSQKYQKI 277

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           + + D  +  + + LT LP+  +              ++ +A EI    HG   A    T
Sbjct: 278 QAVPDNLLSQYFELLTDLPLDSLPE-------NPRARQEFLAWEIVRQYHGEVAA----T 326

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
            A E          +   S++   V   + L  ++   G   ST E +R ++   ++++ 
Sbjct: 327 EAKEAAKSGGKEGTLLEFSLAAI-VQFPVKLAFILGATGLCKSTAEGKRKIQEGGVRLDG 385

Query: 382 SIISNEKLQI-KLQDFDSTGNIKLSFGKKNHIIC 414
             +++         D        L  GKKN +  
Sbjct: 386 EKVTDADTTFAAPGDLYFK---VLQVGKKNFVRL 416


>gi|323695192|ref|ZP_08109316.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323500754|gb|EGB16692.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 324

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 135/289 (46%), Positives = 182/289 (62%), Gaps = 6/289 (2%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              K      L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+ 
Sbjct: 38  SNMK--IYEELVARGLIAQVTNEEEIGNMINEGKATFYIGFDPTADSLHVGHFMALCLMK 95

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  G+KPI+L+GGGT +IGDPS R++ R+MM  + IQ N +  K   S FI +  G  
Sbjct: 96  RLQMAGNKPIALLGGGTGMIGDPSGRNDLRQMMTVETIQHNCDCFKQQMSRFIDFSEG-- 153

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A+M+NN  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q+
Sbjct: 154 KAMMVNNAEWLMGLNYVELLREVGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQS 211

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF  L + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT 
Sbjct: 212 YDFYMLFQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQ 271

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
           SGA+WL+   TSP+ F+QYWRNI DADV+   + LT LP+ +I+ M K 
Sbjct: 272 SGAVWLDPNKTSPFEFYQYWRNIADADVLKCLRMLTFLPIEQINEMDKW 320


>gi|121613329|ref|YP_001000947.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005857|ref|ZP_02271615.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249722|gb|EAQ72681.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 401

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 179/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGA-AGIVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKE 294
            K+L+  I + ++    Y       +I D  +  + + L+   + E   I +  +     
Sbjct: 232 SKSLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITEHFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|86150966|ref|ZP_01069182.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315124728|ref|YP_004066732.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85842136|gb|EAQ59382.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315018450|gb|ADT66543.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 401

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 179/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGA-AGIVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKE 294
            K+L+  I + ++    Y       +I D  +  + + L+   + E   I +  +     
Sbjct: 232 SKSLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|297171004|gb|ADI22019.1| tyrosyl-tRNA synthetase [uncultured myxobacterium HF0200_01L06]
          Length = 408

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 93/426 (21%), Positives = 161/426 (37%), Gaps = 29/426 (6%)

Query: 1   MPAFKSDFLSILSE-RGFIHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHL 54
           M A + +    L   R          EL       L     +   +G D ++  LH GH 
Sbjct: 1   MSAERREVERQLERMREGAVDFIGEEELAGRLERALGEGRPLRVKLGMDPSSPDLHLGHA 60

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             L  L   Q+ GH PI L+G  T+ IGDPS + ++R  +  +E+  N        +  +
Sbjct: 61  VVLEKLRIFQELGHTPIFLIGDFTARIGDPSGKKKTRPPLGDKEVTANAATYVSQVAKML 120

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                   A +  N  W+           + S  +V+R+L  +    R   +  ++  EF
Sbjct: 121 DAD----AAEIRFNSEWM-DAMTPQDFVRLCSHTTVSRLLERDDFSKRYAAQTPIAVHEF 175

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTAS 233
            Y  +QAYD V L    +  +++GG+DQ  N++ G ++           +T PLL  T  
Sbjct: 176 LYPFVQAYDSVAL----EADVELGGTDQTFNLLMGREIQRAYGKAPQAVITHPLLVGTDG 231

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L  +I L   +  P   +    +I DA +  +   L      E+   +K    
Sbjct: 232 HEKMSKSLGNSIAL---LDPPEEIYGKIMSISDALLPDYVAMLPIPRNEELLSASKAVVS 288

Query: 294 EINE---AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
              +    K  +A  +    +    +E AA               +     S    +  +
Sbjct: 289 GAGDPLALKHELARRVVERFYDAGSSEGAADHFRRVVQERGKPTEVAQYEYSLA-GAETV 347

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            LL L+   G A S  E RR +   A+ +++  +S+  L +        G+  L  G++ 
Sbjct: 348 SLLDLVDHLGLAGSRGELRRLVSQGAVSVDDERVSDPLLALGA------GSYLLKLGRRR 401

Query: 411 HIICHL 416
                +
Sbjct: 402 FAQVQI 407


>gi|86153123|ref|ZP_01071328.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|157415535|ref|YP_001482791.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|85844008|gb|EAQ61218.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|157386499|gb|ABV52814.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748175|gb|ADN91445.1| Tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932421|gb|EFV11364.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 401

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 179/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGA-AGIVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKE 294
            K+L+  I + ++    Y       +I D  +  + + L+   + E   I +  +     
Sbjct: 232 SKSLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|284931537|gb|ADC31475.1| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 415

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 123/426 (28%), Positives = 213/426 (50%), Gaps = 26/426 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+S L +R  I QISN  +L +         Y+G+D +  SLH G+L  +++L +L+K 
Sbjct: 2   DFISELKKRNIIKQISNEEKLALALKNQK-GVYVGFDPSGESLHLGNLIPIIVLRYLKKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPS +   R++   ++I  N  KIK     +       T A ++
Sbjct: 61  GFKTYAILGGATGLIGDPSGKTSERKVQDYEKITANANKIKVQLERY-------TQAKII 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  +  ++  ++ LR+ G   ++  +L  E +RSR+  E  +S+ EF+Y I+Q +DF+ 
Sbjct: 114 NNIDFYQNMNLLNFLRDTGKLINIGYLLDKEFIRSRI--ENGISYAEFSYNIIQGHDFLH 171

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL----FALTSPLLTTASGTKMGKTLS 242
           L + YD ++Q GGSDQWGNI  GIDL +R    +       LT  LL   +G K GK+  
Sbjct: 172 LYEQYDVQVQCGGSDQWGNITTGIDLIKRKYGEEKTPYLCGLTFNLLLNPNGNKFGKSEQ 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVS-FAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
           GA++L++ +T PY  WQY  N DD  ++    + +    + ++  + +     K+   A+
Sbjct: 232 GALYLDENLTHPYLIWQYIYNQDDQFIIDLIHRYVLDQSLEQLQELIEAHLANKKTRIAQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-----ISISKDEVSRGMG--L 352
           K +A  +   +H +E  +         FD  +             S  K E+ R     +
Sbjct: 292 KFLADYLVKFIHSQEHLDTVHKMNKALFDNQLDQLSDQEKLVVFASFDKVELDRNQSFMV 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +++A  A S    R  +   +I+I++  I++ + Q+ ++         +  GKKN+ 
Sbjct: 352 IDFLLQAKVADSKRILRELIAQGSIQIDDLKITDPQAQLNVR--KDQQLTVIKKGKKNYF 409

Query: 413 ICHLCG 418
           I    G
Sbjct: 410 IVVWKG 415


>gi|328788186|ref|XP_624409.2| PREDICTED: probable tyrosyl-tRNA synthetase, mitochondrial-like
           isoform 1 [Apis mellifera]
          Length = 441

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 128/412 (31%), Positives = 206/412 (50%), Gaps = 21/412 (5%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +  L        Y G+D TA SLH G+L  L+ L   Q+ GH+ I L+GG T +IGDPS+
Sbjct: 30  IKKLWKSPPQCIYAGFDPTAESLHIGNLLILINLLHWQRCGHEVIILLGGATGLIGDPSY 89

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTGKTDALMLNNETWLCSIKYI 138
           R + R  +    ++EN+E I+    + I        K         +LNN  W   +  +
Sbjct: 90  RKKERVEIDQIILKENLECIRNDIKTIIRNHTQYFCKNHNHLIPIKILNNLQWYKDMNLL 149

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             ++++G +F +  ML   SVR+RL+ +  +SF EF Y I Q YD++ L + Y+C  Q+G
Sbjct: 150 SFIKDVGKYFRMGTMLGRTSVRARLESDNGMSFTEFTYPIFQGYDWLHLQRTYNCNFQVG 209

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           G DQ GNII G DL  +    +++ LT PL+T   G K GK+   AIWL+   +S +  +
Sbjct: 210 GQDQMGNIISGYDLVTKYTKNQVYGLTLPLITAEGGKKFGKSTGNAIWLSPAKSSSFQLY 269

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEA 316
           QY+  ++DADV  F    T LP+ +I ++ +   K+     A++ +A ++T +VHG    
Sbjct: 270 QYFMRVEDADVEKFLHFFTFLPLVKIKKIIEEHFKKPELRIAQRNLAEKVTILVHGEAGL 329

Query: 317 EKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             A  A+   +D SI S            +   ++ +     G+ +  L +KA    S  
Sbjct: 330 IAAKRASAILYDKSIDSLAKMNANELVQILEGANLIELLSEPGINVYELAMKANCFKSDY 389

Query: 367 EARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +ARR +++    IN   I+N E++ +      +     L  GKK + I H  
Sbjct: 390 DARRIIEAGGFYINYQKITNMEEVVVPGIHILNNNISLLRVGKKTYHIVHWI 441


>gi|283956666|ref|ZP_06374145.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791915|gb|EFC30705.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 401

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 179/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGA-AGIVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKE 294
            K+L+  I + ++    Y       +I D  +  + + L+   + E   I +  +     
Sbjct: 232 SKSLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLER------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|162448779|ref|YP_001611146.1| hypothetical protein sce0509 [Sorangium cellulosum 'So ce 56']
 gi|161159361|emb|CAN90666.1| tyrS [Sorangium cellulosum 'So ce 56']
          Length = 409

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 93/414 (22%), Positives = 178/414 (42%), Gaps = 33/414 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL + G +         + +     +    G+D T   LH GH   +  +   Q+ GH
Sbjct: 8   LQILCK-GVVDLHVRAELEERIREGKPLRVKAGFDPTRPDLHLGHTVVMQKMREFQELGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+++GDP+ ++E R  +  +E+    E  +      +     K    +  N
Sbjct: 67  HVVFVVGDFTAMVGDPTGKNELRPRLSREEVVAAAETYQAQAFKVLD----KNRTEVRYN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    ++  + + ++V RML  +  + R +  + +   EF Y +LQAYD VEL 
Sbjct: 123 SEWLNKLDPTQMIE-LCAKYTVARMLERDDFKKRYEEARPIYVHEFMYPLLQAYDSVEL- 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS---------GTKMGK 239
              +  +++GG+DQ  N++   DL  R        +T PLL   +         G KM K
Sbjct: 181 ---EADIELGGTDQLFNLLVARDLMPRYGKRAQMVMTMPLLEGTNARVEDGKVVGAKMSK 237

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEIN 296
           +    + + +    P++  Q    +DD  +  + + L++ P  EI           + + 
Sbjct: 238 SADNYVGITEP---PFDMLQKLMLVDDGVIWRYMELLSSRPPEEIAALREAVLRGEQGVI 294

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             K++ A EI T  H  E+A +AA             +++  + ++ D     + +   +
Sbjct: 295 GVKELFAQEIVTRFHSAEDA-RAALERRRSVAAGGLPENIEELQVASDR--DTIPIGNAL 351

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             AG A ST+ ARR +K  A+ +   ++ +E+L+++           +  G KN
Sbjct: 352 ALAGLAESTSAARRLVKGGAVHLEGEVVKDEQLKLER-----GKRYLVRVGSKN 400


>gi|328955875|ref|YP_004373208.1| tyrosyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456199|gb|AEB07393.1| tyrosyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 406

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/404 (24%), Positives = 173/404 (42%), Gaps = 20/404 (4%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    +        L     +   +G D T+S LH GH   L  L  LQ  GH+   ++G
Sbjct: 14  GTASIVPADDLRRKLARGVPLNIKLGVDPTSSDLHLGHAVPLRKLRQLQDLGHRVTLIIG 73

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
            GT++IGDPS R+ +R  +   EI  N        +  +          +L N  W+ ++
Sbjct: 74  NGTALIGDPSGRNSTRPQLTPDEIDANAATYVAQATKILDPD----ATEVLYNAAWMLAL 129

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                L E+ S F+V R+L  +    R + +  ++  EF Y I+QAYD V++    +  +
Sbjct: 130 DL-KDLLELASRFTVARILERDDFTRRYESQTPIALHEFLYPIMQAYDSVKI----EADV 184

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSP 254
           ++GG+DQ  N++ G +L E+L      ALT PLL  T    KM K+    I L     +P
Sbjct: 185 EIGGNDQLFNLLAGRELMEKLGMEPQVALTMPLLEGTDGVRKMSKSYGNYIGLT---DAP 241

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVH 311
              +    +I D  +  + +  ++    ++D +         +  E K+ +A EI    H
Sbjct: 242 EEMFGKTMSISDEMIPRYYRLASSRSPEQVDAIEAALADGSAQPYELKRQLAREIADTYH 301

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G    ++A  A    F        +P + +  +    G + L  ++ +AG A S+ EARR
Sbjct: 302 GAGAGDRAQAAFDRVFREGRLPSEVPGVFVDLEPGDDGTVYLAGVLRQAGLAGSSGEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +    +++    ++     +  ++ +      +  GK+     
Sbjct: 362 LIDGGGVRVAGEQLAPGCYNLDPRELEG---AVVQVGKRRFARL 402


>gi|190347206|gb|EDK39441.2| hypothetical protein PGUG_03540 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 604

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 115/463 (24%), Positives = 191/463 (41%), Gaps = 49/463 (10%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRE--LDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
               +  +  L  R  I   ++     L      G +  Y G D +A SLH G+L   M+
Sbjct: 139 SDLSTSLVRHLQSRYLIEGSTHEELFHLSEPGKSGQLKLYCGADPSAKSLHIGNLLPFMV 198

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---- 115
           +   +  G+  + L+GG T  +GDPS R + R  + S E  +N+ +I+     F+     
Sbjct: 199 MLHFRLRGYDVVGLIGGATGAVGDPSGRSKERAQIESDERADNVARIESQIRQFLNNGVE 258

Query: 116 --------YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                   +      +++ NN  W  SI  +D L + G    V  ML+ +S++SRL  + 
Sbjct: 259 YARSRNYPFPGDVGKSVVRNNADWWKSIGMLDFLAKYGRHIRVTNMLARDSIQSRLSSQG 318

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG----------ERLK 217
            L F EF Y +LQAYDF EL K     LQ+GG+DQWGNI  GIDL           +  K
Sbjct: 319 GLGFNEFTYQVLQAYDFWELYKTEGVNLQIGGNDQWGNITAGIDLISRLHKLEPQTKERK 378

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               + +T PLLTT SG K GK+   A++++  +TSPY  +QY+    D  V    K  T
Sbjct: 379 DKNAYGITVPLLTTPSGEKFGKSAGNAVFIDPSITSPYQLYQYFIQTPDEIVGKLLKVFT 438

Query: 278 ---TLPMSEIDRMAKLQGKEINEAKKIIATEITT--MVHGREEAEKAATAAMECFDMSIH 332
                 + E       +      A++++A E+       G  +     T+ +        
Sbjct: 439 LLPLHSVDEHILPDHEKDPGSRIAQRVLAREVVDLVHGVGVGDQMAYITSFLFPTPDQPF 498

Query: 333 SQHMPTISISKDEVSRGM--------------GLLTLIVKAGFATSTNEARRHLKSNAIK 378
              +    + ++    G+               + TL+ K     S  E +  +K+  I 
Sbjct: 499 DDEISAAKLIENFKRSGILVHLDSTQVKFNDLKMSTLLSKV-MNKSKTETKNLIKNGGIY 557

Query: 379 INNSI--ISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHL 416
           +      + +    +   K         + +  GK+N+ +  +
Sbjct: 558 LGLEREQLQDPDDVVLFDKENHLIDNKLLLVRSGKQNYYVVVI 600


>gi|198436589|ref|XP_002122779.1| PREDICTED: similar to GE11414 [Ciona intestinalis]
          Length = 514

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 117/437 (26%), Positives = 188/437 (43%), Gaps = 30/437 (6%)

Query: 6   SDFLSILSERGFIHQISNPRE--LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + L  L ERG +  I  P    L  L        Y G+D TA  LH G+L  +M+L   
Sbjct: 59  KNVLK-LHERGILQDIYPPAAVGLPGLLESKQQCFYCGFDPTADGLHVGNLLSIMVLLHC 117

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------- 114
           Q+ GH  I+++G  T   GDPS   + R M+    IQ+N+  I+   +            
Sbjct: 118 QRAGHNVIAVIGNATVRAGDPSEHTKDRNMLSDNAIQDNVNAIQDCIAKIADTHANYIYD 177

Query: 115 -KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
            K+     D  +L N+TW   +  ID +      F +  M+    ++ R++  + L   E
Sbjct: 178 NKHRKKLPDFKILFNQTWYKELNAIDFISTACRNFRIGPMMEKRYIKDRIQSSEGLMLAE 237

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F Y +LQAYD+  L  NY+C  Q+GG DQ GNI  G  L  +    +++AL +PL+T   
Sbjct: 238 FMYQVLQAYDWQYLHDNYNCTFQVGGVDQLGNINAGQQLIRKTNKGQVYALLTPLVTNLR 297

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-- 291
           G K+GKT   ++WLN   T P+ F+Q++    D+ V +F K  T + +  I+ +      
Sbjct: 298 GQKLGKTAGNSVWLNANKTPPFEFYQFFFKQPDSMVETFLKYFTFIDLKRINEIMIEHTK 357

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISI 341
              +  A++I+A  +  +VHG E  E A       F  S                   +I
Sbjct: 358 HPHLRNAQRILAKHVCKLVHGPEGLESAERCTRALFGGSLEDIEKLSEEEIMTTFNATNI 417

Query: 342 SKDEVSRGMGLLTLIVKAGFAT--STNEARRHLKSNAIKINNSIISNEKLQI-KLQDFDS 398
               +     +  +   A      +  E    +++  ++IN   + +  L +   +    
Sbjct: 418 VTAVLEPDTTVYDVATHAKAIPLGNKGE--NLIRAGGVRINGETVDSPHLILMNGEHVLK 475

Query: 399 TGNIKLSFGKKNHIICH 415
                LS GK NH I  
Sbjct: 476 NDLTVLSVGKTNHFIIK 492


>gi|121593058|ref|YP_984954.1| tyrosyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120605138|gb|ABM40878.1| tyrosyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 410

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 94/426 (22%), Positives = 164/426 (38%), Gaps = 54/426 (12%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EVSLRGVDELLPQEEWTQKLARSEATGQPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDPS R+ +R  + +++I+ N +      +  +          + 
Sbjct: 80  GHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAKTYYTQAAKVLDPA----RTEIR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +     + ++ + ++V RM+       R     S+S  EF Y +LQ YD V 
Sbjct: 136 YNSEWCDQLGA-RGMIQLSAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +         LT PLL       KM K+ +  I
Sbjct: 195 LR----SDLELGGTDQKFNLLMGRHLQQEWGQEPQCVLTMPLLVGLDGVDKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
            + ++  S +       +I D  +  +   L+   + EI  +        N  +AK ++A
Sbjct: 251 GITEDANSMFAKV---LSISDTLMWDWYTLLSFKSLDEIAALKAEVAAGRNPKDAKVMLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    A+ A    +           +P + ++       +G+  L+ +A  A 
Sbjct: 308 KEITARFHSAALADAAEQDFIN-RSKGGIPDDIPEVRLA----GAPLGIGALLKQANLAP 362

Query: 364 STNEARRHL------------KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ST+EA R +                +K+                    G+  +  GK+  
Sbjct: 363 STSEANRLIDGGGVRVDGGVVSDKGLKL------------------EAGSYVVQVGKRKF 404

Query: 412 IICHLC 417
               L 
Sbjct: 405 ARVTLA 410


>gi|302335393|ref|YP_003800600.1| tyrosyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319233|gb|ADK67720.1| tyrosyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 405

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/402 (25%), Positives = 163/402 (40%), Gaps = 21/402 (5%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI    EL     +G  +   +G D T+  LH GH   L  +   Q  GHK   ++G GT
Sbjct: 17  QIVPMDELRHKLEKGVPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDFGHKVTLIIGNGT 76

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  +  ++++ N +         +          +++N  WL  +   
Sbjct: 77  ALIGDPSGRDSTRPPLTEEQVEANAQTYVEQAMKVLDPQ----KTAIVHNGDWLKPLDLA 132

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  +   F+V R+L  E   +R     S+S  EF Y +LQAYD V +       L+MG
Sbjct: 133 KMLELMSR-FNVARILEREDFHNRYTGGLSISLHEFIYPVLQAYDSVVVK----ADLEMG 187

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL   +      ALT PLL       KM K+    + L       Y  
Sbjct: 188 GNDQIFNLLAGRDLMRSMGMEPQVALTVPLLVGLDGHKKMSKSYKNYVGLTDGSNDMY-- 245

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGRE 314
                +I D  V  + +  +TL + EID +         +    K+ +A  I  + HG  
Sbjct: 246 -GKLMSIADEIVPMYFRLCSTLSVDEIDAIDAAYADGSADPYRLKRQLARNIVDLYHGDG 304

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHL 372
             + A  A    F  +     +    +S   V+    + L  L+     A S  EARR +
Sbjct: 305 AGDAAEAAFDAQFKQNKVPDDIAEFPLSVAAVNDEGKVYLAKLLSDVKIAQSAGEARRLI 364

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +K++   +  +   +    F       +  GKK     
Sbjct: 365 DGGGVKVDGVAMERKVYNVDPALFSVG--TVIQSGKKRWARL 404


>gi|90083124|dbj|BAE90644.1| unnamed protein product [Macaca fascicularis]
          Length = 477

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 205/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKNFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-------GIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N   ++                G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSAEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L     E 
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
             A+K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGAQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSELF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N +  + + Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|255022264|ref|ZP_05294257.1| Tyrosyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254968296|gb|EET25865.1| Tyrosyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 411

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/396 (21%), Positives = 155/396 (39%), Gaps = 24/396 (6%)

Query: 23  NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
           N            +   +G D TA  LH GH   L      Q  GH+ + L+G  T+ IG
Sbjct: 26  NEALQRAAQEGRALRVKLGMDPTAPDLHLGHTVLLHKARQFQDLGHQVLFLIGDFTARIG 85

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DP+ +  +R  + ++ +Q N E  +      +          ++ N  WL        L 
Sbjct: 86  DPTGKSSTRPPLSAEAVQANAETYRQQIFRILDPA----RTEVVFNSHWL-DRLRPQELI 140

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           ++ + ++V RML  +    R   +Q ++  EF Y +LQ YD V L       +++GG+DQ
Sbjct: 141 QLAARYTVARMLERDDFSKRYHAQQPIAVHEFLYPLLQGYDSVALR----ADVELGGTDQ 196

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G +L +         LT P+L       KM K+L   I L     +P   +   
Sbjct: 197 RFNLLVGRELQKEYGQRPQVVLTMPILEGLDGVQKMSKSLGNTIALE---DTPEEMFGKL 253

Query: 262 RNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            +I D  +  +   L+     E     + A+       + K  +A E+ T  HG     +
Sbjct: 254 MSISDTLMWRYYALLSAKSQPEQVALRQKAEAGEINPRDCKLDLAQELVTRFHGSSAGVR 313

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A    +  F        +   ++    +   + L   +   G+  S++E  R ++  A+ 
Sbjct: 314 ARETFLAQFQRRERPDDLALQTL---RLPPPLTLAKTLQALGWVRSSSEGMRKIREGAVH 370

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +  + I +  L ++           L FGK++    
Sbjct: 371 LGETRIEDPSLALEP-----GPEYFLQFGKRHVARV 401


>gi|254414535|ref|ZP_05028301.1| tyrosyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196178765|gb|EDX73763.1| tyrosyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 390

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 93/391 (23%), Positives = 167/391 (42%), Gaps = 34/391 (8%)

Query: 23  NPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L+     ++  +   +G D T + +H GH   +  L   Q  GH  + ++G  T+ 
Sbjct: 25  PSENLEQRIRQTERPLRIKLGIDPTGTDIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTAR 84

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDPS + E R+ +  +++Q+N +         + + T      +  N  WL  +   ++
Sbjct: 85  IGDPSGKSEVRKHLSDEQVQQNAQTYLDQVRPILDFETP-GRLEIRYNSEWLSKLDLAEI 143

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  + +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +       +++GG+
Sbjct: 144 LDLLATM-TVGQMLAKEGFAERFKQENPIYLHEFLYPLMQGYDSVAVK----ADVELGGT 198

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL      P  F L  P+L  T    KM K+L+  + L +     Y   Q
Sbjct: 199 DQKFNIAVGRDLQRHFGQPPQFGLLLPILIGTDGVLKMSKSLNNYVGLREAAQPMY---Q 255

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 D  +  + + LT L ++E+            + ++++A  I T  HG++EA++A
Sbjct: 256 KLEGTKDNLLEEYFELLTDLSLAEL-------PVNPRDRQQLLAWTIVTQYHGQKEADEA 308

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                           +P  S+S  +V     L  ++  +G  +S+ E RR +K   +K+
Sbjct: 309 K-----------GGGAIPEFSLS--QVEFPAKLFYILNASGLCSSSGEGRRQIKGGGVKL 355

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
               I++        +        L  GKK 
Sbjct: 356 EGDRITDVDCTFDSPEALEGK--VLQVGKKK 384


>gi|284928651|ref|YP_003421173.1| tyrosyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809110|gb|ADB94815.1| tyrosyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 403

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 19/384 (4%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S   +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R
Sbjct: 35  SDRPLRVKLGIDPTGSDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + + S+++++N+E      SS + + T      +  N  W   + +   ++E+ S  +V+
Sbjct: 95  KQLNSKQVEKNVESYLEQLSSVLDFSTP-GRLEIRYNSEWFNKLDFHK-VQELLSTMTVS 152

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +ML+ E    R K+E  +   EF Y ++Q YD V +    +  +++GG+DQ  NI  G D
Sbjct: 153 QMLAKEGFSERYKKENPIFLHEFLYPLMQGYDSVVV----NADVELGGTDQKFNIAVGRD 208

Query: 212 LGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L         F L  P+LT T    KM K+L   I L ++  S Y+       I D  V 
Sbjct: 209 LQRHFGQKPQFGLLLPILTGTDGTQKMSKSLGNYIGLKEDALSMYS---KIEKIPDTLVQ 265

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           ++ + LT L ++E+ + +        E +K++ATEIT+  HG E+A  A   A       
Sbjct: 266 NYFELLTNLDLNELPKDS-------RELQKLLATEITSHYHGEEKALSAKKTAENLVKNR 318

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                      +   V     L  ++  +    S+ E RR ++  ++++    I +  L 
Sbjct: 319 NSLLTDTITEFNLSNVVFPAKLFYILSASKLCVSSGEGRRQIQGGSVRLEGEKILDVNLV 378

Query: 391 IKLQDFDSTGNIKLSFGKKNHIIC 414
               +        L  GK      
Sbjct: 379 FDNPEQLDNK--VLQVGKTKFTRL 400


>gi|31789364|gb|AAP58481.1| putative tyrosyl-tRNA synthetase [uncultured Acidobacteria
           bacterium]
          Length = 402

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 173/410 (42%), Gaps = 31/410 (7%)

Query: 15  RGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +G +  +        L     +   +   +G+D TA  LH GH+  +  +   Q  GH  
Sbjct: 12  KGCVDVVRPGELRAKLELSQKTGRPLVVKVGFDPTAPDLHLGHVVLIRKMKHFQDLGHTV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I ++G  T++IGDP+ R ++R  +  +EI +N E  K      +     +   ++  N  
Sbjct: 72  IYVVGAFTALIGDPTGRSKTRPPLTQEEIAQNAETYKTQIFKILD----REKTVVRFNSE 127

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +     ++ + + ++V +M+     ++R +  + ++  EF Y + QAYD V L   
Sbjct: 128 WLEPLGSFGWVK-LAARYNVAQMMERREFKARYESGKPIAVHEFLYPLAQAYDSVFLH-- 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N+  G D+           +T+PLL       KM K+L   I + +
Sbjct: 185 --ADVELGGTDQLWNLNVGRDIMPSFGLEPQIVMTTPLLEGLDGTEKMSKSLGNYIGVTE 242

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEI 306
           E +  +       +I D  +  +   LT L  +E   +    +       +AK  +AT I
Sbjct: 243 EASEMF---GKLMSISDDLMWRYYLLLTDLTPAEVLGVRTRVESGTLHPKQAKVDLATRI 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  HG E A +AA      F          TI +  ++ +    L   +V+ G A ST+
Sbjct: 300 VTDFHGGETAARAADQFERRFTKKELPVDAATIELGDEDWNA--SLEKRLVRCGLAESTS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +ARR ++   ++I+            +      G+  L  GK  H    +
Sbjct: 358 DARRKIQQGGVRIDGQKAE-------VGSSAPAGDYLLQAGK--HAAVKV 398


>gi|294660357|ref|NP_853071.2| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286870|sp|Q7NBH9|SYY_MYCGA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|284812014|gb|AAP56639.2| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930549|gb|ADC30488.1| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 415

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 122/426 (28%), Positives = 213/426 (50%), Gaps = 26/426 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+S L +R  I QISN  +L +         Y+G+D +  SLH G+L  +++L +L+K 
Sbjct: 2   DFISELKKRNIIKQISNEEKLALALKNQK-GVYVGFDPSGESLHLGNLIPIIVLRYLKKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPS +   R++   ++I  N  KIK     +       T A ++
Sbjct: 61  GFKTYAILGGATGLIGDPSGKTSERKVQDYEKITANANKIKVQLERY-------TQAKII 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  +  ++  ++ LR+ G   ++  +L  E +RSR+  E  +S+ EF+Y I+Q +DF+ 
Sbjct: 114 NNIDFYQNMNLLNFLRDTGKLINIGYLLDKEFIRSRI--ENGISYAEFSYNIIQGHDFLH 171

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL----FALTSPLLTTASGTKMGKTLS 242
           L + YD ++Q GGSDQWGNI  GID+ +R    +       LT  LL   +G K GK+  
Sbjct: 172 LYEQYDVQVQCGGSDQWGNITTGIDMIKRKYGEEKTPYLCGLTFNLLLNPNGNKFGKSEQ 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVS-FAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
           GA++L++ +T PY  WQY  N DD  ++    + +    + ++  + +     K+   A+
Sbjct: 232 GALYLDENLTHPYLIWQYIYNQDDQFIIDLIHRYVLDQSLEQLQELIEAHLANKKTRIAQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-----ISISKDEVSRGMG--L 352
           K +A  +   +H +E  +         FD  +             S  K E+ R     +
Sbjct: 292 KFLADYLVKFIHSQEHLDTVHKMNKALFDNQLDQLSDQEKLVVFASFDKVELDRNQSFMV 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +++A  A S    R  +   +I+I++  I++ + Q+ ++         +  GKKN+ 
Sbjct: 352 IDFLLQAKVADSKRILRELIAQGSIQIDDLKITDPQAQLNVR--KDQQLTVIKKGKKNYF 409

Query: 413 ICHLCG 418
           I    G
Sbjct: 410 IVVWKG 415


>gi|124026461|ref|YP_001015576.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961529|gb|ABM76312.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 415

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 167/405 (41%), Gaps = 31/405 (7%)

Query: 22  SNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           S+   L  L      +  +   +G D T + +H GH      L   Q  GH  I ++G  
Sbjct: 28  SDQSFLKRLELSSVDKNPLRVKLGIDPTGTDIHIGHSILFRKLRAFQDAGHTAILIIGDF 87

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG------KTDALMLNNETW 131
           T+ IGDP+ + ++R  +   E++ N            +           +   +  N  W
Sbjct: 88  TARIGDPTGKSKTRIQLSKDEVEANALNYLEQLGLGKEPKDSLLDFSTPSRIEIRRNSEW 147

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++    ++  + +  +V +ML+ E   +R K    +S  EF Y +LQ YD V +    
Sbjct: 148 LENLNLSKVIELLSN-STVGQMLAKEDFSNRYKSGTPISLHEFLYPLLQGYDSVAI---- 202

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK-MGKTLSGAIWLNKE 250
           +  +++GG+DQ  NI  G DL         F +  P+L    GT+ M K+L   + +N++
Sbjct: 203 NSDVELGGTDQKFNIAMGRDLQRAFGQKPQFGMLLPILVGLDGTRKMSKSLDNIVGINED 262

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S Y+       + D  V+++   LT   + E+            E +K +A +IT+  
Sbjct: 263 SLSMYS---KLEKVPDDLVLTYLNLLTNENLKEL-------SSNPREVQKFMALKITSNF 312

Query: 311 HGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            G E A+ A   + +         + +P  S+S   V+       L  K    +S++EAR
Sbjct: 313 KGIEAAKNAQFNSEKLVLGTKDSLEEIPEASVS--NVNFPAKAFYLFSKMEMCSSSSEAR 370

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           R +    ++I+   I +  L+    D        L  GKK  +  
Sbjct: 371 RQILGGGVRIDGEKIMDPNLEFHTPDDLIGK--ILQVGKKKFLRV 413


>gi|72382739|ref|YP_292094.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|115305816|sp|Q46JD7|SYY_PROMT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72002589|gb|AAZ58391.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 415

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 165/405 (40%), Gaps = 31/405 (7%)

Query: 22  SNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           S+   L  L      +  +   +G D T + +H GH      L   Q  GH  I ++G  
Sbjct: 28  SDQSFLKRLELSSVDKKPLRVKLGIDPTGTDIHIGHSILFRKLRAFQDAGHTAILIIGDF 87

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG------KTDALMLNNETW 131
           T+ IGDP+ + ++R  +   E+Q N                        +   +  N  W
Sbjct: 88  TARIGDPTGKSKTRIQLSKDEVQSNALNYLEQLGLGKDPKDSLLDFSIPSRIEIRRNSEW 147

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++    ++  + +  +V +ML+ E   +R K    +S  EF Y +LQ YD V +    
Sbjct: 148 LENLNLSKVIELLSN-STVGQMLAKEDFSNRYKSGTPISLHEFLYPLLQGYDSVAI---- 202

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  NI  G DL +       F +  P+L       KM K+L   + +N++
Sbjct: 203 NSDVELGGTDQKFNIAMGRDLQKAFGQKPQFGMLLPILVGLDGARKMSKSLDNIVGINED 262

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S Y+       + D  V+++   LT   + E+            E +K +A ++T+  
Sbjct: 263 SLSMYS---KLEKVPDDLVLTYLNLLTNENLKEL-------SSNPREVQKFMALKVTSNF 312

Query: 311 HGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            G E A+ A   + +         + +P  S+S   V+       L  K    +S++EAR
Sbjct: 313 KGIEAAKNAQFNSEKLVLGTKDSLEEIPEASVS--NVNFPAKAFYLFSKMEMCSSSSEAR 370

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           R +    ++I+   I +  L+    D        L  GKK  +  
Sbjct: 371 RQILGGGVRIDGKKIMDPNLEFHTPDDLIGK--ILQVGKKKFLRV 413


>gi|321309531|ref|YP_004191860.1| tyrosyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801375|emb|CBY92021.1| tyrosyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 412

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 123/414 (29%), Positives = 212/414 (51%), Gaps = 19/414 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL  L +RG +  I++  +            Y+G D TA SLH G+   L LL    + G
Sbjct: 7   FLRELKDRGLVDNITDEGKFVSALESKR-GVYLGIDPTAPSLHLGNYLGLTLLRRFIQRG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK + ++GG T+ +GDPSFR + R+ M  ++I+ N E+I+      +       +A +++
Sbjct: 66  HKVVVILGGMTASVGDPSFRSKERKKMSLEDIELNKERIRDEVKRVLP------EANIVD 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N ++   ++  D +RE+ S  +++ +LS E ++ RL   + L+  EF Y + Q++DF EL
Sbjct: 120 NLSFYSDLQISDFIREMCSQVNISTLLSKEFLKDRL--SRGLTLAEFVYPLFQSWDFYEL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
            K  D R+Q+GGSDQWGNI  GIDL ++  +P  +   LT PLL  +SG K GK+ + A+
Sbjct: 178 YKGKDIRVQLGGSDQWGNITSGIDLIKKTVSPDHEAVGLTFPLLLDSSGKKFGKSENNAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L++ +TSPY  +QY  N+DD  +  + ++LT + +SEI+ +      +    K  +  E
Sbjct: 238 FLDQNLTSPYVVFQYLINLDDKLIPDYLRKLTFINLSEIESLVSTSSPQN--LKFTLIWE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQH-----MPTISISKDEVSRGMGLLTLIVKAG 360
           I   ++  +  EK    +   F             +   SI        + L   +   G
Sbjct: 296 IFKHIYDHDTFEKIKRVSGVLFGKGSEDLKSGDLLLVEGSIPTVYYKESVNLSIALKDLG 355

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F++S +E +R + SN+I + N  +++    +        G + L  GKK+  + 
Sbjct: 356 FSSSNSETKRLVSSNSIFLFNKCLTDWNTTLDES-ISKDGYLILRKGKKSFGLV 408


>gi|89896576|ref|YP_520063.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89336024|dbj|BAE85619.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 410

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 29/405 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N  EL    ++       +   +G D +A  +H GH   L  +  +Q  GH+ + 
Sbjct: 15  VSMLVNAEELKNKLAESHKNRRPLVIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDPS + + R  +  ++++EN           +     K    +  N  WL
Sbjct: 75  VIGDFTGKIGDPSGKAKGRTALSDEQVKENARTYFEQIFKVLD----KEKTTVRYNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + + ++ +  +V RML  +  + R      +   EF Y ++QAYD V L     
Sbjct: 131 SKLNF-EDVLKLAATTTVARMLERDDFQKRFGSNIPIGIHEFFYPLMQAYDSVTLK---- 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI+ G  L + +  P+  A+  PLL       KM K+L   I + +  
Sbjct: 186 ADIELGGTDQTFNILMGRTLQKAMGQPQQIAMFMPLLEGLDGVEKMSKSLGNYIGVYEPA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTM 309
              +   +    + D  ++ + +  T      I+  R+   QGK   + K  +A  IT +
Sbjct: 246 PVMF---KKVMEVSDPLILKYFELATDEHPDRIEAFRLELAQGKNPRDVKYALAEIITRL 302

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  ++   A       F        +P + +     SR M L+ L+V++GF  S  E R
Sbjct: 303 YHTEQDVMTAKAYYEAAFSKKTIPAQIPVLPVKAR--SRLMELVPLLVQSGFTASNGEFR 360

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           R ++   +++N   IS+    +   D        L  GKK  +  
Sbjct: 361 RLVQQGGVQLNQQKISDLDRVLADGD-------VLKIGKKCFVKV 398


>gi|321263242|ref|XP_003196339.1| tyrosine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462815|gb|ADV24552.1| tyrosine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 478

 Score =  267 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 146/455 (32%), Positives = 225/455 (49%), Gaps = 46/455 (10%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K+  L  L ERGF+  I++  +L    +    T Y G D +ASSLH G+L  L+ L   Q
Sbjct: 26  KTTVLQELDERGFVAAITS-DKLKQHVTS-PTTIYAGVDPSASSLHVGNLLPLLGLLHFQ 83

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH+ I L+GG T  IGDPS R   R+ +   E++ NI  I      F   G       
Sbjct: 84  AHGHQSICLIGGATGSIGDPSGRSTERKSLTPSELRLNIAGITSQVHRFFIRGQEYLSKR 143

Query: 119 ----------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
                     G     ++NN  W+  +  +D LR  G    V+ MLS +SV++RL  +  
Sbjct: 144 GVDLAAMRKDGGRGVKVMNNYEWMRDVSLLDFLRTTGKMARVSTMLSRDSVKNRLNSDSG 203

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-------- 220
           +S+ EF Y +LQAYDF  L   + C +Q+GGSDQWGNI+ GIDL  R K  +        
Sbjct: 204 ISYTEFTYQLLQAYDFSHLHSEHGCNIQLGGSDQWGNIVAGIDLIRRGKIAEREEKGEQV 263

Query: 221 ------LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                 ++ LT PLLTT++G K GK+   A+WL+ + TS   F+Q++    D DV  + K
Sbjct: 264 KDEEGDVYGLTIPLLTTSTGEKFGKSAGNAVWLDDKRTSAAEFYQFFLRTTDEDVEKYLK 323

Query: 275 RLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI- 331
             T LP+S I  + +           +K++A E+T +VHG     +A TAA   +  SI 
Sbjct: 324 LFTFLPLSRIQDVMQAHQTSKTERLPQKLLAAEVTELVHGPAALSRALTAAQVLYSTSIS 383

Query: 332 ----------HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                         M    + K++++  MG+  + V  G   S  E++R ++S+A+++N+
Sbjct: 384 SLTAEKVLDAFRGDMRFHRVKKEDLAE-MGVGKVTVTYGLCGSVGESQRLVQSSALQVND 442

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             I + + +I ++D        +  G K  II ++
Sbjct: 443 RKIGDHREKIVVEDLVDGHIAIVRAGNKRQIILYV 477


>gi|118382836|ref|XP_001024574.1| tyrosyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89306341|gb|EAS04329.1| tyrosyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 500

 Score =  267 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 120/462 (25%), Positives = 210/462 (45%), Gaps = 55/462 (11%)

Query: 10  SILSERGFIHQISNP-----------------RELDILCSQGVVTAYIGYDLTASSLHAG 52
             L  R  + Q +N                  +    + +Q   +AY G+D TA SLH G
Sbjct: 38  KELQNRELLFQCTNDILTKDTFYQHLIQQYNAQGDKQVNNQKQFSAYAGFDPTADSLHMG 97

Query: 53  HLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS 112
           +L  ++ +  L   G KPI L+GG T +IGDPS + + R M+  +E+  N++ I+     
Sbjct: 98  NLISILTMIRLSLLGIKPILLVGGATGLIGDPSGKTQERNMLTKEEVLSNVQGIENTLRK 157

Query: 113 ----------------FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                            I Y   K D  ++NN  +   +  +D +R+IG  F +  +L+ 
Sbjct: 158 CTSNIYSFLEKNKQKLEIDYIPAKEDLQIINNYDFYKDMNILDFIRDIGKHFRMGNLLNK 217

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E++ +RL  E  LS+ EF Y +LQ YDF +L  + +C +Q+GGSDQWGNI  GI+L  R 
Sbjct: 218 ETIANRLNTEDGLSYTEFTYTLLQGYDFEKLFLDKNCIIQVGGSDQWGNITSGIELIRRK 277

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              +++ +T+ L+ TA G K GK+   A+WL+   T  Y+ +QY  N+ D   +++ K  
Sbjct: 278 HRAEVYGITTNLVLTAQGKKFGKSEGNALWLDPAKTKSYDIFQYLINVPDQLSINYLKMF 337

Query: 277 TTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVH------GREEAEKAATAAMECFD 328
           + LP+ +I+ + K   ++     A+  +A +I  MV        +     A       F 
Sbjct: 338 SFLPLHQIEEIEKKHMEDAGKRLAQNTLAEQIIGMVQGDSQSAEQGAQTTAQKFFTTDFS 397

Query: 329 MSIHSQHMPTIS----------ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
                     I           + + ++ +    + +I       +  E +R++++    
Sbjct: 398 KFNEKSESEIIEFFSSFNEKHTVERKDLQKYKNYIDMIGDLKLLKNKAEIKRNIENGGAY 457

Query: 379 INNSII----SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           INN  I    S+    +  ++  +   +   FGKKN+ +  +
Sbjct: 458 INNKRISLVDSDNLQTLLSENLLANRFLVARFGKKNYYLIEV 499


>gi|206602818|gb|EDZ39299.1| Tyrosyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 403

 Score =  267 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 174/409 (42%), Gaps = 32/409 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           + +RG +           L         +    G+D T+  LH GH   L  L   Q  G
Sbjct: 16  ILKRGIVDLYVEEDFQKKLEKSYKTRIPLKVKAGFDPTSPDLHLGHFVLLKKLRQFQDMG 75

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H    ++G  T+ IGDP+ R E R+ +  ++I EN +  +      +K    +    ++ 
Sbjct: 76  HLVQFVVGDFTAFIGDPTGRSEIRKPISPEQIAENAKTYERQVFRVLK----QEKTQVVF 131

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  +   D L  +    +V R L  +  + R+     +   E  Y ++Q YD V L
Sbjct: 132 NSSWMKKLGV-DGLVRLAGLQTVARFLERDDFQKRMNERLPIHLHELLYPLMQGYDSVVL 190

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  +++GGSDQ  N++ G DL  + +      LT PLL       KM K+L  A+ 
Sbjct: 191 ----ESDVELGGSDQLFNLLVGRDLLRQHQKEPQAVLTLPLLVGLDGEKKMSKSLRNAVA 246

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L     SP   +    +I D+ + S+   LT L      ++         +AK  +A  +
Sbjct: 247 LE---DSPDEMFGRLMSIPDSLIASYTTLLTDLDPDANSQL------HPRDAKVYMARSV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  HG + A +A  +  + F      + +P   + + E    + L T++V++G A S +
Sbjct: 298 VSQFHGEDNANRAIASFEKVFSRKELPEEIPVFHVREGER---VRLSTVMVQSGAAKSES 354

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +A++ ++  A+  N   + +  + I+ ++        L  GK+ +    
Sbjct: 355 QAKQLIRQGAVDWNGETVQDPFMMIEPKND------LLKVGKRFYCRVQ 397


>gi|282897374|ref|ZP_06305376.1| Tyrosyl-tRNA synthetase, class Ib [Raphidiopsis brookii D9]
 gi|281198026|gb|EFA72920.1| Tyrosyl-tRNA synthetase, class Ib [Raphidiopsis brookii D9]
          Length = 398

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 87/396 (21%), Positives = 162/396 (40%), Gaps = 26/396 (6%)

Query: 22  SNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           S    L+     +   +   +G D T + +H GH   +  L   Q  GH  + ++G  T+
Sbjct: 24  SETESLEKRLLNADHPLRIKLGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTA 83

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ + + RR +  +++ +N +         + + T     +  N   WL  +    
Sbjct: 84  RIGDPTGKSDVRRQLTEEDVSQNAQTYLEQVRPILDFDTPGRLEVHYN-SQWLSGLDLAK 142

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  + +  +V +ML+ E    R K+E  +   EF Y ++Q +D V +       +++GG
Sbjct: 143 ILELLSTM-TVGQMLAKEGFAERYKKENPIFLHEFLYPLMQGFDSVAIR----SDVELGG 197

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  NI  G DL         F L  P+L  T    KM K+L   + L++    P   +
Sbjct: 198 TDQKFNIAVGRDLQRHFGLRPQFGLLLPILIGTDGIQKMSKSLGNYVGLSEH---PSQKY 254

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           Q  + + D  +  + +          D           + ++ +A EI    HG  +A +
Sbjct: 255 QKLQGVPDHLLTQYFEL-------LTDLPLDTLPDNPRDRQQFLAWEIVRQYHGEIQANQ 307

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A  AA       +    +P  S++ +       L  ++  +G   ST E +R ++   ++
Sbjct: 308 AQEAAKSKGKEGV----LPEFSLA-NITQFPTKLAHILSASGLCKSTGEGKRKIQEGGVR 362

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++   I++  L        S     L  GKKN +  
Sbjct: 363 LDGEKIADMDLTFFGPGDLSGK--VLQVGKKNFVRI 396


>gi|222109827|ref|YP_002552091.1| tyrosyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221729271|gb|ACM32091.1| tyrosyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 410

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 95/426 (22%), Positives = 164/426 (38%), Gaps = 54/426 (12%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EVSLRGVDELLPQEEWTQKLARSEATGQPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDPS R+ +R  + +++I+ N E      +  +          + 
Sbjct: 80  GHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAETYYTQAAKVLDPA----RTEIR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +     + ++ + ++V RM+       R     S+S  EF Y +LQ YD V 
Sbjct: 136 YNSEWCDQLGA-RGMIQLSAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +         LT PLL       KM K+ +  I
Sbjct: 195 LR----SDLELGGTDQKFNLLMGRHLQQEWGQEPQCVLTMPLLVGLDGVDKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
            + ++  S +       +I D  +  +   L+   + EI  +        N  +AK ++A
Sbjct: 251 GITEDANSMFAKV---LSISDTLMWDWYTLLSFKSLGEIAALKAEVAAGRNPKDAKVMLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    A+ A    +           +P + ++       +G+  L+ +A  A 
Sbjct: 308 KEITARFHSAALADAAEQDFVN-RSKGGIPDDIPEVRLA----GAPLGIGALLKQANLAP 362

Query: 364 STNEARRHL------------KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ST+EA R +                +K+                    G+  +  GK+  
Sbjct: 363 STSEANRLIDGGGVRVDGVVVSDKGLKL------------------EAGSYVVQVGKRKF 404

Query: 412 IICHLC 417
               L 
Sbjct: 405 ARVTLA 410


>gi|124514296|gb|EAY55810.1| Tyrosyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 403

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 171/408 (41%), Gaps = 32/408 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           + +RG +           L         +    G+D T+  LH GH   L  L   Q  G
Sbjct: 16  ILKRGIVDLYVEEDFEKKLEKSYKTGIPLKVKAGFDPTSPDLHLGHFVLLKKLRQFQDMG 75

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H    ++G  T+ IGDP+ R E R+ +  ++I EN +  +      +K    +    ++ 
Sbjct: 76  HLVQFVVGDFTAFIGDPTGRSEIRKPISPEQIAENAKTYERQVFRVLK----QERTQVVF 131

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  +   D L  +    +V R L  +  + R+     +   E  Y ++Q YD V L
Sbjct: 132 NSSWMKKLGV-DGLVRLAGLQTVARFLERDDFQKRMNERLPIHLHELLYPLMQGYDSVVL 190

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
               +  +++GGSDQ  N++ G DL  + +      LT PLL       KM K+L  A+ 
Sbjct: 191 ----ESDVELGGSDQLFNLLVGRDLLRQHQKEPQVVLTLPLLVGLDGEKKMSKSLRNAVA 246

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L     SP   +    +I D+ + S+   LT L      ++         +AK  +A  +
Sbjct: 247 LE---DSPDEMFGRLMSIPDSLIASYTTLLTDLDPDANIQL------HPRDAKIQMARSV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               HG + + KA  +  + F      + +P   + +      + L T++V++G A S +
Sbjct: 298 VAQFHGEDNSNKAVESFEKVFSRKEIPEEIPVFHVKE---GGSVRLSTVMVQSGAAKSES 354

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +A++ ++  A+  N   + +    ++ ++        L  GK+ +   
Sbjct: 355 QAKQLIRQGAVDWNGETVQDPFKSVEPKND------LLKVGKRFYCRV 396


>gi|146416377|ref|XP_001484158.1| hypothetical protein PGUG_03540 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 604

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 115/463 (24%), Positives = 191/463 (41%), Gaps = 49/463 (10%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRE--LDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
               +  +  L  R  I   ++     L      G +  Y G D +A SLH G+L   M+
Sbjct: 139 SDLLTSLVRHLQSRYLIEGSTHEELFHLSEPGKSGQLKLYCGADPSAKSLHIGNLLPFMV 198

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---- 115
           +   +  G+  + L+GG T  +GDPS R + R  + S E  +N+ +I+     F+     
Sbjct: 199 MLHFRLRGYDVVGLIGGATGAVGDPSGRSKERAQIESDERADNVARIELQIRQFLNNGVE 258

Query: 116 --------YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                   +      +++ NN  W  SI  +D L + G    V  ML+ +S++SRL  + 
Sbjct: 259 YARSRNYPFPGDVGKSVVRNNADWWKSIGMLDFLAKYGRHIRVTNMLARDSIQSRLSSQG 318

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG----------ERLK 217
            L F EF Y +LQAYDF EL K     LQ+GG+DQWGNI  GIDL           +  K
Sbjct: 319 GLGFNEFTYQVLQAYDFWELYKTEGVNLQIGGNDQWGNITAGIDLISRLHKLEPQTKERK 378

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               + +T PLLTT SG K GK+   A++++  +TSPY  +QY+    D  V    K  T
Sbjct: 379 DKNAYGITVPLLTTPSGEKFGKSAGNAVFIDPSITSPYQLYQYFIQTPDEIVGKLLKVFT 438

Query: 278 ---TLPMSEIDRMAKLQGKEINEAKKIIATEITT--MVHGREEAEKAATAAMECFDMSIH 332
                 + E       +      A++++A E+       G  +     T+ +        
Sbjct: 439 LLPLHSVDEHILPDHEKDPGSRIAQRVLAREVVDLVHGVGVGDQMAYITSFLFPTPDQPF 498

Query: 333 SQHMPTISISKDEVSRGM--------------GLLTLIVKAGFATSTNEARRHLKSNAIK 378
              +    + ++    G+               + TL+ K     S  E +  +K+  I 
Sbjct: 499 DDEISAAKLIENFKRSGILVHLDSTQVKFNDLKMSTLLSKV-MNKSKTETKNLIKNGGIY 557

Query: 379 INNSI--ISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHL 416
           +      + +    +   K         + +  GK+N+ +  +
Sbjct: 558 LGLEREQLQDPDDVVLFDKENHLIDNKLLLVRSGKQNYYVVVI 600


>gi|282901396|ref|ZP_06309321.1| Tyrosyl-tRNA synthetase, class Ib [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193675|gb|EFA68647.1| Tyrosyl-tRNA synthetase, class Ib [Cylindrospermopsis raciborskii
           CS-505]
          Length = 398

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 87/396 (21%), Positives = 163/396 (41%), Gaps = 26/396 (6%)

Query: 22  SNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           S    L+     +   +   +G D T + +H GH   +  L   Q  GH  + ++G  T+
Sbjct: 24  SETESLEKRLLNADHPLRIKLGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTA 83

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ + + RR +  +++ +N +         + + T     +  N   WL  +    
Sbjct: 84  RIGDPTGKSDVRRQLTEEDVSQNAQTYLEQVRPILDFDTPGRLEVHYN-SQWLSGLDLAK 142

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  + +  +V +ML+ E    R K+E  +   EF Y ++Q +D V +       +++GG
Sbjct: 143 ILELLSTM-TVGQMLAKEGFAERYKKENPIFLHEFLYPLMQGFDSVAIK----SDVELGG 197

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  NI  G DL         F L  P+L  T    KM K+L   + L++    P   +
Sbjct: 198 TDQKFNIAVGRDLQRHFGLRPQFGLLLPILIGTDGIQKMSKSLGNYVGLSEH---PSQKY 254

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           Q  + + D  +  + +          D           + ++ +A EI    HG  +A +
Sbjct: 255 QKLQGVPDHLLTQYFEL-------LTDLPLDTLPDNPRDRQQFLAWEIVRQYHGEIQANQ 307

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A  AA       +    +P  S++ +       L  ++  +G   ST E +R ++   ++
Sbjct: 308 AQEAAKSKGKEGV----LPEFSLA-NITQFPAKLAHILSASGLCKSTGEGKRKIQEGGVR 362

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +++  I++  L        S     L  GKKN +  
Sbjct: 363 LDSEKITDVDLTFFGPGDLSGK--VLQVGKKNFVRI 396


>gi|257460766|ref|ZP_05625867.1| tyrosyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442097|gb|EEV17239.1| tyrosyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 401

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 177/426 (41%), Gaps = 43/426 (10%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M  FK         RG + +I    +++ L      S  V    +G D TA+ LH GH  
Sbjct: 8   MENFK---------RG-VAEIIGEEQIEALIRRYYDSGEVFYVKVGMDPTAADLHLGHAV 57

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  L +LQ  G     L+G  T+ IGDP+ + E+R+ +  + + +N +  +      + 
Sbjct: 58  VLNKLAFLQNHGAIVQFLIGDFTAQIGDPTGKSETRKKLAREIVLQNAKTYEQQVFKILN 117

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    ++ N  W  +      + E+ S F+V RML  +    R K EQ +S  EF 
Sbjct: 118 PA----KTKVMFNSEWT-NRLGASGMIELSSTFNVARMLERDDFEKRYKAEQPISISEFM 172

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLL-TTAS 233
           Y +LQ YD V +     C ++ GG+DQ  N++ G  L        +   +  PLL  T  
Sbjct: 173 YPLLQGYDSVCMK----CDIEFGGTDQKFNLLMGRQLQRIYDIGKEQSVVMMPLLVGTDG 228

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-- 291
             KM K+L   I +     +P++ +    +I DA +  +   L+     +I+ +      
Sbjct: 229 TNKMSKSLGNYIGVT---DTPHDMYGKVMSISDALMWDWYNLLSQKSSEDIELIKGFVAD 285

Query: 292 -GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                   K+ +A+EI T  +    A +A                +    +S        
Sbjct: 286 GSIHPKAVKEELASEIVTQFYDENTAFEAKQEFDRVHGAGELPSEIKEYHVSS-----PA 340

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++  ++    A S+++ARR +KSNA+ I+ + I +E+LQ+        G   L  GKK 
Sbjct: 341 WIVKALISCKLAVSSSDARRLIKSNAVSIDQNKILDEQLQLSS------GEYTLQVGKKK 394

Query: 411 HIICHL 416
                +
Sbjct: 395 FAKLKV 400


>gi|315638888|ref|ZP_07894060.1| tyrosine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481106|gb|EFU71738.1| tyrosine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 402

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 180/422 (42%), Gaps = 35/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   +I +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKEILAEVKRGC-AEIIDEARIEDLIKNYYEKGENFYVKAGFDPTAPDLHLGHSVVLSK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G +   L+G  T  IGDPS ++ +R+ +  +E+ +N +  +      +     
Sbjct: 61  MAFLQKHGARVQFLIGDFTGQIGDPSGKNATRKKLSQEEVLKNAKTYESQVFKILD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  WL  +     + E+ S FSV RML  E    R + + S+S  EF Y +L
Sbjct: 117 KNKTDIVFNSKWLNELGA-AGIVELTSTFSVARMLEREDFTKRFREQSSISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRTLQRIYDVKKEQAIIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKE 294
            K+L+  I + +      + +    +I D  +  + + L+   + EI+      +     
Sbjct: 232 SKSLNNYIGVTEN---AKDIYAKILSISDELMFRYYELLSKKSLKEIETIKENIQNGSLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
               K+ +A E+    H +E A +A          +     +    +S       + L  
Sbjct: 289 PKIVKENLALELVERFHSKELANEAKAEFDRVHSANALPSEIAEFELS----GGSVWLAK 344

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G   ST+ ARR + +N++ +N+  I +E++Q++L      G   L  GK+     
Sbjct: 345 ALVECGLENSTSAARRAIVANSVSVNSQKIKDEQMQLEL------GEYILQIGKRKFARL 398

Query: 415 HL 416
            +
Sbjct: 399 KV 400


>gi|296122444|ref|YP_003630222.1| tyrosyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296014784|gb|ADG68023.1| tyrosyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 414

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 88/412 (21%), Positives = 174/412 (42%), Gaps = 31/412 (7%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG + ++    EL    ++       +    G D T   +H GH   L  L   Q+ GH+
Sbjct: 22  RG-VEKVVPEEELARKLAKSRETGRPLRIKYGIDPTGIDVHLGHTVPLRKLRQFQELGHQ 80

Query: 70  PISLMGGGTSIIGDPSFRDESR-RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            + ++G  T+++GDPS RD++R + + ++E++ N           I      +   +  N
Sbjct: 81  AVLIIGNFTAMVGDPSGRDQARAKRLSAEEVEANATDYLKQVGKVIDL----SKTEIHRN 136

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   + + D+L  + S  +V ++L+ +    R   +  +   E  Y ++QA+D VE+ 
Sbjct: 137 GEWFSKMTFADILT-LCSKVTVAQLLTRDDFAKRYASQSPIFLHECLYPVMQAWDSVEIK 195

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 +++GG++Q  + +   DL    +  +   + SP+L       +MGK+L   I +
Sbjct: 196 ----SDIELGGTEQLYSFMLARDLQRDQQLEQQLGVMSPILVGLDGKRRMGKSLGNYIGI 251

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            +   SP    + +  I D  +  + + LT +P+ E+ ++          AK+ +A E+ 
Sbjct: 252 AE---SPLAMMKKFMQIPDEVMPMYFELLTNIPLDEVQQLLAGHP---KLAKQRLAREVI 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
              H     ++A                +  ++I    VS G +    L  +AG   +T+
Sbjct: 306 AQYHTSTAGDEAIQQWEAEVSAGALPADIEQVTIEASVVSNGTVTAAILFKQAGLCPTTS 365

Query: 367 EARRHLKSNAIKINN--SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +ARR +        +   +IS+    I +        + L  GKK +   +L
Sbjct: 366 DARRLISQGGAYFGDDLQVISSHDQAIPIT-----NGLLLKAGKKRYARLNL 412


>gi|4680649|gb|AAD27714.1|AF132939_1 CGI-04 protein [Homo sapiens]
          Length = 476

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 132/431 (30%), Positives = 202/431 (46%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 42  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 101

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-------GIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N   ++                G
Sbjct: 102 RAGHNVIALVGGATAALGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 161

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 162 RSWGSFTVLDNSAWYQKQHLVDFLAAVGVHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 221

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T  L+T+ +G K+
Sbjct: 222 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVTLITSTTGAKL 281

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN++ TSP+  +Q++    +  V  + K  T LP+ EID + +L     E 
Sbjct: 282 GKSAGNAVWLNRDKTSPFELYQFFVRQPEDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 341

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 342 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFF 401

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N +   I  Q     G   L
Sbjct: 402 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 461

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 462 KIGKRNFYIIK 472


>gi|315452765|ref|YP_004073035.1| tyrosyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131817|emb|CBY82445.1| tyrosyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 400

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 99/390 (25%), Positives = 165/390 (42%), Gaps = 28/390 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +        G+D TA  LH GH   L  L  LQK G     L+G  T+ IGDPS + E+R
Sbjct: 33  TGQRFIVKAGFDPTAPDLHLGHAVLLEKLATLQKHGGFVKFLIGDFTARIGDPSGKSETR 92

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  + +QEN +         +          +  N TWL +      +  + S FSV 
Sbjct: 93  KPLSEEAVQENAKTYAKQVFRVLDPAL----TEVCFNSTWL-NPLGTSGILALTSKFSVA 147

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R +  Q +S +EF Y +LQ YD V L    +C L++GG+DQ  N++ G  
Sbjct: 148 RMLERDDFEKRYRNHQPISIVEFLYPLLQGYDSVVL----ECDLELGGNDQKFNLMVGRF 203

Query: 212 LGERLK-TPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L        +   LT PLL       KM K+L   I + +E  S Y       +I D  +
Sbjct: 204 LQRAYGLDKEQSVLTMPLLEGLDGVHKMSKSLGNYIGITEEPASMYA---KLLSISDDLM 260

Query: 270 VSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+     +I       +         K+ +A EIT   H  E+A+ A     + 
Sbjct: 261 WRYYELLSAKTSDQIANLQEAVRAHRAHPKAVKEELALEITARWHSEEQAQSAKAEFDKV 320

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F        MP           G  + +++ +     S+++ARR +    +++N+ ++ +
Sbjct: 321 FRHKQTPSQMPEWH-----FENGAWIASVLKECQLCPSSSQARRDILGGGVRLNHEVMKD 375

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++ Q         G+  +  GK+   + H+
Sbjct: 376 DQYQFSK------GSYIVQVGKRKFALVHI 399


>gi|153956124|ref|YP_001396889.1| tyrosyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|146348982|gb|EDK35518.1| TyrS2 [Clostridium kluyveri DSM 555]
          Length = 402

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 176/409 (43%), Gaps = 29/409 (7%)

Query: 18  IHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + +  EL         +   +   +G D +A  +H GH   L  +  +Q  GH+ + 
Sbjct: 15  VSILVDEDELRNKLTEFIQNNRPLIIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDPS + + R  +  ++++EN           +     K    +  N  WL
Sbjct: 75  IIGDFTGKIGDPSGKSKGRNALTDEQVRENARTYFEQIFKVLD----KKKTTVRYNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + +  + +  +V RM+  +  ++R      +   EF Y ++QAYD +EL    +
Sbjct: 131 SKLNF-EDVLRLAATTTVARMMERDDFQNRFTNNIPIGIHEFFYPLMQAYDSIEL----N 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI+ G  L + +   +  A+  PLL       KM K+L   I + +  
Sbjct: 186 ADIELGGTDQTFNILMGRTLQKTMGQSQQVAMFMPLLEGLDGVEKMSKSLENYIGVYE-- 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTM 309
            S    ++    + D  ++ + +  T      I+  R   +QGK   + K  +A  IT++
Sbjct: 244 -SAKVMFKKVMEVPDELILKYFELATDEHPDRIEAIRQELVQGKNPRDIKYALAEIITSL 302

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  +E  +A     + F        +P +++     S  + ++ L+V+ GF  S +E R
Sbjct: 303 YHTEQEVIEAKEYYDKAFIKKAIPDQIPELAVKAQ--SHLVEIIPLLVENGFIKSNSEFR 360

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           R ++ N +++N   + +    +   D        L  GKK  +     G
Sbjct: 361 RLVQQNGVQLNQHKLKHIDSILLYGD-------VLKIGKKRFVKIIWEG 402


>gi|115305815|sp|Q7TUT0|SYY_PROMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 415

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/396 (23%), Positives = 159/396 (40%), Gaps = 27/396 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           +       +   +G D T   +H GH      L   Q  GH  + ++G  T+ IGDP+ +
Sbjct: 38  EAREQNRPLRVKLGIDPTGRDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGK 97

Query: 88  DESRRMMRSQEIQENIEKIKGIF------SSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
             +R  + S++I+ N                 +   T      +  N  WL  +   +++
Sbjct: 98  SSTRVQLTSEQIEANATTYLAQLGQGQSAEKALLDFTTPGRLEVRRNTEWLADLDLPEVI 157

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
             +G+  +V +ML+ E   +R      ++  EF Y +LQ YD V +       +++GG+D
Sbjct: 158 GLLGT-ATVGQMLAKEDFGNRYGSGVPIALHEFLYPLLQGYDSVAVQ----ADVELGGTD 212

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  N+  G DL         F L  P+L       KM K+LS  + LN++  S Y+    
Sbjct: 213 QKFNVAMGRDLQRHFDQRPQFGLLLPILAGLDGVQKMSKSLSNTVGLNEDPLSMYS---K 269

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
              + DA V S+   LT L    +            E +K +A  +T   HG   AE A 
Sbjct: 270 LEKVPDALVSSYVVLLTDLDPEAL-------PVNPRERQKAMAIAVTASRHGIAAAEAAQ 322

Query: 321 TAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             A      S   +  +P   +S  +V+       L+   G   S++EARR +K  A+++
Sbjct: 323 NDAARLVSGSQDDAASVPEAFLS--DVNFPAKAFYLLSAIGLCASSSEARRQIKGGAVRL 380

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +   I++  L+             L  GKK      
Sbjct: 381 DGEKITDPNLEFTDSSLLMGK--VLQVGKKTFRRLT 414


>gi|33863670|ref|NP_895230.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33635253|emb|CAE21578.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 408

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/396 (23%), Positives = 159/396 (40%), Gaps = 27/396 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           +       +   +G D T   +H GH      L   Q  GH  + ++G  T+ IGDP+ +
Sbjct: 31  EAREQNRPLRVKLGIDPTGRDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGK 90

Query: 88  DESRRMMRSQEIQENIEKIKGIF------SSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
             +R  + S++I+ N                 +   T      +  N  WL  +   +++
Sbjct: 91  SSTRVQLTSEQIEANATTYLAQLGQGQSAEKALLDFTTPGRLEVRRNTEWLADLDLPEVI 150

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
             +G+  +V +ML+ E   +R      ++  EF Y +LQ YD V +       +++GG+D
Sbjct: 151 GLLGT-ATVGQMLAKEDFGNRYGSGVPIALHEFLYPLLQGYDSVAVQ----ADVELGGTD 205

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  N+  G DL         F L  P+L       KM K+LS  + LN++  S Y+    
Sbjct: 206 QKFNVAMGRDLQRHFDQRPQFGLLLPILAGLDGVQKMSKSLSNTVGLNEDPLSMYS---K 262

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
              + DA V S+   LT L    +            E +K +A  +T   HG   AE A 
Sbjct: 263 LEKVPDALVSSYVVLLTDLDPEAL-------PVNPRERQKAMAIAVTASRHGIAAAEAAQ 315

Query: 321 TAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             A      S   +  +P   +S  +V+       L+   G   S++EARR +K  A+++
Sbjct: 316 NDAARLVSGSQDDAASVPEAFLS--DVNFPAKAFYLLSAIGLCASSSEARRQIKGGAVRL 373

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +   I++  L+             L  GKK      
Sbjct: 374 DGEKITDPNLEFTDSSLLMGK--VLQVGKKTFRRLT 407


>gi|88807457|ref|ZP_01122969.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788671|gb|EAR19826.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 400

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 88/396 (22%), Positives = 153/396 (38%), Gaps = 27/396 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
                   +   +G D T SS+H GH      L   Q  GH  + ++G  T+ IGDP+ +
Sbjct: 23  KAETDGRPLRVKLGIDPTGSSIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGK 82

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETWLCSIKYIDLL 141
            ++R  + ++++  N                   D           N  WL  +     +
Sbjct: 83  SDTRVQLTAEQVDANAATYLAQLGQGQPKDMALLDFETPGRLEVRRNSEWLEEMDL-PAV 141

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
             +    +V +ML+ +    R      ++  EF Y +LQ YD V +    +  +++GG+D
Sbjct: 142 INLLGTATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----NADVELGGTD 197

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  N+  G DL         F L  P+L       KM K+L   + L ++  S Y+    
Sbjct: 198 QKFNVAMGRDLQRHFGKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEEDPLSMYS---K 254

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
              + D  +  +   LT L ++ +            E +K +A  +T   HG   AEKA 
Sbjct: 255 LEKVGDGAINDYVTLLTDLDLAVLPE-------NPREKQKAMALAVTASRHGLAAAEKAQ 307

Query: 321 TAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
           + A          +  +P  S+  ++V+       L+   G   S++EARR +K  A+++
Sbjct: 308 SDAATLVGGAGDAAAEVPEASL--EQVNFPAKAFYLLSAVGICASSSEARRQIKGGAVRL 365

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               IS+   +    +        L  GKK      
Sbjct: 366 EGEKISDPNQEFASAEELEGK--VLQLGKKTFRRLT 399


>gi|225390125|ref|ZP_03759849.1| hypothetical protein CLOSTASPAR_03875 [Clostridium asparagiforme
           DSM 15981]
 gi|225043817|gb|EEG54063.1| hypothetical protein CLOSTASPAR_03875 [Clostridium asparagiforme
           DSM 15981]
          Length = 413

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 174/406 (42%), Gaps = 26/406 (6%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + + +   E+     +       +   +G D +A  +H GH   L  +  LQ  GHK + 
Sbjct: 24  VAEHTAVSEIRAKLQKAADEDRPLIVKLGLDPSAPDIHLGHSVVLRKIRQLQDLGHKAVI 83

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I     K    +  N  W 
Sbjct: 84  IIGDYTGRIGDPTGKSKTRKQLTEEEVLINAQTYQNQIFKIID----KNKTEVRYNSEWF 139

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + D+L       +V RML  +    R      LS  EF Y ++QAYD V +     
Sbjct: 140 EKMNFSDILTLASKC-TVARMLERDDFHKRYTNHLPLSIHEFFYPLMQAYDSVAIK---- 194

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI+ G  + +         L  PLL       KM K+L   I +++  
Sbjct: 195 ADIELGGTDQTFNILMGRYIQKDYGLESQLTLFMPLLEGIDGIEKMSKSLGNYIGIDEA- 253

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
             P+  ++    I D  ++ +    T +   E+  +AK   +G+   + K  +A EIT +
Sbjct: 254 --PHTIYEKVMKIPDNMIIKYYNLCTDIHPDEVGEIAKRLEEGENPRDIKMELAYEITKL 311

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
             G + A  A    ++ F   +  + +  + I  ++    M +L  +++ G   S +E R
Sbjct: 312 YCGEDGAAAARRRFIDVFQRDLIPEDIEILHIGNEDNLEEM-ILAALLETGKFKSKSEIR 370

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R  K   +K N   +     +IK  + ++ GNI L  GKK+     
Sbjct: 371 RLAKQGGVKWNGDRV----AEIKDINLNAGGNI-LRIGKKHIFKIE 411


>gi|239611023|gb|EEQ88010.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 592

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 117/481 (24%), Positives = 211/481 (43%), Gaps = 70/481 (14%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+  +   L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---------- 113
              G + + L+GG T  +GDP+ R   R  M +   +EN+  +                 
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
              +       A ++NN +W     + ++++ +G    +  ML  ++V++RL+  + ++ 
Sbjct: 196 HGYESEWIWRRA-IVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMAL 254

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP------------ 219
            EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L               
Sbjct: 255 SEFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLMKANDEYWRKHAPRD 314

Query: 220 ------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                 +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q++  + D +V  + 
Sbjct: 315 EDRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVTDENVEQYL 374

Query: 274 KRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           K  T LP+  I  + +   ++     A+  +A+E   ++ G  EA +A       F    
Sbjct: 375 KYFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAAQAEKDHRSIFGGKT 434

Query: 332 HSQH---------------------MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
            +                        P I++ +  V  G     ++  AG A S  EA R
Sbjct: 435 PTSDELTPRPKRDINLSETSPFNAPSPHITLPRSLV-VGQFFHKVLWSAGMAPSKAEAFR 493

Query: 371 HLKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHL 416
            + +N   +    +++ I ++KL              +       + L  GK    I  +
Sbjct: 494 LVVNNGAAVASRSDSNAIMDDKLSYVPIKTWDKDMTEKFIIDDSLMILKVGKWKVKIIKI 553

Query: 417 C 417
            
Sbjct: 554 V 554


>gi|124022271|ref|YP_001016578.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123962557|gb|ABM77313.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 408

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/396 (23%), Positives = 159/396 (40%), Gaps = 27/396 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           +       +   +G D T   +H GH      L   Q  GH  + ++G  T+ IGDP+ +
Sbjct: 31  EAREQNRPLRVKLGIDPTGRDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGK 90

Query: 88  DESRRMMRSQEIQENIEKIKGIF------SSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
             +R  + S++I+ N                 +   T      +  N  WL  +   +++
Sbjct: 91  SSTRVQLTSEQIEANAATYLSQLGQGQSAEKALLDFTTPGRLEVRRNTEWLADLDLPEVI 150

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
             +G+  +V +ML+ E   +R      ++  EF Y +LQ YD V +       +++GG+D
Sbjct: 151 GLLGT-ATVGQMLAKEDFGNRYGSGIPIALHEFLYPLLQGYDSVAVQ----ADVELGGTD 205

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  N+  G DL         F L  P+L       KM K+LS  + LN++  S Y+    
Sbjct: 206 QKFNVAMGRDLQRHFDQRPQFGLLLPILAGLDGVQKMSKSLSNTVGLNEDPLSMYS---K 262

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
              I DA V S+   LT L    +            E +K +A  +T   HG   AE A 
Sbjct: 263 LEKIPDALVSSYVVLLTDLDPEAL-------PVNPRERQKAMALAVTASRHGIAAAEAAQ 315

Query: 321 TAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             A      S   +  +P   ++  +V+       L+   G   S++EARR +K  A+++
Sbjct: 316 NDAARLVSGSQDDAASVPEALLA--DVNFPAKAFYLLSAIGLCASSSEARRQIKGGAVRL 373

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +   I++  L+             L  GKK      
Sbjct: 374 DGEKITDPNLEFTDSSLLMGK--VLQVGKKTFRRLT 407


>gi|260942949|ref|XP_002615773.1| hypothetical protein CLUG_04655 [Clavispora lusitaniae ATCC 42720]
 gi|238851063|gb|EEQ40527.1| hypothetical protein CLUG_04655 [Clavispora lusitaniae ATCC 42720]
          Length = 524

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 121/470 (25%), Positives = 207/470 (44%), Gaps = 56/470 (11%)

Query: 3   AFKSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
            F+   ++ L  R  I  +++    ++    ++  +  Y G D TA SLH G+L  LM+L
Sbjct: 55  DFQGSLVAHLYSRNLIETLTSDDLYKITEHGNKQKLKLYCGADPTAESLHLGNLLPLMVL 114

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
                 GH  + L+GG T ++GDPS R   R  M + + ++N+  I+    +F+K G   
Sbjct: 115 LHFVLRGHDVVGLVGGATGVVGDPSGRTSERSAMEAAQREKNVRIIQEQIQTFLKRGIDY 174

Query: 121 TD---------------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
                               +NN  W  S+K +D L   G    V++ML+ +S+ SRL+ 
Sbjct: 175 AKSRNIEIAKDDSKLGSIQSVNNADWWKSVKLLDFLATYGRHIRVSQMLARDSISSRLES 234

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG------------ 213
           +Q + F EF Y ILQAYDF  L +N    LQ+GG+DQWGNI  GIDL             
Sbjct: 235 QQGIGFNEFTYQILQAYDFWHLFQNEGVNLQIGGNDQWGNITAGIDLISRLQKSTETKSK 294

Query: 214 -ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
            E+      F +T PLLTT SG K GK+   A++++++ T+P+  +Q++ N  D  V   
Sbjct: 295 AEKEHDSSAFGITVPLLTTPSGQKFGKSAGNAVFISEKSTTPFQMYQFFINSQDEMVFKL 354

Query: 273 AKRLTTLPMSEIDR---MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
            K +T LP+  I+        +   +  A++I+A E+  ++HG    ++ A      F  
Sbjct: 355 LKIMTLLPLEAIETVIVPKHEKDPGLRIAQRILAREVVDLIHGNGVGDEMAYITSFLFPT 414

Query: 330 SIHSQH-----------------MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                                  +  + +S       + + TL+       S NE +  +
Sbjct: 415 PDQPFDDDITADKLISKFRKSGILRALKLSSFPDPTDLKMSTLLSSV-LEMSKNETKALI 473

Query: 373 KSNAIK--INNSIISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  +   I+     +    +   K         + +  GK+ + +  + 
Sbjct: 474 RAGGVYLGIDRRQFVDPDDVVLFDKENHLIDGKLLLVRTGKQKYYVVEVS 523


>gi|261206034|ref|XP_002627754.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592813|gb|EEQ75394.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 592

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 117/481 (24%), Positives = 211/481 (43%), Gaps = 70/481 (14%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+  +   L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---------- 113
              G + + L+GG T  +GDP+ R   R  M +   +EN+  +                 
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
              +       A ++NN +W     + ++++ +G    +  ML  ++V++RL+  + ++ 
Sbjct: 196 HGYESEWIWRRA-IVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMAL 254

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP------------ 219
            EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L               
Sbjct: 255 SEFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLMKANDEYWRKHAPRD 314

Query: 220 ------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                 +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q++  + D +V  + 
Sbjct: 315 EDRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVTDENVEQYL 374

Query: 274 KRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           K  T LP+  I  + +   ++     A+  +A+E   ++ G  EA +A       F    
Sbjct: 375 KYFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAAQAEKDHRSIFGGKT 434

Query: 332 HSQH---------------------MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
            +                        P I++ +  V  G     ++  AG A S  EA R
Sbjct: 435 PTSDELTSRPKRDINLSETSPFNAPSPHITLPRSLV-VGQFFHKVLWSAGMAPSKAEAFR 493

Query: 371 HLKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHL 416
            + +N   +    +++ I ++KL              +       + L  GK    I  +
Sbjct: 494 LVVNNGAAVASRSDSNAIMDDKLSYVPIKTWDKDMTEKFIIDDSLMILKVGKWKVKIIKI 553

Query: 417 C 417
            
Sbjct: 554 V 554


>gi|219856456|ref|YP_002473578.1| hypothetical protein CKR_3113 [Clostridium kluyveri NBRC 12016]
 gi|219570180|dbj|BAH08164.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 404

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 176/409 (43%), Gaps = 29/409 (7%)

Query: 18  IHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + +  EL         +   +   +G D +A  +H GH   L  +  +Q  GH+ + 
Sbjct: 17  VSILVDEDELRNKLTEFIQNNRPLIIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVI 76

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDPS + + R  +  ++++EN           +     K    +  N  WL
Sbjct: 77  IIGDFTGKIGDPSGKSKGRNALTDEQVRENARTYFEQIFKVLD----KKKTTVRYNSEWL 132

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + +  + +  +V RM+  +  ++R      +   EF Y ++QAYD +EL    +
Sbjct: 133 SKLNF-EDVLRLAATTTVARMMERDDFQNRFTNNIPIGIHEFFYPLMQAYDSIEL----N 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI+ G  L + +   +  A+  PLL       KM K+L   I + +  
Sbjct: 188 ADIELGGTDQTFNILMGRTLQKTMGQSQQVAMFMPLLEGLDGVEKMSKSLENYIGVYE-- 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTM 309
            S    ++    + D  ++ + +  T      I+  R   +QGK   + K  +A  IT++
Sbjct: 246 -SAKVMFKKVMEVPDELILKYFELATDEHPDRIEAIRQELVQGKNPRDIKYALAEIITSL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  +E  +A     + F        +P +++     S  + ++ L+V+ GF  S +E R
Sbjct: 305 YHTEQEVIEAKEYYDKAFIKKAIPDQIPELAVKAQ--SHLVEIIPLLVENGFIKSNSEFR 362

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           R ++ N +++N   + +    +   D        L  GKK  +     G
Sbjct: 363 RLVQQNGVQLNQHKLKHIDSILLYGD-------VLKIGKKRFVKIIWEG 404


>gi|311030916|ref|ZP_07709006.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. m3-13]
          Length = 404

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/410 (22%), Positives = 171/410 (41%), Gaps = 25/410 (6%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +  +G    ++    L  L     S+  +T  +G D +A  +H GH   L  +  +Q  
Sbjct: 10  TIIMKGAQEIVNKEELLAKLEKSYESKTPLTVKLGLDPSAPDIHLGHAVVLRKMKQMQDL 69

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK + ++G  T  IGDP+ + + R+ +  ++++ N +         +          + 
Sbjct: 70  GHKIVIIIGDFTGRIGDPTGKAKGRKALSDEQVKLNAQTYCEQIFKVLD----AEKTTVR 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + + + ++ +  SV R+L  +  + R   +  +   EF Y ++QAYD VE
Sbjct: 126 FNSEWLFKLTF-EEVIKLAATTSVARILERDDFQKRYNSQVPIGIHEFFYPLMQAYDSVE 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           +       +++GG+DQ  NI+ G  L ++    K  A+  PLL       KM K+L   I
Sbjct: 185 IQ----ADIELGGTDQTFNILMGRTLQKQWGLEKQVAIFMPLLEGLDGVEKMSKSLGNYI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            +N+        ++    + D  ++ + +  T     +I    +   QG    + K  +A
Sbjct: 241 GVNEA---AEVMFKKVMEVPDELIIKYFELATDEHPDDIHNFVQQLEQGANPRDFKLELA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             IT +  G EE ++A T     F        +P + I        + ++  +V  G   
Sbjct: 298 IIITNLYCGEEETKRAITFYETAFSKKEIPDDIPELLIEIG-AETVLAIIPQLVDKGLVK 356

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           S +E  R +K N +++N        L I   D     +  L  GKK  I 
Sbjct: 357 SKSEFMRLIKQNGVQLNKEK-----LSIDELDRVLMNDEVLRIGKKRFIR 401


>gi|269926819|ref|YP_003323442.1| tyrosyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790479|gb|ACZ42620.1| tyrosyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 422

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 175/411 (42%), Gaps = 30/411 (7%)

Query: 12  LSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +RG    + +   L             +   +G D T + +H GH   L  L   Q  
Sbjct: 17  IIKRGAEKILPDEEALRYKLTTAQKEGRPLRVKLGIDPTVTDIHLGHTVPLRNLRRFQDL 76

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I ++G  T+ +GDPS R ++R  +  +++ EN    K   S  +        A ++
Sbjct: 77  GHTAILVLGDFTATVGDPSGRSKARPPLSHEQVLENAATYKEQVSKILDL----ERAEVV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
            N TWL  +   DL+  IGS  SV RML  E    R    +Q++   E  Y I+Q  D V
Sbjct: 133 YNSTWLAKLTLKDLIF-IGSHISVKRMLEGEYFGRRFEDPDQTVFLHEMFYPIMQGMDSV 191

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
            +    +  +++GG+DQ  N + G DL           +T PLL       KM K+L   
Sbjct: 192 SI----NADIELGGTDQEFNCLMGRDLQRLYGQEPQVVVTFPLLPGLTGTEKMSKSLGNY 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKI 301
           + ++         +     + D  +  + + LT +P+ EI+   +       +  E KK 
Sbjct: 248 VGVSWG---AQEQFNKLMTMSDDHIGIYYRLLTDVPIEEIEEKIQAIQNGQADPREVKKQ 304

Query: 302 IATEITTMVHGREEAEKAATAAMECFD---MSIHSQHMPT-ISISKDEVS-RGMGLLTLI 356
           + TEI +  HG E A +AA       +       +  +P+ I ++K +++  G  L  ++
Sbjct: 305 LVTEIVSQFHGPEAARRAAEDYERYAEIRRTGGKTDQLPSNIPVAKIKLNPEGTRLTHIL 364

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           V  G A+S +EA+R ++   +++   ++ ++   I            L  G
Sbjct: 365 VTTGMASSNSEAKRLIRQGGVRLRGEVVKDDTHVITPGQLH---EALLQVG 412


>gi|150017276|ref|YP_001309530.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903741|gb|ABR34574.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 403

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 172/420 (40%), Gaps = 28/420 (6%)

Query: 4   FKSDFLSILSE-RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQL 57
            K +    +   R  +  I +  +L+            +   +G D TA  +H GH   L
Sbjct: 1   MKKNTEEQIKIIRKGVADIISIDDLEKKIIKSAKEDKPLIIKLGLDPTAPDIHLGHAVVL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
             +  +Q  GH+ + ++G  T  IGDP+ + ++R+ +  +E+ EN    +      +   
Sbjct: 61  RKIKQMQDLGHRAVIIIGDFTGKIGDPTGKSKTRKPLTKEEVVENALTYQKQIFKILDRD 120

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +  N  WL  + + + + ++ +  +V RML  E  + R      +   EF Y 
Sbjct: 121 ----KTEIKFNSEWLSELSF-EEVLKLAATTTVARMLEREDFKKRYNSNTPIGIHEFFYP 175

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTK 236
           ++Q YD + L       +++GG+DQ  NI+ G  L +     +  A+  P+L       K
Sbjct: 176 LMQGYDSIALK----ADIELGGTDQTFNILMGRTLQKNAGMEQQTAIFMPILEGLDGKEK 231

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKE 294
           M K+L   I + +   S    ++    I D  ++ + +  T     +I   +     GK 
Sbjct: 232 MSKSLGNYIGIQE---SAEIMFKKVMEIPDDLIIKYYELATDEHPDKIRGIKEELDNGKN 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K  +A  IT + H  EE++ A       F        +P I+IS  E S    +  
Sbjct: 289 PRDVKFELAKIITRLYHAEEESKFALEYFENVFKNKNIPDEVPEINIS-SECSLLEDVGK 347

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++VK+    S NE +R L    + +N   +S+    I        G+I +  GKK  +  
Sbjct: 348 VLVKSNLIKSYNEFKRLLSQGGVYVNMQKVSDFNNII-----IKNGDI-IKLGKKKFVKI 401


>gi|37523984|ref|NP_927361.1| tyrosyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708138|sp|Q7ND21|SYY_GLOVI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|35214990|dbj|BAC92356.1| tyrosyl tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 402

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 28/385 (7%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D T   LH GH   L  L   Q  GH  I L+GG T+ IGDP+ + E+R  +
Sbjct: 38  PLRVKLGIDPTRPDLHLGHTVVLRKLREFQDLGHTAILLIGGFTAQIGDPTGKSEARPRL 97

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            + E++E  E         + +        + NN  WL  +    +++ + S  SV +ML
Sbjct: 98  SAAEVEEYAETYLDQARLILNFD----TLEVRNNTEWLSGLDLAAIIKLLAS-TSVAQML 152

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           + E    R +   ++   EF Y ++Q YD V L    D  +++GG+DQ  N++ G +L E
Sbjct: 153 AKEDFGQRYEAGTAIYLHEFLYPLMQGYDSVAL----DADIELGGTDQRFNLLMGRNLQE 208

Query: 215 RLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                   ALT PLL       KM K+L   + + ++  + Y+         DA V ++ 
Sbjct: 209 LFGKKPQLALTVPLLVGLDGVKKMSKSLDNYVGVTEDPLTMYS---KLEKTPDALVETYF 265

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM---- 329
           + LT L +S +            E +K +A  +T  +H  E+A +A  AA          
Sbjct: 266 ELLTDLSVSAL-------SANPRERQKRLALAVTGWLHSPEQALRAQEAAAAMVTGSGGT 318

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + +P  S++  E++  + L  L+  AG   + +E  R +K+ A+++N   I++   
Sbjct: 319 GADLEAVPEFSLT--EIAFPVRLANLLKAAGLCPTVSEGMRQIKNGAVRLNQERITDPNC 376

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIIC 414
                   +     L  GKK+    
Sbjct: 377 GFAEAAELTG--AVLQVGKKHFRRL 399


>gi|283954835|ref|ZP_06372351.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793675|gb|EFC32428.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 401

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 182/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L         +     G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGKIFFIKAGFDPTAPDLHLGHSVILTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLNKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +    ++  + S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGATGIVE-LTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---E 294
            K+L+  I + ++    Y       +I D  +  + + L+   + EI ++ +   +    
Sbjct: 232 SKSLNNYIGVTEKANDMYA---KILSISDELMFRYYELLSQKSLEEIAQIKRDIEQGSLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA+ A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEADNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NAI +N+  +S+ ++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAISVNSQKVSDGQMHLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|317969063|ref|ZP_07970453.1| tyrosyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 420

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 93/402 (23%), Positives = 162/402 (40%), Gaps = 31/402 (7%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           +   +   +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +
Sbjct: 39  EAEKASRPLRIKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGK 98

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETWLCSIKYIDLL 141
             +R  + ++E++ N                   D           N  WL S+    ++
Sbjct: 99  SATRVQLTAEEVESNARTYLQQLGQGQDPARALLDFETPGRLEVRRNSEWLASLDLPKVI 158

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
             +G   +V +ML+ E   +R      +S  EF Y +LQ YD V +       L++GG+D
Sbjct: 159 ELLGI-STVGQMLAKEDFANRYGSGTPISLHEFLYPLLQGYDSVAVQ----ADLELGGTD 213

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  N+  G DL         F +  P+L       KM K+L   + L ++  S Y+    
Sbjct: 214 QKFNVAMGRDLQRHFGQRTQFGMLLPILAGLDGVQKMSKSLGNTVGLAEDPLSMYS---K 270

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
              + DA V  +   LT L ++ +            E +K +A E+T   HG+  A++A 
Sbjct: 271 LEKVPDAAVEEYLTLLTNLDLAAL-------PDNPRERQKAMALEVTRQRHGQAAADQAQ 323

Query: 321 TAAMECFDM----SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
             A +              +P  S++  EV+       L+   G   S++EARR ++   
Sbjct: 324 ADAGKLVGGAKGSGAADAEVPEASLA--EVNFPAKAFYLLSAVGICASSSEARRQIQGGG 381

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +K++   +++   +    D  +     L  GKK      + G
Sbjct: 382 VKLDGEKLADPNQEFAGPDQLAGK--VLQLGKKTFRRL-VAG 420


>gi|317489805|ref|ZP_07948303.1| tRNA synthetase class I [Eggerthella sp. 1_3_56FAA]
 gi|325830069|ref|ZP_08163526.1| tyrosine--tRNA ligase [Eggerthella sp. HGA1]
 gi|316911090|gb|EFV32701.1| tRNA synthetase class I [Eggerthella sp. 1_3_56FAA]
 gi|325487536|gb|EGC89974.1| tyrosine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 403

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 100/407 (24%), Positives = 167/407 (41%), Gaps = 22/407 (5%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    +     L+ L     +   +G D TA  +H GH   L  L   Q  GH    ++G
Sbjct: 14  GAAQIVPESALLEKLKRGTPLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIG 73

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
            GT++IGDPS R+ +R  + S++I+ N +         +          +  N  WL S+
Sbjct: 74  DGTALIGDPSGRNTTRPQLTSEQIKANAQTYVDQAFKILDP----EKTTLRYNSEWLLSL 129

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
             ++ L ++ S F+V R+L  +    R    Q +S  EF Y ++QAYD V +       +
Sbjct: 130 N-MEDLLKLASNFTVARILERDDFHKRYTNSQPISLHEFLYPLMQAYDSVVIK----ADV 184

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSP 254
           ++GG+DQ  N++ G +L E++       LT PLL  T    KM K+    I L      P
Sbjct: 185 ELGGTDQLFNLLAGRELMEKMGMEPQVCLTLPLLEGTDGVQKMSKSYGNYIGLT---DEP 241

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVH 311
            + +    +I D  +V + +  + LP+ +ID + +         N+ K+ +A  I    +
Sbjct: 242 ADMFGKVMSIPDELMVKYYRLASALPVDQIDEIERGLAADELHPNKVKRALAKNIVAAYY 301

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
               A+ A       F        +P  +        G + L  L+  A  A S  EARR
Sbjct: 302 DEAAAQAAEEQFDLVFKQHAVPDDIPEFAADLTPNDDGTVYLAKLLADASLAASAGEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +    +K+N   +  +   +            L  GK+      L 
Sbjct: 362 LIDGGGVKVNGEALPAKSYNVDPALLAG---ATLQVGKRKF--VKLV 403


>gi|257790356|ref|YP_003180962.1| tyrosyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257474253|gb|ACV54573.1| tyrosyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 403

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 100/407 (24%), Positives = 167/407 (41%), Gaps = 22/407 (5%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    +     L+ L     +   +G D TA  +H GH   L  L   Q  GH    ++G
Sbjct: 14  GAAQIVPESALLEKLKRGTPLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIG 73

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
            GT++IGDPS R+ +R  + S++I+ N +         +          +  N  WL S+
Sbjct: 74  DGTALIGDPSGRNTTRPQLTSEQIKANAQTYVDQAFKILDP----EKTALRYNSEWLLSL 129

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
             ++ L ++ S F+V R+L  +    R    Q +S  EF Y ++QAYD V +       +
Sbjct: 130 N-MEDLLKLASNFTVARILERDDFHKRYTNSQPISLHEFLYPLMQAYDSVVIK----ADV 184

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSP 254
           ++GG+DQ  N++ G +L E++       LT PLL  T    KM K+    I L      P
Sbjct: 185 ELGGTDQLFNLLAGRELMEKMGMEPQVCLTLPLLEGTDGVQKMSKSYGNYIGLT---DEP 241

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVH 311
            + +    +I D  +V + +  + LP+ +ID + +         N+ K+ +A  I    +
Sbjct: 242 ADMFGKVMSIPDELMVKYYRLASALPVDQIDEIERGLAADELHPNKVKRALAKNIVAAYY 301

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
               A+ A       F        +P  +        G + L  L+  A  A S  EARR
Sbjct: 302 DEAAAQAAEEQFDLVFKQHAVPDDIPEFAADLTPNDDGTVYLAKLLADASLAASAGEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +    +K+N   +  +   +            L  GK+      L 
Sbjct: 362 LIDGGGVKVNGEALPAKSYNVDPALLAG---ATLQVGKRKF--VKLV 403


>gi|293363882|ref|ZP_06610618.1| tyrosine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552372|gb|EFF41146.1| tyrosine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 410

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 132/423 (31%), Positives = 220/423 (52%), Gaps = 26/423 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L +RG + Q+SN ++L+ L  +     Y G+D TA SLH G+   ++ L   +K 
Sbjct: 2   NILDDLKQRGILKQVSNEQKLNSL--EKNSGVYSGFDPTAKSLHLGNYIVIINLLRFKKF 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G KP++++GG T +IGDPSF+D  R ++  + I EN  KIK     F           ++
Sbjct: 60  GFKPVAILGGTTGMIGDPSFKDSERVLLDEKTIFENKLKIKEQLEKF--------GLEVI 111

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ID LR IG   +V+ ML+ +SV SR+  E+ LSF EF+Y ++Q YDF +
Sbjct: 112 DNYDFYKDMNVIDFLRNIGKLINVSYMLAKDSVASRI--EKGLSFTEFSYQLIQGYDFYK 169

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL-SG 243
           L K+ +  +Q GGSDQWGN+  G+++  +      K  A+T  LLT + G K GK+   G
Sbjct: 170 LYKDNNVFVQCGGSDQWGNLTAGLEIISKNIGDSNKAVAITFNLLTDSEGNKFGKSTGGG 229

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           ++WL+KEM SPYN +Q+  N  D++V     +LT L +  I ++        +   A++I
Sbjct: 230 SLWLDKEMNSPYNLYQFLYNQPDSEVEKLLNQLTLLEIDYIKKVINEHLKNTQKRYAQEI 289

Query: 302 IATEITTMVHGREEAEKAATAAMECFDM-------SIHSQHMPTISISKDEVSRGMGLLT 354
           +A ++ + +H + +AE A   +   F+        SI+  +M    +    V++   L+ 
Sbjct: 290 LAYQVVSDIHSKNDAEHAKLTSQIMFNKTFDFTKISINQLNMVKNQLKIVVVNKNTNLID 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++      S  EAR  + + ++K N + I +E+  I            L  GKK   + 
Sbjct: 350 ELISKKIINSKREAREFISTKSLKWNMTPI-DEEF-ITKSTLFDGKYAILHKGKKQIYLV 407

Query: 415 HLC 417
            + 
Sbjct: 408 EIA 410


>gi|225556817|gb|EEH05105.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 598

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 120/480 (25%), Positives = 214/480 (44%), Gaps = 69/480 (14%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++ +  N   L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 80  RKSFLELMEERGLVNAVIGNRDALNRMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 139

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---------- 113
              G + + L+GG TS IGDP+ R   R  M S   +EN+  +                 
Sbjct: 140 YVHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLRRLGMSIERYGAK 199

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
              +Y      A ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++ 
Sbjct: 200 HGYEYEWIWRRA-IVNNNTWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMAL 258

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP------------ 219
            EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L               
Sbjct: 259 SEFVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPNP 318

Query: 220 ------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                 +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  + 
Sbjct: 319 EDRELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQYL 378

Query: 274 KRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           K  T LP++ I  + +   ++     A+  +A+E   ++ G  EA +A       F    
Sbjct: 379 KYFTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQT 438

Query: 332 HSQHM--------------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            +  M                    P I++ +  V  G     ++  AG A S  EA R 
Sbjct: 439 PTIEMEARTKRDLNLSETHPFNAPSPHITLPRSLV-VGQFFHKVLWSAGMAPSKAEAFRL 497

Query: 372 LKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
           + +N   +    +++ + ++K+              +       + L  GK    I  + 
Sbjct: 498 IVNNGASVASRSDSTAVMDDKMSYVPIKTWDKDMTKKFIIDDSMMILRVGKWKVKIIKIV 557


>gi|123969061|ref|YP_001009919.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199171|gb|ABM70812.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 412

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 94/401 (23%), Positives = 177/401 (44%), Gaps = 32/401 (7%)

Query: 22  SNPRELD----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           ++   L+       +   +   +G D T + +H GH      L   Q  GH  + ++G  
Sbjct: 24  TDQTFLEIIDYAKKNNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDF 83

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNET 130
           T+ IGDP+ ++++R  +  +++++N +              S + + +      +  N  
Sbjct: 84  TAQIGDPTGKNKTRVQLSEKQVKDNAKTYLTQLGMGKPANESILDFDSKD-RIEIRYNSE 142

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++  +GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +   
Sbjct: 143 WLKGLNLNSIIELMGS-ATVSQMLAKEEFNKRYTSQVPIALHEFLYPLLQGYDSVVVQ-- 199

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               +++GG+DQ  NI  G DL    K    F +  P+LT   G  KM K+    + L++
Sbjct: 200 --SDIELGGTDQKFNIAIGRDLQRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLSE 257

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +  S Y+       + D  + ++ + LT L +  ++           E ++ +A E+TT+
Sbjct: 258 DPLSMYS---KLEKVPDNIIPTYFELLTELDLRFLENS------NPRELQRRMALEVTTL 308

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG EEA KA +   +           +P ISI   EV   +    L+       S++E+
Sbjct: 309 FHGAEEALKAQSNCEKLFLGQKEKVGEIPEISIK--EVVFPVKFFYLLSALKLFKSSSES 366

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +R +K   +KI++  ++N  L    ++        L  GKK
Sbjct: 367 KRSIKGGGVKIDSQKVTNPDLVFNSKNDLEGK--ILQIGKK 405


>gi|193216674|ref|YP_001999916.1| tyrosyl tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001997|gb|ACF07212.1| tyrosyl tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 411

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 132/421 (31%), Positives = 210/421 (49%), Gaps = 23/421 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              + +  L  RG    IS+  + + L S   V  Y G+D TA SLH G+  Q++ L   
Sbjct: 1   MTKNLIVELKNRGIFSNISSEEKFNALESN--VGVYTGFDPTAKSLHLGNYVQIVNLLRF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +K G KP++++GG T +IGDPS+R   R+++  + I  N   IK     F          
Sbjct: 59  KKFGFKPLAVLGGLTGMIGDPSYRQAERKLLDEKTILANKNAIKKQLERF--------GL 110

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N         +D LR++G   ++N +LS ES+ +RL  E+ LSFLEF+Y ++Q +D
Sbjct: 111 TIFDNFAIYKDWSMLDFLRKLGPLVNINYLLSKESIATRL--EKGLSFLEFSYQLIQGWD 168

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +N + ++Q+GGSDQWGNI  G+++  +L        A+T+ LL   SG K GK+ 
Sbjct: 169 FKYLYENQNVKIQLGGSDQWGNITTGLEIIRKLHGEGSTAVAITANLLLDESGKKFGKST 228

Query: 242 -SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
             G++WL+KEMTSP+  +Q+  N  D  V  +   LT L   EI ++            A
Sbjct: 229 GGGSLWLDKEMTSPFAIYQFLLNRSDEKVEEYLNWLTFLSQEEIKKVIDQAKNNKAARLA 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLL 353
           +K +A E+   +H +E AE+    +   F  S +      +     ++ + E+      +
Sbjct: 289 QKALAYEVVKDIHSQEIAEQCIKISDILFAKSNNGLTKNDLVMLRGTLPEYEIKPNQKFI 348

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             I  +G  TS  E R  ++  +  I+  ++ NE   I   +FDS     L  GKK  II
Sbjct: 349 EAIKASGICTSNREIREFVQKKSFAIDGVVVDNENQIISFNNFDSE-FALLKKGKKEFII 407

Query: 414 C 414
            
Sbjct: 408 L 408


>gi|57505448|ref|ZP_00371376.1| tyrosyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016273|gb|EAL53059.1| tyrosyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 402

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 180/422 (42%), Gaps = 35/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           +   IL+E  RG   +I +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   NIKEILAEVKRGC-AEIIDEARIEDLIKNYYEKGENFYVKAGFDPTAPDLHLGHSVVLSK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G +   L+G  T  IGDPS ++ +R+ +  +E+ +N +  +      +     
Sbjct: 61  MAFLQKHGARVQFLIGDFTGQIGDPSGKNATRKKLSQEEVLKNAKTYESQVFKILD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  WL  +     + E+ S FSV RML  E    R + + S+S  EF Y +L
Sbjct: 117 KNKTDIVFNSKWLNELGA-AGIVELTSTFSVARMLEREDFTKRFREQSSISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKM 237
           Q YD V L       ++MGG+DQ  N++ G  L        +   +  PLL       KM
Sbjct: 176 QGYDSVALK----SDIEMGGTDQKFNLLMGRTLQRIYDAKKEQAIIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKE 294
            K+L+  I + +      + +    +I D  +  + + L+   + EI+      +     
Sbjct: 232 SKSLNNYIGVTEN---AKDIYAKILSISDELMFRYYELLSKKSLKEIETIKENIQNGSLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
               K+ +A E+    H +E A++A          +     +    I        + L  
Sbjct: 289 PKIVKENLALELVERFHSKELADEAKAEFDRVHSANALPSEITKFEIG----GGSVWLAK 344

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G   ST+ ARR + +N++ +N+  I +E++Q++L      G   L  GK+     
Sbjct: 345 ALVECGLENSTSAARRAIVANSVSVNSQKIRDEQMQLEL------GEYILQIGKRKFARL 398

Query: 415 HL 416
            +
Sbjct: 399 KV 400


>gi|251771280|gb|EES51861.1| tyrosyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 396

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 173/420 (41%), Gaps = 35/420 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  L  RG      +P +L             +    G+D TA  LH GH  
Sbjct: 1   MTDSVSSALDRLL-RGT-ADCVSPEDLRQKLERSARTGTPLRIKAGFDPTAPDLHIGHAV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L+ L   Q  GH+ + L+G  T +IGDP+ R E R+ +  +EI++N           + 
Sbjct: 59  LLLKLREFQDLGHQVLFLIGDFTGMIGDPTGRSEIRKPLSPEEIRQNAATYAAQVDRILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    ++ N  W+  +   + +  + +  +V   L  +  + R+++   +   E  
Sbjct: 119 ----RERTEVVYNSRWMAELGT-EGMIRLAARQTVAHFLDRDDFKQRMEKNLPIHLHELL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASG 234
           Y ++Q YD V L       +++GG+DQ  N++ G DL           L+ PLL  T   
Sbjct: 174 YPLIQGYDSVALR----ADVELGGTDQLFNLLVGRDLQRSYGQEPQVVLSLPLLVGTDGE 229

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            KM K+L  A+ L   +  P   +    +I D+   S+A  LT L  SEI  +       
Sbjct: 230 KKMSKSLKNAVGL---LDPPGEMFGKLMSIPDSATASYALLLTRLSESEIANL------H 280

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             EAK  +A  IT   HG E A  A       F        +    +   E    + L T
Sbjct: 281 PREAKATVAQAITARFHGEEAARSAREEFDRQFSRRELPSEIAGFVV---EGPSPVRLST 337

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V++G A S + A++ ++  A+ ++ S +S+   +I            L  GK+ +   
Sbjct: 338 VMVRSGAARSESLAKQLIRQGAVDLDGSPVSDLFCEIVPA------GQLLRVGKRFYCRL 391


>gi|300776335|ref|ZP_07086193.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300501845|gb|EFK32985.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 398

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 26/403 (6%)

Query: 19  HQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             I     L+   +        ++  +G+D TA  LH GH   L  L   Q  GH+ I +
Sbjct: 10  AIILPENGLEEKLNQAKKENRKLSVKLGFDPTAPDLHLGHAVVLKKLKQFQDLGHQIIIV 69

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T+ IGDPS ++++R+ + ++E+Q N +      S  I          ++ N  WL 
Sbjct: 70  VGSFTARIGDPSGKNKARKPLSAEEVQHNAQTYINQLSKIID----VRKTKIVFNSDWLD 125

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++ + D+++ +    +V +++       R      ++  E  Y ILQ YD V++    +C
Sbjct: 126 TLNFSDVIQLLSK-VTVAQLMHRNDFNKRFTENTPIAMHELVYPILQGYDSVKI----EC 180

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            ++MGG+DQ  N   G  L E  + P    +  PLL       KM K+L+  I L     
Sbjct: 181 DIEMGGTDQLFNCTMGRQLQEVHQMPAQIVMCMPLLRGLDGKEKMSKSLNNIIGLT---D 237

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMV 310
            P   +    +I DA +  F    T     E         +G+     KKIIA  I T  
Sbjct: 238 EPNEMFGKTMSIPDALIEEFINLTTDFSPQEKAELLFRMAEGENPMNIKKIIAKNIITQY 297

Query: 311 HGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           H    A +A    +  F      +    +I I+   +   + L+ L  +     S +  R
Sbjct: 298 HNSTAANQAEQFFITQFQNKNFEEKEYQSIPINSLSIDNKISLVKLCHQLKNDLSKSAIR 357

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           R +++  ++INNS I++   +++          K+  GK++  
Sbjct: 358 RLIENGGVQINNSKITDSSEELE---LIPG--TKIKIGKRSFF 395


>gi|319761433|ref|YP_004125370.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330823297|ref|YP_004386600.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317115994|gb|ADU98482.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329308669|gb|AEB83084.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 410

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 166/411 (40%), Gaps = 30/411 (7%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L     +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EVSLRGVDELLPRQEWVQKLARSQATGQPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDPS R+ +R  + +++I+ N E      +  +          + 
Sbjct: 80  GHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAETYYTQAAKVLDPA----RTEIR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W         + E+ + ++V RM+       R     S+S  EF Y +LQ YD V 
Sbjct: 136 YNSEW-SDALGARGMIELSAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
           L       L++GG+DQ  N++ G  L +         LT PLL       KM K+ +  I
Sbjct: 195 LR----SDLELGGTDQKFNLLMGRHLQQEYGQEPQCVLTMPLLVGLDGVDKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
            + ++  + +       +I DA +  +   L+   ++EI  + K      N  +AK ++A
Sbjct: 251 GITEDANTMFAKV---LSISDALMWDWYTLLSFKSLAEIAALKKEVEAGRNPKDAKVMLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    A+ A                +P +S+S       +G+  L+ +AG A 
Sbjct: 308 KEITARFHSAAAADAAEQDFNN-RSKGGIPDEIPELSLS----GAPLGIGALLKQAGLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ST+EA R +          +  +  +          G   +  GK+     
Sbjct: 363 STSEANRLIDG------GGVRVDGGVVSDKGLRLGAGTYVVQVGKRKFARV 407


>gi|182419881|ref|ZP_02951119.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237668980|ref|ZP_04528964.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376250|gb|EDT73834.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657328|gb|EEP54884.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 416

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 90/433 (20%), Positives = 177/433 (40%), Gaps = 41/433 (9%)

Query: 3   AFKSDFLSILSERGFIHQI----------SNPRELDILCSQ-----GVVTAYIGYDLTAS 47
             K + L  ++      QI               L     +       +   +G D +A 
Sbjct: 5   KIKKEILEEVNMINIDEQIKIIMKGADEIIGLDTLKEKLKKSNEENRPLIVKLGLDPSAP 64

Query: 48  SLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
            +H GH   L  +  LQ  GHK + ++G  T  IGDP+ + + R+ + ++++ EN +  +
Sbjct: 65  DIHLGHTVVLRKMKQLQDLGHKIVIIIGDFTGKIGDPTGKAKGRKALSTEQVLENAKTYE 124

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                 +     K    +  N  WL  + + + ++   +  +V RML  E  + R + + 
Sbjct: 125 KQIFKILD----KEKTDVRFNSEWLSKLSFEETIKLASTM-TVARMLEREDFKKRYESQI 179

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L +         +  P
Sbjct: 180 PISIHEFFYPLMQGYDSVVL----NADIELGGTDQRFNVLMGRMLQKEYGQESQTTIFMP 235

Query: 228 LLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM---SE 283
           LL       KM K+L   I ++++    +        I D  ++ +   +T +       
Sbjct: 236 LLEGLDGKEKMSKSLGNYIGIDEDADVMFE---KAMRIPDELIIKYFNLVTDIHPDIIEG 292

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           I++          + K  +A EIT + +  E+ + A     + F       ++  I ++K
Sbjct: 293 IEKELNDGSINPRDIKMRLAREITLLYNNEEKTKSAEERFKKVFQKGQIPDNIEVIKVNK 352

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
                 + +  ++V   F  S NE RR      +K+N + IS+   +++++D      + 
Sbjct: 353 ----NNLDISEILVNNNFVKSKNELRRISNQGGLKVNENKISDLS-KVEIED-----KMI 402

Query: 404 LSFGKKNHIICHL 416
           +  GKK  +   L
Sbjct: 403 IQIGKKKFVCIEL 415


>gi|240281680|gb|EER45183.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325087830|gb|EGC41140.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 598

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 121/480 (25%), Positives = 214/480 (44%), Gaps = 69/480 (14%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++ +  N   L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 80  RKSFLELMEERGLVNAVIGNRDALNRMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 139

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---------- 113
              G + + L+GG TS IGDP+ R   R  M S   +EN+  +                 
Sbjct: 140 YVHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLKRLGMSIERYGAK 199

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
              +Y      A ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++ 
Sbjct: 200 HGYEYEWIWRRA-IVNNNTWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMAL 258

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP------------ 219
            EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L               
Sbjct: 259 SEFVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPNP 318

Query: 220 ------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                 +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  + 
Sbjct: 319 EDRELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQYL 378

Query: 274 KRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           K  T LP++ I  + +   ++     A+  +A+E   ++ G  EA +A       F    
Sbjct: 379 KYFTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQT 438

Query: 332 HSQHM--------------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            +  M                    P I++ +  V  G     ++  AG A S  EA R 
Sbjct: 439 PTIEMEARTKRDLNLSETHPFNAPSPHITLPRSLV-VGQFFHKVLWSAGMAPSKAEAFRL 497

Query: 372 LKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
           + +N   +    +++ I ++K+              +       + L  GK    I  + 
Sbjct: 498 IVNNGASVASRSDSTAIMDDKMSYVPIKTWDKDMTKKFIIDDSMMILRVGKWKVKIIKIV 557


>gi|254518268|ref|ZP_05130324.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912017|gb|EEH97218.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 402

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 89/404 (22%), Positives = 176/404 (43%), Gaps = 30/404 (7%)

Query: 21  ISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           I N  EL         +   +   +G D +A  +H GH   L  +  +Q  GHK + ++G
Sbjct: 19  IVNEEELRKKLEKAEKNNKPLIIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHKAVIVIG 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T  IGDP+ + + R+ +  +E+  N E  K      +     ++   +  N  WL  +
Sbjct: 79  DFTGKIGDPTGKAKGRKALTDEEVLRNAETYKTQIFKVLD----ESKTEVRFNSEWLSKL 134

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            + D+L+ + +  +V RML  +  ++R K    +   EF Y ++QAYD + L       +
Sbjct: 135 NFNDVLK-LAATTTVARMLERDDFQNRYKNNVPIGVHEFFYPLMQAYDSIALK----ADI 189

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSP 254
           ++GG+DQ  NI+ G  L + +      A+  P+L    G  KM K+L   I +N+     
Sbjct: 190 ELGGTDQTFNILMGRTLQKTMGEEGQVAMFMPILEGLDGIEKMSKSLGNYIGVNEPANIM 249

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHG 312
           +   +    + D+ ++ + +  T     +ID +     +G+   + K  +A  IT + H 
Sbjct: 250 F---KKVMEVPDSLIIKYFELATDEHPDKIDEIKNRLDRGENPRDIKLELAQIITNLYHC 306

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
             E + A       F        +P +++  +++     +++ +V   + +S  E  R +
Sbjct: 307 ENEVKSAMEFYNSAFTKKEIPDDIPNLTVESNKLRD---IVSNLVSEKYVSSKKEFTRLV 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +   ++IN   I++  + +  QD        +  GKK  +   +
Sbjct: 364 EQGGVQINGEKINSLDINLLTQD-------VIKIGKKKFVKLKI 400


>gi|327272181|ref|XP_003220864.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 481

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 128/429 (29%), Positives = 206/429 (48%), Gaps = 27/429 (6%)

Query: 14  ERGFIHQISN----PRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           ERG  H++         L  L   G   +  Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 42  ERGLFHEVFPPQAAEEHLLRLLEPGRPPIAVYCGFDPTADSLHAGHLLPLLGLLHFQRAG 101

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-------K 120
           H  I+L+GG T+ +GDPS R ++R  +  ++ +   E ++       +            
Sbjct: 102 HDVIALVGGATARLGDPSGRTQAREPLSEEKARAQAEGLREGLQRIFQNHRELFWSGARL 161

Query: 121 TDALMLNNETWLCSIKYIDLLRE-IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
               +L+N +WL     +  L    G    ++ +LS +S R+RL+  + +   EF Y  L
Sbjct: 162 GRLTLLDNTSWLARETVLGFLCGPAGVRLRMSTLLSRQSCRARLESPEGMGLAEFLYPAL 221

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF+ L +++ C +Q+GG+DQ GNI+ G DL  ++    +F +T PL+T   G K+GK
Sbjct: 222 QAYDFLHLRRHHGCLVQLGGADQLGNIMSGYDLVSKVTGEDVFGITVPLITNTVGNKLGK 281

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA- 298
           +   A+WLN+  TSP++ +Q++    D DV  + K  T LP+ EID + ++  KE  +  
Sbjct: 282 SSGNAVWLNRNKTSPFDLYQFFVRQPDKDVKRYLKLFTFLPLPEIDHIMEMHAKEPEKWG 341

Query: 299 -KKIIATEITTMVHGREEAEKAATAAME-CFDMSIHSQHMPTISIS---------KDEVS 347
            +K +A E+T +VHG+E  E A               + MP   +          +  + 
Sbjct: 342 PQKRLAAEVTKLVHGKEGLESAKRCTRALYHSDIAALETMPDQELQELFNEAPYVELLLE 401

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSF 406
            G  +L L  KA          R + S  + IN+  +++    + L Q     G   L  
Sbjct: 402 PGTTVLDLCRKANAIADGPRGHRDIISGGVSINHIKVTDPDAVLVLGQHILRNGLSLLRI 461

Query: 407 GKKNHIICH 415
           GK+N+ I  
Sbjct: 462 GKRNYYIVK 470


>gi|318042196|ref|ZP_07974152.1| tyrosyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 420

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 92/398 (23%), Positives = 158/398 (39%), Gaps = 31/398 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 43  EGRPLRVKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATR 102

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETWLCSIKYIDLLREIG 145
             + +++++ N                   D           N  WL S+    ++  +G
Sbjct: 103 VQLTAEQVEANAATYLAQLGQGQDPARALLDFETPGRLEVRRNSEWLASLDLPKVIELLG 162

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              +V +ML+ E   +R      +S  EF Y +LQ YD V +       L++GG+DQ  N
Sbjct: 163 I-STVGQMLAKEDFANRYGSGTPISLHEFLYPLLQGYDSVAIQ----ADLELGGTDQKFN 217

Query: 206 IICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +  G DL         F +  P+L       KM K+L   + L+++  S Y+       +
Sbjct: 218 VAMGRDLQRHFGQRTQFGMLLPILPGLDGVQKMSKSLGNTVGLSEDPLSMYS---KLEKV 274

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            DA V  +   LT L +  +            E +K +A E+T   HG   A++A   A 
Sbjct: 275 PDAAVEEYLTLLTDLDLEALPA-------NPRERQKAMAVEVTRQRHGESAAQQAQADAG 327

Query: 325 ECFDM----SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           +              +P  S++   V+       L+   G   S++EARR ++   +K++
Sbjct: 328 KLVGGASGSGAADADVPEASLAA--VNFPAKAFYLLSAVGVCASSSEARRQIQGGGVKLD 385

Query: 381 NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
              +S+   +    D  +     L  GKK      + G
Sbjct: 386 GEKLSDPNQEFAGPDQLAGK--VLQLGKKTFRRL-VAG 420


>gi|303321247|ref|XP_003070618.1| tyrosyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110314|gb|EER28473.1| tyrosyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 635

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 131/486 (26%), Positives = 205/486 (42%), Gaps = 74/486 (15%)

Query: 5   KSDFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +      LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G K + L+GG T+ IGDP+ R E R +M     + NI  I                K
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 116 YGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G     A      NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------RLKTPK--- 220
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D  +              K   
Sbjct: 259 EFCYPIMQGWDFWYLFQRK-VQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 221 -----LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATA----AMECFDM 329
            T +P   I  + +          A+  +A E   ++HG   AE+AA       M     
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEQAAKDHRTLFMTKASA 437

Query: 330 SIHSQHMPTISISKDEVSRGM------------------GLL------TLIVKAGFATST 365
                    I  ++ + + G                    L+       ++  AG  +S 
Sbjct: 438 GAPEGLAAEIEHAETDNAEGKHQKLHAFETATPHIILPRSLVINQFFHKVLWSAGMVSSK 497

Query: 366 NEARRHLKSNAIKI-----------NNS---IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +E  R + +N + +           +      +      I  +       + L  GK N 
Sbjct: 498 SEGFRLIVNNGVHVASRSDSREVMGDGVSYIPVKTWPANITEKFVIDGRLLILRIGKWNL 557

Query: 412 IICHLC 417
            I  + 
Sbjct: 558 KIIKIV 563


>gi|320035901|gb|EFW17841.1| tyrosyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 635

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 131/486 (26%), Positives = 205/486 (42%), Gaps = 74/486 (15%)

Query: 5   KSDFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +      LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G K + L+GG T+ IGDP+ R E R +M     + NI  I                K
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 116 YGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G     A      NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------RLKTPK--- 220
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D  +              K   
Sbjct: 259 EFCYPIMQGWDFWYLFQRK-VQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 221 -----LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATA----AMECFDM 329
            T +P   I  + +          A+  +A E   ++HG   AE+AA       M     
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEQAAKDHRTLFMTKASA 437

Query: 330 SIHSQHMPTISISKDEVSRGM------------------GLL------TLIVKAGFATST 365
                    I  ++ + + G                    L+       ++  AG  +S 
Sbjct: 438 GAPEGLAAEIEHAETDNAEGKHQKLHAFETATPHIILPRSLVINQFFHKVLWSAGMVSSK 497

Query: 366 NEARRHLKSNAIKI-----------NNS---IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +E  R + +N + +           +      +      I  +       + L  GK N 
Sbjct: 498 SEGFRLIVNNGVHVASRSDSREVMGDGVSYIPVKTWPANITEKFVIDGRLLILRIGKWNL 557

Query: 412 IICHLC 417
            I  + 
Sbjct: 558 KIIKIV 563


>gi|119180367|ref|XP_001241661.1| hypothetical protein CIMG_08824 [Coccidioides immitis RS]
          Length = 635

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 129/486 (26%), Positives = 202/486 (41%), Gaps = 74/486 (15%)

Query: 5   KSDFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +      LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G K + L+GG T+ IGDP+ R E R +M     + NI  I                K
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 116 YGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G     A      NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------RLKTPK--- 220
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D  +              K   
Sbjct: 259 EFCYPIMQGWDFWYLFQRK-VQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 221 -----LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVH---------------------- 311
            T +P   I  + +          A+  +A E   ++H                      
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEKAAKDHRTLFMTKASA 437

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL------TLIVKAGFATST 365
           G  E   A T   E  +     Q +     +   +     L+       ++  AG  +S 
Sbjct: 438 GAPEGLAAETEHAETDNAEGKHQKLHAFETATPHIILPRSLVINQFFHKVLWSAGMVSSK 497

Query: 366 NEARRHLKSNAIKI-----------NNS---IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +E  R + +N + +           +      +      I  +       + L  GK N 
Sbjct: 498 SEGFRLIVNNGVHVASRSDSREVMGDGVSYIPVKTWPADITEKFVIDGRLLILRIGKWNL 557

Query: 412 IICHLC 417
            I  + 
Sbjct: 558 KIIKIV 563


>gi|126696853|ref|YP_001091739.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126543896|gb|ABO18138.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 412

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/387 (24%), Positives = 173/387 (44%), Gaps = 28/387 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  NNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +++++N +              S + + +      +  N  WL  +    ++  +
Sbjct: 98  VQLSEKQVKDNAKTYLTQLGMGKPANESILDFDSKD-RIEIRYNSEWLKGLNLNSIIELM 156

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +       +++GG+DQ  
Sbjct: 157 GS-ATVSQMLAKEEFNKRYTSQVPIALHEFLYPLLQGYDSVVVQ----ADIELGGTDQKF 211

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           NI  G DL    K    F +  P+LT   G  KM K+    + L ++  S Y+       
Sbjct: 212 NIAIGRDLQRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLTEDPLSMYS---KLEK 268

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  + ++ + LT L +S ++           E ++ +A E+TT+ HG E+A KA +  
Sbjct: 269 VPDNLIPAYFELLTELDLSFLENS------NPRELQRRMALEVTTLFHGDEKALKAQSNC 322

Query: 324 ME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            +           +P IS+   EV   + L  L+       S++E++R +K   +KI++ 
Sbjct: 323 EKLFLGHKEKVGEIPEISLK--EVVFPVKLFYLLSALKLFKSSSESKRSIKGGGVKIDSE 380

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            + N  L    ++        L  GKK
Sbjct: 381 KVINPDLVFNSKNDLEGK--ILQIGKK 405


>gi|113954030|ref|YP_731401.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881381|gb|ABI46339.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 415

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 89/390 (22%), Positives = 152/390 (38%), Gaps = 27/390 (6%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R 
Sbjct: 43  GRPLRVKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATRV 102

Query: 93  MMRSQEIQENIEKIKGIF------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            + +++++ N                 +          +  N  WL  +    ++  +G+
Sbjct: 103 QLTTEQVEANATTYLRQLGQGQPKERALLDFETPGRLEVRRNSEWLGGLDLPQVIGLLGT 162

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
             +V +ML+ +    R      ++  EF Y +LQ YD V +    D  +++GG+DQ  N+
Sbjct: 163 -ATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----DADVELGGTDQKFNV 217

Query: 207 ICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
             G DL         F L  P+L       KM K+L   + L  +  S Y+       + 
Sbjct: 218 AMGRDLQRHFGQRTQFGLLLPILVGLDGVQKMSKSLGNTVGLEDDPLSMYS---KLEKVG 274

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           DA +  +   LT LP                + +K +A  +T   +G E A+KA   A  
Sbjct: 275 DAAINDYLMLLTDLPDESF-------PDNPRDKQKAMALVVTASRYGMEVAQKAQADAAT 327

Query: 326 CFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
               S  +   +P  S+S   V+       L+   G   S++EARR +K  A ++    I
Sbjct: 328 LVGGSGAASADVPEASLSA--VNFPAKAFYLLSAVGICASSSEARRQIKGGAARLEGEKI 385

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++   +             L  GKK     
Sbjct: 386 TDPNQEFVSASELEGK--VLQLGKKTFRRL 413


>gi|254526376|ref|ZP_05138428.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537800|gb|EEE40253.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 412

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 93/387 (24%), Positives = 170/387 (43%), Gaps = 28/387 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  NNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +++++N +              S + +        +  N  WL  +    ++  +
Sbjct: 98  VQLSEKQVKDNAKTYLAQLGMGKPANKSILDFDAKD-RIEIRYNSEWLKGLNLNSIIDLM 156

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           GS  +V++ML+ E    R   +  +S  EF Y +LQ YD V +       +++GG+DQ  
Sbjct: 157 GS-ATVSQMLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQ----SDIELGGTDQKF 211

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           NI  G DL    K    F +  P+LT      KM K+    + L ++  S Y+       
Sbjct: 212 NIAIGRDLQRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVGLTEDPLSMYS---KLEK 268

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  + ++ + LT L +S ++           E ++ +A E+TT+ HG EEA KA +  
Sbjct: 269 VPDNIIPTYFELLTELDLSFLENS------NPRELQRRMAFEVTTLFHGAEEALKAQSNC 322

Query: 324 ME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            +           +P IS+   EV   +    L+       S++E++R +K   +KI++ 
Sbjct: 323 EKLFLGHKEKVGEIPEISLK--EVVFPVKFFYLLSALKLFKSSSESKRSIKGGGVKIDSQ 380

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            + N  L    ++        L  GKK
Sbjct: 381 KVINPDLVFNSKNDLEGK--ILQIGKK 405


>gi|157413891|ref|YP_001484757.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157388466|gb|ABV51171.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 412

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 93/387 (24%), Positives = 170/387 (43%), Gaps = 28/387 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  NNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +++++N +              S + +        +  N  WL  +    ++  +
Sbjct: 98  VQLSEKQVKDNAKTYLAQLGMGKPANESILDFDAKD-RIEIRYNSEWLKGLNLNSIIDLM 156

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           GS  +V++ML+ E    R   +  +S  EF Y +LQ YD V +       +++GG+DQ  
Sbjct: 157 GS-ATVSQMLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQ----SDIELGGTDQKF 211

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           NI  G DL    K    F +  P+LT      KM K+    + L ++  S Y+       
Sbjct: 212 NIAIGRDLQRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVALTEDPLSMYS---KLEK 268

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  + ++ + LT L +S ++           E ++ +A E+TT+ HG EEA KA +  
Sbjct: 269 VPDNIIPTYFELLTELDLSFLENS------NPRELQRRMAFEVTTLFHGAEEALKAQSNC 322

Query: 324 ME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            +           +P IS+   EV   +    L+       S++E++R +K   +KI++ 
Sbjct: 323 EKLFLGHKEKVGEIPEISLK--EVVFPVKFFYLLSALKLFKSSSESKRSIKGGGVKIDSQ 380

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            + N  L    ++        L  GKK
Sbjct: 381 KVINPDLVFNSKNDLEGK--ILQIGKK 405


>gi|78184144|ref|YP_376579.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|115305826|sp|Q3AZE2|SYY_SYNS9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78168438|gb|ABB25535.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 415

 Score =  260 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 149/406 (36%), Gaps = 27/406 (6%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + Q    R          +   +G D T S++H GH      L   Q  GH  + ++G  
Sbjct: 28  VDQSLAARLAAAEAEGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHIAVLIIGDF 87

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETW 131
           T+ IGDP+ +  +R  +   ++  N               T   D           N  W
Sbjct: 88  TARIGDPTGKSATRVQLSKNDVAVNASTYLRQLGQDQPKETALLDFETPGRLEVRYNSEW 147

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +     +  +    +V +ML+ E   +R      ++  EF Y +LQ YD V +    
Sbjct: 148 LEGMDL-PAVIGLLGTGTVGQMLAKEDFSNRYNSGTPIALHEFLYPLLQGYDSVAV---- 202

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N+  G DL         F L  P+L       KM KTL   + L  +
Sbjct: 203 NADVELGGTDQKFNVAMGRDLQRHFGRGTQFGLLLPILVGLDGAQKMSKTLGNTVGLEDD 262

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S Y+       + D  +  +   LT L +  +            E +K +A  +T   
Sbjct: 263 PLSMYS---KLEKVGDTAINDYVTLLTDLNVEALPE-------NPREKQKAMALAVTATR 312

Query: 311 HGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           HG + A KA   A          S  +P  S+    V+       L+   G   S++EAR
Sbjct: 313 HGTDAAAKAQLDAGNLVGGAGDASADVPEASL--LAVNFPAKAFYLMSAVGICASSSEAR 370

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +K  A +++   I++   +             L  GKK      
Sbjct: 371 RQIKGGAARLDGEKITDPNQEFASAAELDGR--VLQLGKKTFRRLT 414


>gi|260436696|ref|ZP_05790666.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414570|gb|EEX07866.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 400

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 91/395 (23%), Positives = 153/395 (38%), Gaps = 29/395 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S++H GH      L   Q  GHK + ++G  T+ IGDP+ +  +R
Sbjct: 27  EGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHKAVLIIGDFTARIGDPTGKCATR 86

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETWLCSIKYIDLLREIG 145
             +  +++  N               T   D           N  WL  +     +  + 
Sbjct: 87  VQLTKEQVAANASTYLRQLGQDQPKETALLDFETPGRLEVRYNSEWLEGMDL-PAVIGLL 145

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              +V +ML+ +    R      ++  EF Y +LQ +D V +    +  +++GG+DQ  N
Sbjct: 146 GTGTVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGFDSVAV----NADVELGGTDQKFN 201

Query: 206 IICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +  G DL         F L  P+L       KM K+L   + L ++  S Y+       +
Sbjct: 202 VAMGRDLQRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEEDPLSMYS---KLEKV 258

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            DA +  +   LT L ++ +            E +K +A  +T   HG E A+KA + A 
Sbjct: 259 GDAAIDDYVTLLTDLHLTSLPE-------NPREKQKAMALAVTASRHGIEAAQKAQSDAA 311

Query: 325 ECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                       +P  S++  EV+       L    G   S++EARR +K  A ++    
Sbjct: 312 TLVGGSGDAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGEK 369

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           I++   +             L  GKK      L G
Sbjct: 370 ITDPNQEFASAAELEGK--VLQLGKKTFR--RLVG 400


>gi|322380907|ref|ZP_08054985.1| tyrosyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146675|gb|EFX41497.1| tyrosyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 401

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 189/415 (45%), Gaps = 35/415 (8%)

Query: 13  SERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             RG          L  L           +A  G+D TA  LH GH+  L  L  LQ+ G
Sbjct: 12  ITRGMGE-CIGLEYLQSLVERFYNTSNRFSAKAGFDPTAPDLHLGHMVLLNKLATLQRHG 70

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            +   ++G  T+ IGDPS + E+R+++  +E+ EN +  K      +          +  
Sbjct: 71  ARVQFVIGDFTATIGDPSGKSETRKILSFEEVLENAKTYKEQVFKILDPDL----TDVCF 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL      + L  + S FSV RML  +    R K  + +S +EF Y +LQ YD V L
Sbjct: 127 NSAWL-KPLGAEGLLVLTSKFSVARMLERDDFEKRYKENKPISVVEFMYPLLQGYDSVAL 185

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
               +C +++GG+DQ  N++ G  L      + +   LT PLL       KM K+L   I
Sbjct: 186 ----ECDIELGGNDQKFNLLVGRFLQRSYGLSKEQSVLTMPLLEGLDGVHKMSKSLGNYI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            ++++   P N +    +I D  +  + + L+     +I  + +   +        K+ +
Sbjct: 242 GVSED---PKNMYAKLLSISDDLMWRYYELLSAQTSQQIALLKQGVQEGKLHPKTIKEEL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EITT +H  ++A++A           I  + +P+  + + + S G+ + TL+  AG +
Sbjct: 299 ALEITTRLHSLKQAQEAKAEFD-----RISHKQIPS-ELVQMQFSEGVWIGTLLKSAGLS 352

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ST++ARR +K+  ++IN  +I +E+ Q         G+  +  GK+  I   + 
Sbjct: 353 PSTSQARRDIKAGGVRINQVVILDEQYQFSK------GSYVVQVGKRKFIRAIIA 401


>gi|91070372|gb|ABE11286.1| tyrosyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HF10-88H9]
          Length = 412

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 95/400 (23%), Positives = 175/400 (43%), Gaps = 28/400 (7%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           +Q  +        +   +   +G D T +++H GH      L   Q  GH  + ++G  T
Sbjct: 25  NQTFSEIIDHAKKNNKKLRVKLGIDPTGTNIHLGHSILFKKLRAFQDNGHIAVLIIGDFT 84

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGI-------FSSFIKYGTGKTDALMLNNETW 131
           + IGDP+ ++++R  +  Q++++N +              S + + +      +  N  W
Sbjct: 85  AQIGDPTGKNKTRVQLSEQQVKDNAKTYLTQLGMGKPAIESILDFDSKD-RIEIRYNSEW 143

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +    ++  +GS  +V++ML+ E    R   +  +S  EF Y +LQ YD V +    
Sbjct: 144 LKGLNLNSIIDLMGS-STVSQMLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQ--- 199

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  NI  G DL    K    F +  P+LT      KM K+    + L ++
Sbjct: 200 -SDIELGGTDQKFNIAIGRDLQRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVGLTED 258

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S Y+       + D  + ++ + LT L +S ++           E ++ +A E+TT+ 
Sbjct: 259 PLSMYS---KLEKVPDNIIPTYFELLTELDLSFLENS------NPRELQRRMALEVTTLF 309

Query: 311 HGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           HG EEA KA +   +           +P IS+   EV   +    L+       S++E++
Sbjct: 310 HGAEEALKAQSNCEKLFLGQKEKVGEIPDISLK--EVVFPVKFFYLLSALKLFKSSSESK 367

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           R +K   +KI++  + N  L    ++        L  GKK
Sbjct: 368 RSIKGGGVKIDSQKVVNPDLVFNSKNDLEGK--ILQIGKK 405


>gi|319653466|ref|ZP_08007566.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317394950|gb|EFV75688.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 418

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 169/412 (41%), Gaps = 29/412 (7%)

Query: 15  RGFIHQISNPRELDI-----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           R  +  I    EL       +     +   +G D +A  +H GH   L  L   Q  GH 
Sbjct: 24  RNGVQDILPEAELKNKIAKSIFQNQPLKIKLGLDPSAPDVHIGHTVVLNKLKQFQDNGHI 83

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++G  T  IGDP+ +  +R  +  +E++ N +     F   +          +  N 
Sbjct: 84  IQLIIGDFTGKIGDPTGKSAARNQLTDEEVKRNAKTYFEQFCKVLD----MNKVDLHYNS 139

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  ++  D++R   S  +V R+L       RL   + +S  EF Y ++Q YD V L  
Sbjct: 140 AWLSDLQLEDVIRLSAS-ITVARLLERNDFSERLSTGKPISLHEFFYPLMQGYDSVVL-- 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G  L E  +  K   +  PLL       KM K+ +  I ++
Sbjct: 197 --ESDIELGGNDQHFNVLMGRHLQEHFQKEKQVVILMPLLEGLDGKEKMSKSKNNYIGVD 254

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           ++   P N +    +I D  +  +    T LP+ E  ++A+          +AK ++   
Sbjct: 255 ED---PNNMYGKTMSIPDELIPKYFNLATDLPVKEKQQIAEGLENGTLHPRDAKMLLGKT 311

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I  M HG  EA+KA       F        +P            + +  L+   G  +S 
Sbjct: 312 IVRMYHGTGEADKAELHFKTIFQKGAIPDEIPEAEWKG---EGEVLITDLLAGLGLLSSK 368

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EAR+ +    I++N   + + ++ +K+ D      + L  GK+  +   L 
Sbjct: 369 TEARKMIAGGGIRLNGQKVGDVQMLVKITD-----GLVLQAGKRKFVKLRLS 415


>gi|322378582|ref|ZP_08053022.1| tyrosyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148990|gb|EFX43450.1| tyrosyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 401

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 188/415 (45%), Gaps = 35/415 (8%)

Query: 13  SERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             RG          L  L           +A  G+D TA  LH GH+  L  L  LQ+ G
Sbjct: 12  ITRGMGE-CIGLEYLQSLVERFYNTSNRFSAKAGFDPTAPDLHLGHMVLLNKLATLQRHG 70

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            +   ++G  T+ IGDPS + E+R+++  +E+ EN +  K      +          +  
Sbjct: 71  ARVQFVIGDFTATIGDPSGKSETRKILSFEEVLENAKTYKEQVFKILDPDL----TDVCF 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL      + L  + S FSV RML  +    R K  + +S +EF Y +LQ YD V L
Sbjct: 127 NSAWL-KPLGAEGLLVLTSKFSVARMLERDDFEKRYKENKPISVVEFMYPLLQGYDSVAL 185

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTLSGAI 245
               +C +++GG+DQ  N++ G  L      + +   LT PLL       KM K+L   I
Sbjct: 186 ----ECDIELGGNDQKFNLLVGRFLQRSYGLSKEQSVLTMPLLEGLDGVHKMSKSLGNYI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            ++++   P N +    +I D  +  + + L+     +I  + +   +        K+ +
Sbjct: 242 GVSED---PKNMYAKLLSISDDLMWRYYELLSAQTSQQIALLKQGVQEGKLHPKTIKEEL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI T +H  ++A++A           I  + +P+  + + + S G+ + TL+  AG +
Sbjct: 299 ALEIITRLHSLKQAQEAKAEFD-----RISHKQIPS-ELVQMQFSEGVWIGTLLKSAGLS 352

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ST++ARR +K+  ++IN  +I +E+ Q         G+  +  GK+  I   + 
Sbjct: 353 PSTSQARRDIKAGGVRINQVVILDEQYQFSK------GSYVVQVGKRKFIRAIIA 401


>gi|78213618|ref|YP_382397.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|115305827|sp|Q3AHU0|SYY_SYNSC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78198077|gb|ABB35842.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 415

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 150/391 (38%), Gaps = 27/391 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 42  EGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDGGHTAVLIIGDFTARIGDPTGKSATR 101

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETWLCSIKYIDLLREIG 145
             +  +++  N               T   D           N  WL  +     +  + 
Sbjct: 102 VQLSKEQVAANASTYLRQLGQDQPKETALLDFETPGRLEVRYNSEWLEGMDL-PAVIGLL 160

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              +V +ML+ +    R      ++  EF Y +LQ YD V +    +  +++GG+DQ  N
Sbjct: 161 GTGTVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----NADVELGGTDQKFN 216

Query: 206 IICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +  G DL         F L  P+L       KM K+L   + L ++  S Y+       +
Sbjct: 217 VAMGRDLQRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEEDPLSMYS---KLEKV 273

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            DA +  +   LT L ++ +            E +K +A  +T   HG E A+KA + A 
Sbjct: 274 GDAAIDDYVTLLTDLDLASL-------PDNPREKQKAMALAVTASRHGIEAAQKAQSDAA 326

Query: 325 ECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                       +P  S++  EV+       L    G   S++EARR +K  A ++    
Sbjct: 327 TLVGGSGDAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGEK 384

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           I++   +             L  GKK     
Sbjct: 385 ITDPNQEFTSAAELEGK--VLQLGKKTFRRL 413


>gi|154147934|ref|YP_001406831.1| tyrosyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153803943|gb|ABS50950.1| tyrosyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 403

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 182/421 (43%), Gaps = 35/421 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +  L  L  RG I +I     ++ L              IG D TAS LH GH   L  L
Sbjct: 7   NSILKEL-NRG-ISEIIGIERVEELIKNYYEKGNRFYVKIGMDPTASDLHLGHSVVLKKL 64

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            +LQ+ G     L+G  T+ IGDP+ + E+R+ +    + +N +  +      +      
Sbjct: 65  AFLQQHGAIVQFLIGDFTAQIGDPTGKSETRKKLDRNTVLKNAKTYQDQVFKILDKD--- 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +L N  WL  +    ++  + S FSV RML  +   +R K EQ +S  EF Y +LQ
Sbjct: 122 -RTNILFNSEWLNRLGATGMIE-LASTFSVARMLERDDFTNRFKNEQPISISEFLYPLLQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTT-ASGTKMG 238
            YD V +       +++GG+DQ  N++ G  L        +   +  PLL       KM 
Sbjct: 180 GYDSVCMK----SDIEIGGTDQKFNLLMGRQLQRTYNVGKEQAVMMMPLLVGLDGVNKMS 235

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EI 295
           K+L   I + +     Y       +I+D  + S+ + L++  + +I+   KL        
Sbjct: 236 KSLGNYIGITENANDMYA---KILSINDELMWSWYELLSSYSLDDINLFKKLVQDGELHP 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             AK+ +A +I T  +    A KA     +    +     +   +IS         ++  
Sbjct: 293 KVAKESLAMDIVTKFYDENSALKAKEEFDKVHVNNEAPSEIKEFTISS-----PAWIVKA 347

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++    A S+++ARR ++SNA+ ++ + I++E+LQ+   ++       L  GKK      
Sbjct: 348 LMSCKLAVSSSDARRLIRSNAVSVDKNKIADEQLQLSSGNYF------LQVGKKKFAKLI 401

Query: 416 L 416
           +
Sbjct: 402 V 402


>gi|295657588|ref|XP_002789361.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226283881|gb|EEH39447.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 592

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 122/479 (25%), Positives = 209/479 (43%), Gaps = 66/479 (13%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++++  +   L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 82  RKSFLELMEERGLVNKVVGDRDALNKMWTERRVGVYAGVDPTAPSLHIGHMLPFMVLAWA 141

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G + + L+GG TS IGDP+ R++ R        +EN+  +     +          K
Sbjct: 142 YVHGIRAVFLLGGSTSQIGDPTDREDPRAKQARVTRKENMVNMHLQLKTLGMSIERYGAK 201

Query: 116 YGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G          ++NN TW     ++++++ +G    +  ML  ++V++RL+  + +S  
Sbjct: 202 HGYAYEPIWRRAIVNNNTWWLKEPFMEVMKTMGESARLGPMLGRDTVKNRLQSGKGMSLA 261

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL----------- 221
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  GID  + L                
Sbjct: 262 EFTYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGIDATKSLMKADQDYWRKHAPKPE 321

Query: 222 -------FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                     T+PLLTT SG K GKT   A+WL+K+MT  ++ +Q++  + D +V  + K
Sbjct: 322 DREILEPMGFTTPLLTTPSGEKFGKTAGNAVWLDKDMTPTFDLYQFFIRVPDENVEQYLK 381

Query: 275 RLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI- 331
             T LP+  I  +     ++     A+  +A+E   ++ G  EA +A       F   I 
Sbjct: 382 YFTFLPIPAIKEIMVQHMEDPSKRVAQHKLASEFVELMRGPAEAAQAEKDHRSLFGGQIS 441

Query: 332 ---HSQHMPTISISKDEVSR----------------GMGLLTLIVKAGFATSTNEARRHL 372
                +  P   I+  E S                 G     ++  AG A+S  EA R +
Sbjct: 442 TAPEMEARPKRDINLSETSPFNAPSPHVTLPRSLVVGQFFHKVLWSAGLASSKAEAMRLI 501

Query: 373 KSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
             N   +    ++    ++KL              +       + L  GK    I  + 
Sbjct: 502 LHNGAAVASRSDSKATMDDKLSYVPIKTWNKDATEKFIIDDSLLILRIGKWKVKIVKIV 560


>gi|325955545|ref|YP_004239205.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438163|gb|ADX68627.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 401

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 167/415 (40%), Gaps = 30/415 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  L E   +  I     L+            +   +G+D TA  LH GH   L  L   
Sbjct: 2   IEELKEN--VEIILPENGLEQKLKQAKEENRKLIIKLGFDPTAPDLHLGHAVVLKKLKQF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ + L+G  T+ IGDP+ ++++R+ + ++E+Q N +      S  I         
Sbjct: 60  QDLGHQVVILVGSFTARIGDPTGKNKARKPLSAEEVQHNAQTYINQLSKIID----VEKT 115

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N TWL  + +   + E+ S  +V +++       R      ++  E  Y ILQ YD
Sbjct: 116 KIVYNSTWLDGLSF-SAIIELLSRVTVAQLMHRNDFNKRFTENTPIAMHELVYPILQGYD 174

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
             ++       ++MGG+DQ  N   G  L E  +      +  PLL       KM K+++
Sbjct: 175 STQIK----ADIEMGGTDQLFNCTMGRQLQESYEVSPQIVMCMPLLRGLDGKEKMSKSMN 230

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKK 300
             I L      P   +    +I D  +  +    T   + E +++        N  + KK
Sbjct: 231 NIIGLT---DEPNEMFGKTMSIPDDLLEEYINLATDFSIEEKEQLKNRIASGDNPMKIKK 287

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-ISISKDEVSRG--MGLLTLIV 357
           I+A  I T  H  E AE A       F      + +   + I+  +      M LL L  
Sbjct: 288 IVAKNIITQYHNAEAAEGAEVFFSTQFQNKNFDEKVFEPVKINTLQNIENNRMSLLDLCH 347

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +    +S +  RR ++   I+I+N   ++    I L+       +K+  GK+   
Sbjct: 348 QLKKDSSRSAVRRLIEGGGIQIDNEKRTDANESIVLK-----NGMKIKIGKRTFY 397


>gi|150865466|ref|XP_001384692.2| tyrosyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149386722|gb|ABN66663.2| tyrosyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 552

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 125/463 (26%), Positives = 207/463 (44%), Gaps = 52/463 (11%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLML 59
           P      +  L  R  +  I++    D+    S      Y G D TA SLH G+L  LM+
Sbjct: 91  PDLDMPLVGHLQSRYLVESITDDALFDLTSPESTKKFKLYCGADPTAESLHLGNLLPLMV 150

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L      GH  + L+GG T  +GDPS R   R  +  +E ++N+ KI+    +F++ G  
Sbjct: 151 LLHFNLRGHDVVGLVGGATGAVGDPSGRTTERSQIEDKEREDNVSKIQKQLVTFLENGVA 210

Query: 120 KTDALML-----------NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
              +              NN +W  SI  ++ L + G    V+ ML+ +S++SRLK +  
Sbjct: 211 YAKSRNYPIAGEGRILTANNASWWSSIGMLEFLAKYGRHIRVSSMLARDSIQSRLKDQHG 270

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER---------LKTP 219
           L F EF Y ILQAYDF  + +     +Q+GG+DQWGNI  GIDL  R         ++  
Sbjct: 271 LGFNEFTYQILQAYDFWHMFREDGVNMQIGGNDQWGNITAGIDLISRLQRHFGKEGVEPQ 330

Query: 220 KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
             + +T PLLT+ +G K GK+   A++++++ T+PY  +QY+ N  D  V    K LT L
Sbjct: 331 SAYGMTVPLLTSPTGEKFGKSAGNAVFIDEKYTTPYQMYQYFINSPDDMVAKLLKTLTLL 390

Query: 280 PMSEIDRMAKLQGKEI---NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           P+S ID     + +       A++I+A E+  ++HG    E+ A      F       + 
Sbjct: 391 PLSIIDGYILPKHESDPGLRIAQRILAREVVDLIHGEGVGEEMAYITSFLFPTPDQPFN- 449

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFA-------------------TSTNEARRHLKSNAI 377
              ++S D + +      ++V   F+                    S  E ++ +KS  I
Sbjct: 450 --DTVSADRLIQNFRRSGILVNLKFSEIENIDDLRMSSLLAQITNKSRREVKQLIKSGGI 507

Query: 378 KINNSI--ISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICH 415
            +        + +  +   +         + +  GK+N+ +  
Sbjct: 508 YMGLERDQFEDPEDVVLFDRDNHLIDGKLLLVRVGKQNYYVVE 550


>gi|159903924|ref|YP_001551268.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159889100|gb|ABX09314.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 415

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 165/405 (40%), Gaps = 27/405 (6%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           Q    R ++   +Q  +   +G D T S +H GH      L   Q  GH  + ++G  T+
Sbjct: 30  QSLARRLIESEQNQSPLRIKLGIDPTGSEIHLGHSILFRKLRSFQDAGHIAVLIIGDFTA 89

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIF------SSFIKYGTGKTDALMLNNETWLC 133
            IGDP+ + ++R  + S+E+++N               + +          +  N  WL 
Sbjct: 90  RIGDPTGKSKTRNQLTSEEVEKNAITYLEQLGYGKSSETSLLDFETPGRIEIRRNSEWLS 149

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               +  + ++ S  +V +ML+ E   +R      +S  E  Y +LQ YD V +      
Sbjct: 150 DFD-MSKIIDLLSHATVGQMLAKEDFANRYNSGTPISLHELLYPLLQGYDSVAVK----A 204

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N+  G D+         F L  P+L       KM KTL+  + L  +  
Sbjct: 205 DVELGGTDQKFNVAMGRDIQRLFDQRPQFGLLLPILVGLDGVQKMSKTLANTVALKDDAL 264

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
           S Y+       I D  V S+   LT L  +++          + E +K++A  +T   HG
Sbjct: 265 SMYS---KLEKIPDDLVNSYLTLLTNLEQTDM-------PSNLREKQKLMALNVTANFHG 314

Query: 313 REEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
              A  A   A +    +      +P +SI K  V+  +    L+   G   S++EARR 
Sbjct: 315 MPAAIAAQEDASKLVAGLQDSLSDVPEVSIKK--VNLPVKAFYLLSAIGLCKSSSEARRQ 372

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +   A++++   I +  L+             +  GK+      +
Sbjct: 373 ILGGAVRLDGKKILDPNLEFDNDSELVGK--VVQLGKRTFRRLSI 415


>gi|91070497|gb|ABE11406.1| tyrosyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HOT0M-1A11]
          Length = 412

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/399 (22%), Positives = 174/399 (43%), Gaps = 28/399 (7%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           Q  +        +   +   +G D T + +H GH      L   Q  GH  + ++G  T+
Sbjct: 26  QTFSEILDHAKRNNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTA 85

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWL 132
            IGDP+ ++++R  +  +++++N +              S + + +      +  N  WL
Sbjct: 86  QIGDPTGKNKTRLQLSEKQVKDNAKTYLTQLGMGKPANESILDFDSKD-RIEIRYNSEWL 144

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +    ++  +GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +     
Sbjct: 145 KGLNLNSIIELMGS-ATVSQMLAKEEFNKRYTSQIPIALHEFLYPLLQGYDSVVVR---- 199

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI  G DL    K    F +  P+LT   G  KM K+    + L  + 
Sbjct: 200 SDIELGGTDQKFNIAIGRDLQRYFKQEPQFGVLLPILTGLDGFKKMSKSEFNTVGLTDDP 259

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            S Y+       + D  + ++ + LT L +S ++ +         E ++ +A E+TT+ H
Sbjct: 260 LSMYS---KLEKVPDNIIPTYFELLTELDLSFLENL------NPRELQRRMALEVTTLFH 310

Query: 312 GREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           G +EA +A +   +           +P IS+   E+   +    L+       S++E++R
Sbjct: 311 GAKEALEAQSNCEKLFLGYKEKVGEVPEISLK--EIVFPVKFFYLLSALKLFKSSSESKR 368

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +K   +KI++  + N  L    ++        L  GKK
Sbjct: 369 SIKGGGVKIDSQKVINPDLVFDSKNDLEGK--ILQIGKK 405


>gi|116071219|ref|ZP_01468488.1| tyrosyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116066624|gb|EAU72381.1| tyrosyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 415

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 151/406 (37%), Gaps = 27/406 (6%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + Q    R          +   +G D T S++H GH      L   Q  GH  + ++G  
Sbjct: 28  VDQSLAARLAAAEAEGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDF 87

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETW 131
           T+ IGDP+ +  +R  +   ++  N               T   D           N  W
Sbjct: 88  TARIGDPTGKSATRVQLSKNDVAVNASTYLRQLGQDQPKATALLDFETPGRLEVRYNSEW 147

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +     +  +    +V +ML+ E   +R      ++  EF Y +LQ YD V +    
Sbjct: 148 LEGMDL-PAVIGLLGTGTVGQMLAKEDFSNRYSSGTPIALHEFLYPLLQGYDSVAV---- 202

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N+  G DL         F L  P+L       KM KTL   + L ++
Sbjct: 203 NADVELGGTDQKFNVAMGRDLQRHFGRGTQFGLLLPILVGLDGAQKMSKTLGNTVGLEED 262

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S Y+       + DA +  +   LT L +  +            E +K +A  +T   
Sbjct: 263 PLSMYS---KLEKVGDAAINDYVTLLTDLNVEVLPE-------NPREKQKAMALAVTATR 312

Query: 311 HGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           HG + A KA   A          S  +P  S+    V+       L+   G   S++EAR
Sbjct: 313 HGMDAAAKAQLDAANLVGGAGDASADVPEASL--LSVNFPAKAFYLMSAVGICASSSEAR 370

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +K  A +++   I++   +             L  GKK      
Sbjct: 371 RQIKGGAARLDGDKITDPNQEFATAAELDGR--VLQVGKKTFRRLT 414


>gi|294657922|ref|XP_002770518.1| DEHA2E21318p [Debaryomyces hansenii CBS767]
 gi|199433054|emb|CAR65860.1| DEHA2E21318p [Debaryomyces hansenii]
          Length = 523

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 132/457 (28%), Positives = 202/457 (44%), Gaps = 49/457 (10%)

Query: 7   DFLSILSERGFIHQISNPRELD--ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +  L  R  +  I++          S+     Y G D TA SLH G+L  LM+L    
Sbjct: 66  SLVGHLQSRYLVESITHDDLFKWTDPSSEKRFKLYCGADPTAESLHLGNLLPLMVLLHFN 125

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  + L+GG T  +GDPS R   R  +  ++  +N+ +I+   S+F+K G     + 
Sbjct: 126 LRGHDVVGLVGGATGAVGDPSGRTTERTQLAEEKRLDNVNRIQNQLSNFLKQGVEYAKSR 185

Query: 125 ML-----------NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                        NN  W  SIK +D L   G    V+ ML  +S++SRLK E  L F E
Sbjct: 186 NFPIQKQGQIFTENNAKWWESIKILDFLSTYGKHIRVSAMLGRDSIQSRLKSEHGLGFNE 245

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-------------ERLKTPK 220
           F+Y +LQAYDF  L KN    LQ+GG+DQWGNI  G+DL              +      
Sbjct: 246 FSYQVLQAYDFWHLFKNEKVNLQIGGNDQWGNITAGVDLISRLQKHFNRVSKPKDKIEEP 305

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
            F +T PLLTT +G K GK+   AI++N+++T+PY  +QY+ N  D  V    K  T LP
Sbjct: 306 SFGMTVPLLTTPTGEKFGKSAGNAIFINEKLTTPYQLYQYFINTPDEIVAKLLKVFTILP 365

Query: 281 MSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT--AAMECFDMSIHSQHM 336
           M+ I++      +   I  A++I+A E+T ++HG    +K A   + +           +
Sbjct: 366 MATIEKIVQKHNEDPGIRAAQRILAREVTDLIHGNGMGDKMAYVTSFLFPTPDQPFIDDI 425

Query: 337 PTISISKDEVSRGM--------------GLLTLIVKAGFATSTNEARRHLKSNAIKIN-- 380
               +       G+               L TL+ K     S  E +  + +  I +   
Sbjct: 426 SANKLISVFEKSGILVRFKFDDFNIDDLKLSTLLAKV-MKKSKTETKNLIAAGGIYLGLD 484

Query: 381 -NSIISNEKLQI-KLQDFDSTGNIKLSFGKKNHIICH 415
            N  I  E + +           + +  GK+N+ +  
Sbjct: 485 RNQHIDPEDVVLFDKDHLIDGKLLLVRAGKQNYYVVE 521


>gi|196000568|ref|XP_002110152.1| hypothetical protein TRIADDRAFT_21492 [Trichoplax adhaerens]
 gi|190588276|gb|EDV28318.1| hypothetical protein TRIADDRAFT_21492 [Trichoplax adhaerens]
          Length = 416

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 118/400 (29%), Positives = 191/400 (47%), Gaps = 32/400 (8%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           +AY G D TA SLH G+L  +M L  L++ GH P  ++GG T +IGDPS R + R  +  
Sbjct: 6   SAYAGIDPTAESLHVGNLVTIMTLLHLRRAGHIPYFVIGGSTGLIGDPSGRLKERDPLSI 65

Query: 97  QEIQENIEKIKGIFSSFIKYGTGK--------------TDALMLNNETWLCSIKYIDLLR 142
             +  N+++I+   S  +                       ++LNN TW  +   ++ L 
Sbjct: 66  NTVTHNVQEIQCQISDLLHNDFNMWSDKDQLLFKQSRNFGDVILNNATWYENFNIVNFLS 125

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +G  F +  MLS +SV+ RL   + +   EF Y + QAYDF  +    +C +Q+GGSDQ
Sbjct: 126 SVGRHFRMGAMLSRDSVKQRLNSPEGMCLTEFFYQVFQAYDFQRMCAERNCHIQVGGSDQ 185

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           WGNI+ G +   ++   ++  LT PLLT ASG K+GK+L  AIWL++  TS Y F+QY+ 
Sbjct: 186 WGNIVAGCEFIHKVDGKRVHGLTVPLLTNASGEKLGKSLGNAIWLSRAKTSLYEFYQYFM 245

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHG-------- 312
             +DADV  F K  T +P+++I  +        E     KI+A E+  +VHG        
Sbjct: 246 RTEDADVEKFLKIFTFIPVNDIRNIVARHLEKPEERYGTKILANEVARLVHGGNKHTILR 305

Query: 313 ----REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
                               +    + +P I +  D   +   +  L +  G   S N+ 
Sbjct: 306 FFYYYFYLSLYIFIDFLANKLQQILRDVPNIQLKWD---KSRNMAELALNCGAVPSFNQG 362

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFG 407
           R+ ++S    +N++ I++ K +++            +  G
Sbjct: 363 RKLIESGGFYVNDTKITDYKAKVESDIRRLDGRITVVRTG 402


>gi|220906293|ref|YP_002481604.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862904|gb|ACL43243.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 403

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 97/394 (24%), Positives = 167/394 (42%), Gaps = 23/394 (5%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
            L +  +   +    G D T S +H GH   +  L   Q  GH  + ++G  T+ IGDP+
Sbjct: 30  ALRLAQTDRPLRVKFGIDPTGSEVHLGHSIPIRKLRAFQDAGHVAVLIIGDFTARIGDPT 89

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
            + E RR +   E+  N++         + + T     +  N  TWL  +        + 
Sbjct: 90  GKSEVRRQLSEAEVAANVKTYLEQIRPILDFDTPDRLEIHYN-STWLAKLDLGQTAELLA 148

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           +  +V +ML+ E    R  +E+ +   EF Y ++Q YD V +       +++GG+DQ  N
Sbjct: 149 TM-TVGQMLAKEGFDLRFSKEEPIYLHEFLYPLMQGYDSVAVR----SDVELGGTDQKFN 203

Query: 206 IICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           I  G DL         F L  P+L  T    KM K+L+  + L +   S Y+       I
Sbjct: 204 IAVGRDLQRHFGLSPQFGLLMPILLGTDGAQKMSKSLNNYVGLQENPISMYS---KLEKI 260

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE--AEKAATA 322
            D  + S+ + LT LP++++            + +K++  EIT   HG       +A  A
Sbjct: 261 PDGVIESYFELLTDLPLADLPE-------NPRDRQKLLGVEITRQFHGEAVALQTQAELA 313

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           AM        ++ +P  S++  +    + L  LI  +G  +S++EARR ++   +K++  
Sbjct: 314 AMVMQGQMGQAELVPEFSLTGQKF--PVPLFYLISASGLVSSSSEARRQIQGGGVKLDGK 371

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            I      I            L  GKK  +   +
Sbjct: 372 RIEQVDYAIAAPTELEGK--VLQVGKKKFVRFIV 403


>gi|260800994|ref|XP_002595381.1| hypothetical protein BRAFLDRAFT_119005 [Branchiostoma floridae]
 gi|229280627|gb|EEN51393.1| hypothetical protein BRAFLDRAFT_119005 [Branchiostoma floridae]
          Length = 541

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 180/344 (52%), Gaps = 13/344 (3%)

Query: 5   KSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           K++ L  L ERG    I      EL  L   G    Y G+D TA SLH G+L  ++ L  
Sbjct: 39  KTNIL-TLHERGIFVDIFPEASIELPKLLQSGPQCVYCGFDPTADSLHIGNLLAIIGLLH 97

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-- 120
            Q+ GH  I+L+GG T+ IGDPS R + R  +   ++Q NI  I+       K       
Sbjct: 98  CQRAGHNTIALIGGATARIGDPSGRSKEREELDLDQLQTNIRGIESTLQRVCKNHQQDIW 157

Query: 121 ------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                     + NN +W      ++ +  +G  F +  ML   SV++RLK  + +S  EF
Sbjct: 158 RSPKELPPLRIENNSSWYRQQSVVEFMSTVGRHFRMGTMLGRTSVQTRLKSAEGMSLTEF 217

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
            Y + QAYDF+ L + Y C +Q+GGSDQ GN++ G DL  ++   +++A+T PL+TT SG
Sbjct: 218 TYQMFQAYDFLHLHREYRCLIQLGGSDQMGNMMSGHDLVRKVTGKEVYAITVPLVTTTSG 277

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--G 292
            K+GKT   A+WL+++ TSP+  +Q++    D+ + S+ K  T L M+EI  + +     
Sbjct: 278 EKLGKTAGNAVWLSRDKTSPFELYQFFIRQPDSIMESYLKLFTFLSMTEIADIMRKHSNH 337

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            E   A+K +A ++T +VHG    + A       +D +++   +
Sbjct: 338 PENRLAQKKLAEQVTILVHGVSGLDFALCCRPCIYDCTVNIMTI 381



 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 8/82 (9%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE--ARRHLKSNAIKINNSIIS 385
           +M +     PT  +    +  G+ LL ++VKA       E      +    + INN   +
Sbjct: 453 EMKLLFSEAPTTEMV---LEPGLSLLDVLVKAKALP--GEVTGWHIIADGGVWINNVRQT 507

Query: 386 NEKLQIKLQ-DFDSTGNIKLSF 406
           + +  +             +  
Sbjct: 508 DPRHVVVPSLHILDNNISIVRI 529


>gi|238583408|ref|XP_002390231.1| hypothetical protein MPER_10524 [Moniliophthora perniciosa FA553]
 gi|215453410|gb|EEB91161.1| hypothetical protein MPER_10524 [Moniliophthora perniciosa FA553]
          Length = 480

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 115/417 (27%), Positives = 191/417 (45%), Gaps = 43/417 (10%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ERGFI Q + P EL    +      Y G D T  SLH GHL   M L   Q  G
Sbjct: 93  LYETLTERGFIQQATRPDELKNALASSPQIVYAGIDPTDRSLHIGHLLPFMCLLHFQLQG 152

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+GG T ++GDPS R   R     + ++ N+  +      F ++ +    + +  
Sbjct: 153 HGIIPLIGGATGLVGDPSGRKTEREPTDVKLVESNVLALSNSIKHFFRHASQYAQSRVPF 212

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI---LQAYDF 184
           +     ++                       V+S L   +  + LEF  ++    +AYDF
Sbjct: 213 SFEKEPTLGL--------------------EVKSNLVWHKDFNMLEFLRIVGIHARAYDF 252

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-----LFALTSPLLTTASGTKMGK 239
             L +++ C +Q+GGSDQWGNI+ G++L  RLK  +      F +T+PLLTTASG K GK
Sbjct: 253 YYLHEHHQCTIQIGGSDQWGNILAGLELIGRLKHSETDGGSAFGITTPLLTTASGEKFGK 312

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +   A+WL+ ++TS ++F+QY+  ++DADV  + K  T LP+SEI  +        E   
Sbjct: 313 SAGNAVWLDPQLTSVFDFYQYFLKVEDADVEKYLKLFTLLPLSEIREIVFSHKMAPEKRI 372

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           A++ +A E+T      +   +A              +  P +     E      ++ L  
Sbjct: 373 AQRRLADEVTDQQLDAQSLIQA-------------FESDPRLKWCSKEELTSTSVMKLAS 419

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + G  +ST+ AR+ +++  + +N+  +      ++ +         +  GK   +I 
Sbjct: 420 RYGLVSSTSAARQLIQARGLYVNDKTVPEIHFTMQEEQLLDGRIAVIRAGKDKVLIL 476


>gi|320102336|ref|YP_004177927.1| tyrosyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319749618|gb|ADV61378.1| tyrosyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 424

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 30/416 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +  RG +  +    EL     +       +    G D T  ++H GH   L  L   Q  
Sbjct: 29  ILRRG-VEAVVPEEELRRKLERSVAERRPLRVKYGIDPTGINVHLGHTVPLRKLRQFQDL 87

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  + ++G  T+++GDPS RDE+R  +   +++ N           I      + A + 
Sbjct: 88  GHTAVIIIGNSTALVGDPSGRDETRARLTRDQVEANARDYLAQVGRIIDL----SRAEVH 143

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  +  ++D+L ++    +V++++  +    RLK  +++   E  Y ++Q +D VE
Sbjct: 144 HNGDWFNTWTFLDVL-DLARRVTVSQLIERDDFAKRLKAGKAVFLHECLYPLMQGWDSVE 202

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAI 245
           +       +++GGS+Q  +++   DL +        ALT P+L  T    +MGK+L   I
Sbjct: 203 VK----ADVELGGSEQLFSLMLARDLQKEQGLEPQVALTMPILVGTDGTRRMGKSLGNDI 258

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            +++   SP N +    +I D  +  +   LT LP  E+DR+         +AK+++A  
Sbjct: 259 GVSE---SPENQFGKLMSIPDEPMRQYFTLLTDLPADEVDRLLGPDVNP-RDAKEVLARA 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFAT 363
           I T  HG E AE+AAT   +  +  I    +P +++ +  +     M    L+V     +
Sbjct: 315 IVTQYHGAEAAERAATEFRKRAE-RIDPDEIPQVNLERAALDAEGRMMAAKLVVALKLES 373

Query: 364 STNEARRHLKSNAIKIN--NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S + ARR ++   + I     +++     I++        + +  GK+     +L 
Sbjct: 374 SNSAARRLIEQGGVTIGPHRQVLTEPTGLIQVT-----PGLIVRVGKRKIAQVNLI 424


>gi|148242904|ref|YP_001228061.1| tyrosyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851214|emb|CAK28708.1| Tyrosyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 415

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 88/392 (22%), Positives = 157/392 (40%), Gaps = 27/392 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 42  EGRPLRIKLGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATR 101

Query: 92  RMMRSQEIQENIEKIKGIF------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             +  +E++ N                 +          +  N  WL  ++   ++  +G
Sbjct: 102 VQLTVEEVEANAATYLAQLGQGQPKEKALLDFETPGRLEVRRNSEWLADLELPQVIGLLG 161

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           +  +V +ML+ E    R      ++  EF Y +LQ YD V +    D  +++GG+DQ  N
Sbjct: 162 T-ATVGQMLAKEDFAKRYGSGTPIALHEFLYPLLQGYDSVAV----DADVELGGTDQKFN 216

Query: 206 IICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +  G DL         F L  P+L       KM K+L   + L ++  S Y+       +
Sbjct: 217 VAMGRDLQRHFNQRTQFGLLLPILVGLDGVQKMSKSLGNTVGLEEDPLSMYS---KLEKV 273

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            DA +  +   LT L ++ +        +   + +K +A  +T   HG E A KA + A 
Sbjct: 274 GDAAIDDYITLLTDLDLASL-------PQNPRDKQKAMALAVTASRHGLEAASKAQSDAA 326

Query: 325 ECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                    +  +P  S++  +V+       L+   G   S++EARR +K  A ++    
Sbjct: 327 TLVGGVGDAAADVPEASLA--QVNFPAKAFYLLSAVGICASSSEARRQIKGGAARLEGEK 384

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++   +             L  GKK      
Sbjct: 385 LTDPNQEFASAAELEGK--VLQLGKKTFRRLT 414


>gi|148240282|ref|YP_001225669.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147848821|emb|CAK24372.1| Tyrosyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 414

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 86/392 (21%), Positives = 152/392 (38%), Gaps = 27/392 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T SS+H GH      L   Q  GH  + ++G  T+ IGDP+ + ++R
Sbjct: 41  QGRPLRVKLGIDPTGSSIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSDTR 100

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETWLCSIKYIDLLREIG 145
             + ++++  N               T   D           N  WL  +     +  + 
Sbjct: 101 VQLTAEQVDANAATYLAQLGQGQPKDTALLDFETPGRLEVRRNSEWLEGLDL-PAVIGLL 159

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              +V +ML+ +    R      ++  EF Y +LQ YD V +    +  +++GG+DQ  N
Sbjct: 160 GTATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----NADVELGGTDQKFN 215

Query: 206 IICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +  G DL         F L  P+L       KM K+L   + L ++  S Y+       +
Sbjct: 216 VAMGRDLQRHFGKGTQFGLLLPILVGLDGVQKMSKSLGNTVGLEEDPLSMYS---KLEKV 272

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-REEAEKAATAA 323
            D  +  +   LT L ++ +            E +K +A  +T   HG    A+  A AA
Sbjct: 273 GDGAINDYVTLLTNLDLAALPE-------NPREKQKAMALAVTASRHGLEAAAKAQADAA 325

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                    +  +P  S++  +V+       L+   G   S+++ARR +K  A+++    
Sbjct: 326 SLVGGAGDAAAEVPEASLA--QVNFPAKAFYLLSAVGICASSSDARRQIKGGAVRLEGEK 383

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           I++   +             L  GKK      
Sbjct: 384 ITDPNQEFATAAELEGK--VLQLGKKTFRRLT 413


>gi|194477160|ref|YP_002049339.1| tyrosyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192167|gb|ACB43129.1| tyrosyl-tRNA synthetase [Paulinella chromatophora]
          Length = 420

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 93/410 (22%), Positives = 163/410 (39%), Gaps = 25/410 (6%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G   QI   R  +       +   +G D T + +H GH      L   Q  GH  + ++G
Sbjct: 28  GSSDQIFQLRLSEAEKFARPLRVKLGIDPTGTDIHLGHSILFRKLRAFQDAGHIAVLIIG 87

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNE 129
             T+ IGDP+ ++ +R  +  +E++ N +                 D           N 
Sbjct: 88  DFTARIGDPTGKNTTRVQLSIEEVEANAQTYLQQLGKDQPKEKALLDFETPGRLEVYQNS 147

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           TWL  +  +++++ +G+  +V +ML+ E   +R K    ++  EF Y +LQ YD V +  
Sbjct: 148 TWLGEMDLLEIIKLLGT-ATVGQMLAKEDFANRYKLGTPIALHEFLYPLLQGYDSVAIR- 205

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
                +++GG+DQ  N+  G DL         F L  P+L       KM K+L   + L 
Sbjct: 206 ---ADVELGGTDQRFNVAIGRDLQRYYGQRPQFCLLLPILPGLDGVQKMSKSLHNTVNLT 262

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           ++  S Y+       + D  V  +   LT + ++ +            E +K +A +IT 
Sbjct: 263 EDALSMYS---KLEKLPDNVVNQYLTLLTDIDLANL-------VGTPRERQKRMAFQITA 312

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKDEVSRGMGLLTLIVKAGFATSTNE 367
             HG   A  A   A +        +    +  +S +EV        L+   G   S++E
Sbjct: 313 NWHGDAAASAAQLDAAKLVVGIAGIELKQNLKEVSLNEVKFPAKAFYLLSAVGICASSSE 372

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ARR ++   ++++   I +   +       S     L  GKK      L 
Sbjct: 373 ARRKIQGGGVRLDGEKIIDPNQEFAKASDLSGK--VLQLGKKIFRRLILS 420


>gi|226291534|gb|EEH46962.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 612

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 120/499 (24%), Positives = 209/499 (41%), Gaps = 86/499 (17%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+  +   L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 82  RKSFLELMEERGLVNQVVGDRDALNKMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 141

Query: 64  QKTGHKPISLM----------------GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
              G + + L+                GG TS IGDP+ R+  R        +EN+  + 
Sbjct: 142 YVHGIRSVFLVSTCCFYALPRYILVQLGGSTSQIGDPTDREAPRAKQARITRKENMVNMH 201

Query: 108 GIFSSF--------IKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                F         K+G          ++NN  W     ++++++ +G    +  ML  
Sbjct: 202 LQLRIFGMSIERYGAKHGYAYEPIWRRAIVNNNAWWLKAPFMEVMKTMGESVRLGPMLGR 261

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ++V++RL+  + +S  EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  GID  + L
Sbjct: 262 DTVKNRLQSGKGMSLAEFTYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGIDATKAL 321

Query: 217 KTPKL------------------FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
                                     T+PLLTT SG K GKT   A+WL+K+MT  ++ +
Sbjct: 322 MKADQDYWRKHAPNPEDREILEPMGFTTPLLTTPSGEKFGKTAGNAVWLDKDMTPTFDLY 381

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEA 316
           Q++  + D +V  + K  T L +  I ++     ++     A+  +A+E   ++ G  EA
Sbjct: 382 QFFIRVPDENVEQYLKYFTFLSIPTIKKIMVQHMEDPSKRVAQHKLASEFVELMRGPAEA 441

Query: 317 EKAATA--------AMECFDMSIHSQHMPTISISKDEVSR----------------GMGL 352
            +A                  ++  +  P   I+  E S                 G   
Sbjct: 442 AQAEKDHRSLFGSLFGGQVSTALEMEARPKRDINLSETSPFRVPSPHVTLPRSLVVGQFF 501

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKI----NNSIISNEKLQI----------KLQDFDS 398
             ++  AG A+S  EA R +  N   +    ++  + ++KL              +    
Sbjct: 502 HKVLWSAGLASSKAEAMRLILQNGAAVASRSDSKAVMDDKLSYVPIKTWNKDETAKFIID 561

Query: 399 TGNIKLSFGKKNHIICHLC 417
              + L  GK    I  + 
Sbjct: 562 DSLLILRIGKWKVKIVKIV 580


>gi|328860193|gb|EGG09300.1| hypothetical protein MELLADRAFT_77170 [Melampsora larici-populina
           98AG31]
          Length = 518

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 126/466 (27%), Positives = 206/466 (44%), Gaps = 54/466 (11%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
                D +  L  R  I Q+++ R +         T Y+G D TASSLH G+L  L+ L 
Sbjct: 49  SNNSQDVIHKLESRQLIAQLTS-RAVRQHLIDQPRTIYLGIDPTASSLHVGNLLALIGLV 107

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
                GHK I L+GGGT I+GDPS R   R  +    +  N+E +    +  +       
Sbjct: 108 HFALNGHKTIVLLGGGTGIVGDPSGRSSERTSLSRSLVDSNVECLHKQVNKILDSALKHA 167

Query: 122 DALML-------------------NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              +                    NN  WL  +  +D L  +G    +  ML+ +SV+ R
Sbjct: 168 QTRVRHTDDHQDSKSPQIWLHRVKNNMEWLSGLTLLDFLGSVGKIARIASMLARDSVKQR 227

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------ 216
           +     +SF EF Y +LQAYDF +L   YDC +Q+GGSDQ+GNI+ GI++  ++      
Sbjct: 228 MDSGAGISFTEFTYQLLQAYDFNQLRHRYDCTIQLGGSDQYGNIMSGIEIMTKIGTHQKE 287

Query: 217 -----------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
                      + P+ + +T PLL    G K GK+   A+WL+  +T P + +Q +    
Sbjct: 288 NNQSSSELVETEIPQSYGVTLPLLLNHKGEKFGKSAGNALWLSSRLTPPVDLYQAFLRTP 347

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHGREEAEKAATA 322
           D+++  + + LT LP+  I+R+        ++  E +K++A EI  +VHG E   +A +A
Sbjct: 348 DSEIDKYLRMLTFLPLEVINRVMDDHQKGDRQRREPQKLLAQEIILLVHGSEGLSQALSA 407

Query: 323 AMECFDMSIHSQHM------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
                    +   +            P     +     G  + ++ V +G   S  E R 
Sbjct: 408 TEILHPSKGNLSMLTTNQFQDAFDGSPHHIRLQSNKVLGCSIDSIAVLSGLCKSKGEVRS 467

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +S AI +N+  + +    I+  D  +   I L  GK  + +  +
Sbjct: 468 LKQSGAITVNHQPLRDN--VIQDSDLLAGEFILLMRGKTAYKLVSI 511


>gi|308189596|ref|YP_003922527.1| tyrosine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319776747|ref|YP_004136398.1| tyrosyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624338|gb|ADN68643.1| tyrosine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318037822|gb|ADV34021.1| Tyrosyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 411

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 124/420 (29%), Positives = 221/420 (52%), Gaps = 25/420 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + QISN  +         V  Y G+D TA SLH G+   + +L   ++ G
Sbjct: 3   ILEDLKLRGILKQISNEDKFKK-LDPKKVAVYCGFDPTAQSLHLGNYVLISVLKRFKQYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            K   L+GG T +IGDPSF+D  R ++ ++ ++ N  KI+    +            +++
Sbjct: 62  FKVYGLIGGATGMIGDPSFKDSERVLLDNKTLKLNKSKIRKQLEAQ--------GLEVID 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +   +  ++ LR+ G   +V+ M++ +SV+ R+  E+ LSF EF+Y +LQ +DF++L
Sbjct: 114 NIQFYEKMNVLEFLRDAGKLVNVSYMMTKDSVQKRI--ERGLSFTEFSYQVLQGWDFLQL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA- 244
            KNY+  +Q+GGSDQWGN+  G+++  +++    K   +T+ LLT  +G K+GK+  G  
Sbjct: 172 YKNYNIMIQVGGSDQWGNLTTGLEMISKVEGDDHKAVVVTADLLTDENGNKIGKSTGGGK 231

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+K M SPY  +QY  N  D+ V +F   LT L   +I ++ +   +    + A++++
Sbjct: 232 LWLDKTMASPYEMYQYLLNQPDSKVETFLNWLTFLDNKKIAKIMEEHNQAPFKHVAQRVV 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----HMPTIS--ISKDEVSRGMGLLTL 355
           A+E+   + G++E + A       F+ +  +       + +I   +   E+ +   ++  
Sbjct: 292 ASEVVRDIFGQDELDSAIQITEVLFNKNFDTSKLNLKDLKSIEQYLPVVEIKQNQNIIET 351

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++ GF  S  EAR  + + A+KI+  I+  E    K ++F S        GKK  I+  
Sbjct: 352 LIEKGFIASKREAREFMATKALKIDEDIVE-ENSVYKPKNF-SKKYAFFRKGKKQTILLK 409


>gi|114645375|ref|XP_001135134.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 456

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 132/424 (31%), Positives = 196/424 (46%), Gaps = 35/424 (8%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH  I+L+GG T+ +GDPS                 +E +          G       
Sbjct: 103 RAGHNVIALVGGATARLGDPSG--------------LGLEALAANHQQLFTDGRSWGSFT 148

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  W    + +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYDF
Sbjct: 149 VLDNSAWYQKQRLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYDF 208

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   A
Sbjct: 209 YYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGNA 268

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKII 302
           +WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L     E    +K +
Sbjct: 269 VWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKRL 328

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDEVSRGMGL 352
           A E+T +VHGRE  + A       +  SI +  +               S+  +  G  +
Sbjct: 329 AAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTSV 388

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKLSFGKKNH 411
           L    KA          R +    + IN+  ++N +   I  Q     G   L  GK+N 
Sbjct: 389 LDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIGKRNF 448

Query: 412 IICH 415
            I  
Sbjct: 449 YIIK 452


>gi|188589972|ref|YP_001921276.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500253|gb|ACD53389.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 404

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 22/386 (5%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             I +  EL             +T  +G D +A  +H GH   L  +  +Q  GH+ + L
Sbjct: 17  ADIISIDELKEKLIKSEKENKPLTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVIL 76

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ + ++R+ +  +++ EN    +      +     K    +  N  WL 
Sbjct: 77  IGDFTGKIGDPTGKSKTRKPLTQEQVIENAMTYQKQILKVLD----KEKTEIRFNSEWLS 132

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K+ + + ++ +  +V RML  +  ++R      +   EF Y ++Q YD + L      
Sbjct: 133 KLKF-EEVLKLAATTTVARMLERDDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLK----A 187

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G  L + +   +  A+  P+L       KM K+L   I ++++  
Sbjct: 188 DIELGGTDQTFNILMGRTLQKGMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDEQ-- 245

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
                ++    + D  ++ + +  T      ID +      GK   + K  +A  IT++ 
Sbjct: 246 -AEVMFKKIMEVPDNLIIKYFELATDEHPDRIDEIKSDLENGKNPRDVKLELAKIITSLY 304

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  EE   A     + F        +P I+I K+ +     +  ++V  G   S  E RR
Sbjct: 305 HSEEETRAAIEYYEQVFKNGCLPSEVPEINIPKEFLKLKE-ISKILVDEGLVPSNKEFRR 363

Query: 371 HLKSNAIKINNSIISN-EKLQIKLQD 395
            ++   ++IN   +   +  +I   D
Sbjct: 364 LVEQGGVQINTEKVLEFDDAKINDND 389


>gi|126653939|ref|ZP_01725778.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589542|gb|EAZ83683.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 393

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 90/412 (21%), Positives = 172/412 (41%), Gaps = 29/412 (7%)

Query: 13  SERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            ++G    +  P  L  L      Q  +T  +G D +A  +H GH   L  +  LQ  GH
Sbjct: 1   MKKGTDKIVDEPELLKKLEHSFQEQKPLTIKLGLDPSAPDIHLGHAVVLRKIKQLQDLGH 60

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T  IGDP+ + + R  +  + ++EN +         +     +    +  N
Sbjct: 61  HAVIVIGDFTGRIGDPTGKSKGRVALSDELVKENAKTYCEQIFKVLD----EEKMTVRFN 116

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + + + ++ +  SV R+L  E  + R   +  +   EF Y ++QAYD VEL 
Sbjct: 117 SEWLAKLTF-EEVIQLAATTSVARILEREDFQKRYHHQIPIGLHEFFYPLMQAYDSVELK 175

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
                 +++GG+DQ  NI+ G  L       K  A+  PLL    G  KM K+L   I +
Sbjct: 176 ----ADIELGGTDQTFNILMGRTLQRHRGLEKQIAIFMPLLEGLDGIEKMSKSLGNYIGV 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           ++    P   ++    + D+ ++ + +  T     ++   +     G+   + K  +A  
Sbjct: 232 HEA---PEVMFKKIMELPDSLIIKYFELATDEHPLQVQAVQERLQNGENPRDIKLQLAEI 288

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T + HG      A +     F   +   ++P + +  D+  R   ++  ++   F  S 
Sbjct: 289 VTALYHGHAATMDAKSYFEAAFQKKMIPANIPVLLLEIDK-ERIEDIIPQLISIQFIQSK 347

Query: 366 NEARRHLKSNAIKINNSII--SNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  R +K N + +N   I   +    +  +D        L  GKK  +  +
Sbjct: 348 SDFIRLIKQNGVSLNGEKIAVDDLSQVLMNED-------VLQIGKKRFLKLN 392


>gi|87123678|ref|ZP_01079528.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. RS9917]
 gi|86168247|gb|EAQ69504.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. RS9917]
          Length = 415

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 89/408 (21%), Positives = 155/408 (37%), Gaps = 31/408 (7%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           Q    R          +   +G D T S +H GH      L   Q  GH  + ++G  T+
Sbjct: 30  QCLAARLAAATAEGRPLRIKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTA 89

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWL 132
            IGDP+ +  +R  +  +++Q N                + + + T     +  N   WL
Sbjct: 90  RIGDPTGKSATRVQLSKEQVQANATTYLNQLGQGQPKEQALLDFETPGRLEVRRN-SEWL 148

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +    ++  +G+  +V +ML+ +    R      ++  EF Y +LQ YD V +    D
Sbjct: 149 EGLDLPQVIGLLGT-ATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----D 203

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N+  G DL         F +  P+L       KM K+L   + L ++ 
Sbjct: 204 ADVELGGTDQKFNVAMGRDLQRHFGQRTQFGMLLPILVGLDGVQKMSKSLGNTVGLEEDP 263

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT-TMV 310
            S Y+       + D  +  +            D   +   +   E +K +A  +T +  
Sbjct: 264 LSMYS---KLEKVGDGAINDYVT-------LLTDLDLETLPENPREKQKAMALAVTASRH 313

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
                A+  A AA         +  +P  S++  EV+       L+   G   S++EARR
Sbjct: 314 GQEAAAKAQADAATLVGGAGDAAADVPEASLA--EVNFPAKAFYLLSAVGICASSSEARR 371

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +K  A ++    IS+   +             L  GKK      L G
Sbjct: 372 QIKGGAARLEGEKISDPNQEFASAAELEGK--VLQLGKKIFR--RLVG 415


>gi|251778285|ref|ZP_04821205.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082600|gb|EES48490.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 404

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 87/386 (22%), Positives = 165/386 (42%), Gaps = 22/386 (5%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             I +  EL             +T  +G D +A  +H GH   L  +  +Q  GH+ + L
Sbjct: 17  ADIISIDELKEKLIKSEKENKPLTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVIL 76

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ + ++R+ +  +++ EN    +      +     K    +  N  WL 
Sbjct: 77  IGDFTGKIGDPTGKSKTRKPLTQEQVIENAMTYQKQILKVLD----KEKTEIRFNSEWLS 132

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K+ + + ++ +  +V RML  E  ++R      +   EF Y ++Q YD + L      
Sbjct: 133 KLKF-EEVLKLAATTTVARMLEREDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLK----A 187

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G  L + +   +  A+  P+L       KM K+L   I ++++  
Sbjct: 188 DIELGGTDQTFNILMGRTLQKGMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDEQ-- 245

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
                ++    + D  ++ + +  T      ID +      GK   + K  +A  IT++ 
Sbjct: 246 -AEVMFKKIMEVPDNLIIKYFELATDEHPDRIDEIKSDLESGKNPRDVKLELAKIITSLY 304

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  EE   A     + F        +P I+I K+ +     +  ++V  G   S  E RR
Sbjct: 305 HSEEETIAAIEYYEQVFKNGCLPSEVPEINIPKEFLKLKE-ISKILVDEGLVPSNKEFRR 363

Query: 371 HLKSNAIKINNSIISN-EKLQIKLQD 395
            ++   ++IN   +   +  +I   D
Sbjct: 364 LVEQGGVQINTEKVLEFDDAKINDND 389


>gi|221311812|ref|ZP_03593659.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316138|ref|ZP_03597943.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221321049|ref|ZP_03602343.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325334|ref|ZP_03606628.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|40242|emb|CAA36724.1| tyrosine tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 412

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 179/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL         +   +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +          +  N  WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLDP----EKVELHYNSKWLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   + + E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 143 TLNL-EDVIELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 197

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL       KM K+    I +N+   
Sbjct: 198 DIELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINEH-- 255

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E     +  +       +AK ++A  I  M
Sbjct: 256 -PNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLARTIVRM 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A  +    F  +   + +P ++       + + ++ L+VK    +S +EAR
Sbjct: 315 YHGEKAAEAAEHSFKTVFQENSLPEDIPAVNWKG---EKTIAMIDLLVKLKLLSSKSEAR 371

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++I+   +++   + ++++     N+ +  GK+  +   
Sbjct: 372 RMIQNGGVRIDGEKVTDVHAKAEIRE-----NMIIQVGKRKFLKLQ 412


>gi|238810146|dbj|BAH69936.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 431

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 124/420 (29%), Positives = 221/420 (52%), Gaps = 25/420 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + QISN  +         V  Y G+D TA SLH G+   + +L   ++ G
Sbjct: 23  ILEDLKLRGILKQISNEDKFKK-LDPKKVAVYCGFDPTAQSLHLGNYVLISVLKRFKQYG 81

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            K   L+GG T +IGDPSF+D  R ++ ++ ++ N  KI+    +            +++
Sbjct: 82  FKVYGLIGGATGMIGDPSFKDSERVLLDNKTLKLNKSKIRKQLEAQ--------GLEVID 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +   +  ++ LR+ G   +V+ M++ +SV+ R+  E+ LSF EF+Y +LQ +DF++L
Sbjct: 134 NIQFYEKMNVLEFLRDAGKLVNVSYMMTKDSVQKRI--ERGLSFTEFSYQVLQGWDFLQL 191

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA- 244
            KNY+  +Q+GGSDQWGN+  G+++  +++    K   +T+ LLT  +G K+GK+  G  
Sbjct: 192 YKNYNIMIQVGGSDQWGNLTTGLEMISKVEGDDHKAVVVTADLLTDENGNKIGKSTGGGK 251

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+K M SPY  +QY  N  D+ V +F   LT L   +I ++ +   +    + A++++
Sbjct: 252 LWLDKTMASPYEMYQYLLNQPDSKVETFLNWLTFLDNKKIAKIMEEHNQAPFKHVAQRVV 311

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----HMPTIS--ISKDEVSRGMGLLTL 355
           A+E+   + G++E + A       F+ +  +       + +I   +   E+ +   ++  
Sbjct: 312 ASEVVRDIFGQDELDSAIQITEVLFNKNFDTSKLNLKDLKSIEQYLPVVEIKQNQNIIET 371

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++ GF  S  EAR  + + A+KI+  I+  E    K ++F S        GKK  I+  
Sbjct: 372 LIEKGFIASKREAREFMATKALKIDEDIVE-ENSVYKPKNF-SKKYAFFRKGKKQTILLK 429


>gi|187933167|ref|YP_001885896.1| tyrosyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721320|gb|ACD22541.1| tyrosine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 404

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/386 (22%), Positives = 166/386 (43%), Gaps = 22/386 (5%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             I +  EL             +T  +G D +A  +H GH   L  +  +Q  GH+ + L
Sbjct: 17  ADIISIEELKEKLIKSENENKPLTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVIL 76

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ + ++R+ +  +++ EN    +      +     K    +  N  WL 
Sbjct: 77  IGDFTGKIGDPTGKSKTRKPLTQEQVIENAMTYQKQILKVLD----KEKTEIRFNSEWLS 132

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K+ + + ++ +  +V RML  +  ++R      +   EF Y ++Q YD + L      
Sbjct: 133 KLKF-EEVLKLAATTTVARMLERDDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLK----A 187

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G  L + +   +  A+  P+L       KM K+L   I ++++  
Sbjct: 188 DIELGGTDQTFNILMGRTLQKGMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDEQS- 246

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
                ++    + D  ++ + +  T      ID +      GK   + K  +A  IT++ 
Sbjct: 247 --EVMFKKIMEVPDNLIIKYFELATDEHPDRIDEIKNDLENGKNPRDIKLELAKIITSLY 304

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  EE + A     + F        +P I+I K+ +     +  ++V  G   S  E RR
Sbjct: 305 HSEEETKAAIEYYEQVFKNGCLPSEVPEINIPKEFLKLKE-ISRILVDEGLVPSNKEFRR 363

Query: 371 HLKSNAIKINNSIISN-EKLQIKLQD 395
            ++   ++IN   +   +  +I   D
Sbjct: 364 LVEQGGVQINTEKVLEFDNAKINDND 389


>gi|123966723|ref|YP_001011804.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123201089|gb|ABM72697.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 412

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 93/386 (24%), Positives = 178/386 (46%), Gaps = 26/386 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           ++  +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  NKKKLRVKLGIDPTGTDIHLGHSILFRKLRAFQDNGHVAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIF------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             +  +E++EN +               I     +    +  N  WL ++    ++  +G
Sbjct: 98  VQLSEEEVKENSKTYLNQLGMGKSSDKSILDFESEDRIEIRYNSEWLKNLDLNSIIELMG 157

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              +V++ML+ E    R   +  ++  EF Y +LQ YD V +    +  +++GG+DQ  N
Sbjct: 158 R-STVSQMLAKEEFNKRYNDQTPIALHEFLYPLLQGYDSVIV----NSDIELGGTDQKFN 212

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           I  G DL    K    + +  P+LT   G  KM K+    + L+++  S Y+       +
Sbjct: 213 IAIGRDLQRHFKKEPQYGILLPILTGLDGIKKMSKSEFNTVGLSEDSLSMYS---KLEKV 269

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            D  + S+ + LT L +S I            + ++++A E+T++ HG++EA KA +   
Sbjct: 270 PDQLIPSYFELLTELDLSFIKET------NPRDLQRLMALEVTSLYHGKKEALKAQSNCE 323

Query: 325 ECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + F  +      +P IS+   E+   + L  L+       S++E++R +K   +KI+++ 
Sbjct: 324 KIFLGLKEKVGDIPIISLK--EIVFPVKLFYLLSSLNLFKSSSESKRSIKGGGVKIDSNK 381

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + N  L    ++        L  GKK
Sbjct: 382 LVNPDLVFDSKEALKGK--ILQIGKK 405


>gi|16080897|ref|NP_391725.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|239938718|sp|P25151|SYY2_BACSU RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|413933|emb|CAA51565.1| ipa-9r [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636381|emb|CAB15872.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 413

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 179/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL         +   +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 28  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +          +  N  WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLDP----EKVELHYNSKWLK 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   + + E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 144 TLNL-EDVIELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL       KM K+    I +N+   
Sbjct: 199 DIELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINEH-- 256

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E     +  +       +AK ++A  I  M
Sbjct: 257 -PNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLARTIVRM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A  +    F  +   + +P ++       + + ++ L+VK    +S +EAR
Sbjct: 316 YHGEKAAEAAEHSFKTVFQENSLPEDIPAVNWKG---EKTIAMIDLLVKLKLLSSKSEAR 372

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++I+   +++   + ++++     N+ +  GK+  +   
Sbjct: 373 RMIQNGGVRIDGEKVTDVHAKAEIRE-----NMIIQVGKRKFLKLQ 413


>gi|321313406|ref|YP_004205693.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019680|gb|ADV94666.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 412

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 179/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL         +   +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +          +  N  WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLDP----EKVELHYNSKWLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   + + E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 143 TLNL-EDVIELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 197

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G    ER    K   +  PLL       KM K+    I +N+   
Sbjct: 198 DIELGGTDQHFNILMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINEH-- 255

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E     +  +       +AK ++A  I  +
Sbjct: 256 -PNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRI 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A  +    F  +   + +P ++       + + ++ L+VK    +S +EAR
Sbjct: 315 YHGEKAAEAAEHSFKTVFQENSLPEDIPAVNWKG---EKTIAMIDLLVKLKLLSSKSEAR 371

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++I+   I++   + ++++     N+ +  GK+  +   
Sbjct: 372 RMIQNGGVRIDGEKITDVHAKAEIRE-----NMIIQVGKRKFLKLQ 412


>gi|33865104|ref|NP_896663.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81572943|sp|Q7TTW9|SYY_SYNPX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33638788|emb|CAE07083.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. WH 8102]
          Length = 415

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 86/392 (21%), Positives = 146/392 (37%), Gaps = 27/392 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 42  EGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKCATR 101

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------LNNETWLCSIKYIDLLREIG 145
             +  +++  N               T   D           N  WL  +     +  + 
Sbjct: 102 VQLSKEDVAANASTYLRQLGQDQPKETALLDFETPGRLEVRYNSEWLEGMDL-PAVIGLL 160

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              +V +ML+ +    R      ++  EF Y +LQ YD V +    +  +++GG+DQ  N
Sbjct: 161 GTGTVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----NADVELGGTDQKFN 216

Query: 206 IICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +  G DL         F L  P+L       KM K+L   + L ++  S Y+       +
Sbjct: 217 VAMGRDLQRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEEDPLSMYS---KLEKV 273

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            D  +  +            D       +   E +K +A  +T   HG E A+KA   A 
Sbjct: 274 GDGAINDYVT-------LLTDLDLATLPENPREKQKAMALAVTASRHGMEAAQKAQLDAA 326

Query: 325 ECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                    +  +P  S++  EV+       L+   G   S++EARR +K  A+++    
Sbjct: 327 SLVGGAGDAATEVPGASLA--EVNFPAKAFYLLSAVGICASSSEARRQIKGGAVRLEGEK 384

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           I +   +             L  GKK      
Sbjct: 385 IGDPNQEFASAAELEGK--VLQLGKKTFRRLT 414


>gi|116073605|ref|ZP_01470867.1| tyrosyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068910|gb|EAU74662.1| tyrosyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 415

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 82/392 (20%), Positives = 148/392 (37%), Gaps = 29/392 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 42  EGRPLRIKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATR 101

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  ++++ N                + + + T     +  N   WL  +    ++  +
Sbjct: 102 VQLTKEQVESNATTYLRQLGQGQPKEQALLDFETPGRLEVRRN-SEWLEGLDLPQVIGLL 160

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G+  +V +ML+ +    R      ++  EF Y +LQ YD V +    D  +++GG+DQ  
Sbjct: 161 GT-ATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----DADVELGGTDQKF 215

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F +  P+L       KM K+L   + L ++  S Y+       
Sbjct: 216 NVAMGRDLQRHFGQRTQFGMLLPILVGLDGVQKMSKSLGNVVGLEEDPLSMYS---KLEK 272

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT-TMVHGREEAEKAATA 322
           + D  +  +            D   +   +   E +K +A  +T +       A+    A
Sbjct: 273 VGDGAIDDYVT-------LLTDLDLETLPENPREKQKAMALAVTASRHGNDAAAKAQTDA 325

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           A            +P  S++  EV+       L    G   S++EARR +K  A ++   
Sbjct: 326 ASLVGGSGDAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGE 383

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            I++   +             L  GKK     
Sbjct: 384 KITDPNQEFASAAELEGK--VLQLGKKTFRRL 413


>gi|71894632|ref|YP_278740.1| tyrosyl tRNA synthetase [Mycoplasma synoviae 53]
 gi|97201683|sp|Q4A5E2|SYY_MYCS5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71851420|gb|AAZ44029.1| tyrosyl tRNA synthetase [Mycoplasma synoviae 53]
          Length = 411

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 134/424 (31%), Positives = 213/424 (50%), Gaps = 26/424 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
               L+ L +R  +  ISN  +   L        Y+G+D TA SLH G+  Q++ L   +
Sbjct: 1   MHKVLTELRDREILKDISNEEKF--LSLPKNSGVYVGFDPTADSLHLGNYVQIVNLIRFK 58

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K     ++++GG T +IGDPSFR   R ++ ++E+ +N  KIK    SF           
Sbjct: 59  KHNWNALAVLGGATGMIGDPSFRSTERVLLSTEELLKNKNKIKSQLESF--------GLK 110

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + +N      I ++D L+ IG   +V+ ML+ +SV+ RL   Q LSF EF+Y I+Q YDF
Sbjct: 111 VFDNYEIYKDISFLDFLKNIGKLINVSYMLAKDSVKDRL--AQGLSFTEFSYQIIQGYDF 168

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL- 241
           + L +N D  +Q GGSDQWGNI  GI++  ++     K  A+T+ LLT ++G K GK+  
Sbjct: 169 LHLYQNQDIFVQYGGSDQWGNITTGIEMISKVVGDNHKAIAITANLLTDSNGNKFGKSTG 228

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
            G +WL+ + T P++ +Q+  N  D++V    K LT L +SEI        +  +   A+
Sbjct: 229 GGNLWLDAQKTKPFDMYQFLINQPDSEVEKLLKWLTFLEISEIKDLVNKHNKNPKDRLAQ 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIH-------SQHMPTISISKDEVSRGMGL 352
           K +A E+   +HG+  AE     +   F++S+        +       I   EV +G+ L
Sbjct: 289 KALAYEVIKDIHGKSAAENCTFLSEMLFNLSLDLSKVTLENMEFAYNQIESFEVEKGVNL 348

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V+     S   AR  + S ++K N   I +E   +    F       L  GKK  +
Sbjct: 349 VNFLVENKILQSKRLAREFIASKSLKFNYEPI-DEDFSVSSNYF-EGKYATLHLGKKKIL 406

Query: 413 ICHL 416
           IC +
Sbjct: 407 ICKV 410


>gi|330861036|emb|CBX71307.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 347

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 180/344 (52%), Gaps = 9/344 (2%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+  NN  W   +  + 
Sbjct: 1   MIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIAANNYDWFGGMNVLT 60

Query: 140 LLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +LQAYDF  L K +   LQ+G
Sbjct: 61  FLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDFACLNKAHGVALQIG 120

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           GSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA+WL+ + TSPY F+
Sbjct: 121 GSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFY 180

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEA 316
           Q+W N  DADV  F K  T + + EI+          +   A+ ++A  +T MVHG E  
Sbjct: 181 QFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPRAQYVLAENVTGMVHGEEGL 240

Query: 317 EKAATAAMECFDMSIH------SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
             A       F   ++         +    +   E++R   L   +V A    S  +AR 
Sbjct: 241 AAAKRITASLFSGDLNDMTEADFAQLAQDGMPTIELTRDADLQQALVNAELVPSRGQART 300

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            + SNA+ IN    S+ +      D        L  GKK++ + 
Sbjct: 301 MISSNAVAINGEKQSDPEYAFTDADRLFGRYTLLRRGKKHYCLI 344


>gi|56751549|ref|YP_172250.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301379|ref|YP_401587.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81561905|sp|Q5N1U0|SYY_SYNP6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115305825|sp|Q31K19|SYY_SYNE7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56686508|dbj|BAD79730.1| tyrosyl tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170260|gb|ABB58600.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 402

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 91/386 (23%), Positives = 166/386 (43%), Gaps = 22/386 (5%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E RR
Sbjct: 37  DRPLRIKLGIDPTGSDIHLGHSIIFRKLRQFQDAGHTAVLIIGDFTARIGDPTGKSEVRR 96

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            + ++++Q N E         + + T      +  N  WL  +    +L  +G+  +V +
Sbjct: 97  QLTAEDVQRNAETYLDQLRPILDFETP-GRLEIRYNSEWLAGLDLAKILELLGTM-TVGQ 154

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R  +   +   EF Y ++Q YD V +       +++GG+DQ  NI  G DL
Sbjct: 155 MLAKEGFSERYDKGTPVYLHEFLYPLMQGYDSVAVQ----SDVELGGTDQKFNIAVGRDL 210

Query: 213 GERLKTPKLF-ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                    F  L   L+      KM K+L   + LN++  S Y+       + DA V  
Sbjct: 211 QRHFGLQPQFGLLLPILIGLDGSQKMSKSLGNYVGLNEDALSMYS---KLEKVPDALVAD 267

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS- 330
           + + LT+  ++ +            + +K++A ++ +  HG E A  A  AA E    S 
Sbjct: 268 YFELLTSQDLAALPE-------NPRDRQKLLALDVVSQYHGAEAAAAAQKAAQELVQGSA 320

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           + ++ +P   +S  +V+       L+   G   +++EARR ++  A++++   + +    
Sbjct: 321 VQAEAVPEFPLS--QVNFPAKAFYLVSAVGLGLTSSEARRQIQGGAVRLDGQKLDDPNHI 378

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHL 416
            +           +  GKK  +   L
Sbjct: 379 FEAPTALKGR--VIQVGKKKFVRLVL 402


>gi|307128554|ref|YP_003880584.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483016|gb|ADM89886.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 425

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 221/417 (52%), Gaps = 24/417 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             + +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L   Q
Sbjct: 1   MKNLIKELFWRGLIHDSTYNEQIK----NEIITLYTGFDPTYKSLHIGNLVAIIMLIHFQ 56

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+  IS++GGGT IIGDPS ++  R +++ + +  NI  I+   S +I +      + 
Sbjct: 57  KYGNNIISVIGGGTGIIGDPSGKNSERNLIKKELLNYNIRNIRKQLSLYIDF--NFKKSE 114

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  WL    +ID +R+IG  FS+N ML+ +S++ R+  ++S+SF EF Y +LQAYDF
Sbjct: 115 ILNNYEWLKKNLFIDFVRDIGKSFSINYMLTKDSIKKRISNKKSISFTEFTYQLLQAYDF 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS-G 243
             L K   C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +  
Sbjct: 175 FYLYKKKKCSLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGE 234

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            IW++  +TSPY F+Q+W NI D     + K  T L   EI  +     K+      +K 
Sbjct: 235 NIWIDPNLTSPYEFYQFWINITDDQAKKYIKIYTFLKKEEIKEIIDNHEKKPKLKLIQKK 294

Query: 302 IATEITTMVHGREEAEKAATAAM------------ECFDMSIHSQHMPTISISKDEVSRG 349
           IA+EIT  +HG+E   K    +                D+    +++P   I     +  
Sbjct: 295 IASEITIFIHGKEIFNKVKLISNILFKKEKSIKKISKKDIIYIYKYIPHKKIYIYN-NFN 353

Query: 350 MGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + +L L+V K+ F  S  +A RHLK N+I IN   I +EK  +K  D  S   + L 
Sbjct: 354 IPILDLLVNKSNFLKSKKKAIRHLKLNSILIN-KKIVDEKFILKKNDLISESYVLLQ 409


>gi|87301176|ref|ZP_01084017.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284144|gb|EAQ76097.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 411

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 93/391 (23%), Positives = 154/391 (39%), Gaps = 28/391 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +Q  +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDPS R  +R
Sbjct: 39  AQRPLRIKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPSGRSATR 98

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             + + E++ N +              S + + T     +  N   WL  +    ++  +
Sbjct: 99  VQLSAAEVEANADTYLVQLGLGQPPEQSLLDFTTPGRLEVRRN-SEWLAGLDLPQVIELL 157

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G+  +V +ML+ E   +R      +S  EF Y +LQ YD V +A      L++GG+DQ  
Sbjct: 158 GT-STVGQMLAKEEFANRYGSGTPISLHEFLYPLLQGYDSVAVA----SDLELGGTDQKF 212

Query: 205 NIICGIDLGERLKTPKLF-ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F  L   L       KM K+L   + L +   + Y+       
Sbjct: 213 NVAMGRDLQRHFGQRPQFGLLLPILPGLDGVQKMSKSLGNTVGLKEGPLAMYS---KLEK 269

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + DA    +   LT L                 E +K +A  IT   HG E A  A   A
Sbjct: 270 VPDAVAEQYLTLLTDLDPDHW-------PTSPRERQKALALAITAARHGLEAASAAQADA 322

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                  + +Q +P  S++   V+       L+   G   S++EARR ++   ++++   
Sbjct: 323 ANLVAGEMAAQTVPETSLAP--VTFPAKAFHLLSALGLCASSSEARRQIQGGGVRLDGEK 380

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +++                 L  GKK  +  
Sbjct: 381 LTDVNRSFSAASELEGR--VLQLGKKTFLRL 409


>gi|169829079|ref|YP_001699237.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
 gi|168993567|gb|ACA41107.1| Tyrosyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 404

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 87/413 (21%), Positives = 171/413 (41%), Gaps = 29/413 (7%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           + ++G    +     L  L      +  +T  +G D +A  +H GH   L  +  LQ  G
Sbjct: 11  IIKKGANKIVDELELLQKLERSFQEKKPLTIKLGLDPSAPDIHLGHAVVLRKIKQLQDLG 70

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  + ++G  T  IGDP+ + + R  +  + + EN +         +     +    +  
Sbjct: 71  HHAVIVIGDFTGRIGDPTGKSKGRVALSDELVGENAKTYCEQIFKVLD----EEKTTIRF 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + + + + ++ +  SV R+L  E  + R  ++  +   EF Y ++QAYD VEL
Sbjct: 127 NSEWLAKLNF-EEVIQLAATTSVARILEREDFQKRYHQQIPIGMHEFFYPLMQAYDSVEL 185

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  NI+ G  L       K  A+  PLL       KM K+L   I 
Sbjct: 186 K----ADIELGGTDQTFNILMGRTLQRHRGLEKQIAIFMPLLEGLDGVEKMSKSLGNYIG 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           +++    P   ++    I D+ ++ + +  T     ++  + +         + K  +A 
Sbjct: 242 IHEA---PEVMFKKIMEIPDSLIIKYFELATDEHPLQVQAIQERLRMGENPRDLKLHLAE 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +T + HG      A +     F   +   ++PT+ +  D+  R   ++  ++   F  S
Sbjct: 299 IVTALYHGHAATMDAKSYFEAAFQKKVIPTNIPTLLLEIDK-ERIEDIIPQLISIHFIQS 357

Query: 365 TNEARRHLKSNAIKINNSII--SNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ++  R +K N + +N   +   +    +  +D        L  GKK  +  +
Sbjct: 358 KSDFLRLIKQNGVSLNGEKMAADDLSRVLMNED-------VLQIGKKRFLKLN 403


>gi|299537706|ref|ZP_07050995.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
 gi|298726685|gb|EFI67271.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
          Length = 404

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 174/417 (41%), Gaps = 30/417 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K     I+ E+  +      +       Q  +T  +G D +A  +H GH   L  +
Sbjct: 9   MTIIKKGANKIVDEQDLL-----EKLERSYKEQRPLTIKLGLDPSAPDIHLGHAVVLRKI 63

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q  GH  + ++G  T  IGDP+ + + R  +    +++N +         +      
Sbjct: 64  KQMQDLGHHAVIVIGDFTGRIGDPTGKAKGRTALNDDTVKKNGQTYCEQIFKVLDP---- 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  + + + + ++ +  SV R+L  E  + R ++   +   EF Y ++Q
Sbjct: 120 NKTTVRFNSEWLAKLSF-EEVIKLAATTSVARLLEREDFQKRYQQHIPIGIHEFFYPLMQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
           AYD VEL       +++GG+DQ  NI+ G  L +     K  A+  PLL    G  KM K
Sbjct: 179 AYDSVELV----ADIELGGTDQTFNILMGRSLQKHRGLEKQIAIFMPLLEGLDGIEKMSK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I +N+    P   ++    + D  ++ + +  T      +   +    +G+   +
Sbjct: 235 SLGNYIGINEA---PEIMFKKVMEVPDTLIIKYFELATDEHPLHVQAIQDRLQKGENPRD 291

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A  ITT+ HG    E+A       F      +++P + +  D+  R M ++  +V
Sbjct: 292 LKFLLAEIITTLYHGSTAMEEARAYFEAAFQKKEIPKNIPILLLEIDK-ERIMDIIPQLV 350

Query: 358 KAGFATSTNEARRHLKSNAIKINNSI--ISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             GF  S +E  R +K   + +N     + +    +   D        L  GKK  +
Sbjct: 351 VMGFIQSKSEFLRLIKQKGVSLNGEKMAMDDLSQVLMNND-------ILQIGKKRFL 400


>gi|50554259|ref|XP_504538.1| YALI0E29139p [Yarrowia lipolytica]
 gi|49650407|emb|CAG80141.1| YALI0E29139p [Yarrowia lipolytica]
          Length = 527

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 48/444 (10%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L +R  +  ++    L+    Q   + Y+G D +  S+H GH+  +M++  L   
Sbjct: 53  SLLQYLKDRNLVANVT-EDSLEQQLQQKFTSFYLGIDPSGPSMHLGHMVPVMIMLHLFLR 111

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---------- 116
           GH   +L+GG T  +GDP+ + E R+ +    +Q N++ +         +          
Sbjct: 112 GHYAFALVGGATGAVGDPTGKTEERKTVVKDTLQYNLDALATSLERTFLHAVAAAKKEGV 171

Query: 117 ---GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                 K    ++NN  W  ++ +++ L   G    VN+M++ +SV+ RL     + + E
Sbjct: 172 YYGDQIKLQYAIVNNHDWWKNVGFLEFLASYGRLIRVNQMMARDSVKDRLNSATGIGYNE 231

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-----LKTPKLFALTSPL 228
           F+Y ILQA+DF  L +   C LQ+GG DQWGNI  G+DL +R           + +T+ L
Sbjct: 232 FSYQILQAFDFWHLFETQGCSLQLGGGDQWGNITAGVDLTKRAAAVNNLKETPYGITTQL 291

Query: 229 LTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           + + SG K+GK+ + A IWLN EMT P+  +QY     D DV  + K  T + + +I  +
Sbjct: 292 MLSKSGKKLGKSENNATIWLNPEMTRPFELYQYLLKTADEDVEQYLKMFTFVSLEDIATI 351

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
            +   +      A++++A + T ++HG     +        F  S    +          
Sbjct: 352 MRQHAENESLRYAQRVLADKFTALIHGDTVVGRCQVITRIMFAKSSLELNQQP---KPAA 408

Query: 346 VSRGMGLLTLIVKAGFAT------------------STNEARRHLKSNAIKINNS---II 384
           ++    L  ++ + G                     S + A++ + +  + +       +
Sbjct: 409 LTNSESLKQVLAEEGLLKPLDKSTDYTTLVSTHFNMSKSAAKKLISNKGVSVGLEGAQKV 468

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGK 408
             E   I  +  D    + +  GK
Sbjct: 469 --EIGPILEKHKDMGDFLIVRVGK 490


>gi|115397901|ref|XP_001214542.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192733|gb|EAU34433.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 608

 Score =  250 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 123/498 (24%), Positives = 209/498 (41%), Gaps = 88/498 (17%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +      L  + ++  V  Y G D TA S+H GH+   M+L W 
Sbjct: 85  RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGMYAGIDPTAPSMHVGHMLPFMVLAWG 144

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---------- 113
              G     L+GG TS IGDP+ R + R  + S   + N+  +                 
Sbjct: 145 YVWGLPVTFLLGGSTSRIGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIERYGKR 204

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
              +       A ++NN TW   + ++++LR++GS   +  ML  E+V++R+ +   +SF
Sbjct: 205 HGYEKKWIWKRA-LVNNNTWWNKVPFLEVLRDLGSHTRLGPMLGRETVKNRMAKGDGMSF 263

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------------RL 216
            EF Y ILQ +D+  + +    ++Q+GGSDQ+GNI+ G+D  +                 
Sbjct: 264 AEFAYPILQGWDWWTMFR-NGVQVQVGGSDQYGNILFGMDAVKAISKNTVMEQQQDPLEN 322

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              K    T+PLLT  SG K GK+   AIWL+K+MTS +  +Q++    D  V  + K  
Sbjct: 323 DLDKPIGFTTPLLTAPSGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDAVERYLKMF 382

Query: 277 TTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATA------------ 322
           T +P+ EI ++ + Q ++     A+  +A E   ++HG+EEA+  A              
Sbjct: 383 TFIPLPEIAKIMEQQNQDPSKRVAQHALAYEFVELIHGKEEADAVALQHRQLFRPRSSTA 442

Query: 323 ----------------------AMECFDMSIHSQHMPTISISKDEVSRGMGLL------T 354
                                  +     ++H+      ++    V+    L+       
Sbjct: 443 EPTPLGPTTSPQSRAMRGPDASFVNPQSGNVHAPQTNFANMPNMNVTLPKSLVYNQTFNK 502

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISN-----EKLQIKL---------QDFDSTG 400
           ++  AG  +S +E  R + +    +  S   +     + L             QDF   G
Sbjct: 503 ILWSAGLVSSKSEGHRVIANKGAYV-GSRPGDSGPMGDDLSFTPIQTWESTKTQDFIVDG 561

Query: 401 NIK-LSFGKKNHIICHLC 417
            +  L  GK    +  + 
Sbjct: 562 ELLFLKLGKWKFKMVKII 579


>gi|47459382|ref|YP_016244.1| tyrosyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614119|sp|Q6KH97|SYY_MYCMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|47458712|gb|AAT28033.1| tyrosyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 415

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 115/407 (28%), Positives = 201/407 (49%), Gaps = 21/407 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            + FL  L E+  I  ISN  +++    +  +  Y+G+D +A S+H G+   + +L   +
Sbjct: 1   MNSFLKELQEKNLIQDISNIEKIENSL-KNKMGIYVGFDPSAKSIHLGNFVVINVLLIAK 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K     ++L+GG T  IGDPS +   R ++    +++N E IK     F+       DA 
Sbjct: 60  KHRIPTVALIGGATGGIGDPSGKKSERILIDEDTLKKNTEAIKKQIKHFLP------DAK 113

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  +  +  +ID LR++G F  V+ MLS E V++RL  E  +SF EF Y ++QA DF
Sbjct: 114 IVNNSDFYKNQSFIDFLRDVGKFIQVSYMLSKEIVKNRL--ESGISFTEFAYSLIQANDF 171

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF--ALTSPLLTTASGTKMGKTLS 242
             L KN++  +Q GGSDQWGNI  G++L  +      F    T  LL  + GTK GK+  
Sbjct: 172 HYLFKNHNVGIQFGGSDQWGNITTGLELIRKRNGENSFSGGFTIKLLLKSDGTKFGKSEQ 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           GAI+L+  +TSPY  +Q+  N +D+D+++    ++ L + EI  +        E    +K
Sbjct: 232 GAIYLDPSLTSPYTMYQFLLNQNDSDLLNLFNFISDLGIKEILEIITKHSENPEKRYGQK 291

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQH--------MPTISISKDEVSRGMGL 352
           ++A  I   +HG+    +    +   F     +          + +  ++    S    +
Sbjct: 292 MLANNIVNRIHGKNALNEVENISNILFKNGKINDLSKSEVSIIINSFEVNHVNFSNDEKI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           + ++ +A    S NE R+ ++   + +   II++    +K  +    
Sbjct: 352 IDILDRAKIFKSKNEIRKLIEQKGLVVGAEIITDFDQILKDSNLTHG 398


>gi|146301128|ref|YP_001195719.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146155546|gb|ABQ06400.1| predicted tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 400

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 102/399 (25%), Positives = 169/399 (42%), Gaps = 26/399 (6%)

Query: 23  NPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
               L+   +        +   +G+D TA  LH GH   L  L   Q  GH+ + L+G  
Sbjct: 16  PENGLEEKLNQAEKENRKLIIKLGFDPTAPDLHLGHAVVLKKLKQFQDLGHQIVILVGSF 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T+ IGDP+ +++SR+ +  QE+Q N E      S  I        A ++ N  WL S+ +
Sbjct: 76  TARIGDPTGKNKSRKPLNVQEVQHNAETYIAQLSKIID----VEKAQIVFNSDWLDSLSF 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
              + +I S  +V +++       R      ++  E  Y ILQ +D V++    +  ++M
Sbjct: 132 -SEVIQIMSNVTVAQLMQRNDFNKRFTENTPIAMHELVYPILQGFDSVKI----NADIEM 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N   G  L E  K      +  PLL       KM K+L+  I L      P  
Sbjct: 187 GGTDQLFNCTMGRQLQETFKKSPQIVMCMPLLRGLDGKEKMSKSLNNIIGLT---DEPNE 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMVHGREE 315
            +    +I D  ++ F +  T     E   +    + +     KKIIA  I    H  ++
Sbjct: 244 MFGKTMSIPDDLILEFLELTTDFSTKEKQEIKNRLKEENPMNIKKIIAKNIINQYHDEKK 303

Query: 316 AEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           A+KA    +  F      +   +P +  S +  S  M L+ L        + +  RR ++
Sbjct: 304 ADKAEDFFVNQFQNKNFEEKSFVPVLISSLENKSDQMALIDLCAFIKNDITKSANRRLIE 363

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S A+++NN  I+N    I+L+        K+  GK+N  
Sbjct: 364 SGAVQVNNLKITNPYELIELK-----KETKIKIGKRNFY 397


>gi|262340852|ref|YP_003283707.1| tyrosine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272189|gb|ACY40097.1| tyrosine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 361

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 122/364 (33%), Positives = 198/364 (54%), Gaps = 22/364 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + + +  LS RG I        ++    +  +T YIG+D T+ SLH G L  L++L   
Sbjct: 1   MQKNIIEELSWRGLIKNKVP--GIENQL-KKPITMYIGFDPTSDSLHLGSLLPLIILIHF 57

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHK + L+GG T  IGDPS ++ SR ++  + +Q+N E IK      +K  + +T+ 
Sbjct: 58  QKMGHKSLVLIGGATGFIGDPSGKENSRILLDKEILQKNTESIKNQILKLLKVHSEETE- 116

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAY 182
            +LNN  W+ ++ +++ +R+IG +F+VN M+S +SV+ R   ++  +SF EF+Y ++Q Y
Sbjct: 117 -LLNNLDWIQNVSFLEFIRDIGKYFTVNHMISKDSVKKRINDKKNGISFTEFSYSLIQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL- 241
           DF+ L +  +C LQ+GGSDQWGNI  GI+L  +    K++  T PL+T  +G K GK+  
Sbjct: 176 DFLYLNQMRNCLLQIGGSDQWGNITTGIELIRKKTGKKVYGFTFPLITKPNGIKFGKSEK 235

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
              IWL+K  T+PY F+Q+W NI D ++  + K  T L   +ID++             +
Sbjct: 236 EENIWLDKSKTTPYKFYQFWINISDFEIEKYVKIYTFLSKEKIDQLIIQHKKNPSQRFLQ 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIH-------------SQHMPTISISKDEV 346
           K +A E+T  VHG   +E+        F                    H+P + +S +E 
Sbjct: 296 KKLAYEMTKWVHGNLISEEIMKITNVLFHNKNETLQLLNEETLISIYNHIPHMILSFEEF 355

Query: 347 SRGM 350
            +G+
Sbjct: 356 QKGI 359


>gi|322694649|gb|EFY86473.1| Tyrosyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 624

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 114/467 (24%), Positives = 191/467 (40%), Gaps = 57/467 (12%)

Query: 8   FLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              +L ERG+I  ++  P ++  +     + AY+G D TA SLH GHL   M LFWL   
Sbjct: 67  VWDVLDERGYIKDVAGTPAKIKEVMRIKRIGAYVGVDPTADSLHIGHLLPFMPLFWLWFN 126

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT----- 121
           G+  ++L+GG T+ IGDP+ R +SR  M + EI +N+ KI    +   +           
Sbjct: 127 GYPAVTLLGGATARIGDPTGRLQSREHMPNSEISKNVTKIHYQLTRLWRNVVVLREKYGY 186

Query: 122 ------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +LNN  WL  +   D  + +     +  MLS ++V+ ++     +S  EF 
Sbjct: 187 EKDWAAKRHLLNNNMWLQGLSVYDFTKRLARNTRIGPMLSRDTVKRKMTEGDGMSLGEFM 246

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------------TPKL 221
           Y + Q +DF  +      ++Q+GGSDQ+GNI+ GID  + ++                + 
Sbjct: 247 YPLFQGWDFWHMYNKLGVQMQIGGSDQYGNIVAGIDALKVIRDSEEASHAKMPTEWQHEP 306

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
              T PLL  ++G K GK+   A+WL++  TSP+  + Y+    D +V    K  T +PM
Sbjct: 307 MGFTVPLLLDSAGVKFGKSAGNAVWLDEFKTSPFELYGYFMRRADDEVEKLLKLFTFMPM 366

Query: 282 SEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------ 333
           ++I               A+  +A E+ ++V+G + A + A      F   +        
Sbjct: 367 AQIHETMTQHRADPSKRVAQHTLAFEVLSLVYGSQRALQEAQQHKFRFGGELPHVTNEPS 426

Query: 334 --------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                    + P   I        +    L+   G A+S ++ +R +      +      
Sbjct: 427 KDSGIVTPNNAPRSDIQLPRSVMKLSPAKLLFATGLASSNSDGQRLVAQQGAYVAAQPGQ 486

Query: 386 NEKLQI---------------KLQDFDSTGNIKLSFGKKNHIICHLC 417
              L                   +       + L  GK N  I  L 
Sbjct: 487 TRGLVPGNLSWTPMKMWFPEETAKYLIDEKILILRKGKHNVRIVELV 533


>gi|33861885|ref|NP_893446.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81575709|sp|Q7V0D7|SYY_PROMP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33640253|emb|CAE19788.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 412

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 182/413 (44%), Gaps = 38/413 (9%)

Query: 15  RGFIHQISNPRELDILCSQG---------VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG I +    R  D   S            +   +G D T + +H GH      L   Q 
Sbjct: 13  RG-IEESFPLRNFDQTLSSKINDANKSKSKLRVKLGIDPTGTDIHLGHSILFKKLRAFQD 71

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGT 118
            GH  + ++G  T+ IGDP+ ++++R  +  +E++EN +              S + +  
Sbjct: 72  NGHVAVLIIGDFTAQIGDPTGKNKTRVQLSEEEVKENSKTYLNQLGMGKSSDKSILDFD- 130

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            +    +  N  WL ++    ++  +GS  +V++ML+ E    R   +  ++  EF Y +
Sbjct: 131 SEDRIEIRYNSEWLKNLNLNSIIELMGS-ATVSQMLAKEEFNKRYNSQTPIALHEFLYPL 189

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKM 237
           LQ YD V +    +  +++GG+DQ  NI  G DL    K    + +  P+LT   G  KM
Sbjct: 190 LQGYDSVAV----NSDIELGGTDQKFNIAIGRDLQRHFKQEPQYGILLPILTGLDGIKKM 245

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
            K+ S  + L+++  S Y+       + D  + S+ + L          +  L+     +
Sbjct: 246 SKSESNTVGLSEDSLSMYS---KLEKVPDNIIPSYFELL------TELDLTLLKDNNPRD 296

Query: 298 AKKIIATEITTMVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
            ++ +A E+T++ HG+EEA +A +   +    +      +P IS+   E+   +    L+
Sbjct: 297 LQRRMALEVTSLYHGKEEALRAQSNCEKLFLGLKEKVGEIPIISLK--EIVFPVKFFYLL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
                  S++E++R +K   +KI++  + N  L    ++  S     L  GKK
Sbjct: 355 SSLNLFKSSSESKRSIKGGGVKIDSYKLVNPDLVFDSKEDLSGK--ILQIGKK 405


>gi|145257280|ref|XP_001401673.1| tyrosyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134058586|emb|CAK44622.1| unnamed protein product [Aspergillus niger]
          Length = 611

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 121/493 (24%), Positives = 205/493 (41%), Gaps = 81/493 (16%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L ERG +H +      LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 94  RKNFAQHLEERGLLHDVVGERETLDRLFTKKRVGMYAGVDPTAPSLHVGHMLPFMILAWG 153

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G     L+GG T+  GDP+ R +SR  + S   + N+  +                 
Sbjct: 154 YVWGLPVTFLLGGATARFGDPTGRLKSRDQVHSSVRKANMASMHMQLKKLGHSIDTYGRR 213

Query: 124 L----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                      ++NN TW  S+  I+LLR++G    +  M+  ++V++RL +   +SF E
Sbjct: 214 HGYINKYWRRALVNNNTWWNSLPVIELLRDLGVHTRLGPMMGRDTVKNRLSKGDGMSFAE 273

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-----RLKTPKLF------ 222
           F Y ++QA+D+  L +    ++Q+GGSDQ+GNI+ G+D  +          + F      
Sbjct: 274 FTYPLMQAWDWWVLFQ-KGVQVQVGGSDQFGNILFGMDAVKSIGKNMTDPEQQFDFKDEL 332

Query: 223 ----ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                +T+PLLT  SG K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T 
Sbjct: 333 SRPIGITTPLLTAPSGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKMFTF 392

Query: 279 LPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGR----------------------- 313
           LP+ EI ++   + +      A+  +A+E   +VHG+                       
Sbjct: 393 LPLPEIAKIMEEQNKDPSKRVAQHALASEFVELVHGKVEADAVALQHRQLFRPRLSTAEP 452

Query: 314 ---------------EEAEKAATAAMECFDMSIHSQHMPTISISKDE-VSRGMGLLTLIV 357
                            A  A   +   +    +  +MP ++I+    +     L  ++ 
Sbjct: 453 SPLPRKPSTGGSPQSPTAGFATQESGNPYAPQTNFANMPQVNITLPRSLVYNQTLNKVLW 512

Query: 358 KAGFATSTNEARRHLKSNAIKIN------NSIISNEKLQI-------KLQDFDSTGNIKL 404
            AG   S +E  R +++    +         +  +            K Q+F     + L
Sbjct: 513 SAGLVGSKSEGHRAIENRGAYVGSRPGDSGQMSDDLAFTPIKVWPAAKTQEFIIGDKLFL 572

Query: 405 SFGKKNHIICHLC 417
             GK    I  + 
Sbjct: 573 KMGKWKFKIVTIV 585


>gi|149370495|ref|ZP_01890184.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356046|gb|EDM44603.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 401

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 161/405 (39%), Gaps = 27/405 (6%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  I     L+    Q       +   +G+D TA  LH GH   L  L   Q  GH+ I 
Sbjct: 11  VEIILPENGLEEKLEQANKQQRKLIIKLGFDPTAPDLHLGHAVVLKKLKEFQDLGHQVII 70

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T+ IGDP+ +++SR+ +  +E+Q N        S  I          ++ N  WL
Sbjct: 71  LVGDFTARIGDPTGKNKSRKPLTIKEVQHNAATYIKQLSKIIDID----KVKIVFNSEWL 126

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + ++++ +    +V +++       R      ++  E  Y ILQ +D VE+     
Sbjct: 127 DKLSFTEVIQILSK-VTVAQLMHRNDFNKRFTENTPIAMHELVYPILQGFDSVEIK---- 181

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             ++MGG+DQ  N   G  L E  K      +  PLL       KM K+L+  I L    
Sbjct: 182 ADIEMGGTDQLFNCTMGRKLQENFKMDPQIVMCMPLLKGLDGKEKMSKSLNNIIGLT--- 238

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTM 309
               + +    +I D+ +  F    T    +E   +        N  E KKIIA  I T 
Sbjct: 239 DDAKDMFGKTMSIPDSLIEEFLNLTTNFSANEKQSIKDRLVAGENPMEIKKIIAKNIITQ 298

Query: 310 VHGREEAEKAATAA-MECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNE 367
            H    A++A      +  +    ++    I I+   V    + ++ L V      S + 
Sbjct: 299 YHNSALAQEAEDYFVNQFQNKKNDNKEFEPIKINTLPVENNKIKVIDLCVHLKNELSKSA 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            RR +++ A+KI+              +      +K+  GK++  
Sbjct: 359 IRRLIENGAVKIDLEKTKEIN-----NELVLQSGMKIKIGKRDFY 398


>gi|158336483|ref|YP_001517657.1| tyrosyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306724|gb|ABW28341.1| tyrosyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 404

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 173/420 (41%), Gaps = 30/420 (7%)

Query: 5   KSDFLSILSERGFIHQISN--------PRELDILCSQ--GVVTAYIGYDLTASSLHAGHL 54
            +D +S L +RG +  I             L          +   +G D T + LH GH 
Sbjct: 1   MADAVSSLLQRG-VSDIFPNNADSQQEDDNLAHRLENADQPLRIKLGIDPTGTDLHLGHS 59

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             +  L   Q  GHK + ++G  T+ +GDP+ + E RR +   E+Q NI+         +
Sbjct: 60  LPIRKLRAFQDLGHKAVLIIGDFTARVGDPTGKSEVRRQLTEAEVQHNIQTYLDQIKPIL 119

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
            + T      +  N  WL  I     L  + +  +V +ML+ E    R ++   +   EF
Sbjct: 120 DFETPD-RLEVRYNSEWLSKIDLAKTLELLTTM-TVGQMLAKEGFAERYQQGTPVYLHEF 177

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TAS 233
            Y +LQ YD V +    +  +++GG+DQ  NI  G DL         F L +P+L  T  
Sbjct: 178 LYPLLQGYDSVAV----EADVELGGTDQKFNIAIGRDLQRHFGLRPQFGLLTPILLGTDG 233

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L+  + L ++  S Y+         DA +  + + LT L + ++         
Sbjct: 234 VQKMSKSLNNYVGLAEDAVSMYS---KLEKTPDALLPEYFEHLTNLSLKDLPE------- 283

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              E +K++A  + +  H    A +   +          SQ       S  EV+    L 
Sbjct: 284 NPREQQKLLAHTVVSQYHSVAIANETQQSLAAMVTQGDMSQTDVIPEYSLAEVTFPAKLF 343

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+  +G  +S+++ARR +K  A+K++ + I+         D        L  GKK  I 
Sbjct: 344 YLLSASGLCSSSSDARRQIKGGAVKLDGTKITVVDQTYDQPDDLIG--AVLQVGKKKFIR 401


>gi|297172840|gb|ADI23803.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_47G05]
          Length = 352

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 83/350 (23%), Positives = 145/350 (41%), Gaps = 17/350 (4%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             RG    +     ++ L +   +   +G+D TA  LH GH   +  +   Q  GH+ I 
Sbjct: 17  IRRGAEEILVETELIERLENGKSLRVKVGFDPTAPDLHLGHTVLINKMRQFQDLGHEIIF 76

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T +IGDPS ++ +R  +  +EI +N    K      +       D          
Sbjct: 77  LIGDFTGMIGDPSGKNATRPALSREEIDQNALTYKEQVFKILDPDKTIVDFNSRWGSE-- 134

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                 + +  + S ++V RML  +   +R +  Q ++  EF Y ++Q YD V L     
Sbjct: 135 ---LGAEGMIRLASRYTVARMLERDDFSTRYRDGQPIAIHEFLYPLMQGYDSVALK---- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G +L ++        LT PLL       KM K+L   + + +  
Sbjct: 188 ADVELGGTDQKFNLLVGRELQKQYGLEPQIVLTMPLLEGLDGVQKMSKSLGNTVGITEP- 246

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTM 309
             P   +    +I D  +  + + L+  P+++I R       G    + K  +A EI   
Sbjct: 247 --PVEMYGKLMSISDELMWRYFELLSFRPLADIRRLQEEVTAGINPRDVKYQLAHEIVER 304

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            H   +AEKA  + +  F        +  + I  D     M +  +I  A
Sbjct: 305 FHSASDAEKAHQSFVNQFQHGEIPDEIAKVDI--DNQGNDMPVANVIKSA 352


>gi|145611092|ref|XP_368579.2| hypothetical protein MGG_00665 [Magnaporthe oryzae 70-15]
 gi|145018420|gb|EDK02699.1| hypothetical protein MGG_00665 [Magnaporthe oryzae 70-15]
          Length = 653

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 112/466 (24%), Positives = 184/466 (39%), Gaps = 57/466 (12%)

Query: 8   FLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              +  ERG +  ++ +   +  L     + AY+G D TA+SLH GHL  LM LFW+   
Sbjct: 90  LWDVFEERGLVKDVAGSREAIRELMRLKRIGAYVGIDPTAASLHLGHLVPLMPLFWMYMN 149

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-- 124
           G+  I+L+G  T+ +GDPS R   R     +   +N+  +                    
Sbjct: 150 GYTSITLLGSATAKVGDPSGRLTDREKQHREVFNKNMVSMHYQLKKIWTNVDAMARRYGY 209

Query: 125 ---------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                      NN  W      ++ L+ +GS   V  MLS ++V+ +L     LSF E  
Sbjct: 210 QEEWAWSRGQRNNNEWWNKQPLLEFLQLLGSNVRVGPMLSRDTVKRKLTEGDGLSFAELT 269

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-------------RLKTPKLF 222
           Y ++Q +D+  L K    ++Q+GGSDQ+GNI+ GI++ +                  ++ 
Sbjct: 270 YTLMQGWDWWTLYKQLGVQMQIGGSDQFGNIVQGIEVVKTVRPQQPIPGVNPESPLEEII 329

Query: 223 ALTSPLLTTASGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
             T+PLLT +SG K+GK+   G +WL+   TSPY+ + Y+    D D+    K  T +P 
Sbjct: 330 GFTTPLLTNSSGEKIGKSSGGGNLWLSNIKTSPYDLYGYFVRQPDEDMERLLKLFTFIPT 389

Query: 282 SEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------ 333
            +I  +       K    A+  +A E+  +VHG + AE                      
Sbjct: 390 KKISEIIAEHETDKPKRVAQHRLAFEVIALVHGMDVAESTQIEHKAMHGKGSVKTLFTHD 449

Query: 334 -------QHMPTI--SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN---N 381
                     P     +    + +G  +  ++  AG A S ++  R     A+ I     
Sbjct: 450 TAEQVLLNSAPEAHKKLPMKLMEKG-NVARILYAAGLAKSVSDGHRLATQQAVYIGGREG 508

Query: 382 SIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
           +      L                  +   + L  GK +  I    
Sbjct: 509 NKEMGANLCFVPIKTWFPEDTKNFLINGKFLILRKGKHDIRIIEFI 554


>gi|289621439|emb|CBI52222.1| unnamed protein product [Sordaria macrospora]
          Length = 692

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 123/489 (25%), Positives = 208/489 (42%), Gaps = 76/489 (15%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K     +  ERG++   +   E +  L     + AY+G D TA SLH GHL  LM LFW+
Sbjct: 64  KQGTWDLFKERGYVKDTAGKDEQIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 123

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G+K  +L+GG T+ IGDP+ R  SR  + S +   N+ KI        +    +  A
Sbjct: 124 YLEGYKAFTLIGGSTAKIGDPTGRLTSRDKLSSSDATMNMTKIHYQLKKLWENVDIQMRA 183

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W      +++LR +G    V  MLS ++V++++ +   +SF 
Sbjct: 184 RGYEADWARMRGIVNNNHWWNKQPMLEVLRRVGQALRVGPMLSRDTVKNKMTKGDGVSFA 243

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-----------------R 215
           EF+Y I+Q +D+ EL      ++Q+GGSDQ+GNII G+++ +                 +
Sbjct: 244 EFSYPIMQGWDWFELFYQRGVQMQIGGSDQYGNIISGLEVVKAARDSEPDPQERQHIVPK 303

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               +    T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V    K 
Sbjct: 304 TVMDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRTDEEVEKLLKL 363

Query: 276 LTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T +P SEI ++ +          A+  +A E+ T+VHG++EA  A       +   + +
Sbjct: 364 FTFMPTSEITKVMEEHVKDPSKRVAQHALAREVATLVHGQQEATAAEKQHRLMYSGQMAN 423

Query: 334 QHMPTIS---------------------------ISKDEVSRGMGLLTLIVKAGFATSTN 366
             +P +                            I  + +  G  +  ++  AG A+ST 
Sbjct: 424 PQVPRLKDAITGGDPYKVIPGQQVTWNNAPRIDMILPESLIMGKSIGRILYAAGLASSTT 483

Query: 367 EARRHLKSNAIKINN-------SIISNEKLQ-----------IKLQDFDSTGNIKLSFGK 408
           E  +   +    +         ++  +  L               +       + L  GK
Sbjct: 484 EGHKLAAAQGCYVGGAYTAGKDNVTMSPDLVSFMPVKLWFPGETQRYLIDGNLLILRKGK 543

Query: 409 KNHIICHLC 417
            N  +  + 
Sbjct: 544 HNVRVIKMV 552


>gi|291320732|ref|YP_003515997.1| tyrosyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290753068|emb|CBH41044.1| Tyrosyl tRNA synthetase 1 [Mycoplasma agalactiae]
          Length = 411

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 119/421 (28%), Positives = 212/421 (50%), Gaps = 25/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L ER  +  ISN  +     S      Y+G+D TA SLH G+   + +L   ++ 
Sbjct: 2   NILKDLEERLILKDISNKDKFAN-LSPSTTGVYVGFDPTAESLHLGNYILISVLLRFKEY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPSF+D  R ++ ++ + +N  KIK    SF        D  ++
Sbjct: 61  GFKTYAVLGGATGMIGDPSFKDSERVLLDNESVNKNKSKIKAQLESF--------DLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ++ LR +G   +V+ M++ ESV+ R+  ++ LSF EF Y +LQ +DF++
Sbjct: 113 DNYDFYKDMNVLEFLRNVGKLVNVSYMMAKESVQKRI--QKGLSFTEFTYQLLQGFDFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL-SG 243
             +    ++Q+GGSDQWGNI+ GID+  ++   K     +T  LL+  +G K+GK+   G
Sbjct: 171 TYQELGIKVQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+W++K M SP+  +QY  + +D+ +       +   +SEI+ + +         EA++ 
Sbjct: 231 ALWIDKNMCSPFKMYQYLLSQNDSRIKELLYWFSFKSVSEINEVLEKHFANPSAQEAQRF 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ-------HMPTISISKDEVSRGMGLLT 354
           +A+E+   + G  E ++A       FD S  +         +    +    + +G  ++ 
Sbjct: 291 LASEVVENIFGANELKQAKNITKILFDKSFDTSVLTLNDLEIIENYLPTCPIKQGDSVIE 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++K  F +S  EAR  +++ A+KI+N  I       +   F          GKK  I+ 
Sbjct: 351 TLIKNKFISSNREAREFIQAKALKIDNKEIE-FDTVYRPSLF-EGKYAFFKKGKKQVILL 408

Query: 415 H 415
            
Sbjct: 409 K 409


>gi|240047239|ref|YP_002960627.1| Tyrosyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984811|emb|CAT04796.1| Tyrosyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 412

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 126/429 (29%), Positives = 202/429 (47%), Gaps = 37/429 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     +FL  L  RG +  IS+  +   L     +  YIG+D TASSLH G+   + LL
Sbjct: 1   MNN--KEFLEDLQLRGILKDISDQDKFLNLEKGKKI--YIGFDPTASSLHLGNYIAINLL 56

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             L++     I+++GG T +IGDPSF  + R ++ +Q + EN  KI      F       
Sbjct: 57  QRLKQFDIPVIAVVGGATGMIGDPSFASKERVLLSNQTLLENKAKIIAQLQKF------- 109

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +  + +N      +  I+ LR+IG   ++  +L+ +S+ +R+  +  LSF EF+Y ++Q
Sbjct: 110 -NLNVFDNLEIYKDMNIIEFLRDIGKNINIAYLLAKDSIATRI--QSGLSFTEFSYQLIQ 166

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER---LKTPKLFALTSPLLTTASGTKM 237
            +DF  L +N++   Q GGSDQWGN++ G+DL ++         F +T  LLT  +G K 
Sbjct: 167 GWDFKYLYENFNVVAQAGGSDQWGNMVTGLDLIKKTVANHKQDAFVMTVNLLTDENGVKF 226

Query: 238 GKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           GKT     IWL+  M SPYN +Q+  N  DA      K L+  P+S+I+ +     +   
Sbjct: 227 GKTFGGSPIWLDANMYSPYNLYQFLFNQSDAQAEKIIKWLSFQPLSKINELIVTHNENKK 286

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
               +K +A EI   +HG+   + A   +   F  + +        IS +       +L 
Sbjct: 287 ARILQKELAHEIVANIHGKSGLKSALEISDILFGKTSYQ------EISYENKQELKKVLP 340

Query: 355 LIVKAGF----------ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L+  A F            S  E    +   A++IN   I++ ++ I     D      +
Sbjct: 341 LLSSANFSAASLIEQKVFNSKRELNEFIAQGALEINGQKIAHIEM-ISANLKDENNLFLI 399

Query: 405 SFGKKNHII 413
             GKKN  I
Sbjct: 400 KKGKKNFFI 408


>gi|46107722|ref|XP_380920.1| hypothetical protein FG00744.1 [Gibberella zeae PH-1]
          Length = 611

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 118/465 (25%), Positives = 201/465 (43%), Gaps = 57/465 (12%)

Query: 10  SILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            IL ERG+I  ++  P ++  +     + +Y+G D TA S+H GHL  +M +FW+   G+
Sbjct: 65  DILQERGYIKDVAGTPDKIKEIMRVKRIGSYVGIDPTADSMHVGHLLPMMPMFWMWFHGY 124

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT------- 121
             ++L+GG T+ IGDP+ R ESR+++ + +I +NI KI    +                 
Sbjct: 125 PAVTLIGGSTARIGDPTDRLESRQILSNADISKNITKIHLQLTRIWSNVHVLKEKYGYPN 184

Query: 122 ----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +LNN  WL ++   D  + I     +  ML+ ++V+ ++     +S  EF Y 
Sbjct: 185 DWAATHRLLNNNMWLGNLTLYDFAKRIARHTRIGPMLAKDTVKRKMTEGDGMSLGEFMYP 244

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------------TPKLFA 223
           +LQ +DF  +      ++Q+GGSDQ+GNI  GID  + ++                +   
Sbjct: 245 LLQGWDFWHMYNKLGIQMQIGGSDQYGNITAGIDALKTIRETEEAPHLKKPSTWDHEPVG 304

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
            T PLLT ASG K GK+   A+WL++  T+ ++ + Y+    D +V    K  T +PM  
Sbjct: 305 FTVPLLTDASGAKFGKSAGNAVWLDEFKTTAFDLYGYFVRRSDDEVEKLLKMFTFMPMET 364

Query: 284 IDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD---MSIHSQHMPT 338
           I  + +      +  +A+  +A ++ ++VHG E A K A      F      I  +  P 
Sbjct: 365 ISTLMEQHRANPQERKAQHALAFDVVSLVHGSERAVKEAQQHEFRFGSRLSGIAKEPSPD 424

Query: 339 ISI------SKDEVSRGMGLLTL-----IVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             I       + ++     ++ L     +   G A+S++E  R L      I        
Sbjct: 425 SGIITPNNAPRSDIKLPRSIMDLSPAKILHACGLASSSSEGNRLLSQQGAYIAAQPGQKR 484

Query: 388 KLQI---------------KLQDFDSTGNIKLSFGKKNHIICHLC 417
            L                   +       + +  GK N  I  L 
Sbjct: 485 GLVPGNLSWTPMKAWFPEETAKFLIDERMLIMRKGKHNVRIVELI 529


>gi|15828956|ref|NP_326316.1| tyrosyl-tRNA synthetase 1 (tyrosine--tRNA ligase) (TyrRS 1)
           [Mycoplasma pulmonis UAB CTIP]
 gi|81532900|sp|Q98Q81|SYY_MYCPU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14089899|emb|CAC13658.1| TYROSYL-TRNA SYNTHETASE 1 (TYROSINE--TRNA LIGASE) (TYRRS 1)
           [Mycoplasma pulmonis]
          Length = 414

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 125/425 (29%), Positives = 221/425 (52%), Gaps = 24/425 (5%)

Query: 1   MPAFK-SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M   K    +  L +R   + I++  ++D++     +  Y+G+D TA SLH G+  Q++ 
Sbjct: 1   MSQNKLKTLIEELKKRKVFNNITSEEKVDLITLDHGI--YVGFDPTAISLHLGNYIQMVN 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  G K I+++GG TS+IGDPSF+D  R+++ ++ I EN + I+    +F      
Sbjct: 59  LKRFQNVGFKTIAILGGATSMIGDPSFKDSERKLLSNETILENKKHIRKQLENF------ 112

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +++N  +   +  +D LR +G FF+V+ M+S +SV +R+  +  LSF EF+Y  L
Sbjct: 113 --GFKVIDNLDFYKDMNILDYLRSVGKFFNVSTMMSRDSVANRI--QSGLSFTEFSYQTL 168

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKM 237
           QAYDF  L +  +  +Q+GGSDQWGN++ G+D   +  +       +T  LL  ++G K+
Sbjct: 169 QAYDFKVLCEKENVMMQLGGSDQWGNLVSGLDFINKTLSKNLPTIGITMNLLVDSNGNKI 228

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           GK+  GA +W++K +TSPY  +QY  N +D D  +   +LT L +SEI+R+     K   
Sbjct: 229 GKSTGGASLWIDKTLTSPYVLYQYLLNTNDDDAYNLLLQLTFLQLSEIERIKNEHLKNPK 288

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----QHMPTISISKDEVSRG 349
               +  ++ E+   +HG+EEA++A   +   F           + +  +  S D V   
Sbjct: 289 LRLMQSRLSFEVVKDIHGKEEAQRALHISTSLFKEKNSWFNLSLEDLIQLKGSVDFVPFK 348

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V +   +S  E    ++  ++KIN   ++     +  +++     + L  GKK
Sbjct: 349 DDLFLTLVDSKIISSKREFNEFVRDKSLKINGQDVTGLDYDLPWENY-DNKYLILKKGKK 407

Query: 410 NHIIC 414
            + + 
Sbjct: 408 QYWVI 412


>gi|291458844|ref|ZP_06598234.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418098|gb|EFE91817.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 336

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 142/339 (41%), Positives = 201/339 (59%), Gaps = 8/339 (2%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPS R + RRMM   EI  N E+I+   S FI +G G   A+M NN  WL ++ ++D
Sbjct: 1   MIGDPSGRTDMRRMMSVSEIDHNCERIREQMSRFIDFGEG--KAVMANNADWLRNLNFMD 58

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            +RE+G  FSVN ML      +RL  EQ LSFLEF YM +Q YDF  L + Y C +Q GG
Sbjct: 59  FMREVGPNFSVNEMLRARCYVNRL--EQGLSFLEFCYMPMQGYDFYMLFQKYGCNMQFGG 116

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
            DQW N++ G +L  +       A+T  LLT   G KMGKT++GA+WL+ E TSPY F+Q
Sbjct: 117 DDQWSNMLAGTELIRKKLGEDAHAMTITLLTNKEGKKMGKTVNGAVWLDPEKTSPYEFYQ 176

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
           YWRN+DDADV+   K LT LP+ EI +M   +G E+N AK+I+A ++T +VHG EEA+KA
Sbjct: 177 YWRNVDDADVIKCLKLLTFLPLEEIRKMESFEGAELNRAKEILAFQLTELVHGEEEAKKA 236

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
            +AA E F     S++MPT+S+   +      + +L ++V +   +S  EARR++    +
Sbjct: 237 ESAARELFSGGGSSENMPTVSLKDTDFREDGTIDILAVLVLSKLCSSRAEARRNVVQGGV 296

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +   I +     + +DF     +    GKK+     L
Sbjct: 297 SQDGERIEDIGRSYRREDFKEG--LIFRRGKKSFAKLLL 333


>gi|227327362|ref|ZP_03831386.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 400

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 160/406 (39%), Gaps = 27/406 (6%)

Query: 18  IHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           I  +     L+            +   +G+D TA  LH GH   L  L   Q  GH  + 
Sbjct: 14  IAIMEPSNGLEKKLEQAEKENRKLIIKLGFDPTAPDLHLGHAVVLRKLKQFQDAGHDIVI 73

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T+ IGDP+ R++ R  +  ++I  N +         I      +   +  N  W 
Sbjct: 74  IIGDFTASIGDPTGRNKLRPPLSEKQIALNSQTYLDQLGRIID----TSRIQVRRNSDWF 129

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + ++L  +    ++ +M+  +  ++R      +   E  Y ILQ YD V +    +
Sbjct: 130 KKMPFSEILGLVSR-VTLAQMMQRDDFKTRYAASSPIHLHELLYPILQGYDSVMI----N 184

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N + G  L E   +     +T PLL       KM K+    I L    
Sbjct: 185 ADIELGGTDQLFNNMVGRMLQESFGSEGQSVITMPLLEGLDGKDKMSKSKGNYIALT--- 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
            SP   +    ++ D  ++S+    T +    I  + +   +  N    KK +A +I  +
Sbjct: 242 DSPEEMYGKIMSLPDHLIISYFSLATNVSAEYIIEVREQMERGKNPILIKKDLAHQIVGI 301

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  E A+ A       F     ++      I   +    + L+    +A    S +E R
Sbjct: 302 YHDAEAADAAGKHFERVFQRHNPTEEDHLPLI--VDGQAPLALIDFCSQALADMSRSELR 359

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R ++S A++IN    ++E   I  +       + L  GK +  I  
Sbjct: 360 RLIRSGAVRINTHKETDELAMINPE-----PGMLLWLGKHHRFIVR 400


>gi|317146027|ref|XP_001821240.2| tyrosyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 617

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 124/497 (24%), Positives = 212/497 (42%), Gaps = 86/497 (17%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L +RG +H +      L  + ++     Y G D TA SLH GH+   M+L W 
Sbjct: 95  RKNFAQHLEDRGLLHDVVGERELLHKVFTEKRAGMYAGVDPTAPSLHVGHMLPFMVLAWG 154

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     ++GG TS +GDP+ R + R  + S   + N+  +                +
Sbjct: 155 YVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIEQYGKR 214

Query: 116 YGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K  A    ++NN TW   + +I++LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 215 HGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAHMRLGPMLGRETVKNRLSKGDGMSFS 274

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------------RLK 217
           EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+ G+D  +                  
Sbjct: 275 EFSYPLLQAWDWWVLFK-KGVQVQVGGTDQYGNILFGMDSVKAISKNTAMEQERDPLEND 333

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 LT+PLLT  +G K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 334 IDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDVVERYLKMFT 393

Query: 278 TLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAA--------------- 320
            LP+ EI ++   + +      A+  +A E   ++HG++EA+  A               
Sbjct: 394 FLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELIHGKQEADAVALQHRQLFRSRSSTAE 453

Query: 321 ------------------------TAAMECFDMSIHSQHMPTISISKDE-VSRGMGLLTL 355
                                     +   +    +  +MP+I ++  E +  G     +
Sbjct: 454 PTPLQKNSSPPAGHAQSPTSGFVNPQSGNQYAPQTNFSNMPSIQVTLPESLVYGQNFHKI 513

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISN-----EKLQIKL---------QDFDSTGN 401
           +  AG  +S  E  R + +    +  S   +     + L             +DF   GN
Sbjct: 514 LWSAGLVSSKGEGHRIVTNKGAYV-GSRPGDSGPMSDDLAFTPILTWPAEKTKDFIVDGN 572

Query: 402 IK-LSFGKKNHIICHLC 417
           I  L  GK       + 
Sbjct: 573 ILFLKLGKWKFKTVKIV 589


>gi|238491532|ref|XP_002377003.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           [Aspergillus flavus NRRL3357]
 gi|220697416|gb|EED53757.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           [Aspergillus flavus NRRL3357]
          Length = 617

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 124/497 (24%), Positives = 212/497 (42%), Gaps = 86/497 (17%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L +RG +H +      L  + ++     Y G D TA SLH GH+   M+L W 
Sbjct: 95  RKNFAQHLEDRGLLHDVVGERELLHKVFTEKRAGMYAGVDPTAPSLHVGHMLPFMVLAWG 154

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     ++GG TS +GDP+ R + R  + S   + N+  +                +
Sbjct: 155 YVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIEQYGKR 214

Query: 116 YGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K  A    ++NN TW   + +I++LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 215 HGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAHMRLGPMLGRETVKNRLSKGDGMSFS 274

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------------RLK 217
           EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+ G+D  +                  
Sbjct: 275 EFSYPLLQAWDWWVLFK-KGVQVQVGGTDQYGNILFGMDSVKAISKNTAMEQERDPLEND 333

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 LT+PLLT  +G K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 334 IDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDVVERYLKMFT 393

Query: 278 TLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAA--------------- 320
            LP+ EI ++   + +      A+  +A E   ++HG++EA+  A               
Sbjct: 394 FLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELIHGKQEADAVALQHRQLFRSRSSTAE 453

Query: 321 ------------------------TAAMECFDMSIHSQHMPTISISKDE-VSRGMGLLTL 355
                                     +   +    +  +MP+I ++  E +  G     +
Sbjct: 454 PTPLQKNSSPPAGHAQSPTSGFVNPQSGNQYAPQTNFSNMPSIQVTLPESLVYGQNFHKI 513

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISN-----EKLQIKL---------QDFDSTGN 401
           +  AG  +S  E  R + +    +  S   +     + L             +DF   GN
Sbjct: 514 LWSAGLVSSKGEGHRIVTNKGAYV-GSRPGDSGTMSDDLAFTPILTWPAEKTKDFIVDGN 572

Query: 402 IK-LSFGKKNHIICHLC 417
           I  L  GK       + 
Sbjct: 573 ILFLKLGKWKFKTVKIV 589


>gi|169596004|ref|XP_001791426.1| hypothetical protein SNOG_00750 [Phaeosphaeria nodorum SN15]
 gi|160701208|gb|EAT92245.2| hypothetical protein SNOG_00750 [Phaeosphaeria nodorum SN15]
          Length = 539

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 139/504 (27%), Positives = 223/504 (44%), Gaps = 95/504 (18%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           LS+L ERGF+  ++  R+ LD + ++  + AY+G D TA SLH GHL   M LFW+   G
Sbjct: 2   LSVLEERGFVKDVAGERKTLDWVLTEKPIGAYVGVDPTAPSLHVGHLLPFMALFWMYLHG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT------ 121
           +   SL+GGGT+ IGDPS R  +R    +   + N + +     +               
Sbjct: 62  YNTFSLLGGGTATIGDPSGRTTARSSQAANIQRHNSKNMHIQLRNLWTNVKCLGIKHQYS 121

Query: 122 -----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                    LNNETWL  +  IDL+R +GS   +  ML+ +SV+ R++  + ++  EF+Y
Sbjct: 122 NAISWKKEPLNNETWLQQLSAIDLMRGLGSGMRLGAMLARDSVKVRMENGEGMAMSEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---------------KL 221
            + QAYD+  + +    +LQ+GGSDQ+GNI  G+D    ++                   
Sbjct: 182 PLFQAYDWWHMYQRNGVQLQIGGSDQYGNICAGMDAISYMRRAGDHHSNSELDENPLRAT 241

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           + LT+PLLTTASG K GK+   A+WL+ +M S ++ +QY+    D DV  + K  T LP+
Sbjct: 242 YGLTTPLLTTASGEKFGKSAGNAVWLDPKMLSSFDLYQYFVKTADNDVERYLKLFTFLPI 301

Query: 282 SEIDRMAKLQGKE--INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM--- 336
           ++I+ +   Q K+     A+ I+A EI  + HG + A+ A  A  E F    ++  +   
Sbjct: 302 NQINLLMAQQRKDESKRLAQHILAKEIVELAHGAKSAKMAEEAHKEAFSHGTNTFSLGAL 361

Query: 337 -----------------------------PTISISKDEVSRGMG-------LLTL----- 355
                                         ++ +S +    G         ++TL     
Sbjct: 362 RNSMSNIKPANAPNPEHLSKSEQAELAHKESLGLSANAQESGTTSALSKQKIVTLPKTLL 421

Query: 356 --------IVKAGFATSTNEARRHLKSNAIKI---N-NSIIS---------NEKLQIKLQ 394
                   +  AG A+S +EA R +      +   N  S  +              +   
Sbjct: 422 QPGSFPRILCAAGLASSRSEAHRLIACKGAYVVVPNSGSPETPTALQWINIEAGATVNPS 481

Query: 395 DFDST-GNIKLSFGKKNHIICHLC 417
            +      + L  GK    ICH+ 
Sbjct: 482 HYLVDWDALVLRSGKSKIQICHIV 505


>gi|225679779|gb|EEH18063.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1567

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 120/517 (23%), Positives = 210/517 (40%), Gaps = 104/517 (20%)

Query: 5    KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +  FL ++ ERG ++Q+  +   L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 1019 RKSFLELMEERGLVNQVVGDRDALNKMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 1078

Query: 64   QKTGHKPISLM----------------GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
               G + + L+                GG TS IGDP+ R+  R        +EN+  + 
Sbjct: 1079 YVHGIRSVFLVSTCCFYALPHYILVQLGGSTSQIGDPTDREAPRAKQARITRKENMVNMH 1138

Query: 108  GIFSSF--------IKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                 F         K+G          ++NN  W     ++++++ +G    +  ML  
Sbjct: 1139 LQLRIFGMSIERYGAKHGYAYEPIWRRAIVNNNAWWLKAPFMEVMKTMGESVRLGPMLGR 1198

Query: 157  E------------------SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +                  SV++RL+  + +S  EF Y +LQA+D+ +L +  +  +Q+G
Sbjct: 1199 DTILLGVFRTRAADTIRLCSVKNRLQSGKGMSLAEFTYPLLQAWDWWQLIQQQNILVQVG 1258

Query: 199  GSDQWGNIICGIDLGERLKTP------------------KLFALTSPLLTTASGTKMGKT 240
            GSDQ GNI  G+D  + L                     +    T+PLLTT SG K GKT
Sbjct: 1259 GSDQAGNIQFGMDATKALMKADRDYWRKHAPNPEDREILEPMGFTTPLLTTPSGEKFGKT 1318

Query: 241  LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
               A+WL+K+MT  ++ +Q++  + D +V  + K  T L +  I ++     ++     A
Sbjct: 1319 AGNAVWLDKDMTPTFDLYQFFIRVPDENVEQYLKYFTFLSIPTIKKIMVQHMEDPSKRVA 1378

Query: 299  KKIIATEITTMVHGREEAEKAATA--------AMECFDMSIHSQHMPTISISKDEVSR-- 348
            +  +A+E   ++ G  EA +A                  ++  +  P   I+  E S   
Sbjct: 1379 QHKLASEFVELMRGPAEAAQAEKDHRSLFGSLFGGQVSTALEMEARPKRDINLSETSPFR 1438

Query: 349  --------------GMGLLTLIVKAGFATSTNEARRHLKSNAIKI----NNSIISNEKLQ 390
                          G     ++  AG A+S  EA R +  N   +    ++  + ++KL 
Sbjct: 1439 VPSPHVTLPRSLVVGQFFHKVLWSAGLASSKAEAMRLILQNGAAVASRSDSKAVMDDKLS 1498

Query: 391  I----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
                         +       + L  GK    I  + 
Sbjct: 1499 YVPIKTWNKDETAKFIIDDSLLILRIGKWKVKIVKIV 1535


>gi|54020016|ref|YP_115580.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|71893418|ref|YP_278864.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|81378792|sp|Q601Y5|SYY_MYCH2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97201635|sp|Q4AAX3|SYY_MYCHJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53987189|gb|AAV27390.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|71851545|gb|AAZ44153.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 414

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 128/427 (29%), Positives = 209/427 (48%), Gaps = 23/427 (5%)

Query: 1   MPAF-KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    K +FL+ L  R  +  IS+P +   L  +     YIG+D TA+SLH G+   + L
Sbjct: 1   MSYIEKQEFLTELKTRNILKDISSPEKFFNL--KPDQGIYIGFDPTATSLHLGNYISISL 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L  LQK G K ++++GG T +IGDPSF  + R+++  + +  N EKIK    SF      
Sbjct: 59  LKRLQKIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKKQLESF------ 112

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                + +N     ++  +D LR++G   +++ +L+ ESV SR+  E  LSF EF+Y ++
Sbjct: 113 --GLPVFDNFEIYKNMNILDFLRDVGKNINISYLLAKESVASRI--EVGLSFTEFSYQLI 168

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER---LKTPKLFALTSPLLTTASGTK 236
           Q +DF  LA+NY    Q GGSDQWGN++ G+D  ++   ++  + F  T+ LLT  +G K
Sbjct: 169 QGWDFKFLAENYQIIGQAGGSDQWGNMVTGLDFIKKSNLVQKDEAFVFTTNLLTDENGQK 228

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE-- 294
            GK+L   IWL+ EM SP++ +Q+  N +D         L+ L +  I+ +      +  
Sbjct: 229 FGKSLGKPIWLDPEMYSPFHLYQFLLNQNDEQAEKIMLWLSFLDLKVINELIFKHKNDKK 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL-- 352
               +  +A E+   +HG +  + A       F+   +++      +   ++     +  
Sbjct: 289 QRILQYNLAQEVVFNIHGDKGLKIAKKITKILFEKLDYTEITFKDKLELKKIIPYFKVSF 348

Query: 353 --LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
                I+  G   S  E    +   A++IN S ISN    I  +  D +    L  GKK 
Sbjct: 349 FNANQIIDLGIFKSKRELNEFISHKALEINGSKISNIG-DITEELKDKSNLFLLRKGKKY 407

Query: 411 HIICHLC 417
             I  L 
Sbjct: 408 FFIIELI 414


>gi|253687860|ref|YP_003017050.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754438|gb|ACT12514.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 400

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 87/407 (21%), Positives = 162/407 (39%), Gaps = 29/407 (7%)

Query: 18  IHQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           I  +     L+            +   +G+D TA  LH GH   L  L   Q  GH  + 
Sbjct: 14  IAIMEPSNGLEKKLELAAKENRKLVIKLGFDPTAPDLHLGHAVVLRKLKQFQDAGHDIVI 73

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T+ IGDP+ R++ R  +  ++I  N +         I      +   +  N  W 
Sbjct: 74  IIGDFTAAIGDPTGRNKLRPPLSEKQITLNSQTYLDQLGQIID----TSRIQVRRNSEWF 129

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + +++  +    ++ +M+  +  ++R      +   E  Y ILQ YD V +    +
Sbjct: 130 RKMPFSEIIGLVSR-VTLAQMMQRDDFKNRYAASSPIHLHELLYPILQGYDSVMI----N 184

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N + G  L E   +     +T PLL       KM K+    I L    
Sbjct: 185 ADIELGGTDQLFNNMVGRMLQESFGSEGQAVMTMPLLEGLDGKDKMSKSKGNYIALT--- 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            SP + +    ++ D  ++S+    +     E D +   +  E  +   ++  ++   + 
Sbjct: 242 DSPEDIYGKIMSLPDHLIISYLTLASNAS--EEDIIEAREQMERGKNPILLKKDLAHQIV 299

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG---MGLLTLIVKAGFATSTNEA 368
           G     +AA AA + F+      + PT       +  G   + L+    +A    S +E 
Sbjct: 300 GIYHDVEAADAAGKHFERVFQQHN-PTEEDHLPLIVDGDVRLTLIDFCSQALAEMSRSEL 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR ++S A++IN     +E   I  +       + L  GK +  I  
Sbjct: 359 RRLIRSGAVRINTHKEIDELAMINPE-----PGMLLWLGKHHRFIVK 400


>gi|85118241|ref|XP_965416.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|1351183|sp|P12063|SYYM_NEUCR RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|168924|gb|AAA33620.1| tyrosyl-tRNA synthetase [Neurospora crassa]
 gi|28927224|gb|EAA36180.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|38566964|emb|CAE76265.1| tyrosine--trna ligase precursor, mitochondrial (cyt-18) [Neurospora
           crassa]
          Length = 669

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 124/489 (25%), Positives = 210/489 (42%), Gaps = 76/489 (15%)

Query: 5   KSDFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K +   +  ERG++   +     +  L     + AY+G D TA SLH GHL  LM LFW+
Sbjct: 64  KQNTWDLFEERGYVKDTAGTKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 123

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G+K  +L+GG T+ IGDP+ R +SR  + S +   N+ KI        +    +  A
Sbjct: 124 YLEGYKAFTLIGGSTAKIGDPTGRLKSRDHLSSSDATMNMTKIHYQLKKLWENVDTQMRA 183

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W      +++LR +G    +  MLS ++V++++ +   +SF 
Sbjct: 184 RGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFA 243

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-----------------R 215
           EF Y I+Q +D+ EL      ++Q+GGSDQ+GNII G+++ +                 +
Sbjct: 244 EFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPK 303

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               +    T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V +  K 
Sbjct: 304 TALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKL 363

Query: 276 LTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECF------ 327
            T +P+SEI +  +          A+  +A E+ T+VHG++EA  A       +      
Sbjct: 364 FTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQHRMMYTGQMTI 423

Query: 328 --------------------DMSIHSQHMPTIS-ISKDEVSRGMGLLTLIVKAGFATSTN 366
                               D  +   + P I  I  + +  G  +  ++  AG A+ST 
Sbjct: 424 PQVSRAKDAATGGDQYKTISDQPVTLNNAPRIDMILPESLIMGKSIGRILYAAGLASSTT 483

Query: 367 EARRHLKSNAIKI------NNSIIS-NEKLQ-----------IKLQDFDSTGNIKLSFGK 408
           E  +   +    +          ++ N  L               +   +   + L  GK
Sbjct: 484 EGHKLAAAQGCYVGGAHRAGGENVTMNPDLISFMPVKLWFPGETQRYLINGNLLILRKGK 543

Query: 409 KNHIICHLC 417
            N  +  + 
Sbjct: 544 HNVRVIQMV 552


>gi|72080405|ref|YP_287463.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|97201630|sp|Q4A8U9|SYY_MYCH7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71913529|gb|AAZ53440.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 414

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 128/427 (29%), Positives = 208/427 (48%), Gaps = 23/427 (5%)

Query: 1   MPAF-KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    K +FL+ L  R  +  IS+P +   L  +     YIG+D TA+SLH G+   + L
Sbjct: 1   MSYIEKQEFLAELKTRNILKDISSPEKFFNL--KPDQGIYIGFDPTATSLHLGNYISISL 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L  LQK G K ++++GG T +IGDPSF  + R+++  + +  N EKIK    SF      
Sbjct: 59  LKRLQKIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKKQLESF------ 112

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                + +N     ++  +D LR++G   +++ +L+ ESV SR+  E  LSF EF+Y ++
Sbjct: 113 --GLPVFDNFEIYKNMNILDFLRDVGKNINISYLLAKESVASRI--EVGLSFTEFSYQLI 168

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER---LKTPKLFALTSPLLTTASGTK 236
           Q +DF  LA+NY    Q GGSDQWGN++ G+D  ++    +  + F  T+ LLT  +G K
Sbjct: 169 QGWDFKFLAENYRIIGQAGGSDQWGNMVTGLDFIKKSNLDQKDEAFVFTTNLLTDENGQK 228

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKE 294
            GK+L   IWL+ EM SP++ +Q+  N  D         L+ L +  I+ +       K+
Sbjct: 229 FGKSLGKPIWLDPEMYSPFHLYQFLLNQSDEQAEKIMLWLSFLDLKVINELIFKHKKDKK 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL-- 352
               +  +A ++   +HG +  E A       F+   +++      +   ++     +  
Sbjct: 289 QRILQYNLAKQVVFDIHGDKGLEIAKKITKILFEKLDYTKITFNDKLELKKIIPYFKVSF 348

Query: 353 --LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
                I+  G   S  E    +   A++IN S ISN    I  +  D +    L  GKK 
Sbjct: 349 FNANQIIDLGIFKSKRELNEFISHKALEINGSKISNIS-DITEELKDKSNLFLLRKGKKY 407

Query: 411 HIICHLC 417
             +  L 
Sbjct: 408 FFMIELI 414


>gi|116182242|ref|XP_001220970.1| hypothetical protein CHGG_01749 [Chaetomium globosum CBS 148.51]
 gi|88186046|gb|EAQ93514.1| hypothetical protein CHGG_01749 [Chaetomium globosum CBS 148.51]
          Length = 708

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 124/479 (25%), Positives = 205/479 (42%), Gaps = 68/479 (14%)

Query: 7   DFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +   +L ERG++  I+ +   +  +     V AY+G D TASSLH GHL  LM LFW+  
Sbjct: 63  NTWDMLEERGYVKDIAGSRETIREMMRLKRVKAYVGVDPTASSLHVGHLLPLMPLFWMYM 122

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYG 117
            G+   +L+GG T  IGDP+ R + R  +   ++  N+ K+                +YG
Sbjct: 123 HGYGAFTLLGGSTVKIGDPTDRLKDREPIAKADLAMNVTKVHFQLKKLWANVETQARRYG 182

Query: 118 TGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
             K  A    ++NN TW  S+  +++LR  G    +  MLS E+V+ ++     +SF EF
Sbjct: 183 YEKEWAWQRAVVNNNTWWNSVTLLEVLRRAGRHMRIGPMLSRETVKRKMSEGDGMSFAEF 242

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG---------------ERLKTP 219
            Y I+Q +D+  L      ++Q+GGSDQ+GNI+ G+D+                      
Sbjct: 243 TYPIMQGWDWWTLFNQQKVQMQIGGSDQYGNIVAGVDIVKTVRDTEPDEARRIPRDGPID 302

Query: 220 KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
                T PLL  +SG K GK+   A+WL+  MTS ++ + Y+    D DV    K  T +
Sbjct: 303 DPAGFTVPLLLDSSGVKFGKSAGNAVWLDHFMTSTFDLYGYFVRRPDDDVEKLLKLFTFM 362

Query: 280 PMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD--------- 328
           P+  I ++   +++      A+  +A E+ T+VHG E A++A       ++         
Sbjct: 363 PLEAIQKVMAQQMEDPSKRVAQHCLAYEVLTLVHGEEAAKEAREQHQMMYNKVPLPVVAG 422

Query: 329 ----------MSIHSQHMPTISISKDE-VSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
                           + P I +     +  G  +  ++  AG A+ST++  R     A 
Sbjct: 423 APGAEYEPPVGPTTLNNAPRIDMRLPRSLIMGKSIGRILYAAGLASSTSDGHRLAAQKAA 482

Query: 378 KIN---------NSIISNEKLQIKL----------QDFDSTGNIKLSFGKKNHIICHLC 417
            I             ++  +L              +       + L  GK N  I  + 
Sbjct: 483 YIGGLPGRRPGKGEPMNPSQLTWNPVTLWFPQETGKYLIDDKLLILRKGKHNVRIIQVI 541


>gi|288918516|ref|ZP_06412866.1| tyrosyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288350035|gb|EFC84262.1| tyrosyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 408

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 160/409 (39%), Gaps = 21/409 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            LS    R     ++       L S   +    G DLTA  LH GH   L +   LQ  G
Sbjct: 13  LLSEF-ARTTDEILTLEELRTRLLSGRQLIMKYGVDLTAPHLHIGHAVNLWMYRALQDLG 71

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T+ IGDP+ + ++R ++  +EI+ N ++I+   +  ++      +     
Sbjct: 72  HRVVLLLGDFTTQIGDPTGKSKTRPVLAREEIEANAKQIQEQATRVLRTDPELLEIRP-- 129

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL +      L  + S  +V+R+LS +  R R+   QS++  E  Y I+Q +D V L
Sbjct: 130 NSEWL-NAMTPSELLTVMSRVTVDRLLSRDMFRKRMSEGQSIAAHELVYPIIQGWDSVCL 188

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  L + GSDQ  N + G  L E+        +T+ +      G K  K+L   + 
Sbjct: 189 R----ADLTIIGSDQLFNEMMGRSLQEKEGQAPQVVITTKITPGIDGGEKQSKSLGNYVA 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           +N    SP   +     + D  V  +    + LP   I  +   Q     EAK  +AT I
Sbjct: 245 INH---SPREKFGRLMRVPDQYVGQYLTVYSDLPEDAIRAVLSKQETAPIEAKYDMATAI 301

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI-VKAGFATST 365
            T   G   A       +  F           + +        M +L L+    G   S 
Sbjct: 302 VTRWDGEAAAAAERDWFITTFSRRQVPADAEHVVLDTA----SMKVLDLMRTLLGAGPSN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            + RR ++   + + +  I +    +       +  + +  GK+     
Sbjct: 358 GDLRRLIQQGGVTVGDDRIDDTDAVVT----VGSEPVPVKLGKRRWFQV 402


>gi|168701261|ref|ZP_02733538.1| tyrosyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 404

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 95/403 (23%), Positives = 169/403 (41%), Gaps = 36/403 (8%)

Query: 25  RELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
            EL     +       +    G D T   +H GH   L  L   Q+ GH  + ++G  T+
Sbjct: 26  EELKKKLEKSFTSGKPLRVKYGIDPTGFDVHLGHTVPLRKLRQFQEFGHTAVLIIGTATA 85

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +GDPS RD SR+ + +++I +N +      +  +      + A +  N  W     + D
Sbjct: 86  AVGDPSGRDASRQGLTTEQIDKNAQTYLTQIAKVVD----VSKAEVRPNGEWFSKFTFAD 141

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L+ +G   ++ RM+  +    R+K   ++   E  Y ++Q +D VE+       +++GG
Sbjct: 142 MLKLLG-HTTMQRMIERDDFTKRIKAGAAIYLHECLYPLMQGHDSVEIR----ADVELGG 196

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           ++Q  N++ G DL           LT P+L  T    KMGK++   I LN+      + +
Sbjct: 197 TEQLYNLMVGRDLQRAAGQEPQICLTMPILRGTDGEKKMGKSVGNYIGLNEP---AKDMF 253

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                I D  +  +   LT     ++ R+         EAKK +A +I    HG E A  
Sbjct: 254 GKTMRIHDELLTEWYALLTDRSHEDVTRLLTTPL----EAKKTLAADIVRFYHGEEVASA 309

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGL-LTLIVKAGFATSTNEARRHLKSNAI 377
                      +I   ++  ISI  D++  G  L + LI +     S +EARR ++  A 
Sbjct: 310 TRADWDN-AAKNIDPVNIDDISIPADKIKDGAMLAVDLIAETKLTASKSEARRKIEEGAF 368

Query: 378 KIN----NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             N     +  ++ K  + + D      + +  G +  +   L
Sbjct: 369 --NYGPGRTKPADVKATVPVTD-----GLVIRLG-RKILRVRL 403


>gi|298243236|ref|ZP_06967043.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297556290|gb|EFH90154.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 407

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 171/406 (42%), Gaps = 18/406 (4%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ER      S      ++ S   +    G D+TA  LH GH   L ++  +Q  GHK I L
Sbjct: 18  ERTSEEWFSLEEFQRLMRSGRQLRIKYGVDVTAPFLHLGHAVNLWMMRKMQDLGHKVIFL 77

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T+ IGDP+ R++ R ++  +EI+ N +         +++       +  N   W  
Sbjct: 78  IGDFTTTIGDPTGRNKLRPIIPPEEIEANAQAFIAQARMVLRFDDQHLLEIRRN-SEWYK 136

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +   +LL  + S  + +R++  +  + RLK+   +   E  Y +LQ YD   L    D 
Sbjct: 137 DMPVQELL-RLLSMITHSRLIVRDMFQLRLKQGLDIHMHELLYPVLQGYDSFAL----DS 191

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            L + GSDQ  N + G    E L       +T+ +        K  K+L   I L     
Sbjct: 192 DLTIIGSDQLFNELMGRFYQEHLGQSPQVVITTKITPGIDGKAKQSKSLGNYIGLGH--- 248

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
           SP + +     + D+ +V++ +  T +PM +++ + +   +E  + K  +A EI    HG
Sbjct: 249 SPRDKFGRAMKLPDSLIVTYFEIYTDIPMIDVEEIGQRVEQEPMQCKLRLAYEIVKRYHG 308

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           +E AE+      E F      + +P +++ +  +   + LL L        S  E RR  
Sbjct: 309 KEVAEQEFFWFQETFSARQTPEDIPEMTLERG-IQTPLELLKLFFNGQ--KSNRELRRLC 365

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +   +  N  ++   +  ++L D D         GK+      + G
Sbjct: 366 EQGGVSRNEEVLRQPEQMLELCDGD-----VFHVGKRTWFRVRVSG 406


>gi|196230468|ref|ZP_03129330.1| tyrosyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196225398|gb|EDY19906.1| tyrosyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 390

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 90/413 (21%), Positives = 160/413 (38%), Gaps = 38/413 (9%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL  RG    I+    L  L     +   +G D TA  +H G    L  L   Q  GH
Sbjct: 8   LEILK-RGAAQIINEAELLAKLRLGRPLNVKLGVDPTAPDIHLGFTVALTKLRQFQDLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I ++G  T++IGDPS R ++R  +   ++  N    +      +           + N
Sbjct: 67  QAILIIGDFTAMIGDPSGRSKARPQLTHDQVMNNARSFQEQAYKILDP----ERTRTVFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   + + ++++  G   ++ +ML  E  ++RL+R  ++   E  Y I+Q +D V + 
Sbjct: 123 GQWFEMMTFEEVIKLNGR-VTLQQMLQREDFKNRLERGDAVHLHEIQYPIMQGWDSVVVK 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWL 247
                 +++GG+DQ  NI+ G DL      P+      PLL       KM K+L   + +
Sbjct: 182 ----ADVEIGGTDQLFNILVGRDLQREEGQPQQIVFLMPLLEGLDGVQKMSKSLGNYVGV 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           ++    P   +    +I D  +  +   L             +      +AKK +A  I 
Sbjct: 238 SEA---PTEMFGKLMSITDTLMARYYLLLL---------GEDVPDIHPMDAKKQLARRIV 285

Query: 308 TMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIVK-----AGF 361
              HG E    A       F      +   P +  +         +++++V         
Sbjct: 286 ARYHGEEAGNAALEDFNTKFSKRDVENAEWPVVDFAGV----NQDIVSIVVAGYEKGYQI 341

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A S  +ARR ++  +I+++   I++ K    L          L   KK  +  
Sbjct: 342 AKSRGDARRLVEQGSIQLHEEKITDPKATPTLA-----AGTVLKLDKKRAVRV 389


>gi|310789952|gb|EFQ25485.1| tRNA synthetase class I [Glomerella graminicola M1.001]
          Length = 636

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 111/486 (22%), Positives = 203/486 (41%), Gaps = 75/486 (15%)

Query: 7   DFLSILSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +   I  ERG++  ++    ++  L     + AY+G D TA+SLH GHL   M LFW+  
Sbjct: 65  NIWDIFEERGYVKDVAGRTPQIKELLRTKRIGAYVGVDPTAASLHVGHLLPFMPLFWMHL 124

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG------ 119
            G+  +SL+GG T  IGDP+ R ++R +M + E+  NI KI                   
Sbjct: 125 HGYTAVSLVGGATGRIGDPTDRLKTREVMANSEVSMNITKIHYQLKKIWSNVEALGRKYG 184

Query: 120 -----KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                     ++NN  W   +   D+++ +G +  +  MLS ++V++++++   +S  EF
Sbjct: 185 KEPEWAGKKHLVNNNMWWQGLPLYDVMKRLGRYMRIGPMLSRDTVKNKMEKGDGMSLAEF 244

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------------TPK 220
            Y ++Q +DF  L      ++Q+GGSDQ+GNI+ GI+  + ++                 
Sbjct: 245 IYPLMQGWDFWHLYSKLGVQMQIGGSDQFGNIVTGIEAVKTIRSSEENPNMRMPDTWKDD 304

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
               T PLLT  +GTK GK+   A+WL+  MTS ++ + Y+    D +V    K  T LP
Sbjct: 305 PIGFTVPLLTDNAGTKFGKSAGNAVWLDPFMTSAFDLYGYFARRPDNEVEKLLKLFTFLP 364

Query: 281 MSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
            + I+++            A+  +A E+ ++VHG + A +        F    ++  +  
Sbjct: 365 TTSIEKLMIEHAQDPPKRVAQHTLAFEVLSLVHGADVAIREQQQHQFMFSKGGNAAQIAG 424

Query: 339 ISISKDEVSR-------------------------------GMGLLTLIVKAGFATSTNE 367
            + + +E                                    G+  ++  AG A+S +E
Sbjct: 425 ATGASEEGQDFLAPYKAIEGHPTTLNNAPKMDMQLPENLIYNQGIARILYAAGLASSVSE 484

Query: 368 ARRHLKSNAIKINNSIISNEKLQIK----------------LQDFDSTGNIKLSFGKKNH 411
             R  ++    +  +   + +  +                  +       + +  GK N 
Sbjct: 485 GHRIARAQGAYVAAAPGKDMRGLVPGNLDWTPVKLWYPQDVPKFLIDGRLLIIRKGKHNV 544

Query: 412 IICHLC 417
            I  + 
Sbjct: 545 RIIEVV 550


>gi|304372917|ref|YP_003856126.1| Tyrosyl tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309108|gb|ADM21588.1| Tyrosyl tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|330723495|gb|AEC45865.1| tyrosyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 418

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 117/425 (27%), Positives = 207/425 (48%), Gaps = 28/425 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + L  +  RG +  IS+ ++L  +     +  Y+G+D TA SLH G+   + L    Q
Sbjct: 4   KEELLKEIKLRGILKDISDEKKLLNMRQNEGI--YVGFDPTAKSLHLGNYILINLAQRFQ 61

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G K I+++GG T +IGDPSF  + R ++ ++ I +N   IK     F        D  
Sbjct: 62  RAGVKTIAVLGGATGMIGDPSFVSKERVLLSNEAIIKNKNYIKAQLEKF--------DLQ 113

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + +N      +  +D LR++G   +V  +L+ +S+ SR+  +  LSF EF+Y ++QA+DF
Sbjct: 114 VFDNFDIYKDMNVLDFLRDVGKNVNVALLLTKDSIASRI--KTGLSFTEFSYQLIQAWDF 171

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-----KLFALTSPLLTTASGTKMGK 239
             L   ++   Q+GGSDQWGNI+ G+D+ ++           F LT+ LLT  +G K GK
Sbjct: 172 KYLFDKFNIVGQLGGSDQWGNIVQGLDMIKKTSLEDKNSSPCFGLTTQLLTDENGNKFGK 231

Query: 240 TLS--GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           T     A+WL+  +TSP+  +Q+  N+ D     F K  +    SEI+++ +   +   E
Sbjct: 232 TTFDGDALWLDSNLTSPFKLYQFLINLSDFQAEKFFKWTSFKTFSEIEKILQKHSQNKKE 291

Query: 298 --AKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRG 349
              +  +  EI   +HG++  E+    +   F        +     +   SI    +   
Sbjct: 292 KFLQHQMTQEIILNLHGQKTLEQCLKISSLLFKNLSFELLNQADLDLLAKSIDNFVLQES 351

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
                 +V+    +S  E    +K +A+++N  II +++ +I  +   +   + +  GKK
Sbjct: 352 EFNANKLVELKIFSSKRELNEFIKDSALQVNGQIIKSQE-EINSKLKQNFSKLLIKKGKK 410

Query: 410 NHIIC 414
           N  + 
Sbjct: 411 NFFVV 415


>gi|213409600|ref|XP_002175570.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003617|gb|EEB09277.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 444

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 125/449 (27%), Positives = 205/449 (45%), Gaps = 45/449 (10%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP F+      LS RG + Q +      +  S  +   Y G D TA+SLH G+L   M L
Sbjct: 1   MPVFQP-LWKQLSLRGLVAQTA-----RVQASTNITGVYTGVDPTANSLHLGNLVAFMPL 54

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG--- 117
           F     G    +L+G  T+ +GDP+ R ESR  +  +   EN   +    S   +     
Sbjct: 55  FHAYLNGFPSFALVGDATAQLGDPTGRTESRTRLSKRVFSENTSALVNQLSFLSQRVVSY 114

Query: 118 -----------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                        + +  ++ N +W   +  +D L +IGS   VN+ML+ +SV SRL+  
Sbjct: 115 ARYCDYSTTDTPDERNWHIVQNSSWYSGMGLLDFLNKIGSTARVNQMLARDSVSSRLRSP 174

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALT 225
             LSF EF Y +LQAYDF  LA + +  LQ+GG+DQWGN+  G+D    +L   K FALT
Sbjct: 175 TGLSFSEFTYQLLQAYDFYYLATHSNVNLQIGGNDQWGNVTAGVDFVHRKLGDNKAFALT 234

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +PLLTT++G K GK+   A+W++K  T  Y  +Q++ ++ D  +    K+LT L +  I 
Sbjct: 235 TPLLTTSNGVKFGKSTGNAVWIDKTKTDAYALYQFFVSLPDKMIPILLKQLTFLSVERIG 294

Query: 286 RMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAAT-----AAMECFDMSIHSQHMPT 338
            + +      E     + +A+ +   +HG++  + A        A +      +    P 
Sbjct: 295 ELEQQHSRKPEDRLLHRALASHVVYFLHGKDAVDTAIKVSNILYASKRNAQGFYWPPEPD 354

Query: 339 IS--------------ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                           +      + + +  L+ + G   S  EA   +++  + + N I+
Sbjct: 355 YGNHSLKDLLQKTSAFVKIPRAIQSLPVCRLLRECGLFNSRKEASDCIENGKVMLGNEIL 414

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +  L     +F     + L FGKK + +
Sbjct: 415 KDSNLI---TNFPPESLVCLRFGKKAYAL 440


>gi|326473229|gb|EGD97238.1| tyrosyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477691|gb|EGE01701.1| tyrosyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 597

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 128/490 (26%), Positives = 199/490 (40%), Gaps = 78/490 (15%)

Query: 5   KSDFLSILSERGFIHQIS--NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +  FLS++ ERG IH +   +   LD + +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  RQSFLSLMEERGLIHSVIGGDRDALDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------I 114
               G K + L+GG TS +GDP+ R  +R ++ +   +  I  +                
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPVLSNASRKAYIANMHMQLKKLGASFERYGG 139

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW      ID+L  +G    +  ML  E V++RL+    +SF
Sbjct: 140 KHGYSWEWAWRRALENNNTWWNKETLIDVLAILGQHARIGTMLGREPVKTRLESGSGMSF 199

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----------- 220
            EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID  +++               
Sbjct: 200 TEFCYPIMQAWDWWHLYQ-KGVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDPE 258

Query: 221 ---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T
Sbjct: 259 LSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFT 318

Query: 278 TLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVH---GREEAEKAATAAMECFDMSIH 332
            LP S I  + +          A+  +A E   +VH     EEA KA  A  +    +  
Sbjct: 319 FLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIFQPQGSAST 378

Query: 333 SQHMPTISISKDEVSRGMG-------------------------------LLTLIVKAGF 361
                +I +S   +   +                                   ++  AG 
Sbjct: 379 KSDSKSIPLSPSGIPEFINAGVNKKAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGM 438

Query: 362 ATSTNEARRHLKSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFG 407
            +S  E  R + +N   +         + +             +  +       + L  G
Sbjct: 439 VSSKQEGHRIIVNNGASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIG 498

Query: 408 KKNHIICHLC 417
           K    I  + 
Sbjct: 499 KWRVKIIKVI 508


>gi|148377992|ref|YP_001256868.1| tyrosyl-tRNA synthetase 1 [Mycoplasma agalactiae PG2]
 gi|254783618|sp|A5IZH1|SYY_MYCAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148292038|emb|CAL59430.1| Tyrosyl tRNA synthetase 1 [Mycoplasma agalactiae PG2]
          Length = 411

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 208/421 (49%), Gaps = 25/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L ER  +  ISN  +     S      Y+G+D TA SLH G+   + +L   ++ 
Sbjct: 2   NILKDLEERLILKDISNKDKFAN-LSPSTTGVYVGFDPTAESLHLGNYILISVLLRFKEY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPSF+D  R ++ ++ + +N  KIK    SF           ++
Sbjct: 61  GFKTYAVLGGATGMIGDPSFKDSERVLLDNESVNKNKSKIKAQLESF--------GLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ++ LR +G   +V+ M++ ESV+ R+  ++ LSF EF Y +LQ +DF++
Sbjct: 113 DNYDFYKDMNVLEFLRNVGKLVNVSYMMAKESVQKRI--QKGLSFTEFTYQLLQGFDFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL-SG 243
             +    ++Q+GGSDQWGNI+ GID+  ++   K     +T  LL+  +G K+GK+   G
Sbjct: 171 TYQELGVKVQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A+W++K M SP+  +QY  +  D+ +       +   +SEI+ + +         EA++ 
Sbjct: 231 ALWIDKNMCSPFKMYQYLLSQKDSRIKELLYWFSFKSVSEINEVLEKHFANPSTQEAQRF 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ-------HMPTISISKDEVSRGMGLLT 354
           +A+E+   + G  E ++A       FD S  +         +    +    + +G  ++ 
Sbjct: 291 LASEVVENIFGANELKQAKNITKILFDKSFDASVLTLNDLEIIENYLPTCPIRQGDSVIE 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++K  F  S  EAR  +++ A+KI+N  I           F          GKK  I+ 
Sbjct: 351 TLIKNKFIVSNREAREFIQAKALKIDNKEIE-FDSIYSPSLF-EGKYAFFKKGKKQVILF 408

Query: 415 H 415
            
Sbjct: 409 K 409


>gi|322705582|gb|EFY97167.1| tyrosyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 556

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 111/452 (24%), Positives = 183/452 (40%), Gaps = 56/452 (12%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           S P ++  +     + AY+G D TA SLH GHL   M LFWL   G+  ++L+GG T+ I
Sbjct: 14  STPDKIKEVMRIKRIGAYVGVDPTADSLHIGHLLPFMPLFWLWFHGYPAVTLLGGATARI 73

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT-----------DALMLNNET 130
           GDP+ R +SR  M + EI +N+ KI    +   +                    +LNN  
Sbjct: 74  GDPTGRLQSREHMPNSEISKNVTKIHYQLTRLWRNVVALREKYGYEKDWAAKRHLLNNNM 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   D  + +     +  MLS E+V+ ++     +S  EF Y + Q +DF  +   
Sbjct: 134 WLQGLSVYDFTKRLARNTRIGPMLSRETVKRKMTEGDGMSLGEFMYPLFQGWDFWHMYNK 193

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK--------------TPKLFALTSPLLTTASGTK 236
              ++Q+GGSDQ+GNI+ GID  + ++                +    T PLL  ++G K
Sbjct: 194 LGVQMQIGGSDQYGNIVAGIDALKVIRDSEEAPHAKMPTEWQHEPMGFTVPLLLDSAGAK 253

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKE 294
            GK+   A+WL++  TSP+  + Y+    D +V    K  T +PM++I            
Sbjct: 254 FGKSAGNAVWLDEFKTSPFELYGYFMRRPDDEVEKLLKLFTFMPMAQIQETMTQHCADPS 313

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTIS 340
              A+  +A E+ ++V+G + A + A      F   +                 + P   
Sbjct: 314 KRVAQHTLAFEVLSLVYGSQRALQEAQQHKFRFGGELPHVINEPSKDSGIVTPNNAPRSD 373

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI--------- 391
           I        +    L+   G A+S ++ +R +      +         L           
Sbjct: 374 IQLPRSVMKLSPAKLLFATGLASSNSDGQRLVSQQGAYVAAQPGQTRGLVPGNLSWTPMK 433

Query: 392 ------KLQDFDSTGNIKLSFGKKNHIICHLC 417
                   +       + L  GK N  I  L 
Sbjct: 434 MWFPEETAKYLIDEKILILRKGKHNVRIVELV 465


>gi|315051842|ref|XP_003175295.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340610|gb|EFQ99812.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 597

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 127/490 (25%), Positives = 197/490 (40%), Gaps = 78/490 (15%)

Query: 5   KSDFLSILSERGFIHQIS--NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           K  FLS + ERG IH +   +   LD + +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  KQSFLSFMEERGLIHSVIGGDRDALDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------I 114
               G K + L+GG TS +GDP+ R  +R ++ +   +  I  +                
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPLLSNASRKAYIANMHMQLKKLGASFERYGG 139

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW      ID+L  +G    +  ML  E V++RL+    +SF
Sbjct: 140 KHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSF 199

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----------- 220
            EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID  +++               
Sbjct: 200 TEFCYPIMQAWDWWHLYQ-KGVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDPE 258

Query: 221 ---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T
Sbjct: 259 LSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFT 318

Query: 278 TLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVH---GREEAEKAATAAMECFDMSIH 332
            LP   I  + +          A+  +A E   +VH     E+A KA  A  +    +  
Sbjct: 319 FLPTVRIHEIIEEHNKEPSRRIAQHALAQEFVELVHGPKEAEDASKAHKAIFQPQGSAST 378

Query: 333 SQHMPTISISKDEVSRGMG-------------------------------LLTLIVKAGF 361
                +I +S   +   +                                   ++  AG 
Sbjct: 379 KSDTKSIPLSPSGIPEFINAGVNKNAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGM 438

Query: 362 ATSTNEARRHLKSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFG 407
            +S  E  R + +N   +         + +             +  +       + L  G
Sbjct: 439 VSSKQEGHRIIVNNGASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIG 498

Query: 408 KKNHIICHLC 417
           K    I  + 
Sbjct: 499 KWRVKIIKVI 508


>gi|254431353|ref|ZP_05045056.1| tyrosyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625806|gb|EDY38365.1| tyrosyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 437

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 86/399 (21%), Positives = 152/399 (38%), Gaps = 34/399 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 60  NDRPLRVKLGIDPTGADIHLGHSLLFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSSTR 119

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             + + E++ N E              S + + T     +  N   WL  +    ++  +
Sbjct: 120 VQLSAAEVEANAETYLLQLGLGQSRDQSLLDFETPGRLEVRRN-SEWLAGLALPQVIELL 178

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G+  +V +ML+ +    R      +S  EF Y +LQ YD V +       +++GG+DQ  
Sbjct: 179 GT-STVGQMLAKDDFSKRYGSGTPISLHEFLYPLLQGYDSVAIQ----ADVELGGTDQKF 233

Query: 205 NIICGIDLGERLKTPKLF-ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F  L   L       KM K+L   + L ++  S Y+       
Sbjct: 234 NVAMGRDLQRHFGQRPQFGLLLPILPGLDGVQKMSKSLGNTVGLREDPLSMYS---KLEK 290

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + DA V +             D   +       E +K +A +IT   HG   A++A   A
Sbjct: 291 VPDAVVDT-------YLTLLTDLDLRALPPNPRERQKAMALDITRQRHGASAADQAQRDA 343

Query: 324 ME----CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                        +  +P  S++   V+       L+   G   S++EARR ++   +++
Sbjct: 344 ATLVGAAAGQHAAAAAVPEASLAA--VNFPARAFYLLSALGLCGSSSEARRQIQGGGVRL 401

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +   + +                 +  GKK      L G
Sbjct: 402 DGVKLVDPNQTFASAADLEGK--VIQLGKKTFR--RLVG 436


>gi|327296445|ref|XP_003232917.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465228|gb|EGD90681.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 597

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 127/490 (25%), Positives = 196/490 (40%), Gaps = 78/490 (15%)

Query: 5   KSDFLSILSERGFIHQIS--NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +  FLS + ERG IH +   +   LD L +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  RQSFLSFMEERGLIHSVIGGDRDALDKLITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------I 114
               G K + L+GG TS +GDP+ R  +R ++ +   +  I  +                
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPVLSNASRKAYIANMHMQLKKLGASFERYGG 139

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW      ID+L  +G    +  ML  E V++RL+    +SF
Sbjct: 140 KHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSF 199

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----------- 220
            EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID  +++               
Sbjct: 200 TEFCYPIMQAWDWWHLYQ-KGVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDPD 258

Query: 221 ---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+       T
Sbjct: 259 LSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLNMFT 318

Query: 278 TLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVH---GREEAEKAATAAMECFDMSIH 332
            LP S I  + +          A+  +A E   +VH     EEA KA  A  +    +  
Sbjct: 319 FLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIFQPQGSAST 378

Query: 333 SQHMPTISISKDEVSRGMG-------------------------------LLTLIVKAGF 361
                +I +    +   +                                   ++  AG 
Sbjct: 379 KSDSKSIPLLPSGIPEFINAGVNKKAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGM 438

Query: 362 ATSTNEARRHLKSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFG 407
            +S  E  R + +N   +         + +             +  +       + L  G
Sbjct: 439 VSSKQEGHRIIVNNGASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIG 498

Query: 408 KKNHIICHLC 417
           K    I  + 
Sbjct: 499 KWRVKIIKVI 508


>gi|71022055|ref|XP_761258.1| hypothetical protein UM05111.1 [Ustilago maydis 521]
 gi|46097752|gb|EAK82985.1| hypothetical protein UM05111.1 [Ustilago maydis 521]
          Length = 543

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 121/473 (25%), Positives = 187/473 (39%), Gaps = 72/473 (15%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +S L  R  I  +++        S      Y G D +A SLH G+L  L+ L    + 
Sbjct: 61  DLISELESRNLIAHVTSRSL-RSHLSSAPRIVYSGVDPSADSLHVGNLLPLLTLAHFARH 119

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK------ 120
            H PI L+GG T  IGDPS R   R  +    +  N+  I      F  +          
Sbjct: 120 RHHPIVLVGGATGSIGDPSGRSTERNALSKDVLHRNVAAITQQVGKFFNHVQEYYAESTG 179

Query: 121 --------------------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                                   M+NN  W+  +  +D L  +G    + +ML+ +SV 
Sbjct: 180 ERFAVDNHTEDKEREASRLGMGIRMMNNYEWMKDVSLLDFLGGVGRHARLTQMLARDSVA 239

Query: 161 SRLKREQ------------SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           SRL                 +S+ EF+Y +LQAYDF  L  ++ C +Q+GGSDQ GNI  
Sbjct: 240 SRLAPATSTGSSSAANGGGGMSYTEFSYQLLQAYDFSFLHTHHACTIQIGGSDQLGNITA 299

Query: 209 GIDLGERLK-----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           GIDL  R       T   + LT PLLTT +G K GK+   A+WL++  TS +  +Q++  
Sbjct: 300 GIDLIRRTSSTSLLTDPAYGLTLPLLTTCTGEKFGKSAGNAVWLSRSKTSDWALYQFFVR 359

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAAT 321
             DADV  +   LT L    +  + +   +     +A+ ++A  +T ++ G    ++   
Sbjct: 360 SSDADVERYLLSLTLLEPQFVKSIMQEHQENKKLRKAQTVLADHMTRLIRGTHAMQRCKL 419

Query: 322 AAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK--------------AGF 361
                F  +         +      +    +    G++  +                AG 
Sbjct: 420 LTELLFSHTRTLGDPLESTRKMLSQLDTSSIGDQDGIVAKLHDEQVVGVDVTKVVTTAGL 479

Query: 362 ATSTNEARRHLKSNAIKINNSII-SNEKLQIKLQDFD-----STGNIKLSFGK 408
             S  EA+R L S  + INN  +  +    +  QD             L  GK
Sbjct: 480 VKSRAEAKRLLISGGLYINNRQVQQDANTVVSEQDLVRAKSAGGRICLLRAGK 532


>gi|323245784|gb|EGA29775.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 205

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 85/202 (42%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNI 206
             L K +   LQ+GGSDQWGNI
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNI 205


>gi|284044994|ref|YP_003395334.1| tyrosyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283949215|gb|ADB51959.1| tyrosyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 398

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 91/404 (22%), Positives = 153/404 (37%), Gaps = 36/404 (8%)

Query: 20  QISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
                  L             +   +G D TA  +H G    L  L   Q  GH  + ++
Sbjct: 21  DCLPDGGLQRKLELAAREGRPLRVKLGIDPTAPDIHLGFTVVLGKLREFQDLGHTVVLII 80

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ +GDPS R  +R M+  ++I  N    +      +          +  N  WL  
Sbjct: 81  GDYTARVGDPSGRSSTRPMLSGEQIDANATTFQQQALKVLDPA----RLEVRRNGEWLDM 136

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
               D L  +    +V R+L  +    R      +S LE  Y +LQ YD V +    D  
Sbjct: 137 RT--DELFGLVRTTTVARILERDDFSKRYAARAPISILELLYPLLQGYDSVAV----DAD 190

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G D+       +   LT P+L       KM K+L   I + +    
Sbjct: 191 VELGGTDQKFNLLLGRDIQTAYGRSEQVILTMPILPGIDGERKMSKSLGNYIGVTEP--- 247

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
           P   +     + D  + ++ + L   P+               +AK+ +A  +    H  
Sbjct: 248 PEEIYGKTLRLPDEALPTWYELLLGEPVPAGAPP--------RDAKRALARRLVARFHDD 299

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL--IVKAGFATSTNEARRH 371
             AE A  A           + MP  ++  D    G G++ L  ++ A F  S++EARR 
Sbjct: 300 AAAEAAERAFDRVHVEHRPPEEMPDAALPVD----GAGVVHLPALLAAAFGVSSSEARRQ 355

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           LK   +K++   ++ + L     + D      L  GK+      
Sbjct: 356 LKQGGVKLDGDPLAADPLDRPAAELDGR---VLQLGKRRFARLR 396


>gi|242786648|ref|XP_002480847.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Talaromyces stipitatus ATCC 10500]
 gi|218720994|gb|EED20413.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Talaromyces stipitatus ATCC 10500]
          Length = 632

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 121/499 (24%), Positives = 204/499 (40%), Gaps = 90/499 (18%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL  L ER  ++Q+      LD + +      Y G D TA SLH GH+  +M+L W 
Sbjct: 85  RKAFLDHLEERELVNQVVGPREVLDKVFTDKRTGLYTGIDPTAPSLHVGHMLPIMVLAWA 144

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---------- 113
              G+    ++GG T+  GDP+ R   R+         N+  +                 
Sbjct: 145 FNWGYPIHFILGGATARFGDPTGRLGPRQTEHRSVRTANMASMHMQLKRISASIEDYGRR 204

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
              K       AL  NN  W     ++++LR++G    +  ML  ++V++RL+    +SF
Sbjct: 205 HGYKKEWAWRRALT-NNNVWWNGTPFVEVLRDLGMHMRLGPMLGRDTVKTRLEGN-GMSF 262

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------------- 218
            EF+Y ++QA+D+ EL K    ++Q+GGSDQ+GNI+ G++  ++                
Sbjct: 263 AEFSYPLMQAWDWWELFK-KGVQVQVGGSDQFGNILFGMEAVKQTAKNTAIEIDRRPVEE 321

Query: 219 --PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              K   LT+PLLTT+SG K+GK+   A+WL+K+MTS +  +QY+    D  V  + K  
Sbjct: 322 DADKPAGLTTPLLTTSSGEKIGKSAGNAVWLDKDMTSTFELYQYFVRTPDDQVERYLKMF 381

Query: 277 TTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS---- 330
           T LP+ +I ++     Q      A+  +A E   +VHG  EAE AAT   + F       
Sbjct: 382 TFLPLDKITQLMEETRQDPSKRVAQHALAREFVDIVHGPIEAEAAATQHRQLFRPRSSIS 441

Query: 331 ------IHSQHMPT--------------------------------ISISKDEVSRGMGL 352
                     ++P                                 +++ +  V     L
Sbjct: 442 EPTPPPTQPSNIPPHLANDPKYSFMNRAAGNKFAKPTNYKNMESNRVTLPRSLVLE-QPL 500

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKI-----NNSIISNE-KLQI--------KLQDFDS 398
             ++  AG   S +E  R +    + +     ++  +S+  +                  
Sbjct: 501 AKVLYNAGLVVSNSEGHRLIVGKGVSVGSRPGDSGQMSDALEFTPIKTWVPAKTPDFLID 560

Query: 399 TGNIKLSFGKKNHIICHLC 417
              + +  GK    +  L 
Sbjct: 561 GNLLIIKIGKWKLKLIELI 579


>gi|302924178|ref|XP_003053830.1| hypothetical protein NECHADRAFT_103243 [Nectria haematococca mpVI
           77-13-4]
 gi|256734771|gb|EEU48117.1| hypothetical protein NECHADRAFT_103243 [Nectria haematococca mpVI
           77-13-4]
          Length = 608

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 122/467 (26%), Positives = 200/467 (42%), Gaps = 57/467 (12%)

Query: 8   FLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              IL ERG+I  ++ +P ++  +     +  Y+G D TA SLH GHL  LM LF L   
Sbjct: 56  VWDILQERGYIKDVAGDPEKIKEIMRVKRIGTYVGIDPTADSLHVGHLLPLMPLFLLWFH 115

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT----- 121
           GH  ++L+GG T+ IGDP+ R ESR ++ + EI +NI K+    +               
Sbjct: 116 GHPAVTLIGGSTARIGDPTGRLESRELITNSEISKNITKMHVQLTKLWTNVQHLRIKYGY 175

Query: 122 ------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +LNN  WL S+   D  + I     +  ML  E+V+ ++     +S  EF 
Sbjct: 176 EKDWAAKHHLLNNNMWLGSLTLYDFAKRIARHTRIGPMLGKETVKRKMTEGDGMSLGEFI 235

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-------------- 221
           Y +LQ +DF  +      ++Q+GGSDQ+GNI  GID  + ++  +               
Sbjct: 236 YPLLQGWDFWHMYNKLGIQMQIGGSDQYGNITAGIDALKTIRDTEEAPHLKMPTTWEYEP 295

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
              T PLLT +SG K GK+   AIWL++  TS ++ + Y+    D +V    K  T +P+
Sbjct: 296 MGFTVPLLTDSSGAKFGKSAGNAIWLDEFKTSAFDLYGYFVRRSDEEVERLLKLFTFMPL 355

Query: 282 SEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPT 338
             I +  +      +   A+  +A E+ +++HG ++A + A      F   + S  + PT
Sbjct: 356 ESITKTMEQHRVNPQQRVAQHTLAFEVVSLIHGSQKALQEAKQHEFRFGGKLPSVVNEPT 415

Query: 339 IS--------ISKDEVSRGMGL-----LTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                       + ++     +       ++  +G A+S++E +R L      I      
Sbjct: 416 EETGIVTSNNAPRSDIKLPRSIMQSSPAKILFASGLASSSSEGQRLLSQQGAYIAAQPGQ 475

Query: 386 NEKLQI---------------KLQDFDSTGNIKLSFGKKNHIICHLC 417
              L                   +       + L  GK N  I  L 
Sbjct: 476 KRGLVPGNLSWTPMKAWFPEETSKFLIDDCMLILRKGKHNVRIVELI 522


>gi|37524221|ref|NP_927565.1| tyrosyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81420551|sp|Q7N9W0|SYY2_PHOLL RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|36783644|emb|CAE12496.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 399

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 174/419 (41%), Gaps = 30/419 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLM 58
            K +   +LS    I  +  P  L             +T  +G+D TA  LH GH   L 
Sbjct: 1   MKENIDKLLSN---IAIMEPPLGLQDKLALARQENRKLTIKLGFDPTAPDLHLGHAVVLQ 57

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+ + ++G  T+ IGDP+ R++ R  +  ++I +N +      +  I    
Sbjct: 58  KLKDFQDEGHRIVVIIGDFTAGIGDPTGRNKLRPPLTPEQINKNSQTYINQLAKVI---- 113

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +  +  N  W  ++ + ++++ I    ++ +++  +  ++R + +  +   E  Y I
Sbjct: 114 NIENIEIRKNSEWFNNMPFSNVIKLISK-ITLAQIMHRDDFKTRFESKAPVHLHEIIYPI 172

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKM 237
           LQ YD V +    D  +++GG+DQ  N + G  L E  +      +T PLL    G  KM
Sbjct: 173 LQGYDSVMI----DADIELGGTDQLFNNLVGRTLQEAYEKKGQIVITMPLLEGLDGIEKM 228

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
            K+ +  I L       Y       +I D+ ++++    T +   +   +       +N 
Sbjct: 229 SKSKNNYIGLTDNANDMY---GKVMSIPDSVIINYLTLATDMEAEKQSAIVSQLELGLNP 285

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTL 355
            K  I  +I   +  R   + +A  A E F+  +  +           + +G  + LL L
Sbjct: 286 MK--IKKDIAYNIVKRYHDDISAKEATEHFERVVQKRTPEEADHDVLILPKGSYITLLDL 343

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              A  A S +E RR ++S A++++ S   +E   IK  +        +  GK+     
Sbjct: 344 CSVALPAISRSELRRLIRSGAVRVDKSKEDDE---IKNIEVIPG--TLIWIGKRYKFRI 397


>gi|171695206|ref|XP_001912527.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947845|emb|CAP60009.1| unnamed protein product [Podospora anserina S mat+]
          Length = 641

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 111/477 (23%), Positives = 197/477 (41%), Gaps = 73/477 (15%)

Query: 10  SILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            +  ERG++   + +   +  L     + AY G D TA SLH GHL  LM +FW+   G+
Sbjct: 70  DMFVERGYVKDTAGSHETIRKLMLHKRIGAYTGIDPTAPSLHIGHLLPLMPIFWMYMHGY 129

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY------------ 116
              +L+GG T+ IGDP+ R  SR  ++  ++  N+ KI     +                
Sbjct: 130 AGYTLIGGATAKIGDPTDRLVSRTPLKRTDLTMNLTKIHYQLKALWMNVEEQARRRGFEK 189

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                 A ++NN TW  S+  I++L+ +G    +  +LS ++V++++ +   +SF EF Y
Sbjct: 190 DWAWKRA-VVNNSTWWNSLPLIEVLKRLGDSMRMGPLLSRDTVKNKMSKGDGMSFSEFTY 248

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------------GERLKTPKLF 222
            ++Q +D+  + +    ++Q+GGSDQ+GNI+ G++                E        
Sbjct: 249 PLMQGWDWWHMYQANGIQMQIGGSDQYGNIVTGVETVKVVRDNEPDPAKKIEGGPFNDPV 308

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLT ++G K GK+   A+WL+K  TS ++ + Y+    D +V    K  T LPM 
Sbjct: 309 GFTVPLLTDSAGVKFGKSAGNAVWLDKFQTSEFDLYGYFVRRSDQEVEKLLKLFTFLPME 368

Query: 283 EIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM----------- 329
            I+   K+         A+ ++A E+  +VHG   A + A      +             
Sbjct: 369 NINEAMKIHSENPARRVAQHLLAFEVVGLVHGMNAAHRTALNHQARYGKQIDIPGVTLRM 428

Query: 330 -SIHSQHMPTISISK--------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               ++  P   +          + +  G  +  ++  AG A S +E  R        I 
Sbjct: 429 PKAATEDTPPSILDAPKMDMQLPESLIMGKSIGRILYAAGLAKSASEGHRLATQQGAYIG 488

Query: 381 ---------NSIISN-EKLQIKL----------QDFDSTGNIKLSFGKKNHIICHLC 417
                    ++ + +  +L                      + L  GK   +   + 
Sbjct: 489 AMPGHKRTEDNKVMDYSQLSFTPIKLWFPQETRNYLIDGKLLILRKGK---VQIRVI 542


>gi|255936395|ref|XP_002559224.1| Pc13g07980 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583844|emb|CAP91867.1| Pc13g07980 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 611

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 116/496 (23%), Positives = 210/496 (42%), Gaps = 84/496 (16%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L ERG IH +      L  + ++     Y+G D TA S+H GH+   ++L W 
Sbjct: 88  RKNFAQHLEERGLIHDVVGERELLHKVFTEKRAGLYVGIDPTAPSMHVGHMLPFLVLAWA 147

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     L+GG TS +GDP+ R + R  + S   + N+  +                +
Sbjct: 148 YVWGLPVTFLLGGATSRVGDPTGRLKGRDAVHSSIRKANMASMHMQLKKLGSSIEQYGRR 207

Query: 116 YGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  +         NN TW  S+ ++++LR++G+F  +  ML  ++V++RL +   +SF 
Sbjct: 208 HGHERKPMWKRALTNNNTWWNSMPFLEVLRDLGAFMRLGPMLGRDTVKTRLNQGDGMSFA 267

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL----------- 221
           EF+Y ILQA+D+  L +    ++Q+GG+DQ+GNI+ G++  + +                
Sbjct: 268 EFSYPILQAWDWWTLFQ-KGTQIQVGGADQYGNILFGMEAVKSISRNTADEQVRNPLESE 326

Query: 222 ----FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                  T+PLLTT SG K+GK+   A+WL+K++TS +  +QY+    D  V  + K  T
Sbjct: 327 LDRPIGFTTPLLTTPSGEKLGKSAGNAVWLDKDLTSTFELYQYFVRTPDDVVERYLKLFT 386

Query: 278 TLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAA--------------- 320
            +P+ EI  +   + +      A+  +A E   ++HG+ EA+  A               
Sbjct: 387 FIPLPEIATIMEEQNKDPSKRVAQHKLAVEFVELIHGKAEADAVALQHRQLFRPRSSTAE 446

Query: 321 ------------------------TAAMECFDMSIHSQHMPTISISKDE-VSRGMGLLTL 355
                                     +   +    +  +M  I ++  E +        +
Sbjct: 447 PTPLRKPSAPSASHPQSPTAGFETPQSGNPYAAQTNWANMGDIKVTLPESLVFNQPFNKI 506

Query: 356 IVKAGFATSTNEARRHLKSNAIKINN--------------SIISNEKLQIKLQDFDSTGN 401
           +  AG  +S +E  R + +N  K+ +              + I     +   +   +   
Sbjct: 507 LWSAGLVSSKSEGHRVIVNNGAKVGSRPGDSGPMWDQLSFTPIRPWDAEKTKEFVLNGNL 566

Query: 402 IKLSFGKKNHIICHLC 417
           + L  GK      H+ 
Sbjct: 567 LMLKLGKWKLKAVHIV 582


>gi|212543425|ref|XP_002151867.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Penicillium marneffei ATCC 18224]
 gi|210066774|gb|EEA20867.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Penicillium marneffei ATCC 18224]
          Length = 636

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 120/499 (24%), Positives = 194/499 (38%), Gaps = 90/499 (18%)

Query: 5   KSDFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL  L ER  ++Q+      LD + +      Y G D TA SLH GH+  +M+L W 
Sbjct: 85  RKAFLDHLEERELVNQVVGGRELLDKVFTDKRTGLYTGVDPTAPSLHVGHMLPIMVLAWA 144

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---------- 113
              G+    ++GG T+  GDP+ R   R          N+  +                 
Sbjct: 145 FNWGYPVHFILGGATARFGDPTGRLGPRATEHRSVRVANMAAMHMQLKRISASIEDYGRR 204

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                      AL  NN  W     ++++LR++G    +  ML  ++V++RL+    +SF
Sbjct: 205 YGYVKEWAWKRALT-NNNVWWNKTPFVEVLRDLGMHMRLGPMLGRDTVKTRLEGS-GMSF 262

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER---------------L 216
            EF+Y ++QA+D+ EL K    ++Q+GG+DQ+GNI+ G+D  +                 
Sbjct: 263 AEFSYPLMQAWDWWELFK-KGVQVQVGGADQFGNILFGMDAVKHVAKNTAIEIDRRPVED 321

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              K   LT+PLLTT+SG K+GK+   A+WL+K+MTS +  +QY+    D  V  + K  
Sbjct: 322 DVDKPVGLTTPLLTTSSGEKIGKSAGNAVWLDKDMTSTFELYQYFVRTPDDVVEKYLKMF 381

Query: 277 TTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           T LP+ +I  +     Q      A+  +A E   +VHG  EAE AAT   + F     + 
Sbjct: 382 TFLPLEKIAEIMAESTQDPSKRIAQHALAKEFVDIVHGPIEAEAAATQHRQLFRPRSSTS 441

Query: 335 HMPTISISKDEVSRGM-----------------------------------------GLL 353
                      +   +                                          L 
Sbjct: 442 EPTPPPTQPPNIPANLASNPTYSFMNRGAGNPYAKPLNYKNMESNRVLLPRSLALEQPLA 501

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISN-----EKLQIKL----------QDFDS 398
            ++  AG  +S +E  R +    + I  S   +     + L                   
Sbjct: 502 KVLYNAGLVSSNSEGHRLIVGKGVSI-GSRPGDSGEMSDALSFTPIKTWVPGKNSDFLID 560

Query: 399 TGNIKLSFGKKNHIICHLC 417
              + +  GK    +  L 
Sbjct: 561 NNLLIVKIGKWKLKLIELI 579


>gi|313678879|ref|YP_004056619.1| tyrosine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950125|gb|ADR24720.1| tyrosine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 411

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 210/421 (49%), Gaps = 25/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L+ + ER  +  ISN  +     +      Y+G+D TA SLH G+   + +L   +K 
Sbjct: 2   NILNDIEERLILKDISNKDKFIG-LNPATTGVYVGFDPTAESLHLGNYILISVLLRFKKY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G +  +++GG T +IGDPSF+D  R ++ ++ +  N  +IK    SF           ++
Sbjct: 61  GFRTYAVIGGATGMIGDPSFKDSERVLLDNESVINNKLRIKAQLESF--------GLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  +D LR +G   +V+ M++ ESV+ R+  ++ LSF EF Y +LQ  DF++
Sbjct: 113 DNYDFYKDMNVLDFLRNVGKLVNVSYMMAKESVQKRI--QKGLSFTEFTYQLLQGADFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL-SG 243
             +    ++Q+GGSDQWGNI+ GID+  ++   K     +T  LL+  +G K+GK+   G
Sbjct: 171 TYQESGIKIQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           A+W++K M SP+  +QY  + +D+ +       +   ++EI+ +        ++  A+K 
Sbjct: 231 ALWIDKTMCSPFKMYQYLLSQNDSRIKELLYWFSFKDINEINDVLDKHFANPSKQIAQKF 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE-------VSRGMGLLT 354
           +A E+   + G +E ++A       FD    +  +    +   E       + +G  ++ 
Sbjct: 291 LANEVIENIFGFDELKQAQNITKILFDKLFDTSSLSVTDLEIIEHYLPVCPIKQGDLVIK 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++   F  S  EAR  +++ A+K++N  ++N        +F          GKK  I+ 
Sbjct: 351 TLIDNKFIASNREAREFIQAGALKLDNCEVNN-DSVYNPINF-EGKYAFFKKGKKQIILL 408

Query: 415 H 415
            
Sbjct: 409 K 409


>gi|154275574|ref|XP_001538638.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150415078|gb|EDN10440.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 490

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 114/442 (25%), Positives = 204/442 (46%), Gaps = 64/442 (14%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +  FL ++ ERG ++ +        + ++  V  Y+G D TA SLH GH+   M+L W  
Sbjct: 26  RKSFLELMEERGLVNAVIG------MWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWAY 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF----------- 113
             G + + L+GG TS IGDP+ R   R  M S   +EN+  +                  
Sbjct: 80  VHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLKRLGMSIERYGAKH 139

Query: 114 -IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
             +Y      A ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++  
Sbjct: 140 GYEYEWIWRRA-IVNNNTWWLKEPFFEVMKTMGESVRLGPMLGRDTVKNRLQSGKGMALS 198

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP------------- 219
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L                
Sbjct: 199 EFVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPNPE 258

Query: 220 -----KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  + K
Sbjct: 259 DRELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQYLK 318

Query: 275 RLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             T LP++ I  + +   ++     A+  +A+E   ++ G  EA +A       F     
Sbjct: 319 YFTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQTP 378

Query: 333 SQHM--------------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           +  M                    P I++ +  V  G     ++  AG A S  EA R +
Sbjct: 379 TIEMEARTKRDFTLPETHPFNAPSPHITLPRSLV-VGQFFHKVLWSAGMAPSKAEAFRLI 437

Query: 373 KSNAIKI----NNSIISNEKLQ 390
            +N   +    +++ + ++K+ 
Sbjct: 438 VNNGASVASRSDSTAVMDDKMS 459


>gi|159125094|gb|EDP50211.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus A1163]
          Length = 631

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 116/445 (26%), Positives = 192/445 (43%), Gaps = 72/445 (16%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +      L  + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 102 RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 161

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     L+GG TS IGDP+ R + R  M S   + N+  +                K
Sbjct: 162 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGRK 221

Query: 116 YGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K       ++NN TW  S   +++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 222 HGYHKEKIWRRALVNNNTWWNSTSLLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 281

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------------RLK 217
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D  +                  
Sbjct: 282 EFTYPLLQAWDWWVLFR-KGVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 340

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT A+G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 341 LDKPIGFTTPLLTAANGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 400

Query: 278 TLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM----------- 324
            LP+ +I  +   + +      A+  +A E   ++HG+EEA+  A               
Sbjct: 401 FLPLPKIAEIMEEQNKDPSKRIAQHTLAAEFLELIHGKEEADAVALQHRQLFRPRSSTAE 460

Query: 325 ------------------------------ECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
                                              +  +   P +++    V        
Sbjct: 461 PSPMPKVTSPPRSHANSPTASYANPQSGNKYAPQTNFANMGSPHVTLPHSLVYN-QPFHK 519

Query: 355 LIVKAGFATSTNEARRHLKSNAIKI 379
           ++  AG  +S +E  R + +    +
Sbjct: 520 ILWHAGLVSSKSEGHRIVANKGAYV 544


>gi|19075933|ref|NP_588433.1| mitochondrial tyrosine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74626920|sp|O74890|SYYM_SCHPO RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|3687461|emb|CAA21185.1| mitochondrial tyrosine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 445

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 50/445 (11%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  R  IH  +  +      S  V + Y+G D TA+SLH G+L  LM L      G 
Sbjct: 8   LKQLQARSLIHNTTLLQP-----SCNVNSVYLGADPTAASLHVGNLVALMPLVHFFLNGF 62

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS--------------SFI 114
              +++G  T+ +GDPS R  SR+ M       N   I                      
Sbjct: 63  PVFTVIGDATAQLGDPSGRSTSRKQMAETTRTANSNSIHNQLKDLSSSILSYAQDCNYPF 122

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                 +   ++ N +W  ++K +  L  +G    V++ML+ +SV +RL+    LSF E 
Sbjct: 123 SQMPSSSQWSIVRNSSWYENLKLLKFLSSVGPHVRVSQMLARDSVTTRLQSPSGLSFAEL 182

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTAS 233
            Y +LQAYD+  L +N+   LQ+GGSDQWGNI  G DL  R      ++ALT+PLLT++S
Sbjct: 183 TYQLLQAYDYSYLYENHSVNLQIGGSDQWGNITAGTDLVRRTHPNANVYALTTPLLTSSS 242

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-- 291
           G K+GK+   AIWL+ ++T  Y+ +QY+ +  D         LT LP+ +++++      
Sbjct: 243 GQKLGKSAGNAIWLDPKLTDSYSLYQYFISAPDDLACKCLDMLTLLPLEQLEQIKAEHEK 302

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECF--------------DMSIHSQHMP 337
                   K +A+ +  MVHG++  E A                              +P
Sbjct: 303 DPSQRIVHKYLASNVVRMVHGKKALELAQIQTKLLHGAHQAPFGFYSEAPQQGDSFPSLP 362

Query: 338 TISISKDEVS---------RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
            I     +           +      L+      TS  EA  H+ S A+ + +  I +  
Sbjct: 363 EIRALFKDCKFYRTIDSSIKDQPFSRLLRTLQIYTSRKEATEHILSGAVSLGHKPILDSN 422

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHII 413
            +     F       L  GK+  ++
Sbjct: 423 YK-----FPDNSLFVLRAGKRTFVL 442


>gi|323302739|gb|EGA56545.1| Msy1p [Saccharomyces cerevisiae FostersB]
          Length = 372

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 108/301 (35%), Positives = 152/301 (50%), Gaps = 19/301 (6%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-------- 116
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K         
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 117 -----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI + 
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKX 354

Query: 288 A 288
            
Sbjct: 355 C 355


>gi|253987623|ref|YP_003038979.1| tyrosyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779073|emb|CAQ82233.1| tyrosyl-trna synthetase 2 [Photorhabdus asymbiotica]
          Length = 399

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 95/421 (22%), Positives = 174/421 (41%), Gaps = 34/421 (8%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLM 58
            K +   +LS    I  +  P  L             +T  +G+D TA  LH GH   L 
Sbjct: 1   MKENIDKLLSN---IAIMEPPSGLQDKLALARQENRKLTIKLGFDPTAPDLHLGHSVVLQ 57

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+ + ++G  T+ IGDP+ R++ R  +  ++I +N +      +  I    
Sbjct: 58  KLKDFQDEGHRIVVIIGDFTAGIGDPTGRNKLRPPLTLEQINKNSQTYINQLAKVI---- 113

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +  +  N  W  ++ + ++++ I    ++ +++  +  ++R + +  +   E  Y I
Sbjct: 114 NIENIEIRKNSEWFSNMPFSNVIKLISK-ITLAQIMHRDDFKTRFESKSPVHLHEIIYPI 172

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKM 237
           LQ YD V +    D  +++GG+DQ  N + G  L E  +      +T PLL    G  KM
Sbjct: 173 LQGYDSVMI----DADIELGGTDQLFNNLVGRTLQEAYEKKGQIVITMPLLEGLDGIEKM 228

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN- 296
            K+ +  I L       Y       +I D+ ++++    T +   +   +       +N 
Sbjct: 229 SKSKNNYIGLTDNANDMY---GKVMSIPDSVIINYLTLATDMEAEKQSAIVSQLELGLNP 285

Query: 297 -EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLL 353
            + KK IA  I    H    A++AA             +    + I    + +G  + LL
Sbjct: 286 MKVKKDIAYNIVKRYHDDISAKEAAEHFERVVQKRTPEEADHDVLI----LPKGSYITLL 341

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L   A    S +E RR ++S A++++ S   NE   IK  +      + +  GK+    
Sbjct: 342 DLCSVALPTISRSELRRLIRSGAVRVDKSKEDNE---IKNIEVIPG--MLIWIGKRYKFR 396

Query: 414 C 414
            
Sbjct: 397 I 397


>gi|70994384|ref|XP_751993.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus Af293]
 gi|66849627|gb|EAL89955.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus Af293]
          Length = 632

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/445 (26%), Positives = 192/445 (43%), Gaps = 72/445 (16%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +      L  + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 103 RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 162

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     L+GG TS IGDP+ R + R  M S   + N+  +                K
Sbjct: 163 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGRK 222

Query: 116 YGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K       ++NN TW  S   +++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 223 HGYHKEKIWRRALVNNNTWWNSTSLLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 282

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------------RLK 217
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D  +                  
Sbjct: 283 EFTYPLLQAWDWWVLFR-KGVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 341

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT A+G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 342 LDKPIGFTTPLLTAANGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 401

Query: 278 TLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM----------- 324
            LP+ +I  +   + +      A+  +A E   ++HG+EEA+  A               
Sbjct: 402 FLPLPKIAEIMEEQNKDPSKRIAQHTLAAEFLELIHGKEEADAVALQHRQLFRPRSSTAE 461

Query: 325 ------------------------------ECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
                                              +  +   P +++    V        
Sbjct: 462 PSPMPKVTSPPRSHANSPTASYANPQSGNKYAPQTNFANMGGPHVTLPHSLVYN-QPFHK 520

Query: 355 LIVKAGFATSTNEARRHLKSNAIKI 379
           ++  AG  +S +E  R + +    +
Sbjct: 521 ILWHAGLVSSKSEGHRIVANKGAYV 545


>gi|320591092|gb|EFX03531.1| tyrosyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 650

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 115/484 (23%), Positives = 201/484 (41%), Gaps = 77/484 (15%)

Query: 10  SILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            I  ERG++  ++ N  ++  L +Q  + AY+G D TA S+H GHL  LM LFW+   G+
Sbjct: 74  DIFEERGYVKDVAGNREDIRKLLTQKRIGAYVGIDPTAPSMHVGHLLPLMPLFWMYMHGY 133

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTGK 120
           + ++L+GG T  IGDP+ R +SR  +++  +  N+ K+                +YG  K
Sbjct: 134 RAVTLLGGATGKIGDPTDRLQSRAELKNATVAMNMVKMHYQLKKLWVNVEAQARRYGYEK 193

Query: 121 TDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           T A    +L N  W   +  +++L+ +G+   +  MLS ++VR +L     +SF EF+Y 
Sbjct: 194 TWAWRRGVLQNGHWWNKLPMLEILQRLGAGLRIGPMLSRDTVRRKLTEGDGMSFAEFSYP 253

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID---LGERLKTPKL-----------FA 223
           ++QA+D+  +  +   ++Q+GGSDQ+GNI+ G D   +    +                 
Sbjct: 254 LMQAWDWWHMYISQGIQMQIGGSDQYGNIVTGADAFKIIRASEPNPALKLSSGLLHDPVG 313

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
            T PLLT +SG K GK+   AIWL++  T  ++ + Y+    DADV +  +  T +P+  
Sbjct: 314 FTVPLLTDSSGAKFGKSAGNAIWLDRFQTPTFDLYGYFVRRPDADVEALLRLFTFIPLDR 373

Query: 284 IDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-------- 333
           I  + +          A+  +A E+  +VHG E A +A       +D    +        
Sbjct: 374 ITALMEDHTVDPARRLAQHTLAFEVVALVHGLELATEARDRHRAMYDKKKLTNQNDGDDA 433

Query: 334 -------------------QHMPTIS--ISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                                 P +   +       G  +  ++  AG   S +E  R  
Sbjct: 434 IMATTSATTVATDAYPRTLNQAPQVDLQLPAALFRAG-KVARILYAAGMVKSVSEGNRLA 492

Query: 373 KSNAIKIN-----------NSIISNEKLQI--------KLQDFDSTGNIKLSFGKKNHII 413
                 +               ++                        + L  G+ N  +
Sbjct: 493 IQKGAYVGASPGQTAHHNKGMPLTQVDFTPVHLWYPEDTKNFIIDEKYMVLRKGQHNVRV 552

Query: 414 CHLC 417
             + 
Sbjct: 553 IEIV 556


>gi|312214909|emb|CBX94863.1| similar to tyrosyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 598

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 140/507 (27%), Positives = 226/507 (44%), Gaps = 98/507 (19%)

Query: 9   LSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           LS+L ERGF+  ++     LD L ++  + AY+G D TA SLH GHL  LM L+W+   G
Sbjct: 65  LSLLEERGFVKHVAGGHETLDWLLTEKRIGAYVGVDPTAPSLHVGHLLPLMTLYWMYLHG 124

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----------- 116
           +  +SL+GGGT  IGDPS R  +R    +     N+E I+G                   
Sbjct: 125 YYTVSLLGGGTVQIGDPSGRTTARSRQAADVRSMNVESIQGQLEKLWTNVKCLGIKHQYS 184

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   +L+N +WL ++  ++L+R++GS   +  MLS +SV+ R++  + ++  EF+Y
Sbjct: 185 QYTSRRFDILDNRSWLETLSAVELMRDLGSGMRLGPMLSRDSVKLRMESGEGMAISEFSY 244

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---------------L 221
            + QAYD+  + KN   ++Q+GGSDQ+GNI  G+D    ++                   
Sbjct: 245 PLFQAYDWWSMYKNRGVQMQIGGSDQYGNICAGMDAVSHMRKIHRMSDTTSKDDDPSVAA 304

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           + LT+PLLTTASG K GK+   A+WL+K M S ++ +QY+    D DV  + K  T LP+
Sbjct: 305 YGLTTPLLTTASGEKFGKSAGNAVWLDKHMLSSFDLYQYFVRTADDDVERYLKLFTFLPL 364

Query: 282 SEIDRMAKLQGKE--INEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------- 330
            +I+ + K Q ++     A+ I+A EI  + HG  EA+KA TA  E F            
Sbjct: 365 EDIELLMKKQRQDESRRLAQHILAKEIVELAHGSAEAKKAETAHKEAFSAGTNTFPLGAL 424

Query: 331 ------IHSQHMPTISIS------------------------------KDEVSRGMGL-- 352
                  +    P   ++                              K E    + +  
Sbjct: 425 RSALSTNNKSDSPVKPLNNREKQLAAYKEAYAASSTTQARSGTSSERQKSEDRNVITIPL 484

Query: 353 --------LTLIVKAGFATSTNEARRHLKSNAIKI---------NNSIIS----NEKLQI 391
                     ++  AG A+S ++A+R +      +         N +++        + +
Sbjct: 485 SMLQPGSFPRVLFAAGLASSKSDAQRLIAKRGAYVVVPGSGSQENPTVLRWATIEAGVAV 544

Query: 392 KLQDFDST-GNIKLSFGKKNHIICHLC 417
               F      + L  GK    IC + 
Sbjct: 545 DPNHFLVDWEALILRSGKSKIQICRVI 571


>gi|21064341|gb|AAM29400.1| RE07958p [Drosophila melanogaster]
          Length = 339

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 100/276 (36%), Positives = 153/276 (55%), Gaps = 18/276 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M   + + L  L++RGF H I   +    +  L ++G  + Y G+D TA SLH G+L  +
Sbjct: 23  MS--QKNLL-ELTDRGFFHGIFPDTAAPRMKQLFTRGQQSIYAGFDPTADSLHVGNLLVI 79

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--- 114
           M L   Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+          
Sbjct: 80  MGLIHCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENH 139

Query: 115 --------KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                   K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E
Sbjct: 140 ENCLWDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESE 199

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALT 225
             +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT
Sbjct: 200 DGMSFTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLT 259

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            PL+TT  G K GK+   A+WL+   TSP+  +Q++
Sbjct: 260 LPLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFF 295


>gi|119500864|ref|XP_001267189.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Neosartorya fischeri NRRL 181]
 gi|119415354|gb|EAW25292.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Neosartorya fischeri NRRL 181]
          Length = 602

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 189/445 (42%), Gaps = 72/445 (16%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +      L  + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 73  RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 132

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G     L+GG TS IGDP+ R + R  M S   + N+  +                 
Sbjct: 133 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGKK 192

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW  S  ++++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 193 HGYYKDKIWRRALVNNNTWWNSTSFLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 252

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---------------RLK 217
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D  +                  
Sbjct: 253 EFTYPLLQAWDWWVLFR-KGVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 311

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT  +G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 312 LDKPIGFTTPLLTATNGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 371

Query: 278 TLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM----------- 324
            LP+ +I  +   + +      A+  +ATE   ++HG+EEA+  A               
Sbjct: 372 FLPLPKIADIMEEQNKDPSKRIAQHTLATEFLELIHGKEEADAVALQHRQLFRPRSSTAE 431

Query: 325 ------------------------------ECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
                                              +  +   P +++    V        
Sbjct: 432 PSPMPKVTTPPSSHANSPTASYANPQSGNKYAPQTNFANMGSPHVTLPHSLVYN-QPFHK 490

Query: 355 LIVKAGFATSTNEARRHLKSNAIKI 379
           ++  AG  +S +E  R + +    +
Sbjct: 491 ILWHAGLVSSKSEGHRIVANKGAYV 515


>gi|47097761|ref|ZP_00235250.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|47013864|gb|EAL04908.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
          Length = 226

 Score =  233 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 94/228 (41%), Positives = 130/228 (57%), Gaps = 5/228 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTA 232
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKA 226


>gi|121707082|ref|XP_001271726.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus clavatus NRRL 1]
 gi|119399874|gb|EAW10300.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus clavatus NRRL 1]
          Length = 622

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 111/445 (24%), Positives = 190/445 (42%), Gaps = 72/445 (16%)

Query: 5   KSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +      L+ + ++     Y+G D TA SLH GH+   ++L W 
Sbjct: 91  RKSFIRHLEERGLIHDVVGERDLLERIFTEKRAGIYVGIDPTAPSLHVGHMLPFIILAWG 150

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS------FIKYG 117
              G     L+GG TS +GDP+ R + R  M +   + N+  +                 
Sbjct: 151 YVWGLPVTYLIGGATSKVGDPTGRLKGREQMNASVRKANMANMHMQLKKLGVSAELYGVE 210

Query: 118 TGKTDALML-----NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
            G            NN  W     +ID+LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 211 HGYKKERFWKRALANNSIWWNGTAFIDVLRDLGNHVRLGPMLGRETVKNRLAKGDGMSFA 270

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------------- 218
           EF+Y ++QA+D+  L +    ++Q+GGSDQ+GNI+ G++  + +                
Sbjct: 271 EFSYPLMQAWDWWVLFR-KGVQVQVGGSDQYGNILFGMEAVKMISKNTPIEEDQNPLEDD 329

Query: 219 -PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT  +G K GK+   A+WL+K+MTS +  +Q++    D  V S+ K  T
Sbjct: 330 LDKPIGFTTPLLTAPNGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVESYLKMFT 389

Query: 278 TLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM----------- 324
            LP+ +I  +   ++Q      A+  +A E   +VHG++EA+  AT              
Sbjct: 390 FLPLPKIAEIMAEQIQDPSKRVAQHTLAHEFLWLVHGKKEADAVATQHRQLFRSRTSTAE 449

Query: 325 ------------------------------ECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
                                              +  +   P +++ +  V        
Sbjct: 450 PTPLPKVSSPPSSHANSPTAGFVNPQSGNKYAPQTNFANMGSPHVTLPRSLV-FNQPFHK 508

Query: 355 LIVKAGFATSTNEARRHLKSNAIKI 379
           ++  AG   S +E  R + +    +
Sbjct: 509 ILWHAGLVASKSEGHRIVANKGAYV 533


>gi|78779811|ref|YP_397923.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|115305814|sp|Q319F8|SYY_PROM9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78713310|gb|ABB50487.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 412

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 93/401 (23%), Positives = 175/401 (43%), Gaps = 28/401 (6%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           I Q  +    D   +   +   +G D T + +H GH      L   Q  GH  + ++G  
Sbjct: 24  IDQTFSEIIDDAKKNNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDF 83

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNET 130
           T+ IGDP+ ++++R  +  +++++N +              S + + +      +  N  
Sbjct: 84  TAQIGDPTGKNKTRVQLSEKQVKDNAKTYLTQLGMGKPANESILDFDSKD-KIEIRYNSE 142

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++  +GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +   
Sbjct: 143 WLKGLNLNSIIELMGS-ATVSQMLAKEEFNKRYNSQVPIALHEFLYPLLQGYDSVVVQ-- 199

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               +++GG+DQ  NI  G DL    K    F +  P+LT   G  KM K+    + L +
Sbjct: 200 --SDIELGGTDQKFNIAIGRDLQRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLTE 257

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +  S Y+       + D  + ++ + LT L +S ++           E ++ +A E+TT+
Sbjct: 258 DSLSMYS---KLEKVPDNIIPTYFELLTELDLSVLNDA------NPRELQRRMALEVTTL 308

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG EEA KA +   +           +P IS+   ++   +    L+       S++E+
Sbjct: 309 FHGAEEASKAQSNCEKLFLGHKEKVGEIPEISLK--DIVFPVKFFYLLSSLKLFKSSSES 366

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +R +K   +KI++  + N  +    +         L  GKK
Sbjct: 367 KRSIKGGGVKIDSQKVINPDIVFDSKKDLEGK--ILQIGKK 405


>gi|297170578|gb|ADI21605.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_06B06]
          Length = 233

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 90/223 (40%), Positives = 138/223 (61%), Gaps = 1/223 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D +S L  R  I Q++   +L    ++G    Y G+D TA SLH G +  L++L
Sbjct: 1   MGTKYEDIISELENRDLIAQLAGEDKLKEHIAEGKRAVYCGFDPTAESLHIGSVVPLLVL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T +IGDPSF+   R++  S  ++E +E++K   S F+ +  G 
Sbjct: 61  RRFQLAGHKPIALVGGATGLIGDPSFKSAERQLNPSNVVEEWVERLKPQLSQFLDFDCGT 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A+++NN  W  +   +  LR++G  FSVN M+  +SV+ R++R+ + +S+ EF+YM+L
Sbjct: 121 NSAVLVNNLEWTQNRDLLTFLRDVGKHFSVNSMVQKDSVKQRIERDGEGISYTEFSYMLL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           Q+ DF EL K +DC +Q+GGSDQWGNI  GIDL  R+   ++F
Sbjct: 181 QSLDFAELHKRFDCSIQVGGSDQWGNITGGIDLTXRIYQKQVF 223


>gi|156306410|ref|XP_001617599.1| hypothetical protein NEMVEDRAFT_v1g157233 [Nematostella vectensis]
 gi|156194748|gb|EDO25499.1| predicted protein [Nematostella vectensis]
          Length = 214

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 1/209 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + Q+++  EL     QG VT Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 6   LLEDLKARGLVAQMTSEEELQAHLEQGSVTLYCGFDPTADSLHIGSLVPLLTLRRFQNYG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+ + R++     +   +EK+K   S+FI + +G   A ++N
Sbjct: 66  HKPLALVGGATGLIGDPSFKAQERKLNDDATVAGWVEKLKAQVSAFISFDSGANSAEVVN 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W   +  +  LR++G  FSVN+M++ ESV+ R+ RE + +SF EF YMILQ+YDF +
Sbjct: 126 NLDWTQDMNILSFLRDVGKHFSVNQMIAKESVKQRIDREGEGISFTEFTYMILQSYDFQQ 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           L  ++ C LQ+GGSDQWGNI  G +L  R
Sbjct: 186 LNLSHRCTLQIGGSDQWGNITGGTELTRR 214


>gi|330719863|gb|EGG98350.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 342

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 83/361 (22%), Positives = 157/361 (43%), Gaps = 22/361 (6%)

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +   Q  GH+ + L+G  T +IGDP+ ++ +R+ +  +++ EN +  K      +     
Sbjct: 1   MRQFQDLGHEVLFLIGDFTGMIGDPTGKNVTRKPLTPEQVAENAKTYKEQVFKILDP--- 57

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++ N  W+  +   DL+ ++ +  SV RML  +  + R   +QS++  EF Y ++
Sbjct: 58  -EKTQVVFNSEWMGKMNAADLI-QLAAQQSVARMLERDDFKKRYANQQSIAIHEFLYPMI 115

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           Q YD V L       L++GG+DQ  N++ G +L +         +T P+L       KM 
Sbjct: 116 QGYDSVALK----ADLELGGTDQKFNLLMGRELQKHFGQTPQVVMTLPILEGLDGVQKMS 171

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           K+L+  I ++     P   ++   ++ D  +  + + L+  PMSEI++         N  
Sbjct: 172 KSLNNYIGVS---DMPGEMYRKIISMPDDLIWRYFELLSFRPMSEIEQFKAEVEAGANPQ 228

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             K  +A EI    HG+E AE A   A          + +P + ++       M +  ++
Sbjct: 229 PVKVKLAEEIVERFHGKEAAENAHKGAGNTLRAGEIPEDLPEVEVATA-GQAEMPISAVL 287

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A    ++N AR  L   A+ ++       +  +K     +   + +  GKK      L
Sbjct: 288 RMAKLVANSNAARDVLGRGAVYVDGQPC---EATLK---LAAGSEVVIQAGKKKIARVKL 341

Query: 417 C 417
            
Sbjct: 342 V 342


>gi|135195|sp|P28669|SYYM_PODAN RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|3109|emb|CAA38725.1| mitochondrial tyrosyl t-RNA synthetase [Podospora anserina]
          Length = 640

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 110/477 (23%), Positives = 195/477 (40%), Gaps = 74/477 (15%)

Query: 10  SILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            +  ERG++   + +   +  L     + AY G D TA SLH GHL  LM +FW+   G+
Sbjct: 70  DMFVERGYVKDTAGSHETIRKLMLHKRIGAYTGIDPTAPSLHIGHLLPLMPIFWMYMHGY 129

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY------------ 116
              +L+GG T+ IGDP+ R  SR  ++  ++  N+ KI     +                
Sbjct: 130 AGYTLIGGATAKIGDPTDRLVSRTPLKRTDLTMNLTKIHYQLKALWMNVEEQARRRGFEK 189

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                 A ++NN TW  S+  I++L+ +G    +  +LS ++V++++ +   +SF EF Y
Sbjct: 190 DWAWKRA-VVNNSTWWNSLPLIEVLKRLGDSMRMGPLLSRDTVKNKMSKGDGMSFSEFTY 248

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------------GERLKTPKLF 222
            ++Q +D+  + +    ++Q+GGSDQ+GNI+ G++                E        
Sbjct: 249 PLMQGWDWWHMYQANGIQMQIGGSDQYGNIVTGVETVKVVRDNEPDPAKKIEGGPFNDPV 308

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLT ++G K GK+   A  L+K  TS ++ + Y+    D +V    K  T LPM 
Sbjct: 309 GFTVPLLTDSAGVKFGKSAGNAF-LDKFQTSEFDLYGYFVRRSDQEVEKLLKLFTFLPME 367

Query: 283 EIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM----------- 329
            I+   K+         A+ ++A E+  +VHG   A + A      +             
Sbjct: 368 NINEAMKIHSENPARRVAQHLLAFEVVGLVHGMNAAHRTALNHQARYGKQIDIPGVTLRM 427

Query: 330 -SIHSQHMPTISISK--------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               ++  P   +          + +  G  +  ++  AG A S +E  R        I 
Sbjct: 428 PKAATEDTPPSILDAPKMDMQLPESLIMGKSIGRILYAAGLAKSASEGHRLATQQGAYIG 487

Query: 381 ---------NSIISN-EKLQIKL----------QDFDSTGNIKLSFGKKNHIICHLC 417
                    ++ + +  +L                      + L  GK   +   + 
Sbjct: 488 AMPGHKRTEDNKVMDYSQLSFTPIKLWFPQETRNYLIDGKLLILRKGK---VQIRVI 541


>gi|55821068|ref|YP_139510.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus LMG 18311]
 gi|55822994|ref|YP_141435.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus CNRZ1066]
 gi|81559384|sp|Q5LZR6|SYY2_STRT1 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|81560583|sp|Q5M4D1|SYY2_STRT2 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|55737053|gb|AAV60695.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus LMG 18311]
 gi|55738979|gb|AAV62620.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus CNRZ1066]
          Length = 302

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 105/305 (34%), Positives = 155/305 (50%), Gaps = 11/305 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q S+   L    + G +T YIG D TA SLH GH +  ++   L K G
Sbjct: 3   LFEDLQWRGLVKQYSS-DSLIEKLNNGKLTFYIGTDPTADSLHLGHYSSFLIAKRLAKYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GG T+++GDP      R +   ++I +N EK+K        Y        ++N
Sbjct: 62  HQPIILIGGATALVGDPRG-TSERDLAEQEKIFDNFEKLKNQIQKIFPY-------EIVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  +I  ID LRE G   +   M + E V+ +      +SF EF+YM+LQ  DF  L
Sbjct: 114 NYDWTKNIMAIDFLREFGKHITAGYMSNKELVKRQF--ATGISFTEFSYMLLQGMDFYHL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  LQ+ GSDQWGN+  GIDL  +    ++FA+T PL+T   G K GK+   AIW+
Sbjct: 172 FTTKGVTLQIAGSDQWGNMTTGIDLVRKKTGEEVFAMTMPLITDEEGKKFGKSEGNAIWI 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           ++   +P     +  N+ D  V+S  K+LT L   +I+ +          A+ I+A  +T
Sbjct: 232 SENKNTPEELHNFLLNVSDDIVISLLKKLTFLSRKDIEEIESRHKNGTGYAQGILADTVT 291

Query: 308 TMVHG 312
             +HG
Sbjct: 292 FDIHG 296


>gi|189202938|ref|XP_001937805.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984904|gb|EDU50392.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 564

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 122/366 (33%), Positives = 188/366 (51%), Gaps = 28/366 (7%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              +   LS+L ERGF+  I+  R+ LD L ++  +  Y+G D TA SLH GHL  LM L
Sbjct: 25  TGMQQSMLSLLEERGFVKDIAGGRKTLDWLLTEKRIGVYVGVDPTAPSLHVGHLLPLMAL 84

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
           +W+   G+  +SL+GGGT  IGDPS R  +R          N+  I     +        
Sbjct: 85  YWMYLHGYYAVSLLGGGTVQIGDPSGRTTARSRQGEDVQSMNVRSINEQLKTLWTNVKCL 144

Query: 120 ----------KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                          +LNN  WL  +  ++L+R++GS   +  MLS +SV+ R++  + +
Sbjct: 145 GIKHQYSYNISRKQSILNNRNWLEKLNAVELMRDLGSGMRLGAMLSRDSVKLRMESGEGM 204

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI----DLGERL--------- 216
           S  EF+Y + QAYD+  + K+   +LQ+GGSDQ+GNII G+     + +           
Sbjct: 205 SISEFSYPLFQAYDWWSMYKDRGVQLQIGGSDQYGNIIAGMGAVSHMQKIHGLNGGAEEE 264

Query: 217 -KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + LT+PLLTTASG K GK+   A+WL+ +M  P++ +QY+    DADV  + K 
Sbjct: 265 DPKEAPYGLTTPLLTTASGEKFGKSAGNAVWLDGQMLKPFDLYQYFLRTADADVERYLKL 324

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T LP+  I  +   Q ++     A+  +A EI  + HG  EA+K A A  + F    ++
Sbjct: 325 FTFLPLDSIALLMTSQNRDPSKRIAQHALAQEIVELAHGAAEAKKVAMAHKDAFGQGTNT 384

Query: 334 QHMPTI 339
             + T+
Sbjct: 385 FSLFTL 390



 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 15/93 (16%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI---NN-----------SII 384
           I++    +  G    T++  AG A S +EA R + S    +   N+             I
Sbjct: 453 ITLPLSLLQPG-SFPTVLHAAGLAASKSEASRLIASKGAYVLVPNSGSPETPTALRWETI 511

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              K             + L  GK    IC + 
Sbjct: 512 KPTKDCDPNHYLVDFEALVLRSGKSKIQICRVV 544


>gi|153820322|ref|ZP_01972989.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126509136|gb|EAZ71730.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
          Length = 311

 Score =  230 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 135/324 (41%), Gaps = 17/324 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSKLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL       KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           +    I +++    P   +    +I D  + S+ + L+  P+ E+ +            +
Sbjct: 230 SAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAAT 321
            K ++A EI    H + +A+ A  
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQ 310


>gi|187734653|ref|YP_001876765.1| tyrosyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424705|gb|ACD03984.1| tyrosyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 393

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 91/412 (22%), Positives = 171/412 (41%), Gaps = 35/412 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L IL   G    + +  EL         +   +G D TA  +H GH   +  L   Q+ G
Sbjct: 7   LDILM--GGTAVVISREELKERLKLGRPLRVKLGVDPTAPDIHLGHTVAIEKLRQFQELG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T+ IGDPS R  +R  +  +++ EN E         +          ++ 
Sbjct: 65  HQAVLLIGDFTATIGDPSGRSVTRPPLSREQVLENAETYTKQAFKILDRD----KTEIVY 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + Y + + ++ S  ++ +ML+ E  ++R++  + +   E  Y I+Q +D VE+
Sbjct: 121 NGDWFRKMTY-EEVLKLNSRVTMQQMLAREDFKARVEGGKEVRLHEMQYPIMQGWDSVEI 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIW 246
                  +++GG+DQ  NI+ G DL +        A+T PLL       KM K+    + 
Sbjct: 180 R----ADVELGGTDQLFNILVGRDLQKEEGMLPQIAMTMPLLEGLDGVRKMSKSYGNYVG 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           +++   SP   +    +  D  +  +   L            +  G    EAKK++A +I
Sbjct: 236 VDE---SPEMMFGKMMSASDELMDRYYLVLL--------GEKRDMGLHPMEAKKLLAWKI 284

Query: 307 TTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVS-RGMGLLTLIVKA--GFA 362
           T   H    A+ A +     F      +  +P + I+        + L++ + +      
Sbjct: 285 TARYHDSAAADAARSDWETRFSKRDLAAADLPEVEIASLPADMNALALVSFLFENVFQVK 344

Query: 363 TSTNEARR-HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            S    R+ H    AI++N+  +++    ++         ++LS   K H +
Sbjct: 345 KSNGVLRKEHFTPGAIQLNDVKMTDPSAVLE---LAPGSILRLS---KKHAV 390


>gi|33240859|ref|NP_875801.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81664162|sp|Q7VAP7|SYY_PROMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33238388|gb|AAQ00454.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 416

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 159/391 (40%), Gaps = 27/391 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S   +   +G D T S +H GH      L   Q  GH  I ++G  T+ IGDP+ + ++R
Sbjct: 43  SNVPLRVKLGIDPTGSEIHLGHSIIFRKLRAFQDAGHTAILIIGDFTARIGDPTGKSKTR 102

Query: 92  RMMRSQEIQENIEKIKGIF------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             +  +E+++N E             + +     +    +  N  WL     + ++  + 
Sbjct: 103 VQLSPEEVEKNSENYLNQLGKGQSKETSLLDFETEGRLEVRRNSEWLEGFDMVQIIDLLS 162

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              +V +ML+ E   +R     S++  EF Y + Q YD V +       +++GG DQ  N
Sbjct: 163 K-STVGQMLAKEEFANRYTSGTSIALHEFLYPLFQGYDSVAVQ----ADVELGGVDQKFN 217

Query: 206 IICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +  G D+         F L  P+L       KM K+L   + L ++  S Y+       +
Sbjct: 218 VAMGRDMQRHFSQKPQFGLLLPILVGLDGVQKMSKSLGNTVGLAEDALSMYS---KLEKV 274

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            D+ V ++   LT   + ++   A        E +K +A  +T   HG   A+ A   A 
Sbjct: 275 PDSQVNNYLTLLTDCEIRDLTLNA-------RELQKFMALNVTAQFHGLSVAKIAQKDAS 327

Query: 325 ECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           +         + +P +S+S   V+       L+   G  +S++ ARR ++  A++I+   
Sbjct: 328 KIVSGLKETVEDVPVLSVS--NVNFPTKAFHLLSSIGLCSSSSNARRQIQGGALRIDGKK 385

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           I +   +   Q         L  GKK     
Sbjct: 386 ILDPNFEFVDQKDIVGK--ILQLGKKTFRRI 414


>gi|256423053|ref|YP_003123706.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256037961|gb|ACU61505.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 433

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 91/415 (21%), Positives = 160/415 (38%), Gaps = 34/415 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E G   +I    +         +   +G+D TA  LH GH   L  L   Q  GH+ 
Sbjct: 45  ILPENGLTEKIRQAEK-----DNRNLIIKLGFDPTAPDLHLGHAVVLKQLRAFQDLGHQV 99

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + ++G  T+ IGDP+ +++SR+ +  +E+  N +      +  I          +L N T
Sbjct: 100 VIIVGSFTAQIGDPTGKNKSRKPLSKEEVLANADTYIRQLAKIID----TNKCQILFNGT 155

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + + ++L+ +    +V ++L       R      ++  E  Y ILQ +D V++   
Sbjct: 156 WLDKLSFPEILQLLSK-VTVAQLLHRNDFNKRFTENVPIAMHELMYPILQGFDSVQI--- 211

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +  ++MGG+DQ  N   G  L E    P    +  PLL       KM K+L+  I L  
Sbjct: 212 -NADIEMGGTDQLFNCTMGRQLQEAHGLPPQVVMCMPLLRGLDGKEKMSKSLNNIIGLT- 269

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
              +P   +    +I D  +  F    T        + A  Q     E    I   I   
Sbjct: 270 --DTPNEMFGKTMSIPDHLIDEFIDLTTDFSPE--KKHALKQLMVSGENPMNIKKIIAAN 325

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-------GMGLLTLIVKAGFA 362
           +  +     +A +A   F     ++     +  +  ++           LL L  +    
Sbjct: 326 IITQYHDTNSAASAEAFFINQFQNKSFEEKTFEQIAINSFTEGTATTTTLLDLCQQLKTD 385

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            + +  RR + + AI ++N  + +   QI          IK+  G++      L 
Sbjct: 386 ETRSGIRRLIINGAITLDNEKLLDPNQQI---HLRPG--IKIKIGRRLF--IELI 433


>gi|330929905|ref|XP_003302815.1| hypothetical protein PTT_14783 [Pyrenophora teres f. teres 0-1]
 gi|311321566|gb|EFQ89082.1| hypothetical protein PTT_14783 [Pyrenophora teres f. teres 0-1]
          Length = 611

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 188/375 (50%), Gaps = 28/375 (7%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              +   LS+L ERGF+  ++  R+ L+ L ++  +  Y+G D TA SLH GHL  LM L
Sbjct: 58  TGMQQSMLSLLEERGFVKDVAGGRKRLEWLLTEKRIGVYVGVDPTAPSLHVGHLLPLMAL 117

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---- 116
           +W+   G+  +SL+GGGT  IGDPS R  +R          N+  I     +        
Sbjct: 118 YWMYLHGYYTVSLLGGGTVQIGDPSGRTTARSRQGEDVQSMNVRSINEQLKTLWTNVKCL 177

Query: 117 -------GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                          +LNN  WL  +  ++L+R++GS   +  MLS +SV+ R++  + +
Sbjct: 178 GIKHQYSHNISRKQSILNNRNWLEKLNAVELMRDLGSGMRLGAMLSRDSVKLRMESGEGM 237

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------------- 216
           +  EF+Y + QAYD+  + K+   +LQ+GGSDQ+GNII G+     +             
Sbjct: 238 AISEFSYPLFQAYDWWSMYKDRGVQLQIGGSDQYGNIIAGMGAVSHMRKIHGLSGGTEEE 297

Query: 217 -KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + LT+PLLTT SG K GK+   A+WL+ +M  P++ +QY+    DADV  + K 
Sbjct: 298 DPKEAPYGLTTPLLTTPSGEKFGKSAGNAVWLDGQMLKPFDLYQYFLRTADADVERYLKL 357

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T LP+  I  +   Q ++     A+  +A EI  + HG  EA+K A A  + F    ++
Sbjct: 358 FTFLPLDSIALLMTSQNRDPSKRVAQHTLAQEIVELAHGAAEAKKVAMAHKDAFGQGTNT 417

Query: 334 QHMPTISISKDEVSR 348
             + T+  +   +  
Sbjct: 418 FSLFTLRSAISNIKS 432



 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 15/93 (16%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI---NNSIISNE-----KLQ 390
           I++    +  G     ++  AG ATS +EA R + S    +   N+    N      +  
Sbjct: 491 ITLPLSLLHAG-SFPHVLQAAGLATSKSEASRLIASKGAYVVVPNSGPPENPTALRWESI 549

Query: 391 IKLQDFDSTGN------IKLSFGKKNHIICHLC 417
              +D D          + L  GK    IC + 
Sbjct: 550 KASKDCDPNHYLVDFEALVLRSGKSRIQICRVV 582


>gi|167515470|ref|XP_001742076.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778700|gb|EDQ92314.1| predicted protein [Monosiga brevicollis MX1]
          Length = 370

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 110/324 (33%), Positives = 171/324 (52%), Gaps = 14/324 (4%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
            +   EL    S G    Y G+D TA SLH G+L  +M L      GH  ++L+GG T  
Sbjct: 30  STEREELVRHLSSGERVFYCGFDPTARSLHLGNLLSIMGLLHAALDGHYAVALIGGATGH 89

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM------------LNN 128
           +GDPS R+  R  + S  + EN   I     +  +  +                   +NN
Sbjct: 90  VGDPSGRNSERDPLSSDALFENAISIDLSLQTIFQNASDMAKETDAERPELCDHLKLVNN 149

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +  +D + ++G    ++ ML  +SV+SRL + + +S+ EF+Y + Q +DFVEL 
Sbjct: 150 VAWYERMSVLDFMVKVGKHARMHTMLGKDSVKSRLAQPEGMSYAEFSYQLFQGWDFVELN 209

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y C +Q+GGSDQWGN++ GI+L  + +  +  A+T PL+TTA+G K GK++  AIWLN
Sbjct: 210 QRYLCTIQLGGSDQWGNMLAGIELLRKCQDVQGHAITLPLMTTAAGVKFGKSMGNAIWLN 269

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEI 306
           ++MTSPY  +Q+  N DDAD     + LT LP+  I+ +        E  EA++++A ++
Sbjct: 270 EDMTSPYQLYQFLFNTDDADCAKLLRALTFLPLDHINNIVADHTAAPEKREAQRVLAEQV 329

Query: 307 TTMVHGREEAEKAATAAMECFDMS 330
             +VHG E  E+A           
Sbjct: 330 LRLVHGNEGLERAQNVTKVLHSGG 353


>gi|56807384|ref|ZP_00365364.1| COG0162: Tyrosyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 322

 Score =  225 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 166/323 (51%), Gaps = 11/323 (3%)

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
             +KIKG  S+F+ +  G   A ++NN  W   I +ID LR++G +F+VN M+S +SV+ 
Sbjct: 1   WSDKIKGQLSTFLDFENGDNKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKK 60

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           R+  E  +S+ EF Y I+Q YDF EL   ++  LQ+GGSDQWGN+  G +L  +      
Sbjct: 61  RI--ETGISYTEFAYQIMQGYDFYELNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTG 118

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
             +T PL+T ++G K GK+   A+WL+ + TSPY  +Q+W N+ D D V F K  T L +
Sbjct: 119 HVMTVPLITDSTGKKFGKSEGNAVWLDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSL 178

Query: 282 SEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
            EI  +       +    A+K +A E+ T+VHG E  ++A     + F  +I +     +
Sbjct: 179 DEIAEIETQFNAARHERLAQKTLAREVVTLVHGEEAYKQALNITEQLFAGNIKNLSANEL 238

Query: 340 SISKDEVSR-------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                 V            ++ ++V A  + S  +AR  +++ AI IN   + +   Q+ 
Sbjct: 239 KQGLSNVPNYHVQSIDNHNIVEILVAAKISPSKRQAREDVQNGAIYINGDRVQDLDYQLS 298

Query: 393 LQDFDSTGNIKLSFGKKNHIICH 415
             D        +  GKK + +  
Sbjct: 299 NDDKIDDQLTVIRRGKKKYAVLT 321


>gi|254243745|ref|ZP_04937067.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 2192]
 gi|126197123|gb|EAZ61186.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 2192]
          Length = 254

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 103/253 (40%), Gaps = 10/253 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
               ++GG+DQ  N++ G +L           LT PLL       KM K+L   I + + 
Sbjct: 182 -SDFELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQEA 240

Query: 251 MTSPYNFWQYWRN 263
               Y+    +  
Sbjct: 241 PGVMYSKLVSFLT 253


>gi|284029848|ref|YP_003379779.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283809141|gb|ADB30980.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 400

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 90/400 (22%), Positives = 161/400 (40%), Gaps = 24/400 (6%)

Query: 21  ISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +    +L   L S   +    G D TA  LH GH   L ++  LQ  GH+ + L+G  T+
Sbjct: 18  VVGEADLRTRLASGRPLRIKYGVDCTAPELHLGHAVNLWMMRALQDLGHRVVFLLGDLTT 77

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ R E+R  +  ++I+ N        S  ++         +  N  W  ++    
Sbjct: 78  RIGDPTGRSETRPALSPEQIELNAAAFLEQVSLVLRTDPDV--FEVRRNSEWYGAMDVAT 135

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           LL       +  ++++ +  R+R+   + ++  E +Y +LQ YD   +       L + G
Sbjct: 136 LLGLFA-HVTQAQLMARDMFRARVAAGREIALHELSYPVLQGYDSFAMR----SDLTVVG 190

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           SDQ  N   G    +RL       +TS +      G K  K+L+  I L     SP + +
Sbjct: 191 SDQLFNEQLGRHFQQRLGAEPQVVITSTITPGLDGGPKQSKSLNNYIALT---DSPRDKF 247

Query: 259 QYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
               ++ D  V ++A+  T LP   ++ +   A + G    +AK  +A  + T  HG   
Sbjct: 248 GKLMSLPDELVETYARVYTELPLGTVAALGSSAAVGGPAARDAKLKLAAAVVTRYHGAGA 307

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
           A+    A    F        MP + I    ++    L           S +E RR L+  
Sbjct: 308 AKAELEAFHRVFSDRAQPDDMPEVVIGPAPLTALELL----EALRPRDSRSELRRLLRQG 363

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A+ +    +++ + +++       G   +  GK+      
Sbjct: 364 AVSVGGVKLTDAEARVEPA-----GGTVVRSGKRTWHRVR 398


>gi|126666488|ref|ZP_01737466.1| tyrosyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628876|gb|EAZ99495.1| tyrosyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 241

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 10/241 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    I     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGIDELIPEEELVAKLKEGRPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  + S+++  N    K      +          +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTSEQVAANAVTYKEQVFKILDPA----KTRVAFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D++  +   ++V RML  +    R    Q ++  EF Y ++Q YD V L    
Sbjct: 126 MSKMSAADMIA-LAGQYTVARMLERDDFDKRYTGGQPIAIHEFLYPLIQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L +         LT P+L       KM K+L   + +N  
Sbjct: 182 -ADVELGGTDQKFNLLMGRALQKNYGQKPQVILTVPILEGLDGVQKMSKSLGNYVGVNDA 240

Query: 251 M 251
            
Sbjct: 241 P 241


>gi|292670923|ref|ZP_06604349.1| tyrosine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647544|gb|EFF65516.1| tyrosine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 320

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 140/319 (43%), Positives = 193/319 (60%), Gaps = 11/319 (3%)

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           M    I  N E  K   S FI +      A+M++N  WL  + YIDLLR++G  F+VNRM
Sbjct: 1   MTDDTIHYNCECFKKQISRFIDFNDD--RAIMVDNGDWLRKLNYIDLLRDVGKHFTVNRM 58

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           LS ES + R   E+ L+FLEFNYMI+QAYDF+EL + Y CRLQMGG DQW NII G++L 
Sbjct: 59  LSAESYKQRW--EKGLTFLEFNYMIMQAYDFLELNRRYGCRLQMGGDDQWSNIIAGVELC 116

Query: 214 ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            R K   +F LT+ LLT + G+KMGKT  GA+WL+ E TS Y+F+QYWRNIDDAD+    
Sbjct: 117 RRKKNITVFGLTNRLLTKSDGSKMGKTAGGALWLDPEKTSSYDFYQYWRNIDDADIEICL 176

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             LT LPM E+ R+A  +G+ IN +K+I+A E+T +VHG +EA KA   A   F   I  
Sbjct: 177 SLLTYLPMEEVRRLAAAEGRNINRSKEILAYEVTKIVHGEQEALKAQETARTLFSGGI-- 234

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
               +  + K  V+ G  L+ ++ ++   +S  EARR ++   I +N+  +++E   +  
Sbjct: 235 ----SAQLPKIHVTIGEKLIDVLTRSKVLSSKGEARRLIQQGGITLNDVRVTDEYYVLNE 290

Query: 394 QDFDSTGNIKLSFGKKNHI 412
            DF       +  GKK H 
Sbjct: 291 IDFLQG-IALIKKGKKKHY 308


>gi|300122241|emb|CBK22814.2| Tyrosyl-tRNA synthetase [Blastocystis hominis]
          Length = 339

 Score =  223 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 111/299 (37%), Positives = 162/299 (54%), Gaps = 7/299 (2%)

Query: 9   LSILSERGFIHQISN--PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              L  RG I+Q S      L  +      + Y+G D TA  LH GHL    +L      
Sbjct: 4   FQYLKNRGLIYQTSQLAEEALKSILPNQ--SIYLGVDPTAKGLHIGHLMACRILKRFHDA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K I+L+GG T++IGDPSF+ + R ++ + ++QEN+++I+      +         L +
Sbjct: 62  GTKCIALVGGATALIGDPSFKVKERDILSADDVQENVKEIQNDLKRVLNSNGDDN-LLFV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G    V  ML+ +SV  R+    SLSF EF Y  LQA DF+ 
Sbjct: 121 NNYDWYKNMGVIDFLRDVGKNMRVQSMLAKDSVSKRINSPNSLSFAEFAYQCLQANDFLH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C  Q+GGSDQWGNI  GID  +R     +  +T PLLT + G K GK+   AIW
Sbjct: 181 LHTQYGCVCQIGGSDQWGNITSGIDFVKRKTGDVVHGITVPLLTNSKGQKFGKSEGNAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           +NK  TS ++F+Q++   +DAD+    + LT LP+ +ID +        E  EA+ ++A
Sbjct: 241 INKSRTSNHDFYQFFLRTEDADLPILFRLLTDLPLDQIDALLAEHQKCPEKREAQGVLA 299


>gi|257069983|ref|YP_003156238.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256560801|gb|ACU86648.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 416

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 161/406 (39%), Gaps = 23/406 (5%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ER     I     LD L     +    G DLTA  LH GH   L ++  LQ  GH  I L
Sbjct: 28  ERTTDQIIGREDLLDRLREGRPLRIKFGVDLTAPDLHLGHAVNLWMMRVLQDQGHTVIFL 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  TS IGDP+ R  +R ++  ++I+EN E      +  ++            N  W  
Sbjct: 88  LGDTTSRIGDPTGRSTTRPVLTEEQIRENAESFLAQVTRVLRSEPELLRI--RRNSEWFD 145

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +    LLRE+    +   ++S +  R+RL     ++  E  Y +LQ +D V L    D 
Sbjct: 146 EMGVPGLLRELSL-VTHAHLVSRDMFRARLAAGSEIAMHELIYPVLQGFDSVAL----DS 200

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMT 252
            L + G+DQ  N   G +L  +        +TS +      G K  K+L   + L     
Sbjct: 201 DLTIVGTDQLFNEAMGRELQVKHGQRPQTVITSTVTPGLDGGPKQSKSLGNYVPLCA--- 257

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIATEITTM 309
           SP   +     + D  V ++A+  T LP    +E+ R A   G    +AK  +A  +   
Sbjct: 258 SPGEKFGRLMTLQDELVGTWARVYTDLPLAQCAELGRRADAGGAAARDAKLDLAEAVVRR 317

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
             G + A  +    +  F        M  + +           L L++ A    S + AR
Sbjct: 318 HDGADAARHSREEFVRVFSAGERPTDMTPLPLE----PGTRTALDLVLAARPELSRSAAR 373

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R L   A+ + +S +   + ++ ++D        +  G++      
Sbjct: 374 RLLSGGAVTLEDSRLREAEEEVAVRDGQ-----VVKAGRRRWFRIE 414


>gi|270490521|ref|ZP_06207595.1| tRNA synthetase class I (W and Y) [Yersinia pestis KIM D27]
 gi|270339025|gb|EFA49802.1| tRNA synthetase class I (W and Y) [Yersinia pestis KIM D27]
          Length = 210

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 74/190 (38%), Positives = 114/190 (60%), Gaps = 3/190 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTS--SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+
Sbjct: 59  KRFQLAGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMIL 179
             A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ R  + +  +SF EF+Y +L
Sbjct: 119 NSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLL 178

Query: 180 QAYDFVELAK 189
           QAYDF  L K
Sbjct: 179 QAYDFACLNK 188


>gi|148989919|ref|ZP_01821202.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924704|gb|EDK75789.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 324

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 168/318 (52%), Gaps = 11/318 (3%)

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
           K  F  F  +  G+  A+M+NN  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E
Sbjct: 8   KDNFLVFFDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--E 65

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
             +S+ EF Y I+Q YDF  L ++++  LQ+GGSDQWGN+  G +L  R        +T 
Sbjct: 66  TGISYTEFAYQIMQGYDFFVLNQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITV 125

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           PL+T A+G K GK+   A+WLN E TSPY  +Q+W N+ DAD V F K  T L + EI+ 
Sbjct: 126 PLITDATGKKFGKSEGNAVWLNPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIED 185

Query: 287 MAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-- 342
           + K          A+K++A E+ T+VHG E  ++A     + F  +I +  +  +     
Sbjct: 186 IRKQFEAAPHERLAQKVLAREVVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLR 245

Query: 343 -----KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                + +      ++ L+V +G   S  +AR  +++ AI +N   I +    +   D  
Sbjct: 246 GVPNYQVQADENNNIVELLVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKL 305

Query: 398 STGNIKLSFGKKNHIICH 415
                 +  GKK + +  
Sbjct: 306 ENELTVIRRGKKKYFVLT 323


>gi|61680508|pdb|1Y42|X Chain X, Crystal Structure Of A C-Terminally Truncated Cyt-18
           Protein
 gi|164519509|pdb|2RKJ|A Chain A, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519510|pdb|2RKJ|B Chain B, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519511|pdb|2RKJ|E Chain E, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519512|pdb|2RKJ|F Chain F, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519513|pdb|2RKJ|I Chain I, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519514|pdb|2RKJ|J Chain J, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519515|pdb|2RKJ|M Chain M, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519516|pdb|2RKJ|N Chain N, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
          Length = 392

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 107/357 (29%), Positives = 175/357 (49%), Gaps = 31/357 (8%)

Query: 5   KSDFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K +   +  ERG++   +     +  L     + AY+G D TA SLH GHL  LM LFW+
Sbjct: 33  KQNTWDLFEERGYVKDTAGTKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 92

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G+K  +L+GG T+ IGDP+ R +SR  + S +   N+ KI        +    +  A
Sbjct: 93  YLEGYKAFTLIGGSTAKIGDPTGRLKSRDHLSSSDATMNMTKIHYQLKKLWENVDTQMRA 152

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W      +++LR +G    +  MLS ++V++++ +   +SF 
Sbjct: 153 RGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFA 212

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-----------------R 215
           EF Y I+Q +D+ EL      ++Q+GGSDQ+GNII G+++ +                 +
Sbjct: 213 EFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPK 272

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               +    T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V +  K 
Sbjct: 273 TALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKL 332

Query: 276 LTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            T +P+SEI +  +          A+  +A E+ T+VHG++EA  A       +   
Sbjct: 333 FTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQHRMMYTGQ 389


>gi|83769101|dbj|BAE59238.1| unnamed protein product [Aspergillus oryzae]
          Length = 489

 Score =  220 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 118/462 (25%), Positives = 198/462 (42%), Gaps = 85/462 (18%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D TA SLH GH+   M+L W    G     ++GG TS +GDP+ R + R  + S  
Sbjct: 2   YAGVDPTAPSLHVGHMLPFMVLAWGYVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSV 61

Query: 99  IQENIEKIKGIFSSF--------IKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSF 147
            + N+  +                ++G  K  A    ++NN TW   + +I++LR++G+ 
Sbjct: 62  RKANMASMHMQLKKLGASIEQYGKRHGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAH 121

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             +  ML  E+V++RL +   +SF EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+
Sbjct: 122 MRLGPMLGRETVKNRLSKGDGMSFSEFSYPLLQAWDWWVLFK-KGVQVQVGGTDQYGNIL 180

Query: 208 CGIDLGE---------------RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
            G+D  +                        LT+PLLT  +G K GK+   AIWL+K+MT
Sbjct: 181 FGMDSVKAISKNTAMEQERDPLENDIDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMT 240

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMV 310
           S +  +Q++    D  V  + K  T LP+ EI ++   + +      A+  +A E   ++
Sbjct: 241 STFELYQFFVRTPDDVVERYLKMFTFLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELI 300

Query: 311 HGREEAEKAA---------------------------------------TAAMECFDMSI 331
           HG++EA+  A                                         +   +    
Sbjct: 301 HGKQEADAVALQHRQLFRSRSSTAEPTPLQKNSSPPAGHAQSPTSGFVNPQSGNQYAPQT 360

Query: 332 HSQHMPTISISKDE-VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN---- 386
           +  +MP+I ++  E +  G     ++  AG  +S  E  R + +    +  S   +    
Sbjct: 361 NFSNMPSIQVTLPESLVYGQNFHKILWSAGLVSSKGEGHRIVTNKGAYV-GSRPGDSGPM 419

Query: 387 -EKLQIKL---------QDFDSTGNIK-LSFGKKNHIICHLC 417
            + L             +DF   GNI  L  GK       + 
Sbjct: 420 SDDLAFTPILTWPAEKTKDFIVDGNILFLKLGKWKFKTVKIV 461


>gi|325473316|gb|EGC76511.1| tyrosyl-tRNA synthetase [Treponema denticola F0402]
          Length = 293

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 109/248 (43%), Positives = 149/248 (60%), Gaps = 4/248 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            +  L IL ERGFI Q ++ + L     +G +  Y G D T  SLH GH+  +  L  L 
Sbjct: 1   MNKALKILQERGFIQQCTDLKALSDRMDKGQIAFYTGTDPTGPSLHIGHMVPIFALKHLC 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHK + L+GGGTS IGDPS + E R+M+   E+ +N   I+     F+       +  
Sbjct: 61  REGHKGVVLVGGGTSRIGDPSGKTEMRKMLSYDELDKNAVSIQNQIEKFLAED--VENVR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN+ WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF
Sbjct: 119 FVNNKDWLADLNYIDFLRDIGSHFSVNKMLSFEAYKKRM--ETGLSFLEFNYQLLQSYDF 176

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L +NY+  LQ+GG DQWGN++ G DL  R    ++FALT PL+T A G K GK   G+
Sbjct: 177 LMLNQNYNVELQIGGDDQWGNMVAGSDLIRRKGGGEVFALTFPLVTRADGQKNGKERKGS 236

Query: 245 IWLNKEMT 252
             L  +  
Sbjct: 237 SLLGSDPC 244


>gi|148664997|gb|EDK97413.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Mus
           musculus]
          Length = 355

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/275 (34%), Positives = 143/275 (52%), Gaps = 16/275 (5%)

Query: 13  SERGFIHQISNP----RELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L  +        T Y G+D T  SLH GHL  L+ LF  
Sbjct: 43  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 102

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS-------SFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N   ++                
Sbjct: 103 QRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFAD 162

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y
Sbjct: 163 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFY 222

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 223 QVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 282

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           +GK+   A+WLN+E TSP+  +Q++    D  V  
Sbjct: 283 LGKSAGNAVWLNREKTSPFELYQFFVRQQDDSVER 317


>gi|74210706|dbj|BAE23688.1| unnamed protein product [Mus musculus]
          Length = 349

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/275 (34%), Positives = 143/275 (52%), Gaps = 16/275 (5%)

Query: 13  SERGFIHQISNP----RELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L  +        T Y G+D T  SLH GHL  L+ LF  
Sbjct: 37  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 96

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS-------SFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N   ++                
Sbjct: 97  QRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFAD 156

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y
Sbjct: 157 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFY 216

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 217 QVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 276

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           +GK+   A+WLN+E TSP+  +Q++    D  V  
Sbjct: 277 LGKSAGNAVWLNREKTSPFELYQFFVRQQDDSVER 311


>gi|241068635|ref|XP_002408493.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215492481|gb|EEC02122.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 211

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 114/209 (54%), Positives = 153/209 (73%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ 
Sbjct: 3   SFIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQY 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI ++GGGTS IGDPS +DE+R+ +   +I+ N E IK   S FIK+G GK+DA+ML
Sbjct: 63  GHKPIVIIGGGTSKIGDPSGKDEARKALTKDDIKRNAEGIKKSLSKFIKFGDGKSDAIML 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  
Sbjct: 123 DNAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYY 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           L+K+Y+C LQ+GGSDQWGNI+ G DL  +
Sbjct: 183 LSKHYNCSLQLGGSDQWGNIVMGADLIRK 211


>gi|218458814|ref|ZP_03498905.1| tyrosyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 198

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 123/198 (62%), Positives = 152/198 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M  + I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARKLMTIETIEQNIASIKSCFSNYLDYDKPG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMG 198
           AYDFVELA+        G
Sbjct: 181 AYDFVELAQALRLPSADG 198


>gi|313814308|gb|EFS52022.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 344

 Score =  215 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 173/339 (51%), Gaps = 11/339 (3%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDP      R +   +   E +E IK   S F+ +  G     M+NN  W   +  ID
Sbjct: 1   MIGDPRP-TAERTLKTKELTAEYVESIKTQISPFLDFS-GSNPVTMVNNLDWFGDMTAID 58

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            LR++G  F VN+ML  +SV  R+  EQ +SF EF+Y ILQ YD++ L + Y C LQ G 
Sbjct: 59  FLRDLGKHFRVNQMLKKDSVSVRMTSEQGISFTEFSYQILQGYDYLYLHRKYGCSLQTGA 118

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
            DQWGNI  G DL  RL    +  LT+PL+TTA+G K GK+   AIWL+  + SPY F+Q
Sbjct: 119 LDQWGNIAVGADLIRRLDGDIVHGLTTPLITTANGEKFGKSEGNAIWLDSTLCSPYKFYQ 178

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +W N DD+ + ++ +  T +   EI+    + ++      A+  +A  +T  VHG  E +
Sbjct: 179 FWLNSDDSVIGNYLRVFTEISREEIEDLEDSTIREPHKRRAQVALAKYMTQFVHGDSELQ 238

Query: 318 KAATAAMECFDMSIHSQHMPTI------SISKDEVS-RGMGLLTLIVKAGFATSTNEARR 370
            A   +   F  +      P        ++   ++   G  L   +VK G A S NEARR
Sbjct: 239 TALAVSAAVFGTADPRGLSPAAVSQMADTLPSAKLDTTGYDLAPNLVKVGLAKSNNEARR 298

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +  NAI +N   + +   +++++D        +  G+K
Sbjct: 299 LIGDNAITVNGIGVKDPYAKLEMRDQLGGIGWLVRRGRK 337


>gi|89054283|ref|YP_509734.1| tyrosyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88863832|gb|ABD54709.1| tyrosyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 264

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 123/264 (46%), Positives = 172/264 (65%), Gaps = 2/264 (0%)

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+F+SV+SRL REQ+LSF+EFNYM+LQAYD++EL + + C LQMGGSDQWGNI+ G DL
Sbjct: 1   MLAFDSVKSRLDREQALSFIEFNYMLLQAYDYLELYRRHGCVLQMGGSDQWGNIVSGADL 60

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             R+   + F LT+PL+T A G KMGK+  GA+WLN++  S Y FWQ+WRN+DDADV   
Sbjct: 61  IRRVDAGEAFGLTTPLVTRADGKKMGKSADGAVWLNEDRMSSYEFWQWWRNVDDADVAKL 120

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            K  T L ++E DR+  L+G +IN AK I+A E+TT+ HG E A  A   A E F+    
Sbjct: 121 LKLFTELDVAECDRLGALEGSDINSAKIILANEVTTLCHGAEAAAAAEATAREVFEKGGT 180

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +PT+ ++ +EV  G+ ++ LI ++G A S  +A+R +     ++N+  I+   L + 
Sbjct: 181 GDDLPTLELNTEEVGDGISIVQLITRSGLAKSGKDAKRLIAEGGARLNDEAIAEAGLMVG 240

Query: 393 LQDFDSTGNIKLSFGKKNHIICHL 416
             D      IKLS GKK H +  L
Sbjct: 241 ASDL--GAPIKLSAGKKRHALVVL 262


>gi|302546453|ref|ZP_07298795.1| tyrosine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464071|gb|EFL27164.1| tyrosine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 472

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 90/386 (23%), Positives = 156/386 (40%), Gaps = 34/386 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L+ER  I         +   +   +   +G D TA+ +H GH   +++L   Q+ GH
Sbjct: 63  IKELAER--IE--------ERRAAGQGLAIKLGIDPTAADVHLGHTVPMIVLNRFQRMGH 112

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
               L+G  T+ IGDPS R   R  +   +I  N+   +     F  +           N
Sbjct: 113 DVTLLIGDFTAKIGDPSGRTAERPPLTDDDIARNLAGYQQQVRPFFDF----EKVSFRQN 168

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL    + +LL  +     V+++L  E  R+RL     L+  E  Y I Q  D V L 
Sbjct: 169 SEWLSPYTFPELLGLLAQ-VPVSQLLQREDFRNRLAAGSGLTMSELLYPIAQGLDSVAL- 226

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIW 246
              +  +++GG+DQ  N+  G  L E         +T PL+  T  +G KM K+    + 
Sbjct: 227 ---ESDVELGGADQLLNLQMGRKLMELRGQQPQLVVTMPLIEGTDGTGAKMSKSKGNYVA 283

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIA 303
           L+       + +    +I D  +  + +  T    +EI         +     + KK++A
Sbjct: 284 LSAPAD---DVFGKIMSIPDRLMKPYLEAWTEWTDAEIAAATTRLETKSLHPMDLKKVLA 340

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-AGFA 362
            E+   ++G E A KA    +  F     +  + T+ +       G  + T++ K   F 
Sbjct: 341 GEVVAALYGVEAAMKARAGFIAQFSKKSFT-DVGTLPVVDAAEHGGETIATVLSKVLEFQ 399

Query: 363 TSTNEARRHLKSNAIKI-----NNSI 383
            S + ARR  K N +++     +   
Sbjct: 400 PSASAARRVAKQNGLRLVVEAEDGQK 425


>gi|77414929|ref|ZP_00791029.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159020|gb|EAO70231.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 300

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF
Sbjct: 1   MVNNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDF 58

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A
Sbjct: 59  YELNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNA 118

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +
Sbjct: 119 VWLDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTL 178

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTL 355
           A E+ T+VHG +  ++A     + F  +I    +  +            +    + ++ L
Sbjct: 179 AREVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDL 238

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + +
Sbjct: 239 LVTSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLN 298


>gi|159795079|pdb|2PID|A Chain A, Crystal Structure Of Human Mitochondrial Tyrosyl-Trna
           Synthetase In Complex With An Adenylate Analog
 gi|159795080|pdb|2PID|B Chain B, Crystal Structure Of Human Mitochondrial Tyrosyl-Trna
           Synthetase In Complex With An Adenylate Analog
          Length = 356

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 116/335 (34%), Positives = 173/335 (51%), Gaps = 17/335 (5%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 16  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-------GIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N   ++                G
Sbjct: 76  RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 135

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 136 RSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 195

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 196 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 255

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L     E 
Sbjct: 256 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 315

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
              +K +A E+T +VHGRE  + A       +  S
Sbjct: 316 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHRS 350


>gi|296811028|ref|XP_002845852.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843240|gb|EEQ32902.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 550

 Score =  213 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 114/479 (23%), Positives = 183/479 (38%), Gaps = 103/479 (21%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FLS + ERG +H +  +   LD + +   V  Y G D TA S+H GH+   M+L W 
Sbjct: 20  RQSFLSFMEERGLVHSVIGDRDVLDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMVLGWA 79

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G K + L+GG TS +GDP+ R  +R ++ +   +  I  +                 
Sbjct: 80  YVHGMKSVWLLGGSTSRVGDPTGRTTARPLLSNASRKAYIANMHMQLKKLG--------- 130

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
                                        ML  E V++RL+    +SF EF Y I+QA+D
Sbjct: 131 ---------------------------GTMLGREPVKTRLESGSGMSFTEFCYPIMQAWD 163

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER--------------LKTPKLFALTSPLL 229
           +  L +     +Q+GGSDQ GNI  GID  ++                      LT PLL
Sbjct: 164 WWHLYQ-KGITIQVGGSDQSGNIQFGIDTIKQILKTSPIERKPGEDPDLSTPIGLTVPLL 222

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--M 287
           TT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T +P S I     
Sbjct: 223 TTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKLFTFIPTSRIHEIVE 282

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
              +   +  A+  +A E   ++HG +EAE+A+ A    F     +      + S   + 
Sbjct: 283 EHNKSPSLRLAQHTLAQEFVELIHGAKEAEEASKAHKAIFQPQSSTSPKSEAANSIPLLP 342

Query: 348 RGMG-----------------------------------LLTLIVKAGFATSTNEARRHL 372
            G+                                       ++  AG  +S  E  R +
Sbjct: 343 SGIPEFINAGVNKKAPQMNAFTAPTHHLTLPRSMVVGQYFHKILYAAGMVSSKQEGFRII 402

Query: 373 KSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +N   +         + +             +  +       + L  GK    I  + 
Sbjct: 403 VNNGASVGCMPSGAEQMGDALSFIPLRTWPADVTEKFIIDGSLLILRIGKWRVKIIKII 461


>gi|297161577|gb|ADI11289.1| tyrosyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 472

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 87/380 (22%), Positives = 153/380 (40%), Gaps = 24/380 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-----VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L     +  +    +L     +       ++  +G D TA+ +H GH   ++ L   Q+
Sbjct: 50  ELIAARAVEVLPGVDQLAERIEERRTAGRGLSLKLGIDPTATDVHLGHAVPMIALSRFQR 109

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH    L+G  T+ IGDP+ R   R  +   +I  N+   +     F  +         
Sbjct: 110 MGHDVTLLIGDFTAKIGDPTGRTAERPPLTDDDIARNLAGYRDQVRPFFDF----EKVSF 165

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL    + +LL  +      +++L  +  R+RL     L+  E  Y I Q  D V
Sbjct: 166 RQNSEWLAPYTFPELLGLLAQ-VPASQLLQRDDFRNRLAEGSGLTMSELLYPIAQGLDSV 224

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSG 243
            L    +C +++GG+DQ  N+  G  L E         +T PL+  T  +G KM K+   
Sbjct: 225 AL----ECDIELGGADQLLNLQMGRKLMELRGQQPQLVVTMPLIEGTDGTGAKMSKSKGN 280

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKK 300
            I L+    +  + +    +I D  +  + +  T    SEID +    + +     + KK
Sbjct: 281 YIALSA---TAEDVFGKIMSIPDRLMAPYLRAWTEWTDSEIDLVKGRLEDRSLHPMDLKK 337

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++A E+ T ++G   A  A    +  F     +       +   E      + T++ K  
Sbjct: 338 VLAGEMVTALYGLPAAMSARAGFVAQFSKKSFTDVEALPEVDAAEHGAE-SVATVLSKVL 396

Query: 360 GFATSTNEARRHLKSNAIKI 379
            F  S + ARR  K N +++
Sbjct: 397 QFQPSASAARRVAKQNGLRL 416


>gi|307330737|ref|ZP_07609874.1| tyrosyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306883629|gb|EFN14678.1| tyrosyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 472

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 89/380 (23%), Positives = 156/380 (41%), Gaps = 24/380 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-----VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L     +  +    EL     +       +   +G D TA+ +H GH+  +++L   Q+
Sbjct: 50  ELIASRTVEILPGVAELAKRIEERRGAGQGLGIKLGIDPTAADVHLGHVVPMIILSRFQR 109

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH    L+G  T+ IGDPS R   R  +  ++I  N+   +     F  +         
Sbjct: 110 MGHDVTLLIGDFTAKIGDPSGRTAERPPLTDEDIARNLAGYQDQVRPFFDF----EKVSF 165

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL    + +LL  +     V+++L  E  R+RL     L+  E  Y I QA D V
Sbjct: 166 RQNSEWLAPYTFPELLGLLSQ-VPVSQLLQREDFRNRLAAGSGLTMSELLYPIAQALDSV 224

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSG 243
            L    +C +++GG+DQ  N+  G  L E         +T PL+  T  +G KM K+   
Sbjct: 225 AL----ECDVELGGADQLLNLQMGRKLMELRGQRPQLVVTMPLIEGTDGTGAKMSKSKGN 280

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKK 300
            + L+    +  + +    +I D  +  + +  T    +EI               + KK
Sbjct: 281 YVALSA---TADDVFGKIMSIPDRLMKPYLEAWTEWTDAEIAAATARVEDRSLHPMDLKK 337

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++A E+   ++G E+A  A    +  F     +  + T+ +          + T++ K  
Sbjct: 338 VLAGEVVAALYGIEKAMAARAGFVAQFSKKSFT-DVETLPVVDAGEHGAESIATVLSKVL 396

Query: 360 GFATSTNEARRHLKSNAIKI 379
            F  S + ARR  K N +++
Sbjct: 397 EFQPSASAARRVAKQNGLRL 416


>gi|254237140|ref|ZP_04930463.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa C3719]
 gi|126169071|gb|EAZ54582.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa C3719]
          Length = 332

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 83/349 (23%), Positives = 139/349 (39%), Gaps = 24/349 (6%)

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS +  +R  +  +++ EN E  K      +          +  N T
Sbjct: 2   IFLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPA----KTEVAFNST 57

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+           + S ++V RML  +    R    Q ++  EF Y ++Q YD V L   
Sbjct: 58  WM-DQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALK-- 114

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G +L           LT PLL       KM K+L   I + +
Sbjct: 115 --ADVELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE 172

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEIT 307
               P   +    +I D  +  + + L+   + EID   K         + K  +A EI 
Sbjct: 173 A---PGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIV 229

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG E A  A  +A          + +P I +S       M + +++ KAG   +   
Sbjct: 230 ARFHGEEAAASAHKSAGNRLKDGELPEDLPEIELSS---PEDMPVASVLNKAGLVKNAAA 286

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR  L + ++K++  ++ +    + L             GKK      L
Sbjct: 287 ARDLLGAGSVKVDGQVV-DRTFMLAL-----GETRVFQAGKKAFARITL 329


>gi|25145802|ref|NP_741382.1| tYrosinyl tRNA Synthetase family member (yrs-1) [Caenorhabditis
           elegans]
 gi|15789312|gb|AAB09162.2| C. elegans YARS-1 protein, isoform a, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 447

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 108/428 (25%), Positives = 189/428 (44%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDI---LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           D+++ L+ R  +        L        Q     Y G+D TA SLH G+L  L+ L   
Sbjct: 25  DYITDLNARKQLQHSYPTDLLSKCSEDLRQLPPYVYAGFDPTAESLHIGNLLILVNLIRA 84

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q+ G +PI+L+G  T+ IGDPS +   R ++    I  N  K+        +   G    
Sbjct: 85  QQFGIRPIALIGEFTASIGDPSGKKSERGLLAGDVIMHNSRKVTDQICKIFENAPGSSEK 144

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            +++NN  WL  I   D LRE      V +ML   ++++RL  E  LS+ EF+Y  +QA+
Sbjct: 145 PIIVNNNDWLGKISLRDFLRE-CKNMQVGKMLRMNTIKNRL--EVGLSYTEFSYQTMQAF 201

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTL 241
           D+  L++ Y CR Q+GG DQ G++  G    +++        +  P+LT ++G K+GK+ 
Sbjct: 202 DWYTLSEKYGCRFQLGGYDQLGHLDFGAHYIKKMMNQAFAAGVCFPILTDSTGAKLGKSE 261

Query: 242 -SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--A 298
             GA+WL+   TSP++F+Q++  + D          +   +  I  + K     + +  A
Sbjct: 262 GGGALWLDATKTSPFHFYQFFAQLHDDKAEELLLLFSLQDIEHIRDVLKNHRSNLGQWIA 321

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS-------IHSQHMPTISISKDEVSRGM- 350
           ++ +A EIT +VHG+E  E A       F            S+ +     + D     + 
Sbjct: 322 QRELAAEITRIVHGKEGLEVAMRCTKAMFGAKKADLSGLSRSEVLQLFRTTIDLKKENVA 381

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-GKK 409
            +  L   +   +        ++  A  +N     +    I     ++  ++ L   GK+
Sbjct: 382 TMGQLADASRLGSGKGHL--LMQQGAFSVNGEKKRSPSESIADVFLENASDLTLVCWGKR 439

Query: 410 NHIICHLC 417
            + +    
Sbjct: 440 GYQLVRWV 447


>gi|222870026|gb|EEF07157.1| predicted protein [Populus trichocarpa]
          Length = 351

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 122/335 (36%), Gaps = 24/335 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  GH+ 
Sbjct: 24  RGVDELLPQADWVQKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  + +++I+ N E      +  +          +  N  
Sbjct: 84  IFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAETYYTQAAKVLDPA----RTEVRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++  + + ++V RM+       R     S+S  EF Y +LQ YD V L   
Sbjct: 140 WCDKLGARGMIE-LSAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALR-- 196

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
               L+MGG+DQ  N++ G  L +         LT PLL       KM K+ +  I + +
Sbjct: 197 --ADLEMGGTDQKFNLLMGRHLQQEYGQDTQCVLTMPLLVGLDGEHKMSKSKNNYIGITE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLT-------TLPMSEIDRMAKLQGKEINEAKKII 302
           +  + +       +I D  + ++ K            P          +           
Sbjct: 255 DANTMFAKV---LSISDTLMWNWWKAGAIPRMPRCCWPRKSRRAFTARRWPMRPSRISTT 311

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           A            A +A   A          +  P
Sbjct: 312 AARAAFPTRSTRSACRARRWASVPCSSRPTWRPRP 346


>gi|317478181|ref|ZP_07937350.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
 gi|316905664|gb|EFV27449.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
          Length = 193

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 75/194 (38%), Positives = 115/194 (59%), Gaps = 5/194 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQM 197
           F+ L +   C+LQM
Sbjct: 180 FLHLYETKGCKLQM 193


>gi|255660042|ref|ZP_05405451.1| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 334

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 124/349 (35%), Positives = 198/349 (56%), Gaps = 20/349 (5%)

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  ++G  T++IGDP+ R E R+++  +EI +N + IK     F+       D ++ 
Sbjct: 2   GHTPHIVLGSATALIGDPTGRIELRKILEEKEIVKNTKTIKKQIKQFL------GDVIIH 55

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N+ WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQAYDF  
Sbjct: 56  ENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSARW--EKGLTLMELNYMILQAYDFYY 113

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KN++  LQ+GGSDQW NI+ G +L +R     +F LT+ LL  A+G KMGKT SGA+W
Sbjct: 114 LHKNHNVTLQIGGSDQWANILAGANLIKRKNNASVFGLTANLLVKANGEKMGKTSSGALW 173

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++  TS ++F+QYW N+DD  +      LT L    ID +  L+G +I + K+++A  I
Sbjct: 174 LDENKTSVFDFYQYWINLDDQSLKKTFLMLTMLDKKVIDELCNLKGPKIKQTKQMLAFLI 233

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG ++A++A   +   F             +    V     L+  +V+  F  S +
Sbjct: 234 TELIHGTKKAKEAQQRSELIFSN--------QPDLDIKLVKTSTNLIDYLVETKFIKSKS 285

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR +    + INN  + +    I+ ++        +  GKK+ +   
Sbjct: 286 EARRLISQKGLTINNKHVLDLNQIIEWKEELQ----IIRKGKKSFLTIK 330


>gi|289676245|ref|ZP_06497135.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 215

 Score =  206 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 9/214 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L    
Sbjct: 126 M-DQLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK--- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
              +++GG+DQ  N++ G +L           LT
Sbjct: 182 -ADVELGGTDQKFNLLMGRELQRAYGQEPQCLLT 214


>gi|196018135|ref|XP_002118742.1| hypothetical protein TRIADDRAFT_62757 [Trichoplax adhaerens]
 gi|190578316|gb|EDV18769.1| hypothetical protein TRIADDRAFT_62757 [Trichoplax adhaerens]
          Length = 241

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 110/240 (45%), Positives = 154/240 (64%), Gaps = 1/240 (0%)

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA+DF  L     C LQMGGSDQWGNI+ G++L  +    + F LTSPLLTT+SG K
Sbjct: 1   MLLQAFDFYHLYNKEQCVLQMGGSDQWGNIVNGVELIRKKLGKEAFGLTSPLLTTSSGAK 60

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           MGKT SGA+WLN++  SPY +WQ+WRN +DADV+ F K  T LP+  I+ ++KL GKEIN
Sbjct: 61  MGKTASGAVWLNEDTLSPYEYWQFWRNTEDADVIKFLKLFTELPLKYINELSKLSGKEIN 120

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
            AK I+A E T + HG E A  A + + + F+ +    ++P   +S  E+  GM L  L+
Sbjct: 121 GAKIILADEATKLCHGIEAANSAKSTSKQTFEDNNIDNNLPKYEVSSIEIKNGMMLFKLL 180

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V    A S + AR+ ++ N I+INN+++S+    I   DF    N+KLS GKK H++  +
Sbjct: 181 VSCNLAASNSAARKLIQGNGIRINNNVVSDINYIIHQDDF-DDKNLKLSVGKKKHMLVKV 239


>gi|145635107|ref|ZP_01790813.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267715|gb|EDK07713.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 220

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 11/214 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTNINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQ--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +   + +  + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIVFNSEWLSKLGT-EGMIRLASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            YD V L    D  +++GG+DQ  N++ G +L +
Sbjct: 174 GYDSVAL----DADVELGGTDQKFNLLVGRELQK 203


>gi|294993202|ref|ZP_06798893.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 210]
          Length = 306

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 103/307 (33%), Positives = 170/307 (55%), Gaps = 12/307 (3%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++ NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL  E  +S+ EF+Y++LQA 
Sbjct: 1   AIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQAN 59

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+VEL + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK+  
Sbjct: 60  DYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTG 119

Query: 243 G-AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAK 299
           G ++WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  + +   Q  +   A+
Sbjct: 120 GGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQ 179

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMG 351
           + +A+E+T +VHG         A+   F     ++         +   ++++ +     G
Sbjct: 180 RRLASELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPDG 239

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+V +G + S   ARR +    + +NN  + NE+   +  DF     + L  GK++ 
Sbjct: 240 IVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSI 299

Query: 412 IICHLCG 418
                 G
Sbjct: 300 AGVERIG 306


>gi|156098520|ref|XP_001615292.1| tyrosine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148804166|gb|EDL45565.1| tyrosine-tRNA ligase, putative [Plasmodium vivax]
          Length = 511

 Score =  203 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 127/468 (27%), Positives = 213/468 (45%), Gaps = 56/468 (11%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC--------SQGVVTAYIGYDLTASSLHAGHL 54
             KS  L  L ER  IH +S+ + +D +          +     Y+G D+    LH G+L
Sbjct: 45  EIKSKALKKLFERKIIHYVSDVKAVDAMLHSNETEPKREKRKAVYLGIDVNCKYLHLGNL 104

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
            QL+ L  L+      + L+GG T++IGDPSF+   R+    +EI+EN E I+      +
Sbjct: 105 VQLITLDILRNHKTDVVVLLGGSTTMIGDPSFQQADRKRPFHEEIRENEESIRSTIVRLL 164

Query: 115 KYGTGKT-----------------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
             G                        ++NN  W   +  +D L   G  FS++R+L  +
Sbjct: 165 LRGGTPNMSTSPLGDFSIDEPNKGSLTIVNNREWYDQMDLVDFLT-HGQHFSLHRILKKD 223

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +++LK    L+  + NY+ILQ+YDFV L K Y C +Q+GGSDQWGNI  GI+L + L 
Sbjct: 224 CFKAKLKGNN-LTLKDLNYLILQSYDFVHLYKRYRCCIQIGGSDQWGNIQSGIELCQHLC 282

Query: 218 TPKLFALTSPLLTTASGTKMGKTLS-----GAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +L+ LT+ LL   + TK  K+L        IW++++ T P+ FW + RN+DD  V S+
Sbjct: 283 NEQLYGLTTNLLLHRNDTKYSKSLFEQNRKMPIWIDRDYTPPFLFWNFLRNVDDQQVDSY 342

Query: 273 AKRLTTLPMSEIDRMAKLQGK-----------EINEAKKIIATEITTMVHGREEAEKAAT 321
              LT L +   D  ++                IN  K+ +A  +T  ++G E      T
Sbjct: 343 LCMLTGLEVQGGDPPSEPTPSPSEGAEATGDAHINRKKEKLADAVTAFIYGEETVRTIHT 402

Query: 322 AAMECFDMSIHSQH-------MPTISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHLK 373
            +    +               P I I + ++ ++ + ++ ++ +   A +  EA+  L 
Sbjct: 403 LSRLLKEDRFAVVDRVDQLKVFPFILIRRSDLHNKQISIVHILRRFHVAATNKEAKEKLA 462

Query: 374 SNAIKINNSIISNEKLQIKLQD-----FDSTGNIKLSFGKKNHIICHL 416
              I +N  ++ + K ++ L        D +    L  G+K +    +
Sbjct: 463 QRCIYLNRRLVEDAKYRLSLASSFVRAKDGSYYAVLGLGRKTYYSVIV 510


>gi|149235983|ref|XP_001523869.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452245|gb|EDK46501.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 417

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 192/421 (45%), Gaps = 34/421 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L  +G I  +++   L        +  Y+G D TASSLH G+L   +   +   
Sbjct: 18  SNGVQTLMRKGLIEAVTSDDVLKE----KNLHVYVGCDPTASSLHVGNLFVFLAATYF-- 71

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL- 124
             ++   L+GGGT ++GDPS +  +R ++    ++ N  KI               D   
Sbjct: 72  --NQITVLVGGGTGLVGDPSGKTSARVLIDKDILRANEVKITEQLQKLYSNFEKFQDIHG 129

Query: 125 -------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  ++NN +WL  +  +D LR +G    VN ML+ +SV++R      + F EF Y 
Sbjct: 130 GNKPLIQIVNNYSWLKDVTLLDFLRNVGPKVRVNEMLARDSVKNRD----GVHFGEFAYQ 185

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTK 236
           +LQ+YDF+ L        Q+GG+DQWGNI  G+D+ ++  +    + +T PLLTT SG K
Sbjct: 186 LLQSYDFLHL-STNGVNAQLGGADQWGNITAGLDMIKKFGSKNNCYGVTVPLLTTPSGEK 244

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A++L+K+MT+P+  +Q++ N  D  V  F   L        +           
Sbjct: 245 FGKSAGNAVFLDKDMTAPFQLYQFFINTPDNIVQRFFTLLNVAKEKIPESET-------- 296

Query: 297 EAKKIIATEITTMVHGRE--EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           E++K++A  +T ++HG +  +A  AA   +  F  ++         I        M    
Sbjct: 297 ESQKLLAKYMTWIIHGEDVADACDAAYKLLNGFPANVSINDFDKAGILIRCNKEEMLSAI 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +   +       E  R + +  + +N   IS ++L +   +F   G + +  GK    + 
Sbjct: 357 IARNSDML--RREVNRTIAAKGVTVNGERISKDELILPQHEFVVDGKVIVRVGKSKFHVL 414

Query: 415 H 415
            
Sbjct: 415 T 415


>gi|167945808|ref|ZP_02532882.1| tyrosyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 304

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 23/323 (7%)

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           ++ EN +  +      +          ++ N +W+  ++  DL++  G + +V RML  +
Sbjct: 2   QVLENAQTYEHQIFEILDP----ERTTIVFNSSWMGEMRAADLIQLAGKY-NVARMLERD 56

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R    QS++  EF Y ++Q YD V L       +++GG+DQ  N++ G +L  +  
Sbjct: 57  DFSKRYSSGQSIAIHEFLYPLVQGYDSVALK----ADVELGGTDQKFNLLVGRELQRQYG 112

Query: 218 TPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
             +   LT P+L       KM K+L   I +     +P + +    +I D  +  + + L
Sbjct: 113 QEQQVILTMPILEGLDGVQKMSKSLGNYIGIT---DAPEDMFGKIMSISDDLMWRYLELL 169

Query: 277 TTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           +  PM EI+       QG    + K ++A E+    H    AE A    +  F       
Sbjct: 170 SFRPMPEIESWRLEIEQGLNPRDVKILLAKELVGRFHDEAAAEAAHQTFVSRFQKGQIPD 229

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            MP   +S  E   G+ +  L+   G   ST+EA R +K  A+KI+   I + KL+++  
Sbjct: 230 EMPEFELSAGE---GLPIANLLRDVGLVKSTSEAMRMIKQGAVKIDGEKIGDTKLRLE-- 284

Query: 395 DFDSTGNIKLSFGKKNHIICHLC 417
              S        GK+      L 
Sbjct: 285 ---SGEGFVCQVGKRRFARVTLV 304


>gi|156087218|ref|XP_001611016.1| tyrosyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154798269|gb|EDO07448.1| tyrosyl-tRNA synthetase, putative [Babesia bovis]
          Length = 605

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 113/519 (21%), Positives = 206/519 (39%), Gaps = 106/519 (20%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVT--------AYIGYDLTASSLHAGHLTQ 56
           +S FL  L ERG  H +++   LD    +  ++         Y G DLTA  +H G L Q
Sbjct: 87  RSAFLCELIERGLFHSVTDLEGLDEFLCEHELSAESGLVPAVYYGIDLTADFIHEGTLLQ 146

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE--------------------SRRMMRS 96
           ++LL      G   + ++GGGT++IGDPSF+                      +R     
Sbjct: 147 ILLLRRFLTKGFNVVVVLGGGTTLIGDPSFKARRTKATLNATQNDRKLHNVILNRTADTV 206

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKT----------------------------DALMLNN 128
                N   I  I    +                                   + +++NN
Sbjct: 207 SVNDRNYNTIYRIVKKLLTQKIENKHGDLVEPIFTLACDLNGENIDTVISNPYNVVLVNN 266

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK----------REQSLSFLEFNYMI 178
                 +   + L  +    SV RMLS +S++SRL+          R+ ++   EF YM 
Sbjct: 267 RDLYDKLSLTEYLTTVARHMSVGRMLSRDSIKSRLQIADEGSNNSVRQANMDLAEFIYMS 326

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTK 236
           LQA DF+ ++  ++  +Q+GGSDQ GNI+ GI+LG      +  L+ +T+PLL T +G K
Sbjct: 327 LQATDFIHVSSMFNAVIQVGGSDQMGNIMSGIELGRSLGALSKTLYGITTPLLQTRTGEK 386

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL------ 290
           + K+ +  +      T   + W ++RN+DD  V  + K LT +P+  I++          
Sbjct: 387 LSKSNNEDLLRINTDTPALSLWSHFRNVDDKAVRCYLKWLTKVPLDTIEKTMNNHVNDAK 446

Query: 291 ---QGKEINEAKKIIATEITTMVHGREEAEKAATAA-----------------MECFDMS 330
                 +   ++ ++A E+TT + G E  +                        E   + 
Sbjct: 447 VRLHRCKTKLSQILLANELTTAIFGEEYTKAIHKHWISGDITDLLAPKRSYISDEFDSLI 506

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKA--GFATSTN--EARRHLKSNAIKINNSIISN 386
                +P ++++ +++ +G+    ++         S      RR ++    +IN  ++  
Sbjct: 507 TFIDCVPQLNLNVNQLMQGIPFGDIMDNLRKQMLVSGRLYNNRRAIREGTCRINGVVVKQ 566

Query: 387 EKLQIKLQDFD--------STGNIKLSFGKKNHIICHLC 417
            + ++  +D          S   I + +GK+      + 
Sbjct: 567 PEYRVTEKDLLTVSCEDGRSLNYIAIQYGKRQLYFILVI 605


>gi|331697989|ref|YP_004334228.1| tyrosyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952678|gb|AEA26375.1| tyrosyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 464

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 159/405 (39%), Gaps = 40/405 (9%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                 A  G D T + +H GH   + +L   Q+ GH  + ++G  T+ IGDPS R + R
Sbjct: 77  KGRPFVAKFGIDPTGAEVHLGHSVPMQILSRFQRMGHDVVFIVGDMTAKIGDPSGRSDDR 136

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
             +  ++I+ N+   +   S F  +      A    N  WL  I     +  I +   V+
Sbjct: 137 PALTDEDIEHNLATYREQVSPFFDFD----RAHFRRNGDWLRKITL-PEIIGITAQIPVS 191

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
             L  E  R RL   Q LS  E  Y I+ A D VE+    +C L++GG DQ+ N+     
Sbjct: 192 MSLQREDFRKRLDAGQGLSLAELMYSIVMALDSVEI----NCDLEVGGIDQFLNMQMCRK 247

Query: 212 LGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           + E         + + L+  T  +G KM K+    + L      P   +    ++ D  V
Sbjct: 248 VMEISGQVPELVVATSLIEGTDGTGAKMSKSKGNYVPLTAA---PGEIFGKIMSVPDRLV 304

Query: 270 VSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+    +E                + KK++A E+T  +HG + A KA       
Sbjct: 305 EPYFRALSEWLDAELAVAAERVAAGTLHPMDLKKVLAGEVTAAIHGVDAAMKARDEFAAR 364

Query: 327 FDMSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI----N 380
           F     ++   +PT++        G+ +   +   GFA S  + RR  + N +++    +
Sbjct: 365 FSRRTFAEVDDLPTVA------DLGVSVTEAVKALGFAASNGDVRRVAQQNGLRLVVEAD 418

Query: 381 NSI----ISNEKLQIKLQDFDST------GNIKLSFGKKNHIICH 415
                  ++ +  +  L D          G+  L  G +      
Sbjct: 419 GEQEQLSLTADDARAVLADLVKDRLDGKTGDYFLKVG-RKLARIR 462


>gi|297172370|gb|ADI23345.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0770_27O18]
          Length = 212

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 9/203 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I      + + S   +    G+D TA  LH GH   +  L   Q+ GH  +
Sbjct: 10  LLRRGADEIIQEDELRERIASGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQELGHHVM 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +  +EI+ N E  K      +          ++ N TW
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLTPEEIERNAETYKEQVFKILDP----EKTEVVFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +    +++ + S ++V RML  +    R +  Q ++  EF Y ++Q YD V +    
Sbjct: 126 MNQVGAAGMIK-LASQYTVARMLERDDFDKRYRANQPIAVHEFLYPLVQGYDSVAM---- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGE 214
           +  +++GG+DQ  N++ G  L +
Sbjct: 181 EADVELGGTDQKFNLLMGRTLQK 203


>gi|221056076|ref|XP_002259176.1| Tyrosine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809247|emb|CAQ39949.1| Tyrosine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 519

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 141/475 (29%), Positives = 214/475 (45%), Gaps = 63/475 (13%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC--------SQGVVTAYIGYDLTASSLHAGHL 54
             KS  L  L ER  IH +S+   +D +          +   + Y+G D+    LH G+L
Sbjct: 46  EIKSKALKKLFERKLIHYVSDIEGVDNILYHNETESKKEKRKSVYLGIDVNCKYLHLGNL 105

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
            QLM+L  L+      + L+GG T+ IGDPSF+   RR    +EI EN E IKG     +
Sbjct: 106 LQLMILDILRNHNTDIVVLLGGSTTKIGDPSFQQAERRKPIHEEISENEESIKGNIIRLL 165

Query: 115 --------------KYGTGKTDALM-------------LNNETWLCSIKYIDLLREIGSF 147
                         KY  G                   +NN  W   +   D L   G +
Sbjct: 166 LRGEELNVGTSPGGKYDMGGNTQDEFSIHRPNKGSLTIVNNRQWYKQMDLADFL-IHGQY 224

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           F+++++L  E  + +LK    L+  + NY+ILQ+YDFV L K Y C +Q+GGSDQWGNI 
Sbjct: 225 FALHKILKKECFKDKLKGNN-LTLKDLNYLILQSYDFVHLYKKYRCFIQIGGSDQWGNIQ 283

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-----AIWLNKEMTSPYNFWQYWR 262
            GI+L + L   +L+ LTS LL   + TK  K+L        IW++KE T P+ FW + R
Sbjct: 284 SGIELCQHLHNTQLYGLTSNLLLHKNNTKYSKSLFEQNRKIPIWIDKEYTPPFLFWNFLR 343

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMA--------KLQGKEINEAKKIIATEITTMVHGRE 314
           NIDD  V S+   LT L +   +  +             +IN AK+ +A  +TT V+G E
Sbjct: 344 NIDDQQVDSYISMLTDLDVQSRNPSSDITSGGEDYHDDAQINRAKEKLADSVTTFVYGAE 403

Query: 315 EAEKAATAAMECFDMSIHSQH-------MPTISISKDEV-SRGMGLLTLIVKAGFATSTN 366
                 T      +               P I I+K+++    + ++ ++ K   A++  
Sbjct: 404 TVCTIHTLNRLLKEDEFSVIDRVDQLKVFPFIVINKNDIHKNDISIVHILRKFEVASTNK 463

Query: 367 EARRHLKSNAIKINNSIISNEKLQIK-----LQDFDSTGNIKLSFGKKNHIICHL 416
           EA+  L    I +N  +I N K  +      ++  D      L  G+K +    +
Sbjct: 464 EAKEKLAQRCIYLNRQLIDNAKYHLSMPSSFVKAKDGNYYAILGLGRKTYYSIIV 518


>gi|313763460|gb|EFS34824.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313816642|gb|EFS54356.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|314914619|gb|EFS78450.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314919425|gb|EFS83256.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920668|gb|EFS84499.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314930438|gb|EFS94269.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314954509|gb|EFS98915.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314957371|gb|EFT01474.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|315099087|gb|EFT71063.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315100533|gb|EFT72509.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|327452799|gb|EGE99453.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327457876|gb|EGF04531.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328755357|gb|EGF68973.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328757802|gb|EGF71418.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 331

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDTD-GRNTAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     EI+       +      A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|289642116|ref|ZP_06474268.1| tyrosyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508079|gb|EFD29026.1| tyrosyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 467

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 164/407 (40%), Gaps = 39/407 (9%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            R ++         A  G D T   +H GH   +++L   Q+ GH+ + ++G  T+ IGD
Sbjct: 69  ERIVEAAKKDRPFIAKFGIDPTGHEVHLGHAVPMLILSRFQRMGHEVVFIVGDVTAKIGD 128

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS R + R  +  ++I  N+   +   + F  +    T A    N  WL  +K   L+  
Sbjct: 129 PSGRSDERPALTDEDIVRNLATYREQVAPFFDF----TRARFRRNGDWLREVKLPQLIE- 183

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           I +   V+  L  E  R RL   Q LS  E  Y ++ A D VE+    +  L++GG DQ+
Sbjct: 184 IAAQIPVSMSLQREDFRKRLDAGQGLSLAEVLYSVVMALDSVEI----NTDLEVGGIDQF 239

Query: 204 GNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            N+     +           + + L+  T  +G KM K+    + L          +   
Sbjct: 240 LNMQMCRHVMHIRGQVPELVVATSLIEGTDGTGAKMSKSRGNYVPLTAP---AGEIFGKI 296

Query: 262 RNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            ++ D  V  + + L+    SE    +           + KKI+A E+T  VHG + A K
Sbjct: 297 MSVPDRLVTPYFQALSEWLDSELAVAEERLAAGSLHPMDLKKILAGEVTAAVHGVDAAMK 356

Query: 319 AATAAMECFDMS--IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
           A    +  F        +++P ++        G  +   +   GFA S  + RR  + N 
Sbjct: 357 AREEFVARFSRRAFGDVENLPEVA------DLGQSVTDAVKALGFARSNGDVRRVAQQNG 410

Query: 377 IKI------NNSIIS---NEK-----LQIKLQDFDSTGNIKLSFGKK 409
           +++          I+   +E        +K +  +  G+  L  G+K
Sbjct: 411 LRLVVEAEGGQEQITLTADEAREPLMALVKDKLGERPGDYYLKVGRK 457


>gi|313773434|gb|EFS39400.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313793845|gb|EFS41874.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801235|gb|EFS42493.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313808082|gb|EFS46559.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313811449|gb|EFS49163.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313813583|gb|EFS51297.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313819721|gb|EFS57435.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313822271|gb|EFS59985.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823736|gb|EFS61450.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313829630|gb|EFS67344.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313831189|gb|EFS68903.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834849|gb|EFS72563.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|313840035|gb|EFS77749.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314923946|gb|EFS87777.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314924567|gb|EFS88398.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314962166|gb|EFT06267.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314963795|gb|EFT07895.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314966013|gb|EFT10112.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314968378|gb|EFT12477.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314974067|gb|EFT18163.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976753|gb|EFT20848.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978792|gb|EFT22886.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314981824|gb|EFT25917.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|314984475|gb|EFT28567.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314986653|gb|EFT30745.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990768|gb|EFT34859.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315079647|gb|EFT51637.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315081126|gb|EFT53102.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315087013|gb|EFT58989.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089188|gb|EFT61164.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315090692|gb|EFT62668.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094903|gb|EFT66879.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315095242|gb|EFT67218.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315104176|gb|EFT76152.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|315108920|gb|EFT80896.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327327980|gb|EGE69749.1| tyrosine--tRNA ligase [Propionibacterium acnes HL103PA1]
 gi|327329577|gb|EGE71336.1| tyrosine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327329579|gb|EGE71337.1| tyrosine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327333962|gb|EGE75678.1| tyrosine--tRNA ligase [Propionibacterium acnes HL097PA1]
 gi|327444359|gb|EGE91013.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444577|gb|EGE91231.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327446249|gb|EGE92903.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327452167|gb|EGE98821.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|328752011|gb|EGF65627.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760141|gb|EGF73718.1| tyrosine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 331

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDTD-GRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     EI+       +      A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|315083446|gb|EFT55422.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 331

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDTD-GRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     EI+       +      A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHYEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|308492005|ref|XP_003108193.1| CRE-YARS-1 protein [Caenorhabditis remanei]
 gi|308249041|gb|EFO92993.1| CRE-YARS-1 protein [Caenorhabditis remanei]
          Length = 468

 Score =  196 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 103/451 (22%), Positives = 193/451 (42%), Gaps = 47/451 (10%)

Query: 7   DFLSILSERGFIHQISNPRELDIL---CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           D++  LS+R  +        L+       Q     Y G+D TA SLH G+L  L+ L   
Sbjct: 25  DYIRDLSKRKPLQHSYPADLLNKYEAELKQLPPYVYAGFDPTAESLHVGNLLILVNLIRC 84

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +PI+L+G  T+ IGDPS +   R ++    +  N +K+     +        ++ 
Sbjct: 85  QQFGLRPIALIGEFTASIGDPSGKKSERDLLGEDVVIHNSKKVSEQIRNVFANTCRSSEP 144

Query: 124 LM-LNNETWLCSIKYI---------------DLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            + +NN  WL  +                             + +ML  ++++SRL  E 
Sbjct: 145 PIVVNNNDWLGKVNSNIVNILYLFSHFQISLRDFFRECKSMQLGKMLRMKTIKSRL--ET 202

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFA 223
            LS+ EF+Y  +QAYD+  L++ + CR Q+GG DQ G++  G    ++            
Sbjct: 203 GLSYTEFSYQTMQAYDWYTLSEKFGCRFQLGGYDQLGHLDFGAHYIKKRGNLSDNRFAAG 262

Query: 224 LTSPLLTTASGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
           +  P+LT ++G K+GK+   GA+WL+   TSP++F+Q++  + D          +   + 
Sbjct: 263 VCFPILTDSAGNKLGKSEGGGALWLDPVKTSPFHFYQFFAQLHDDKAEELLLLFSLRGVE 322

Query: 283 EIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH----- 335
           +++ + +     + +  A+K +A E+T MVHG +  + A       F             
Sbjct: 323 DLEELLQNHRNNLGKWIAQKELAMEVTKMVHGEDGLDSALRCTKAMFGSKKADLTGLSRS 382

Query: 336 ------MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                   TI + K+++S    L  +  + G      +    ++  A  +N +   N   
Sbjct: 383 EILKLFRTTIDLKKEDISSMGDLANV-TRQG----NGKGYLLMQKGAFSVNGTKKVNPAE 437

Query: 390 QIK--LQDFDSTGNIKLSF-GKKNHIICHLC 417
            I+       +  ++ L   GK+++ +    
Sbjct: 438 SIEGVSSSLPALTDLTLVCWGKRDYRLVRWI 468


>gi|68073779|ref|XP_678804.1| tyrosine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56499388|emb|CAH96531.1| tyrosine--tRNA ligase, putative [Plasmodium berghei]
          Length = 548

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 134/487 (27%), Positives = 211/487 (43%), Gaps = 82/487 (16%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQ 56
             KS+ L  L ER  I+ IS+ + +D +       ++   + YIG DL    LH G LTQ
Sbjct: 54  KIKSNALKKLYERKLINYISDLKNIDKILYENEHENEKKKSVYIGIDLNCKYLHIGSLTQ 113

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  L  L+      I L+G  T+ IGDPSF+   R+   + EI +N + IK     FI  
Sbjct: 114 LKTLEILRSYKTDVIILLGNSTTQIGDPSFQLNERKETLNAEICQNEQSIKESIIDFILN 173

Query: 117 GT--------------------------------------------GKTDALMLNNETWL 132
                                                         GK +  +L N  W 
Sbjct: 174 NDNSDFNEKDLHMKELCGINLNQISFQDICRKTDLLSKDEIIYKCSGKGNLRILKNNIWY 233

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +  ID L+  G  F +N++L  ESV  + + +  L+  + NY+ LQ+YDF+ L K Y 
Sbjct: 234 DKMNVIDFLK-YGEHFGINKLLRKESVIKKYQNKN-LTLKDLNYISLQSYDFLHLFKKYK 291

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-----AIWL 247
             +Q+GGSDQWGNI  GI+L + +   +L+ LT+ LL   +  K  K+L        IW+
Sbjct: 292 TYIQIGGSDQWGNIQSGIELCQNIYNQQLYGLTTNLLLYKNNIKFSKSLFQENKKLPIWI 351

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI------------ 295
           +KE TSPY FW + RN++D  V S+   LT L ++  + +     +              
Sbjct: 352 DKEYTSPYLFWNFLRNVEDQKVQSYIDMLTNLNINLDEELKNSNNENPKNIIASSYDNII 411

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-------MPTISISKDEVSR 348
           N  KK +A  IT  ++G+   +K         +   +          +P   I+ + + +
Sbjct: 412 NSVKKKMADHITNTIYGKCVVDKIHKINKIIKNNKFNEIENLQELKILPYNQININLIKQ 471

Query: 349 G-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG-----NI 402
             + +  ++     A +  EA+  +  N I IN  +I+N K  + + DF  T       +
Sbjct: 472 NKINITDVLKLFQIAMTNKEAKEKINQNCIYINTKLITNPKYILNIMDFLKTKNDNYYYV 531

Query: 403 KLSFGKK 409
            L  GKK
Sbjct: 532 LLRLGKK 538


>gi|313826058|gb|EFS63772.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
          Length = 331

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDTD-GRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     +I+       +      A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREKIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|238063978|ref|ZP_04608687.1| tyrosyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885789|gb|EEP74617.1| tyrosyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 450

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 100/286 (34%), Positives = 147/286 (51%), Gaps = 10/286 (3%)

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           + LR++G  F VN+ML+ E V++RL  E  +SF EF+Y +LQA DF EL + + C+LQ G
Sbjct: 165 EFLRDVGKHFPVNKMLAREVVKARL--ETGISFTEFSYQLLQANDFYELHRRHGCQLQFG 222

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           GSDQWGNI  G+D   R     + A  +PL+T A GTK GKT  GA+WL+ E+TSPY F+
Sbjct: 223 GSDQWGNITAGVDYVRRRGAGPVQAFVTPLVTKADGTKFGKTEGGAVWLDPELTSPYAFY 282

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEA 316
           Q+W N DD DVV + +  +     EI+       +      A++ +A E+TT+VHG  E 
Sbjct: 283 QFWLNADDRDVVRYLRYFSFRSRDEIERLEKETAERPAARLAQRALAEELTTLVHGEREM 342

Query: 317 EKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
            +A  A+   F         P              +     +  L+ ++G   S  EARR
Sbjct: 343 AQAVAASQALFGRGSLDDLTPETLRAALTEAGLVHLDELPDVAGLLRESGLVPSAKEARR 402

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +      +NN+ I+    +   +D      + L  GKK+     L
Sbjct: 403 VIAEGGAYVNNNRITEVDARPTPEDLLHGRYLVLRRGKKSFAGVEL 448


>gi|315106695|gb|EFT78671.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 331

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDTD-GRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     EI+       +      A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSGGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|270011290|gb|EFA07738.1| hypothetical protein TcasGA2_TC002218 [Tribolium castaneum]
          Length = 254

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 76/231 (32%), Positives = 122/231 (52%), Gaps = 12/231 (5%)

Query: 7   DFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + L  L ERG    I   +    +  L +      Y G+D TA SLH G+L  L+ L   
Sbjct: 23  NLLK-LKERGMYQDIFPDTATNTVTDLLNAAPQRVYAGFDPTADSLHIGNLLVLINLIHW 81

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--------FIK 115
           Q+ GH+PI+L+GG T+ IGDPS +   R  + S  + EN+  I+    +          K
Sbjct: 82  QRGGHQPIALIGGATAKIGDPSGKTSEREKLASAFVDENVIGIRNNIETLFYNHEKYLWK 141

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                   +++NNE+W   +  IDL+   G +  +  +LS  SV++RL+    +SF EF+
Sbjct: 142 KKGKLAPLIIVNNESWYSKMSPIDLIGGAGRYLRMGTLLSRTSVQTRLQSPAGMSFTEFS 201

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           Y + QAYD++ L + Y+C  Q+GG+DQ GNI+ G +L  +    +++  T+
Sbjct: 202 YQLFQAYDWLHLFQKYNCSFQIGGNDQMGNIMSGHELISKTCDKQVYGKTT 252


>gi|158316978|ref|YP_001509486.1| tyrosyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158112383|gb|ABW14580.1| tyrosyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 465

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 90/389 (23%), Positives = 159/389 (40%), Gaps = 32/389 (8%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           D         A  G D T + +H GH   ++LL    + GH+ + ++G  T+ IGDPS R
Sbjct: 73  DAAARSRPFVAKFGIDPTGAEVHLGHAVPMLLLSRFARMGHRVVFIVGDITAKIGDPSGR 132

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            + R  +  ++I  N+   +   + F  +      A    N  WL  ++   LL  +   
Sbjct: 133 SDERPALTDEDIARNLTTYRAQVTPFFDF----ERAEFRRNGDWLREVRLPRLLEIVSR- 187

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             V+  L  E  R RL     LS  E  Y ++ A D VE+    D  L++GG DQ+ N+ 
Sbjct: 188 IPVSMSLQREDFRRRLDAGHGLSLAELLYSVVMALDSVEV----DSDLEIGGIDQFLNMQ 243

Query: 208 CGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
               + E         + + L+  T  +G KM K+    + L      P   +    ++ 
Sbjct: 244 MCRKVMEICGQTPEIVVATSLIEGTDGTGAKMSKSRGNYVPLTAA---PGEIFGKIMSVP 300

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHGREEAEKAATA 322
           D  V  + + L+    SE+  +A  +        + KKI+A E+T  +HG + A  A   
Sbjct: 301 DRLVEPYFRALSEWRDSELAVLAARREAGTAHPMDLKKILAGEVTAAIHGVDAAMTARAE 360

Query: 323 AMECFDMSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            +  F     ++   +P +S        G  +   +   GFA S  + RR  + N +++ 
Sbjct: 361 FVARFSRRTFAEVDDLPVLS------DLGATVADAVRGLGFAKSNGDVRRVAEQNGLRL- 413

Query: 381 NSIISNEK----LQIKLQDFDSTGNIKLS 405
             ++ +E+    + +   D     +  L 
Sbjct: 414 --VVESEEGQTQVPLTPDDVREPLSAVLK 440


>gi|312074099|ref|XP_003139818.1| tyrosyl-tRNA synthetase [Loa loa]
 gi|307765019|gb|EFO24253.1| tyrosyl-tRNA synthetase [Loa loa]
          Length = 552

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 178/431 (41%), Gaps = 61/431 (14%)

Query: 6   SDFLSILSERGFIHQISNPRELD----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             F   L++R  I   S+P  L      + S      Y G+D TA SLH GHL  +  LF
Sbjct: 163 KQFCVDLTKRNLIS-TSHPSNLSSDDFKVVSTLPDVVYAGFDPTAESLHIGHLLVITNLF 221

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
                G   I+L+GG T+ +GDPS     R ++   EI +   KI     + I++     
Sbjct: 222 RATLHGCHAIALIGGATAYVGDPSGHVTDRIIVSGNEIDQYAGKINLQLMNSIQF----- 276

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
                                E+   F +  ML    V+SR++    LS  EF Y I Q+
Sbjct: 277 --------------------LEVCRDFRLGDMLRLGMVKSRMRDGSGLSCSEFLYQIFQS 316

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT- 240
           YD+  L+++Y+C  Q+GG+DQ G+   G D  ++       ++  PLLT A G K+ KT 
Sbjct: 317 YDWYRLSRDYNCHFQIGGNDQLGHFDAGYDYIKKKTGKLSASICLPLLTDAQGKKLSKTS 376

Query: 241 -LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                IWL++  TSP+ F+QY+   +  +              E              A+
Sbjct: 377 KEGSNIWLDERKTSPFTFYQYFSLRNVEE-------------IEEIEREHHANLGKWVAQ 423

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A E+T  VHG    + A   +   F  S+        S+ +++       +  + ++
Sbjct: 424 EKLAEELTKFVHGSNGLKMAKQCSKILFHGSLSELRKMPTSLIEEQFGSAS--VQQLFRS 481

Query: 360 GFATSTNE-ARR----------HLKSNAIKINNSIISNEKLQIKLQDF-DSTGNIKLSF- 406
           GF ++  E A R           +K+ A+K+N +  ++    +          NI L   
Sbjct: 482 GF-STMGELADRVHNGEGSSINKMKAGALKLNGTRFTDPDELVDFDKICLDGKNITLVCW 540

Query: 407 GKKNHIICHLC 417
           GK+ + +    
Sbjct: 541 GKRKYHLVRWI 551


>gi|225012587|ref|ZP_03703022.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
 gi|225003120|gb|EEG41095.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
          Length = 266

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 96/266 (36%), Positives = 145/266 (54%), Gaps = 18/266 (6%)

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           +SF EF Y +LQ YDF+ L K  DCRLQMGGSDQWGNI  G +L  R +  K +A+T PL
Sbjct: 1   MSFTEFTYQLLQGYDFLHLFKTLDCRLQMGGSDQWGNITTGTELIRRKEGGKAYAITCPL 60

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--R 286
           +  A G+K GKT  G IWL+K+ TSPY F+Q+W N  D D +++ K  T L   EI+   
Sbjct: 61  IKKADGSKFGKTEGGNIWLDKKRTSPYKFYQFWLNTSDEDALNYIKIFTFLSQDEINSIS 120

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IH 332
               +       +  IA E+TT+VHG EE +KA  A+   F  +                
Sbjct: 121 KEHAEAPHQRLLQNTIANEVTTLVHGLEELQKAQEASQILFGRATSEAFQKLTPETFLEL 180

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            + +P  +I++  ++ G+ ++  +   +GF +S ++ARR LK NAI +N + + ++   I
Sbjct: 181 FEGVPQANINRKTINEGLDIIAALSSMSGFLSSNSDARRALKENAISVNKTKV-DQDFMI 239

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
           +         + L  GKKN+ +  + 
Sbjct: 240 QQSHLIGGQYVLLQRGKKNYFVLKIV 265


>gi|309365610|emb|CAR98450.1| CBR-YARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 455

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 44/443 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDIL---CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           D++  L +R  +        L        Q     Y G+D TA SLH G+L  L+ L   
Sbjct: 25  DYIKDLDKRKPLKHSYPADLLTKFDYELKQIQPYLYAGFDPTAESLHVGNLLILLNLIRS 84

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +PI+L+G  T+ IGDPS +   R ++ S  I  N + +           +  T+ 
Sbjct: 85  QQFGLRPIALIGEFTASIGDPSGKKSERDLLPSDVIVSNAQSVTEQVRRIFANASSDTEP 144

Query: 124 L-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++NN  WL      D  RE      + +ML  +++++RL  E+ LS+ EF+Y  +QAY
Sbjct: 145 PIIVNNNDWLEKAALRDFFRE-CKSMQLGKMLRMKTIKNRL--EKGLSYTEFSYQTMQAY 201

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-------FALTSPLLTTASGT 235
           D+  L++ + CR Q+GG DQ G++  G    ++               +  P+LT ++G 
Sbjct: 202 DWYTLSEKFGCRFQLGGYDQLGHLDFGAHYIKKRCNQSQGTDNGFAAGVCFPILTDSAGN 261

Query: 236 KMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
           K+GK+   GA+WL+ + TSP++ +Q++  + D         L+     +++         
Sbjct: 262 KLGKSEGGGALWLDPKKTSPFHLYQFFAQLHDDKAEELLLLLSLRNFEDLESSLVKH--R 319

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------- 346
            N  K I+ TE+   +      E+    A+ C      S+      +SK+EV        
Sbjct: 320 KNLGKWIVQTELAMEITKVVHGEEGLDTALRCTKAMFGSKKADLTGLSKEEVLQMFRTTV 379

Query: 347 ----SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK--------LQ 394
                  + +  L     F +        +K+ A  +N +   +    I         L+
Sbjct: 380 DLKKEEVISMGKLADLTRFGSGKGHL--LMKNGAFSVNGAKKVDPTESINSLLSVLPELE 437

Query: 395 DFDSTGNIKLSFGKKNHIICHLC 417
           D        + +GK+++ +    
Sbjct: 438 DL-----TLIRWGKRDYQLVRWI 455


>gi|153825685|ref|ZP_01978352.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149740622|gb|EDM54731.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 232

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 11/224 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +   + +  + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 -KTKIQFNSEWLSKLGA-EGMIRLASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL 224
            YD V +    +  +++GG+DQ  N++ G +L +         +
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGPKTTSGI 213


>gi|325528756|gb|EGD05818.1| tyrosyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 299

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/320 (21%), Positives = 142/320 (44%), Gaps = 26/320 (8%)

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      +  +     +    +  N  W   +   D + ++ S ++V R+L  E  
Sbjct: 1   EANAKTYFEQAALVLD----REKTEIRYNSEWSMPLGA-DGMIKLASRYTVARILEREDF 55

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++    
Sbjct: 56  TKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQE 111

Query: 220 KLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT PLL       KM K+    + ++++   P + +    +I D  +  + + L+ 
Sbjct: 112 QQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLMWRYFELLSF 168

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             M EI   R     G+   + K ++A EI    H + +AE+A                +
Sbjct: 169 RSMDEIAGFRREAEGGRNPRDFKVLLAQEIVARFHSQADAERALEDFN-HRAKGGVPDDI 227

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P+++++       + +  L+ +AG   ST+EA R+++   +KI+ + +S++ L+++  +F
Sbjct: 228 PSVTLA----GAPLAIGQLLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVEAGEF 283

Query: 397 DSTGNIKLSFGKKNHIICHL 416
                  +  GK+      L
Sbjct: 284 ------VVQVGKRRFARVTL 297


>gi|163785347|ref|ZP_02179985.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879385|gb|EDP73251.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 278

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 17/282 (6%)

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           + L  + + ++V RML  +  + R    + ++  EF Y +LQAYD V +       +++G
Sbjct: 2   EDLIRLTARYTVARMLERDDFKKRFSENKPIAIHEFIYPLLQAYDSVAIK----ADVELG 57

Query: 199 GSDQWGNIICGIDLGERL-KTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYN 256
           GSDQ  N++ G D+           A+  PLL  T    KM K+    I + +    P  
Sbjct: 58  GSDQRFNLLIGRDIQREYGIEKPQVAILLPLLVGTDGVRKMSKSYGNYIGITEP---PEE 114

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGR 313
            +    +I D  +  + K LT L   EI++M +   K      + KK +A  I    H +
Sbjct: 115 MFGKLMSIPDELMWDYWKFLTDLTEEEIEKMKEDVEKGILHPMDVKKELAMYIVERFHSK 174

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           E+A KA     +        +++P   I      + + L  L+ K GFA+S +EARR +K
Sbjct: 175 EDAVKAKEHFEKVHSKRELPENIPEPEIIISSEEKKIPLYELVYKLGFASSKSEARRLIK 234

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S A+KIN    ++   ++ L          L  GK+      
Sbjct: 235 SGAVKINGEKFTDFNFEVDLS-----KEFVLQVGKRKFARIK 271


>gi|205374491|ref|ZP_03227287.1| tyrosyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 329

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/293 (34%), Positives = 159/293 (54%), Gaps = 19/293 (6%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++  +  LR+ G +  VN ML+ +++ SRL  +  +SF EF Y ILQA DF
Sbjct: 1   MVNNYDWLGTMDVVTFLRDFGKYVGVNYMLAKDTIASRL--DSGISFTEFTYTILQALDF 58

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
             L ++Y+C+LQ+GGSDQWGNI  G+++  + +    K F LT PL+T A GTK GKT S
Sbjct: 59  NHLYEHYNCKLQIGGSDQWGNITTGLEVIRKHQEEGAKAFGLTIPLVTKADGTKFGKTES 118

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           GAIWL+ E T+PY F+Q+W N  DADVV + K  T L   +I+    A      + +A+K
Sbjct: 119 GAIWLDPEKTTPYEFYQFWINTADADVVKYLKFFTFLTQEDIESLAAAVETEPHLRKAQK 178

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGM 350
            +A E+T ++HG     +A       F   +            + +P+I +SK E    +
Sbjct: 179 ALAEEMTRLIHGEAALAQAQKITQALFSGDVKELTASEIEQGFKDVPSIEVSKAE---DV 235

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            L+ L+V+   + S  +AR  + + A+ +N    ++    +  +D        
Sbjct: 236 QLIELLVETKLSPSKRQAREDISNGAVYVNGERQTDLAYSLSEEDKVGGKFTI 288


>gi|467158|gb|AAA50922.1| tyrosyl-tRNA synthetase [Mycobacterium leprae]
          Length = 293

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 96/292 (32%), Positives = 159/292 (54%), Gaps = 12/292 (4%)

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  I+ LR++G  FS+N ML  +++R RL  +  +S+ EF+YM+LQA D+ EL + + C 
Sbjct: 1   MSAIEFLRDVGKHFSINLMLDRDTIRRRLNGQ-GISYTEFSYMLLQANDYAELHQRHGCA 59

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AIWLNKEMTS 253
           LQ+GGSDQWGNII G+ L  +     + ALT PL+T A G K+GK+  G ++WL+ EMTS
Sbjct: 60  LQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGAKLGKSTGGGSLWLDPEMTS 119

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVH 311
           PY ++QY+ N  DADV+ + +  T L   E+  + +      +   A++ +ATE+T +VH
Sbjct: 120 PYAWYQYFINTSDADVIRYLRWFTFLLPEELVELEQTTVSRPQERAAQRRLATELTVLVH 179

Query: 312 GREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           G    +    A+   F     ++         +    +++ +     G++ L+V +G + 
Sbjct: 180 GAAATQAVEHASRALFGQGELARLDEATLATALRETVVAELKPGNPDGIVDLLVASGLSP 239

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S   ARR +    + +NN  I +E+   +  DF     + L  GK+N     
Sbjct: 240 SRGAARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKRNIAGIE 291


>gi|170587925|ref|XP_001898724.1| tyrosyl-tRNA synthetase family protein [Brugia malayi]
 gi|158592937|gb|EDP31532.1| tyrosyl-tRNA synthetase family protein [Brugia malayi]
          Length = 429

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 116/433 (26%), Positives = 181/433 (41%), Gaps = 63/433 (14%)

Query: 6   SDFLSILSERGFIHQISNPRELD----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             F + L++R  I   S+P  L      + S      Y G+D TA SLH GHL  L  LF
Sbjct: 40  KQFCADLAKRNLIS-TSHPPNLSSDDFKIVSTLPDVIYAGFDPTAESLHIGHLLILTNLF 98

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
                    I+L+GG T+ +GDPS     R ++   EI + + KI     S I++     
Sbjct: 99  RAALHRCHAIALIGGATAHVGDPSGHITDRNIVPGHEIDQYVRKINLQLMSSIRF----- 153

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
                                E+   F +  ML    V+SR++    LS  EF Y ILQ+
Sbjct: 154 --------------------LEVCRDFRLGDMLRLGMVKSRMRDGSGLSCTEFLYQILQS 193

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT- 240
           YD+  L+++Y+C  Q+GG+DQ G+   G D  +R       ++  PLLT A G K+ KT 
Sbjct: 194 YDWYRLSRDYNCHFQIGGNDQLGHFDAGYDYIKRKTGKISASICLPLLTDAQGKKLSKTS 253

Query: 241 -LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                IWL++  TSP+ F+Q++      +              E              A+
Sbjct: 254 KEHSNIWLDERKTSPFTFYQHFSLQTIEE-------------IEEIEREHQANLGKWIAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGM-------- 350
           + +A E+T +VHG    + A   +   F  S+   + MPT  I +   +  +        
Sbjct: 301 EKLAEELTKLVHGSNGLKIAKQCSKMLFSDSLSELRKMPTSFIEEQFGTASVQQLFRSRF 360

Query: 351 -GLLTLI--VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF-DSTGNIKLSF 406
             +  L   V +G  +S N     +K+ A+K+N    +N    I       +  NI L  
Sbjct: 361 STIGELADKVHSGDGSSIN----KMKTGALKLNGIQFTNPDEVIDFDKICLNGKNITLVC 416

Query: 407 -GKKNHIICHLCG 418
            GK+ + +    G
Sbjct: 417 WGKRKYHLIKWIG 429


>gi|163802290|ref|ZP_02196184.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173819|gb|EDP58633.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 262

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 21/279 (7%)

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           +  + +  +V RML  +  + R    Q ++  EF Y +LQ +D V +    +  +++GG+
Sbjct: 1   MIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGT 56

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  N++ G +L +         L  PLL       KM K+    I +++    P   + 
Sbjct: 57  DQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSKSSGNYIGISEA---PSEMFG 113

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAE 317
              +I D  + S+ + L+  P+ EI +        K   + K ++A EI    H   +A+
Sbjct: 114 KIMSISDVLMWSYYELLSFRPLEEIAQFKADVEAGKNPRDIKVLLAKEIIARFHSEADAD 173

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
            A    +  F  +     MP       +   G  +  L+ +AG   ST+EA R +K  A 
Sbjct: 174 AAEQEFVNRFAKNQIPDEMPEF-----DFEAGTPVANLLKEAGLCASTSEAMRMVKQGAA 228

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           KI    +++ K   ++      G      GK+      +
Sbjct: 229 KIEGEKVADAKFAPEV------GTYVFQVGKRKFARITI 261


>gi|316970901|gb|EFV54757.1| NEDD8-activating enzyme E1 catalytic subunit [Trichinella spiralis]
          Length = 819

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 104/405 (25%), Positives = 175/405 (43%), Gaps = 52/405 (12%)

Query: 13  SERGFIHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
             RG I        L+ L S        Y G+D +  SLH G+L                
Sbjct: 31  IRRGAIKTSFPDSLLNNLESIRGVQPCIYAGFDPSGDSLHIGNL---------------- 74

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT--------- 121
                  TS +GDPS R   R  +   EIQ N + I+    S ++               
Sbjct: 75  ------ATSRLGDPSGRSVERDRLSLDEIQSNSQCIEFTLKSILRNFEKIKISLNSTNVL 128

Query: 122 -DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +L+N  W   +  +D    +G  F +  M+  + +R R+ RE  +S+ EF+Y  LQ
Sbjct: 129 STPAVLDNTDWYHQMNVLDFFDAVGRAFRLRHMMDKQCIRERIHRE-GMSYAEFSYQTLQ 187

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYD++ L + + C LQ+GG+DQ GNI  G DL         + L  PL+ +++G K+GK+
Sbjct: 188 AYDWLHLYEKFGCLLQIGGADQTGNIHSGHDLIRFFHNQSAYGLLVPLMLSSTGEKIGKS 247

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
           +  ++WL+   TS + F+QY+  + D +  S  K  +    ++++R      Q  E   A
Sbjct: 248 VGSSLWLSSSRTSSFVFYQYFLQLTDEEAKSMMKLFSFCSEADLERILDDHCQQPEKRIA 307

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-------------QHMPTISISKDE 345
           ++ +A ++T +VH       A       FD  +H              + +P + +S+  
Sbjct: 308 QRFLADQLTLLVHSESGLALAKRITEILFDHRLHGIGDLDENDLNILCREVPGVQLSRQA 367

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           +   +  ++L +KAG     N A R +      +NN  I+N  + 
Sbjct: 368 L--PISAISLALKAGCFDDVNTAERTINQGGFHVNNFKITNPTIV 410


>gi|254448516|ref|ZP_05061976.1| tyrosyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261899|gb|EDY86184.1| tyrosyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 273

 Score =  186 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 18/286 (6%)

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            +    + +  + +  +V RML  +  + R    QS++  EF Y ++Q +D V L     
Sbjct: 1   MNELGTEGMIRLAAKQTVARMLERDDFKKRYTSGQSIAIHEFLYPLVQGWDSVALK---- 56

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G +L           +T PLL       KM K+L   I +++  
Sbjct: 57  ADIELGGTDQKFNLLMGRELQREEGESPQVVITMPLLEGLDGVQKMSKSLGNYIGIDE-- 114

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE--IDRMAKLQGKEINEAKKIIATEITTM 309
            SP + +    +I D  +  + + L+  P+ E    R    +G    + K  +A E+   
Sbjct: 115 -SPDDIFGKVMSISDELMWRYFELLSFRPLDEVVQLRADVEKGANPRDIKFQLAEELIAR 173

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H +E AE+A    +  F      Q M  + I    V  G+GL  L+  A    ST++A 
Sbjct: 174 FHSQEAAEQAREQFVARFQKGAMPQEMDELEIP---VGEGLGLPALLKAAKLCPSTSDAM 230

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +K  A+KI+   ++N+          S        GK+      
Sbjct: 231 RMIKQGAVKIDGEKVANKGYV-----CVSGVTAVYQVGKRRFARVT 271


>gi|224095535|ref|XP_002197393.1| PREDICTED: similar to tyrosyl-tRNA synthetase 2, mitochondrial
           [Taeniopygia guttata]
          Length = 442

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 103/364 (28%), Positives = 167/364 (45%), Gaps = 26/364 (7%)

Query: 78  TSIIGDPSFRDES------RRMMRSQEIQENIEKIKGIFSSFIKYGTGKT-------DAL 124
           TS  GD   +         R      E+ +   + +      +K              A 
Sbjct: 75  TSTSGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDNIVEKLKRKLFWEPGAGRLGRAT 134

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  WL     +  L   G    +  +LS +S ++RL   + +S  EF Y  LQAYDF
Sbjct: 135 LLDNARWLGREPLLRFLGGAGGRLRMGTLLSRQSCQARLHSAEGMSLAEFLYPALQAYDF 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L +++ CR+Q+GG DQ GNI+ G +L  ++    +F +T PL+T+ SG K+GKT   A
Sbjct: 195 LHLHRHHGCRIQLGGHDQMGNIMSGYELVTKMTGADVFGITVPLITSTSGDKLGKTAGNA 254

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKII 302
           +WLN++ TSP+  +Q++    D  V  + K  T LP++EI  + ++  KE  +   +K +
Sbjct: 255 VWLNRDKTSPFELYQFFVRQQDNIVEKYLKLFTFLPLAEIAHIMEMHAKEPEKWGPQKRL 314

Query: 303 ATEITTMVHGREEAEKAATA----------AMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           A E+T +VHGRE  E A             A+E        +     + ++  +  GM +
Sbjct: 315 AAEVTKLVHGREGLESAKRCTKALYYSSVEALEEMSDQELQELFRQATSAELMLEPGMTV 374

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNH 411
           L L  KA          R +    + IN + ++N +  + L Q     G   L  GKKN+
Sbjct: 375 LDLCRKANAIPDGPSGYRKITDGGVSINGNRVTNPETVLILGQHILKNGVSLLRVGKKNY 434

Query: 412 IICH 415
            I  
Sbjct: 435 YIIK 438



 Score = 44.0 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           +    +F +T PL+T+ SG K+GKT   A+WLN++ TSP+  +Q++    D  V    ++
Sbjct: 61  MTGADVFGITVPLITSTSGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDNIVEKLKRK 120

Query: 276 LTTLP 280
           L   P
Sbjct: 121 LFWEP 125


>gi|289812080|ref|ZP_06542709.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 160

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 1/157 (0%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
              +QG +  Y G+D TA SLH GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+ 
Sbjct: 3   ERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKA 62

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             R++   + +QE + KI+   + F+ +  G+  A+  NN  W  S+  +  LR+IG  F
Sbjct: 63  AERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHF 122

Query: 149 SVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDF 184
           SVN+M++ E+V+ R  + +Q +SF EF+Y +LQ YDF
Sbjct: 123 SVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 159


>gi|256089206|ref|XP_002580705.1| tyrosyl-tRNA synthetase [Schistosoma mansoni]
 gi|238666308|emb|CAZ36944.1| tyrosyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 481

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 155/343 (45%), Gaps = 18/343 (5%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           IS+ + L    +    + Y G+D T  SL  G+L  +  L     +G   ++++GG T I
Sbjct: 18  ISSEKHLLDFETTRNFSVYAGFDPTCDSLQLGNLVAVCGLLRCHLSGKDIVAVVGGSTGI 77

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-----------TDALMLNNE 129
           +GDPS R + R      +   N   I+      I                     ++NN 
Sbjct: 78  LGDPSGRIKKRDYQSLGQYASNSTLIEHSLDKIIYNYWTHIVPALPISGKLGSVHVVNNS 137

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL   K +D+  E+   F ++ +L  ESV+ R++   ++   EF Y I+QA DF+ L +
Sbjct: 138 DWLTHKKVMDVSCEVLPHFKLSELLEKESVKIRMESGNTMDLGEFFYPIVQAIDFLYLHE 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL------SG 243
            ++C +Q+GG DQ GNI CG++L  R    + F LT PLLTT  G K+GK++        
Sbjct: 198 KFNCYMQVGGHDQIGNITCGLNLIYRKLGRRAFGLTVPLLTTPDGQKLGKSVSNSECGMD 257

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADV-VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            IWL  +   PYNF+Q   N+ D+ +     ++LT     EID++     +++       
Sbjct: 258 TIWLMSKKLKPYNFYQKILNLPDSIISDKLVRQLTFFGPDEIDQLLTDHKEKLVSTFLAY 317

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
           A + + +         +   + +   +   S  +    ++  E
Sbjct: 318 ALQASELATRIFFPMSSVNCSDDNLPLDKSSMEIIQNELNSSE 360


>gi|311894756|dbj|BAJ27164.1| putative tyrosyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 471

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 87/361 (24%), Positives = 147/361 (40%), Gaps = 20/361 (5%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
             L  L ++G  +T   G D T + +H GH   ++L   LQ+ GH+ + L+G  T+ IGD
Sbjct: 70  DRLAELLAEGRPLTVKFGIDPTGAEVHLGHAVPMILASRLQRMGHRVVFLVGDITARIGD 129

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS R   R  +   +++ N+   +    +F  +      A    N  WL  +     L  
Sbjct: 130 PSGRSAERPPLTEDDVRRNVATYRQQVGAFFDF----ERAEFRFNSEWLEPMTLPRFLEV 185

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +      +  L  E  R+RL     L+  E  Y ++ A D VEL    D  +++GG DQ 
Sbjct: 186 LAR-LPASAALQREDFRNRLAEGSGLTLAELVYSVVMALDSVEL----DADVELGGLDQL 240

Query: 204 GNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            N+     +           L + L+  T  +G KM K+ +  + L          +   
Sbjct: 241 LNLQMCRRVMTATGRQPEVVLATGLIEGTDGTGAKMSKSRNNYVGLA---FPAEEMFGRL 297

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---AKKIIATEITTMVHGREEAEK 318
            +  D  +  + + LT L   EID +              K ++A  +T  VHG   A  
Sbjct: 298 MSCADRLLPGYLRALTELLDEEIDLLLAQVDDGRRHPMAVKTLLAAAVTATVHGEPAALA 357

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAI 377
           A  +    F +  +SQ  P  ++   E      L  L+V+ +G   S N+ RR  ++  +
Sbjct: 358 ARDSFRARFSVRRYSQAGPLPTVDPAE-HGAATLGELLVRVSGELPSLNQVRRVAEAGGL 416

Query: 378 K 378
           +
Sbjct: 417 R 417


>gi|225012586|ref|ZP_03703021.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
 gi|225003119|gb|EEG41094.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
          Length = 158

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 6/162 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP   ++F+  L  RG +H I    E      +     YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP---TNFVQELQWRGLLHDIMPETE--TFLLEKSSRGYIGFDPTADSLHIGSLVQIMIL 55

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
              Q+ GH PI L+GG T +IGDPS + + R ++    +++N   I+     F+ + +  
Sbjct: 56  MHFQRHGHAPIILVGGATGMIGDPSGKSDERNLLDQVTLEKNCTGIQNQLERFLDFDSSL 115

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
              A+++NN  W+ S   ID  RE+G   +VN M++ ESV+S
Sbjct: 116 PNPAILVNNYDWMKSYSLIDFSREVGKHITVNYMMAKESVKS 157


>gi|302415799|ref|XP_003005731.1| tyrosyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261355147|gb|EEY17575.1| tyrosyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 561

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 87/443 (19%), Positives = 153/443 (34%), Gaps = 66/443 (14%)

Query: 7   DFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +   I  ERGFI  ++  P  +  L     + AY+G D TA SLH GHL  +M +FW+  
Sbjct: 62  NLWEIFEERGFIKDVAGRPELIKELMRTKRIGAYVGVDPTAPSLHLGHLLPMMPVFWMYL 121

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------KYGTG 119
            G + ++L+GG T+ IGDP+ R  SR +M + EI  NI +I              K+  G
Sbjct: 122 HGFRAVTLVGGATARIGDPTGRTTSRAIMSNSEISTNITRIHYQMKKLWDNIELEKHKYG 181

Query: 120 KTDA-----LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                     ++NN TW  S+   D+++ +G +  +  MLS ++V+++++    ++  EF
Sbjct: 182 YKKTWSMSRHLVNNNTWWQSLSMYDVMKRLGRYLRMGPMLSRDTVKTKMESGDGMAVAEF 241

Query: 175 NYMILQAYDFVELAKNYDCRLQMG---GSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            Y ++QA        +     Q+G   G+  W        L            T      
Sbjct: 242 MYPLMQAPRRGRGGASSCSLPQVGKSAGNAVWLETNHDERLQPVQLPRAAVPTT------ 295

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
              +     +S     +    +P +  Q   +       + A      P+          
Sbjct: 296 --RSSSSSKVSFTFLAHSPRITPDSMEQQRASTPPQARPAPAPNS---PLKVPHASCTAP 350

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
                E ++   +       G   +  AA  A                            
Sbjct: 351 RGPFREQQQAPPSCTARAGDGSPPSTGAAGRAPPMRPAR--------------------- 389

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD-------------- 397
              ++  AG A S ++A R  +     +  +   +    +   + D              
Sbjct: 390 -PKILFAAGLADSASDAHRLCRQQGAYVAAAPGKD-MRSLTPGNLDWTPVKLWRPEEVSR 447

Query: 398 ---STGNIKLSFGKKNHIICHLC 417
                  + L  GK N  I  + 
Sbjct: 448 FLVDDRVLILRKGKHNVRIIEVV 470


>gi|255025009|ref|ZP_05296995.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 151

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDFE-GDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           NN  W   +  +D LR+ G  F+VN MLS +
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKD 151


>gi|331241372|ref|XP_003333334.1| hypothetical protein PGTG_15118 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312324|gb|EFP88915.1| hypothetical protein PGTG_15118 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 357

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 95/335 (28%), Positives = 156/335 (46%), Gaps = 44/335 (13%)

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  ++ L  +G    V+ ML+ +SV+ RL+    +SF EF Y +LQAYDF +
Sbjct: 22  NNLEWMKDLSLLEFLGSVGRVARVSAMLARDSVKQRLESGSGISFTEFTYQLLQAYDFAQ 81

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-----------------------FA 223
           L   Y C +Q+GGSDQ+GNI+ GI+L  +L++                          F 
Sbjct: 82  LRSRYRCTIQLGGSDQYGNIMSGIELMSKLQSSPASDPVAQTRSRESDPETTSNRNVAFG 141

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           LT PLLTT  G K GK+   A+WL+ ++TSP  F+Q + +I D++V+ + K LT +P  E
Sbjct: 142 LTIPLLTTREGEKFGKSAGNAVWLDPKLTSPVEFYQTFISIPDSEVLKYLKMLTFVPTEE 201

Query: 284 IDR---MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           +D+    +        E +K++A E+T +VHG +   +A       F      +      
Sbjct: 202 LDQCLQSSTKNPDSKRELQKLLAREVTLLVHGEKGLRQAIQGTEFLFPTESKLESDSRDH 261

Query: 341 ISKDEVSR-----------------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            SK+++                   G  L  L V +    S  EARR +K+  ++ N+  
Sbjct: 262 WSKEKLDETFENSPNWIELKSFEVIGRSLGDLSVTSKLFQSKGEARRAIKAGGVRFNHRQ 321

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHII-CHLC 417
           I++    +       +  + L  GK  +     + 
Sbjct: 322 ITDFDQLVSQHHLIDSAYLLLMRGKSGYYKVVKVV 356


>gi|330955034|gb|EGH55294.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 182

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 5/177 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +          +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPA----KTEVAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           +           + S ++V RML  +    R K  QS++  EF Y ++Q YD V L 
Sbjct: 126 M-DQLSPADFIRLSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALK 181


>gi|261885062|ref|ZP_06009101.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 307

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/328 (24%), Positives = 135/328 (41%), Gaps = 27/328 (8%)

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           M    I +N +  K      +     ++   ++ N  WL  +   D L  + S F+V RM
Sbjct: 1   MDDDTIAKNAKTYKEQVFKILD----ESKTEVMFNSAWLSKLGA-DGLIALASTFNVARM 55

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  +    R K E  ++  EF Y +LQ YD V +     C ++MGG+DQ  N++ G  LG
Sbjct: 56  LERDDFTKRYKNETPIAISEFLYPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLG 111

Query: 214 ERLKT-PKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                  +   +  PLL       KM K+L   I + +   S  + +    +I D  +  
Sbjct: 112 RTYGIGKEQAIIMMPLLVGLDGVNKMSKSLGNYIGVTE---SANDIFAKTLSISDDLMWV 168

Query: 272 FAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           + + L+     +I               + K+ +A EIT+  HG  EA  A         
Sbjct: 169 WYELLSDKSSDDILNLKADVSSAKLHPKKVKENLALEITSRFHGISEAGAAKDEFDRVHS 228

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                  MP   I KDE    + ++  +      +S  EARRH+K++A+ +N   + +E+
Sbjct: 229 KKELPSDMPEFEIVKDE----IWIVEALSNCALCSSNAEARRHIKADAVSVNQQKVIDEQ 284

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           L++        G   L  GKK +    +
Sbjct: 285 LKLAK------GEYILQVGKKTYAKLKV 306


>gi|156835905|ref|XP_001642206.1| hypothetical protein Kpol_1074p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156112662|gb|EDO14348.1| hypothetical protein Kpol_1074p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 351

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 167/352 (47%), Gaps = 30/352 (8%)

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGK------------TDALMLNNETWLCSIKYIDLL 141
           M S+   +N+  I     +F                       ++NN +W   +K +D L
Sbjct: 1   MDSETRIDNVSAIGRQLENFFTTAYRYCERRGIEKEIDLRRFQVVNNHSWWKDVKMLDFL 60

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
              G    +  ML+ +S+ +R+     L F EF Y +LQAYDF  L KN    +Q+GG D
Sbjct: 61  GNYGRHIRIQNMLARDSISARIGTSDGLGFNEFTYQVLQAYDFYHLYKNEGVSIQVGGGD 120

Query: 202 QWGNIICGIDLGERLKTP----KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           QWGNI  GID   R++        +A+TS LLTTA+G K GK+   AI++N+++ SPY+ 
Sbjct: 121 QWGNITAGIDFISRVEPNSKKSPPYAITSSLLTTANGDKFGKSAGNAIFINRDINSPYDI 180

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREE 315
           +QY+ N++DAD+  F K  T L + +I+ + K+  K+    E +K +A E+T ++HG E 
Sbjct: 181 FQYFLNVEDADIEKFLKIFTLLSLEDINSIMKMHNKDPKLREGQKTLAREVTELIHGYEN 240

Query: 316 AEKAATAAMECFDMSIHSQHMPTISI--------SKDEVSRGMGLLTLIVKAGFATSTNE 367
              A   +   F+  +    +   S+        + + V     L+ +I K     S +E
Sbjct: 241 CRFAEILSDMLFNDKLKDSSVSVDSLLDAAYVAGNYETVPTRSSLVEIISKVTNC-SNSE 299

Query: 368 ARRHLKSNAIK--INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A+R +    +   ++   +++  + I          + L  GK+   + ++ 
Sbjct: 300 AKRRISQGGVYLGLDRIQVTDPSVSIN-DYILQNEVLILRTGKRKCYVVNMS 350


>gi|33416567|gb|AAH55576.1| Wu:fi41d10 protein [Danio rerio]
          Length = 404

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 85/418 (20%), Positives = 145/418 (34%), Gaps = 84/418 (20%)

Query: 15  RGFIHQISNP----RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG +           E+  L   G  + Y G+D TA SLHAG+L  ++ L   +  GH  
Sbjct: 50  RGLLKDSFPEVAAQAEIPDLLRSGPQSIYCGFDPTADSLHAGNLLAIIGLLHFRSAGHHI 109

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GG T+ IGDPS R   R  +    +QEN   I         +              
Sbjct: 110 IALLGGATAQIGDPSGRQTERERLSPATVQENARGILESLHRIFTH-------------- 155

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
               + +      +G    +N                       N+   + YD +E    
Sbjct: 156 --HELYFCPDSSRLGRLTVLN-----------------------NHSWYKDYDLLEFFSE 190

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                +MG      ++        RLK+ +  + T                      + +
Sbjct: 191 VGRSFRMGTMLSRHSV------QTRLKSAEGMSFTE--------------------FSYQ 224

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITT 308
           +   ++F+Q    + D  V  + K  T L +SE++ + + Q K+     A K +A E+T 
Sbjct: 225 LFQAFDFYQ--LRLPDNSVERYLKLFTFLSLSEVENLMEQQRKDPGKRIAHKRLAAEVTK 282

Query: 309 MVHGREEAEKAATA----------AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           +VHG++  E A             A+E    +   +        +  +  G  +L    +
Sbjct: 283 LVHGKDGLESAKRCTTALYHSSIEALEQMSDTELQEIFREAPFHEFFLEPGTTVLDACRR 342

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKLSFGKKNHIICH 415
           A          + +K   + IN+    N +   I  Q   S G   +  GK+N  I  
Sbjct: 343 AQSIPDGPRGYQMIKDGGVWINHQRAENPEQVLIGGQQILSNGLSLIRVGKRNFHILK 400


>gi|16904661|dbj|BAB71952.1| putative tyrosine-tRNA synthetase [Rhodococcus sp. T09]
          Length = 232

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 11/229 (4%)

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AIWLNKEMTSPYNF 257
           GSDQWGNII G++L  R+    +  LT PL+T+A G K GK+  G ++WL++EMTSPY +
Sbjct: 1   GSDQWGNIIAGVELNRRIDAESVHGLTVPLVTSADGKKFGKSTGGGSLWLDQEMTSPYAW 60

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREE 315
           +QY+ N  DADV+ + +  T L   E+  +     +     EA++ +A E+TT+VHG   
Sbjct: 61  YQYFVNTGDADVIKYLRWFTFLTAEELAELETATAERPHAREAQRRLAAEMTTLVHGEAN 120

Query: 316 AEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
                 A+   F  +             +   S+++       G++ L+V +G   S   
Sbjct: 121 TRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPAGIVDLLVLSGLCESKGA 180

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR +K     +NN  IS+E       D      + +  GK+N     +
Sbjct: 181 ARRTVKEGGASVNNQKISSEDWTPAPTDLLHGTWLVIRRGKRNFAGIKV 229


>gi|126640129|ref|YP_001083113.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 324

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 140/339 (41%), Gaps = 21/339 (6%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDP+ +  +R  +  ++++ N +  +      +          +  N  W       D
Sbjct: 1   MIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDP----NKTKVRFNSEWFNQKSAAD 56

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           L+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L    +  +++GG
Sbjct: 57  LI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIAL----EADVELGG 111

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  N++ G  L  R        +T P+L       KM K+L   I +     +P   +
Sbjct: 112 TDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGVF---DAPGAMY 168

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEA 316
           Q   ++ D+ +  +   L+   + EI  +        N  E K+I+A E+    H  E A
Sbjct: 169 QKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQEVKRILALELVERFHDAEAA 228

Query: 317 EKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
             A  +A             P ++IS+ E    + + T++  AG   +   A+  +   A
Sbjct: 229 ANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLNPNAAAAKDAVARGA 288

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +K++ +++ +    +K       G   +  GKK      
Sbjct: 289 VKVDWNVV-DASFSVKE-----NGTFIIQSGKKAIARVT 321


>gi|317478183|ref|ZP_07937351.1| tyrosyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316905635|gb|EFV27421.1| tyrosyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 235

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 74/232 (31%), Positives = 109/232 (46%), Gaps = 17/232 (7%)

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           SDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG IWL+   TSPY F+Q
Sbjct: 1   SDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESGNIWLDPRYTSPYKFYQ 60

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAE 317
           +W N+ D D   + K  T L   EID +         +   +K +A E+T MVH  E+  
Sbjct: 61  FWLNVSDEDAKRYIKIFTALSKEEIDALTAEHDAAPHLRVLQKCLAKEVTIMVHSEEDYN 120

Query: 318 KAATAAMECFDMSIH--------------SQHMPTISISKDEVSRGMGLLTLIVK-AGFA 362
            A  A+   F  +                 + +P   IS+D ++ G+  + L V  A   
Sbjct: 121 AAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALAAGVKAVDLFVDNAAVF 180

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  E R+ ++   + +N   ++     I   D      + +  GKKN+ + 
Sbjct: 181 ASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQRGKKNYYLI 232


>gi|145519105|ref|XP_001445419.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412874|emb|CAK78022.1| unnamed protein product [Paramecium tetraurelia]
          Length = 395

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 21/330 (6%)

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E R+      I EN+EKI+    S  +         +L+N  +    K ID + ++G  F
Sbjct: 70  EERKEPDLVVIHENLEKIRKQLESIGQPLQ------ILDNMDFYRETKLIDFVSKVGRQF 123

Query: 149 SVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +N +L+ + +  RL   +  LS  EF Y ILQ+YDF  L + YDC LQ+GGSDQWGNI 
Sbjct: 124 RMNSLLNKDHINKRLNSGDDGLSLTEFFYTILQSYDFAYLNEKYDCTLQIGGSDQWGNIT 183

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            G D  ++    +++ +T+PLLT  +G K GK+   A++L+   +S +N  QY  N+ D 
Sbjct: 184 NGCDFVKKEYKKQVYGITTPLLTDKNGQKFGKSEGNALFLDA--SSKHNMKQYLLNLADD 241

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAME 325
            +  F   LT L   +ID + +   +      A+K ++ E+  M++G E + +       
Sbjct: 242 SMRDFLLMLTFLKEEQIDSVMEQHKQSPEKRVAQKCLSDELLRMIYGEESSAEKNQILYG 301

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGL-----LTLI-VKAGFATSTNEARRHLKSNAIKI 379
                + +          +E+ + + +       L+ V     +S +E RR L+   I I
Sbjct: 302 LRRDRLMNMSAQEFDRLAEEIDKDVVIRVAKQTQLMEVLLKLRSSKSEIRRLLQQGGILI 361

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           N+  +     Q++         + L  GK+
Sbjct: 362 NDQKVE----QLEQAQLLHDKYMLLRIGKR 387


>gi|328479052|gb|EGF48517.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 325

 Score =  166 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 13/302 (4%)

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
           +   ++ ++   G  D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E
Sbjct: 10  QEKLTAQMENLFGTDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--E 67

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FAL 224
             +S+ EF Y ILQ+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P    + L
Sbjct: 68  TGISYTEFTYQILQSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGL 127

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T+PL+  A GTK GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI
Sbjct: 128 TNPLMLKADGTKFGKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEI 187

Query: 285 DR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
                A     E   A++ +A  +T  VHG++  ++A + +   F   +       I   
Sbjct: 188 AELVEATKTHPEKRAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKQG 247

Query: 343 KDEVS------RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             +            ++T +V       S  +AR  +++ AI IN +   +   ++    
Sbjct: 248 FKQFPTVEAPQTAENIVTWLVDTTKIEPSRRQAREDIQNGAITINGTRQRDLDFEVDPST 307

Query: 396 FD 397
             
Sbjct: 308 HL 309


>gi|326912301|ref|XP_003202492.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 271

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 85/270 (31%), Positives = 138/270 (51%), Gaps = 19/270 (7%)

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           RL+  + +S  EF Y  LQAYDF+ L +++ CR+Q+GG+DQ GNI+ G +L  ++    +
Sbjct: 1   RLRSAEGMSLAEFLYPALQAYDFLHLHRHHGCRVQLGGADQMGNIMSGYELVTKMTGTDV 60

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           F +T PL+T+ +G K+GKT   A+WLN++ TSP+  +Q++    D  V  + K  T LP+
Sbjct: 61  FGITVPLITSTTGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDDIVEKYLKLFTFLPL 120

Query: 282 SEIDRMAKLQGKEINEA--KKIIATEITTMVHGREEAEKAATA-------------AMEC 326
            EID + ++  +E  +   +K +A E+T +VHGRE  E A                AM  
Sbjct: 121 EEIDHIMEMHAREPEKWGPQKRLAAEVTKLVHGREGLESAKRCTKALYHSSVEALEAMSD 180

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            ++    +  P+  +    +  GM LL L  KA          + +    + +N   ++N
Sbjct: 181 QELQELFRQAPSAEL---ILEPGMTLLDLCRKANAIPHGPSGYQKITDGGVSVNGIRVTN 237

Query: 387 EKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
            +  + L Q     G   L  GKKN+ I  
Sbjct: 238 PEAVLILGQHILKNGVSLLRIGKKNYYIIK 267


>gi|237756624|ref|ZP_04585139.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691222|gb|EEP60315.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 251

 Score =  161 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 19/262 (7%)

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             + R K    +S  EF Y +LQAYD V +       +++GGSDQ  N++ G D+ +   
Sbjct: 1   DFKKRFKENIPISIHEFIYPLLQAYDSVAIK----ADVELGGSDQRFNLLIGRDIQKEYG 56

Query: 218 TP-KLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 A+  PLL  T    KM K+    I + +    P   +    +I D  +  + + 
Sbjct: 57  IESPQVAILLPLLVGTDGVKKMSKSYGNYIGITQP---PEEMFGKIMSISDELMWQYWEL 113

Query: 276 LTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           LT L + EI+++ +   K      E KK +   I    H +E+A KA     +       
Sbjct: 114 LTDLTLDEINKLKEDVQKGILHPMEVKKQLGMYIVERFHSKEDAIKAREHFEKVHSKKEI 173

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            + +P       E+     L  +I     A +  EA+R +K   +K+N   I++   +  
Sbjct: 174 PEEIPVFK--ASEIGTETELFEIIFNLKLAETKAEAKRLIKQGGVKVNGEKITDPMYKPD 231

Query: 393 LQDFDSTGNIKLSFGKKNHIIC 414
           L          +  GK+     
Sbjct: 232 LT-----KEFIIQVGKRKFAKI 248


>gi|304407892|ref|ZP_07389542.1| Tyrosine--tRNA ligase [Paenibacillus curdlanolyticus YK9]
 gi|304342911|gb|EFM08755.1| Tyrosine--tRNA ligase [Paenibacillus curdlanolyticus YK9]
          Length = 276

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 18/283 (6%)

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
              + E+ S  +V RML  +    R    Q +   EF Y ++QAYD V L    +  +++
Sbjct: 3   FQDVLELASKLTVARMLERDDFAKRYGNSQPIHIHEFFYPLMQAYDSVSL----ESDIEI 58

Query: 198 GGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPY 255
           GG+DQ  NI+ G  L     +     A+  PLL       KM K+L   I +N+    P 
Sbjct: 59  GGTDQTFNILMGRTLQGAFGSKDGQVAILMPLLEGLDGVQKMSKSLGNYIGINE---EPN 115

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHG 312
             +    +I D  ++ + +  T++ + E+ ++ +          + K  +A  +  M HG
Sbjct: 116 EIFGKTMSIPDELMLKYYELSTSITIEELQQLKQDLQAGDVHPRDVKVQLAKHLVRMYHG 175

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRH 371
            + AE+A       F        +    +  + +  G + +  L+V  GFA ST+EARR 
Sbjct: 176 EQAAEQAEQHFNLVFQKRALPDQIDEAHVGGELLEEGRISISKLLVTLGFAASTSEARRS 235

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +   A+KIN   + +    + +Q  D      +  GK+     
Sbjct: 236 VAQGAVKINEVKLLDPNESVVIQSGD-----IVQAGKRKFAKI 273


>gi|148989918|ref|ZP_01821201.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924703|gb|EDK75788.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 109

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/107 (40%), Positives = 59/107 (55%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFL 109


>gi|84998594|ref|XP_954018.1| tyrosyl-tRNA synthetase [Theileria annulata]
 gi|65305016|emb|CAI73341.1| tyrosyl-tRNA synthetase, putative [Theileria annulata]
          Length = 520

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 105/522 (20%), Positives = 193/522 (36%), Gaps = 127/522 (24%)

Query: 13  SERGFIHQISNPRELDILCSQGVV---------TAYIGYDLTASSLHAGHLTQLMLLFWL 63
            ER  I Q ++  +LD L +             + Y G D T   +H G L QL+LL   
Sbjct: 1   MERSMISQSTDFVKLDQLLTSYQTQNFNNSMYNSIYYGIDCTNDFIHEGTLFQLLLLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI------------EKIKGIFS 111
                  + ++GGGT+++GDPS++   R           +            E+     +
Sbjct: 61  LSEKFNVVLVIGGGTTLVGDPSYKLR-RNRNDKFYFSNFVLNKDKSEFDTTNEQSIEQIA 119

Query: 112 SFI------------------------------------KYGTGKTDALMLNNETWLCSI 135
           + I                                              ++NN      +
Sbjct: 120 TKILSLPIKIDNTSPDNNNNYALPKVVRVSDLSTDLDVSSEMCNPYRVFIVNNRDIYNRV 179

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--------LSFLEFNYMILQAYDFVEL 187
             ++ L  +    +V RMLS + ++ R   +          +   E  YM LQA DFV L
Sbjct: 180 NLMEYLETVARNMNVGRMLSRDCIKIRTVDKDGTGYKKSINMDLSELMYMSLQAMDFVYL 239

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           A+N++C++Q+GG+DQ GNII GI+L   L    +F +T+PLL    G K+ KT S     
Sbjct: 240 AENFNCKIQLGGNDQLGNIISGIELASSLGIGNIFGITTPLLKDKFGEKISKTGSNCFLK 299

Query: 248 NKEMTSPYNFWQYWRNIDD--------------------ADVVSFAKRLTTLPMSEIDRM 287
                SP+ FW ++R++DD                      + S+ K  T + + +I   
Sbjct: 300 ITNKISPHEFWSHFRSVDDSVLEKYYHYLYSYIYIWPINNILYSYLKWFTDVSLDKIKET 359

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-------------- 333
                   N  K ++A E+T +++G +  E      M      +                
Sbjct: 360 MAEH---YNSGKVLLADELTRLLYGNQMVELIHKFCMSKQFSELKPFLTNFDTNMEEFES 416

Query: 334 -----QHMPTISISKDEVSR-GMGLLTLIVKAGF-------ATSTNEARRHLKSNAIKIN 380
                + +P I+++  ++S+ G+ LL ++              S    ++ +K    ++N
Sbjct: 417 FINFSKAVPHINLTSQQLSKVGVKLLEVLDAVRVPQFSNACFHSN---KKFIKEGGCRVN 473

Query: 381 NSIISNEKLQIKLQDF-------DSTGNIKLSFGKKN-HIIC 414
            +++++    +   D        +    I +  G +  + + 
Sbjct: 474 GNVVTDVNYTLTEDDVVKLTSEGNHYKYISIQMGNRRLYFLI 515


>gi|218678007|ref|ZP_03525904.1| tyrosyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 180

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 85/177 (48%), Positives = 121/177 (68%)

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+ SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE 
Sbjct: 1   KSASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEV 60

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           KKI+ATE+T ++HGR  AE AA  A + F+    S+++P++ I   E+  G+GLL+L+V+
Sbjct: 61  KKILATEVTAILHGRPAAELAAETARKTFEEGGLSENLPSVDIPATELDGGIGLLSLMVR 120

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG A S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 121 AGLAGSNGEARRHIQGGAVRINDEAVSDERRLIGSNEITADGVIKLSLGKKKHILIR 177


>gi|258597269|ref|XP_001347852.2| tyrosine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|254832636|gb|AAN35765.2| tyrosine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 561

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 97/325 (29%), Positives = 152/325 (46%), Gaps = 42/325 (12%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC--------SQGVVTAYIGYDLTASSLHAGHL 54
             KS  L  L ER  IH +S+ R +D +          +   + Y G DLT   LH G+L
Sbjct: 44  DIKSKALKKLYERKLIHYVSDIRNIDKILYHNENEKEKKNRKSVYAGIDLTCKYLHLGNL 103

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI----- 109
             L+ L  L+      I L+G  T+ IGDPSF+   R+    ++I EN E I+       
Sbjct: 104 VPLITLDILRNHNTDVIILLGNSTTQIGDPSFQKVERQKTLEKDILENEENIRRTIIELF 163

Query: 110 ---------FSSFIKYGTGKTDALMLNNET------------WLCSIKYIDLLREIGSFF 148
                     +  IK    + D   +                W   +  ID L+  G +F
Sbjct: 164 LQREICEEDMNELIKKSNIERDKEFIYESDNKGSLIILKNSLWYDKMNIIDFLK-YGEYF 222

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           S+N++L  E   +++K+   L+  + NY+ LQ++DF+ L   +   +Q+GGSDQWGNI  
Sbjct: 223 SINKLLRKECFLNKIKKN--LTLKDLNYITLQSFDFLHLFNKFKTCIQIGGSDQWGNIQS 280

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-----AIWLNKEMTSPYNFWQYWRN 263
           GI+L + +   +L+ LT+ LL   +  K  K+         IW++K   SPY FW + RN
Sbjct: 281 GIELAQYISNTQLYGLTTNLLVYKNNIKYSKSQFNENKRLPIWIDKNYNSPYLFWNFLRN 340

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMA 288
           ++D  V S+   LT L ++    + 
Sbjct: 341 VEDQKVQSYIDMLTNLKININQEIE 365



 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 62/150 (41%), Gaps = 11/150 (7%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-- 335
               S    + K   ++IN+AKK ++  +T+ + G    +K         +   H  +  
Sbjct: 411 HNNYSNDISLEKSYEEKINQAKKQLSDSVTSYIFGEHTVKKIHKMKDVLKNNEFHKINNI 470

Query: 336 -----MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 P + I+ + +++  + +  L+ K   A++  EA+  +  N I +N  +I++ K 
Sbjct: 471 DDIKVFPYVEITMEHINKKQINISDLLKKFDIASTNKEAKEKISQNCIYLNELLINDSKY 530

Query: 390 QIKLQDFD---STGNIKLSFGKKNHIICHL 416
            + + +F    +     L  GK+      +
Sbjct: 531 SLNINNFIKLHNNYYAILRLGKRTSYSIII 560


>gi|23007297|ref|ZP_00049230.1| COG0162: Tyrosyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 233

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 117/213 (54%), Positives = 153/213 (71%), Gaps = 2/213 (0%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
            R+Q LSFL FNYMILQ+Y FVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ 
Sbjct: 1   MRDQYLSFLVFNYMILQSYVFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYG 60

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           LT PLLTTASG KMGKT +GA+WL+  M S Y++WQ+WRN +DADV  F K  T LP+SE
Sbjct: 61  LTCPLLTTASGAKMGKTAAGAVWLDAGMLSAYDYWQFWRNTEDADVARFLKLFTLLPLSE 120

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           IDR+A LQG EINEAK I+ATE T ++HG E AE+AA  A + F     +  +P++++ +
Sbjct: 121 IDRLAALQGAEINEAKAILATEATRLMHGTEAAEQAAETARKTFVEGTLAASLPSVAVPR 180

Query: 344 DEVSRGMGLLTLI--VKAGFATSTNEARRHLKS 374
             +  G+G+LT      A    ST+EARR +++
Sbjct: 181 SVLEAGLGVLTAFGPEHAKLVPSTSEARRQIRA 213


>gi|93359602|gb|ABF13332.1| tyrosyl-tRNA synthetase [Streptococcus salivarius]
          Length = 208

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 15/209 (7%)

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                +T PL+T ++G K GK+   A+WL+   T+PY  +Q+W N+ D D V F K  T 
Sbjct: 2   KSGHVITVPLITDSTGKKFGKSEGNAVWLDATKTTPYEMYQFWLNVMDDDAVRFLKIFTF 61

Query: 279 LPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT----------AAMEC 326
           L + EI+       Q +    A+K++A E+ T+VHG+E  E+A             A+  
Sbjct: 62  LSLEEIEEIGKEFDQARHQRLAQKVLAREVVTLVHGKEAYEQAVHITEQLFAGNLKALSA 121

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            D+ +    +PT  IS DE    + ++ L+V A  + S  +AR  +++ AI IN   + +
Sbjct: 122 RDLKVALNGVPTYEISADE---NLNIVELLVNAKISPSKRQAREDVQNGAIYINGERVQD 178

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               +   D        +  GKK + +  
Sbjct: 179 LDYTLSDTDKIDNEITVIRRGKKKNFVLT 207


>gi|93359589|gb|ABF13323.1| tyrosyl-tRNA synthetase [Streptococcus vestibularis]
          Length = 206

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 15/206 (7%)

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
             +T PL+T ++G K GK+   A+WL+   T+PY  +Q+W N+ D D V F K  T L +
Sbjct: 3   HVITVPLITDSTGKKFGKSEGNAVWLDATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSL 62

Query: 282 SEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT----------AAMECFDM 329
            EI+       Q +    A+K++A E+ T+VHG+E  E+A             A+   D+
Sbjct: 63  EEIEEIGKEFDQARHQRLAQKVLAREVVTLVHGKEAYEQAVHITEQLFAGNLKALSARDL 122

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            +    +PT  IS DE    + ++ L+V A  + S  +AR  +++ AI IN   + +   
Sbjct: 123 KVALNGVPTYEISADE---NLNIVELLVNAKISPSKRQAREDVQNGAIYINGERVQDLDY 179

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIICH 415
            +   D        +  GKK + +  
Sbjct: 180 TLSDTDKIDNEITVIRRGKKKNFVLT 205


>gi|218660716|ref|ZP_03516646.1| tyrosyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 227

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 79/171 (46%), Positives = 114/171 (66%), Gaps = 1/171 (0%)

Query: 246 WLNKEMTSP-YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
            L +    P Y+FWQYWRN +DADV  F K  TTLPM EI R++ + G E+NE KKI+AT
Sbjct: 54  GLAERRLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSAIGGSELNEVKKILAT 113

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG A S
Sbjct: 114 EVTAILHGRPAAEQAAETARKTFEEGGLSENLPSVEIPATELDGGIGLLSLMVRAGLAGS 173

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 174 NGEARRHVQGGAVRINDEAVSDERRLIGSDEITADGVIKLSLGKKKHILIR 224


>gi|121730108|ref|ZP_01682509.1| DnaK suppressor protein [Vibrio cholerae V52]
 gi|121628143|gb|EAX60675.1| DnaK suppressor protein [Vibrio cholerae V52]
          Length = 216

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 17/229 (7%)

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +         L  PLL       KM K+    I +++
Sbjct: 1   METDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE 60

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEIT 307
               P   +    +I D  + S+ + L+  P+ E+ +            + K ++A EI 
Sbjct: 61  A---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRDIKILLAKEII 117

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H + +A+ A    +  F      + M      + E   G+ +  L+ +AG   ST++
Sbjct: 118 ARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLKEAGLVASTSD 172

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 173 ALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 215


>gi|258578085|ref|XP_002543224.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903490|gb|EEP77891.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 458

 Score =  146 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 91/348 (26%), Positives = 151/348 (43%), Gaps = 60/348 (17%)

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN TW     + D++  +G    +  ML  ++V+SRL+    +S  EF Y I+QA+DF  
Sbjct: 33  NNNTWWNKQTFADVMTTLGQAVRLGPMLGRDNVKSRLEDGSGMSLAEFCYPIMQAWDFWY 92

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-----------------FALTSPLL 229
           L + +  ++Q+GGSDQ+GNI+ GID  + +                        +T+PLL
Sbjct: 93  LFQ-HGTQIQVGGSDQYGNILFGIDAIKGILKNNPNSEFAPKPGEDPDLVNPIGITTPLL 151

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT+SG K GK+   AIWL+K+MTS Y+ +QY+  + D+DV  + K  T +P SEI  + +
Sbjct: 152 TTSSGEKFGKSAGNAIWLDKDMTSCYDLYQYFVRLPDSDVERYLKLFTFIPTSEIKTLME 211

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATA----------------AMECFDMSI 331
              +      A+  +A E   ++HG  EA+KAA                  A    +   
Sbjct: 212 KHNENPSKRLAQHKLAVEFVEIIHGSNEAQKAARDHALIFVSKFADKTGDKAAPDSEDEP 271

Query: 332 HSQHMPTISISKDEVSRGMGLL------TLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
             Q +    +    V+    L+       ++  AG  +S  E  R + +N + + +   +
Sbjct: 272 RQQKLHMFDMPSPHVTLPRSLIYNQYFHKVLWSAGLVSSKAEGFRLIVNNGVHVGSQ--A 329

Query: 386 NEKLQ----------------IKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + K                  I  +       + L  GK    I  + 
Sbjct: 330 DSKQSMGDAISYVPVKTWPPNITEKFIIDDSLLILKVGKWKVKIIKVV 377


>gi|325972882|ref|YP_004249946.1| tyrosyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|325989375|ref|YP_004249074.1| Tyrosyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574460|emb|CBZ40110.1| Tyrosyl-tRNA synthetase [Mycoplasma suis]
 gi|323651484|gb|ADX97566.1| tyrosyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 358

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 168/367 (45%), Gaps = 15/367 (4%)

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-K 115
           +++L      G K + ++G  T+ IGD S+R E R+++ S  IQ N+E+I+  F     K
Sbjct: 1   MLVLNKASDYGIKTVIILGDFTTKIGDASWRTEDRKILESSVIQSNLEQIREQFKVLCPK 60

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                      N          I+++ ++   F ++ +LS +   S    + SL+  +  
Sbjct: 61  SEIVLNSTFYRNFS--------IEMMSDLMKNFKLSTLLSKD-FLSVRLSQDSLTLRDAF 111

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASG 234
           Y +LQ++DF  LA + +  +QMGG DQWGNI  GI+  ++          T PLLT ++G
Sbjct: 112 YPVLQSFDFYNLAVDKNVTIQMGGQDQWGNITTGIEFIKKKDNSIPTGGFTIPLLTDSNG 171

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            K GK+    ++LN ++TSPY  +QY+ N+ D  +   +  L    +   + M      +
Sbjct: 172 VKFGKSGKNTLFLNSKLTSPYKVYQYFWNLSDEKLKELSIFLFDSEIDSYESMTPECKSK 231

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS--ISKDEVSRGMGL 352
           I E          +    ++ +E       +  +     + +  +S  +   E S    +
Sbjct: 232 IIEKLFSGVYRDNSFRAIKKASELLFQKNSDIREKVFTEEDLKDLSSVLPFYETSGPTNI 291

Query: 353 LTLIVKAGFATSTNEARRHLK-SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            T++V  GF++S +E++R ++    +   + +  N K  +  +   S+    +  G+K +
Sbjct: 292 STILVNLGFSSSHSESKRLVELEKCVSCFSYVFKNHKEILDTK-LSSSSYFLIKKGEKEY 350

Query: 412 IICHLCG 418
            I H  G
Sbjct: 351 GIFHYSG 357


>gi|205374490|ref|ZP_03227286.1| tyrosyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 104

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 44/95 (46%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG ++Q ++   L  +     +  Y G D T  S+H GHL   + L   Q  
Sbjct: 2   DILKELEWRGILYQQTDEEGLSNVLHTEKIALYCGVDPTGDSMHIGHLLPFLTLRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
           GH PI L+GG T +IGDPS + +     +      
Sbjct: 62  GHTPIVLVGGATGLIGDPSGKKKKDSYKQLNRYNT 96


>gi|163802289|ref|ZP_02196183.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173818|gb|EDP58632.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 133

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 6/134 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPA--- 115

Query: 121 TDALMLNNETWLCS 134
               +  N  WL  
Sbjct: 116 -KTKIQFNSEWLSE 128


>gi|33322971|gb|AAQ07222.1|AF496530_1 tyrosyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
          lactis]
          Length = 90

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
          M  F  D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+
Sbjct: 1  MANF--DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMI 58

Query: 60 LFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
          L   Q  G+KP+ ++GGGT  IGDPS R   R
Sbjct: 59 LKRFQLAGYKPVIVIGGGTGSIGDPSGRSTER 90


>gi|218458672|ref|ZP_03498763.1| tyrosyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 163

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 74/160 (46%), Positives = 109/160 (68%)

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
           +FWQY RN +DADV  F +  TTLPM EI R++ + G E+NE KKI+ATE+T ++HGR  
Sbjct: 1   DFWQYGRNTEDADVPRFLQLFTTLPMDEIARLSAIGGSELNEVKKILATEVTAILHGRPA 60

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
           AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG A S  EARRH++  
Sbjct: 61  AEQAAETARKTFEEGGLSENLPSVEIPAIELDGGIGLLSLMVRAGLAGSNGEARRHVQGG 120

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 121 AVRINDEAVSDERRLIGSDEITADGVIKLSLGKKKHILIR 160


>gi|323250247|gb|EGA34137.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 195

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 8/192 (4%)

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMA 288
            A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+     
Sbjct: 1   KADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEE 60

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISIS 342
                +   A+ ++A ++T +VHG E    A       F  S+        + +    + 
Sbjct: 61  DKNSGKAPRAQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVP 120

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
             E+ +G  L+  +V A    S  +AR+ + SNA+ IN    S+ +     +D       
Sbjct: 121 MVEMEKGADLMQALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYT 180

Query: 403 KLSFGKKNHIIC 414
            L  GKKN+ + 
Sbjct: 181 LLRRGKKNYCLI 192


>gi|26350695|dbj|BAC38984.1| unnamed protein product [Mus musculus]
          Length = 222

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 16/181 (8%)

Query: 13  SERGFIHQISNP----RELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L  +        T Y G+D T  SLH GHL  L+ LF  
Sbjct: 37  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 96

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS-------SFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N   ++                
Sbjct: 97  QRAGHNVIALVGGSTALLGDPSGRTKGREALSAKCVRANAHALRRGLEALAANHARLFAD 156

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S      
Sbjct: 157 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLGGVLL 216

Query: 177 M 177
            
Sbjct: 217 P 217


>gi|283458441|ref|YP_003363066.1| tyrosyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134481|dbj|BAI65246.1| tyrosyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 211

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 17/215 (7%)

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           ++   + A+ +PL+T + GTK GK+   AIWLN +M SPY F+Q+W N  DADV+   K 
Sbjct: 1   MEGKSVHAIGTPLITNSDGTKFGKSEGNAIWLNPQMCSPYAFYQFWLNTADADVLDRLKV 60

Query: 276 LTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH- 332
            T L  +EI        +     EA+K +A  +T++VHG E  ++A  A+   F      
Sbjct: 61  FTFLTRAEIAEFAEKVEKEPFKREAQKTLAYLVTSLVHGTEATDQAVAASEALFGKGDFA 120

Query: 333 ----------SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                        +P+  +  D +     +++++ + GFA S +EARR LK     +N  
Sbjct: 121 ALDEATLESVVAELPSAKLPADRLD----MISVLTELGFAKSNSEARRILKEGGASVNGV 176

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +  E   I   D        +  GKKN     L 
Sbjct: 177 KVQGEDAAISKDDLLHGRFAMVRRGKKNQGAVELV 211


>gi|67522505|ref|XP_659313.1| hypothetical protein AN1709.2 [Aspergillus nidulans FGSC A4]
 gi|40745673|gb|EAA64829.1| hypothetical protein AN1709.2 [Aspergillus nidulans FGSC A4]
 gi|259487050|tpe|CBF85411.1| TPA: tyrosyl-tRNA synthetase, mitochondrial precursor
           (tyrosine--tRNA ligase) (tyrrs) (AFU_orthologue;
           AFUA_4G08320) [Aspergillus nidulans FGSC A4]
          Length = 427

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 84/365 (23%), Positives = 149/365 (40%), Gaps = 75/365 (20%)

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      +++LR++G++  +  ML  ++V++R++R   +SF EF Y ++QA+D+  
Sbjct: 36  NNNVWWNKTPLLEVLRDLGAYIRIGPMLGRDTVKNRMERGDGMSFAEFTYPLMQAWDWWM 95

Query: 187 LAKNYDCRLQMGGSDQWGNIICGID----------LGERLKT-----PKLFALTSPLLTT 231
           L K   C++Q+GGSDQ+GNI+ G+           L E          K    T+PLLTT
Sbjct: 96  LFK-NGCQVQVGGSDQYGNILFGVGAVKTISKNTVLQEDNNPLSDDLDKPIGFTTPLLTT 154

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--K 289
           +SG K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T LP+ EI ++   +
Sbjct: 155 SSGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDAVERYLKMFTFLPIPEISKIMEEQ 214

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATA--------------------------- 322
            Q      A+  +A E   ++HG++EA+  +                             
Sbjct: 215 NQDPSRRVAQHALAYEFVELIHGKDEADAVSMQHRQLFRPRTSTAEPTPPPRTASPGNPK 274

Query: 323 -----AMECFDMSIHSQHMPTISISKDEVSRGMGLL------TLIVKAGFATSTNEARRH 371
                 +     + H+      ++    V+    L+       ++  AG   S +E +R 
Sbjct: 275 SSLSGFVNPQSGNPHAPQTNFANMPSARVTLPKSLVYDKTFSKVLWSAGLVASKSEGQRI 334

Query: 372 LKSNAIKIN---NSI----------------ISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + +N   +                       I         +       + L  GK    
Sbjct: 335 INNNGAYVGSRPGVKKNEPGGGMPDDLTFTPIKTWNASKTQEFIIDGDLLILKLGKWKMK 394

Query: 413 ICHLC 417
           +  + 
Sbjct: 395 LVSIV 399


>gi|327350732|gb|EGE79589.1| hypothetical protein BDDG_02530 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 355

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 77/315 (24%), Positives = 136/315 (43%), Gaps = 56/315 (17%)

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           SV++RL+  + ++  EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L 
Sbjct: 4   SVKNRLQSGKGMALSEFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLM 63

Query: 218 TP------------------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
                               +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q
Sbjct: 64  KANDEYWRKHAPRDEDRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQ 123

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAE 317
           ++  + D +V  + K  T LP+  I  + +   ++     A+  +A+E   ++ G  EA 
Sbjct: 124 FFLRVTDENVEQYLKYFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAA 183

Query: 318 KAATAAMECFDMSIHSQH---------------------MPTISISKDEVSRGMGLLTLI 356
           +A       F     +                        P I++ +  V  G     ++
Sbjct: 184 QAEKDHRSIFGGKTPTSDELTPRPKRDINLSETSPFNAPSPHITLPRSLV-VGQFFHKVL 242

Query: 357 VKAGFATSTNEARRHLKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNI 402
             AG A S  EA R + +N   +    +++ I ++KL              +       +
Sbjct: 243 WSAGMAPSKAEAFRLVVNNGAAVASRSDSNAIMDDKLSYVPIKTWDKDMTEKFIIDDSLM 302

Query: 403 KLSFGKKNHIICHLC 417
            L  GK    I  + 
Sbjct: 303 ILKVGKWKVKIIKIV 317


>gi|327350731|gb|EGE79588.1| hypothetical protein BDDG_02529 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 241

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 14/167 (8%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+  +   L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---------- 113
              G + + L+GG T  +GDP+ R   R  M +   +EN+  +                 
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 114 --IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
              +       A ++NN +W     + ++++ +G    +  ML  ++
Sbjct: 196 HGYESEWIWRRA-IVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDT 241


>gi|302657965|ref|XP_003020693.1| hypothetical protein TRV_05219 [Trichophyton verrucosum HKI 0517]
 gi|291184550|gb|EFE40075.1| hypothetical protein TRV_05219 [Trichophyton verrucosum HKI 0517]
          Length = 475

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 88/355 (24%), Positives = 138/355 (38%), Gaps = 65/355 (18%)

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN TW      ID+L  +G    +  ML  E V++RL+    +SF EF Y I+QA+D+  
Sbjct: 33  NNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSFTEFCYPIMQAWDWWH 92

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--------------FALTSPLLTTA 232
           L +     +Q+GGSDQ GNI  GID  +++                   F LT PLLTT+
Sbjct: 93  LYQ-KGVMIQVGGSDQSGNIQLGIDTIKQVLKTSPIETKPGEDPELSMPFGLTVPLLTTS 151

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           +G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T LP S I  + +   
Sbjct: 152 TGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFTFLPTSRIPEIIEEHN 211

Query: 293 --KEINEAKKIIATEITTMVH---GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
                  A+  +A E   +VH     EEA KA  A  +    +       +I +    + 
Sbjct: 212 KAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIFQPQGSTSTKSDAKSIPLLPSGIP 271

Query: 348 RGMG-------------------------------LLTLIVKAGFATSTNEARRHLKSNA 376
             +                                   ++  AG  +S  E  R + +N 
Sbjct: 272 EYINAGVNKKAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGMVSSKQEGHRIIVNNG 331

Query: 377 IKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             +         + +             +  +       + L  GK    I  + 
Sbjct: 332 ASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIGKWRVKIIKVI 386


>gi|302502897|ref|XP_003013409.1| hypothetical protein ARB_00227 [Arthroderma benhamiae CBS 112371]
 gi|291176973|gb|EFE32769.1| hypothetical protein ARB_00227 [Arthroderma benhamiae CBS 112371]
          Length = 475

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 88/355 (24%), Positives = 138/355 (38%), Gaps = 65/355 (18%)

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN TW      ID+L  +G    +  ML  E V++RL+    +SF EF Y I+QA+D+  
Sbjct: 33  NNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSFTEFCYPIMQAWDWWH 92

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--------------FALTSPLLTTA 232
           L +     +Q+GGSDQ GNI  GID  +++                   F LT PLLTT+
Sbjct: 93  LYQ-KGVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDPELSMPFGLTVPLLTTS 151

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           +G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T LP S I  + +   
Sbjct: 152 TGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFTFLPTSRIPEIIEEHN 211

Query: 293 --KEINEAKKIIATEITTMVH---GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
                  A+  +A E   +VH     EEA KA  A  +    +       +I +    + 
Sbjct: 212 KAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIFQPQGSTSTKSDAKSIPLLPSGIP 271

Query: 348 RGMG-------------------------------LLTLIVKAGFATSTNEARRHLKSNA 376
             +                                   ++  AG  +S  E  R + +N 
Sbjct: 272 EFINAGVNKKAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGMVSSKQEGHRIIVNNG 331

Query: 377 IKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             +         + +             +  +       + L  GK    I  + 
Sbjct: 332 ASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIGKWRVKIIKVI 386


>gi|149642027|ref|XP_001514884.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 302

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 13/240 (5%)

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             Y CR+Q+GG DQ GNI  G +   ++    +F +T PL+T+ +G K+GK+   A+WLN
Sbjct: 59  SRYGCRVQLGGHDQLGNIQSGYEFVRKVTGKDVFGITVPLITSTTGAKLGKSAGNAVWLN 118

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEI 306
           ++ TSP+  +Q++    D  V  + K  T LP+ EID + K+     E    +K +A E+
Sbjct: 119 RDKTSPFELYQFFVRQQDDCVERYLKLFTFLPLPEIDHIMKMHAKEPEKRGPQKRLAAEV 178

Query: 307 TTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVSRGMGLLTLI 356
           T  VHG E  E A       +  S             +       S+  +  G  ++   
Sbjct: 179 TKFVHGPEGLESAKRCTQAIYHSSVDVLETMSDQELKELFREAPFSELVLDPGTSVIDTC 238

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
            KA          R +    + IN+  +++ +  + L Q     G   L  GKKN  I  
Sbjct: 239 RKANAIPEGPRGYRMITDGGVSINHHQMTDPESVLVLGQHILRNGLSLLKVGKKNIYIIK 298


>gi|76664689|emb|CAJ17785.1| tyrosyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 116

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F   L  R  I   +N  EL  L   G +  Y G+D TA SL  GHL Q+ ++  LQ+ 
Sbjct: 2   SFYEELKWRNLIKDCNNEEELKQLLGHGKIKFYCGFDPTADSLTVGHLVQITMISLLQQQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           GH P++L+GG T +IGDP    E R++   ++  +N + I+  F + +  
Sbjct: 62  GHLPVTLVGGATGLIGDPKE-TEERKLSSLEKSLKNAQSIEKQFKALLPN 110


>gi|218661276|ref|ZP_03517206.1| tyrosyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 111

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 57/79 (72%), Positives = 63/79 (79%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  FKSDFL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1  MSEFKSDFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61 FWLQKTGHKPISLMGGGTS 79
           WLQ TGH+PISLMGGGT 
Sbjct: 61 HWLQATGHRPISLMGGGTG 79


>gi|94502430|ref|ZP_01308871.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|94451013|gb|EAT13997.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
          Length = 256

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 87/253 (34%), Positives = 134/253 (52%), Gaps = 17/253 (6%)

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQAYDF+ L K  +C
Sbjct: 4   KKLFIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQAYDFIYLYKEKNC 63

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS-GAIWLNKEMT 252
            LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +   IW++  +T
Sbjct: 64  SLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGENIWIDPNLT 123

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMV 310
           SPY F+Q+W NI D     + K  T L   EI  +      +      +K +A+EIT  +
Sbjct: 124 SPYEFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKLIQKKLASEITIFI 183

Query: 311 HGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDEVSRGMGLLTLIV- 357
           HG++  EK    +   F+                 +++P   I     +  + ++ L+V 
Sbjct: 184 HGKKTFEKIKFISNILFNKKKIINEINKNYIIFIYKNIPHKKIYIYH-NFNIPIIDLLVN 242

Query: 358 KAGFATSTNEARR 370
           K+ F  S  EA R
Sbjct: 243 KSKFLKSKKEAIR 255


>gi|195155049|ref|XP_002018419.1| GL17697 [Drosophila persimilis]
 gi|194114215|gb|EDW36258.1| GL17697 [Drosophila persimilis]
          Length = 337

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 14/238 (5%)

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                +   DQ GN++ G +L  R++   ++F +T P++T   G K GK+   A+WL++ 
Sbjct: 98  GATGLIAAPDQTGNLMTGHELISRVERKREVFGMTLPIVTNEEGDKFGKSAGNAVWLDEN 157

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITT 308
            TSP+  +Q++  + D++     K  T +P+ EI+++ +      E  +A+ ++A ++T 
Sbjct: 158 KTSPFALYQFFLRMPDSEAEKLLKLFTFIPLPEIEQLMQEHEKEPEKRKAQTLLAEDVTL 217

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKD---------EVSRGMGLLTLIVK 358
           +VHG    ++A       +   +     +    I +              GM +L L +K
Sbjct: 218 LVHGENGLKQAERVTNALYKGKVDGLAELNYAEIKQTFQGAAVVDLLTEPGMSILQLAMK 277

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
           A    +  +A R + +    +N   + N    I         G   L  GK+N  I  
Sbjct: 278 AKCFPTETDAVRIINAGGFYVNQKRVQNIAEVITAGIHILRNGVSLLRVGKRNFYIVR 335



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 10/142 (7%)

Query: 6   SDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            + L  L++RGF   I   +   ++  L + G  + Y G+D TA SLH G+L  +M L  
Sbjct: 26  KNLL-ELTDRGFFQGIFPDTAAPKIKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLLH 84

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS---SFIKYGTG 119
            Q+ GH+PI+L+GG T +I  P   D++  +M   E+   +E+ + +F      +    G
Sbjct: 85  CQRAGHRPIALVGGATGLIAAP---DQTGNLMTGHELISRVERKREVFGMTLPIVTNEEG 141

Query: 120 KTDALMLNNETWLCSIKYIDLL 141
                   N  WL   K     
Sbjct: 142 DKFGKSAGNAVWLDENKTSPFA 163


>gi|163784933|ref|ZP_02179691.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879801|gb|EDP73547.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 128

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 3/119 (2%)

Query: 1   MPAFKSDFLSI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M  FK           ++G I  IS    ++ L     +    G+D TA  LH GH   L
Sbjct: 1   MKNFKDLPAEEQLKYIKKGTIEIISEEELVEKLKEGRPLIVKAGFDPTAPDLHLGHTVLL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
             L   Q+ GH    ++G  T++IGDPS RD++R  +  +++ EN +  K      +  
Sbjct: 61  QKLRTFQQLGHTVYFIIGDFTAMIGDPSGRDKTRPPLTKEQVFENAKTYKEQVFKVLDP 119


>gi|71033279|ref|XP_766281.1| tyrosyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353238|gb|EAN33998.1| tyrosyl-tRNA synthetase, putative [Theileria parva]
          Length = 512

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 93/389 (23%), Positives = 158/389 (40%), Gaps = 73/389 (18%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVV---------TAYIGYDLTASSLHAGHLTQ 56
           S  LS   ER  I Q ++  +LD L +             + Y G D T   +H G L Q
Sbjct: 84  SRILSQCMERSMISQSTDFVKLDQLLTSYQTQNFNNSMYNSIYYGIDCTNDFIHEGTLFQ 143

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE--------------------------- 89
           L+LL          + ++GGGT+++GDPS++                             
Sbjct: 144 LLLLRRFLSENFNVVLVLGGGTTLVGDPSYKLRRNRNDNFHFSNFILNKDNSEIDTTNEQ 203

Query: 90  ----------SRRMMRSQEIQEN---------IEKIKGIFSSFIKYGTGKTDALMLNNET 130
                     SR +        N                    +   +      ++NN  
Sbjct: 204 AIEEIATKILSRPIKIENTGLYNDVIVVPKVVRVSNLESDLDILSEMSKPYRVFIVNNRD 263

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--------LSFLEFNYMILQAY 182
               +  ++ L  +    +V RML+ + ++ R+  +          +   E  YM LQA 
Sbjct: 264 IYNRVNLMEYLETVARNMNVGRMLARDCIKIRMLDKDGTGYKKSINMDLAELMYMSLQAM 323

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------TPKLFALTSPLLTTASGT 235
           DFV LA+N++C++Q+GG+DQ GNI+ GI+L               ++ +T+PLL    G 
Sbjct: 324 DFVYLAQNFNCKIQLGGNDQMGNIVSGIELAGEHDTNGSSLGIGNVYGITTPLLKDKFGE 383

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K+ KT S         TSP+ FW ++R++DD++V ++ K  T + + +I           
Sbjct: 384 KISKTGSNCFLKITNKTSPHEFWSHFRSVDDSEVENYLKWFTDVSLDKIKESILEH---Y 440

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAM 324
           N  K ++A E+T +++G +  E      M
Sbjct: 441 NSGKVLLADELTRLLYGNQTVELIHKFCM 469


>gi|213422302|ref|ZP_03355368.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 164

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 79/163 (48%), Positives = 106/163 (65%), Gaps = 1/163 (0%)

Query: 111 SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSL 169
             F+ +  G+  A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ R  + +Q +
Sbjct: 1   CPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGI 60

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           SF EF+Y +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+
Sbjct: 61  SFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLI 120

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           T A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F
Sbjct: 121 TKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRF 163


>gi|311252791|ref|XP_003125269.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-tRNA synthetase,
           mitochondrial-like [Sus scrofa]
          Length = 383

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 93/418 (22%), Positives = 153/418 (36%), Gaps = 83/418 (19%)

Query: 13  SERGFIHQISNPRELDILCSQ---GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             RG I ++           +     +          SSL  GHL  L+ L   Q+ GH 
Sbjct: 30  KARGLITELFPETGTKRELPELFHHSLVV--------SSLQVGHLLSLLGLTRSQRAGHN 81

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I+L  G T+ +G                                               
Sbjct: 82  AIALXVGVTARLGA---------------------------------------------- 95

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
             L  ++ +  L  +        +LS  S+++RL   +     +    +LQ  DF     
Sbjct: 96  --LYQMQRLSFLEAVRGHIHTGTLLSPLSLQTRLPTGKPR--RQEFRQVLQLPDFY---- 147

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
               R+ +GGSDQ  +II G +   +L    +F ++ PL+TT   TK  K+   AIWLN+
Sbjct: 148 ----RVPLGGSDQLSHIISGYEFIHKLAGEGIFTVSIPLITT--RTKQXKSTLNAIWLNR 201

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEIT 307
             TS +     +    D  V S+ K +T LP  E+D +    ++  E    +K +ATE+T
Sbjct: 202 GKTSAFELCHSFVRQQDDLVESYLKLVTFLPFPELDHIMQLYVKDPEKKSCQKXLATEVT 261

Query: 308 TMVHGREEAEKAATAAMECFDMSIH---------SQHMPTISISKDEVSRGMGLLTLIVK 358
            +VHG+E  + A       +  SI           + +   S S+  +  G  +L    K
Sbjct: 262 LLVHGQEGLDSAERYREALYHGSIDALKVMADQEEEFLKEASFSELVLDPGTSVLDTCYK 321

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKNHIICH 415
           A            +    + IN+  ++N +  + L       G + L  GK+N  I  
Sbjct: 322 ANATPHGPHGYWMITEGEVNINHRQVTNPESVLVLGQCILKNGFLLLKIGKRNFYIIK 379


>gi|94502284|ref|ZP_01308765.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
 gi|94451163|gb|EAT14107.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
          Length = 90

 Score =  124 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  F  + +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L
Sbjct: 1  MNNFNLNLIQELLWRGLIHDTTYSEQIK----NEIITLYTGFDPTYKSLHIGNLVAIIML 56

Query: 61 FWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
             QK+G+  IS++GGGT +IGDPS ++  R
Sbjct: 57 IHFQKSGNNIISVIGGGTGMIGDPSGKNCER 87


>gi|53729288|ref|ZP_00348367.1| COG0162: Tyrosyl-tRNA synthetase [Pasteuria nishizawae str. North
           American]
          Length = 238

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 16/247 (6%)

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N  WL  +   D+L+ +    +V RML  E    R + ++ +   EF Y +LQ 
Sbjct: 4   KTRVVYNSRWLEKLNLEDILQLMSQM-TVARMLEREDFSQRYREKRPIGMHEFLYPLLQG 62

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKT 240
           YD V L    +  +++GG+DQ  N++ G  L +     K   +T PLL       KM K+
Sbjct: 63  YDSVVL----ESDVELGGTDQTFNLLMGRQLQKFYGKGKQVVMTLPLLVGLDGQKKMSKS 118

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINE 297
           +   + + ++   P N +     + D  ++ + + +T     E++ + +      +   E
Sbjct: 119 MGNQVGITED---PVNMYGKIMALSDESMLDYYQLITDYTSQEVEELRRELGEGSQHPME 175

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AK  +A  +    H    A+ A     +        +  P  S+   E      +++++V
Sbjct: 176 AKHRLAHFVIGRYHSGLAAQMAGEHFRKTVQQKQLPEDFPECSLPPGEW----TVISVMV 231

Query: 358 KAGFATS 364
           + G   S
Sbjct: 232 QVGLVGS 238


>gi|330861037|emb|CBX71308.1| hypothetical protein YEW_BZ08530 [Yersinia enterocolitica W22703]
          Length = 80

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M +  S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L
Sbjct: 1  MTS--SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCL 58

Query: 61 FWLQKTGHKP 70
             Q  GH+P
Sbjct: 59 KRFQLAGHRP 68


>gi|291333575|gb|ADD93269.1| tyrosyl tRNA synthetase [uncultured archaeon MedDCM-OCT-S08-C92]
          Length = 347

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 85/235 (36%), Gaps = 25/235 (10%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M   KS     L  RG + +     ELD L  ++    AY+G++ +   LHAG L  ++ 
Sbjct: 8   MSDRKS-----LVMRG-VSECVTEDELDNLLTNKETPRAYVGFEPSGL-LHAGSLVPMLK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
              L   G +   L+      I D                 +N+                
Sbjct: 61  CKELVDAGFEVTILLADWHGYINDKLGGS-----------WDNLNAGVEYQRQMFSVFCP 109

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                       +    Y +++  I    S+ RM    S+  R +++      +F Y  +
Sbjct: 110 GVKFKT--ASEIVIEDGYWEMVLRISKASSLKRMRRALSIMGRDEKDGDKDMSKFFYPAM 167

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           QA D   L    +  L +GG DQ    +   D  ++LK  K  AL +PLL + SG
Sbjct: 168 QAADIYAL----EADLALGGMDQRHAHMLARDAADKLKLRKPVALHTPLLGSLSG 218


>gi|320583069|gb|EFW97285.1| de-n-glycosylation protein, putative [Pichia angusta DL-1]
          Length = 475

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 18/273 (6%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L      GH   +L+GG T                + ++   N  +     +  +   
Sbjct: 1   MVLLHFNLRGHSITALVGGATG-------------TAQFEQFFRNGRRYAASRNHVL--D 45

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
               +  + NN  W   + +++ L   G F  VN+MLS +S+RSRL  EQ + F EF Y 
Sbjct: 46  RPHGEVAVRNNYDWWKDMGFLEFLARYGRFIRVNQMLSRDSIRSRLDSEQGIGFNEFTYQ 105

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---PKLFALTSPLLTTASG 234
           +LQAYDF  L KN+   +Q+GG+DQ+GNI+ G+DL +R+      K F +T PLLTTA+G
Sbjct: 106 LLQAYDFYYLNKNHGIDVQVGGNDQYGNIVAGLDLIDRMHPGEKKKAFGVTVPLLTTANG 165

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            K GK+   A++++K +T              A +    +      +           + 
Sbjct: 166 VKFGKSAGNAVFIDKNLTPRLMDKYADEEAQSAALDVVLQSGVYERLENHADEPDYTDRL 225

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +    +    +  T ++        A       
Sbjct: 226 VRALLEWYKNDFFTWINRPPCPCGNADQTKIQP 258


>gi|325473315|gb|EGC76510.1| hypothetical protein HMPREF9353_02305 [Treponema denticola F0402]
          Length = 142

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 3/139 (2%)

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            T L + EI  +      +IN+AK+ +A E+T ++HG+EEAEKA   A   F    +   
Sbjct: 4   FTFLSIEEIKSVC---AGDINKAKERLAFEVTALIHGKEEAEKALEGARAAFSGGGNKDA 60

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MPT ++S  +++ G+G++ L  +AG A++ ++ARR ++     IN   IS+ K  I  + 
Sbjct: 61  MPTANLSLSKLNDGIGIIDLFAEAGLASTKSDARRLVEQGGAFINEEKISDIKAIIGKEK 120

Query: 396 FDSTGNIKLSFGKKNHIIC 414
            D    + L  GKK  +  
Sbjct: 121 LDKDNEMILRAGKKRFMRI 139


>gi|325528769|gb|EGD05830.1| tyrosyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 113

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 14  ERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    +        L     +   +   +G D TA  +H GH   L  +  LQ  GH 
Sbjct: 25  KRGVDELLIEEEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHT 84

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            I L+G  TS+IGDPS R+ +R  +  ++
Sbjct: 85  VIFLIGDFTSLIGDPSGRNATRPPLTREQ 113


>gi|11498382|ref|NP_069610.1| tyrosyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122912|sp|O29482|SYY_ARCFU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83754904|pdb|2CYB|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With L-Tyrosine From Archaeoglobus Fulgidus
 gi|83754905|pdb|2CYB|B Chain B, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With L-Tyrosine From Archaeoglobus Fulgidus
 gi|2649832|gb|AAB90462.1| tyrosyl-tRNA synthetase (tyrS) [Archaeoglobus fulgidus DSM 4304]
          Length = 323

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 87/253 (34%), Gaps = 21/253 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     ++      ++ ++    AY+GY+ +   +H GH+  +  L  LQ+ G + I
Sbjct: 9   LITRNAEEVVTEEELRQLIETKEKPRAYVGYEPSGE-IHLGHMMTVQKLMDLQEAGFEII 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + +                  +E  E        FI  G  ++ A  +    +
Sbjct: 68  VLLADIHAYLN------------EKGTFEEIAEVADYNKKVFIALGLDESRAKFVLGSEY 115

Query: 132 LCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S  Y+  + ++    ++NR     + V  R +        +  Y ++QA D   L   
Sbjct: 116 QLSRDYVLDVLKMARITTLNRARRSMDEVSRRKEDPM---VSQMIYPLMQALDIAHL--- 169

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               L +GG DQ    +   +   RL       L +P+L    G KM  +    I +   
Sbjct: 170 -GVDLAVGGIDQRKIHMLARENLPRLGYSSPVCLHTPILVGLDGQKMSSSKGNYISVRDP 228

Query: 251 MTSPYNFWQYWRN 263
                   +    
Sbjct: 229 PEEVERKIRKAYC 241


>gi|327401473|ref|YP_004342312.1| Tyrosyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327316981|gb|AEA47597.1| Tyrosyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 329

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 88/253 (34%), Gaps = 21/253 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  ++      +L +     AY+GY+ +   +H GHL  +  L  LQ  G   +
Sbjct: 9   LVTRNAVEIVTEDELRTLLETNEKPRAYVGYEPSGE-IHLGHLMTVNKLIDLQNAGFDVV 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + +               +EI+   E  K    +FI  G  +     +   ++
Sbjct: 68  VLLADVHAYLN---------EKGDFEEIERIAEYNK---QAFIALGLEENKTEFVLGSSY 115

Query: 132 LCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S  Y+  + ++    ++NR     + V  R +        +  Y ++QA D   L   
Sbjct: 116 QLSRDYVLDVLKMARITTLNRARRSMDEVSRRKEDPM---VSQMVYPLMQALDIAHLK-- 170

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               L +GG DQ    +   +   RL       L +P+L    G KM  +    I +   
Sbjct: 171 --IDLAVGGMDQRKIHMLARENLPRLGYLSPVCLHTPILLGLDGQKMSSSKGNYISVRDS 228

Query: 251 MTSPYNFWQYWRN 263
                   +    
Sbjct: 229 EEEVEKKLRKAYC 241


>gi|88603704|ref|YP_503882.1| tyrosyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|108861904|sp|Q2FNA1|SYY_METHJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|88189166|gb|ABD42163.1| tyrosyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 313

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 105/306 (34%), Gaps = 24/306 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  +++   L  L  + V   Y GY+ +   +H GHL  +  L  L+  G +   L+
Sbjct: 9   RNTVEVVTDEE-LRSLLDRPVRKVYAGYEPSGE-IHLGHLVTINKLIDLRDAGFEVTVLL 66

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + +          R    +E+++  E  +  F      G G TD   +   ++  S
Sbjct: 67  ADLHAFLN---------RKGTMEEVKKLAEYNRRCFE-----GLGLTDIKYVLGSSFQLS 112

Query: 135 IKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +Y  L+ E+    ++NR     + V  ++      +  +  Y I+Q  D   L      
Sbjct: 113 PEYQILVHELSQAITLNRAKRSMDEVGRQMDNP---TVSQMVYPIMQMADIAML----GV 165

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
              +GG DQ    +   +       P    +  P+L    G KM  +    I + +    
Sbjct: 166 DAALGGIDQRKIHMLAREYLPSKNYPSPVCIHVPILQGLDGKKMSSSQGNYISVAESEED 225

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
                +      + +     + L       +D +   + ++    +   + E     + +
Sbjct: 226 IRKKMKKAFCPPEVEDNPVLQVLQHHIFPRLDTVTIERPEKFGGNRTFGSYEEMEQAYAK 285

Query: 314 EEAEKA 319
            E   A
Sbjct: 286 GEIHPA 291


>gi|219853337|ref|YP_002467769.1| tyrosyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219547596|gb|ACL18046.1| tyrosyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 316

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 105/309 (33%), Gaps = 24/309 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  +++   L  L  +     Y GY+ +   +H GHL  +  L  L+K G + +
Sbjct: 6   LVTRNTVEVVTDEE-LSALLKKPGRKVYAGYEPSGE-VHLGHLVTVNKLLDLKKVGFEIV 63

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + +          R    +E++   E  +  F      G G  D   +     
Sbjct: 64  VLLADLHAFLN---------RKGTMEEVRTLAEYNRKCFE-----GLGLVDVTYVLGSDL 109

Query: 132 LCSIKYIDLLREIGSFFSVNR-MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y  L+ +I    ++NR   S + V  +++     +  +  Y I+Q  D   L   
Sbjct: 110 QLSPEYELLMLKISQEVTLNRATRSMDEVGRQMEHP---TVSQMVYPIMQITDIATL--- 163

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                 +GG DQ    +   +       P    L +P+L    G KM  +    I + ++
Sbjct: 164 -GVDAAVGGIDQRKIHMLAREYLPGHGYPTPVCLHTPILNGLDGKKMSSSQKNYISVAED 222

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S            + +     + L        + +   + ++        + E  +  
Sbjct: 223 EESIRKKMNKAYCPKEIEENPVLQMLQYHLFPRFNEITLHRPEKFGGDLTFTSYEALSEA 282

Query: 311 HGREEAEKA 319
           +G      A
Sbjct: 283 YGSGAIHPA 291


>gi|124027763|ref|YP_001013083.1| tyrosyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978457|gb|ABM80738.1| Tyrosyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 362

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 57/375 (15%), Positives = 115/375 (30%), Gaps = 41/375 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  ++     + L S   +  YIG++ +    H G L     +  + + G    
Sbjct: 9   LITRNTVEVVTVEELREKLESGEKLKGYIGFEPSGL-FHIGWLVWAFKVKDMVEAGIDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D    +               +  + +       G  ++   +++ E  
Sbjct: 68  LLAATWHAWINDKFGGNMELIR----------KAARHVVDVLEAIGVERSKVKVVDAEDL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +   +Y  +L ++    ++ RM    ++  R   E  L F +  Y  +Q  D   L    
Sbjct: 118 VSDKEYWAILLKVAKSNTLARMKRALTIMGRRAEEAELDFSKLIYPAMQVTDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           D  + +GG DQ    +   D  E+L   K+ A+ +PL+T+               L +  
Sbjct: 174 DLDIALGGIDQRKAHMLARDTAEKLGRKKVIAVHTPLITSL------------QGLGRMN 221

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV- 310
               +   +      +            P  EI+R            +     EI   + 
Sbjct: 222 PDQVDEETHAVEFKMSKSKPETALFVYDPPEEIERKILRAYCPARIVRYNPIIEINKYLL 281

Query: 311 -----------HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
                         +        + E  +       +  + + K      + LL  + + 
Sbjct: 282 FSRPGFKLVVERPEKYGGTVVIESYEELEKLYVEGKLHPLDLKKATAKALIELLEPVRRY 341

Query: 360 GFATSTNEARRHLKS 374
               S  EAR  L+ 
Sbjct: 342 --FESNREARELLEE 354


>gi|109096144|ref|XP_001085644.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Macaca
           mulatta]
          Length = 220

 Score =  116 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 13/216 (6%)

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             RL    +F +T PL+T+ +G K+GK+   A+WLN++ TSP+  +Q++    D  V  +
Sbjct: 1   MHRLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERY 60

Query: 273 AKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  T LP+ EID + +L     E   A+K +A E+T +VHGRE  + A       +  S
Sbjct: 61  LKLFTFLPLPEIDHIMQLHVKEPERRGAQKRLAAEVTKLVHGREGLDSAKRCTQALYHSS 120

Query: 331 IHSQHM----------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           I +  +               S+  +  G  +L    KA          R +    + IN
Sbjct: 121 IDALEVMSDQELKELFKEAPFSELFLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSIN 180

Query: 381 NSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
           +  ++N +  + + Q     G   L  GK+N  I  
Sbjct: 181 HRQVTNPESVLVVGQHILKNGLSLLKIGKRNFYIIK 216


>gi|284161190|ref|YP_003399813.1| tyrosyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011187|gb|ADB57140.1| tyrosyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 322

 Score =  116 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 96/254 (37%), Gaps = 21/254 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R  +  ++    L++L ++    AY+GY+ +   +H GH+  +  L  LQ+ G + 
Sbjct: 8   QLIKRNAVEIVTEEELLELLQTKEKPRAYVGYEPSGE-IHLGHMMTVQKLIDLQQAGFEI 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + +    DE R++    +             +FI  G  ++ A  +    
Sbjct: 67  VVLLADVHAYLNEKGDFDEIRKIADFNK------------KAFIALGLDESKAKFVLGSE 114

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +     Y+  + ++    +VNR     + V  R +        +  Y ++QA D   L  
Sbjct: 115 YQLERDYVLDVLKMARITTVNRARRSMDEVSRRKEDPM---VSQMIYPLMQALDIAHL-- 169

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                L +GG+DQ    +   +   RL       L +P+L    G KM  +    I +  
Sbjct: 170 --GVDLAVGGTDQRKIHMLARENLPRLGYKAPICLHTPILLGLDGQKMSSSKGNYISVRD 227

Query: 250 EMTSPYNFWQYWRN 263
                    +    
Sbjct: 228 SAEEVEKKIRKAFC 241


>gi|291458843|ref|ZP_06598233.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
          F0262]
 gi|291418097|gb|EFE91816.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
          F0262]
          Length = 88

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 43/70 (61%)

Query: 8  FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
              L ERG I Q+++  ++  L + G    YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 17 VFEELRERGLIAQLTDEEKIRELINAGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEAG 76

Query: 68 HKPISLMGGG 77
          ++PI+L+GGG
Sbjct: 77 NRPIALVGGG 86


>gi|76664846|emb|CAJ17860.1| tyrosyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 200

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 8/197 (4%)

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +PLL  A+GTK GK+  G +WLN E TSPY  +QY+ ++ DA+++++ K LT +   EI 
Sbjct: 1   TPLLLNANGTKFGKSEQGVLWLNPEKTSPYEIYQYFLSVGDAEIINYLKTLTLISKKEIL 60

Query: 286 RMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
            + K   Q  +    +  +A +I  +++  +  +         F             + +
Sbjct: 61  ELEKQTLQNPQKRLGQMALAKKIINLIYSPKVLQDCLKTNELLFSNKKKVLMQEDFLLLE 120

Query: 344 DEV------SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             +         + L+  +VK    TS +EAR  +K  +IKI N  I N    I  +   
Sbjct: 121 KTLFCYSTQLDSIFLVDALVKTKLTTSKSEAREFIKKGSIKIFNQQIKNPDYLITKETTL 180

Query: 398 STGNIKLSFGKKNHIIC 414
               I L   KKN+ + 
Sbjct: 181 FNKYILLKKSKKNNALI 197


>gi|126180436|ref|YP_001048401.1| tyrosyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|158513244|sp|A3CYG9|SYY_METMJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|125863230|gb|ABN58419.1| tyrosyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 315

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 96/291 (32%), Gaps = 27/291 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R  +  +++   L  L  + V   Y GY+ +   +H GH+  +  L  LQ+ G + 
Sbjct: 5   ELVTRNTVEVVTDEE-LRALIDRPVRRVYTGYEPSGE-IHLGHMVTVNKLMDLQQAGFEV 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +          R    +EI+E  E  +  F      G G   A  +    
Sbjct: 63  TVLIADLHAFLN---------RKGTMEEIRETAEYNRRCFE-----GLGLRGANYVLGSD 108

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
              + +Y   + E+    ++NR     + V  ++      +  +  Y I+Q  D   L  
Sbjct: 109 VQLTPEYELAVLELSQAITLNRAKRSMDEVGRQMDNP---TVSQMVYPIMQMVDIATL-- 163

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                  +GG DQ    +   +    +  P    + +P++    G KM  +    I +  
Sbjct: 164 --GVDAAVGGIDQRKIHMLAREHLPSIGYPAPVCIHTPIINGLDGKKMSSSAGNVISVAD 221

Query: 250 EMTSPYNFWQYWRN---IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
                    +       +++  V+   +         +      +     E
Sbjct: 222 SEEDIKKKMKKAFCPPEVENNPVLEILRYHVFPRAGAVAIRRPEKFGGDRE 272


>gi|20089699|ref|NP_615774.1| tyrosyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|74551678|sp|Q8TSI1|SYY_METAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19914628|gb|AAM04254.1| tyrosyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 317

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 108/327 (33%), Gaps = 45/327 (13%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++      +L ++    AY+GY+ +   +H GH+  +  L  LQK G K 
Sbjct: 5   ELIRRNVQEIVTEEELEGLLKNKEAPRAYVGYEPSGK-IHMGHVLTVNKLIDLQKAGFKI 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +          +    +E+++  +  +  F   I  G  +     +    
Sbjct: 64  TVLLADVHAYLN---------KKGTLEEVRKIADYNRRCF---IALGLDEEQTDFVYGSD 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +    +Y+  + ++    ++NR     + V   +      +  +  Y ++QA D      
Sbjct: 112 FQLGAEYMLNVLKLSRAVTLNRAKRSMDEVGRAMDDP---TVSQMVYPLMQAIDI----A 164

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +  + +GG DQ    +   +  + L       + +P+L    GTKM  +    I ++ 
Sbjct: 165 LLEVDVAVGGIDQRKIHMLARENLKSLGFETPICIHTPILLGLDGTKMASSKDNFISIDD 224

Query: 250 EMTSPYNFWQYWRN------------------------IDDADVVSFAKRLTTLPMSEID 285
                Y  ++                            +       F   +T    +E++
Sbjct: 225 TGEDIYRKFKKAFCKIGDVEENPILALFRYHIFPRYETVVIERPEKFGGDITYHSYAEME 284

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHG 312
                +     + K   A  I  ++  
Sbjct: 285 SNFIEEKVHPMDLKNAAAKYINEILDP 311


>gi|15668565|ref|NP_247363.1| tyrosyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501077|sp|Q57834|SYY_METJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|31615439|pdb|1J1U|A Chain A, Crystal Structure Of Archaeal Tyrosyl-Trna Synthetase
           Complexed With Trna(Tyr) And L-Tyrosine
 gi|67464162|pdb|1U7D|A Chain A, Crystal Structure Of Apo M. Jannashii Tyrosyl-Trna
           Synthetase
 gi|67464163|pdb|1U7D|B Chain B, Crystal Structure Of Apo M. Jannashii Tyrosyl-Trna
           Synthetase
 gi|1591094|gb|AAB98375.1| tyrosyl-tRNA synthetase (trS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 306

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 102/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +AYIG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +      DE R++                  +   +      A  +    
Sbjct: 63  IILLADLHAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSE 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   +  +    ++ R     S+    + +++    E  Y I+Q  D   L   
Sbjct: 108 FQLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNDIHYL--- 162

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 163 -GVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|73669252|ref|YP_305267.1| tyrosyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|108860970|sp|Q46BQ5|SYY_METBF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72396414|gb|AAZ70687.1| tyrosyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 317

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 109/327 (33%), Gaps = 45/327 (13%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R     ++     ++L  +    AY+GY+ +   +H GH+  +  L  LQK G + 
Sbjct: 5   DLIKRNVQEIVTEGELEELLNKKKAPRAYVGYEPSGK-IHMGHVLTVNKLIDLQKAGFEI 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +          R    +E+++  +  K  F   I  G  K     +    
Sbjct: 64  TVLLADVHAYLN---------RKGTLEEVRKIADYNKRCF---IALGLDKEKTNFVYGSD 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +    +Y+  + ++    ++NR     + V   +      +  +  Y ++QA D   L  
Sbjct: 112 YQLGAEYMLNVLKLSRSVTLNRARRSMDEVGRAMDDP---TVSQMVYPLMQAIDIAML-- 166

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                + +GG DQ    +   +  + L       + +P+L    GTKM  +    I ++ 
Sbjct: 167 --GVDIAVGGIDQRKIHMLARENLKNLGFETPICIHTPILLGLDGTKMASSKENFISVDD 224

Query: 250 EMTSP------------------------YNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
                                        Y+ +  +  I       F   +T     E++
Sbjct: 225 TEEEIYRKLKKAYCKIGDTEENPILALFRYHIFPRYETIVIERPEKFGGNITYTSYEEME 284

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHG 312
                +     + K   A  I  ++  
Sbjct: 285 NAFVAESVHPMDLKNSAAKYINEILDP 311


>gi|124486546|ref|YP_001031162.1| tyrosyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|158512821|sp|A2SU89|SYY_METLZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|124364087|gb|ABN07895.1| tyrosyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 317

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 90/310 (29%), Gaps = 27/310 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++   EL  L ++     Y GY+ +   +H GHL  +  L  ++  G   
Sbjct: 5   ELVTRNTAEIVT-EDELRALLNKPTKRVYTGYEPSGE-IHLGHLVTINKLMDMKAAGFDV 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +         R+     +I+E  +  K    +      G   A  +    
Sbjct: 63  VVLIANLHAYLN--------RKGTFE-QIKELADYNKACIEAV-----GLKGAEFVLGTD 108

Query: 131 WLCSIKYIDLLREIGSFFSVNR-MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
              + KY   +  +    ++NR   S + V   +         +  Y ++Q  D      
Sbjct: 109 VQLTPKYQTEVLTLCQQITLNRATRSMDEVGRAMDNPM---VSQMVYPVMQVVDI----P 161

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +    +GG DQ    +   +    L       + +P++    G KM  +    + +  
Sbjct: 162 TLNVDAAVGGIDQRKIHMLAREHLPTLGYKPPVCIHTPIVNGLDGEKMSSSKGNVVSVAD 221

Query: 250 EMTSPYNFWQYWRN---IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
                    +        +   ++   +      M  I      +     E       E 
Sbjct: 222 SPEEIKKKMKKAFCPPETEGNPILQIFRYNVFPRMDTIAIRRPEKFGGDLEFHSYAELEA 281

Query: 307 TTMVHGREEA 316
                     
Sbjct: 282 AYAGGKIHPM 291


>gi|324515432|gb|ADY46199.1| Tyrosyl-tRNA synthetase [Ascaris suum]
          Length = 320

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 24/315 (7%)

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGK------TDALMLNNETWLCSIKYIDLLREIGSF 147
           M  + +++N  +I+   S   +               +++N  W   +  +  +R I   
Sbjct: 1   MAEEVVKKNAGEIRMQMSKMAQNFYEMHSNEKTEPMEIIDNTEWHSRMTSLQFVR-ICRL 59

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           F V  ML   +++SR++    L   EF Y I+Q+YD+ +L++ YDC  Q+GGSDQ G++ 
Sbjct: 60  FRVGDMLRLGAIKSRMRENHGLPCSEFLYQIMQSYDWYQLSQKYDCYFQIGGSDQLGHLD 119

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL---SGAIWLNKEMTSPYNFWQYWRNI 264
            G D            +  PL+T ASG K+GK++      IWL++  TSPY F+Q++R  
Sbjct: 120 AGYDYIRLRTGRFSAGICLPLITDASGRKLGKSVASPKENIWLSEAKTSPYAFYQFFRQQ 179

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATA 322
            D ++V   +  +  P+SE++ +       + +  A++ +A E+T +VHGR+  + A   
Sbjct: 180 PDKEIVPLIRYFSLRPLSEVEEILSEHNANLGKWVAQEQLAQEMTRLVHGRKGLDLAQQC 239

Query: 323 AMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLI---VKA--GFAT-STNEARR---HL 372
           +   F  S+   + +P  ++  +E+     +  L+   VK     A  + ++  R    +
Sbjct: 240 SRALFKGSLSDIEKIPLSTL--EELFGEASIRRLLKSEVKTVGDLADRTRSDKMRGSILM 297

Query: 373 KSNAIKINNSIISNE 387
           K  A+ +N     + 
Sbjct: 298 KKGALSLNGQKFIDP 312


>gi|25145805|ref|NP_741383.1| tYrosinyl tRNA Synthetase family member (yrs-1) [Caenorhabditis
           elegans]
 gi|22532881|gb|AAM98001.1| C. elegans YARS-1 protein, isoform b, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 327

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 77/332 (23%), Positives = 142/332 (42%), Gaps = 19/332 (5%)

Query: 100 QENIEKIKGIFSSFIKYGTGK-TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             N  K+        +   G     +++NN  WL  I   D LRE      V +ML   +
Sbjct: 1   MHNSRKVTDQICKIFENAPGSSEKPIIVNNNDWLGKISLRDFLRE-CKNMQVGKMLRMNT 59

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +++RL  E  LS+ EF+Y  +QA+D+  L++ Y CR Q+GG DQ G++  G    +++  
Sbjct: 60  IKNRL--EVGLSYTEFSYQTMQAFDWYTLSEKYGCRFQLGGYDQLGHLDFGAHYIKKMMN 117

Query: 219 PK-LFALTSPLLTTASGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
                 +  P+LT ++G K+GK+   GA+WL+   TSP++F+Q++  + D          
Sbjct: 118 QAFAAGVCFPILTDSTGAKLGKSEGGGALWLDATKTSPFHFYQFFAQLHDDKAEELLLLF 177

Query: 277 TTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMS---- 330
           +   +  I  + K     + +  A++ +A EIT +VHG+E  E A       F       
Sbjct: 178 SLQDIEHIRDVLKNHRSNLGQWIAQRELAAEITRIVHGKEGLEVAMRCTKAMFGAKKADL 237

Query: 331 ---IHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                S+ +     + D     +  +  L   +   +        ++  A  +N     +
Sbjct: 238 SGLSRSEVLQLFRTTIDLKKENVATMGQLADASRLGSGKGHL--LMQQGAFSVNGEKKRS 295

Query: 387 EKLQIKLQDFDSTGNIKLSF-GKKNHIICHLC 417
               I     ++  ++ L   GK+ + +    
Sbjct: 296 PSESIADVFLENASDLTLVCWGKRGYQLVRWV 327


>gi|154151994|ref|YP_001405612.1| tyrosyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000546|gb|ABS56969.1| tyrosyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 313

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 84/250 (33%), Gaps = 24/250 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  ++   EL  L ++     Y GY+ +   +H GHL  +  L  LQ  G +   L+
Sbjct: 9   RNTVEIVT-EDELRALLARPTKKVYAGYEPSGE-IHLGHLVTVNKLVDLQAAGFEVTVLL 66

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + +         R+    +  +   E  +  F      G G  +   +       +
Sbjct: 67  ADLHAFLN--------RKGTLEKVGEL-AEYNRRCFE-----GLGLKNVRYILGSDLQLN 112

Query: 135 IKYIDLLREIGSFFSVNR-MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +Y  L+ ++    ++ R   S + V  ++      +  +  Y I+Q  D   L      
Sbjct: 113 REYELLVHQLSQQITLARATRSMDEVGRQMDHP---TVSQMVYPIMQMADIAML----GV 165

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
              +GG DQ    +   +     K P    + +P+L    G KM  +    I +      
Sbjct: 166 DAAVGGIDQRKIHMLAREHLPNFKYPSPVCIHTPILNGLDGKKMSSSQGNYISVADSEDE 225

Query: 254 PYNFWQYWRN 263
                Q    
Sbjct: 226 IKKKCQKAFC 235


>gi|304314111|ref|YP_003849258.1| tyrosyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587570|gb|ADL57945.1| tyrosyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 319

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 87/264 (32%), Gaps = 22/264 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             D L  +  R  +  I+    L+++     V  Y GY+ +   +H GH   +  L  LQ
Sbjct: 1   MDDTLDTI-TRDVLEVITPDELLEVMKKDEPV-VYTGYEPSGK-VHLGHAITIRKLRELQ 57

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G +   L+    + +     +    R+    +              F+  G       
Sbjct: 58  DAGFRVKILLADYHAYLN---GKGSMERIREMADYNR---------KCFLALGLSPDRTE 105

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +   ++    +Y DL+  +    ++  + +  S+    +  +     E  Y ++Q  D 
Sbjct: 106 FVLGSSFQTQPEYTDLVYRMALITTL--LRARRSMAQITRESEDHKVAEVIYPLMQVIDM 163

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSG 243
           V L    D  + +GG +Q    +   +   RL       + +PLL  T    KM  +   
Sbjct: 164 VYL----DVDVALGGMEQRKIHMLARENLPRLGFDAPVCIHTPLLHGTDGSEKMSSSKGN 219

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDA 267
            I ++          +        
Sbjct: 220 FIAVDDSPAEIREKVKGSYCPMGE 243


>gi|21228065|ref|NP_633987.1| tyrosyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74550296|sp|Q8PVK0|SYY_METMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|20906500|gb|AAM31659.1| Tyrosyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 317

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 93/256 (36%), Gaps = 21/256 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R     ++      +L  +    AY+GY+ +   +H GH+  +  L  LQK G K 
Sbjct: 5   ELIKRNVQEIVTEEELEGLLNKKETPRAYVGYEPSGK-IHMGHVLTVNKLIDLQKAGFKI 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +          R    +E+++  +  +  F   I  G  +     +    
Sbjct: 64  TVLLADVHAYLN---------RKGTLEEVRKIADYNRRCF---IALGLDEEQTDFVYGSD 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +    +Y+  + ++    ++NR     + V   +      +  +  Y ++QA D      
Sbjct: 112 FQLGAEYMLNVLKLSRAVTLNRAKRSMDEVGRAMDDP---TVSQMVYPLMQAIDI----A 164

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +  + +GG DQ    +   +  + L       + +P+L    GTKM  +    I ++ 
Sbjct: 165 LLEVDVAVGGIDQRKIHMLARENLKSLGFETPICIHTPILLGLDGTKMASSKDNFISVDD 224

Query: 250 EMTSPYNFWQYWRNID 265
                Y  ++      
Sbjct: 225 TEEEIYRKFKKAFCKM 240


>gi|126459506|ref|YP_001055784.1| tyrosyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249227|gb|ABO08318.1| tyrosyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 336

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 113/348 (32%), Gaps = 40/348 (11%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           +     ++    L      G   AY+G++     +H G L     L  LQ+ G   + L+
Sbjct: 27  KNVEEVVTKEEFLR--LGGG--RAYLGFEPLWP-IHVGWLVWAYKLRELQEAGFDVVVLV 81

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + I D                + ++E+++       ++         +  E     
Sbjct: 82  ATWHAWIND----------------KGSLEELRRHGDEVRQFLGKVAQFKYVYGEELAKD 125

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
             Y +L   +    S+ R+     V  R   E  L F +  Y +LQ  D   L       
Sbjct: 126 PAYWELAVRVAKGASLARVRRATPVMGRRAEEVELDFAKLLYPVLQVADIFYL----GVD 181

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           + +GG DQ    +   D+ E+L   K  AL +P++T+ SG             ++E+   
Sbjct: 182 VAVGGVDQRRAHMLARDVAEKLGFKKPVALHTPIITSLSGV------GRMEGSHREIDEV 235

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           Y  ++  ++   + +        T P  E+++          E +     E+   +    
Sbjct: 236 YAMYKMSKSKPQSAI------FVTDPPEEVEKKVWAAYCPPREVRFNPVYELAAYLLIPY 289

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--GLLTLIVKAG 360
                        D    +       +S   +   +   L+ ++ K  
Sbjct: 290 HGPL-EVGGRRYEDPQALANDYKNGDVSPQALKDAVAKALIDMLAKLK 336


>gi|223673858|pdb|2ZP1|A Chain A, Structual Basis Of Iodo-Tyrosine Recognition By Engineered
           Archeal Tyrosyl-Trna Synthetase
          Length = 314

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 100/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +AYIG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +      DE R++                  +   +      A  +    
Sbjct: 63  IILLADLAAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSE 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   +  +    ++ R     S+    + +++    E  Y I+Q      L   
Sbjct: 108 FQLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNTSHYL--- 162

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 163 -GVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +       K  +A E+ 
Sbjct: 278 KNKELHPMYLKNAVAEELI 296


>gi|307354935|ref|YP_003895986.1| tyrosyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307158168|gb|ADN37548.1| tyrosyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 316

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 97/310 (31%), Gaps = 22/310 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L+ R  +  ++   EL  + +Q   + Y GY+ +   +H GHL  +  L  L+  G K 
Sbjct: 5   ELAIRNTVEVVT-EDELRAVMAQPEKSVYAGYEPSGE-IHLGHLVTINKLMDLRDAGFKV 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +      DE R +            +K                  +    
Sbjct: 63  VVLLANLHAFLNQKGTMDEVRELSDYNRRCFEAVGLK------------GKGVEFVLGTD 110

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
              + +Y   +  +    ++NR     + V   +   +     +  Y I+Q  D      
Sbjct: 111 IQLTSEYELNVLRLSQAITLNRAKRSMDEVGRNMDAPR---VSQMVYPIMQMVDI----H 163

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                + +GG DQ    +   +    +       + +P+L   +G KM  +    I +  
Sbjct: 164 TLGVDMALGGIDQRKIHMLAREYLPTIGAKAPLCMHTPILNGLNGKKMSSSEGNYISVAD 223

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
                    +      + +     + L       +  +   + ++    ++  + E    
Sbjct: 224 SEDEIRKKMKKAFCPPEIEENPVLQTLKYHVFPRMSTVTLKRPEKFGGDREFASYEECEA 283

Query: 310 VHGREEAEKA 319
            +   E   A
Sbjct: 284 AYAAGEIHPA 293


>gi|261403591|ref|YP_003247815.1| tyrosyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370584|gb|ACX73333.1| tyrosyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 313

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 90/253 (35%), Gaps = 29/253 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     I+   EL  +  +   +AYIG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 12  EIIKRNTSEIIT-EDELKEVLKKDSKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +          +    +EI++  +  K +F +          A  +    
Sbjct: 70  IILLADLHAYLN---------QKGELEEIKKIGDYNKRVFEAM------GLRAKYVYGSE 114

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   + ++    ++ R     S+    + +++    E  Y I+Q  D   L   
Sbjct: 115 FQLDSDYTLNVYKLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNDINYL--- 169

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               + +GG +Q    +   +L       K+  + +P+LT   G     +  G       
Sbjct: 170 -GVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGN--FIAV 222

Query: 251 MTSPYNFWQYWRN 263
             SP +     + 
Sbjct: 223 DDSPEDIRAKIKK 235


>gi|298675238|ref|YP_003726988.1| tyrosyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288226|gb|ADI74192.1| tyrosyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 319

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 100/279 (35%), Gaps = 25/279 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L +R     ++     +++ ++   TAY+GY+ +   +H GH+  +  L  LQ++G  
Sbjct: 4   EELIKRNLQEIVTEEELDELVATKNRPTAYVGYEPSGK-IHMGHVLTVNKLIDLQRSGFD 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+    + +          +    +E++E  E+ K  F   +  G        +   
Sbjct: 63  IIVLLADIHAYLN---------QKGSLEEVRELAEQNKRCF---LALGLDPDKTKFVFGS 110

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +  +  Y+  + ++    S+NR     + V  ++         +  Y I+QA D   L 
Sbjct: 111 DFQLNHDYMLNVLKLTQETSLNRAKRSMDEVGRKMDDP---KVSQMVYPIMQAVDIAML- 166

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              +  + + G DQ    +   +    +       + +P++    G KM  +    I ++
Sbjct: 167 ---EVDVAVSGIDQRKIHMLAREELPDVGYRSPTCIHTPIMLGLDGVKMSSSKENYISVD 223

Query: 249 KEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSE 283
                     +        ++D  V+   K        E
Sbjct: 224 DTEDDIKRKMKKAYCPAETVEDNPVLEIFKYHVFPRYDE 262


>gi|15679755|ref|NP_276873.1| tyrosyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334364|sp|O27795|SYY_METTH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2622897|gb|AAB86233.1| tyrosyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 319

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 84/256 (32%), Gaps = 21/256 (8%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             R  +  I+    +D+L     V  Y GY+ +   +H GH   +  L  LQ  G +   
Sbjct: 8   ITRDVLEVITPEELMDVLKKDEPV-VYTGYEPSGR-IHLGHALTVRKLRELQDAGFRVKI 65

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+    + +     +    R+    +  +           F+  G        +   ++ 
Sbjct: 66  LLADYHAYLN---GKGSMERIRELADYNQ---------KCFLALGLSPERTEFILGSSFQ 113

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
              +Y DL+  +    ++  + +  S+    +  +     E  Y ++Q  D V L     
Sbjct: 114 TEPEYTDLVYRLALITTL--LRAKRSMAQITRESRDHKVAEVIYPLMQVIDMVYL----G 167

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEM 251
             + +GG +Q    +   +   RL       + +PLL  T    KM  +    I ++   
Sbjct: 168 VDVALGGMEQRKIHMLARENLPRLGFDAPVCIHTPLLHGTDGSEKMSSSKGNFIAVDDSP 227

Query: 252 TSPYNFWQYWRNIDDA 267
                  +        
Sbjct: 228 DEIREKVKKSYCPMGE 243


>gi|52549026|gb|AAU82875.1| tyrosyl-tRNA synthetase [uncultured archaeon GZfos21B5]
          Length = 318

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 23/263 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S+ + IL ER     I+     ++L S+    AY+GY+ +   +H GHL  L  L
Sbjct: 1   MT--ESEPMRIL-ERNVEELITKDELEEVLSSKKKPRAYVGYEPSGR-VHIGHLPILNKL 56

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ G   I L+    + +               ++I+E  E  K  F++        
Sbjct: 57  KELQRFGFHIIVLLADLHAYLN---------EKGSLEQIRETAEYNKRCFAAAGLSD--- 104

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +   +   ++    +Y+  + ++ +  +  R     S+    + ++     +  Y ++Q
Sbjct: 105 -ETEFIFGSSFQLDNEYMMNVLKLATVTTEKRA--KRSMDELSRSKEDRKVSQTIYPLMQ 161

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D   L    D  + +GG DQ    +   +   +L       +  PLL    G KM  +
Sbjct: 162 AVDIAYL----DIDVAVGGIDQRKIHMLSRENIPKLGFKAPICIHMPLLIGLDGEKMSSS 217

Query: 241 LSGAIWLNKEMTSPYNFWQYWRN 263
           L   I +++   S          
Sbjct: 218 LGNYIAVDEPAKSVEKKIMSAFC 240


>gi|323463147|pdb|3QE4|A Chain A, An Evolved Aminoacyl-Trna Synthetase With Atypical
           Polysubstrate Specificity
 gi|323463148|pdb|3QE4|B Chain B, An Evolved Aminoacyl-Trna Synthetase With Atypical
           Polysubstrate Specificity
          Length = 312

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 101/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I ++    + +      DE R++                  +   +      A  +    
Sbjct: 63  IIVLADLHAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSE 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+    Y   +  +    ++ R     S+    + +++    E  Y I+Q      L   
Sbjct: 108 WMLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNGAHYL--- 162

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 163 -GVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|330834002|ref|YP_004408730.1| tyrosyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566141|gb|AEB94246.1| tyrosyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 358

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 114/357 (31%), Gaps = 20/357 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     +++      L     +  Y+G++ +    H G L        L + G +  
Sbjct: 7   LITRNAAEVVTSEELKQKLEEGRKLKGYLGFEPSGL-FHIGWLIWAQKFKDLMEAGVEMN 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + I D     +   +  + E   N+            +G  +    +++ E  
Sbjct: 66  LLVATWHAWINDKLG-GKMEMIKLAGEYAVNVLNA---------FGISRNKINVIDAEDI 115

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y  L+ ++    S+ RM    ++  R   E  L   +  Y  +Q  D   +    
Sbjct: 116 VKDKDYWSLVLKVAKNTSLARMKRALTIMGRKADEAELDSSKLIYPAMQVSDIFYM---- 171

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAIWLNKE 250
           D  + +GG+DQ    +   D  E+L   K+ A+ +PLL     G +M         + + 
Sbjct: 172 DLDIALGGTDQRKAHMLARDAAEKLGKKKVIAIHTPLLVGLQGGQRMSPGAEEDEVMAEI 231

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S           D+ + VS    +   P   I+       +        +      + 
Sbjct: 232 KMSKSKPDTAIFIDDEPETVSSKLMMAYCPKGVIENN--PVLQINKYILFTVDNNGLKVE 289

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              +        + +  + S     +    +      +   +L  + K+    S +E
Sbjct: 290 RESKFGGDIHFTSYKDLEESFAEGRLHPKDLKMATARKLNQILDPLRKS--IKSRSE 344


>gi|312136697|ref|YP_004004034.1| tyrosyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224416|gb|ADP77272.1| tyrosyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 321

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 87/258 (33%), Gaps = 22/258 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L+++G +  I+   EL  +  +    AYIGY+ +   +H GHL  +  +  LQK G K 
Sbjct: 6   ELAKKGTVEIIT-IEELKEVLKKKNPVAYIGYEPSGK-IHLGHLITIKKMIDLQKIGFKI 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +      DE R +    +       +               D   +    
Sbjct: 64  KILLADYHAYLNYKGELDEIREIAEYNKRCFLAMGL-------------SKDTEFILGSE 110

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y+  L  +    ++NR     S+   ++        E  Y ++Q  D V L   
Sbjct: 111 FQTDDDYVLDLYRLAHITTLNRA--KRSMSQIIREAGEHKVSEVLYPLMQVIDMVHL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNK 249
               + +GG +Q    +   D   ++       + +P++  T    KM  +    I ++ 
Sbjct: 166 -GVDVSVGGMEQRKIHMLARDNLPKIGYTPPVCIHTPIIHGTDGSEKMSSSKGNFIAVDD 224

Query: 250 EMTSPYNFWQYWRNIDDA 267
                 +           
Sbjct: 225 PPKVIKDKIMKSYCPAAK 242


>gi|282165094|ref|YP_003357479.1| tyrosyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282157408|dbj|BAI62496.1| tyrosyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 316

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 91/254 (35%), Gaps = 21/254 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R     ++   EL  L  +    + Y+GY+ +  ++H GH+  +  L   Q  G K
Sbjct: 5   ELVTRNVEEVVT-MDELKKLLEEKAHPSVYVGYEPSG-NVHLGHMITVNKLIDCQNAGFK 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +          R     EI++  E  K  F   I  G  + +   +   
Sbjct: 63  VTVLLADLHAYLN---------RKGTMAEIEKIAEYNKRCF---IALGLSEENTRFVLGS 110

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  S +Y   +  +    ++NR        SR   +  +S  +  Y ++Q+ D   L  
Sbjct: 111 SYQLSPEYEMNVLRMACDTTLNRAKRSMDEVSRDAEDPHVS--QMIYPLMQSMDIATL-- 166

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             D  +  GG DQ    +   +    +       L +P+L    GTKM  +    I +++
Sbjct: 167 --DVDVAAGGIDQRKIHMIAREQLPTMGFKSPVCLHTPILLGLDGTKMSSSKGNNISVDE 224

Query: 250 EMTSPYNFWQYWRN 263
              S          
Sbjct: 225 PAESVTKKIDKAFC 238


>gi|268325083|emb|CBH38671.1| tyrosyl-tRNA synthetase [uncultured archaeon]
          Length = 334

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 100/263 (38%), Gaps = 23/263 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S+ + IL ER     I+     ++L S+    AY+GY+ +   +H GHL  L  L
Sbjct: 17  MT--ESEPMRIL-ERNVEELITKGELEEVLSSKKKPRAYVGYEPSGR-VHIGHLPILNKL 72

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ G   I L+    + +               ++IQE  E  K  F++        
Sbjct: 73  KELQRFGFHIIVLLADLHAYLN---------EKGSLEQIQETAEYNKRCFAAAGLSD--- 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +   +   ++    +Y+  + ++ +  +  R     S+    + ++     +  Y ++Q
Sbjct: 121 -ETEFIFGSSFQLDNEYMMNVLKLATVTTEKRA--KRSMDELSRSKEDRKVSQTIYPLMQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D   L    D  + +GG DQ    +   +   +L       +  PLL    G KM  +
Sbjct: 178 AVDIAYL----DIDVAVGGIDQRKIHMLSRENIPKLGFKAPICIHMPLLIGLDGEKMSSS 233

Query: 241 LSGAIWLNKEMTSPYNFWQYWRN 263
           L   I +++   S          
Sbjct: 234 LGNYIAVDEPAKSVEKKIMSAFC 256


>gi|289192406|ref|YP_003458347.1| tyrosyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938856|gb|ADC69611.1| tyrosyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 301

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 89/252 (35%), Gaps = 29/252 (11%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +R     IS   EL  + ++   +AYIG++ +   +H GH  Q+  +  LQ  G   I
Sbjct: 1   MIKRNTSEIIS-EEELKEVLTKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDII 58

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + +      DE R++          E  K +F +          A  +    +
Sbjct: 59  ILLADLHAYLNQKGELDEIRKI---------GEYNKRVFEAM------GLKAKYVYGSEF 103

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                Y   + ++    ++ R     S+    + +++    E  Y I+Q  D   L    
Sbjct: 104 QLDKDYTLNVYKLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNDIHYL---- 157

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              + +GG +Q    +   +L       K+  + +P+LT   G     +  G        
Sbjct: 158 GVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGN--FIAVD 211

Query: 252 TSPYNFWQYWRN 263
            SP       + 
Sbjct: 212 DSPEEIKAKIKK 223


>gi|145592304|ref|YP_001154306.1| tyrosyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145284072|gb|ABP51654.1| tyrosyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 314

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 115/348 (33%), Gaps = 40/348 (11%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     ++       L +     AY+G++     +H G L     L  L++ G   + L+
Sbjct: 5   RNVEEVVTKEE----LLNMKGGLAYLGFEPLWP-IHVGWLVWAYKLAELKEAGFDVVILV 59

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + + D                + +I +++      I           +  +     
Sbjct: 60  ATWHAWVND----------------KGDISQLRAHGEKVIAVLDKIAKFRYVYGDEIAKD 103

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
            +Y +L+  I    S+ R+     +  R   E  L F +  Y ++Q  D   L       
Sbjct: 104 PRYWELVMRIAKETSLARIRRATPIMGRRAEEVELDFSKLLYPVMQVADIFYL----GVD 159

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           + +GG DQ    +   D+ E+L   K  A+ +P++T+ SGT            ++E+   
Sbjct: 160 VAVGGMDQRRAHMLARDVAEKLGFKKPVAIHTPIITSLSGT------GRMEGTHREIDEV 213

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           Y  ++  ++   + +      +T     E+            E K     EI   +    
Sbjct: 214 YALFKMSKSKPQSAI-----FITDGE-EEVRNKIWAAFCPPREIKFNPVFEIAAYLLIPY 267

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--GLLTLIVKAG 360
                        D S   +   +  ++  ++   +   L+ L+ K  
Sbjct: 268 HGPL-EVGGRRYDDKSALEKDYQSGVVTPQQLKEAVAASLVALLQKLK 314


>gi|150403186|ref|YP_001330480.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150034216|gb|ABR66329.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 309

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 95/267 (35%), Gaps = 27/267 (10%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            +I +  EL  L       AYIG++ +   +H GH  Q+  +  LQK G K I L+    
Sbjct: 10  SEIISIEELAELLKNEEKIAYIGFEPSGR-IHMGHYLQIRKMIDLQKAGFKIIILLADLH 68

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +          +    +E++   E+ + +F +          A  +    +    +Y 
Sbjct: 69  AYLN---------QKGTMEEVRALGEENRKVFEAMGLV------ADYVYGSEFQLKDEYT 113

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             + ++    ++NR      V +R             Y ++Q  D   L    +  + +G
Sbjct: 114 LDVYKLALSTTLNRARRSMEVIAREDENP--KVASVVYPLMQVNDIKHL----NADVAVG 167

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +  +    
Sbjct: 168 GMEQRKIHMLSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDDEDTIKKK 227

Query: 258 WQYWRN----IDDADVVSFAKRLTTLP 280
            +        +    V+  AK     P
Sbjct: 228 MKNAFCPMKEVSGNPVLEIAKYYLEYP 254


>gi|116754354|ref|YP_843472.1| tyrosyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|116665805|gb|ABK14832.1| tyrosyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 325

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 88/254 (34%), Gaps = 21/254 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++     ++L ++    AY+GY+ T+ ++H GH+     L  +Q+ G   
Sbjct: 5   ELVIRNTEEVVTLEELQEMLDAREHPRAYVGYE-TSGNIHLGHMLTANKLLDMQRAGFDV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +      ++       +    N E        FI  G        +    
Sbjct: 64  VVLLADLHAFLN-----EKGSLEEVRRIADYNREC-------FIALGLDPERTEFVYGTE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +    +Y+  + ++    ++NR     + V    +        +  Y ++QA D      
Sbjct: 112 YQLRPEYVIKVLQMARNTTLNRARRSMDEVSRSAENPM---VSQMIYPLMQAVDI----A 164

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +    + +GG DQ    +   +   +L  P    + +PL+    G KM  +    I +++
Sbjct: 165 DLKIDVAVGGMDQRKIHMLAREELPKLGFPAPVCIHTPLIPGLDGKKMSSSKGNNIAVDE 224

Query: 250 EMTSPYNFWQYWRN 263
                         
Sbjct: 225 PAEEIERKILAAYC 238


>gi|147919431|ref|YP_686830.1| tyrosyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110622226|emb|CAJ37504.1| tyrosyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 316

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 104/322 (32%), Gaps = 45/322 (13%)

Query: 12  LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  R     ++   EL  L         Y+GY+ +  ++H GH+  +  L   Q  G + 
Sbjct: 6   LVTRNVEEVVT-IDELKSLMDANPHPKVYVGYEPSG-NIHLGHMITVNKLIDCQNAGFEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +          R    +EI +  E  K  F   I  G  +     +   +
Sbjct: 64  TVLLADLHAYLN---------RKGTMEEIAKIAEYNKRCF---IAMGLSEDRTRFVLGTS 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  S KY   +  +    ++NR        SR   +  +S  +  Y ++QA D   L   
Sbjct: 112 YQLSPKYETDVLRLACDTTLNRARRSMDEVSRDAEDPRVS--QMVYPLMQALDIAYL--- 166

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            D  + MGG DQ    +   +    L       L +P+L    GTKM  +    I +++ 
Sbjct: 167 -DVDVAMGGIDQRKIHMLARESLPSLGYKSPICLHTPILLGLDGTKMSSSKGNNISVDEP 225

Query: 251 MTSP------------------------YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
             S                         Y+ +  + +I           +T      +  
Sbjct: 226 AESVTKKIEKAFCPIGVTENNPVLDLFRYHIFMKYDSITIERPEKHGGNITFDSYEALRN 285

Query: 287 MAKLQGKEINEAKKIIATEITT 308
               +     + KK  A  +  
Sbjct: 286 DFAEKKVHPMDLKKAAAKYMNQ 307


>gi|322368229|ref|ZP_08042798.1| tyrosyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320552245|gb|EFW93890.1| tyrosyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 325

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 89/255 (34%), Gaps = 22/255 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++     ++        AY+GY+ +   LH GH+     L  LQ+ G + 
Sbjct: 5   ELISRNAEELVTEAEVRELAEDPEGKRAYVGYEPSG-VLHIGHMLTANKLIDLQEAGFEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + D             +EI+E  E++K  F   I YG  + +        
Sbjct: 64  VILLADVHAYLNDKG---------SFEEIRETAERMKEQF---IAYGLDEENTEFRFGSE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y+  L  +    ++NR        S ++  +S    +  Y ++Q+ D   L   
Sbjct: 112 FQMDDDYVLDLHALELETTLNRASRA---MSEIQSGESTKVSQAVYPLMQSLDIEYL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLN 248
            D  L +GG +Q    +   D    +       L +PL+   ++   KM  +    I + 
Sbjct: 166 -DLDLAIGGMEQRKVHMLARDTLPSIGYESPTCLHTPLIAELSSGEGKMSSSKGVTISME 224

Query: 249 KEMTSPYNFWQYWRN 263
                          
Sbjct: 225 DSTEDIEEKVNGAFC 239


>gi|288931160|ref|YP_003435220.1| tyrosyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288893408|gb|ADC64945.1| tyrosyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 324

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 91/254 (35%), Gaps = 21/254 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R     ++     ++L ++    AY+GY+ +   +H GH+  +  L  LQ  G   
Sbjct: 8   ELVKRNAEEIVTEEELKELLETKDKPRAYVGYEPSGE-IHLGHMMTVNKLLDLQDAGFDV 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + +    +E R++    +              F+  G  ++    +    
Sbjct: 67  VVLLADVHAYLNEKGDFEEIRKIAEYNKAA------------FVALGLDESKTEFVLGSE 114

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S  Y+  + ++    +VNR     + V  R +        +  Y ++QA D   L  
Sbjct: 115 FQLSRDYVLDVLKMARITTVNRARRSMDEVSRRKEDPM---VSQMIYPLMQALDIAHLR- 170

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                L +GG DQ    +   +   RL       L +P+L    G KM  +    I +  
Sbjct: 171 ---IDLAVGGIDQRKIHMLARENLPRLGYRSPICLHTPILVGLDGEKMSSSKGNYISVRD 227

Query: 250 EMTSPYNFWQYWRN 263
                Y   +    
Sbjct: 228 SEEEVYRKIKKAFC 241


>gi|126465789|ref|YP_001040898.1| tyrosyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014612|gb|ABN69990.1| tyrosyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 362

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 96/286 (33%), Gaps = 27/286 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  +  I+      +   +     YIG++ +   +H G L  +  +  L + G    
Sbjct: 9   LASRNTVEVITLEDLKKVFEEKEHPRGYIGFEPSGL-VHVGWLVWMNKVRDLLEAGVDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D    D          +    +  + +      +G   +    ++ E  
Sbjct: 68  ILEATWHAYINDKLGGD----------MDLIRKAARLVRKVMEGFGIDVSKIKFVDAEEL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y  +L       S+ R+    ++  R   E    F +  Y ++Q  D   L    
Sbjct: 118 VSDKDYWGILVRSAKNVSLARVKRALTIMGRKSEEAETDFSKLIYPLMQVSDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           D  + +GG+DQ    +   D+ E++   K  A+ +P++T   G          + +  E+
Sbjct: 174 DLDIALGGTDQRKAHMLARDIAEKIGRKKPVAIHTPIITGLKGP------GRRMDIVGEI 227

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
              Y   +  ++  +  +          P  EI    +       E
Sbjct: 228 DEVYATHKMSKSKPETAI------FVHDPPEEIRAKIRKAYCPPRE 267


>gi|302349168|ref|YP_003816806.1| Tyrosyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302329580|gb|ADL19775.1| Tyrosyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 358

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 95/272 (34%), Gaps = 16/272 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  I+     + + S   +  YIGY+ +  + H GHL  +  +  L + G +  
Sbjct: 9   LITRNLVEVITYDELKEKVSSGAQLKGYIGYEPSGLA-HIGHLIWMFKVKDLVEAGVQFN 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     ++I D    +       +   +                         ++ ET 
Sbjct: 68  VLEATWHAMINDKFGGNMELIRRAAVLFR----------EIMRSLDIPVDRINFVDAETM 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y  L+ ++    S+ RM    ++  R   E  L   +  Y  +Q  D + +    
Sbjct: 118 VSDKDYWALVLKVMKMTSLARMKRALTIMGRTMDEAELDSSKLVYPAMQVSDIIYM---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           D  + +GG DQ    +   ++ ER+   K+ AL +P+LT    G +M    S       +
Sbjct: 174 DLDIALGGLDQRKAHVLQREVAERMGRKKVIALHTPILTGLEGGKRMDNVESDEQAAAFK 233

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
           M+        + N     V +  +     P  
Sbjct: 234 MSKSKASSAIFLNDSPEQVRAKIRAAYCPPRQ 265


>gi|153825695|ref|ZP_01978362.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149740632|gb|EDM54741.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 169

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 16/182 (8%)

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--E 294
           M K+    I +++    P   +    +I D  + S+ + L+  P+ E+ +          
Sbjct: 1   MSKSAHNYIGVSEA---PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGAN 57

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  
Sbjct: 58  PRDIKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISN 112

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+ +AG   ST++A R +K  A+K++   + + KL          G      GK+     
Sbjct: 113 LLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARV 166

Query: 415 HL 416
            +
Sbjct: 167 TI 168


>gi|213422061|ref|ZP_03355127.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
          Length = 62

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 33/59 (55%)

Query: 6  SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
          S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q
Sbjct: 4  SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQ 62


>gi|18312976|ref|NP_559643.1| tyrosyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74563801|sp|Q8ZW77|SYY2_PYRAE RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|18160474|gb|AAL63825.1| tyrosyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 316

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 121/348 (34%), Gaps = 40/348 (11%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
                ++    L      G  +AY+G++     +H G L     L  L++ G   I L+ 
Sbjct: 7   NVEEVVTREEFLR--LKGG--SAYLGFEPLWP-IHIGWLIWAYKLAELKEAGFDVIVLVA 61

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + I D             +E++ + E+++ +     K+         +  +      
Sbjct: 62  TWHAWINDKG---------SIEELRAHGERVRAVLDRIGKFKY-------VYGDDVAKDP 105

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
           KY +L+ +I    S+ R+     V  R   E  L F +  Y ++Q  D   L       +
Sbjct: 106 KYWELVVKIAKETSLARVKRATPVMGRRAEEVELDFSKLMYPLMQVADIFYL----GVDV 161

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
            +GG DQ    +   D+ E+L   K  AL +P++T+ SGT            ++E+   Y
Sbjct: 162 AVGGMDQRRAHMLARDVAEKLGLKKPIALHTPIITSLSGT------GRMEGTHREIDEVY 215

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
             ++  ++   + ++       T    ++ +          E K     EI   +     
Sbjct: 216 AMYKMSKSKPQSAILI------TDSEEDVRKKIWAAYCPPRETKFNPVFEIAAYLLIPYH 269

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--GLLTLIVKAGF 361
                       + +   +      ++  E+   +   L+ L+ K   
Sbjct: 270 GPL-EIKGRRYEEGNALERDYREGVVTPQELKEAVASALVGLLSKLKL 316


>gi|303244369|ref|ZP_07330705.1| tyrosyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485264|gb|EFL48192.1| tyrosyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 316

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 100/316 (31%), Gaps = 44/316 (13%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            ++ +  EL  + ++    AYIG++ +   +H GH  Q+  +  LQ  G   I L+    
Sbjct: 17  SEVISVDELKNVMNKDKKIAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLH 75

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +     +     +    E  +N+            +      A  +    +     Y 
Sbjct: 76  AYLN---QKGTLEEIHELAEYNKNV------------FNAMGLKAKYIYGSEFQLEKDYT 120

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             +  I    ++ R      V +R          E  Y ++Q  D   L    +  + +G
Sbjct: 121 LDVYRIALKTTLKRARRSMEVIAREDENP--KVAEVVYPLMQVNDIKHL----NVDVAVG 174

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G +Q    +   ++   +       + +P+LT   G  KM  +    I ++ E  +  + 
Sbjct: 175 GMEQRKIHMLAREILPNMGYKSPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDEPNTIKSK 234

Query: 258 WQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            +                         I       F   +       +++M   +     
Sbjct: 235 VKKAYCPIGIVEGNPILELAKYYLNYPITIERPEKFGGNIVINDYETLEKMYSEKKLHPM 294

Query: 297 EAKKIIATEITTMVHG 312
           + K  +A EI  ++  
Sbjct: 295 DLKGAVAKEIIEILAP 310


>gi|20093954|ref|NP_613801.1| tyrosyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74560761|sp|Q8TXZ2|SYY_METKA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19886910|gb|AAM01731.1| Tyrosyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 324

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 20/257 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  ++      +L  +    AY+G++ +   +H GH   +  +  LQ+ G   I
Sbjct: 9   LVTRNAVEVVTEEELRQLLEEKEEPVAYVGFEPSGK-VHLGHKLVIDKMIDLQEAGFHVI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + + +    +E R +                   F+  G        +    +
Sbjct: 68  ILLADLHAYLNEKGTLEEVRELADYNR------------RCFLAMGLDPNKTEFVLGSEF 115

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                Y   +  +    ++ R      + +R +    +S  +  Y ++QA D V L    
Sbjct: 116 QLDEDYALDVYRMARHTTMRRARRSMDMIARSEENPPVS--QVVYPLMQALDIVHL---- 169

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKE 250
           +  L +GG +Q    +   D+  +L       L +P++       KM  + +  I ++ E
Sbjct: 170 NVDLAVGGLEQRKIHMLARDVLPKLGYDSPTCLHTPIIHGLDGDEKMSSSKNNFIAVDDE 229

Query: 251 MTSPYNFWQYWRNIDDA 267
                   +        
Sbjct: 230 PEVIREKLRKAYCPARE 246


>gi|207108556|ref|ZP_03242718.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 107

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 7/109 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L      +        G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAK 107


>gi|91773428|ref|YP_566120.1| tyrosyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121689184|sp|Q12W06|SYY_METBU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|91712443|gb|ABE52370.1| Tyrosyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 317

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 21/241 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R     ++      +L ++   +AY GY+ +   +H GH+  +  L  LQK G + 
Sbjct: 5   DLIKRNVQEIVTEEELTKLLETKKHPSAYTGYEPSGK-IHMGHVLTVNKLLDLQKAGFEI 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +      DE R+     +              F+  G        +    
Sbjct: 64  TVLLADVHAYLNQKGTMDEVRKTADYNK------------KCFLALGLDPEMTNFVYGSD 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y+  + ++    S+NR     + V  +++        +  Y I+QA D      
Sbjct: 112 FQLSPEYMLNVLKLTQATSLNRAKRSMDEVGRKMEDP---KVSQMVYPIMQAVDI----A 164

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                + +GG DQ    +   +    L       + +P+L    GTKM  +    I ++ 
Sbjct: 165 LLGVDVAVGGIDQRKIHMLAREGLPGLGFKAPLCIHTPILLGLDGTKMSSSNENYISVDD 224

Query: 250 E 250
           +
Sbjct: 225 D 225


>gi|305662965|ref|YP_003859253.1| tyrosyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377534|gb|ADM27373.1| tyrosyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 361

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 115/355 (32%), Gaps = 21/355 (5%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R  +  ++     +I  ++  +  YIG++ +    H G L        L   G + 
Sbjct: 8   ELVKRNTVEIVTEDELRNIFLNKKDIRGYIGFEPSGI-FHLGWLIWAYKFKDLVDAGVEM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I       + I D    +          +       + +       G   +   ++  E 
Sbjct: 67  ILYAATWHAWINDKLGGN----------MDLIRAAARHVAYVLSAIGVNMSRVRIVYAED 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +  + Y + +  I    S++R+    ++  R   E  L F +  Y ++Q  D  E+   
Sbjct: 117 IVSRVSYWEKVLRIAKSSSLSRIKRALTILGRRADEAELDFSKLIYPLMQVADIFEM--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI--WLN 248
            D  + +GG DQ    +   D+ E+L   K  A+ +PLL +  G          I     
Sbjct: 174 -DLDIALGGLDQRKAHMLARDVAEKLGFKKPIAIHTPLLPSLKGVSRMSFEGMEIDDIAA 232

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATE 305
           +   S          ID  + +    R    P  E++    +   +       KK    +
Sbjct: 233 ETKMSKSKPEDAIFVIDSDEAIERKIRSAYCPPREVENNPIMSIAKYIVFRGEKKRFVID 292

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
                 G  E            +  IH   +   +++K+ +     +  ++    
Sbjct: 293 RKPEYGGSIEVYSYEELENLYREGKIHPLDLKN-TVAKELIKIVKPIRDMLQANK 346


>gi|119873262|ref|YP_931269.1| tyrosyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674670|gb|ABL88926.1| tyrosyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 315

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 105/295 (35%), Gaps = 37/295 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     ++    L      G   AY+G++     +H G L     L  L++ G   + L+
Sbjct: 6   RNVEEVVTKEEFLS--LRGG--LAYLGFEPLWP-IHVGWLVWAYKLAELREAGFDVVVLV 60

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + I D    +E R          + EK+K +     K+         +  +     
Sbjct: 61  ATWHAWINDKGALEELR---------SHGEKVKAVLDKIGKFKY-------VYGDEIARD 104

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
            +Y +L+ +     S+ R+     V  R   E  L F +  Y I+Q  D   L       
Sbjct: 105 PRYWELVVKTAKETSLARVRRATPVMGRRMEEVELDFSKLLYPIMQVADIFYL----GVD 160

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           + +GG DQ    +   D+ E+L   K  A+ +P++T+ SGT            ++E+   
Sbjct: 161 VAVGGMDQRRAHMLARDVAEKLGFKKPVAIHTPIITSLSGT------GRMEGTHRELDEV 214

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           Y  ++  ++   + +        T    E+ R          E K     EI T 
Sbjct: 215 YAMYKMSKSKPQSAIFI------TDSEEEVRRKIWAAYCPPRETKFNPVFEIATY 263


>gi|171185257|ref|YP_001794176.1| tyrosyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934469|gb|ACB39730.1| tyrosyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 319

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 57/295 (19%), Positives = 106/295 (35%), Gaps = 37/295 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     ++    L+     G   AY+G++     +H G L     L  L++ G   + L+
Sbjct: 6   RNVEEVVTKEEFLN--LRGG--VAYLGFEPLWP-IHVGWLVWAHKLAELREAGFDVVVLV 60

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + I D             +E++ + EK+K +     K+         +  +     
Sbjct: 61  ATWHAWINDKG---------SLEELRSHGEKVKAVLDKIGKFKY-------VYGDEIAKD 104

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
            +Y +L+ +     S+ R+     V  R   E  L F +  Y I+Q  D   L       
Sbjct: 105 PRYWELVVKTAKETSLARVRRATPVMGRRTEEVELDFSKLLYPIMQVADIFYL----GVD 160

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           + +GG DQ    +   D+ ERL   K  A+ +P++T+ SGT            ++E+   
Sbjct: 161 VAVGGMDQRRAHMLARDVAERLGFKKPVAIHTPIITSLSGT------GRMEGTHRELDEV 214

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           Y  ++  ++   + ++            E+ R          E K     EI   
Sbjct: 215 YAMYKMSKSKPQSAILVTDAE------EEVRRKIWAAYCPPRETKFNPVFEIAAY 263


>gi|256810829|ref|YP_003128198.1| tyrosyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794029|gb|ACV24698.1| tyrosyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 306

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 103/317 (32%), Gaps = 49/317 (15%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
            +R    +I +  EL  +  +   +AYIG++ +   +H GH  Q+  +  LQ  G   I 
Sbjct: 7   IKRNT-AEIVSEEELKEVLKKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIII 64

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+    + +          +     EI+E  E  + +F +          A  +    + 
Sbjct: 65  LLADLHAYLN---------QKGELDEIREIGEYNRRVFEAM------GLKAKYVYGSEFQ 109

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               Y   +  +    ++ R     S+    +  ++    E  Y I+Q  D   L     
Sbjct: 110 LDKDYTLNVYRLALKTTLKRA--RRSMELIAREVENPKVAEVIYPIMQVNDIHYL----G 163

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++   
Sbjct: 164 VDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDTP 219

Query: 252 TSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMAKL 290
                  +                         +       F   L      E++R+   
Sbjct: 220 EDIRAKVKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLVVNSYEELERLFIN 279

Query: 291 QGKEINEAKKIIATEIT 307
           +     + K  +A E+ 
Sbjct: 280 KELHPMDLKNAVAEELI 296


>gi|145635108|ref|ZP_01790814.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267716|gb|EDK07714.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 169

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 16/182 (8%)

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKE 294
           M K+L   I + +    P + +    +I D  +  +   L+  P+SEI   +    +GK 
Sbjct: 1   MSKSLGNYIGVTEA---PSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKN 57

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K ++A E+    H  E A  A    +  F        MP  + S +     +GL T
Sbjct: 58  PRDVKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLAT 112

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+ +AG   ST+EA R  +   +KIN   + N K      D    G      GK+     
Sbjct: 113 LLKEAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNFYQVGKRKFARV 166

Query: 415 HL 416
            +
Sbjct: 167 TV 168


>gi|45357826|ref|NP_987383.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74555880|sp|Q6M0K7|SYY_METMP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|45047386|emb|CAF29819.1| Tyrosyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 319

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 89/250 (35%), Gaps = 23/250 (9%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            +I +  EL  L  +    AYIG++ +   +H GH  Q+  +  LQK G K + L+    
Sbjct: 20  SEIVSIEELTELLKKEEKIAYIGFEPSGR-IHMGHYLQIRKMIDLQKAGFKIVILLADLH 78

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +          +     E++   E+ + +F +          A  +    +    +Y 
Sbjct: 79  AYLN---------QKGTMDEVRALGEENRKVFEAMGLV------ADYVYGSEFQLKDEYT 123

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             + ++    ++NR      V +R             Y ++Q  D   L    +  + +G
Sbjct: 124 IDVYKLALSTTLNRARRSMEVIAREDENP--KVASVVYPLMQVNDIKHL----NADVAVG 177

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +  +    
Sbjct: 178 GMEQRKIHMLSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDDEATIKKK 237

Query: 258 WQYWRNIDDA 267
            +        
Sbjct: 238 MKNAFCPMKE 247


>gi|93278582|pdb|1ZH6|A Chain A, Crystal Structure Of P-Acetylphenylalanine-Trna Synthetase
           In Complex With P-Acetylphenylalanine
          Length = 314

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 99/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +      DE R++                  +   +      A  +    
Sbjct: 63  IILLADLHAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSE 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   +  +    ++ R     S+    + +++    E  Y I+Q          
Sbjct: 108 FQLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNG----CHY 161

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 162 RGVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|297527541|ref|YP_003669565.1| tyrosyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256457|gb|ADI32666.1| tyrosyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 362

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 96/286 (33%), Gaps = 27/286 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  +  ++      +   +  +  YIG++ +   +H G L  +  +  L + G    
Sbjct: 9   LASRNTVEIVTLEDLKKVFEEKEHLRGYIGFEPSGL-VHVGWLVWMNKVRDLLEAGVDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D    D          +    +  + +      +G   +    ++ E  
Sbjct: 68  VLEATWHAYINDKLGGD----------LDLIRKAARLVRKVMEGFGIDVSRIKFVDAEEL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y + L       S+ R+    ++  R   E    F +  Y ++Q  D   L    
Sbjct: 118 VSDKDYWETLIRSAKNVSLARVKRALTIMGRKSDEAETDFSKLIYPLMQVSDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           D  + +GG+DQ    +   D+ E++   K  A+ +P++T   G          + +  E+
Sbjct: 174 DLDIVLGGTDQRKAHMLARDIAEKIGRKKPIAIHTPIITGLKGP------GRRMDVVGEI 227

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
              Y   +  ++  +  +             EI    +       +
Sbjct: 228 DEVYAAHKMSKSKPETAI------FVHDSPEEIKAKIRKAYCPPRK 267


>gi|134046437|ref|YP_001097922.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132664062|gb|ABO35708.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 309

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 90/250 (36%), Gaps = 23/250 (9%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            +I +  EL  L  +    AYIG++ +   +H GH  Q+  +  LQK G K + L+    
Sbjct: 10  SEIVSSEELAELLKKEEKIAYIGFEPSGR-IHMGHYLQIRKMIDLQKAGFKILILLADLH 68

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +          +    +E++   E+ + +F +          A  +    +    +Y 
Sbjct: 69  AYLN---------QKGTMEEVRALGEENRKVFEAMGLV------ADYVYGSEFQLKDEYT 113

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             + ++    ++NR      V +R             Y ++Q  D   L    +  + +G
Sbjct: 114 IDVYKLALSTTLNRARRSMEVIAREDENP--KVASVVYPLMQVNDIKHL----NADVAVG 167

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +  +    
Sbjct: 168 GMEQRKIHMLSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDDEATIKKK 227

Query: 258 WQYWRNIDDA 267
            +        
Sbjct: 228 MKNAFCPMKE 237


>gi|159905077|ref|YP_001548739.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886570|gb|ABX01507.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 311

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 91/252 (36%), Gaps = 23/252 (9%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            +I +  EL  L  +    AYIG++ +   +H GH  Q+  +  LQK G K + L+    
Sbjct: 10  SEIVSVEELTELLKKEEKIAYIGFEPSGR-IHMGHYLQIKKMIDLQKAGFKIVILLADLH 68

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +          +    +E++   E+ + +F +          A  +    +    +Y 
Sbjct: 69  AYLN---------QKGTMEEVRALGEENRKVFEAMGLV------ADYVYGSEFQLKDEYT 113

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             + ++    ++NR      V +R             Y ++Q  D   L    +  + +G
Sbjct: 114 IDVYKLALSTTLNRARRSMEVIAREDENP--KVASVVYPLMQVNDIKHL----NADVAVG 167

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +  +    
Sbjct: 168 GMEQRKIHMLSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDDEDTIKKK 227

Query: 258 WQYWRNIDDADV 269
            +         +
Sbjct: 228 MKNAFCPMKEVL 239


>gi|330506513|ref|YP_004382941.1| tyrosyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328927321|gb|AEB67123.1| tyrosyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 319

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 27/278 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R     ++   EL  L  +     AY+GY+ T+  +H GH+     L  LQ+ G  
Sbjct: 5   ELVMRNTEEIVT-VDELKGLLEKPSRPRAYVGYE-TSGKVHLGHMLTANKLLDLQRAGFD 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + L+    + +               +E+++  +  +  F +    G        +   
Sbjct: 63  VVVLLADLHAFLN---------EKGTLEEVRQIADYNRDCFMAL---GLDPERTEFVYGT 110

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +     ++  + ++    S+NR     + V    +        +  Y ++QA D     
Sbjct: 111 DYQLQPDFMLKILQMARNTSLNRARRSMDEVSRNAENPM---VSQMIYPLMQAVDI---- 163

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            +    L +GG DQ    +   +   RL  P    L +PL+   +G KM  +    I ++
Sbjct: 164 ADLKIDLAVGGIDQRKIHMLAREELPRLGLPAPVCLHTPLIPGLNGEKMSSSKGNNIAVD 223

Query: 249 KEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMS 282
           +         +        +++  V++  K      M 
Sbjct: 224 EPAQDVEKKIKSAFCPAKVVENNPVLAICKYHVFPRME 261


>gi|310942792|pdb|3N2Y|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With P-(2- Tetrazolyl)-Phenylalanine
 gi|310942793|pdb|3N2Y|B Chain B, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With P-(2- Tetrazolyl)-Phenylalanine
          Length = 314

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 101/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I ++    + +      DE R++                  +   +      A  +    
Sbjct: 63  IIILADLHAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSE 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           ++    Y   +  +    ++ R     S+    + +++    E  Y I+Q      +   
Sbjct: 108 FMLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNGIHYV--- 162

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 163 -GGDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|70605926|ref|YP_254796.1| tyrosyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|108861907|sp|Q4JCH6|SYY_SULAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68566574|gb|AAY79503.1| tyrosyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 361

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 110/370 (29%), Gaps = 31/370 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     I+       L     +  YIG++ +    H G L     L  L K G    
Sbjct: 9   LITRNTDEVITIDELKKKLEENSKLKGYIGFEPSGL-FHIGWLIWAQKLKDLIKAGVDMS 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    ++I D    D  +  +            K        +G   +   ++  E  
Sbjct: 68  ILVATWHAMINDKLGGDLEKIKL----------AGKYALEVLEGFGVDMSKLKVVYAEDL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           + +I Y  L+ ++    S+ RM    ++  R   E  L   +  Y  +Q  D        
Sbjct: 118 VENIDYWSLVVKVAKNTSLARMKRALTIMGRRSEEAELDTSKLIYPAMQVSDIF----FQ 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           D  + +GG+DQ    +   D+ E+L+  K+ A+ +PLL        G        L +  
Sbjct: 174 DLDIALGGTDQRKAHMLARDVAEKLQRKKVIAIHTPLLVG----LQGGQRMNTEGLEE-- 227

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
               ++    +        +     +   +    + +      +N+   +   +      
Sbjct: 228 ---DDYLATIKMSKSKPETAIFIHDSPELVESKLKNSYCPKGVVNDNPVLQINKYIIFGE 284

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA-------TS 364
                +                + +  I I        + L T               +S
Sbjct: 285 QGVTLKIERDTKYGGDIEIKSYEELERIFIEGKLHPLDLKLATARKLNDILDPIRKRISS 344

Query: 365 TNEARRHLKS 374
            ++    + S
Sbjct: 345 KSQFVDLISS 354


>gi|294496409|ref|YP_003542902.1| tyrosyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667408|gb|ADE37257.1| tyrosyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 317

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 23/261 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L +R     ++  +ELD L       +AY GY+ +   +H GH+  +  L  LQK G  
Sbjct: 5   DLVKRNAQEIVT-EKELDELMEAKAEPSAYTGYEPSGK-IHMGHVLTVNKLIDLQKAGFN 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +          +    +E+++  +  +  F   +  G        +   
Sbjct: 63  ITVLLADVHAFLN---------QKGTMEEVKQIADYNRRCF---LALGLDPDKTNFVYGS 110

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +    +Y+  + ++    S+NR     + V   +   +     +  Y I+QA D   L 
Sbjct: 111 DFQMGEEYMLNVLKLTCTTSLNRARRSMDEVGRTMDDPR---VSQMVYPIMQAIDIAML- 166

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              D  + +GG DQ    +   +    +       L +P+L    G KM  +    I ++
Sbjct: 167 ---DVDVAVGGIDQRKIHMLAREGLPGMGYRAPICLHTPILLGLDGEKMASSRGNYISVD 223

Query: 249 KEMTSPYNFWQYWRNIDDADV 269
            +        +         V
Sbjct: 224 DDEAVIKKKMKKAFCPAGEIV 244


>gi|320101417|ref|YP_004177009.1| tyrosyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753769|gb|ADV65527.1| tyrosyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 361

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 17/271 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  +  ++      +   +     YIG++ +   +H G L  +  +  L K G    
Sbjct: 9   LAARNTVEVVTVEELRKVFEEKPRPRGYIGFEPSGL-VHVGWLVWMFKVRDLVKAGVDFH 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D    D       ++  +  ++ I          G  ++    ++ E  
Sbjct: 68  ILEATWHAYINDKLGGDMELIRKAARYTRIVLDAI----------GVPESSVKYIDAEEL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                Y   L       S+ R+    ++  R   E    F +  Y ++Q  D   L    
Sbjct: 118 ASDKDYWATLLRAAKHTSLARVRRALTIMGRRMDEGETDFSKLIYPLMQVTDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS--GTKMGKTLSGAIWLNK 249
           D  + +GG DQ    +   D+ ERL   K  A+ +P++T     G +MG      +  + 
Sbjct: 174 DLDIALGGMDQRKAHMLTRDIAERLGRRKPVAIHTPIITGLQGPGERMGGGEYDEVAASV 233

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
           +M+        + +     V +   +    P
Sbjct: 234 KMSKSKPETAVFVHDSPEAVEAKILKAYCPP 264


>gi|93278672|pdb|2AG6|A Chain A, Crystal Structure Of P-Bromo-L-Phenylalanine-Trna
           Sythetase In Complex With P-Bromo-L-Phenylalanine
          Length = 314

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 100/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +      DE R++                  +   +      A  +   +
Sbjct: 63  IILLADLHAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSS 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   +  +    ++ R     S+    + +++    E  Y I+Q          
Sbjct: 108 FQLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNPLHY---- 161

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 162 EGVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|93278581|pdb|1ZH0|A Chain A, Crystal Structure Of L-3-(2-Napthyl)alanine-Trna
           Synthetasein Complex With L-3-(2-Napthyl)alanine
          Length = 314

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 100/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +      DE R++                  +   +      A  +   +
Sbjct: 63  IILLADLHAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSS 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   +  +    ++ R     S+    + +++    E  Y I+Q          
Sbjct: 108 FQLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNPAHYQ--- 162

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 163 -GVDVVVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|34765046|ref|ZP_00145341.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27885617|gb|EAA23062.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 148

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 69/152 (45%), Positives = 92/152 (60%), Gaps = 4/152 (2%)

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            I  N+E IK     FI +      A++ NN  WL ++ YI+ LR++G  FSVNRML+ E
Sbjct: 1   MIDHNVECIKKQMQKFIDFSDD--KAILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAE 58

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +SR+  E  LSFLEFNYMI+QAYDF  L   Y+C +Q+GG DQW N+I G++L  R  
Sbjct: 59  CYKSRM--ENGLSFLEFNYMIMQAYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKD 116

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
               +A+T  LLT + G KMG T  GA  +  
Sbjct: 117 RKSAYAMTCTLLTNSEGKKMGPTAKGAYVVRP 148


>gi|67463836|pdb|1U7X|A Chain A, Crystal Structure Of A Mutant M. Jannashii Tyrosyl-Trna
           Synthetase Specific For O-Methyl-Tyrosine
 gi|67463837|pdb|1U7X|B Chain B, Crystal Structure Of A Mutant M. Jannashii Tyrosyl-Trna
           Synthetase Specific For O-Methyl-Tyrosine
          Length = 312

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 100/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSAQIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +      DE R++                  +   +      A  +   T
Sbjct: 63  IILLADLHAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGST 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   +  +    ++ R     S+    + +++    E  Y I+Q          
Sbjct: 108 FQLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNAIHYP--- 162

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 163 -GVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|297185015|gb|ADI21124.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB750_07C09]
          Length = 70

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 31/65 (47%)

Query: 46  ASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK 105
           A  LH GH   +  +   Q  GH  I L+G  T++IGDPS R+ +R  +   EI  N   
Sbjct: 5   APDLHLGHTVVINKMRQFQNFGHNVIFLIGDFTALIGDPSGRNVTRPPLTRDEIDANANT 64

Query: 106 IKGIF 110
            K   
Sbjct: 65  YKEQV 69


>gi|149241961|pdb|2HGZ|A Chain A, Crystal Structure Of A P-Benzoyl-L-Phenylalanyl-Trna
           Synthetase
          Length = 306

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 99/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 4   EMIKRNTSEIIS-EEELREVLKKDEKSAGIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 61

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +      DE R++                  +   +      A  +    
Sbjct: 62  IILLADLHAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSP 106

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   +  +    ++ R     S+    + +++    E  Y I+Q          
Sbjct: 107 FQLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNTS----HR 160

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 161 LGVDVAVGGMEQRKIHMLARELL----PKKVVMIHNPVLTGLDGEGKMSSSKGNFIAVDD 216

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 217 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 276

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 277 KNKELHPMDLKNAVAEELI 295


>gi|289580760|ref|YP_003479226.1| tyrosyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530313|gb|ADD04664.1| tyrosyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 326

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 90/255 (35%), Gaps = 22/255 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     +++    ++        AY+GY+ +   LH GHL     L  LQ  G + 
Sbjct: 5   DLITRNAEEVVTDEEVRELADEPDGTRAYVGYEPSG-VLHLGHLLTANKLIDLQDAGMEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +     +         +EI+E  E++K  F   I YG  + +   +    
Sbjct: 64  VVLLADVHAYLN---GKG------TFEEIRETAEQMKAQF---IAYGLDEDNTEFVYGSE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +    +Y   L E+    ++NR        + ++  ++       Y ++Q  D   L   
Sbjct: 112 FQLDEEYTLDLHELELATTLNRAQRA---MAEIQGGETAKVSHVVYPLMQTLDIEYL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLN 248
            D  L +GG DQ    +   +    L      AL +P++   T+   KM  +    I + 
Sbjct: 166 -DLDLAVGGLDQRKVHMLAREELPELGYDVRPALHTPIIADLTSGEGKMSSSEGVTISME 224

Query: 249 KEMTSPYNFWQYWRN 263
                          
Sbjct: 225 DSTEELEEKVNSAFC 239


>gi|148642573|ref|YP_001273086.1| tyrosyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222445932|ref|ZP_03608447.1| hypothetical protein METSMIALI_01580 [Methanobrevibacter smithii
           DSM 2375]
 gi|189083659|sp|A5UKJ0|SYY_METS3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148551590|gb|ABQ86718.1| tyrosyl-tRNA synthetase, TyrS [Methanobrevibacter smithii ATCC
           35061]
 gi|222435497|gb|EEE42662.1| hypothetical protein METSMIALI_01580 [Methanobrevibacter smithii
           DSM 2375]
          Length = 319

 Score =  104 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 84/240 (35%), Gaps = 22/240 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L E+G +  I +  EL  +  +    AY GY+ +   +H GH   +  L  LQK G K 
Sbjct: 8   QLIEKGTLEVI-DTEELKEVLKKEQPIAYTGYEPSGK-IHLGHAVTVQKLKTLQKLGFKI 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +     +           I+E  E  +     F   G  +T   +L +  
Sbjct: 66  KILLADFHAFLN---GKGS---------IEEIAETAEYNMKCFKALGLDETTEFILGSSF 113

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            L       + +            S + V    +  +  S     Y I+Q  D V L   
Sbjct: 114 QLNEDYASKVYKLATLTTLKRARRSMDQVSRHDENPKVASV---VYPIMQTVDMVAL--- 167

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            D  + +GG +Q    +   +  E++       + +PLL       KM  +    I ++ 
Sbjct: 168 -DVDVALGGMEQRKIQMLARENLEKIDEKVPVCIHTPLLHGLDGDAKMSSSKGNYIAVDD 226


>gi|288869553|ref|ZP_06409463.1| tyrosine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288861893|gb|EFC94191.1| tyrosine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 322

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 84/240 (35%), Gaps = 22/240 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L E+G +  I +  EL  +  +    AY GY+ +   +H GH   +  L  LQK G K 
Sbjct: 11  QLIEKGTLEVI-DTEELKEVLKKEQPIAYTGYEPSGK-IHLGHAVTVQKLKTLQKLGFKI 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +     +           I+E  E  +     F   G  +T   +L +  
Sbjct: 69  KILLADFHAFLN---GKGS---------IEEIAETAEYNMKCFKALGLDETTEFILGSSF 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            L       + +            S + V    +  +  S     Y I+Q  D V L   
Sbjct: 117 QLNEDYASKVYKLATLTTLKRARRSMDQVSRHDENPKVASV---VYPIMQTVDMVAL--- 170

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNK 249
            D  + +GG +Q    +   +  E++       + +PLL       KM  +    I ++ 
Sbjct: 171 -DVDVALGGMEQRKIQMLARENLEKIDEKVPVCIHTPLLHGLDGDAKMSSSKGNYIAVDD 229


>gi|189096270|pdb|3D6U|A Chain A, Crystal Structure Of 4-(Trifluoromethyldiazirinyl)
           Phenylalanyl-Trna Synthetase
 gi|189096271|pdb|3D6V|A Chain A, Crystal Structure Of 4-(Trifluoromethyldiazirinyl)
           Phenylalanyl-Trna Synthetase
          Length = 314

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 101/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSAIIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    + +      DE R++                  +   +      A  +   +
Sbjct: 63  IILLADLFAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSS 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           ++    Y   +  +    ++ R     S+    + +++    E  Y I+Q          
Sbjct: 108 FMLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNPLHY---- 161

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 162 EGVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|297170505|gb|ADI21534.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_25G02]
          Length = 200

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 13/183 (7%)

Query: 218 TPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
             +   +T P+L  T    KM K+L+  I L +   S  + +    +I D  +  +   L
Sbjct: 1   MEEQIIMTLPILEGTDGVKKMSKSLNNYIGLKE---SSNDMFGKIMSISDDLMWRYFDLL 57

Query: 277 TTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           +     EI  + K   + +N  EAKK+++ EI T  HG E+A  A       F       
Sbjct: 58  SFKSSVEIKELKKKTEQGLNPMEAKKMLSAEIVTRFHGEEKALLAEKEFTNRFSKGHDPA 117

Query: 335 HMPTISISKDEVSRGMGLLTLIV-----KAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            +  I +S       + +L L+      +     S +EARR +   A+KI+   IS+E +
Sbjct: 118 EIKLIKLSMKT--SSISILDLLSSEELGEHKLCKSKSEARRMIAQGAVKIDGKKISDEAI 175

Query: 390 QIK 392
            ++
Sbjct: 176 SVQ 178


>gi|296242960|ref|YP_003650447.1| tyrosyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095544|gb|ADG91495.1| tyrosyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 362

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 91/276 (32%), Gaps = 17/276 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R     ++      +   +     Y+G++ +   +H G L  +  +  L + G    
Sbjct: 9   LAIRNTSEVVTVEELRKVFEEKEKPRGYLGFEPSGL-VHVGWLVWMFKVRDLVEAGVDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D            ++  +  ++ I          G  +     ++ E  
Sbjct: 68  LLEATWHAYINDKLGGSLELIRKAARYTRIVLDAI----------GVPEGRVKYVDAEEL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                Y  LL       S+ R+    ++  R   E    F +  Y ++Q  D   L    
Sbjct: 118 ASDKDYWGLLLRAAKQVSLARVKRALTIMGRRVDEGETDFSKLIYPLMQVTDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSGAIWLNK 249
           D  + +GG+DQ    +   D+ E+L   K  A+ +P++T   G   +MG          +
Sbjct: 174 DLDIAVGGTDQRKAHMLTRDIAEKLGLKKPVAIHTPIITGLQGPGGRMGAGAEIDEIAAE 233

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
              S           ++A+ V         P    +
Sbjct: 234 AKMSKSKPETAIFVHEEAEAVEAKIMKAYCPPRITE 269


>gi|295091149|emb|CBK77256.1| Tyrosyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 130

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 3/131 (2%)

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
           M + +G ++N+AK+I+A E+T +VHG EEA KA  A+   F    ++ +MPT  + +++ 
Sbjct: 1   MDQWEGSQLNKAKEILAYELTALVHGEEEAVKAQEASRALFTSG-NAANMPTAKLKEEDF 59

Query: 347 SRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G + +L+++ K+G A S +EARR+++   + ++   + + K           G + + 
Sbjct: 60  ADGSIDILSILQKSGLAPSRSEARRNVEQGGVSVDGVQVKDIKAAFTKDQLSGEG-VVVK 118

Query: 406 FGKKNHIICHL 416
            GKKN     L
Sbjct: 119 RGKKNFKRVVL 129


>gi|146304899|ref|YP_001192215.1| tyrosyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703149|gb|ABP96291.1| tyrosyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 352

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 113/360 (31%), Gaps = 26/360 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           +  R     ++     + L S   +  Y+G++ +    H G L     +  L + G    
Sbjct: 1   MITRNTAEVVTPEELKEALESGRKLKGYLGFEPSGL-FHIGWLIWAQKVKDLLQAGVDMS 59

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + I D    +                      +    +G  ++   +++ E  
Sbjct: 60  LLVATWHAWINDKLGGNME----------MIKLAGDYAITVLDSFGISRSKVHVIDAEDM 109

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y  L+  +    S+ RM    ++  R   E  L   +  Y  +Q  D   +    
Sbjct: 110 VKDKDYWSLVIRVAKNTSLARMKRALTIMGRKADEAELDSSKLIYPAMQVSDIFYM---- 165

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAIWLNKE 250
           D  + +GG+DQ    +   D+ E+L   K+ A+ +PLL     G +M   +     L   
Sbjct: 166 DLDIALGGTDQRKAHMLARDVAEKLGKKKVIAIHTPLLVGLQGGQRMNPGVDEDDALADI 225

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI---IATEIT 307
             S           D+ + V         P   ++    LQ  +    +     +  E  
Sbjct: 226 KMSKSKPETAIFINDEPEEVEGKLMTAYCPKGVVENNPVLQINKYILFQVDDRGLKVERD 285

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
               G  +            +  +H + +   +  K        ++  + K+    S  E
Sbjct: 286 AKFGGDVQFNTYEELEKAYAEGKLHPKDLKVATARKLN-----QIIDPLRKS--IKSRPE 338


>gi|218884548|ref|YP_002428930.1| tyrosyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766164|gb|ACL11563.1| tyrosyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 361

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  +  I+      I   +     Y+G++ +   +H G L  +  +  L   G    
Sbjct: 9   LATRNVLEVITIEELRKIFEDKERPKGYLGFEPSGL-VHVGWLVWMFKVRDLVNAGVDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D    D          I++     + I  +    G  +T    ++ E  
Sbjct: 68  ILEATWHAYINDKLGGDIE-------MIRKAARYTRIILDAI---GVPETRIKYVDAEEL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               +Y  LL +     S+ R+    ++  R   E    F +  Y ++Q  D   L    
Sbjct: 118 ASDKEYWGLLLKAAKHSSLARVKRALTIMGRKMDEGETDFSKLIYPLMQVTDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           D  + +GG DQ    +   D+ E+L   K  AL +P++T   G
Sbjct: 174 DLDIALGGMDQRKAHMLTRDIAEKLGRRKPVALHTPIITGLQG 216


>gi|99035959|ref|ZP_01315004.1| hypothetical protein Wendoof_01000165 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 111

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 54/110 (49%)

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T +   ++  + A  A      +  S  +P   I K++V+ G+ L+ L+   GF  S  
Sbjct: 1   MTKICHGDKEAELAQFAAISAFENEDSSLLPDYIIKKEQVASGISLVDLLHDTGFEPSKG 60

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A+R ++ N  KIN+++++N    I  + F     IKLS GKK HI   +
Sbjct: 61  AAKRLIQGNGCKINDNVVNNIDHVINFESFKDQPFIKLSAGKKRHIKVVV 110


>gi|284165941|ref|YP_003404220.1| tyrosyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015596|gb|ADB61547.1| tyrosyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 331

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 91/255 (35%), Gaps = 22/255 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     +++    ++        AY+GY+ +   LH GHL     L  LQ+ G + 
Sbjct: 5   DLITRNAEEVVTDEEVRELADDPDGKRAYVGYEPSG-VLHLGHLLTANKLIDLQEAGMEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +     +         +EI+E  E++K  F   I YG  +     +    
Sbjct: 64  VVLLADVHAYLN---GKG------TFEEIRETAERMKAQF---IAYGLDEESTEFVYGSE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +    +Y   L E+    ++NR        + ++ +++       Y ++Q  D   L   
Sbjct: 112 FQLDEEYTLDLHELELSTTMNRAQRA---MAEIQGDETAKVSHLVYPLMQTLDIEYL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLN 248
            D  L +GG DQ    +   +    +      AL +P++   T+   KM  +    I + 
Sbjct: 166 -DLDLAVGGLDQRKVHMLAREKLPEVDYEVRPALHTPIVADLTSGEGKMSSSEGITISME 224

Query: 249 KEMTSPYNFWQYWRN 263
                          
Sbjct: 225 DSTEDLEEKVNSAYC 239


>gi|297620225|ref|YP_003708330.1| tyrosyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379202|gb|ADI37357.1| tyrosyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 321

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 88/239 (36%), Gaps = 27/239 (11%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L +R  +  I    +L  +     ++    AYIG++ +   +H GH  Q+  +  L K 
Sbjct: 8   ELIKRNTVE-IIGEDDLKEMLSDETNKREKIAYIGFEPSGK-IHMGHYLQIRKMMDLHKA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + L+    + +          +    ++I +  E  K +F +         +A  +
Sbjct: 66  GFKVVILLADFHAYLN---------QKGTLEDIGKLGEYNKSVFEAM------GLEAEYI 110

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               +    KY + + ++    ++ R      V +R          E  Y ++QA D   
Sbjct: 111 YGSEYQLGAKYTEDVYKLALRTTLKRARRSMEVIAREDDNP--KVAEVVYPLMQANDIKH 168

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L    +  + +GG +Q    +   +L   +       L +P+L+   G     +  G +
Sbjct: 169 L----NVAVAVGGMEQRKIHVLARELLPNMDFESPICLHNPVLSGLDGVGKMSSSKGNL 223


>gi|288559845|ref|YP_003423331.1| tyrosyl-tRNA synthetase TyrS [Methanobrevibacter ruminantium M1]
 gi|288542555|gb|ADC46439.1| tyrosyl-tRNA synthetase TyrS [Methanobrevibacter ruminantium M1]
          Length = 321

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 24/259 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L + G +  I    EL     +    AY GY+ +   +H GH   +M L  LQK G K 
Sbjct: 8   ELIQEGTLE-IIELEELKQKLEKETPIAYTGYEPSGK-IHLGHAVTIMKLKQLQKLGFKI 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +     +          EI E  E  K  F           D   +   +
Sbjct: 66  KILLADYHAFLN---GKGTVE------EIAETAEYNKRCFQGLGLAD----DTEYILGSS 112

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +    +Y + + ++ +  ++ R     + V       +  S     Y ++Q  D   L  
Sbjct: 113 FQTGSEYTNDVYQLATITTLKRAKRSMDQVSRHDDNPKVASV---VYPLMQTADMSAL-- 167

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLN 248
             +  + +GG +Q    +   +   R+       + +PL+       KM  +    I ++
Sbjct: 168 --NVDIALGGMEQRKIQMLARENLPRIGKEAPVCIHTPLIHGLDGDDKMSSSKGNYIAVD 225

Query: 249 KEMTSPYNFWQYWRNIDDA 267
            +  +     +        
Sbjct: 226 DDEKTIKEKIRKSYCPQGE 244


>gi|222480911|ref|YP_002567148.1| tyrosyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|254783608|sp|B9LTA6|SYY_HALLT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222453813|gb|ACM58078.1| tyrosyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 328

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 83/239 (34%), Gaps = 22/239 (9%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             R     ++      +        AY+GY+ +   LH GH+     L  LQ+ G +   
Sbjct: 7   ITRNAAEVVTEEEIEAMADDPDGKRAYVGYEPSG-VLHIGHMLTANKLIDLQEAGFEVTV 65

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+    + + D             +EI+   E+++  F   I YG  +++   +    + 
Sbjct: 66  LLADVHAYLNDKG---------SFEEIRHTAERMRDQF---IAYGLDESNTQFVLGSDFQ 113

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               Y   L  +    ++ R        + +    S+   +  Y ++QA D   L     
Sbjct: 114 LDDDYTLDLHSLELETTLARAERA---MAEITSGDSVKVSQAVYPLMQALDIPYL----G 166

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLNK 249
             L +GG +Q    +   D+   +      +L +PL+        KM  +    I +  
Sbjct: 167 VDLAVGGMEQRKVHMLARDVLPSIDREPPTSLHTPLIADLGTGRGKMSSSEGVTISMED 225


>gi|167013270|pdb|2PXH|A Chain A, Crystal Structure Of A Bipyridylalanyl-Trna Synthetase
          Length = 314

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 99/319 (31%), Gaps = 49/319 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R     IS   EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   
Sbjct: 5   EMIKRNTSEIIS-EEELREVLKKDEKSAGIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDI 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I  +    + +      DE R++                  +   +      A  +    
Sbjct: 63  IIYLADLAAYLNQKGELDEIRKIGD---------------YNKKVFEAMGLKAKYVYGSE 107

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   +  +    ++ R     S+    + +++    E  Y I++   +      
Sbjct: 108 FQLDKDYTLNVYRLALKTTLKRA--RRSMELIAREDENPKVAEVIYPIMEVNGWHY---- 161

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++ 
Sbjct: 162 SGVDVAVGGMEQRKIHMLARELL----PKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDD 217

Query: 250 EMTSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMA 288
                    +                         +       F   LT     E++ + 
Sbjct: 218 SPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLF 277

Query: 289 KLQGKEINEAKKIIATEIT 307
           K +     + K  +A E+ 
Sbjct: 278 KNKELHPMDLKNAVAEELI 296


>gi|292654317|ref|YP_003534214.1| tyrosyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370444|gb|ADE02671.1| tyrosyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 328

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 22/266 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++      +        AY+GY+ +   LH GH+     L  LQ  G + 
Sbjct: 5   DLITRNASEVVTEDEVRALADDPEGKRAYVGYEPSG-VLHIGHMLTANKLIDLQAAGFEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +     +         +EI+E  E++K  F   I YG  ++    +    
Sbjct: 64  VVLLADVHAYLN---GKG------TFEEIRETAERMKAQF---IAYGLDESQTEFVLGSE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y+  L  +    +++R        + +K    ++  +  Y I+QA D V L   
Sbjct: 112 YQLDESYVLDLHAVELETTLSRAERA---MAEIKSGDGVTVAQAVYPIMQALDIVYL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLN 248
            D  L +GG +Q    +   D    +       + +PL+        KM  +    I + 
Sbjct: 166 -DVDLAIGGMEQRKVHMLARDTLPSIGEESPTCMHTPLIADLGTGIGKMSSSEGVTISME 224

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAK 274
                  +          AD     +
Sbjct: 225 DSTEDIEDKVNGAFCPPTADPEPTDE 250


>gi|150400018|ref|YP_001323785.1| tyrosyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166225537|sp|A6URQ1|SYY_METVS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|150012721|gb|ABR55173.1| tyrosyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 319

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 100/277 (36%), Gaps = 28/277 (10%)

Query: 19  HQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            +I +  E++ L  + G   AYIG++ +   +H GH  Q+  +  LQK G K I L+   
Sbjct: 20  SEIVSIEEMNELLKKEGEKIAYIGFEPSGK-IHLGHYLQIKKMIDLQKAGFKIIILLADL 78

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
            + +          +    +EI+   E+ K  F S          A  +    +  + +Y
Sbjct: 79  HAYLN---------QKGTMEEIRALGEENKKAFESMGLI------ADYVYGSEFQLNEEY 123

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
              + ++    ++NR      V +R             Y ++Q  D   L    +  + +
Sbjct: 124 TIDVYKLALATTLNRAKRSMEVIAREDENP--KVASVVYPLMQVNDIKHL----NVDVAV 177

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +  +  N
Sbjct: 178 GGMEQRKIHMLSREILPNMGYKAPICIHNPILTGLDGEGKMSSSKGNLIAVDDDEVTIKN 237

Query: 257 FWQYWRNIDDA----DVVSFAKRLTTLPMSEIDRMAK 289
             +             V+  A+     P++       
Sbjct: 238 KLKNAFCPMKEVFGNPVLEIARYYLDYPVNINRPEKY 274


>gi|227831059|ref|YP_002832839.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579940|ref|YP_002838339.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229585531|ref|YP_002844033.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|284998554|ref|YP_003420322.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|259517032|sp|C3N048|SYY_SULIA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259517038|sp|C3MJP1|SYY_SULIL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259517048|sp|C3N8R2|SYY_SULIY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|227457507|gb|ACP36194.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010655|gb|ACP46417.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228020581|gb|ACP55988.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|284446450|gb|ADB87952.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 361

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 83/234 (35%), Gaps = 16/234 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     I+       L S+  +  YIG++ +    H G L     +  L + G   
Sbjct: 8   QLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGL-FHIGWLIWTQKVKDLVEAGVNM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + I D    D S   M +                   YG   T   +++ + 
Sbjct: 67  TLLRATWHAWINDKLGGDLSLIKMAADYT----------VEVIKNYGVDTTKLNIVDADD 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L   
Sbjct: 117 MVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSG 243
            D  + +GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T   
Sbjct: 174 -DLDIALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGM 226


>gi|227828301|ref|YP_002830081.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|238620493|ref|YP_002915319.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259517035|sp|C4KJ87|SYY_SULIK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259517041|sp|C3MYZ9|SYY_SULIM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|227460097|gb|ACP38783.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|238381563|gb|ACR42651.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|323475371|gb|ADX85977.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323478096|gb|ADX83334.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 361

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 83/234 (35%), Gaps = 16/234 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     I+       L S+  +  YIG++ +    H G L     +  L + G   
Sbjct: 8   QLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGL-FHIGWLIWTQKVKDLVEAGVNM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + I D    D S   M +                   YG   T   +++ + 
Sbjct: 67  TLLRATWHAWINDKLGGDLSLIKMAADYT----------VEVIKNYGVDTTKLNIVDADD 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L   
Sbjct: 117 MVKEKDYWALVIKVAKNSSLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSG 243
            D  + +GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T   
Sbjct: 174 -DLDIALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGM 226


>gi|290558914|gb|EFD92302.1| tyrosyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
 gi|326422572|gb|EGD71967.1| Tyrosyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5_'5-way FS']
          Length = 344

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 96/254 (37%), Gaps = 21/254 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R  +  I+     +++ +   +TAYIG   T  S+H GHL  L  LF  +K G   
Sbjct: 13  DLIKRNTLEVITLKDLEELISTGKPLTAYIGRAPTG-SIHLGHLIALGKLFDFEKAGIHT 71

Query: 71  ISLMGGGTSIIGD-PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
             L+    + + D  S            E+ + ++  K        +         +   
Sbjct: 72  KILIADIHAALDDLKSG---------WDELDKRVDYTKKCIELAFDWERLPE---FVRGS 119

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            +  S  Y+  + ++ +  +V R L   S  +R+K        E  Y I+QA D   L  
Sbjct: 120 DFELSRSYVTDVLKLSTLTTVERALHSASEVTRMKNP---KVSELIYPIMQALDEEYL-- 174

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             D  +Q+GG DQ        +  E+L   K   + +PL+++  G     + S      K
Sbjct: 175 --DADIQLGGMDQRHIFGYAREYLEKLGYKKRVEIMTPLVSSIKGPGTKMSSSVPESNIK 232

Query: 250 EMTSPYNFWQYWRN 263
              S  +  +   N
Sbjct: 233 IYDSEESLKRKIMN 246


>gi|56808834|ref|ZP_00366547.1| COG0162: Tyrosyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 64

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 35/63 (55%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
          +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ+ 
Sbjct: 2  NIFEELKTRGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQRA 61

Query: 67 GHK 69
          GHK
Sbjct: 62 GHK 64


>gi|332796353|ref|YP_004457853.1| tyrosyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694088|gb|AEE93555.1| tyrosyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 344

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 105/322 (32%), Gaps = 17/322 (5%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
               ++       L +   +T YIG++ +    H G L     +  L   G     LM  
Sbjct: 1   MEEIVTLDDLKKKLENNEKLTGYIGFEPSGL-FHIGWLIWAQKVKDLSNAGVSMTLLMAT 59

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + I D    D     +            K        YG   +   +++ E  +    
Sbjct: 60  WHAWINDKLNGDMELIKL----------AGKYAIDVLSAYGLDMSKINVVDAEDIVKDKA 109

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           Y +L+ ++    ++ RM    ++  R   E  L   +  Y  +Q  D   L    D  + 
Sbjct: 110 YWELVLKVAKNTTLARMKRALTIMGRKSDEAELDTSKLFYPAMQVSDIFYL----DVDIA 165

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPY 255
           +GG+DQ    +   ++ E+    K+ A+ +PLL     G +MG      +    +M+   
Sbjct: 166 LGGTDQRKAHMLAREIAEKFHRKKVIAIHTPLLVGLKGGQRMGNVEEDDLLSEIKMSKSK 225

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
                + N    +V +   R        E++ + ++    I      +  E      G  
Sbjct: 226 PENAIFINDSPEEVTAKIMRAYCPSRVVELNPILQINRYIIFTNVNKLKVERDIKYGGDI 285

Query: 315 EAEKAATAAMECFDMSIHSQHM 336
           E            +  +H   +
Sbjct: 286 EFNNYEELEKAFAEGKLHPMDL 307


>gi|229581399|ref|YP_002839798.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|259517044|sp|C3NMQ6|SYY_SULIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|228012115|gb|ACP47876.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 361

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 83/234 (35%), Gaps = 16/234 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     I+       + S+  +  YIG++ +    H G L     +  L + G   
Sbjct: 8   QLITRNAAEIITIDELRKKIESEEKLKGYIGFEPSGL-FHIGWLIWTQKVKDLVEAGVNM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + I D    D S   M +                   YG   T   +++ + 
Sbjct: 67  TLLRATWHAWINDKLGGDLSLIKMAADYT----------VEVIKNYGVDTTKLNIVDADD 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L   
Sbjct: 117 MVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSG 243
            D  + +GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T   
Sbjct: 174 -DLDIALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGM 226


>gi|269986421|gb|EEZ92708.1| tyrosyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 343

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +R  +  I+      +L     ++ YIG   T  S+H GHL  L  LF  ++ G   
Sbjct: 12  DIIKRNTLEIITLEDLRSLLNEGKPLSVYIGRAPTG-SIHLGHLVALGKLFDFERAGIHS 70

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + + D   +          E+ + ++  K        +         +    
Sbjct: 71  KILIADLHAALDDLKSK--------WDELDKRVDYTKKCIELSFDWERVPE---FVRGSD 119

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  S  Y+  L ++ +  +  +     S  +R+K        E  Y ++Q  D   L   
Sbjct: 120 FELSQPYVSDLLKLSTLTTAEKATHAASEVTRMKNP---KVSELIYPLMQTLDEEYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
            D  +Q+GG DQ        +  ++L   K   + +PL+
Sbjct: 174 -DVDIQLGGMDQRHIFAYAREYLQKLGYRKRVEVLTPLI 211


>gi|284173388|ref|ZP_06387357.1| tyrosyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261601698|gb|ACX91301.1| tyrosyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 361

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 16/234 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     I+       L S   +  YIG++ +    H G L     +  L + G   
Sbjct: 8   QLIMRNTAEVITIDELRKKLESDEKLKGYIGFEPSGL-FHIGWLIWTQKVKDLVEAGINM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + I D    D +   M +                   YG       +++ + 
Sbjct: 67  TLLRATWHAWINDKLGGDMNLIKMAADYA----------VEVIKNYGVDVGKLNIVDADD 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L   
Sbjct: 117 IVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSG 243
            D  + +GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T   
Sbjct: 174 -DLDIALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMNITEGM 226


>gi|143468|gb|AAA22718.1| transfer RNA-Tyr synthetase [Bacillus subtilis]
          Length = 95

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            D+ +  + +P++ +   +    + L+ ++V++  + S  +AR  +++ A+ IN    + 
Sbjct: 8   QDVKVGFKDVPSMEVDSTQ---ELSLVDVLVQSKLSPSKRQAREDIQNGAVYINGERQTE 64

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               +  +D        L  GKK + +  
Sbjct: 65  INYTLSGEDRIENQFTVLRRGKKKYFLVT 93


>gi|15897044|ref|NP_341649.1| tyrosyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|2501078|sp|P95982|SYY_SULSO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1707816|emb|CAA69524.1| tyrosyl tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813211|gb|AAK40439.1| Tyrosyl-tRNA synthetase (tyrS) [Sulfolobus solfataricus P2]
          Length = 366

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 16/234 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     I+       L S   +  YIG++ +    H G L     +  L + G   
Sbjct: 13  QLIMRNTAEVITIDELRKKLESDEKLKGYIGFEPSGL-FHIGWLIWTQKVKDLVEAGINM 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + I D    D +   M +                   YG       +++ + 
Sbjct: 72  TLLRAAWHAWINDKLGGDMNLIKMAADYA----------VEVIKNYGVDVGKLNIVDADD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L   
Sbjct: 122 IVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL--- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSG 243
            D  + +GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T   
Sbjct: 179 -DLDIALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMNITEGM 231


>gi|325958284|ref|YP_004289750.1| tyrosyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329716|gb|ADZ08778.1| Tyrosyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 322

 Score = 98.7 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 31/264 (11%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K+         G +  I+   EL     +    AYIGY+ +  ++H GH   +  +
Sbjct: 7   MENIKN---------GTLEVIT-EEELKDKLQEDKPVAYIGYEPSG-NIHLGHAITVKKM 55

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK G     L+    + +     +     +   +  + N+   +             
Sbjct: 56  IEIQKAGFHVKILLADLHAYLN---GKGTLEEI--EEISKYNMRCFRA--------LGLS 102

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                +   ++     Y   + E+    ++ R     S+    +        E  Y I+Q
Sbjct: 103 EKTEFVLGSSYQTREDYTYKVYELALSTTLTRA--KRSMAQITRDSADHKVAEVIYPIMQ 160

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGK 239
             D + L       L +GG +Q    +   +   ++       + +PLL  T    KM  
Sbjct: 161 VLDMIFLK----VDLALGGMEQRKIHMLARESLPKMGYKAPVCIHTPLLHGTDGSDKMSS 216

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRN 263
           +    I ++ E        Q    
Sbjct: 217 SKQNYIAIDDEPEVIKKKIQKSYC 240


>gi|118431719|ref|NP_148365.2| tyrosyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|116063041|dbj|BAA81085.2| tyrosyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 361

 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 15/217 (6%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             R  +  ++      +L S   +  YIGY+ +  + H G L  +  +  L + G     
Sbjct: 10  IARNTVEIVTEEELKGLLASGARIKGYIGYEPSGVA-HIGWLVWMYKVKDLVEAGVDFSV 68

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L     + I D    D       ++ ++  +E            G        ++ E   
Sbjct: 69  LEATWHAYINDKLGGDMDLIRAAARIVRRVMEAA----------GVPVERVRFVDAEELA 118

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               Y  L+  +    S+ R+    ++  R   E  +   +  Y ++Q  D   +    D
Sbjct: 119 SDKDYWGLVIRVAKRASLARVRRALTIMGRRAEEAEVDASKLIYPLMQVSDIFYM----D 174

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
             + +GG DQ    +   D+ E+L   K  A+ +P++
Sbjct: 175 LDIALGGMDQRKAHMLARDVAEKLGRKKPVAIHTPII 211


>gi|74577141|sp|Q9YA64|SYY_AERPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83754903|pdb|2CYA|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase From
           Aeropyrum Pernix
          Length = 364

 Score = 98.7 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 15/217 (6%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             R  +  ++      +L S   +  YIGY+ +  + H G L  +  +  L + G     
Sbjct: 13  IARNTVEIVTEEELKGLLASGARIKGYIGYEPSGVA-HIGWLVWMYKVKDLVEAGVDFSV 71

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L     + I D    D       ++ ++  +E            G        ++ E   
Sbjct: 72  LEATWHAYINDKLGGDMDLIRAAARIVRRVMEAA----------GVPVERVRFVDAEELA 121

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               Y  L+  +    S+ R+    ++  R   E  +   +  Y ++Q  D   +    D
Sbjct: 122 SDKDYWGLVIRVAKRASLARVRRALTIMGRRAEEAEVDASKLIYPLMQVSDIFYM----D 177

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
             + +GG DQ    +   D+ E+L   K  A+ +P++
Sbjct: 178 LDIALGGMDQRKAHMLARDVAEKLGRKKPVAIHTPII 214


>gi|70953026|ref|XP_745641.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526028|emb|CAH76862.1| hypothetical protein PC000802.01.0 [Plasmodium chabaudi chabaudi]
          Length = 294

 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 50/242 (20%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQ 56
             KS+ L  L ER  I+  S+ + +D +       ++   + Y+G DL    LH G L  
Sbjct: 54  KIKSNALKKLYERKLINYTSDIKGIDKILYENEQENENKKSVYVGIDLNCKYLHIGSLIP 113

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L +L  L+      I L+G  T+ IGDPSF+   R+   ++EI +N + IK     +I  
Sbjct: 114 LTVLEILRNYKTDVIILLGNSTTKIGDPSFQTNERKQTLNEEIYQNEKSIKETIIDYILN 173

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFS--------------------------- 149
                          LC +    +  +     +                           
Sbjct: 174 NDNSNFNATDFPMRQLCGMNLNQMSFQDICKKTDLLSKDEIIYECNGKGSLRILKNNGWY 233

Query: 150 ----------------VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
                           ++++L  +SV  + + +  L+  + NY+ LQ+YDF+ L K Y  
Sbjct: 234 DKMSVIDFLKYGEHFGIHKLLRKDSVIKKYQNKN-LTLKDLNYISLQSYDFLYLYKKYKT 292

Query: 194 RL 195
            +
Sbjct: 293 YI 294


>gi|156186010|gb|ABU55323.1| tyrosyl-tRNA synthetase [Callosobruchus chinensis]
          Length = 126

 Score = 97.9 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 71/125 (56%), Positives = 97/125 (77%)

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
           GT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+++NN  WL +IK
Sbjct: 1   GTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMMSFNDSKTGAMIVNNADWLDNIK 60

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           YID L +IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDFVEL K + CRLQ
Sbjct: 61  YIDFLGDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDFVELNKKHGCRLQ 120

Query: 197 MGGSD 201
           +GGS+
Sbjct: 121 IGGSN 125


>gi|70938703|ref|XP_739992.1| tyrosine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56517390|emb|CAH79524.1| tyrosine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 254

 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 30/238 (12%)

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS-----GAIWLNKEMTSPYN 256
           QWGNI  GI+  + +   +L+ LT+ LL   +  K  K+L        IW+NKE T PY 
Sbjct: 1   QWGNIQSGIEFCQNIYNQQLYGLTTNLLLYKNNMKFSKSLFYENKKLPIWINKEYTPPYL 60

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG------------KEINEAKKIIAT 304
           FW + RN++D  V S+   LT L ++  + + K                 IN AKK +A 
Sbjct: 61  FWNFLRNVEDQKVQSYIDMLTNLNINLDEELKKSDHESSKNRNISSYDNIINSAKKQMAD 120

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQH-------MPTISISKDEVSRG-MGLLTLI 356
            IT  ++G+    K         +   +          +P   I+ + + +  + +  ++
Sbjct: 121 HITNTIYGKSVINKIHKINNIIKNNQFNEIENLQELKILPYNQININSIKQNEINITDVL 180

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG-----NIKLSFGKK 409
                A +  EA+  +  N I IN  +I++ K  + + DF  T         L  GKK
Sbjct: 181 KFFQIAMTNKEAKEKINQNCIYINTKLITDPKYVLTITDFLKTKDHNYYYALLRLGKK 238


>gi|20150424|pdb|1JH3|A Chain A, Solution Structure Of Tyrosyl-Trna Synthetase C-Terminal
           Domain
          Length = 107

 Score = 97.9 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           ++    + +P+      +V     L+ L+V AG + S  +AR  +++ AI +N   + + 
Sbjct: 14  EIEQGFKDVPSFVHEGGDV----PLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDV 69

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              +  +         +  GKK + +  
Sbjct: 70  GAILTAEHRLEGRFTVIRRGKKKYYLIR 97


>gi|11066479|gb|AAG28601.1|AF247185_1 tyrosyl tRNA synthetase [Rhizobium etli]
          Length = 64

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 47/64 (73%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  FKSDFL  L ERGFIHQ+S+   LD L ++ VVTAY+GYD TA+SLH G+L    +L
Sbjct: 1  MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKEVVTAYVGYDATATSLHIGNLISATML 60

Query: 61 FWLQ 64
          +WLQ
Sbjct: 61 YWLQ 64


>gi|289524532|ref|ZP_06441386.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502227|gb|EFD23391.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 65

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V  G   S +EARR ++S  + +N   +  E  ++   +F     + L  GKK + +
Sbjct: 2   DVLVHVGACASKSEARRLIRSGGVSLNGERVDEENYEVDSDNFLYGKYMLLKLGKKRYHL 61

Query: 414 CH 415
             
Sbjct: 62  VE 63


>gi|313124873|ref|YP_004035137.1| tyrosyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291238|gb|ADQ65698.1| tyrosyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 331

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 76/219 (34%), Gaps = 20/219 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++      +        AY+GY+ +   LH GH+     L  LQ+ G + 
Sbjct: 5   DLITRNAAEVVTEDEARSLADDPDGKRAYVGYEPSG-VLHIGHMLTANKLIELQEAGFEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + D                 E  E    +   F+ YG  +     +    
Sbjct: 64  VVLLADVHAYLND------------KGTFDEIQETATRMQEQFVAYGLEEDQTEFVLGSE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +     Y   L  +    S++R        + +K   +++  +  Y ++QA D V L   
Sbjct: 112 FQLDDDYTLDLHALELETSLSRAERA---MAEIKSGDTVTVAQAVYPLMQALDIVYL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
            D  L +GG +Q    +   D    +       L +PL+
Sbjct: 166 -DVDLAIGGMEQRKVHMLARDTLPSIDADAPTCLHTPLI 203


>gi|289676246|ref|ZP_06497136.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 191

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 74/197 (37%), Gaps = 15/197 (7%)

Query: 224 LTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
           +T PLL       KM K+L   + + +     Y+      +I D+ +  + + L+   M 
Sbjct: 1   MTMPLLEGLDGVKKMSKSLGNYVGIQEAPGIMYS---KLVSIPDSLMWRYFELLSFRSME 57

Query: 283 EID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           EID  +     G    + K  +A E+    HG E A  A  +A            +P IS
Sbjct: 58  EIDGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLPEIS 117

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           ++  E    M +  ++ KAG   +   AR  L S  ++I+  ++ +         F    
Sbjct: 118 VAAAE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV-DRGFV-----FKLGA 168

Query: 401 NIKLSFGKKNHIICHLC 417
                 GKK      L 
Sbjct: 169 THVCQAGKKAFGRVTLV 185


>gi|323695191|ref|ZP_08109315.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323500753|gb|EGB16691.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 131

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 3/128 (2%)

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-R 348
           ++G ++N AK+I+A E+T +VHG  EAEKA  A+   F    ++  MPT  +++++ +  
Sbjct: 1   MEGSQLNTAKEILAFELTNLVHGEAEAEKAKEASRALFTSG-NAADMPTAELTEEDFNGD 59

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            + +LT++ K+G A S +EARR+++   + ++   + + K           G I +  GK
Sbjct: 60  EIDILTILQKSGLAPSRSEARRNVEQGGVAVDGEAVKDSKAVFTKAQLSGDG-IVVKRGK 118

Query: 409 KNHIICHL 416
           KN     L
Sbjct: 119 KNFKKVIL 126


>gi|294636382|ref|ZP_06714770.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090357|gb|EFE22918.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 142

 Score = 96.4 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 6/135 (4%)

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH------SQHMPTI 339
                   +   A+ ++A E+T +VHG E  + A       F  S++         +   
Sbjct: 5   EEEDKNSGKAPRAQYVLAEEVTRLVHGAEGLQAAQRITHSLFSGSLNEMTEADFAQLAQD 64

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            +   E+S G  L   +V +    S  +AR+ + SNA+ +N    ++ +      D    
Sbjct: 65  GMPMIEMSIGADLQQALVDSELQPSRGQARKTIASNAVTVNGEKQADPEYTFSDSDRLFG 124

Query: 400 GNIKLSFGKKNHIIC 414
               L  GKKN+ + 
Sbjct: 125 RYTLLRRGKKNYCLI 139


>gi|109099438|ref|XP_001107606.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial, partial [Macaca
           mulatta]
          Length = 169

 Score = 96.4 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 8/103 (7%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKNFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N   ++
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALR 145


>gi|297517664|ref|ZP_06936050.1| tyrosyl-tRNA synthetase [Escherichia coli OP50]
          Length = 135

 Score = 96.0 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E  + A       F  S+        + +    +   E+ +G
Sbjct: 8   PRAQCVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 67

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V +    S  +AR+ + SNAI IN    S+ +   K ++        L  GKK
Sbjct: 68  ADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFTLLRRGKK 127

Query: 410 NHIIC 414
           N+ + 
Sbjct: 128 NYCLI 132


>gi|108861908|sp|Q96YV3|SYY_SULTO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 360

 Score = 95.6 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/329 (16%), Positives = 103/329 (31%), Gaps = 19/329 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           +  +     ++       L     +  YIG++ +    H G L     L  L   G   +
Sbjct: 9   IISKNTAEIVTIDELRKKLEENQKLKGYIGFEPSGL-FHIGWLIWAQKLKDLVDVGVDMM 67

Query: 72  -SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + I D    +          + +     +        YG   +   ++  E 
Sbjct: 68  SILVATWHAWINDKLGGN----------LDKIKLAGQYAIEVLNAYGVDMSKVRIVYAED 117

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+  I    S+ RM    ++  R   E  L   +  Y  +Q  D +     
Sbjct: 118 LVKDSNYWALVIRIAKNTSLARMKRALTIMGRKAEEAELDTSKLIYPAMQVADILYQ--- 174

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAIWLNK 249
            D  + +GG+DQ    +   D+ ++L   K+ A+ +PLL     G +M          + 
Sbjct: 175 -DLDIALGGTDQRKAHMLARDVSDKLGKKKVIAIHTPLLIGLQGGQRMEGVEEDDYLASV 233

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK--IIATEIT 307
           +M+        + +     V +  +         ID       K I  AK    +  E  
Sbjct: 234 KMSKSKPETAIFVHDPPEVVEAKLRSAYCPKGVVIDNPVLQINKYIIFAKDNATLKVERD 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHM 336
               G  E +          +  +H   +
Sbjct: 294 IKYGGDIEFKSYEELEKIYSEGKLHPLDL 322


>gi|296108809|ref|YP_003615758.1| tyrosyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433623|gb|ADG12794.1| tyrosyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 308

 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 106/317 (33%), Gaps = 49/317 (15%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
            +R  +  ++       +  +    AYIG++ +   +H GH  Q+  +  L++ G   I 
Sbjct: 5   IKRNTVEIVTEEEL-KKVLEKEEKKAYIGFEPSGK-IHLGHYLQIKKMMDLKEAGFDIII 62

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+    + +          +    +EIQE  E  K +F +         +A  +    + 
Sbjct: 63  LLADLHAYLN---------QKGSLEEIQEIGEYNKKVFKAM------GLEANYIYGSEFQ 107

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               Y+  L  +    ++ R     S+    + +++    E  Y I+Q  D   L    D
Sbjct: 108 LERDYVLNLHRLALNTTLKRA--RRSMELIAREDENPKVAEVIYPIMQVNDIYYL----D 161

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             + +GG +Q    +   +L       K+  + +P+LT   G  KM  +    I ++   
Sbjct: 162 VDVAVGGMEQRKIHMLARELL----DKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDSP 217

Query: 252 TSPYNFWQYWRN---------------------IDDADVVSFAKRLTTLPMSEIDRMAKL 290
                  +                         +       F   +T     E++   K 
Sbjct: 218 EVIREKIKKAYCPIGEVEGNPILEIAKYFLEYPLVVKRPEKFGGDVTFNSYEELETAYKN 277

Query: 291 QGKEINEAKKIIATEIT 307
           +     + K  +A E+ 
Sbjct: 278 KELHPLDLKNAVAEELI 294


>gi|150400632|ref|YP_001324398.1| tyrosyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|150013335|gb|ABR55786.1| tyrosyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 317

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 84/235 (35%), Gaps = 23/235 (9%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           +       AYIG++ +   +H GH  Q+  +  LQ  G K I L+    + +        
Sbjct: 28  ISKGNDKIAYIGFEPSGR-IHLGHYLQIKKMIDLQNAGFKIIILLADLHAYLN------- 79

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
             +    +EI+E  E+ K +      +     +A  +    +    +Y   L ++    +
Sbjct: 80  --QKGTMEEIKELAEQNKKV------FDAIGLNATYIYGSEFQLKPEYNLDLYKVAVNTT 131

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + R      V +R             Y ++Q  D   L    +  + +GG +Q    +  
Sbjct: 132 LKRARRSMEVIAREDDNP--KVAGVVYPLMQVIDIKHL----NADVAVGGMEQRKIHMLA 185

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            ++   +       + +P+LT   G  KM  +    I ++ +  +  +  +    
Sbjct: 186 REILPSMDYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDDDATIKSKIKKAYC 240


>gi|257053593|ref|YP_003131426.1| tyrosyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692356|gb|ACV12693.1| tyrosyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 345

 Score = 94.1 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 88/281 (31%), Gaps = 19/281 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L+ R     ++     ++   +   + YIGY  T   +H GH T +  L      G   
Sbjct: 8   DLATRNTAEVVTEDELRELFEDREEPSVYIGYAPTGE-MHIGHFTTIRKLADFLHAGMDV 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + + D        +              + I +     G        +    
Sbjct: 67  TVLIADLHAHLDD-------AKSPFDLLEARTAYYQETIEAMVEAAGADPEQITFVRGRD 119

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +    +Y   L  + +  ++ R     S    ++   S +     Y ++Q  D       
Sbjct: 120 FELDSEYTLELLRMTAETTIARAQRAAS--EVVRESDSPNLGGLVYPLMQTLDV----DA 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNK 249
            D  +  GG DQ G  +   ++           + +PLL+  +G KM  +   + + L  
Sbjct: 174 LDADVAYGGIDQRGIYMLSREILPEHGGEAPTCVFAPLLSGLTGGKMSASEESSKVALTD 233

Query: 250 EMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEIDR 286
           +  +              ++   V+ + + L    + E + 
Sbjct: 234 DPDTVVEKIGDAYCPMGEVEGNGVLEYVRYLVFPILDEREE 274


>gi|55377417|ref|YP_135267.1| tyrosyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74553031|sp|Q5V4J1|SYY_HALMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|55230142|gb|AAV45561.1| tyrosyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 346

 Score = 94.1 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 89/274 (32%), Gaps = 20/274 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++   EL  L  +   +AYIGY  T   +H GH T +  L    + G   
Sbjct: 8   DLVTRHTTEVVT-EDELRTLFEESDPSAYIGYAPTGE-MHIGHFTTMRKLADFLRAGVDV 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + + D        +         +      I       G    D   +    
Sbjct: 66  TVLIADLHAHLDD-------NKSPFDLLDARSAYYETAIEGMIEAAGADPEDVTFVRGTD 118

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +    +Y   +  + +  +++R     S    ++  +S +     Y ++Q  D     K 
Sbjct: 119 FQLDEEYTLEMYRMAAETTISRTQRAAS--EVVRESESPNLGGLIYPLMQTLDV----KA 172

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIWLNK 249
            D  +  GG DQ G  +   ++           L +PLL+  SG KM  +  +  + L  
Sbjct: 173 LDADIAYGGVDQRGIYMLSREILPDHGGESPICLFAPLLSGLSGGKMSASDEASKVNLTD 232

Query: 250 EMTSPYNFWQYWRN----IDDADVVSFAKRLTTL 279
                             +++  V+ + + L   
Sbjct: 233 SPDEVDEKINQAYCPAGEVEENGVLEYLQHLVFP 266


>gi|84489173|ref|YP_447405.1| tyrosyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|108861905|sp|Q2NHE1|SYY_METST RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84372492|gb|ABC56762.1| TyrS [Methanosphaera stadtmanae DSM 3091]
          Length = 318

 Score = 93.7 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 81/269 (30%), Gaps = 27/269 (10%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            +I    EL  L  +    AY+G++ +   +H GH   +  +  LQ  G K    +    
Sbjct: 15  AEIIEVEELKELLKKDEKRAYVGFEPSGK-VHLGHALTIKKMKTLQDAGFKITIFIANLH 73

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +      ++      ++  + NI+  K              D   +     +      
Sbjct: 74  AYLN-----NKGTLDELNEVAKYNIKCFKA--------LGLSEDTNFILGSDRMTPEYIT 120

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           ++ +            S   V      +      +  Y I+QA D      + D  + +G
Sbjct: 121 EVFKAAKLTTIQRAQRSMALVSRNETHD----VAQTLYPIMQALDI----HDLDADIAVG 172

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           G +Q    +   ++  RL       +  PL+  T    KM  +    I ++       N 
Sbjct: 173 GMEQRKIHMLAREILPRLGYRPPVCIHIPLIHGTDGSDKMSSSKGNFIAIDDTPKEIKNK 232

Query: 258 WQYWRNI----DDADVVSFAKRLTTLPMS 282
                      +D  V+  A         
Sbjct: 233 INKSFCPIGVSEDNPVMEIAHYYIFDTHE 261


>gi|307069546|ref|YP_003878023.1| tyrosyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482806|gb|ADM89677.1| tyrosyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 324

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/296 (19%), Positives = 115/296 (38%), Gaps = 12/296 (4%)

Query: 40  IGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           +G+D T   +H GH      +    +        ++G  TSIIGDP+ + ++R  ++ + 
Sbjct: 36  LGFDPTNFKIHLGHYFLLKKIKNIKKIKLFNINIIIGNFTSIIGDPTGKKKTRYFLKYKN 95

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I  N +     F  F+      +   +  N  W   +  I     + S F++N+++  ++
Sbjct: 96  IINNSKIYLLQFGIFL----NISKINIYYNSKWNI-LFKIKYFINLLSKFTLNKIIERKN 150

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R+K ++ +   E  Y I+QAYD V L    D  L++GG DQ  N+     L +++  
Sbjct: 151 FMKRIKNKKPIYLHEIIYSIIQAYDSVIL----DSDLEIGGIDQKFNLFFSRKLQKKINK 206

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK-RLT 277
            K   L  P +  +   K   + S          +    +    NI D  +  +    L+
Sbjct: 207 KKQSILMFPFI-KSLNFKKKMSKSNKKNNININDNYNIIFLKLMNISDNIMFHYYNLLLS 265

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
                         GK     K  ++ +I   ++ +  + K+    +       ++
Sbjct: 266 YKKKKIFFLKKIKSGKYFKNMKIKLSLKIIKKIYNKFFSLKSLKKFINILYNKNNN 321


>gi|270490522|ref|ZP_06207596.1| S4 domain protein [Yersinia pestis KIM D27]
 gi|270339026|gb|EFA49803.1| S4 domain protein [Yersinia pestis KIM D27]
          Length = 147

 Score = 92.1 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 6/135 (4%)

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTI 339
                   +   A+ ++A  +T MVHG E    A       F   +H         +   
Sbjct: 10  EEEDKNSGKAPRAQYVLAENVTGMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQD 69

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            +   E++R   L   +V A    S  +AR  + SNA+ IN    ++ +      D    
Sbjct: 70  GMPTVELNRDADLQQALVNAELVPSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFG 129

Query: 400 GNIKLSFGKKNHIIC 414
               L  GKK++ + 
Sbjct: 130 RYTLLRRGKKHYCLI 144


>gi|82540397|ref|XP_724520.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479187|gb|EAA16085.1| tyrosyl-tRNA synthetase 1-related [Plasmodium yoelii yoelii]
          Length = 173

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQ 56
             KS+ L  L ER  I+ IS+ + +D +       ++   + Y+G DL    LH G L Q
Sbjct: 54  KIKSNALKKLYERKLINYISDLKNVDQILYDNENENENKKSVYLGIDLNCKYLHIGSLVQ 113

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
           L  L  L+      I L+G  T+ IGDPSF+   R+   + EI EN + IK     FI
Sbjct: 114 LKTLEILRNYKTDVIILLGNSTTKIGDPSFQLNERKETLNDEICENEKNIKKSLIDFI 171


>gi|229543048|ref|ZP_04432108.1| RNA-binding S4 domain protein [Bacillus coagulans 36D1]
 gi|229327468|gb|EEN93143.1| RNA-binding S4 domain protein [Bacillus coagulans 36D1]
          Length = 103

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           M HG   A +A       F       H+P +   + +  + + ++ L+V+     S +EA
Sbjct: 1   MYHGEAAAVQAEENFKNVFQKGALPAHIPAM---RWDGDKTINIIDLLVQLKLQPSKSEA 57

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R+ +++  I+IN   +++    + + D      + +  GK+  +   
Sbjct: 58  RKMIQNGGIRINGEKVNDIHDAVHVTD-----GLIIQVGKRKFVKLQ 99


>gi|297170579|gb|ADI21606.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_06B06]
          Length = 160

 Score = 91.4 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 9/159 (5%)

Query: 267 ADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            DV  + +  T L + EI  +       +   EA+ I+A+E+T ++HG E    A   + 
Sbjct: 1   MDVYKYLRYFTFLSIEEIQEIELSDKSSQSKPEAQSILASEVTKLLHGGEGLAAAKRISD 60

Query: 325 ECFDMSIHS------QHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAI 377
             F   I        + +    + K   + G + ++ ++V+   A S   AR  + +NAI
Sbjct: 61  SLFSGDISKLTRDDLKQLDLDGLPKTSFAGGQVDIIQVLVRTELAKSNKMAREFIGNNAI 120

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +N S++ +  L +   +    G   L  GKK   +  +
Sbjct: 121 SVNGSLVHSGDLILDASNALEGGYFVLRRGKKMFHLIKV 159


>gi|207109787|ref|ZP_03243949.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 155

 Score = 90.2 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M  N TWL        + E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 1   MCFNSTWL-DALGAKGMIELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 59

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTT-ASGTKMGKTLS 242
           V +    D  +++GG+DQ  N++ G  L        +   +T PLL       KM K+L 
Sbjct: 60  VAI----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 115

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
             + + +    P   +    ++ D  +  +   L+   + EI+
Sbjct: 116 NYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIE 155


>gi|323695172|ref|ZP_08109303.1| hypothetical protein HMPREF9475_04168 [Clostridium symbiosum
           WAL-14673]
 gi|323500772|gb|EGB16703.1| hypothetical protein HMPREF9475_04168 [Clostridium symbiosum
           WAL-14673]
          Length = 86

 Score = 90.2 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 336 MPTISISKDEVS-RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           MPT  +++++ +   + +LT++ K+G A S +EARR+++   + ++   + + K      
Sbjct: 1   MPTAELTEEDFNGDEIDILTILQKSGLAPSRSEARRNVEQGGVAVDGEAVKDSKAVFTKA 60

Query: 395 DFDSTGNIKLSFGKKNHIICHL 416
                G I +  GKKN     L
Sbjct: 61  QLSGDG-IVVKRGKKNFKKVIL 81


>gi|327311627|ref|YP_004338524.1| tyrosyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326948106|gb|AEA13212.1| tyrosyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 326

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 117/353 (33%), Gaps = 39/353 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R  +  I+   E+          AY+GY+     +H G L  +     L + G + 
Sbjct: 4   DLVTRNAVEVIT-EEEVRSRIGG---RAYVGYEPVWP-VHVGWLIWMFKARDLVEAGFEV 58

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L     + I D              E    I ++    S   K+  G+  A       
Sbjct: 59  LLLEATWHAWINDKG------DFASLAEHAARIRELAARISGKFKFKDGRELAA------ 106

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                KY +L+ ++    S+ R+     +  R + E  L F +  Y  +Q  D   L   
Sbjct: 107 ---DPKYWELVVKVAKSTSLARIRRAIPIMGRRQEEVELDFSKLLYPAMQVADMFYL--- 160

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            D  + +GG DQ    +   D+ E+L   K  ++ +P++T+ SG             ++E
Sbjct: 161 -DVDVALGGLDQRRAHMLARDVAEKLGLKKPASIHTPIVTSLSGV------GRMEGTSRE 213

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           +      ++  ++   + +        T    EI +          E +     E+   +
Sbjct: 214 IDEVLALYKMSKSRPGSAIYV------TDTPEEIGKKIWAAYCPPREVEFNPVFELAAYL 267

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--GLLTLIVKAGF 361
                            D    ++      +    + + +  GL+ L+ + G 
Sbjct: 268 L-VPYGGPLEIGGRRYEDAKALAEDYKNGVLQPQALKQAVADGLVGLLSRLGL 319


>gi|15791055|ref|NP_280879.1| tyrosyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236805|ref|YP_001690005.1| tyrosyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|74576519|sp|Q9HN62|SYY_HALSA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783609|sp|B0R7E0|SYY_HALS3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|10581650|gb|AAG20359.1| tyrosyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727871|emb|CAP14659.1| tyrosine--tRNA ligase [Halobacterium salinarum R1]
          Length = 327

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 22/232 (9%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                Y+GY+ +   LH GHL     L  LQ  G + + L+    + + D          
Sbjct: 28  EGKRVYVGYEPSG-VLHLGHLLTANKLMDLQDAGMEVVVLLADVHAYLNDKG-------- 78

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
              +EI+   +++K  F   + YG  +     +   ++     Y   L  +    S+ R 
Sbjct: 79  -SFEEIRATADQMKAQF---LAYGLDEDQTEFVLGSSFQLDEDYELDLHAMQVETSLKRA 134

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                  + ++  ++       Y ++QA D   L    D  L +GG DQ    +   +  
Sbjct: 135 QRA---MAEIQSGETPKVSHVVYPLMQALDIEYL----DLDLAIGGMDQRKVHMLAREEL 187

Query: 214 ERLKTPKLFALTSPLL--TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             +   K   L +P++    +   KM  +    I +                
Sbjct: 188 PSVGYEKRPVLHTPIIGDLGSGDGKMSSSEGVTISMEDSTADIEEKVTGAFC 239


>gi|226479904|emb|CAX73248.1| tyrosyl-tRNA synthetase [Schistosoma japonicum]
          Length = 347

 Score = 88.7 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +D+ R +   F ++ +L  ESV+ R+    ++   EF Y ILQA DF+ L +NYDC  Q
Sbjct: 1   MMDISRNVLPHFKLSELLEKESVKLRMDSGNTMDLGEFFYPILQALDFLYLHENYDCYAQ 60

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL------SGAIWLNKE 250
           +GG DQ GNI CG++L  R    ++F LT PL+TT  G K+GK++         IWL   
Sbjct: 61  VGGHDQIGNITCGLNLIYRKLGRRVFGLTVPLITTPDGQKLGKSVSISDCGMDTIWLMGR 120

Query: 251 MTSPYNFWQYWRNIDDADV-VSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEIT 307
              PY+F+Q   N+ D  +     ++LT     EI+++             +K++A E+T
Sbjct: 121 KLKPYHFYQKILNLPDGIISDKLLRQLTFFAPDEINQLLTNHEKDPSRRTVQKVLAEELT 180

Query: 308 TMVHGREEAEKAATAAMECF 327
            +VHG    + A  A    F
Sbjct: 181 LLVHGAYALQAAELATRIFF 200


>gi|255030759|ref|ZP_05302710.1| tyrosyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 117

 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           A+   ++    + +PT      E      L+  +V  G   S  +AR  + + AI IN  
Sbjct: 27  ALTADEIEQGFKDVPTFVAEDSE----ANLVDWLVTLGIEPSKRQAREDVGNGAIYINGE 82

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              + +  +   D        +  GKK + + 
Sbjct: 83  RQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 114


>gi|1707598|emb|CAA69709.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 72

 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V  G + S   ARR +    + +NN+ + +++   +  DF   G + L  GK++  
Sbjct: 1   VDLLVATGLSNSKGAARRTVAEGGVYVNNARVESDEWVPQESDFLHEGWLVLRRGKRHIA 60

Query: 413 ICH 415
              
Sbjct: 61  GVR 63


>gi|47097764|ref|ZP_00235252.1| S4 domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|47013862|gb|EAL04907.1| S4 domain protein [Listeria monocytogenes str. 1/2a F6854]
          Length = 104

 Score = 87.9 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           A+   ++    + +PT      E      L+  +V  G   S  +AR  + + AI IN  
Sbjct: 14  ALTADEIEQGFKDVPTFVAEDSE----ANLVDWLVTLGIEPSKRQAREDVGNGAIYINGE 69

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              + +  +   D        +  GKK + + 
Sbjct: 70  RQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 101


>gi|300819301|ref|ZP_07099500.1| S4 domain protein [Escherichia coli MS 107-1]
 gi|300528072|gb|EFK49134.1| S4 domain protein [Escherichia coli MS 107-1]
          Length = 77

 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            +G  L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  
Sbjct: 7   KKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRR 66

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 67  GKKNYCLI 74


>gi|289804201|ref|ZP_06534830.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 162

 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 8/162 (4%)

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           +      LT PL+T A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  
Sbjct: 1   RPESGICLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFF 60

Query: 277 TTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI--- 331
           T + + EI+          +   A+ ++A ++T +VHG E    A       F  S+   
Sbjct: 61  TFMDIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSAL 120

Query: 332 ---HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
                + +    +   E+ +G  L+  +V A    S  +AR+
Sbjct: 121 SEADFEQLAQDGVPMVEMEKGADLMQALVDAELQPSRGQARK 162


>gi|110669274|ref|YP_659085.1| tyrosyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109627021|emb|CAJ53497.1| tyrosine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 333

 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 82/217 (37%), Gaps = 20/217 (9%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             R     ++N     +  S     AY+GY+ +   LH GH+     L  LQ  G   I 
Sbjct: 9   ITRNTAEVVTNEEIHALAESPENRRAYVGYEPSG-VLHVGHMLTANKLIELQSIGFDIIV 67

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+    + +     +          EI+E   +++  F   I YG        +   ++ 
Sbjct: 68  LLADVHAYLN---GKG------TFAEIRETASQMREQF---IAYGLDSDQTEFILGSSFQ 115

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
              +YI  L  + +  S+ R        + +K +++ +     Y ++QA D V L    D
Sbjct: 116 FDEEYILDLHALEAETSLARSNRA---MAAIKGDETATVAHAVYPLMQALDIVYL----D 168

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
             L +GG++Q    +   D    +       L +PL+
Sbjct: 169 VDLAIGGTEQRKVHMLARDTLPSIDADAPACLHTPLI 205


>gi|213021807|ref|ZP_03336254.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 68

 Score = 87.1 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 42/67 (62%)

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           ++ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +
Sbjct: 1   MLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDF 60

Query: 117 GTGKTDA 123
             G+  A
Sbjct: 61  DCGENSA 67


>gi|76802047|ref|YP_327055.1| tyrosyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|108861906|sp|Q3IQU8|SYY_NATPD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76557912|emb|CAI49496.1| tyrosine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 345

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 94/282 (33%), Gaps = 23/282 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R F  ++    E++ L  +    TAYIGY  T   +H GH T +  L      G  
Sbjct: 8   DLVAR-FTEEVIERDEIETLFEEQDEPTAYIGYAPTGE-MHIGHFTTMRKLADFIDAGLD 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + + D        +         +    + I       G        +   
Sbjct: 66  VTVLVADLHAHLDD-------AKSPFELLEARSEYYERAIEGMIAAAGADPDGISFIRGT 118

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFES-VRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +     Y   L  + +  +++R     S V  + +     S     Y ++QA D   L 
Sbjct: 119 DFQLDEPYTLDLYRLLADTTLSRAQRAGSEVVRQSENP---SLGSLVYTLMQALDVAAL- 174

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWL 247
              D  +  GG DQ G  +   +        K   + +PLL+  SG KM  + +G+ I L
Sbjct: 175 ---DADIAYGGIDQRGIYMLAREQLPDHGYDKPACVFAPLLSGLSGGKMSASEAGSKINL 231

Query: 248 NKEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEID 285
             +  +               ++  V+ + + L      + D
Sbjct: 232 TDDGEAIDEKIGGAYCPAGETEENGVLEYLEYLVFPVFDQRD 273


>gi|295096026|emb|CBK85116.1| Tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 65

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 26/61 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+ +
Sbjct: 2   QALVDSELQPSRGQARKTIASNAITINGEKQADPEYTFTENDRLYGRYTLLRRGKKNYCL 61

Query: 414 C 414
            
Sbjct: 62  V 62


>gi|213021806|ref|ZP_03336253.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 61

 Score = 86.0 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 1  MPAFK--SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAG 52
          M      S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH G
Sbjct: 1  MEILMASSNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLG 54


>gi|146317775|ref|YP_001197487.1| tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145688581|gb|ABP89087.1| Tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 64

 Score = 85.6 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +G   S  +AR  +++ AI +N   + +    +   D        +  GKK + +
Sbjct: 2   ELLVTSGIVNSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDKIDGELTVIRRGKKKYSV 61

Query: 414 CH 415
             
Sbjct: 62  LT 63


>gi|289524533|ref|ZP_06441387.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502228|gb|EFD23392.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 167

 Score = 85.6 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 2/147 (1%)

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           G+DQ  NII GIDL  +    K + LT PLL TASG K GKT  G +WL+   T+PY F+
Sbjct: 1   GNDQQVNIIAGIDLIRKKLGAKAYGLTYPLLLTASGQKFGKTEEGTVWLSPVRTTPYKFY 60

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEA 316
           Q+W N DD DV  F K  T LP+ +I  +        E  EA+KI+A EIT +VHG   A
Sbjct: 61  QFWINADDRDVEKFLKLFTFLPIDDIKEVMSNHARHPERREAQKILAGEITRVVHGDNAA 120

Query: 317 EKAATAAMECFDMSIHSQHMPTISISK 343
           ++    A    +  I S+ +P   + K
Sbjct: 121 KRVKKLARSYLERPIPSKILPLSCLKK 147


>gi|207110502|ref|ZP_03244664.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 99

 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 11/109 (10%)

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    +  E+A KA     + F  ++    +P I +S+ +   G+G+L ++ + G
Sbjct: 1   DLAGEIVARYYDNEQAIKAKEQFSKVFSANL----LPEI-LSESDFDEGVGILDVLKQIG 55

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           F  ST++ARR ++   +KIN  +I NE  +     F       +  GKK
Sbjct: 56  FCPSTSQARRDIQGGGVKINQEVIKNESYR-----FVKGNY-VIQLGKK 98


>gi|255017198|ref|ZP_05289324.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 67

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK 
Sbjct: 1   NLVDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKK 60

Query: 411 HIIC 414
           + + 
Sbjct: 61  YFLV 64


>gi|48477298|ref|YP_023004.1| tyrosyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|74568194|sp|Q6L2J1|SYY_PICTO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|48429946|gb|AAT42811.1| tyrosyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 329

 Score = 84.4 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 19/220 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHK 69
              ++     ++       L        YIG++ + +  H G  L     +  +   G K
Sbjct: 5   DFVKKNTEEIVTMDEAFKAL--NNNPKGYIGFEPSGNP-HLGTCLLLANKINDMVNAGIK 61

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    +++ D    D +            I K   +F          ++   +   
Sbjct: 62  MTVLLADWHAMVNDKLNGDLNE-----------IRKSGELFKRAWLAAGLNSNVKFVWAS 110

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
             +    Y  LL ++    S+ R+     +  R + +    F ++ Y ++Q  D   L  
Sbjct: 111 ELVEKSDYWSLLLKVAKNASLLRIRRSLPIMGRSEEDADRDFSKYIYPLMQVTDIFYL-- 168

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
             D    +GG DQ    +   D+ ER+   K  ++ +PLL
Sbjct: 169 --DVDFALGGMDQRHAHMLARDIAERMNIKKPVSVHTPLL 206


>gi|300711379|ref|YP_003737193.1| tyrosyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125062|gb|ADJ15401.1| tyrosyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 344

 Score = 84.4 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 16/209 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
            + YIGY  T   +H GH T +  L    + G     L+    + + D        +   
Sbjct: 32  PSIYIGYAPTGE-MHIGHFTTIRKLADFLEAGIDVTVLIADLHAHLDD-------EKSPF 83

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                 +      I +     G    D   +    +     Y   L  + +  ++ R   
Sbjct: 84  ELLEARSAYYEAAIEAMVEASGADPGDIEFVRGTEFELEEPYTLELYRLLADTTLRRAQR 143

Query: 156 FES-VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             S V  + +           Y ++Q+ D   L    D  +  GG DQ G  +   ++  
Sbjct: 144 AGSEVVRQSENP---KLGGLVYTLMQSLDVAAL----DADIAYGGIDQRGIYMLAREILP 196

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                K   L +PLL+  SG KM  + +G
Sbjct: 197 EHGHEKPLCLFAPLLSGLSGGKMSASEAG 225


>gi|82705307|ref|XP_726917.1| tyrosyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482519|gb|EAA18482.1| Tyrosyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 362

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 15/216 (6%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
                G  F +N++L  ESV  + + ++ L+  + NY+ LQAYDF+ L K Y+  +Q+GG
Sbjct: 4   DFLNHGGHFGINKLLRKESVIKKYQNKK-LTLKDLNYISLQAYDFLYLFKKYNTYIQIGG 62

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-----AIWLNKEMTSP 254
           SDQWGNI  GI+  + +   +L+ LT+ LL   +  K  K+L        IW++ E TSP
Sbjct: 63  SDQWGNIQSGIEFCQNIYNKQLYGLTTNLLLYKNNIKFSKSLFHENKKLPIWIDTEYTSP 122

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           Y FW ++RN++D  V S+   LT L ++  + +     K           E+   V   E
Sbjct: 123 YLFWNFFRNVEDQKVQSYIDMLTNLNINLDEELKNEVLKN---------EELKNEVLKNE 173

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           E +       E  +  + ++ +    +  +    G+
Sbjct: 174 ELKNEELKNEELKNEELKNEELKNEELKNENEKNGI 209



 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 13/143 (9%)

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH---- 335
             +E + +A      IN AKK +A  IT  ++G+    K         +   +       
Sbjct: 202 NENEKNGIASRYDDIINSAKKKMADHITNTIYGKSLVNKIHKINKIIKNNKFNEIENLQE 261

Query: 336 ---MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              +P   I+ + + +  + +  ++     A +  +A+  +  N I IN  +I++ K  +
Sbjct: 262 LKILPYNQININLIKQNKINITDILKSFQIAMTNKQAKEKINQNCIYINTKLITDPKYIL 321

Query: 392 KLQDFDSTG-----NIKLSFGKK 409
            + DF  T         L  GKK
Sbjct: 322 NIMDFLKTKNDNNYYALLRLGKK 344


>gi|255024986|ref|ZP_05296972.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 161

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 8/143 (5%)

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A K +A E+T  
Sbjct: 2   TTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAXKTLAAEMTKF 61

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLIVKAGFAT 363
           VH  E  E+A   +   F   + +     I     +V           L+  +V  G   
Sbjct: 62  VHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSEANLVDWLVTLGIEP 121

Query: 364 STNEARRHLKSNAIKINNSIISN 386
           S  +AR  + + AI IN     +
Sbjct: 122 SKRQAREDVGNGAIYINGERQQD 144


>gi|16329762|ref|NP_440490.1| tyrosyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|1652247|dbj|BAA17170.1| tyrosyl tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 78

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP  S++  E++  + L  L+  +G   S++E RR +K  A++++   + +   + +   
Sbjct: 1   MPEFSLA--EITFPVKLAYLLSASGLCPSSSEGRRQIKGGAVRLDGDRLGDVNQEYQKPQ 58

Query: 396 FDSTGNIKLSFGKKNHII 413
                   L  GKK  I 
Sbjct: 59  DLDGK--VLQVGKKKFIR 74


>gi|257388605|ref|YP_003178378.1| tyrosyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257170912|gb|ACV48671.1| tyrosyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 345

 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 19/256 (7%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G  +AYIGY  T   +H GH T +  L    + G     L+    + + D        + 
Sbjct: 30  GTPSAYIGYAPTGE-MHIGHYTTMRKLADFIEAGIDVTVLIADLHAHLDD-------EKS 81

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                   +      I       G    +   +    +    +Y   +  + +  ++ R 
Sbjct: 82  PFDLLDARSEYYQVAIEGMIEAAGADPDEISFVRGTDFQLDEEYTLEMYRMAAETTLART 141

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
               S    ++  +S +     Y ++Q  D     K  D  +  GG DQ G  +   +  
Sbjct: 142 QRAGS--RVVRESESPNLGGLIYPLMQTLDV----KALDADIAYGGDDQRGIYMLSRETL 195

Query: 214 ERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNI----DDAD 268
                     + +PLL+  +G +M  +     + LN    +     +         +D  
Sbjct: 196 PDHGHDAPVCIFAPLLSGLTGEEMSASKEDTKVNLNDSHDAVVEKIEDAYCPMGEREDNG 255

Query: 269 VVSFAKRLTTLPMSEI 284
           V+ + + L    + E 
Sbjct: 256 VLEYLEYLVFPVLEER 271


>gi|260910549|ref|ZP_05917217.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635391|gb|EEX53413.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 75

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 349 GMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           G   + L          S  E R+ ++   + +N   +      +   D      + +  
Sbjct: 5   GQPAIDLFTREDVPVFPSKGEMRKLVQGGGVSLNKEKLVAADRPVTADDLIDGKYLLVQR 64

Query: 407 GKKNHIICHL 416
           GKKN+ +  +
Sbjct: 65  GKKNYYLLIV 74


>gi|164661643|ref|XP_001731944.1| hypothetical protein MGL_1212 [Malassezia globosa CBS 7966]
 gi|159105845|gb|EDP44730.1| hypothetical protein MGL_1212 [Malassezia globosa CBS 7966]
          Length = 398

 Score = 80.6 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/353 (12%), Positives = 104/353 (29%), Gaps = 32/353 (9%)

Query: 11  ILSERGFIHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  RG I ++     +  +   ++  +  Y G   T    H G+L  L  L    + G 
Sbjct: 14  ELITRG-IEEVIGGDLIQKILEENERPLKCYWGTAPTGRP-HVGYLVPLTKLADFLRAGV 71

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           +   L     + +               + ++   E  + I +  +K  G        + 
Sbjct: 72  QVKVLFADIHAFL--------DNMKAPIELVKHRAEYYRQILTCVMKSIGVPTDRLTFVL 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             ++  + KY   +  + +  + +       E V+               Y  LQA D  
Sbjct: 124 GSSYQLTEKYNFDVYRLAAMVTEHDAKKAGAEVVKQVASP----LLSGLLYPGLQALDE- 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
              +  D   Q GG DQ    +       +L   K   + + ++   +G+KM  + +   
Sbjct: 179 ---QFLDVDFQFGGLDQRKIFMFAEQYLPKLGYMKRAHVMNGMVPGMNGSKMSSSDTD-- 233

Query: 246 WLNKEMTSPYNFWQYWRN-------IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
                + SP    +  +        +++  V++F   +        + M     +   ++
Sbjct: 234 SKIDFLDSPSEVAKKIKAAYCMEGVVEENGVLAFVGAVLMPIARVRNEMMHKHTQLDGQS 293

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +  I  E                  +         +      +   ++   + 
Sbjct: 294 QSFIPEEAPEGTLFSIMRADKFGGPLHYASFDDLVRDFKEKKLHPADLKPAVS 346


>gi|294623999|ref|ZP_06702778.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601702|gb|EFF45660.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 175

 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 62/175 (35%), Gaps = 10/175 (5%)

Query: 223 ALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL-- 279
            LT PLL       KM K+L   I +N+      +       I DA    +   L+    
Sbjct: 1   MLTMPLLEGLTGVAKMSKSLGNYIGINEP---AIDIVTKTMKIGDALTWRWIDLLSFDIS 57

Query: 280 --PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
               + +            E K  +A E+ T  H    AE+A             +  +P
Sbjct: 58  LAEAARLKEQVASGELHPREVKLRLARELATRFHDAATAEQAIAGWHAVVTGQGDTSLLP 117

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +     + G+ L  L+  AG   S +EA R LK  A+KI+  ++ +      
Sbjct: 118 LQEVVVP--AEGLRLAGLLTAAGLTPSNSEATRKLKERAVKIDGEVVEDLSRVFT 170


>gi|156836578|ref|XP_001642344.1| hypothetical protein Kpol_242p9 [Vanderwaltozyma polyspora DSM
          70294]
 gi|156112849|gb|EDO14486.1| hypothetical protein Kpol_242p9 [Vanderwaltozyma polyspora DSM
          70294]
          Length = 73

 Score = 79.4 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 2  PAFKSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
             K   L+ L ERG I QIS P  L    L     V  Y G D TA SLH G+L  LM+
Sbjct: 14 TVHKRSLLAELKERGLISQISQPESLLNKALQDGKRVKLYCGADPTARSLHLGNLVPLMI 73


>gi|289809868|ref|ZP_06540497.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 55

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 1   PSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 52


>gi|19173652|ref|NP_597455.1| TYROSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74630141|sp|Q8SRV7|SYYC_ENCCU RecName: Full=Probable tyrosyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|19170858|emb|CAD26632.1| TYROSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 337

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 77/254 (30%), Gaps = 19/254 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +I    EL  + S+  +  Y G  +T    H  +L  LM +      G    
Sbjct: 9   LITRNL-QEILGEEELKRIVSERELNVYWGTAITGKP-HIAYLVPLMKIKDFVDAGCNVK 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L       +       ++ +    +         K I S+             +    +
Sbjct: 67  ILFADIHGFL-------DNLKAPIEKVQHRCAYYEKLIKSALKMLCVDLDRIQFVKGSEF 119

Query: 132 LCSIKY-IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y +DL R +      +   +   V  +++           Y  +QA D V L+  
Sbjct: 120 QKSERYTMDLYRILSITSKHDAKKAGAEVVRQVENPM---VSSLVYPSMQALDEVHLS-- 174

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                Q GG DQ             L   K   L SP+L   +  KM  +    +     
Sbjct: 175 --VDAQFGGVDQRKIFTYARKYLPLLNYEKRIHLMSPMLPGLNSDKMSSS--DDLSKIDL 230

Query: 251 MTSPYNFWQYWRNI 264
           M S    W+  R  
Sbjct: 231 MDSKEAIWRKIRKC 244


>gi|254168593|ref|ZP_04875436.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289595720|ref|YP_003482416.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622427|gb|EDY34999.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533507|gb|ADD07854.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 338

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 80/216 (37%), Gaps = 21/216 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISL 73
           R     I+     + L  +G    Y+G + +   +H G  L     +  L   G   I  
Sbjct: 8   RNVEEVITLEEFENAL--KGNPKGYVGLEPSGR-VHLGTGLIIGNKVKDLMDNGVDMIVF 64

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    ++I D    D         +I+   E +KG+FS+             +  +  + 
Sbjct: 65  LADWHAMINDKFGGDIE-------KIRLAGEYMKGVFSAL------GIRPRYIWADELVS 111

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
             +Y + +  +    ++ R+    ++  R + E  L   +  Y  +Q  D      + + 
Sbjct: 112 KKEYWEKVIRVAKKTTLKRVKRAMTIMGRKEDEAELDSSKIIYPFMQVSDIF----DMEL 167

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
            + +GG DQ    +   DL ++L   K  A+ + LL
Sbjct: 168 DIALGGMDQRHAHMLARDLADKLGYKKPVAIHTVLL 203


>gi|254169083|ref|ZP_04875920.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197621922|gb|EDY34500.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 338

 Score = 77.5 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 80/216 (37%), Gaps = 21/216 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISL 73
           R     I+     + L  +G    Y+G + +   +H G  L     +  L   G   I  
Sbjct: 8   RNVEEVITLEEFENTL--KGNPKGYVGLEPSGR-VHLGTGLIIGNKVKDLMDNGVDMIVF 64

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    ++I D    D         +I+   E +KG+FS+             +  +  + 
Sbjct: 65  LADWHAMINDKFGGDIE-------KIRLAGEYMKGVFSAL------GIRPRYIWADELVS 111

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
             +Y + +  +    ++ R+    ++  R + E  L   +  Y  +Q  D      + + 
Sbjct: 112 KKEYWEKVIRVAKKTTLKRVKRAMTIMGRKEDEAELDSSKIIYPFMQVSDIF----DMEL 167

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
            + +GG DQ    +   DL ++L   K  A+ + LL
Sbjct: 168 DIALGGMDQRHAHMLARDLADKLGYKKPVAIHTVLL 203


>gi|303389381|ref|XP_003072923.1| tyrosyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302066|gb|ADM11563.1| tyrosyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 337

 Score = 77.1 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 87/292 (29%), Gaps = 18/292 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    EL  + S+  +  Y G  +T    H  +L  LM +      G    
Sbjct: 9   LITRNL-QEVLGLEELKKIVSERNLNVYWGTAITGRP-HIAYLVPLMKVKDFLDAGCNVK 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+      +       ++ +    +     I   K I S     G        +    +
Sbjct: 67  VLLADIHGFL-------DNLKAPIEKVQDRCIYYEKLIKSCLKMLGVDLGRIQFIKGSEF 119

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFES-VRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   L +I S  S +      + V  ++K           Y  +QA D V L+  
Sbjct: 120 QKSNEYTMDLYKILSITSEHDAKKAGAQVVKQVKNPM---VSSLIYPAMQALDEVHLS-- 174

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS-GAIWLNK 249
                Q GG DQ             L   K   L SP+L   +  KM  +     I L  
Sbjct: 175 --VDAQFGGVDQRKIFTYARKYLPLLNYEKRIHLMSPMLPGLNSEKMSSSDDLSKIDLMD 232

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
              + +   +     +        K  + +         +       + +++
Sbjct: 233 SKETIFKKIKKCFCEEGNKENGLMKIFSHIIFPIFQHKGENVKITDKDGREM 284


>gi|257077015|ref|ZP_05571376.1| tyrosyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 329

 Score = 76.7 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 18/219 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ++ ++     ++     D++       AYIG++ +    H   L  +  +  L K G   
Sbjct: 5   VILKKNTAEVVTLEECKDLVPDNSE--AYIGFEPSGLP-HIAILIYVNKINELVKLGFNV 61

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + + D    D            + I K        + Y         +    
Sbjct: 62  KVLLADWHARVNDKLGGD-----------IDLIRKSGETLRKSMLYAGLLEGVQFIWATD 110

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            + +  Y +LL +     S+ R+     +  R + +    F ++ Y ++Q  D   L   
Sbjct: 111 LVANPDYWELLLQTAKNSSLLRIRRSLPIMGRTEEDADKDFSKYIYPLMQVTDVFYL--- 167

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
            +  + +GG+DQ    +   D+ E++   K   L  PL+
Sbjct: 168 -NSDIAIGGTDQRHAYMLARDIAEKMGRKKPILLEMPLI 205


>gi|294996639|ref|ZP_06802330.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 210]
          Length = 46

 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query: 8  FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAG 52
           L  LS RG I Q ++   L     +G +T Y G+D TA SLHAG
Sbjct: 2  ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAG 46


>gi|241157431|ref|XP_002408043.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215494290|gb|EEC03931.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 151

 Score = 76.7 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 13/141 (9%)

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--- 346
            +  E   A+K +A +IT +VHG      A  A    F  S   + +  +   +  +   
Sbjct: 10  QKSPEKRVAQKRLAQDITLLVHGERGLSLAQNATEILFGGSRADETLHRLDEEELRLIFG 69

Query: 347 ---------SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
                      G  +L + +KA    S  +A R + +    IN   ++     I      
Sbjct: 70  DAGFVQLAPEPGTTVLDMAMKARLFPSKEDAVRIISAGGFYINQHRVNAPSHVIVPGVHV 129

Query: 397 DSTGNIKLSFGKKNHIICHLC 417
                     GKKN+ +    
Sbjct: 130 LPNKITLARVGKKNYYLIKWI 150


>gi|116334972|ref|YP_802467.1| tyrosyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235253|dbj|BAF35101.1| tyrosyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 325

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 79/217 (36%), Gaps = 26/217 (11%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           + +        G D T  S+H GHL  +  LF+L       I ++G  T+          
Sbjct: 13  IKNNNSKIIKFGIDPTFFSIHLGHLFIINYLFFLIYKKFIIIIIIGDYTTKF-------- 64

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            ++ +  + +  N   +K    + +       +  ++ N  W         +        
Sbjct: 65  -KKKINLKNLIINSICLKSQIKNIL------GEIDVVFNSIWYNKFNLCYFINL------ 111

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +N +     +   LK   S     + Y  +Q+YD V L        ++GG DQ  NIICG
Sbjct: 112 INLVSIKNYINKTLKNNLSKKISNYIYPTIQSYDSVFLK----SGFEIGGLDQLLNIICG 167

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
                +    K   +T  +L + +  K+ K+ +  + 
Sbjct: 168 RIFQSKFNIKKQNIITLKIL-SINNIKISKSKNKHLL 203


>gi|242398216|ref|YP_002993640.1| Tyrosyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259517072|sp|C6A0Z6|SYY_THESM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|242264609|gb|ACS89291.1| Tyrosyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 375

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/327 (14%), Positives = 95/327 (29%), Gaps = 21/327 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGH 68
            L  R    ++     L  L   G  +  YIG++++   +H G  L     +   QK G 
Sbjct: 8   ELVSRKPTEEVLTVDNLKDLLEMGMPLQHYIGFEISG-YIHLGTGLMAGAKIADFQKAGI 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           K    +    S I D    D           +  +   K      IK  G        + 
Sbjct: 67  KTRVFLADWHSWINDKLGGDLE------VIQKVALGYFKEGMKQSIKVMGGDPEKVEFVL 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               L    Y   + +I    ++ RM+   ++  R +  +++ F +  Y  +Q  D    
Sbjct: 121 ASEILERGDYWRTIIDISKNVTLARMMRSITIMGR-QMGEAIDFAKLIYPAMQVADIFYQ 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  +   G DQ    +   ++ E+LK   L               +       + L
Sbjct: 180 ----GVNIAHAGMDQRKAHVIAREVAEKLKYHPLVWD------GKKVKPIAVHHHLLLGL 229

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            +    P    + ++ I     +S +K  + + + +     K + ++       +     
Sbjct: 230 QEPPKWPIEGEEEFKEIKAQMKMSKSKPYSAVFIHDTPEEIKQKLRKAFCPAGEVNYNPV 289

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQ 334
                     +  T             
Sbjct: 290 LDWAEHIIFREEPTEFTIHRPAKFGGD 316


>gi|19075376|ref|NP_587876.1| cytoplasmic tyrosine-tRNA ligase Yrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|3183174|sp|O14055|SYYC_SCHPO RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|3451306|emb|CAA20443.1| cytoplasmic tyrosine-tRNA ligase Yrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 401

 Score = 75.6 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 29/289 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++   + +  + ++  ++ Y G   T    H G+   +M L    K G   
Sbjct: 10  ELITRNL-QEVLGAKMIREILNERDISLYWGSAPTGRP-HCGYFVPMMKLADFLKAGVHV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L+    + +               + +Q  +   + I  S +K           +   
Sbjct: 68  TVLLADVHAFL--------DNMKAPMELVQHRVRYYEIIVKSILKSLNIPIEKLRFVIGS 119

Query: 130 TWLCSIKY--IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           ++     Y   +      +     R    E V+               Y  +QA D   L
Sbjct: 120 SYQLKEDYTLDNFRLAASTTEHTARRAGAEVVKQVASP----LLSSLIYPGMQALDEQYL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  +Q GG DQ    +   ++   L   K   L +P++ + +G KM  + +     
Sbjct: 176 ----GVDVQFGGVDQRKIFVMAEEVLPVLGYKKRGHLMNPMVPSLAGGKMSSSAAAN-AK 230

Query: 248 NKEMTSPYNFWQYWRN-------IDDADVVSFAKRLTTLPMSEIDRMAK 289
              +  P    +  R+       +++   ++F K ++   M        
Sbjct: 231 IDILDDPKTVNKKIRSAFCEPGVVEENGCLAFLKYVSFPAMELRGETEF 279


>gi|77413402|ref|ZP_00789595.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77160572|gb|EAO71690.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 45

 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLH 50
          +    L ERG + Q ++   L     +G V+ Y GYD TA SLH
Sbjct: 2  NIFDELKERGLVFQTTDEDALRKALEEGSVSYYTGYDPTADSLH 45


>gi|170290961|ref|YP_001737777.1| tyrosyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175041|gb|ACB08094.1| tyrosyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 378

 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 88/262 (33%), Gaps = 33/262 (12%)

Query: 11  ILSERGFIH----QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  R         +    E+  L  +G    Y+GY+ +   +H G L  +  L  + + 
Sbjct: 9   ELVLRNLAEPLDEFVMTLDEVKELLGKGG-NVYVGYEPSGP-IHVGTLITVRKLRDMIEA 66

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G   I+LM    +I+          +  +    + ++   K +F        G     + 
Sbjct: 67  GFHSIALMADIHAILN--------LKGPQDLIKEVSMTYWKTVFHEL-----GSKQIEIR 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               +  S  Y+  L  +    +  R     ++ +R K           Y ++QA D + 
Sbjct: 114 LGTDFELSEDYVMDLLTLSQRVTARRAWRAMTMVARGKDPL---VSHMVYPLMQALDILY 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-----FALTSPLLTTASGTKMGKTL 241
           L      ++ +GG+DQ        ++       ++      A+ +PLL   +G KM  ++
Sbjct: 171 LR----VKIAIGGTDQRKIHALTREVFSSDIPLRVERYVPTAIHTPLLPGLTGGKMSSSI 226

Query: 242 SGAIWLNKEMTSPYNFWQYWRN 263
                       P    +   N
Sbjct: 227 --PRSHIAVHDPPELIREKIMN 246


>gi|126350782|ref|XP_001381906.1| PREDICTED: hypothetical protein, partial [Monodelphis domestica]
          Length = 161

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 13/157 (8%)

Query: 272 FAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           + K  T LP+ EI+ + ++     E    +  +ATE+T  VHG+E    A       +  
Sbjct: 1   YLKLFTFLPLPEIEHIMQMHMKAPEKRGPQIRLATEVTKFVHGQEGLGSAKRCTQALYHC 60

Query: 330 SIHSQHMPTIS----------ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
           SI +  + +             S+  +  G  +L    KA          + +    + I
Sbjct: 61  SIDALEIMSDEELKELFKEAPFSELVLEPGTSVLDTCRKANAIPDGPRGYQMITEGGVSI 120

Query: 380 NNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
           N+  ++N +  + + +     G   L  GK+N  +  
Sbjct: 121 NHKPVTNPESVLVVGEHILKNGLSLLKIGKRNFYVIK 157


>gi|118576611|ref|YP_876354.1| tyrosyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118195132|gb|ABK78050.1| tyrosyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 345

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 81/289 (28%), Gaps = 19/289 (6%)

Query: 11  ILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGH 68
            L  R    +I    E+  L  S+     YIG +++   LH G L      +  L K G 
Sbjct: 8   ELVGRPPTEEIVTEDEMHELLGSEAHPRHYIGLEISG-FLHLGSLVSTGYKVNDLAKAGV 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
                +    ++I D    D  R            +  +  F +        T   + + 
Sbjct: 67  DCTIFLADWHTMINDKLGGDMDRIARV-------ADYYRRAFGAVCPTAEIITGTDLYD- 118

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
                  +Y   L        + R +   ++  R +  + L   +  Y  +QA D     
Sbjct: 119 ----EHPEYWTELVRFTMHMPLARTMRALTIMGRSEDAEKLDLGKLIYPAMQAVDI---- 170

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              D  +   G DQ    +   ++  ++      AL   LL   S        +     +
Sbjct: 171 HFLDVDIAHAGMDQRRIHMLVREIYPKMGWKVPVALHQRLLPGLSRPADSSAPAKMSKSD 230

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
                  +                 K     P+ EI R       +  E
Sbjct: 231 PGSGIFMHDTSDEVRSKIRKAWCEEKNTKNNPLLEIARQIIFHENKTME 279


>gi|330955950|gb|EGH56210.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 116

 Score = 74.0 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 9/123 (7%)

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K  +A E+    HG E A  A  +A            +P IS++  E    M +  
Sbjct: 1   PRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISA 57

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++ KAG   +   AR  L S  ++I+  ++ +         F          GKK     
Sbjct: 58  VLNKAGLVKNAAVARDLLASGGVRIDGEVV-DRSFV-----FKLGATHVCQAGKKAFGRV 111

Query: 415 HLC 417
            L 
Sbjct: 112 TLV 114


>gi|315230956|ref|YP_004071392.1| tyrosyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183984|gb|ADT84169.1| tyrosyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 375

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 97/297 (32%), Gaps = 25/297 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGH 68
            L  R    ++   + L  L   G  +  YIG++++   +H G  L     +   QK G 
Sbjct: 8   ELITRKPTEEVLTVKNLRQLLEMGVPLQHYIGFEISG-YIHLGTGLMAGAKIADFQKAGI 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           K    +    S I D    D           +  +   K      IK  G        + 
Sbjct: 67  KTRIFLADWHSWINDKLGGDLE------TIQKVALTYFKEGMKQSIKVMGGDPDKVEFVL 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               L    Y   + +I    +++R++   ++  R +  +++ F +  Y ++Q  D    
Sbjct: 121 ASEILEKGDYWQTVIDISKNVTLSRVMRSITIMGR-QMGEAIDFAKLIYPMMQVADIFYQ 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  +   G DQ    +  I++ E+LK   L      +        +       + L
Sbjct: 180 ----GVNIAHAGMDQRKAHVIAIEVAEKLKYHPL------IWEGKKYKPVAVHHHLLLGL 229

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLT----TLPMSEIDRMAKLQGKEINEAKK 300
            +    P    + ++ I  A  +S +K  +         EI +  +       E + 
Sbjct: 230 QEPPKWPIESEEEFKEIKAAMKMSKSKPYSAVFIHDSPEEIRQKLRKAFCPAREVRY 286


>gi|169838726|ref|ZP_02871914.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 65

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++  G+  A M+NN  
Sbjct: 1   IALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSCFIEF--GENKARMVNNAD 58

Query: 131 WLCSIKY 137
           WL  + Y
Sbjct: 59  WLRDLNY 65


>gi|300709060|ref|XP_002996698.1| hypothetical protein NCER_100158 [Nosema ceranae BRL01]
 gi|263511694|sp|C4V6W1|SYYC_NOSCE RecName: Full=Probable tyrosyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|239606019|gb|EEQ83027.1| hypothetical protein NCER_100158 [Nosema ceranae BRL01]
          Length = 329

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 15/229 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++     ++ + ++  +  Y G   T    H  +   ++ +      G    
Sbjct: 9   LINRNL-KEVIGGDIMEKIINKRDLNVYWGTATTGKP-HIAYFLPILKIKDFVDAGCNVT 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + +       ++ +    +    +    K I           +    +    +
Sbjct: 67  ILLADIHAFL-------DNLKAPIEKIECRSQYYKKIITLMLKSIKVDVSKISFIFGSEY 119

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S KY   +  I +    N      S   +  +   LS     Y  +QA D   L    
Sbjct: 120 QKSNKYFTDILRILNQTKKNDARRAGSEVVKQVKNSKLS--SLVYPAMQALDEEYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +  +Q GG DQ    +   +    LK  K   L +P++   +  KM  +
Sbjct: 174 NVDVQFGGIDQRKIFMYAREFLPLLKYKKRIHLMNPMIPGLNSDKMSSS 222


>gi|260941618|ref|XP_002614975.1| hypothetical protein CLUG_04990 [Clavispora lusitaniae ATCC 42720]
 gi|238851398|gb|EEQ40862.1| hypothetical protein CLUG_04990 [Clavispora lusitaniae ATCC 42720]
          Length = 391

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 69/220 (31%), Gaps = 18/220 (8%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   ++ L    K G +   L+ 
Sbjct: 14  LQEVLNPQIIKNVLENEKRPLKIYWGTAPTGKP-HCGYFVPMIKLAHFLKAGCEVTVLIA 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + +       ++ +          I   + + +              +    +  S 
Sbjct: 73  DLHAYL-------DNMKAPLEVVKYRGIYYERMVKAVLRSINVPIEKLHFVTGSDYQLSA 125

Query: 136 KYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
            Y   L ++ +  S N        V  ++            Y ++QA D   L    D  
Sbjct: 126 DYTMDLFKLSNKVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEQYL----DVD 178

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           +Q GG DQ    +   +    +   K   L +P++     
Sbjct: 179 VQFGGVDQRKIFVLAEEHLPGIGYKKRGHLMNPMVPGLGQ 218


>gi|150951268|ref|XP_001387562.2| tyrosyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149388453|gb|EAZ63539.2| tyrosyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 404

 Score = 72.1 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 21/227 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L  +G   ++ N + +  +  +    V  Y+G   T    H G+   ++ L    K G +
Sbjct: 13  LITKGL-QEVLNGQIIKDVLEKEKRPVKIYLGTAPTGKP-HCGYFVPMIKLAHFLKAGCE 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L+    + +               + +Q   +  + +  + ++           +  
Sbjct: 71  VTVLLADLHAYL--------DNMKAPLEVVQYRAKYYEYVIKAMLRSINVPIDKLRFVVG 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   + ++ +  S N        V  ++            Y ++QA D   L
Sbjct: 123 SEYQLSAQYTMDIFKLSNVVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
                   Q GG DQ    +   +    +   K   L +P++     
Sbjct: 180 ----GVDAQFGGVDQRKIFVLAEENLPSVGYKKRAHLMNPMVPGLGQ 222


>gi|221488404|gb|EEE26618.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 912

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 110/266 (41%), Gaps = 48/266 (18%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV-----------------RSRLKR 165
           A ++ N +WL  +  +D L E G+F S+ R+LS  SV                 RS  + 
Sbjct: 380 AAIVENCSWLSGLSSLDFLTEFGAFLSLPRLLSRSSVEETLGPCLFGRGDRSPTRSSSRN 439

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           + + SF    Y +LQA D+  L + +    Q+GG DQWGNI  G++L  R     LF LT
Sbjct: 440 KANFSFASLAYAVLQAVDWCFLRRRFGVVGQVGGRDQWGNISTGLELARRRDNLCLFGLT 499

Query: 226 SPLLTTASGTKMGKTLSGA-------------------------------IWLNKEMTSP 254
           +PLL   +G KMGK+  GA                               +WL K++T P
Sbjct: 500 TPLLLNRAGVKMGKSGGGAGTKGTRREGEGEKAGGGKEGAMHANTPGGKTVWLRKDLTPP 559

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
             FW+YWRN+DDADV    +  T L + EI+ + +        A   +   +   V    
Sbjct: 560 VEFWRYWRNVDDADVKRLLRWFTLLSLPEIEALEEDTRHCGAGALNYLKEVLADHVTTLV 619

Query: 315 EAEKAATAAMECFDMSIHSQHMPTIS 340
                  A              P +S
Sbjct: 620 HGPSVTKAVRAVVTAGRRQSSAPGVS 645



 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH-KPISLMGGGT 78
           Q S  R +        ++ Y+G DLT  SLH GHL  L+LL  LQ     +P+ L+G  T
Sbjct: 191 QPSGERGMPDEQPDAPLSFYLGIDLTGGSLHIGHLLPLLLLRRLQCLQLVRPVLLLGTAT 250

Query: 79  SIIGDPSFR 87
           +++GDP+ +
Sbjct: 251 TLVGDPTGK 259



 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + L  L+       S   ARR +   A++IN   I     +I L DF+ 
Sbjct: 750 LSLSRLLAGVCLCPSRAAARRLIAQGAVRINGKRIQ-ADGEITLADFEE 797


>gi|18977234|ref|NP_578591.1| tyrosyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|74552094|sp|Q8U2H3|SYY_PYRFU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|18892897|gb|AAL80986.1| tyrosyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 375

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 92/290 (31%), Gaps = 27/290 (9%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            ++     L  L      +  YIG++++   +H G  L     +   QK G K    +  
Sbjct: 16  EEVLTVENLRHLFEIGAPLQHYIGFEISG-YIHLGTGLMAGAKIADFQKAGIKTRVFLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSI 135
             S I D    D           +  ++  K      I+  G        +     L   
Sbjct: 75  WHSWINDKLGGDLE------TIQEVALKYFKVGMEKSIEVMGGKPEKVEFVLASEILEKG 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            Y   + +I    +++R+L   ++  R   E  + F +  Y ++Q  D           +
Sbjct: 129 DYWQTVIDISKNVTLSRVLRSITIMGRKMGEA-IDFAKLIYPMMQVADIFYQ----GVTI 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK-MGKTLSGAIWLNKEMTSP 254
              G DQ    +  I++ E+L+         P++      K +       + L +    P
Sbjct: 184 AHAGMDQRKAHVIAIEVAEKLRY-------HPIIHNGEKLKPVAVHHHLLLGLQEPPKWP 236

Query: 255 YNFWQYWRNIDDADVVSFAKRLT----TLPMSEIDRMAKLQGKEINEAKK 300
               + ++ I     +S +K  +         EI    +       E K 
Sbjct: 237 IESEEEFKEIKAEMKMSKSKPYSAVFIHDSPEEIREKLRKAFCPAREVKY 286


>gi|237833291|ref|XP_002365943.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211963607|gb|EEA98802.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221508909|gb|EEE34478.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 646

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 48/219 (21%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV-----------------RSRLKR 165
           A ++ N +WL  +  +D L E G+F S+ R+LS  SV                 RS  + 
Sbjct: 380 AAIVENCSWLSGLSSLDFLTEFGAFLSLPRLLSRSSVEETLGPCLFGRGDRSPTRSSSRN 439

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           + + SF    Y +LQA D+  L + +    Q+GG DQWGNI  G++L  R     LF LT
Sbjct: 440 KANFSFASLAYAVLQAVDWCFLRRRFGVVGQVGGRDQWGNISTGLELARRRDNLCLFGLT 499

Query: 226 SPLLTTASGTKMGKTLSGA-------------------------------IWLNKEMTSP 254
           +PLL   +G KMGK+  GA                               +WL K++T P
Sbjct: 500 TPLLLNRAGVKMGKSGGGAGTKGTRREGEGEKAGGGKEGAMHAKTPGGKTVWLRKDLTPP 559

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             FW+YWRN+DDADV    +  T L + EI+ + +    
Sbjct: 560 VEFWRYWRNVDDADVKRLLRWFTLLSLPEIEALEEDTRH 598



 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH-KPISLMGGGT 78
           Q S  R +        ++ Y+G DLT  SLH GHL  L+LL  LQ     +P+ L+G  T
Sbjct: 191 QPSGERGMPDEQPDAPLSFYLGIDLTGGSLHIGHLLPLLLLRRLQCLQLVRPVLLLGTAT 250

Query: 79  SIIGDPSFR 87
           +++GDP+ +
Sbjct: 251 TLVGDPTGK 259


>gi|269859348|ref|XP_002649399.1| tyrosyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511692|sp|B7XHC1|SYYC_ENTBH RecName: Full=Probable tyrosyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|220067162|gb|EED44629.1| tyrosyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 342

 Score = 70.6 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 71/233 (30%), Gaps = 19/233 (8%)

Query: 11  ILSERGFIHQ-ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L ER      I++   +  +  +  +  Y G  +T    H G+   ++ +    +   +
Sbjct: 19  TLIERNLQEITINDKEIIRKIIRKRNLKIYWGTAITGKP-HIGYFLPILKIKDFVEAECE 77

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L       +       ++ +              K I    +  G        +   
Sbjct: 78  VTILFADIHGFL-------DNLKAPIELIENRYHYYEKIIKIMLMSVGCDINKIRFVKGS 130

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSF--ESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  +  Y+  L ++ S+ +         + V+ R      +      Y  +QA D   L
Sbjct: 131 DYQKNSDYVFDLYKLCSYTTERDCKRAGSDVVKQRDN----VLLSSLIYPNMQALDEEYL 186

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                   Q GG DQ    +       +L   K   L +P++   +  KM  +
Sbjct: 187 K----VDAQFGGEDQRKIFMHAKTFLPKLGYKKRIHLMNPMMPGLNSDKMSSS 235


>gi|149236750|ref|XP_001524252.1| tyrosyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451787|gb|EDK46043.1| tyrosyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 428

 Score = 70.2 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 74/238 (31%), Gaps = 21/238 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S     L  +G   ++ N + +  +  +    V  Y G   T    H G+   ++
Sbjct: 1   MASLSSQEQYDLITKGL-QEVLNGQIIKDVLEKEQRPVKIYWGTAPTGKP-HCGYFVPMV 58

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YG 117
            L    K G +   L+    + +               + +Q   +  + +  + ++   
Sbjct: 59  KLAHFLKAGCEVTVLLADLHAFL--------DNMKASLEVVQYRAKYYEYVVKAILRSIN 110

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNY 176
                   +   ++     YI  L ++ +  S N        V  ++            Y
Sbjct: 111 VPIEKLKFVIGSSYQQDGPYIMDLFKMSNVVSQNDAKRAGADVVKQVANPL---LSGLIY 167

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
            ++QA D   L        Q GG DQ    +   +    L   K   L +P++     
Sbjct: 168 PLMQAIDEEHLK----VDAQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLGQ 221


>gi|156186012|gb|ABU55324.1| tyrosyl-tRNA synthetase [Callosobruchus chinensis]
          Length = 104

 Score = 70.2 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/102 (51%), Positives = 75/102 (73%)

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDPSF+D++R ++  + I +N   I+ I    + +   KT A+++NN  WL +IKYID L
Sbjct: 3   GDPSFKDKARSILPVENINQNTSSIRRILEKMMSFXDSKTGAMIVNNXDWLDNIKYIDFL 62

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +IG++FSVNRMLSF+SV++RL REQ+L FLE NYM+ QAYD
Sbjct: 63  GDIGAYFSVNRMLSFDSVKTRLDREQTLXFLEXNYMLXQAYD 104


>gi|329766130|ref|ZP_08257689.1| tyrosyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137401|gb|EGG41678.1| tyrosyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 348

 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 111/353 (31%), Gaps = 40/353 (11%)

Query: 11  ILSERG-FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGH 68
            L ER      +++   +++  +      YIG +++   LH G L      +    K G 
Sbjct: 8   ELIERPPTEEVVTHDELIELFKTNSSPKHYIGLEISG-FLHLGSLISTGFKINDFIKAGV 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K    +    ++I D    D         E+   + K          +     +A ++  
Sbjct: 67  KCTIFLADWHTLINDKLGGD--------WEMISRVSKYYK-----DAFNLVCPEANIVLG 113

Query: 129 ETWLCSI-KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
                   +Y   L +     S+ R +   ++  R + E+ +   +  Y  +QA D    
Sbjct: 114 SDLYKEKSEYWSELVKFTKHVSLARTMRTLTIMGRSENEEKIDLAKLLYPPMQAVDI--- 170

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
               D  +   G DQ    +   ++  ++K     A+   LL                 L
Sbjct: 171 -HFLDVDIAHAGMDQRKIHMLVREVFPKMKWKVPVAVHHKLL---------------PGL 214

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +K  T+  +      +  D +   F        +++I +    +    N     I+  + 
Sbjct: 215 SKPATTNDSQILGKMSKSDPNSGIFIHNSDDEILTKIKKAWCEEANIQNNPLLEISKHVI 274

Query: 308 TMVHGREEAEKAATA--AMECFDMSIHSQHMPTISISKDEVSRGMG--LLTLI 356
                  + E+       M   + S          +   ++ + +G  L+ +I
Sbjct: 275 FHEFSEFKVERPEKFGGNMSYTEYSKLESDFAEKKLHPTDLKQTVGEYLVQII 327


>gi|254173925|ref|ZP_04880595.1| tyrosyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214032078|gb|EEB72910.1| tyrosyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 236

 Score = 70.2 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 73/213 (34%), Gaps = 15/213 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGH 68
            L +R    ++     L  L   G  +  YIG++++   +H G  L     +  LQK G 
Sbjct: 8   ELIKRKPTEELLTEENLRHLFEVGIPMQHYIGFEISG-YIHLGTGLMAGAKIADLQKAGI 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           K    +    S I D    D           +  +   K      IK  G        + 
Sbjct: 67  KTRIFLADWHSWINDKLGGDLE------TIQKVALGYFKEGMKQSIKVMGGDPDKVEFVL 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               L    Y   + +I    ++ RM+   ++  R +  +++ F +  Y  +Q  D    
Sbjct: 121 ASEILEKGDYWQTVIDISKNVTLARMMRSITIMGR-QMGEAIDFAKLIYPAMQVADIFYQ 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                  +   G DQ    +  I++ ++LK   
Sbjct: 180 ----GVTIAHAGMDQRKAHVIAIEVAQKLKYHP 208


>gi|161529259|ref|YP_001583085.1| tyrosyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160340560|gb|ABX13647.1| tyrosyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 348

 Score = 69.8 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 103/337 (30%), Gaps = 39/337 (11%)

Query: 11  ILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGH 68
            L ER    ++    EL  L         YIG +++   LH G L      +    K G 
Sbjct: 8   DLIERPPTEEVVTRDELTELFKTNSSPKHYIGLEISG-FLHLGSLISTGFKINDFAKAGV 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K    +    ++I D    +            E I K+   +    K      + ++ + 
Sbjct: 67  KCTIFLADWHTLINDKLGGN-----------WETISKVSKYYQDAFKLVCPDAEIILGSK 115

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +    +Y   L +     S+ R +   ++  R + E+ +   +  Y  +QA D     
Sbjct: 116 L-YEEKTEYWSELVKFTKHMSLARTMRTLTIMGRSENEEKIDVAKLLYPAMQAVDI---- 170

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            + +  +   G DQ    +   ++  ++K     A+   LL                 L+
Sbjct: 171 HSLEVDIAHAGMDQRKIHMLVREIFPKMKWKVPVAVHHKLL---------------PGLS 215

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           K   +  +      +  D +   F          ++++    +    N     IA  +  
Sbjct: 216 KPADTSDSQVLGKMSKSDPNSGVFIHNTDEEIKKKMNKAWCEEANIQNNPLLEIAKTVIF 275

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
                   E++          ++  Q    + I   E
Sbjct: 276 HEFNEMNVERSEKF-----GGNVSYQDYNQLEIDFAE 307


>gi|300123513|emb|CBK24785.2| unnamed protein product [Blastocystis hominis]
          Length = 537

 Score = 69.8 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 68/237 (28%), Gaps = 23/237 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            +  R    ++    EL  +     +  Y G   T    H G+   +  +      G + 
Sbjct: 24  EIITRNL-QEVDGAEELKEILKTRDLKIYWGTSPTGRP-HIGYFVPMSKIGDFLIAGCEV 81

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
             L     + +           M  S E ++   E    +    ++  G        +  
Sbjct: 82  TILFADLHAYL---------DNMKSSWELLKFRTEYYIRVIKGMLRSLGIPLDKLKFVTG 132

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             +  S  Y   +  + S  + +  +    E V+     +         Y  LQA D   
Sbjct: 133 SDYQLSADYTLDMYRLSSLVTEHDAIKAGAEVVKQVANPK----ISGILYPELQALDEEY 188

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           L        Q GG+DQ    +       ++       L + ++    G KM  +   
Sbjct: 189 LH----VDAQFGGTDQRKIFMFAKKYLPKIGYQPRIHLMNFMVPGLVGEKMSSSEEN 241


>gi|57640503|ref|YP_182981.1| tyrosyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74503601|sp|Q5JF63|SYY_PYRKO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57158827|dbj|BAD84757.1| tyrosyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 375

 Score = 69.8 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 72/213 (33%), Gaps = 15/213 (7%)

Query: 11  ILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGH 68
            L ++    ++     L  L      +  YIG++++   +H G  L     +  LQK G 
Sbjct: 8   ELIKKKPTEELLTEENLRHLLEVGAPLQHYIGFEISG-YIHLGTGLMAGAKIADLQKAGV 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           K    +    S I D    D           +  +   K      IK  G        + 
Sbjct: 67  KTRIFLADWHSWINDKLGGDLE------VIQKVALTYFKEGMKQSIKVMGGDPDKVEFVL 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               L    Y   + +I    ++ RML   ++  R +  +++ F +  Y  +Q  D    
Sbjct: 121 ASEILDKGDYWQTVIDISKNVTLARMLRSITIMGR-QMGEAIDFAKLIYPAMQVADIFYQ 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                  +   G DQ    +  I++ ++LK   
Sbjct: 180 ----GVTIAHAGMDQRKAHVIAIEVAQKLKYHP 208


>gi|332159175|ref|YP_004424454.1| tyrosyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034638|gb|AEC52450.1| tyrosyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 375

 Score = 69.8 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 97/297 (32%), Gaps = 27/297 (9%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHK 69
           L  R    ++     L  L      +  YIG++++   +H G  L     +   QK G K
Sbjct: 9   LVMRKPTEEVLTVENLRHLFEVGAPLQHYIGFEISG-YIHLGTGLMAGAKIADFQKAGIK 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
               +    S I D    D           +  ++  K      I+  G        +  
Sbjct: 68  TRVFLADWHSWINDKLGGDLE------VIQEVALKYFKVGMEKSIEVMGGDPKKVEFVLA 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
              L +  Y   + +I    +++R++   ++  R +  +S+ F +  Y ++Q  D     
Sbjct: 122 SEILENGDYWQTVIDISKNVTLSRVMRSITIMGR-QMGESIDFAKLIYPMMQVADIFYQ- 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK-MGKTLSGAIWL 247
                 +   G DQ    +  I++ ++L+         P++      K +       + L
Sbjct: 180 ---GVTIAHAGMDQRKAHVIAIEVAQKLRY-------HPIIHKGEKLKPVAVHHHLLLGL 229

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLT----TLPMSEIDRMAKLQGKEINEAKK 300
            +    P    + ++ I     +S +K  +         EI    +       E + 
Sbjct: 230 QEPPKWPIESEEEFKEIKAQMKMSKSKPYSAVFIHDTPEEIREKLRKAFCPARETRY 286


>gi|320586713|gb|EFW99383.1| tyrosyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 396

 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 89/268 (33%), Gaps = 19/268 (7%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLL 60
           P  K + L ++ E   + +I NP  ++ +  +G  V  Y G   T    H G+L   + +
Sbjct: 17  PETKQEKLDLMYEN--LAEIINPEIIEKVLDEGRSVKVYWGTATTGRP-HTGYLVPAIKI 73

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             L   G +   L+      + D + +     +    +  +   +           G   
Sbjct: 74  AQLLHAGCEVTVLLADIHGFL-D-NLKAPLELVEHRTDYYQWTIRAMLQA-----VGVRT 126

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                +   ++  S  Y+  +  + S  S +      +   +      LS     Y ILQ
Sbjct: 127 EQLRFVRGSSYQKSADYVMDVYRLCSVTSEHDAKKAGAEVVKQTSNAPLS--GLLYPILQ 184

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D   L       +Q GG DQ        +   +L   +   + +P++    G KM  +
Sbjct: 185 ILDEEHL----GVDVQFGGVDQRKLFTAAKEWLPKLGYRQRAHIMNPMIPGLHGGKMSSS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
             G       + +P    +  R  + A 
Sbjct: 241 EEG--SKIDLLDTPEVISKKIRKAEAAP 266


>gi|195168165|ref|XP_002024902.1| GL17993 [Drosophila persimilis]
 gi|194108332|gb|EDW30375.1| GL17993 [Drosophila persimilis]
          Length = 525

 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 93/326 (28%), Gaps = 32/326 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L+ + S+  +  Y G   T    H  +   +  +    K G +
Sbjct: 10  KTLITRNL-QETLGEDKLNKVLSERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLN 127
              L     + +           M     + E   +        +    G        + 
Sbjct: 68  VTILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEKLKFVK 118

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFV 185
              +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D  
Sbjct: 119 GSDYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEE 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L        Q GG DQ            +L   K     +P++   +G KM  +     
Sbjct: 175 YLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED-- 228

Query: 246 WLNKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
                + SP N  +  +       NI D  ++SF K +      E +     +  E    
Sbjct: 229 SKIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVCREAEHGGN 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAM 324
              +  E     +  ++       A 
Sbjct: 289 VTFLKYEDLEKYYAEDKLHPGDLKAT 314


>gi|125977094|ref|XP_001352580.1| GA18259 [Drosophila pseudoobscura pseudoobscura]
 gi|54641328|gb|EAL30078.1| GA18259 [Drosophila pseudoobscura pseudoobscura]
          Length = 525

 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 93/326 (28%), Gaps = 32/326 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L+ + S+  +  Y G   T    H  +   +  +    K G +
Sbjct: 10  KTLITRNL-QETLGEDKLNKVLSERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLN 127
              L     + +           M     + E   +        +    G        + 
Sbjct: 68  VTILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEKLKFVK 118

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFV 185
              +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D  
Sbjct: 119 GSDYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEE 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L        Q GG DQ            +L   K     +P++   +G KM  +     
Sbjct: 175 YLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED-- 228

Query: 246 WLNKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
                + SP N  +  +       NI D  ++SF K +      E +     +  E    
Sbjct: 229 SKIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVCREAEHGGN 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAM 324
              +  E     +  ++       A 
Sbjct: 289 VTFLKYEDLEKYYAEDKLHPGDLKAT 314


>gi|119193446|ref|XP_001247329.1| tyrosyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
 gi|303312069|ref|XP_003066046.1| tyrosyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105708|gb|EER23901.1| tyrosyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320040022|gb|EFW21956.1| tyrosyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 412

 Score = 69.4 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 69/237 (29%), Gaps = 30/237 (12%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ L  +  R                       Y G   T   +H G+L  ++ L   
Sbjct: 22  LKSEILEDIIIR----------------QNRAPVIYWGTASTGR-IHLGYLVPIVKLAHF 64

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
            + G     L+      +       ++ +                I +            
Sbjct: 65  LRAGCHIKILLADIHGFL-------DNLKAPIELVNFRAEYYRHSITALLEAVHVPTDKL 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +   ++  S KY   L  + S  + +      +   +      LS     Y ++QA D
Sbjct: 118 EFVLGSSYQLSPKYTMDLFRLSSVVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
              L        Q GG DQ       ++   R+   +   L +P++   +G KM  +
Sbjct: 176 EEHL----GVDAQFGGVDQRKIFTLAMETLPRVGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|320581681|gb|EFW95900.1| Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA
           synthetase [Pichia angusta DL-1]
          Length = 400

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 72/240 (30%), Gaps = 23/240 (9%)

Query: 1   MPAFKSDFLSILSE--RGFIHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQ 56
           M    +D         +    ++ NP+ +  +    +  +  Y G   T    H G+   
Sbjct: 1   MSEVVTDPQEQFEWITKNL-QEVLNPQIIKHVLEEEKRPLKVYWGTAPTGKP-HCGYFVP 58

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK- 115
           +  L    K G +   L+    + +               + +    +  + +  S +K 
Sbjct: 59  MTKLAHFLKAGCEVTVLLADLHAFL--------DNMKAPLEVVSYRAKYYEYVVKSILKS 110

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEF 174
                     +    +    +Y   L ++ +F + +        V  +++          
Sbjct: 111 INVPIEKLRFVTGSEYQLKPEYTMDLFKLSNFVTTHDAKRAGAEVVKQVENPL---LSGL 167

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
            Y ++QA D   L     C  Q GG DQ        +    L   K   L +P++     
Sbjct: 168 IYPLMQALDEEYL----GCDAQFGGVDQRKIFTLAEENLTTLGYKKRAHLMNPMVPGLGQ 223


>gi|14590851|ref|NP_142923.1| tyrosyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|74571133|sp|O58739|SYY_PYRHO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83754906|pdb|2CYC|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With L-Tyrosine From Pyrococcus Horikoshii
 gi|83754907|pdb|2CYC|B Chain B, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With L-Tyrosine From Pyrococcus Horikoshii
 gi|3257425|dbj|BAA30108.1| 375aa long hypothetical tyrosyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 375

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 92/289 (31%), Gaps = 25/289 (8%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            ++     L  L      +  YIG++++   +H G  L     +   QK G K    +  
Sbjct: 16  EEVLTVENLRHLFEIGAPLQHYIGFEISG-YIHLGTGLMAGAKIADFQKAGIKTRVFLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSI 135
             S I D    D           +  ++  K      I+  G        +     L   
Sbjct: 75  WHSWINDKLGGDLE------VIQEVALKYFKVGMEKSIEVMGGDPKKVEFVLASEILEKG 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            Y   + +I    +++R++   ++  R +  +++ F +  Y ++Q  D           +
Sbjct: 129 DYWQTVIDISKNVTLSRVMRSITIMGR-QMGEAIDFAKLIYPMMQVADIFYQ----GVTI 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
              G DQ    +  I++ ++L+   +               +       + L +    P 
Sbjct: 184 AHAGMDQRKAHVIAIEVAQKLRYHPIVH------EGEKLKPVAVHHHLLLGLQEPPKWPI 237

Query: 256 NFWQYWRNIDDADVVSFAKRLT----TLPMSEIDRMAKLQGKEINEAKK 300
              + ++ I     +S +K  +         EI +  +       E + 
Sbjct: 238 ESEEEFKEIKAQMKMSKSKPYSAVFIHDSPEEIRQKLRKAFCPAREVRY 286


>gi|16081625|ref|NP_393988.1| tyrosyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|74557886|sp|Q9HKT3|SYY_THEAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|10639680|emb|CAC11652.1| probable tyrosyl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 332

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 20/207 (9%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGHKPISLMGGG 77
             ++     + L  +  + +YIG + +    H          L  +Q    K   L+   
Sbjct: 13  EVVTREDA-ERLEGKSDIKSYIGIEPSGIP-HIATAVMWPRKLAEIQD-DIKVTVLLADW 69

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
            ++I +    D          I++  E ++  F +      G T A  +     + S +Y
Sbjct: 70  HAMINNKLHGD-------LDLIRKGGEILRKTFQAE-----GLTKADYVWASDLVDSSEY 117

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             +  +     ++ R++    +  R + +    F  + Y I+Q  D   L    D  +  
Sbjct: 118 WRMFIDTAKRSTLKRVIRSLPIMGRNETDAEKDFSMYLYPIMQVTDIFYL----DVDMAF 173

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFAL 224
           GG DQ    +   D+ E++K  K+ ++
Sbjct: 174 GGMDQRHAHMLARDIAEKMKRKKVVSV 200


>gi|240103127|ref|YP_002959436.1| tyrosyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259517062|sp|C5A5R0|SYY_THEGJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|239910681|gb|ACS33572.1| Tyrosyl-tRNA synthetase (tyrS) [Thermococcus gammatolerans EJ3]
          Length = 375

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 68/200 (34%), Gaps = 15/200 (7%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGGGTSII 81
              L  L   G  +  YIG++++   +H G  L     +  LQK G K    +    S I
Sbjct: 21  EENLRHLFEVGIPMQHYIGFEISG-YIHLGTGLMAGAKIADLQKAGIKTRIFLADWHSWI 79

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDL 140
            D    D           +  +   K      IK  G        +     L    Y   
Sbjct: 80  NDKLGGDLE------TIQKVALTYFKEGMKQSIKVMGGDPDKVEFVLASEILEKGDYWQT 133

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           + +I    ++ RM+   ++  R +  +S+ F +  Y  +Q  D           +   G 
Sbjct: 134 VIDISKNVTLARMMRSITIMGR-QMGESIDFAKLIYPAMQVADIFYQ----GVTIAHAGM 188

Query: 201 DQWGNIICGIDLGERLKTPK 220
           DQ    +  I++ ++LK   
Sbjct: 189 DQRKAHVIAIEVAQKLKYHP 208


>gi|213401525|ref|XP_002171535.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|211999582|gb|EEB05242.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 399

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 85/286 (29%), Gaps = 23/286 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H G+   +M L    K     
Sbjct: 10  ELITRSL-QEVLGGPALKEILKERNLNLYWGTAPTGRP-HCGYFVPMMKLADFLKADVHV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + + D    +    M   Q      E +       +     K   ++ ++  
Sbjct: 68  KVLLADVHAFL-D----NMKAPMELVQYRVRYYEAVVKAILVSLNVPIEKLKFVIGSSYQ 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                   +      +     R    E V+               Y  +QA D   L   
Sbjct: 123 LSKEYTLDNFRLTAITTEHDARRAGAEVVKQVSSP----LLSGLLYPGMQALDEQYL--- 175

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            +   Q GG DQ    +    +   L   K   L +P++ + +G KM  + +        
Sbjct: 176 -EVDAQFGGVDQRKIFVMAEKVLPALGYKKRVHLMNPMVPSLAGGKMSASAAAN-AKIDL 233

Query: 251 MTSPYNFWQYWRN-------IDDADVVSFAKRLTTLPMSEIDRMAK 289
           +  P    +  R+       +++   ++F K ++   M+  +    
Sbjct: 234 LDEPNVVKKKIRSAFCEPGVVEENGCLAFLKFVSFPAMALRNVDEF 279


>gi|14521173|ref|NP_126648.1| tyrosyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|74558315|sp|Q9V027|SYY_PYRAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|5458391|emb|CAB49879.1| tyrS tyrosyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 375

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 92/286 (32%), Gaps = 25/286 (8%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            ++     L  L      +  YIG++++   +H G  L     +   QK G K    +  
Sbjct: 16  EEVLTVENLRHLFEVGAPLQHYIGFEISG-YIHLGTGLMAGAKIADFQKAGIKTRIFLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSI 135
             S I D    D           +  ++  K      I+  G        +     L + 
Sbjct: 75  WHSWINDKLGGDLE------VIQEVALKYFKVGMEKSIEVMGGDPKKVEFVLASEILENG 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            Y   + +I    +++R++   ++  R +  +S+ F +  Y ++Q  D           +
Sbjct: 129 DYWQTVIDISKNVTLSRVMRSITIMGR-QMGESIDFAKLIYPMMQVADIFYQ----GVTI 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
              G DQ    +  I++ ++LK   +               +       + L +    P 
Sbjct: 184 AHAGMDQRKAHVIAIEVAQKLKYHPIVH------NGEKLKPVAVHHHLLLGLQEPPVWPI 237

Query: 256 NFWQYWRNIDDADVVSFAKRLT----TLPMSEIDRMAKLQGKEINE 297
              + ++ I     +S +K  +         EI +  +       E
Sbjct: 238 TSEEQFKEIKAQMKMSKSKPYSAVFIHDSPEEIKQKLRKAFCPARE 283


>gi|212224130|ref|YP_002307366.1| tyrosyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|254783650|sp|B6YWK6|SYY_THEON RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|212009087|gb|ACJ16469.1| tyrosyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 375

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 14/209 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTG 67
           + ++++R     ++      +L     +  YIG++++   +H G  L     +  LQK G
Sbjct: 7   IELITKRPTEELLTVENLRHLLEIGAPMQHYIGFEISG-YIHLGTGLMAGAKIADLQKAG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALML 126
            K    +    S I D    D           +  +   K      IK  G        +
Sbjct: 66  IKTRIFLADWHSWINDKLGGDLE------IIQKVALTYFKEGMKQSIKVMGGDPDKVEFV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
                L    Y   + +I    ++ RM+   ++  R +  +++ F +  Y  +Q  D   
Sbjct: 120 LASEILEKGDYWQTVIDISKNVTLARMMRSITIMGR-QMGEAIDFAKLIYPAMQVADIFY 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER 215
                   +   G DQ    +  I++ ++
Sbjct: 179 Q----GVTIAHAGMDQRKAHVIAIEVAQK 203


>gi|52345886|ref|NP_001004987.1| tyrosyl-tRNA synthetase, cytoplasmic [Xenopus (Silurana)
           tropicalis]
 gi|82183394|sp|Q6DIJ1|SYYC_XENTR RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|49522618|gb|AAH75547.1| tyrosyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 528

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 84/284 (29%), Gaps = 30/284 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    ++  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEDKMKEILKERPLRIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNN 128
             L     + +           M    ++ E   +        +    G        +  
Sbjct: 70  TILFADLHAYL---------DNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLERLRFIRG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TEFQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ             L   K   L +P++   +G KM  +       
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGAKMSSSEEE--SK 231

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEI 284
              + SP +  +  +       NI++  V+SF + +     SE 
Sbjct: 232 IDLLDSPADVKKKLKKAFCEPGNIENNGVLSFVRHVLFPLKSEF 275


>gi|195012011|ref|XP_001983430.1| GH15893 [Drosophila grimshawi]
 gi|193896912|gb|EDV95778.1| GH15893 [Drosophila grimshawi]
          Length = 529

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 90/325 (27%), Gaps = 32/325 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L  +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 12  QQLITRNL-QETLGEDKLQKVLQERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 69

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLN 127
              L     + +           M     + E   +        +    G        + 
Sbjct: 70  VTILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLDKLKFVK 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFV 185
              +  S +Y   + ++ S  +++       E V+     E  L      Y  LQ  D  
Sbjct: 121 GSDYQLSKEYTLDVYKLSSLVTIHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQGLDEE 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L        Q GG DQ            +L   K     +P++   +G KM  +     
Sbjct: 177 YLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED-- 230

Query: 246 WLNKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
                + SP N  +  +       NI D  ++SF K +      + +     +  +    
Sbjct: 231 SKIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKDGEGFEIHRAADNGGD 290

Query: 299 KKIIATEITTMVHGREEAEKAATAA 323
              +  E     +   +       A
Sbjct: 291 ITFLVYEELEQYYADNKLHPGDLKA 315


>gi|255721245|ref|XP_002545557.1| tyrosyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136046|gb|EER35599.1| tyrosyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 386

 Score = 67.1 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 73/240 (30%), Gaps = 24/240 (10%)

Query: 1   MPAFKSDFLSI--LSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQ 56
           M   K D +    L  +G   +  N + +  +  +    V  Y G   T    H G+   
Sbjct: 1   MTVIK-DPVEQYNLITKGL-QETLNGQIIKDVLEKENRPVKIYWGTAPTGKP-HCGYFVP 57

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK- 115
           ++ L    K G +   L+    + +               + +    +  + +  + ++ 
Sbjct: 58  MIKLAHFLKAGCEVTVLLADLHAFL--------DNMKAPLEVVNYRAKYYEFVVKAILRS 109

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEF 174
                     +   ++     YI  L ++ +  S N        V  ++           
Sbjct: 110 INVPIERLKFVVGSSYQQGGDYIMDLFKLSNIVSQNDAKRAGADVVKQVANPL---LSGL 166

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
            Y ++QA D   L        Q GG DQ    +   +    +   K   L +P++     
Sbjct: 167 IYPLMQAIDEEHL----GVDAQFGGVDQRKIFVLAEENLPSIGYKKRAHLMNPMVPGLGQ 222


>gi|170061956|ref|XP_001866460.1| tyrosyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167880031|gb|EDS43414.1| tyrosyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 198

 Score = 67.1 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 17/154 (11%)

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
            P   I      +  E+ EA+K +A E+T +VHG E   KA   +   F  ++ +     
Sbjct: 42  FPAEAILMARHQRTPELWEAQKRLAQELTLLVHGEEGLRKAEDISDALFSGNVQALGELE 101

Query: 339 I----------SISKDEVSRGMGLLTLIVKAGFATSTNE------ARRHLKSNAIKINNS 382
           +           + +     G+ +L + +KA    +  E      A R + +    IN +
Sbjct: 102 VRDIKQTFGGAPLVEILPEPGLSVLDVAMKAKCFRNEREDPILKDATRIIAAGGFSINLN 161

Query: 383 IISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
              N    +         G   L  GK+N+ I  
Sbjct: 162 KAKNVAEVLAPGVHILKNGISLLRVGKRNYYIVK 195


>gi|194744520|ref|XP_001954741.1| GF18421 [Drosophila ananassae]
 gi|190627778|gb|EDV43302.1| GF18421 [Drosophila ananassae]
          Length = 431

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    L +  S      Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 93  LIRRGMFFSHRDLHTILSLRESGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 152

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 153 LVI-----------QLTDDEKTLWKDLKVEDAIKLARENAKDIVAMGFDVNKTFIFNNLE 201

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++         +  I    + N++        S +  +      +    I   + F+   
Sbjct: 202 FMGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGN 261

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAI 245
           K  +C +     DQ        D+  RL  PK     +   P L  A         + A+
Sbjct: 262 KKVNCLIPC-AIDQDPYFRMTRDVAPRLGYPKCALLHSTFFPALQGAKTKMSASDQNSAV 320

Query: 246 WLNKEM 251
           +L    
Sbjct: 321 YLTDTP 326


>gi|148230505|ref|NP_001080746.1| tyrosyl-tRNA synthetase, cytoplasmic [Xenopus laevis]
 gi|82176511|sp|Q7ZX51|SYYC_XENLA RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|28175663|gb|AAH45236.1| Yars-prov protein [Xenopus laevis]
          Length = 528

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 84/284 (29%), Gaps = 30/284 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    ++  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QELLGEDKMKEILKERPLRIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNN 128
             L     + +           M    ++ E   +        +    G        +  
Sbjct: 70  TILFADLHAYL---------DNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLERLRFIRG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TEFQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ             L   K   L +P++   +G KM  +       
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGAKMSSSEEE--SK 231

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEI 284
              + SP +  +  +       N+++  V+SF + +     SE 
Sbjct: 232 IDLLDSPADVKKKLKKAFCEPGNVENNGVLSFVRHVLFPLKSEF 275


>gi|313212933|emb|CBY36833.1| unnamed protein product [Oikopleura dioica]
          Length = 672

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 74/233 (31%), Gaps = 17/233 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    E+  + ++  V  Y G   T    H  +   +  +    + G +  
Sbjct: 137 LISRNL-EEVVGENEIKAVLAERSVKIYWGTATTGKP-HIAYFVPMSKIADFLRAGCEVQ 194

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + I   +E  +   +  ++  G        +    
Sbjct: 195 ILFADLHACL--------DNMKAPWELINYRVEYYRECITGMLESIGVPLDKLSFVKGTD 246

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  S +Y     ++ +  +        +   +      LS     Y  LQA D   L   
Sbjct: 247 YQLSKEYTLDAYKLSTIVTEKDAKKAGAEVVKQSDSAPLS--GLIYPGLQALDEEYLK-- 302

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
               +Q GG DQ    +   +   +L   K   L +P++   +GTKM  + + 
Sbjct: 303 --VDVQFGGVDQRKIFMYARENLPKLGYAKRSHLMNPMVPGLTGTKMSSSEAD 353


>gi|145592484|ref|YP_001154486.1| tyrosyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|158514285|sp|A4WN67|SYY_PYRAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145284252|gb|ABP51834.1| tyrosyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 372

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 16/213 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLM-LLFWLQKTGHK 69
           L  R    ++    EL  +   G  +  YIG++++   +H G     M  +  LQK G +
Sbjct: 9   LILRYPAEEVITVEELKEILQAGYKLNHYIGFEISG-FIHIGTGVVSMSKVVDLQKAGVR 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    S + +    D     +R   +   +E  K I       G        +   
Sbjct: 68  TQILLADIHSWLNNKLGGDLE--TIRRVAVTYYVETFKKIIEVL---GGDPDGTRFVLGS 122

Query: 130 T-WLCSIKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  + +Y  LL +I    +++++    ++   ++     L++    Y  LQ  D   L
Sbjct: 123 DLYHHNDEYWLLLMDITRHLTLSQVRHSLTILGRKMGESIPLAY--LVYPPLQVADVFAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                  +  GG DQ    I   ++  +++   
Sbjct: 181 ----GAHIPHGGIDQRRAHILAREVAHKIRFYP 209


>gi|125772496|ref|XP_001357561.1| GA21996 [Drosophila pseudoobscura pseudoobscura]
 gi|195158992|ref|XP_002020367.1| GL13546 [Drosophila persimilis]
 gi|54637293|gb|EAL26695.1| GA21996 [Drosophila pseudoobscura pseudoobscura]
 gi|194117136|gb|EDW39179.1| GL13546 [Drosophila persimilis]
          Length = 431

 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    L +         Y G   ++ SLH GHL   M+  WLQ+T   P
Sbjct: 93  LIRRGMFFSHRDLHTILTLKEQGKPFYLYTGRGPSSGSLHVGHLIPFMMTKWLQETFDVP 152

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 153 LVI-----------QLTDDEKTLWKDLKVEDAIKLARENAKDIVAMGFDVNKTFIFNNLE 201

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++         +  I    + N++        S +  +      +    I   + F+   
Sbjct: 202 FMGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFLFGN 261

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           K   C +     DQ        D+  RL  PK   + +   P L  A         + A+
Sbjct: 262 KKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAV 320

Query: 246 WLNKEM 251
           +L    
Sbjct: 321 YLTDTP 326


>gi|68470880|ref|XP_720447.1| hypothetical protein CaO19.2694 [Candida albicans SC5314]
 gi|68471338|ref|XP_720217.1| hypothetical protein CaO19.10209 [Candida albicans SC5314]
 gi|46442073|gb|EAL01365.1| hypothetical protein CaO19.10209 [Candida albicans SC5314]
 gi|46442314|gb|EAL01604.1| hypothetical protein CaO19.2694 [Candida albicans SC5314]
 gi|238881548|gb|EEQ45186.1| tyrosyl-tRNA synthetase [Candida albicans WO-1]
          Length = 409

 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 70/227 (30%), Gaps = 21/227 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L  +G   +  N + +  +  +    V  Y G   T    H G+   ++ L    K G +
Sbjct: 13  LITKGL-QETLNGQIIKDVLEKENRPVKIYWGTAPTGKP-HCGYFVPMIKLAHFLKAGCE 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L+    + +               + ++   +  + +  + +K           +  
Sbjct: 71  VTVLLADLHAFL--------DNMKAPLEVVKYRAKYYEFVVKAILKSINVPIERLKFVVG 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            ++     Y+  L ++ +  S N        V  ++            Y ++QA D   L
Sbjct: 123 SSYQKGGDYVMDLFKLSNIVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQAIDEEHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
                   Q GG DQ    +   +    +   K   L +P++     
Sbjct: 180 ----GVDAQFGGVDQRKIFVLAEENLPSIGYKKRAHLMNPMVPGLGQ 222


>gi|313234909|emb|CBY24854.1| unnamed protein product [Oikopleura dioica]
          Length = 552

 Score = 66.7 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 74/233 (31%), Gaps = 17/233 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    E+  + ++  V  Y G   T    H  +   +  +    + G +  
Sbjct: 17  LISRNL-EEVVGENEIKAVLAERSVKIYWGTATTGKP-HIAYFVPMSKIADFLRAGCEVQ 74

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + I   +E  +   +  ++  G        +    
Sbjct: 75  ILFADLHACL--------DNMKAPWELINYRVEYYRECITGMLESIGVPLDKLSFVKGTD 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  S +Y     ++ +  +        +   +      LS     Y  LQA D   L   
Sbjct: 127 YQLSKEYTLDAYKLSTIVTEKDAKKAGAEVVKQSDSAPLS--GLIYPGLQALDEEYLK-- 182

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
               +Q GG DQ    +   +   +L   K   L +P++   +GTKM  + + 
Sbjct: 183 --VDVQFGGVDQRKIFMYARENLPKLGYAKRSHLMNPMVPGLTGTKMSSSEAD 233


>gi|297185013|gb|ADI21122.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB750_07C09]
          Length = 123

 Score = 66.3 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 6/120 (5%)

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPY 255
           MGG+DQ  N++ G  + +  +     A T PLL       KM K+    I + +   SP 
Sbjct: 1   MGGTDQKFNLLVGRHIQQSFEQEPQIAFTMPLLEGLDGVRKMSKSYDNYIGITE---SPN 57

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGR 313
             +    +I D  +  + + L+   + EI   R A  QGK   + K  +A EI +  H  
Sbjct: 58  EMFGKLMSISDELMWRYFELLSFHSLGEIKNFRTAVDQGKNPRDIKFELAIEIVSRFHDM 117


>gi|241954452|ref|XP_002419947.1| cytoplasmic tyrosyl-tRNA synthetase, putative [Candida dubliniensis
           CD36]
 gi|223643288|emb|CAX42162.1| cytoplasmic tyrosyl-tRNA synthetase, putative [Candida dubliniensis
           CD36]
          Length = 407

 Score = 66.3 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 69/227 (30%), Gaps = 21/227 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L  +G   +  N + +  +  +    V  Y G   T    H G+   ++ L    K G +
Sbjct: 13  LITKGL-QETLNGQIIKDVLEKENRPVKIYWGTAPTGKP-HCGYFVPMIKLAHFLKAGCE 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L+    + +               + +    +  + +  + +K           +  
Sbjct: 71  VTVLLADLHAFL--------DNMKAPLEVVNYRAKYYEFVVKAILKSINVPIERLKFVVG 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            ++     Y+  L ++ +  S N        V  ++            Y ++QA D   L
Sbjct: 123 SSYQKGGDYVMDLFKLSNIVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQAIDEEHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
                   Q GG DQ    +   +    +   K   L +P++     
Sbjct: 180 ----GVDAQFGGVDQRKIFVLAEENLPSIGYKKRAHLMNPMVPGLGQ 222


>gi|330955998|gb|EGH56258.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 106

 Score = 66.3 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGK 239
            YD V L       +++GG+DQ  N++ G +L           LT PLL       KM K
Sbjct: 1   GYDSVALK----ADVELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSK 56

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
           +L   + + +     Y+      +I D+ +  + + L+   M EI+ + 
Sbjct: 57  SLGNYVGIQEAPGIMYS---KLVSIPDSLMWRYFELLSFRSMEEINSLK 102


>gi|315040888|ref|XP_003169821.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345783|gb|EFR04986.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 412

 Score = 66.3 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 74/226 (32%), Gaps = 18/226 (7%)

Query: 18  IHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++  P  L+ +       +  Y+G   T    H G+   ++ +    + G     L+ 
Sbjct: 18  LQEVLKPEILEDIIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHVKILLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCS 134
                +               + +    +  + + ++ +K           +   ++  S
Sbjct: 77  DIHGFL--------DNLKAPIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGSSYQLS 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
            KY   +  + S  + +      +   +      LS     Y ++QA D   L    D  
Sbjct: 129 AKYTMDIFRLSSMVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL----DVD 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 183 AQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|50427467|ref|XP_462346.1| DEHA2G18546p [Debaryomyces hansenii CBS767]
 gi|49658016|emb|CAG90853.1| DEHA2G18546p [Debaryomyces hansenii]
          Length = 400

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/330 (10%), Positives = 92/330 (27%), Gaps = 33/330 (10%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
            +  +  Y G   T    H G+   ++ L    K G +   L+    + +          
Sbjct: 34  EKRPLKIYWGTAPTGKP-HCGYFVGMLKLAHFLKAGCEVKVLLADLHAFL--------DN 84

Query: 92  RMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                + +    +  + +  + +K         + +   ++  + +Y   +  + +  S 
Sbjct: 85  MKAPLEVVNYRAKYYECVVKAILKSINVPIDKLIFVVGSSYQLTAEYTMDIFRMSNSVSQ 144

Query: 151 NRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           N        V  ++            Y ++QA D   L        Q GG DQ    +  
Sbjct: 145 NDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEYL----GVDAQFGGVDQRKIFVLA 197

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +  + +   K   L +P++          + S        +  P              V
Sbjct: 198 EENLQSIGYKKRAHLMNPMVPGLGQGG-KMSASDPNSKIDILEDP------------KQV 244

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                     P    +       + + +  + +  E   +     +  +     +    +
Sbjct: 245 RKKVNSAYCAPGEIENNGLIAFIEYVIQPIQELKAEKDGVFKLDIDRPEKYGGPISYDSI 304

Query: 330 SIHSQHMPTISISKDEVSRGM--GLLTLIV 357
                   +  +S  ++  G+   ++ L+ 
Sbjct: 305 DEIKADFASEKLSPVDLKSGVAEKIIELLA 334


>gi|121713488|ref|XP_001274355.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119402508|gb|EAW12929.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 385

 Score = 66.3 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 72/227 (31%), Gaps = 15/227 (6%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ N   ++ + ++G     Y G   T    H G+    + +  L   G     L+  
Sbjct: 17  LQEVLNQDLIEGILAEGRNPRIYWGTSPTGKP-HCGYFVPAVKIAQLLAAGCDVTILIAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
               +       ++ +                I +     G        +   ++  S  
Sbjct: 76  IHGFL-------DNLKAPIELVEHRAKYYEYTITAMLQAVGVSTEKLRFVLGSSYQKSPD 128

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           Y+  +  + S  S +      +   +      LS     Y ILQ  D   L    DC +Q
Sbjct: 129 YVMDVYRLCSLVSEHDAKKAGAEVVKQTDNSPLS--GLLYPILQVLDEQYL----DCDIQ 182

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
            GG DQ        +   +L   K   L +P++   +G KM  +   
Sbjct: 183 FGGIDQRKLFAASTEWQPKLGYRKRAHLMNPMVPGLTGGKMSSSEED 229


>gi|145606232|ref|XP_365747.2| hypothetical protein MGG_02449 [Magnaporthe oryzae 70-15]
 gi|145013947|gb|EDJ98588.1| hypothetical protein MGG_02449 [Magnaporthe oryzae 70-15]
          Length = 388

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 67/232 (28%), Gaps = 18/232 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +      ++     DIL        Y G   T    H G+    + +      G +  
Sbjct: 12  LIKENLEEHLNIEIIEDILAQGRDPKIYWGTATTGRP-HIGYFVPALKIAQFLAAGCELT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+      +       ++ +                I S     G        +    +
Sbjct: 71  ILLADIHGFL-------DNLKAPIEIVQYRAQYYQHVIKSILKAVGVPTEKLRFILGSEF 123

Query: 132 LCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
                YI  + ++ S  S    R    E V+               Y +LQA D   L  
Sbjct: 124 QKGPDYIMDIYKLTSLTSEHDARKAGAEVVKQTDNAP----LSGLLYPLLQALDEEYL-- 177

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
              C  Q GG+DQ        D+  ++   +   L +P++    G KM  + 
Sbjct: 178 --GCDAQFGGTDQRKIFTLAKDVLPKIGYKQRAHLMNPMIPGLQGAKMSSSE 227


>gi|13541820|ref|NP_111508.1| tyrosyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|74575493|sp|Q979Z1|SYY_THEVO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14325257|dbj|BAB60161.1| tRNA synthetase Tyr [Thermoplasma volcanium GSS1]
          Length = 331

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 21/223 (9%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKT 66
            +  L +      ++       L  +  V +YIG + +    H          L  LQ  
Sbjct: 2   LIDKLMK-NTREIVTLEDA-QKLDQKAGVKSYIGIEPSGIP-HVATAVMWPRKLAELQD- 57

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
             K   L+    ++I +    D          I++  E +K  F +      G T A  L
Sbjct: 58  DIKIYVLLADWHAMINNKLHGD-------LDLIRKGGELLKRSFMAE-----GLTKAEYL 105

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
                + S  Y ++  +     ++ R+     +  R + +    F  + Y I+Q  D   
Sbjct: 106 WASQLVSSSNYWEMFIKTAKRSTLKRLTRALPIMGRTEADAEKDFSMYIYPIMQVTDIFY 165

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           L    D  +  GG DQ    +   D+ +++K  K  ++   LL
Sbjct: 166 L----DVDIAFGGMDQRHAHMLARDIADKMKVKKAVSVHGYLL 204


>gi|326471104|gb|EGD95113.1| tyrosyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326479789|gb|EGE03799.1| tyrosyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 412

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 17/231 (7%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  +     +      D++      +  Y+G   T    H G+   ++ +    + G   
Sbjct: 13  LITQNLQEVLKPEILEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L+      +               + +    +  + + ++ +K           +   
Sbjct: 72  KILLADIHGFL--------DNLKAPIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  S KY   +  + S  + +      +   +      LS     Y ++QA D   L  
Sbjct: 124 SYQLSAKYTMDIFRLSSMVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 180 --DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|327302612|ref|XP_003235998.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326461340|gb|EGD86793.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 412

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 17/231 (7%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  +     +      D++      +  Y+G   T    H G+   ++ +    + G   
Sbjct: 13  LITQNLQEVLKPEILEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L+      +               + +    +  + + ++ +K           +   
Sbjct: 72  KILLADIHGFL--------DNLKAPIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  S KY   +  + S  + +      +   +      LS     Y ++QA D   L  
Sbjct: 124 SYQLSAKYTMDIFRLSSMVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 180 --DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|195476718|ref|XP_002086217.1| GE22999 [Drosophila yakuba]
 gi|194186007|gb|EDW99618.1| GE22999 [Drosophila yakuba]
          Length = 525

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 92/324 (28%), Gaps = 32/324 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M     + E   +        +    G        +   
Sbjct: 70  ILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEKLKFVKGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D   L
Sbjct: 121 DYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGREEAEKAATAAM 324
            +  E     +  ++       A 
Sbjct: 291 FLKYEELEKYYAEDKLHPGDLKAT 314


>gi|195496460|ref|XP_002095700.1| GE22552 [Drosophila yakuba]
 gi|194181801|gb|EDW95412.1| GE22552 [Drosophila yakuba]
          Length = 525

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 92/324 (28%), Gaps = 32/324 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M     + E   +        +    G        +   
Sbjct: 70  ILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEKLKFVKGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D   L
Sbjct: 121 DYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGREEAEKAATAAM 324
            +  E     +  ++       A 
Sbjct: 291 FLKYEELEKYYAEDKLHPGDLKAT 314


>gi|254578852|ref|XP_002495412.1| ZYRO0B10648p [Zygosaccharomyces rouxii]
 gi|238938302|emb|CAR26479.1| ZYRO0B10648p [Zygosaccharomyces rouxii]
          Length = 400

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 22/255 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  +    ++ NP+ +  +  +    +  Y G   T    H G+   +  L    K G 
Sbjct: 12  ELITKNL-QEVLNPQIIKDVLEKENRPLKLYWGSAPTGKP-HCGYFVPMTKLADFLKAGC 69

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           + + LM    + +               + +    +  +    + ++           + 
Sbjct: 70  EVVILMADLHAFL--------DNMKAPLEVVNYRAKYYEFTVKAILRSIDVPIEKLKFIT 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             ++     Y   +  + +  S N        V  ++            Y ++QA D   
Sbjct: 122 GSSYQLKPDYTLDIFRLANKVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEQY 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L    D   Q GGSDQ    +   +    L   K   L +P++   +      + S    
Sbjct: 179 L----DVDCQFGGSDQRKIFVLAEETLGSLGYKKRAHLMNPMVPGLTQGG-KMSASDPNS 233

Query: 247 LNKEMTSPYNFWQYW 261
               + SP    +  
Sbjct: 234 KIDLLDSPKQVQKKI 248


>gi|302510002|ref|XP_003016961.1| hypothetical protein ARB_05255 [Arthroderma benhamiae CBS 112371]
 gi|291180531|gb|EFE36316.1| hypothetical protein ARB_05255 [Arthroderma benhamiae CBS 112371]
          Length = 412

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 17/231 (7%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  +     +      D++      +  Y+G   T    H G+   ++ +    + G   
Sbjct: 13  LITQNLQEVLKPEILEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L+      +               + +    +  + + ++ +K           +   
Sbjct: 72  KILLADIHGFL--------DNLKAPIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  S KY   +  + S  + +      +   +      LS     Y ++QA D   L  
Sbjct: 124 SYQLSAKYTMDIFRLSSMVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 180 --DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|555684|gb|AAA85643.1| putative tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2
           155]
          Length = 57

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ARR +    + +NN+ + +++   +  DF   G + L  GK++     
Sbjct: 1   ARRTVAEGGVYVNNARVESDEWVPQESDFLHEGWLVLRRGKRHIAGVR 48


>gi|302663819|ref|XP_003023547.1| hypothetical protein TRV_02294 [Trichophyton verrucosum HKI 0517]
 gi|291187550|gb|EFE42929.1| hypothetical protein TRV_02294 [Trichophyton verrucosum HKI 0517]
          Length = 431

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 17/231 (7%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  +     +      D++      +  Y+G   T    H G+   ++ +    + G   
Sbjct: 32  LITQNLQEVLKPEILEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHV 90

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L+      +               + +    +  + + ++ +K           +   
Sbjct: 91  KILLADIHGFL--------DNLKAPIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGS 142

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  S KY   +  + S  + +      +   +      LS     Y ++QA D   L  
Sbjct: 143 SYQLSAKYTMDIFRLSSMVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL-- 198

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 199 --DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 247


>gi|312601031|gb|ADQ90286.1| Tyrosyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 7/167 (4%)

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHGRE 314
            +Q+  N  D         L+ L +  I+ +      +      +  +A ++   +HG +
Sbjct: 1   MYQFLLNQSDEQAEKIMLWLSFLDLKVINELIFKHKNDKKQRILQYNLAQQVVFDIHGDK 60

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----LTLIVKAGFATSTNEARR 370
             E A       F+   +++      +   ++     +       I+  G   S  E   
Sbjct: 61  GLEIAKKITKILFEKLDYTEITFNDKLELKKIIPYFKVSFFNANQIIDIGIFKSKRELNE 120

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +   A++IN S ISN    I  +  D +    L  GKK   I  L 
Sbjct: 121 FISHKALEINGSKISNIG-DITEELKDKSNLFLLRKGKKYFFIIELI 166


>gi|296813605|ref|XP_002847140.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238842396|gb|EEQ32058.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 412

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 17/231 (7%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  +     +      D++      +  Y+G   T    H G+   ++ +    + G   
Sbjct: 13  LITQNLQEVLKPEIIEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L+      +                 +    E  + + ++ +K           +   
Sbjct: 72  KILLADIHGFL--------DNLKAPIDLVNFRAEYYRYVITAMLKAIHVPIEKLEFVLGS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  S KY   +  + S  + +      +   +      LS     Y ++QA D   L  
Sbjct: 124 SYQLSAKYTMDIFRLSSMVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 180 --DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|307195560|gb|EFN77433.1| Tyrosyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 402

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 84/295 (28%), Gaps = 30/295 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     + +  +L  +  +  +  Y G   T    H G+   +  +    + G + 
Sbjct: 10  ELITRNLAEWLGDE-KLKSILKERDLKLYWGTATTGKP-HIGYFAPMSKIADFLRGGAEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
           I L     + +               + ++   +  + +  + +K       +   +   
Sbjct: 68  IILFADLHAYL--------DNMKAPWELLELRTQYYEAVIKAMLKSINVPLDNLKFVKGT 119

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  + +Y   +  + S  + +       E V+               Y  LQA D   L
Sbjct: 120 DYQLTKEYTLDVYRLSSIITEHDAKKAGAEVVKQVANP----LLSGLLYPGLQALDEQHL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ             L   K   L +P++   +G KM  +       
Sbjct: 176 Q----VDAQFGGIDQRKIFTFAEKYLPMLGYDKRVHLMNPMIPGLAGAKMSSSEE----- 226

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
                S  +       I      +F   ++     +++     Q     + K  +
Sbjct: 227 ----DSKIDLLDNAAAIKKKLKKAFCGNISFTKYEDLETAFAKQEIHPGDLKNAV 277


>gi|195374916|ref|XP_002046249.1| Aats-tyr [Drosophila virilis]
 gi|194153407|gb|EDW68591.1| Aats-tyr [Drosophila virilis]
          Length = 528

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 88/323 (27%), Gaps = 28/323 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L+ +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 12  KQLITRNL-QETLGEDKLNKVLQERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 69

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLN 127
              L     + +           M     + E   K        +    G        + 
Sbjct: 70  VTILFADLHAYL---------DNMKAPWPLLELRTKYYEQVIKAMLSSIGVPLDKLKFVK 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              +  S +Y   + ++ S  +++      +   +      LS     Y  LQ  D   L
Sbjct: 121 GSDYQLSREYTLDVYKLSSLVTIHDAKKAGAEVVKQVEHPLLSC--LLYPGLQGLDEEYL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 179 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 232

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  +      
Sbjct: 233 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFIKHVLFSLFKEGEGFEIYRAADNGGDVT 292

Query: 301 IIATEITTMVHGREEAEKAATAA 323
                     +   +       A
Sbjct: 293 FYQYAELEQYYAENKLHPGDLKA 315


>gi|289740311|gb|ADD18903.1| tyrosyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 514

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 97/334 (29%), Gaps = 30/334 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     +    L  R    ++    +LD +  +  +  Y G   T    H  +   +  +
Sbjct: 1   MSGLTYEEKKELITRNL-QEVLGEDKLDAILKERDLKIYWGTATTGRP-HVAYFVPMSKI 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-KYGTG 119
               K G +   L     + +                 ++   +  + +    +   G  
Sbjct: 59  ADFLKAGCEVTILFADLHAYL--------DNMKAPWSLLELRAQYYEAVIKEMLSSIGVP 110

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYM 177
                 +    +  S +Y   + ++ S  +    R    E V+     E  L      Y 
Sbjct: 111 LDRLKFVKGTDYQLSREYSLDVYKLSSVVTQHDARKAGAEVVKQ---VEYPL-LSGLLYP 166

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
            LQA D   L        Q GG DQ            +L   K   L +P++   +G KM
Sbjct: 167 GLQALDEEYLK----VDAQFGGVDQRKIFTFAEKSLPQLGYEKRIHLMNPMVPGLAGGKM 222

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKL 290
             +          + +P +  +  +       N+ D  ++SF + +      E +  A  
Sbjct: 223 SSSEED--SKIDLLDTPADVKKKLKKAFCEPGNVKDNGLLSFVQHVLFSLFKEGEGFAVS 280

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
           +  E    K     E         +   A   A 
Sbjct: 281 RAPENGGDKTFNNYEDLEEEFASNKLHPADLKAT 314


>gi|194873727|ref|XP_001973267.1| GG13450 [Drosophila erecta]
 gi|190655050|gb|EDV52293.1| GG13450 [Drosophila erecta]
          Length = 525

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 91/324 (28%), Gaps = 32/324 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILGERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M     + E   +        +    G        +   
Sbjct: 70  ILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEKLKFVKGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D   L
Sbjct: 121 DYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGREEAEKAATAAM 324
            +  E     +  ++       A 
Sbjct: 291 FLKYEELEKYYAEDKLHPGDLKAT 314


>gi|156839892|ref|XP_001643632.1| hypothetical protein Kpol_478p10 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114251|gb|EDO15774.1| hypothetical protein Kpol_478p10 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 21/228 (9%)

Query: 11  ILSERGFIHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  +    ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G 
Sbjct: 12  ELITKNL-QEVLNPQIIKNVLEVEKRPLKLYWGTAPTGRP-HCGYFVPMTKLAHFLKAGC 69

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           +   L+    + +               + +    +  +    + ++           + 
Sbjct: 70  EVTVLLADLHAFL--------DNMKAPLEVVNYRAKYYEYTVKAILRSINVPIDKLKFVV 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             ++  S +Y   +  + +  S N        V  ++            Y ++QA D   
Sbjct: 122 GSSYQLSAEYTMDIFRMSNIVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEQY 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           L    D  +Q GG DQ    +   +  + L   K   L +P++   + 
Sbjct: 179 L----DVDVQFGGVDQRKIFVLAEENLQGLGYKKRAHLMNPMVPGLTQ 222


>gi|195590821|ref|XP_002085143.1| GD12469 [Drosophila simulans]
 gi|194197152|gb|EDX10728.1| GD12469 [Drosophila simulans]
          Length = 525

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 92/324 (28%), Gaps = 32/324 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + S+  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILSERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M     + E   +        +    G        +   
Sbjct: 70  ILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLDKLKFVKGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D   L
Sbjct: 121 DYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGREEAEKAATAAM 324
            +  E     +  ++       A 
Sbjct: 291 FLKYEDLEKYYAEDKLHPGDLKAT 314


>gi|45184676|ref|NP_982394.1| AAL148Wp [Ashbya gossypii ATCC 10895]
 gi|44980022|gb|AAS50218.1| AAL148Wp [Ashbya gossypii ATCC 10895]
          Length = 404

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 68/220 (30%), Gaps = 20/220 (9%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    + G +   L+ 
Sbjct: 19  LQEVLNPQIIKEVLEEQKRPLRLYWGTAPTGKP-HCGYFVPMTKLAHFLRAGCEVTVLLA 77

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCS 134
              + +               + +   +   + +  + ++           +   ++  S
Sbjct: 78  DLHAFL--------DNMKASLEVVNYRVRYYEFVVKAILRSINVPIEKLRFVVGSSYQTS 129

Query: 135 IKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
             Y   L  + +  S N        V  ++            Y ++QA D   L      
Sbjct: 130 AAYTMDLFRMSNVVSQNDAKRAGADVVKQVSNPL---LSGLLYPLMQALDEEYL----GV 182

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
             Q GG DQ    +   +    L   K   L +P++   +
Sbjct: 183 DAQFGGVDQRKIFVLAEENMGSLGYKKRAHLMNPMVPGLT 222


>gi|126460665|ref|YP_001056943.1| tyrosyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|158513498|sp|A3MXW0|SYY_PYRCJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126250386|gb|ABO09477.1| tyrosyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 372

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 94/294 (31%), Gaps = 24/294 (8%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGG 76
            ++    EL  L   G  +  YIG++++   +H G     M  +  LQ+ G +    +  
Sbjct: 16  EEVITVEELRELFQGGYKLNHYIGFEISG-FIHIGTGVVSMSKVVDLQRAGVRTTVFLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET-WLCSI 135
             S + +    D     +R   +   +E  K I       G        +     +  + 
Sbjct: 75  IHSWLNNKLGGD--LDTIRRVAVTYYVETFKRIIEVL---GGDPDATRFVLGSDLYHHND 129

Query: 136 KYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +Y  LL +I    +++++    ++   ++     L++    Y  LQ  D   L       
Sbjct: 130 EYWFLLMDITRHLTLSQVRHSLTILGRKMGESIPLAY--LVYPPLQVADVFAL----GAH 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +  GG DQ    I    + ++++           LT          L   +     ++S 
Sbjct: 184 IPHGGIDQRRAHILARQVADKIRFYP--------LTVDGKRIKPVALHHRLLPALNISSK 235

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            +  +    +  +  +  +         EI +          E +     E+  
Sbjct: 236 PSSKEELSELKMSKSIPQSAIFVHDSPEEIRQKVAKAYCPPREVEYNPVLELLR 289


>gi|119479191|ref|XP_001259624.1| tyrosyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119407778|gb|EAW17727.1| tyrosyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 391

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +I NP  ++ + ++G     Y G   T    H G+    + +      G     L+  
Sbjct: 17  LQEILNPDIIEGILAEGRNPKIYWGTSPTGKP-HCGYFVPAVKIAQFLAAGCDVTILIAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSI 135
               +               + ++   +  +    + ++  G        +   ++  S 
Sbjct: 76  IHGFL--------DNLKAPIELVEYRAKYYEYTIRAMLQAVGVSTEKLRFVLGSSYQKSP 127

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
           +Y+  + ++ S  S +      +   +      LS     Y ILQ  D   L    DC +
Sbjct: 128 EYVMDVYKLCSLVSEHDAKKAGAEVVKQSNNSPLS--GLLYPILQVLDEQHL----DCDV 181

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           Q GG DQ        +   +L   K   L +P++   +G KM  +   
Sbjct: 182 QFGGVDQRKLFAASTEWQPKLGYRKRAHLLNPMVPGLTGGKMSSSEEE 229


>gi|70997685|ref|XP_753580.1| tyrosyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66851216|gb|EAL91542.1| tyrosyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159126689|gb|EDP51805.1| tyrosyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 391

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +I NP  ++ + ++G     Y G   T    H G+    + +      G     L+  
Sbjct: 17  LQEILNPDIIEGILAEGRNPKIYWGTSPTGKP-HCGYFVPAVKIAQFLAAGCDVTILIAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSI 135
               +               + ++   +  +    + ++  G        +   ++  S 
Sbjct: 76  IHGFL--------DNLKAPIELVEYRAKYYEYTIRAMLQAVGVSTEKLRFVLGSSYQKSP 127

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
           +Y+  + ++ S  S +      +   +      LS     Y ILQ  D   L    DC +
Sbjct: 128 EYVMDVYKLCSLVSEHDAKKAGAEVVKQSNNSPLS--GLLYPILQVLDEQHL----DCDV 181

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           Q GG DQ        +   +L   K   L +P++   +G KM  +   
Sbjct: 182 QFGGVDQRKLFAASTEWQPKLGYRKRAHLLNPMVPGLTGGKMSSSEEE 229


>gi|327354686|gb|EGE83543.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 396

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 77/256 (30%), Gaps = 25/256 (9%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  + +   I  +        L     +  Y G   T    H G+   ++ L    + G 
Sbjct: 18  LQEVLKPELIEDVI-------LRQNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLRAGC 69

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
               L+      +                 +    +  + + ++ ++           + 
Sbjct: 70  HVKILLADIHGFL--------DNLKAPIDLVNFRAKYYRYVITALLEAIHVPIDKLEFVL 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              +  S KY   L  + S  + +      +   +      LS     Y ++QA D   L
Sbjct: 122 GSDFQLSPKYTMDLFRLSSVVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
               D   Q GG DQ       ++   R+   +   L SP++   +G KM  + S     
Sbjct: 180 ----DVDAQFGGVDQRKIFTLALETLPRIGYKERAHLMSPMVPGLAGGKM--SASDPDSK 233

Query: 248 NKEMTSPYNFWQYWRN 263
              + +P    +  R 
Sbjct: 234 IDILDTPETVKKKLRK 249


>gi|256072924|ref|XP_002572783.1| tyrosyl-tRNA synthetase [Schistosoma mansoni]
 gi|238657948|emb|CAZ29015.1| tyrosyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 1010

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 72/236 (30%), Gaps = 23/236 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV--VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  R    ++    EL  L  +    V+ Y G   T    H  +   ++ L  + KTG 
Sbjct: 7   TLIVRNL-QEVVGDDELQNLLKKPNSSVSVYWGTATTGRP-HIAYFVPIIKLADMLKTGA 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-GKTDALMLN 127
           K   L     + +                 +    +  + +     +           + 
Sbjct: 65  KVTVLFADLHAYL--------DNMKAPWSLLCLRTKYYEAVIKGMFRSICVPLDRLHFVR 116

Query: 128 NETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
              +  + +Y   +  + +  SV   R    E V+               Y +LQA D V
Sbjct: 117 GADYQLTEEYSMDVYRLMALTSVHDARKAGAEVVKQVNNP----LVSGLLYPLLQALDEV 172

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            L       +Q GG DQ    +        L   K   L +P++   +G KM  + 
Sbjct: 173 HLK----VDIQFGGVDQRKIFMLAEKYLPHLGHKKRIHLMNPMVPGLTGGKMSSSE 224


>gi|167045012|gb|ABZ09676.1| putative tRNA synthetases class I (W and Y) [uncultured marine
           crenarchaeote HF4000_APKG8G15]
          Length = 348

 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 72/217 (33%), Gaps = 18/217 (8%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGG 77
             ++    L++  +      YIG +++   LH G L      +    K G      +   
Sbjct: 17  EVVTQEELLELFKTNSKPKHYIGIEISG-FLHLGSLISTSFKINDFVKAGVDCTVFLADW 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
            +++ +    +          I++  +  +  F              + ++       +Y
Sbjct: 76  HTLLNEKLGGNFE-------TIRKVSKYYEDAFRLVCPEANVVLGTDLYDS-----KKEY 123

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
                +I    S+ R +   ++  R + ++ +   +  Y  +QA D      + D  +  
Sbjct: 124 WSEFVQIAKHMSLARTMRTLTIMGRSENDEKVDLAKLIYPAMQATDI----HSLDLDIVH 179

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
            G DQ    +   D+  ++K     A+   LL   + 
Sbjct: 180 AGMDQRKIHMLVKDVFPKMKWKVPVAVHHKLLPGLTK 216


>gi|195428555|ref|XP_002062338.1| GK17487 [Drosophila willistoni]
 gi|194158423|gb|EDW73324.1| GK17487 [Drosophila willistoni]
          Length = 529

 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 67/238 (28%), Gaps = 23/238 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L+ +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 10  KELITRNL-QETLGEDKLNAILKERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLN 127
              L     + +           M     + E   +        +    G        + 
Sbjct: 68  VTILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKSMLRSIGVPLEKLRFVK 118

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFV 185
              +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D  
Sbjct: 119 GSDYQLSKEYTLDVYKLTSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEE 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L        Q GG DQ            +L   K     +P++   +G KM  +   
Sbjct: 175 YLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED 228


>gi|89270952|emb|CAJ82065.1| tyrosyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 241

 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 70/250 (28%), Gaps = 23/250 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    ++  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEDKMKEILKERPLRIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNN 128
             L     + +           M    ++ E   +        +    G        +  
Sbjct: 70  TILFADLHAYL---------DNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLERLRFIRG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TEFQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ             L   K   L +P++   +G KM  +       
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGAKMSSSEEE--SK 231

Query: 248 NKEMTSPYNF 257
              + SP + 
Sbjct: 232 IDLLDSPADV 241


>gi|296425898|ref|XP_002842475.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638743|emb|CAZ86666.1| unnamed protein product [Tuber melanosporum]
          Length = 418

 Score = 64.8 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 65/232 (28%), Gaps = 18/232 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L        +       +L     +  Y G   T    H G+   ++ L    + G + 
Sbjct: 17  DLITSNLQEVLKPNIIKSVLAENRPLKIYWGTAPTGRP-HCGYFVPMVKLAHFLRAGCEV 75

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +       ++ +                I S     G        +   +
Sbjct: 76  TVLLADIHAFL-------DNLKAPLELVTHRAKYYELVIKSVLRAIGVPIEKLRFVLGSS 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           +     Y+  L  + S  + +       E V+               Y ++QA D   L 
Sbjct: 129 YQKGAAYVMDLFRLSSIVTEHDAKKAGAEVVKQVASP----LLSGLIYPLMQALDEEHL- 183

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                  Q GG DQ        +    +   +   L +P++   +G KM  +
Sbjct: 184 ---GVDAQFGGVDQRKIFTLAAENLPGIGFKERAHLMNPMVPGLAGGKMSAS 232


>gi|21357223|ref|NP_648895.1| Tyrosyl-tRNA synthetase [Drosophila melanogaster]
 gi|7294108|gb|AAF49462.1| Tyrosyl-tRNA synthetase [Drosophila melanogaster]
 gi|15291635|gb|AAK93086.1| LD21116p [Drosophila melanogaster]
 gi|220954646|gb|ACL89866.1| Aats-tyr-PA [synthetic construct]
 gi|220960052|gb|ACL92562.1| Aats-tyr-PA [synthetic construct]
          Length = 525

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 92/324 (28%), Gaps = 32/324 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M     + E   K        +    G        +   
Sbjct: 70  ILFADLHAYL---------DNMKAPWSLLELRTKYYEQVIKAMLSSIGVPLEKLKFVKGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D   L
Sbjct: 121 DYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGREEAEKAATAAM 324
            +  E     +  ++       A 
Sbjct: 291 FLKYEDLEKYYAEDKLHPGDLKAT 314


>gi|195453306|ref|XP_002073730.1| GK12984 [Drosophila willistoni]
 gi|194169815|gb|EDW84716.1| GK12984 [Drosophila willistoni]
          Length = 426

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 79/253 (31%), Gaps = 26/253 (10%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +  L +RG      +   +  L  QG     Y G   ++ SLH GHL    +  WLQ T 
Sbjct: 85  VHHLIKRGLFFSHRDLHSILTLKEQGKSFYLYTGRGPSSGSLHVGHLVPFFITKWLQDTF 144

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + +  +I++ I+  +      +  G       + N
Sbjct: 145 DVPLVI-----------QLTDDEKVLWKDLKIEDAIKMGRENAKDIVALGFDVNKTFIFN 193

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE- 186
           N  ++             +   + R ++F  V+       S    +  +   QA   +  
Sbjct: 194 NLEFMGK-----CPAMYQNIIRIQRCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPALSS 248

Query: 187 -----LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMG 238
                        L     DQ        D+  RL  PK     +   P L  A      
Sbjct: 249 TFPFIFGNRKTACLIPCAIDQDPYFRMTRDVAPRLGFPKCALLHSTFFPALQGAKTKMSA 308

Query: 239 KTLSGAIWLNKEM 251
              + A++L    
Sbjct: 309 SDQNSAVFLTDTP 321


>gi|50311493|ref|XP_455771.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644907|emb|CAG98479.1| KLLA0F15389p [Kluyveromyces lactis]
          Length = 397

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 18/205 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
            +  +  Y G   T    H G+   +  L    K G +   L+    + +          
Sbjct: 34  EKRPLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVTVLLADLHAFL--------DN 84

Query: 92  RMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                + +    +  + +  + ++           +   ++  S +YI  + ++ +  S 
Sbjct: 85  MKASLEVVAYRAKYYELVIKAILRSINVPIEKLKFVIGSSYQTSNEYIMDIFKLSNIVSQ 144

Query: 151 NRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           N        V  ++            Y ++QA D   L       +Q GG DQ    +  
Sbjct: 145 NDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEHL----GVDVQFGGVDQRKIFVLA 197

Query: 210 IDLGERLKTPKLFALTSPLLTTASG 234
            +  E+L   K   L +P++     
Sbjct: 198 EENLEKLGYKKRAHLMNPMVPGLGQ 222


>gi|328354225|emb|CCA40622.1| tyrosyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 413

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 71/228 (31%), Gaps = 21/228 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  +    ++ NP+ +  +  +    +  Y G   T    H G+   +  L    K G 
Sbjct: 22  DLITKNL-QEVLNPQIIKDVLEKEKRPLKLYWGTAPTGRP-HCGYFVPMTKLAHFLKAGC 79

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           +   L+    + +               + +    +  + +  + ++           + 
Sbjct: 80  EVKVLLADLHAYL--------DNMKAPLEVVAYRAKYYEFVIKAILRSINVPIEKLTFVT 131

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             ++  + +Y   +  I +  S N        V  ++            Y ++QA D   
Sbjct: 132 GSSYQLTPEYTMDIFRISNSVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEH 188

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           L        Q GG DQ    +   +  + L   K   L +P++   + 
Sbjct: 189 LK----VDAQFGGVDQRKIFVLAEENLQSLGYKKRAHLMNPMVPGLAQ 232


>gi|254573694|ref|XP_002493956.1| Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA
           synthetase [Pichia pastoris GS115]
 gi|238033755|emb|CAY71777.1| Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA
           synthetase [Pichia pastoris GS115]
          Length = 404

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 71/228 (31%), Gaps = 21/228 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  +    ++ NP+ +  +  +    +  Y G   T    H G+   +  L    K G 
Sbjct: 13  DLITKNL-QEVLNPQIIKDVLEKEKRPLKLYWGTAPTGRP-HCGYFVPMTKLAHFLKAGC 70

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           +   L+    + +               + +    +  + +  + ++           + 
Sbjct: 71  EVKVLLADLHAYL--------DNMKAPLEVVAYRAKYYEFVIKAILRSINVPIEKLTFVT 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             ++  + +Y   +  I +  S N        V  ++            Y ++QA D   
Sbjct: 123 GSSYQLTPEYTMDIFRISNSVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           L        Q GG DQ    +   +  + L   K   L +P++   + 
Sbjct: 180 LK----VDAQFGGVDQRKIFVLAEENLQSLGYKKRAHLMNPMVPGLAQ 223


>gi|327311785|ref|YP_004338682.1| tyrosyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326948264|gb|AEA13370.1| tyrosyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 372

 Score = 64.4 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 93/302 (30%), Gaps = 26/302 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHK 69
           L  R    ++    EL  L   G  +  YIG++++   +H G  L  +  +  LQ+ G +
Sbjct: 9   LITRYPAEEVLTLEELRGLLESGYKLNHYIGFEISG-YIHIGTGLVSMSKVVDLQRAGVR 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
           P   +    S + +    D           +  +      F   I+  G        +  
Sbjct: 68  PTVFLADIHSWLNNKLGGD------LDLIRRVAVSYYTATFKKIIEALGGDPDGVRFVLG 121

Query: 129 ET-WLCSIKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVE 186
              +  + +Y  LL ++    +++ +    ++   ++     L++    Y  LQ  D   
Sbjct: 122 SDLYHNNDEYWFLLMDVVRNLTLSEVRHSLTILGRKMGESIPLAY--LVYPPLQVADVFA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L       +  GG DQ    I   ++  +++           LT          L   + 
Sbjct: 180 L----GAHIPHGGIDQRRAHILAREVALKVRFYP--------LTVDGKRIKPVALHHKLL 227

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
               ++      +    +  +  +  +         EI +          + +     EI
Sbjct: 228 PALNISDKPKSKEELSEMKMSKSIPQSAIFVHDSPEEIRQKISKAYCPPRDTEYNPVLEI 287

Query: 307 TT 308
             
Sbjct: 288 LR 289


>gi|1584013|prf||2122232A Tyr-tRNA synthetase
          Length = 370

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 76/246 (30%), Gaps = 22/246 (8%)

Query: 4   FKSDFLS---ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           F S+ ++    L  RG   ++     L  +  +  +  Y G   T    H G+   ++ +
Sbjct: 3   FTSEIVNKKYELITRGL-QEVLGAERLRKILEERDLKLYWGTSPTGKP-HCGYFVPMIKI 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTG 119
               K   +   L     + +                 ++   +  + I  + +K  G  
Sbjct: 61  ADFLKAEVEVTILFADIHAFL--------DNLKAPIDIVKYRAKYYEFIIKAILKSIGVS 112

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMI 178
                 +   ++  S KY      + +  + +        V  +++           Y  
Sbjct: 113 TEKLRFVLGSSYQLSSKYCMDNFRLCTIVTEHDAKKAGAEVVKQVENSL---LSGLLYPG 169

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           +QA D   L    D   Q GG DQ             L   K   L SP++   +G KM 
Sbjct: 170 MQALDEEYL----DSDAQFGGVDQRKIFTFAEKYLPMLGLKKRIHLMSPMIPGLAGGKMS 225

Query: 239 KTLSGA 244
            + +  
Sbjct: 226 ASGNEN 231


>gi|167042515|gb|ABZ07240.1| putative tRNA synthetases class I (W and Y) [uncultured marine
           crenarchaeote HF4000_ANIW133C7]
          Length = 354

 Score = 64.0 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/362 (13%), Positives = 112/362 (30%), Gaps = 36/362 (9%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGG 77
             ++    L++  +      YIG +++   LH G L      +    K G      +   
Sbjct: 17  EVVTQEELLELFKTNSKPKHYIGIEISG-FLHLGSLISTSFKINDFVKAGVDCTIFLADW 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
            +++ +               I++  +     F              + ++       +Y
Sbjct: 76  HTLLNEKMGGSFE-------TIRKVSKYYDDAFRLVCPKANIVLGTDLYDS-----KKEY 123

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
              L +I    S+ R +   ++  R + ++ +   +  Y  +QA D      + D  +  
Sbjct: 124 WSELVQIAKHMSLARTMRTLTIMGRSENDEKVDLAKLIYPAMQATDI----HSLDLDIVH 179

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
            G DQ    +   D+  ++K     A+   LL   +                +M+     
Sbjct: 180 AGMDQRKIHMLVKDVFPKMKWKVPVAVHHKLLPGLAKP----PEEKPGGEVVKMSKSDPN 235

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
              + +  D ++       T +     +         +  AK I+  E  T+   R E  
Sbjct: 236 AGIFIHNSDDEIR------TKIKKGFCEEGRTENNPILEIAKHIVFHEFDTITIERPEKF 289

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSR--GMGLLTLI--VKAGFATSTNEARRHLK 373
                 +   +            +   ++ +  G  L+ ++  V+     S +E    +K
Sbjct: 290 G---GNVSYDNFESLESDFLQKKLHPTDLKQSVGESLVKIVSPVREKLVLS-DELSDLIK 345

Query: 374 SN 375
           +N
Sbjct: 346 NN 347


>gi|195328139|ref|XP_002030774.1| GM24400 [Drosophila sechellia]
 gi|194119717|gb|EDW41760.1| GM24400 [Drosophila sechellia]
          Length = 498

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 90/314 (28%), Gaps = 32/314 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M     + E   +        +    G        +   
Sbjct: 70  ILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSAIGVPLEKLKFVKGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D   L
Sbjct: 121 DYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGRE 314
            +  E     +  +
Sbjct: 291 FLKYEDLEKYYAED 304


>gi|324505749|gb|ADY42466.1| Tyrosyl-tRNA synthetase [Ascaris suum]
          Length = 715

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 74/237 (31%), Gaps = 20/237 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R     +   +    L S   +  Y G   T    H G+L  +  +    K G K
Sbjct: 24  RDLIIRNLQEVLGLEKITKQLSSGKNIHIYWGTATTGRP-HVGYLVPMRKIADFLKAGLK 82

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN--IEKIKGIFSSFIKYGTGKTDALMLN 127
              L     + +           M  + E+ EN  I     I +              + 
Sbjct: 83  VTVLFADLHAFL---------DNMKSTWELLENRVIYYEHVIKALLRALDVPIDKLHFVK 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             ++     Y   +  + +  S    L     V  +++           Y +LQA D   
Sbjct: 134 GTSYQLKRDYTSDILRLCNQVSRRDALRAGAEVVKQVESPL---LSGLLYPLLQAMDEQY 190

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           L        Q GG DQ    I   +   +LK  K F L +P++    G+KM  +  G
Sbjct: 191 LK----VDGQFGGLDQRKIFILAEEQMPKLKLGKRFHLMNPMVPGLQGSKMSSSEEG 243



 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 66/263 (25%), Gaps = 38/263 (14%)

Query: 9   LSILSER------GFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           L+ L  R      G    ++    L   + S   +             H G +  L+ L 
Sbjct: 370 LTELQTRRYSNIIGEDEIVTGEEYLKERIASGEKLHVVYSLAPKGR-FHLGFVKPLLKLR 428

Query: 62  WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            LQK G      ++    + +                 ++E            +      
Sbjct: 429 HLQKQGDIAVTIIIADIDAFL---------DNEKCGWNVREARCVYYEAMLEHLLSQLDM 479

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  ++          Y          + +   ++ +         +  S       +  
Sbjct: 480 KDVNIIRGSAHQLEPDY------TLEMYKMASKVTRDD----ASLLEGSSLATLLSPLYY 529

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D   L       L + G D     +    + ER        L    L +  G KM  +
Sbjct: 530 AIDQYWLK----ADLVLAGEDMRQYALLAAQMIERQGERPRAQLLVANLPSMCGGKMSAS 585

Query: 241 LSGAIWLNKEMTSPYNFWQYWRN 263
            +      +    P++  +  R 
Sbjct: 586 DA------EFHLDPFDTAKQTRQ 602


>gi|315425010|dbj|BAJ46684.1| tyrosyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 363

 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 106/336 (31%), Gaps = 29/336 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH----LTQLMLLFWLQK 65
            L  R    ++  P EL  L        AY G++ +       H    L + + L  + +
Sbjct: 8   ELIMRQPTEEVLTPEELRALLETEASPIAYDGFEPSG----LAHIPFALLRAIKLRDMLE 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G +   L+    + I      D        +  +  +E  K         G   +   +
Sbjct: 64  AGCRFKLLLADWHAAINRKMGGDLE---KIRKVGEYFVEVWKAS-------GIDTSRVEI 113

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +          Y  L+ E+    ++ R+L    +  R + E      +  Y  +Q  D  
Sbjct: 114 VWASDLAADRDYWRLVIEVLQNTTLRRVLRCLPIMGRKEGELQE-AAQLLYPGMQVADIF 172

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L    + ++   G DQ    I   ++G +L   K  A+   +L    G    K L    
Sbjct: 173 KL----EAKICQLGLDQRRANILAREIGPKLGFWKPVAVHHHMLMGLEGPTGPKGLEEEE 228

Query: 246 WLNKEMTSPYNFWQ----YWRNIDDADVVSFAKRLTTLPMSEI-DRMAKLQGKEINEAKK 300
            L+ +++S  +        + + D   +          P     + + +     I   K+
Sbjct: 229 NLDIQISSKMSKSIPESSIFVHDDAETIKRKINNAYCPPRQATGNPVLEYCRYIIFPLKQ 288

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            I  E      G       A+   +  +  +H   +
Sbjct: 289 TIVVERPAKYGGEITYTNYASLEKDYTEGKLHPLDL 324


>gi|195062144|ref|XP_001996142.1| GH13981 [Drosophila grimshawi]
 gi|193891934|gb|EDV90800.1| GH13981 [Drosophila grimshawi]
          Length = 431

 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +   +  LC        Y G   ++ SLH GHL   M+  WLQ+T   P
Sbjct: 93  LIRRGIFFSHRDLHTILTLCEQGKPFYLYTGRGPSSESLHIGHLVPFMIAKWLQETFDVP 152

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  +I+E I+  +      I  G       + NN  
Sbjct: 153 LII-----------QLTDDEKSLWKDLKIEEAIKLARENAKDIIAVGFDVDKTFIFNNLE 201

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++         +  I    + N++        S +  +      +    +   + F+   
Sbjct: 202 FMGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPALSSTFPFIFGN 261

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAI 245
           +   C +     DQ        D+  RL  PK     +   P L  A         + A+
Sbjct: 262 RKLHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALLHSTFFPALQGAKSKMSASETNSAV 320

Query: 246 WLNKEM 251
           +L    
Sbjct: 321 FLTDTP 326


>gi|50289549|ref|XP_447206.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526515|emb|CAG60139.1| unnamed protein product [Candida glabrata]
          Length = 392

 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 19/220 (8%)

Query: 18  IHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP+ +  +  +G  +  Y G   T    H G+   +  L    K G +   L+  
Sbjct: 14  LQEVLNPQIIKDVLKEGRPLKLYWGTAPTGRP-HCGYFVAMTKLAHFLKAGVEVTVLLAD 72

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSI 135
             + +               + +    +  +    + +K           +   ++    
Sbjct: 73  LHAFL--------DNMKAPLEVVNYRTKYYEYTVKAILKSINVPIEKLKFVVGSSYQLGG 124

Query: 136 KYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
            Y   L ++ +  S N        V  ++            Y ++QA D     +  D  
Sbjct: 125 DYTLDLFKLSNMVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDE----QFLDVD 177

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           +Q GG DQ    +   +   R+   K   L +P++   + 
Sbjct: 178 VQFGGVDQRKIFVLAEENLPRIGYKKRAHLMNPMVPGLTQ 217


>gi|328767017|gb|EGF77068.1| hypothetical protein BATDEDRAFT_20842 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 517

 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 72/253 (28%), Gaps = 17/253 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     +    ++  + +   +  Y G   T    H G+   +  +    K G + 
Sbjct: 8   ELITRNLQEHL-GGDKIKEVLATRDLKVYWGTAPTGKP-HIGYFVPMTKVADFLKAGCEV 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + + +     +  ++  S         +  I     K         ++    
Sbjct: 66  TILFADMHAFLDNQKAPWDLLKLRTSYYEATIKSMLTSIGVPIEKLKF------VVGTSY 119

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            L     +D+ R +          +   V  +++           Y +LQA D   L   
Sbjct: 120 QLSKEYSLDVYRLLSMTTEHAAKKAGAEVVKQVESPL---LSGLVYPLLQALDEEYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                Q GG DQ            +L   K   L + ++   SG+KM  +          
Sbjct: 174 -GVDAQFGGVDQRKIFTFAEKFLPQLGYAKRAHLMNVMVGGLSGSKMSSS--DPDSKVDL 230

Query: 251 MTSPYNFWQYWRN 263
           +  P +     + 
Sbjct: 231 LDEPDSVVAKLKK 243


>gi|258574691|ref|XP_002541527.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901793|gb|EEP76194.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 409

 Score = 63.6 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 80/256 (31%), Gaps = 21/256 (8%)

Query: 11  ILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L +      +      D++      +T Y G   T    H G+   ++ L    + G  
Sbjct: 12  DLIKLNLQEVLKPEILEDVIVRQNRPLTIYWGTATTGRP-HCGYFVPIVKLAHFLRAGCH 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML--N 127
              L+      +               + +    +  + + ++ ++     TD L     
Sbjct: 71  IKILLADIHGFL--------DNLKAPIELVNFRADYYRYVITALLEAVHVPTDKLEFVLG 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           +   L +   +DL R        +   +   V  +++           Y ++QA D   L
Sbjct: 123 SSYQLSAKYTMDLFRLSSVVTEHDAKKAGAEVVKQVENAV---LSGLIYPLMQALDEEHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ       ++   R+   +   L +P++   +G KM  + S     
Sbjct: 180 ----GVDAQFGGVDQRKIFTLAMETLPRIGYKERAHLMNPMVPGLAGGKM--SASDPDSK 233

Query: 248 NKEMTSPYNFWQYWRN 263
              + +P    +  R 
Sbjct: 234 IDILDTPDAVKKKLRK 249


>gi|94733607|emb|CAK04285.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 228

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 66/235 (28%), Gaps = 21/235 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNN 128
             L     + +           M    E+ E   K        +    G        +  
Sbjct: 70  TILFADLHAYL---------DNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
                   Q GG DQ             L   K   L +P++   +G+KM  +  
Sbjct: 178 K----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKMSSSEE 228


>gi|34495367|gb|AAQ73504.1| tyrosyl-t-RNA synthetase [Enterococcus hirae]
          Length = 44

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AI IN   +++    I          + +  GKKN+ +  + 
Sbjct: 1   GAISINGDRVTDLNFVIDPSKEFDGKFVVIRKGKKNYFLAKVV 43


>gi|307181468|gb|EFN69060.1| Tyrosyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 522

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 68/235 (28%), Gaps = 21/235 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + +  +L  +  +  +  Y G   T    H G+   +  +    + G +  
Sbjct: 11  LITRNLAEWLGDE-KLKSILKERDLKLYWGTATTGRP-HIGYFAPMCKIADFLRAGVEVT 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++   +  + +  + +K           +    
Sbjct: 69  VLFADLHAYL--------DNMKAPWELLELRTQYYEAVIKAMLKSIDVPLDKLKFVKGTD 120

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           +  S +Y   +  + S  + +       E V+               Y  LQA D   L 
Sbjct: 121 YQLSKEYTLDVYRLSSLVTEHDAKKAGAEVVKQVSNP----LLSGLLYPGLQALDEHHLK 176

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                  Q GG DQ             +   K   L +P++   +G KM  +   
Sbjct: 177 ----IDAQFGGVDQRKIFTFAEKYLPIMGYQKCIHLMNPMIPGLAGAKMSSSEED 227


>gi|315426697|dbj|BAJ48322.1| tyrosyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 363

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 24/248 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH----LTQLMLLFWLQK 65
            L  R    ++  P EL  L        AY G++ +       H    L + + L  + +
Sbjct: 8   ELIMRQPTEEVLTPEELRALLETEASPIAYDGFEPSG----LAHIPFALLRAIKLRDMLE 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G +   L+    + I      D        +  +  +E  K         G   +   +
Sbjct: 64  AGCRFKLLLADWHAAINRKMGGDLE---KIRKVGEYFVEVWKAS-------GIDTSRVEI 113

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +          Y  L+ E+    ++ R+L    +  R + E      +  Y  +Q  D  
Sbjct: 114 VWASDLAADRDYWRLVIEVLQNTTLRRVLRCLPIMGRKEGELQE-AAQLLYPGMQVADIF 172

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L    + ++   G DQ    I   ++G +L   K  A+   +L    G    K L    
Sbjct: 173 KL----EAKICQLGLDQRRANILAREIGPKLGFWKPVAVHHHMLMGLEGPTGPKGLEEEE 228

Query: 246 WLNKEMTS 253
            L+ +++S
Sbjct: 229 NLDIQISS 236


>gi|116201495|ref|XP_001226559.1| hypothetical protein CHGG_08632 [Chaetomium globosum CBS 148.51]
 gi|88177150|gb|EAQ84618.1| hypothetical protein CHGG_08632 [Chaetomium globosum CBS 148.51]
          Length = 388

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 15/224 (6%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ N   +  +  +G     Y G   T    H G+    + +      G     L+  
Sbjct: 17  LAEVLNEEIIKKILDEGQHPKIYWGTATTGRP-HCGYFVPAIKIAQFLAAGCDVTILLAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
               +       ++ +      +         I ++    G       ++   ++  S +
Sbjct: 76  IHGFL-------DNLKAPLELVMHRAEFYRHIIIATLQAIGVSTEKLRVVLGSSYQKSPE 128

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           Y+  + ++ S  S +      +   +      +S     Y ILQ  D   L    DC  Q
Sbjct: 129 YVMDVYKMASLISEHDAKKAGAEVVKQTDNAPMS--GLLYPILQVLDEQYL----DCDAQ 182

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            GG DQ        D   +L   +   L +P++    G KM  +
Sbjct: 183 FGGMDQRKLFTAAKDWLPKLGYRERAHLLNPMVPGLHGGKMSSS 226


>gi|158290282|ref|XP_311880.3| AGAP003003-PA [Anopheles gambiae str. PEST]
 gi|157017819|gb|EAA07816.3| AGAP003003-PA [Anopheles gambiae str. PEST]
          Length = 542

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 88/323 (27%), Gaps = 28/323 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 11  EHLITRNL-QEVLGQDNLRAVLKERDLKIYWGTATTGKP-HIAYFVPMSKVADFLKAGCE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L     + +                 ++E  +  + +  + +   G        +  
Sbjct: 69  VTILFADLHAYL--------DNMKAPWSLLKERTKYYEAVIKAMLTSLGVPLDKLKFVCG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TDYQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---MSGILYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K   L +P++   +G KM  +       
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPQLGYAKRIHLMNPMIPGLAGGKMSSSEED--SK 231

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + S        +       NI+D  ++ F K +      E +     +  +      
Sbjct: 232 IDLLDSAAKVKSKIKKAFCEPGNIEDNGLLKFVKHVVYPMFKEGEAFTVHRKPDFGGDLV 291

Query: 301 IIATEITTMVHGREEAEKAATAA 323
               E        +E       A
Sbjct: 292 FAEYEQLEACFAAQELHPGDLKA 314


>gi|47229479|emb|CAF99467.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 531

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 66/235 (28%), Gaps = 21/235 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKQILQERELKLYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M    E+ E   K        +    G        +   
Sbjct: 71  ILFADLHAYL---------DNMKAPWELLELRVKYYEQVIKAMLESIGVPLEKLKFVKGT 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +  S +Y   +  + S  + +        V  +++           Y  LQA D     
Sbjct: 122 DYQLSREYTLDVYRLSSVVTEHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDE---- 174

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +      Q GG DQ             L   K   L +P++   +G KM  +   
Sbjct: 175 EFLKVDAQFGGVDQRKIFTVAEKYLPSLGYAKRAHLMNPMVPGLTGAKMSSSEEE 229


>gi|195112475|ref|XP_002000798.1| GI22326 [Drosophila mojavensis]
 gi|193917392|gb|EDW16259.1| GI22326 [Drosophila mojavensis]
          Length = 432

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    L ++        Y G   ++ SLH GHL   +L  WLQ+T   P
Sbjct: 94  LIRRGIFFSHRDLHSILTLIEQGKPFYLYTGRGPSSGSLHVGHLVPFILTKWLQETFDVP 153

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  +I+E I   +      +  G       + NN  
Sbjct: 154 LII-----------QLTDDEKTLWKDLKIEEAIRLARENAKDIVAMGFDLNKTFIFNNLE 202

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++     +   +  I    + N++        S +  +      +    +   + F+   
Sbjct: 203 FMGKCPAFYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPALSSTFPFIFGN 262

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           K   C +     DQ        D+  RL  PK   + +   P L  A         + A+
Sbjct: 263 KKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSSFFPALQGAKTKMSASEQNSAV 321

Query: 246 WLNKEM 251
           +L    
Sbjct: 322 FLTDTP 327


>gi|119627913|gb|EAX07508.1| tyrosyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 246

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 70/233 (30%), Gaps = 19/233 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
                 Q GG DQ             L   K   L +P++   +G+KM  +  
Sbjct: 179 ---VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEE 228


>gi|4128224|gb|AAD03560.1| tyrosyl-tRNA synthetase [Drosophila virilis]
          Length = 237

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 66/236 (27%), Gaps = 19/236 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L+ +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 12  KQLITRNL-QETLGEDKLNKVLQERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 69

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLN 127
              L     + +           M     + E   K        +    G        + 
Sbjct: 70  VTILFADLHAYL---------DNMKAPWPLLELRTKYYEQVIKAMLSSIGVPLDKLKFVK 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              +  S +Y   + ++ S  +++      +   +      LS     Y  LQ  D   L
Sbjct: 121 GSDYQLSREYTLDVYKLSSLVTIHDAKKAGAEVVKQVEHPLLSC--LLYPGLQGLDEEYL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                   Q GG DQ            +L   K     +P++   +G KM  +   
Sbjct: 179 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED 230


>gi|325096254|gb|EGC49564.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 437

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 75/255 (29%), Gaps = 19/255 (7%)

Query: 11  ILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L        +      D++      +  Y G   T    H G+   ++ L    + G  
Sbjct: 50  DLIYHNLQEVLKPEIIEDVILRQNRPLKVYFGTATTGRP-HCGYFCPMVKLAHFLRAGCH 108

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L+      +                 +    +  + I ++ ++           +  
Sbjct: 109 VKILLADIHGFL--------DNLKAPIDLVNFRAKYYRYIITALLEAIHVPIDKLEFVLG 160

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +  S +Y   L  + S  + +      +   +      LS     Y ++QA D   L 
Sbjct: 161 SDYQLSSRYTMDLFRLSSVVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL- 217

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              D   Q GG DQ       ++   R+   +   L SP++   +G KM  + S      
Sbjct: 218 ---DVDAQFGGVDQRKIFTLALETLPRVGYKERAHLMSPMVPGLAGGKM--SASDPDSKI 272

Query: 249 KEMTSPYNFWQYWRN 263
             +  P    +  + 
Sbjct: 273 DILDMPEVVKKKLKK 287


>gi|240278193|gb|EER41700.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 437

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 75/255 (29%), Gaps = 19/255 (7%)

Query: 11  ILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L        +      D++      +  Y G   T    H G+   ++ L    + G  
Sbjct: 50  DLIYHNLQEVLKPEIIEDVILRQNRPLKVYFGTATTGRP-HCGYFCPMVKLAHFLRAGCH 108

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L+      +                 +    +  + I ++ ++           +  
Sbjct: 109 VKILLADIHGFL--------DNLKAPIDLVNFRAKYYRYIITALLEAIHVPIDKLEFVLG 160

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +  S +Y   L  + S  + +      +   +      LS     Y ++QA D   L 
Sbjct: 161 SDYQLSSRYTMDLFRLSSVVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL- 217

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              D   Q GG DQ       ++   R+   +   L SP++   +G KM  + S      
Sbjct: 218 ---DVDAQFGGVDQRKIFTLALETLPRVGYKERAHLMSPMVPGLAGGKM--SASDPDSKI 272

Query: 249 KEMTSPYNFWQYWRN 263
             +  P    +  + 
Sbjct: 273 DILDMPEVVKKKLKK 287


>gi|154274950|ref|XP_001538326.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150414766|gb|EDN10128.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 399

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 17/232 (7%)

Query: 11  ILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L        +      D++      +  Y G   T    H G+   ++ L    + G  
Sbjct: 12  DLIYHNLQEVLKPEIIEDVILRQNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLRAGCH 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L+      +                 +    +  + + ++ ++           +  
Sbjct: 71  VKILLADIHGFL--------DNLKAPIDLVNFRAKYYRYVITALLEAIHVPIDKLEFVLG 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +  S +Y   L  + S  + +      +   +      LS     Y ++QA D   L 
Sbjct: 123 SDYQLSSRYTMDLFRLSSVVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL- 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
              D   Q GG DQ       ++   R+   +   L SP++   +G KM  +
Sbjct: 180 ---DVDAQFGGVDQRKIFTLALETLPRVGYKERAHLMSPMVPGLAGGKMSAS 228


>gi|255711326|ref|XP_002551946.1| KLTH0B03608p [Lachancea thermotolerans]
 gi|238933324|emb|CAR21508.1| KLTH0B03608p [Lachancea thermotolerans]
          Length = 405

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 73/228 (32%), Gaps = 21/228 (9%)

Query: 11  ILSERGFIHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  +    ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G 
Sbjct: 16  ELITKNL-QEVLNPQIIKNVLEVEKRPLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGC 73

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
           +   L+    + +               + ++   +  + +  S ++           + 
Sbjct: 74  EVRVLLADLHAFL--------DNMKAPLEVVKYRAKYYECVIKSLLRSINVPIEKLDFVV 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             ++  S +Y   + +I +  S N        V  ++            Y ++QA D   
Sbjct: 126 GSSYQLSSEYTMDIFKISNVVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEH 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           L       +Q GG DQ    +   +    L   K   L +P++   + 
Sbjct: 183 L----GVDVQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLTQ 226


>gi|307595853|ref|YP_003902170.1| tyrosyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551054|gb|ADN51119.1| tyrosyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 374

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 104/350 (29%), Gaps = 29/350 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHK 69
           L  R    ++    EL      G  +  YIG++++   +H G  +  L  +  LQ+ G +
Sbjct: 9   LITRYPTEEVLTVDELRQYLETGAKLKHYIGFEISG-YIHIGTGIVSLSKVVDLQRAGIE 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    S + +    D       +             F   I+   G  D +     
Sbjct: 68  VSILLADVHSWLNNKLGGDLELIRKVAN------RYYVETFKKAIEVLGGDPDNVKFYMA 121

Query: 130 T--WLCSIKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVE 186
           +  +  + +Y  L+ ++    ++  +    ++   ++     +S+    Y +LQ  D   
Sbjct: 122 SDLYHNNDEYWYLILDLARMTNLADIRHSLTILGRKMGESIPMSW--LVYPLLQVADVFV 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           +       +  GG DQ    +   ++  R++   L      +L       +    S    
Sbjct: 180 I----GSHIAHGGIDQRKAYVLAREVALRVRFYPL------MLNNEKVKPIALFHSLIPA 229

Query: 247 LN-KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           LN     S     +   +    D   F           I +          E K     E
Sbjct: 230 LNITGKESKEELSEMKMSKSLPDTAIFLHD----SAEAIRQKILKAYCPPRETKMNPVIE 285

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           +  +   RE  +K               +      + K      +  L L
Sbjct: 286 LAHLFSFRERRDKPFIIERPQQYGGGRLEFWTFDELVKAYTEGKIHPLDL 335


>gi|325967718|ref|YP_004243910.1| tyrosyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323706921|gb|ADY00408.1| tyrosyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 374

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/349 (12%), Positives = 102/349 (29%), Gaps = 27/349 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHK 69
           L  R    ++    EL      G  +  YIG++++   +H G  +  L  +  LQK G +
Sbjct: 9   LITRYPTEEVLTVDELRQYLETGARLKHYIGFEISG-YIHIGTGIVSLSKVVDLQKAGVE 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    S + +    D       +             F   I+   G  D +     
Sbjct: 68  VSILLADIHSWLNNKLGGDLELIRRVAN------RYYVETFRKVIEVLGGDPDNVRFYMA 121

Query: 130 T--WLCSIKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVE 186
           +  +  +  Y  L+ ++    ++  +    ++   ++     +S+    Y +LQ  D   
Sbjct: 122 SDLYHNNDDYWYLILDLARMTNMADIRHSLTILGRKMGESVPMSW--LVYPLLQVADVFV 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           +       +  GG DQ    +   ++  +++               +  K+         
Sbjct: 180 I----GSHIAHGGIDQRKAYVLAREVALKVRFYP---------LMLNNEKVKPIALFHSL 226

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           +     +     +    +  +  +          +  + +          E +     E+
Sbjct: 227 IPALNITGKESREELSEMKMSKSLPDTAIFLHDSVEAVRQKILKAYCPPREVQMNPVIEL 286

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             +   RE  +K               +      ++K      +  L L
Sbjct: 287 AHLFSFRERRDKPFIIKRPQQYGGGQLEFWSFNELTKAYTEGKIHPLDL 335


>gi|225557549|gb|EEH05835.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 397

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 77/255 (30%), Gaps = 19/255 (7%)

Query: 11  ILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L        +      D++      +  Y G   T    H G++  ++ L    + G  
Sbjct: 12  DLIYHNLQEVLKPEIIEDVILRQNRPLKVYFGTATTGRP-HCGYICPMVKLAHFLRAGCH 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L+      +                 +    +  + I ++ ++           +  
Sbjct: 71  VKILLADIHGFL--------DNLKAPIDLVNFRAKYYRYIITALLEAIHVPIDKLEFVLG 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +  S +Y   L  + S  + +      +   +      LS     Y ++QA D   L 
Sbjct: 123 SDYQLSSRYTMDLFRLSSVVTEHDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL- 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              D   Q GG DQ       ++   R+   +   L SP++   +G KM  + S      
Sbjct: 180 ---DVDAQFGGVDQRKIFTLAMETLPRVGYKERAHLMSPMVPGLAGGKM--SASDPDSKI 234

Query: 249 KEMTSPYNFWQYWRN 263
             + +P    +  + 
Sbjct: 235 DILDAPEVVKKKLKK 249


>gi|156547838|ref|XP_001602505.1| PREDICTED: similar to GA18259-PA [Nasonia vitripennis]
          Length = 524

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 93/315 (29%), Gaps = 26/315 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + +  +L  +  Q  +  Y G   T    H G+ T +  +    + G +  
Sbjct: 12  LITRNLGEWLGDE-KLKTILKQRDLKVYWGTATTGKP-HIGYFTPMSKIADFLRAGVEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++   +  + +  + ++           +    
Sbjct: 70  ILFADLHAYL--------DNMKAPWELLELRTQYYEAVIKAMLRSIDVPLEKLKFIKGSD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           +  S +Y   +  + S  + +       E V+               Y  LQA D   L 
Sbjct: 122 YQLSKEYTLDMYRLSSVVTEHDAKKAGAEVVKQVANP----LLSGLLYPGLQALDEEYLK 177

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWL 247
                  Q GG DQ             L   K   L +P++   +G KM  +   + I L
Sbjct: 178 ----VDAQFGGVDQRKIFTFAEKYLPALGYEKRIHLMNPMIPGLAGAKMSSSEEDSKIDL 233

Query: 248 NKEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
                S     +        I D  ++SF+K +    M E ++    +  E         
Sbjct: 234 LDNAASVKKKLKKAFCEPGNITDNGLLSFSKSVLFPLMKEGEKYLVPRAAEFGGDAIFEN 293

Query: 304 TEITTMVHGREEAEK 318
            E       ++E   
Sbjct: 294 YEELEAAFAKQEIHP 308


>gi|169600493|ref|XP_001793669.1| hypothetical protein SNOG_03082 [Phaeosphaeria nodorum SN15]
 gi|111068693|gb|EAT89813.1| hypothetical protein SNOG_03082 [Phaeosphaeria nodorum SN15]
          Length = 449

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 70/230 (30%), Gaps = 16/230 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +      ++     + L   G +  Y G   T    H G+   ++ +      G    
Sbjct: 53  LIKVNLQEVLNPEIMEEALKKNGHLKVYWGTATTGRP-HCGYFVPILKIAQFLSAGCHVK 111

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L+      +               + ++   E  +    + +K           +   +
Sbjct: 112 VLLADIHGFL--------DNLKAPIELVKYRAEYYRYTIRALLKAVNVPIEKLEFVLGSS 163

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  S  Y+  +  + S  S        +   +      LS     Y ++QA D   L   
Sbjct: 164 FELSPDYMMDMLRLASTTSERDAKKAGAEVVKQTENAPLS--GLLYPLMQALDEQYL--- 218

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            D  +Q GG DQ        +   +L   +   L +P++    G KM  +
Sbjct: 219 -DVDVQFGGVDQRKIFALAKEALPKLGYKERAHLMNPMVPGLQGGKMSAS 267


>gi|194749165|ref|XP_001957010.1| GF10209 [Drosophila ananassae]
 gi|190624292|gb|EDV39816.1| GF10209 [Drosophila ananassae]
          Length = 525

 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 87/295 (29%), Gaps = 32/295 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M     + E   +        +    G        +   
Sbjct: 70  ILFADLHAYL---------DNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEKLKFVKGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   + ++ S  + +       E V+     E  L      Y  LQA D   L
Sbjct: 121 DYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
              + SP N  +  +       NI D  ++SF K +      E +     +G E 
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNRGAEH 285


>gi|109895056|sp|Q6TGS6|SYYC_DANRE RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|50370114|gb|AAH76558.1| Tyrosyl-tRNA synthetase [Danio rerio]
 gi|94732109|emb|CAK04465.1| tyrosyl-tRNA synthetase [Danio rerio]
 gi|158254328|gb|AAI54289.1| Yars protein [Danio rerio]
 gi|182890550|gb|AAI64691.1| Yars protein [Danio rerio]
          Length = 529

 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/412 (14%), Positives = 111/412 (26%), Gaps = 62/412 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNN 128
             L     + +           M    E+ E   K        +    G        +  
Sbjct: 70  TILFADLHAYL---------DNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IW 246
                   Q GG DQ             L   K   L +P++   +G+KM  +   + I 
Sbjct: 178 K----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKMSSSEEESKID 233

Query: 247 LNKEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN------ 296
           L  +        +        +++  V+SF K +     SE       +           
Sbjct: 234 LLDKNQDVKKKLKKAFCEPGNVENNGVLSFVKHVLFPLHSEFVIKRDPKFGGDKVYTDFE 293

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E +K  A E       +   E A    ++       S  +  ++ S              
Sbjct: 294 EVEKDFAAEQIHPGDLKASVELALNKLLDPIRKKFESPELKKLTSSAYP----------- 342

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
                  S            +K N    +++   I  +       + +  GK
Sbjct: 343 -----EPSK-------NKGGVKGNPKQTTDDDEVIPSR-------LDIRVGK 375


>gi|195572333|ref|XP_002104150.1| GD20809 [Drosophila simulans]
 gi|194200077|gb|EDX13653.1| GD20809 [Drosophila simulans]
          Length = 430

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 79/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L +         Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 92  FIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 151

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 152 LVI-----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAMGFDVNKTFIFNNLE 200

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++         +  I    + N++        S +  +      +    I   + F+   
Sbjct: 201 FVGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGN 260

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           +   C +     DQ        D+  RL  PK   + +   P L  A         + A+
Sbjct: 261 RKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAV 319

Query: 246 WLNKEM 251
           +L    
Sbjct: 320 FLTDTP 325


>gi|194903336|ref|XP_001980850.1| GG17386 [Drosophila erecta]
 gi|190652553|gb|EDV49808.1| GG17386 [Drosophila erecta]
          Length = 430

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 80/251 (31%), Gaps = 28/251 (11%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L +         Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 92  FIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 151

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 152 LVI-----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAMGFDVNKTFIFNNLE 200

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AYD 183
           ++             +   + + ++F  V+       S    +  +   Q        + 
Sbjct: 201 FVGK-----CPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFP 255

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT 240
           F+   K   C +     DQ        D+  RL  PK   + +   P L  A        
Sbjct: 256 FIFGNKKVHCLIPC-AIDQDPYFRMTRDVAPRLGYPKCALIHSTFFPALQGAKTKMSASD 314

Query: 241 LSGAIWLNKEM 251
            + A+++    
Sbjct: 315 QNSAVYMTDTP 325


>gi|312214261|emb|CBX94254.1| hypothetical protein [Leptosphaeria maculans]
          Length = 450

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 73/241 (30%), Gaps = 25/241 (10%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M   K +   +L          NP  +D    + G +  Y G   T    H G+   ++ 
Sbjct: 53  MALIKVNLAEVL----------NPEIMDEALKKQGHLKVYWGTATTGRP-HCGYFVPILK 101

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +      G     L+      + D    +    +   +   E            +K    
Sbjct: 102 IAQFLAAGCHVKILLADIHGFL-D----NLKAPIELVKFRAEYYRYTIRALLKAVKVPID 156

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K + ++ ++           L     +  S  +    E V+               Y ++
Sbjct: 157 KLEFVLGSSYELNADYTMDLLRLASITSESAAKKAGAEVVKQTENAP----LSGLIYPLM 212

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA D   L    D  +Q GG DQ        D+  ++   +   L +P++    G KM  
Sbjct: 213 QALDEQYL----DVDVQFGGVDQRKIFALAKDVLPKIGYKERAHLMNPMVPGLQGGKMSA 268

Query: 240 T 240
           +
Sbjct: 269 S 269


>gi|328781741|ref|XP_001123290.2| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic [Apis
           mellifera]
          Length = 373

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 33/266 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L++         Y G   ++ S+H GHL   M   WLQ   H P+ +             
Sbjct: 74  LNLYEQGKPFYLYTGRGPSSDSMHLGHLIPFMFCKWLQDVFHVPLVI-----------QL 122

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + ++ +I++ I+         I  G    +  + +N          +      +
Sbjct: 123 TDDEKAIWKNIKIEDAIKLSYNNAKDIIALGFKPENTFIFSNLE-----HIGNNPAFYQN 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AYDFVELAKNYDCRLQMGG 199
              + R ++F  V+       S    + ++   Q        + F+      +C +    
Sbjct: 178 MIRIQRSVTFNQVKGIFGFGDSDPIGKISFPPTQAAPAISGTFPFIFKDAKVNCLIPC-A 236

Query: 200 SDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGK-----TLSGAIWLNKEM 251
            DQ        D+  ++  PK     ++  P L  +                 +  N  +
Sbjct: 237 IDQDPYFRMTRDIAPKIGYPKPALLHSIFFPALQGSKTKMSASGQATVEEHRQLGGNCNI 296

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLT 277
              Y + +++ + DD  +    K  T
Sbjct: 297 DIAYQWLRFFLD-DDEKLEQLRKDYT 321


>gi|17864462|ref|NP_524826.1| Tryptophanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|24645295|ref|NP_731327.1| Tryptophanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|7299154|gb|AAF54352.1| Tryptophanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|10726403|gb|AAG22136.1| Tryptophanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|201065817|gb|ACH92318.1| FI06027p [Drosophila melanogaster]
          Length = 430

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 79/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L +         Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 92  FIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 151

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 152 LVI-----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLE 200

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++         +  I    + N++        S +  +      +    I   + F+   
Sbjct: 201 FVGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGN 260

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           +   C +     DQ        D+  RL  PK   + +   P L  A         + A+
Sbjct: 261 RKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAV 319

Query: 246 WLNKEM 251
           +L    
Sbjct: 320 YLTDTP 325


>gi|297172371|gb|ADI23346.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0770_27O18]
          Length = 173

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 12/182 (6%)

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS--EIDRMAKLQGKE 294
           M K+L   + +N    +P   ++   +I D     + + L+ L     E  +    +   
Sbjct: 1   MSKSLKNYVGVN---DAPGEMYRKLLSIPDDMTWRYYELLSGLSNEALEERKAEAERLGS 57

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             EAKK  A E+ T  HG   A+ A ++A     +     ++P +     E    + ++ 
Sbjct: 58  PQEAKKAFALEMVTRFHGEAAAQAAPSSAGNLTALGAIPDNVPEVE-VVLEEGDEVHVVP 116

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  AG A +   A+      A+ ++   ++ E+       F    +  +  GKK     
Sbjct: 117 LLRLAGLAQNGKAAKDVFGRGAVYVDGQQLTEERT------FARGESAVIQAGKKKIARV 170

Query: 415 HL 416
            +
Sbjct: 171 TI 172


>gi|6636388|gb|AAF20167.1|AF125157_1 tryptophanyl-tRNA synthetase [Drosophila melanogaster]
          Length = 420

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 79/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L +         Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 82  FIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 141

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 142 LVI-----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLE 190

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++         +  I    + N++        S +  +      +    I   + F+   
Sbjct: 191 FVGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGN 250

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           +   C +     DQ        D+  RL  PK   + +   P L  A         + A+
Sbjct: 251 RKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAV 309

Query: 246 WLNKEM 251
           +L    
Sbjct: 310 YLTDTP 315


>gi|6636386|gb|AAF20166.1|AF125156_1 tryptophanyl-tRNA synthetase [Drosophila melanogaster]
 gi|18447050|gb|AAL68116.1| AT21437p [Drosophila melanogaster]
          Length = 430

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 79/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L +         Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 92  FIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 151

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 152 LVI-----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLE 200

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++         +  I    + N++        S +  +      +    I   + F+   
Sbjct: 201 FVGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGN 260

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           +   C +     DQ        D+  RL  PK   + +   P L  A         + A+
Sbjct: 261 RKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAV 319

Query: 246 WLNKEM 251
           +L    
Sbjct: 320 YLTDTP 325


>gi|195330470|ref|XP_002031926.1| GM26274 [Drosophila sechellia]
 gi|194120869|gb|EDW42912.1| GM26274 [Drosophila sechellia]
          Length = 430

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L +         Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 92  FIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 151

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 152 LVI-----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAMGFDVNKTFIFNNLE 200

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++         +  I    + N++        S +  +      +    I   + F+   
Sbjct: 201 FVGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGN 260

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           +   C +     DQ        D+  RL  PK   + +   P L  A        L+ A+
Sbjct: 261 RKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDLNSAV 319

Query: 246 WLNKEM 251
           +L    
Sbjct: 320 FLTDTP 325


>gi|330946850|ref|XP_003306810.1| hypothetical protein PTT_20053 [Pyrenophora teres f. teres 0-1]
 gi|311315509|gb|EFQ85089.1| hypothetical protein PTT_20053 [Pyrenophora teres f. teres 0-1]
          Length = 453

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 75/242 (30%), Gaps = 27/242 (11%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M   K +   +L          NP  +D    + G +  Y G   T    H G+   ++ 
Sbjct: 57  MALIKVNLAEVL----------NPEIMDEALKKQGHLKVYWGTATTGRP-HCGYFVPILK 105

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGT 118
           L      G     L+      +               + ++   E  +   ++ +K    
Sbjct: 106 LAQFLAAGCHVKILLADIHGFL--------DNLKAPIELVKFRAEYYRFTITALLKAVKV 157

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                  +   ++  +  Y   L  + S  S        +   +      LS     Y +
Sbjct: 158 PIDKLEFVLGSSYELNADYTMDLLRLASITSEAAAKKAGAEVVKQTENAPLS--GLIYPL 215

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           +QA D   L    D  +Q GG DQ        D+  ++   +   L +P++    G KM 
Sbjct: 216 MQALDEQYL----DVDVQFGGVDQRKIFALAKDVLPKIGYKERAHLMNPMVPGLQGGKMS 271

Query: 239 KT 240
            +
Sbjct: 272 AS 273


>gi|195499364|ref|XP_002096918.1| GE24790 [Drosophila yakuba]
 gi|194183019|gb|EDW96630.1| GE24790 [Drosophila yakuba]
          Length = 430

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 28/251 (11%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L +         Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 92  FIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 151

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 152 LVI-----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAMGFDVNKTFIFNNLE 200

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AYD 183
           ++             +   + + ++F  V+       S    +  +   Q        + 
Sbjct: 201 FVGK-----CPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFP 255

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKT 240
           F+   K   C +     DQ        D+  RL  PK     +   P L  A        
Sbjct: 256 FIFGNKKVHCLIPC-AIDQDPYFRMTRDVAPRLGYPKCALMHSTFFPALQGAKTKMSASD 314

Query: 241 LSGAIWLNKEM 251
            + A++L    
Sbjct: 315 QNSAVYLTDTP 325


>gi|189191994|ref|XP_001932336.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187973942|gb|EDU41441.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 453

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 74/242 (30%), Gaps = 27/242 (11%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLML 59
           M   K +   +L          NP  +D    +   +  Y G   T    H G+   ++ 
Sbjct: 57  MALIKVNLAEVL----------NPEIMDEALKKKGHLKVYWGTATTGRP-HCGYFVPILK 105

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGT 118
           L      G     L+      +               + ++   E  +   ++ +K    
Sbjct: 106 LAQFLAAGCHVKILLADIHGFL--------DNLKAPIELVKFRAEYYRFTITALLKAVKV 157

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                  +   ++  +  Y   L  + S  S        +   +      LS     Y +
Sbjct: 158 PIDKLEFVLGSSYELNADYTMDLLRLASITSEAAAKKAGAEVVKQTENAPLS--GLIYPL 215

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           +QA D   L    D  +Q GG DQ        D+  ++   +   L +P++    G KM 
Sbjct: 216 MQALDEQYL----DVDVQFGGVDQRKIFALAKDVLPKIGYKERAHLMNPMVPGLQGGKMS 271

Query: 239 KT 240
            +
Sbjct: 272 AS 273


>gi|213419416|ref|ZP_03352482.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 125

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRG 349
             A+ ++A ++T +VHG E    A       F  S+        + +    +   E+ +G
Sbjct: 3   PRAQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKG 62

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             L+  +V A    S  +AR+ + SNA+ IN   
Sbjct: 63  ADLMQALVDAELQPSRGQARKTIASNAVTINGEK 96


>gi|195394551|ref|XP_002055906.1| GJ10514 [Drosophila virilis]
 gi|194142615|gb|EDW59018.1| GJ10514 [Drosophila virilis]
          Length = 430

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 77/230 (33%), Gaps = 17/230 (7%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L +         Y G   ++ SLH GHL   ++  WLQ+T + P+ +             
Sbjct: 108 LTLHEQGKPFYLYTGRGPSSGSLHMGHLVPFIMTKWLQETFNVPLII-----------QL 156

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIG 145
            D+ + + +  +I+E I+  +      +  G       + NN  ++         +  I 
Sbjct: 157 TDDEKTLWKDLKIEEAIKLARENAKDIVAMGFDLNKTFIFNNLEFMGKCPALYQNIIRIQ 216

Query: 146 SFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
              + N++        S +  +      +    +   + F+   K   C +     DQ  
Sbjct: 217 KCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPALSSTFPFIFGNKKVHCLIPC-AIDQDP 275

Query: 205 NIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                 D+  RL  PK   + +   P L  A         + A++L    
Sbjct: 276 YFRMTRDVAPRLGFPKCALIHSSFFPALQGAKTKMSASEQNSAVFLTDTP 325


>gi|302908936|ref|XP_003049962.1| hypothetical protein NECHADRAFT_71656 [Nectria haematococca mpVI
           77-13-4]
 gi|256730899|gb|EEU44249.1| hypothetical protein NECHADRAFT_71656 [Nectria haematococca mpVI
           77-13-4]
          Length = 394

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 76/260 (29%), Gaps = 22/260 (8%)

Query: 12  LSER-GFI----HQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + ER G I     ++ NP  ++ + ++G     Y G   T    H G+L   M +     
Sbjct: 6   IEERLGLIRENLAEVLNPEIIESIMAEGRHPKIYWGTATTGRP-HCGYLVPAMKIAQFLA 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G     L+      + D           R+   +  I  +       I        +  
Sbjct: 65  AGCDVTILLADVHGFL-DNLKAPLELVAQRANYYRFVITSMLKAVGVPIDKLRFVLGSSY 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             +  +   +                +    E V+               Y ILQ  D  
Sbjct: 124 QTSSDYTMDV----YKLTALVSEHDAKKAGAEVVKQTSNAP----LSGLIYPILQVLDEQ 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L    DC  Q GG DQ        +   +L   +   L +P++   +G KM  +     
Sbjct: 176 YL----DCDAQFGGVDQRKLFTAAKEWLPKLGYRQRAHLLNPMVAGLNGNKMSSSDEN-- 229

Query: 246 WLNKEMTSPYNFWQYWRNID 265
                + SP    +  R  +
Sbjct: 230 SKIDLLDSPEAVAKKIRKAE 249


>gi|195135639|ref|XP_002012240.1| GI16545 [Drosophila mojavensis]
 gi|193918504|gb|EDW17371.1| GI16545 [Drosophila mojavensis]
          Length = 528

 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/323 (12%), Positives = 89/323 (27%), Gaps = 28/323 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L  +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 12  KKLITRNL-QETLGDDKLTKILQERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 69

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
              L     + +                 ++   +  + +  + ++           +  
Sbjct: 70  VTILFADLHAYL--------DNMKAPWPLLELRTKYYEQVIKAMLRSIDVPLDKLKFVKG 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   + ++ S  +++        V  +++           Y  LQ  D   L
Sbjct: 122 SDYQLSKEYTLDVYKLSSLVTIHDAKKAGAEVVKQVEFPL---LSCLLYPGLQGLDEEYL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +       
Sbjct: 179 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEED--SK 232

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      + +     +  +      
Sbjct: 233 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKDGEGFEINRAADNGGDIT 292

Query: 301 IIATEITTMVHGREEAEKAATAA 323
                     +   +       A
Sbjct: 293 FYQYSELEQYYADNKLHPGDLKA 315


>gi|328785023|ref|XP_397348.4| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic isoform 1 [Apis
           mellifera]
          Length = 522

 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 21/236 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     + +  +L  +  Q  +  Y G   T    H G+ T +  +    K+G + 
Sbjct: 11  ELITRNLAEWLGDE-KLKSILKQRDLKLYWGTATTGKP-HIGYFTPMSKIADFLKSGAEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L     + +               + ++   +  + +  + ++           +   
Sbjct: 69  TILFADLHAYL--------DNMKAPWELLELRTQYYEKVIKAMLRSIDVPLEKLKFVKGT 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSF--ESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   +  + S  + +       E V+  +            Y  LQA D   L
Sbjct: 121 DYQLSKEYTLDVYRLSSIVTEHDAKKAGAEVVKQVVNP----LLSGLLYPGLQALDEQYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                   Q GG DQ             L   K   L +P++   +G+KM  +   
Sbjct: 177 K----VDAQFGGIDQRKIFTFSEKYLPLLGYEKCIHLMNPMIPGLAGSKMSSSEED 228


>gi|226292185|gb|EEH47605.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 384

 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 16/210 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +  Y G   T    H G+   ++ L    + G     L+      +          
Sbjct: 34  QNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLQAGCHVKILLADIHGFL--------DN 84

Query: 92  RMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                  +    E  + + ++ ++           +    +  S +Y   L  + S  + 
Sbjct: 85  LKAPINLVNYRAEYYRYVITALLEAIHVPIEKLEFVLGSDYQLSARYTMDLFRLSSVVTE 144

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +      +   +      LS     Y ++QA D   L    D   Q GG DQ       +
Sbjct: 145 HDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL----DVDAQFGGVDQRKIFALAL 198

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   R+   +   L +P++   +G KM  +
Sbjct: 199 DTLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|18312057|ref|NP_558724.1| tyrosyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74565500|sp|Q8ZYT7|SYY1_PYRAE RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|18159484|gb|AAL62906.1| tyrosyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 372

 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 93/293 (31%), Gaps = 23/293 (7%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGG 77
             I+     ++L     +  YIG++++   +H G     M  +  LQ+ G +   L+   
Sbjct: 17  EVITVEELRELLQLGHQLNHYIGFEISG-FIHIGTGIVSMSKVVDLQRAGVRTQILLADI 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET-WLCSIK 136
            S + +    D     +R   +   IE  K +  +    G        +     +  + +
Sbjct: 76  HSWLNNKLGGD--LDTIRKVAVTYYIEAFKKVIETL---GGDPDATRFVLGSDLYHHNDE 130

Query: 137 YIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
           Y  LL +I    +++++    ++   ++     L++    Y  LQ  D   L       +
Sbjct: 131 YWLLLMDITRHLTLSQVRHSLTILGRKMGESIPLAY--LVYPPLQVADVFAL----GAHI 184

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
             GG DQ    I    + ++++         PL       K        +      T P 
Sbjct: 185 PHGGVDQRRAHILARQVADKIRF-------YPLEVGGKRVKPVALHHKLLPALNISTKPS 237

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           N  +         V   A  +      EI +          E +     E+  
Sbjct: 238 NKEELSEMKMSKSVPQSAIFI-HDSPEEIRQKISKAYCPPRETEYNPVLELLH 289


>gi|331242259|ref|XP_003333776.1| tyrosyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309312766|gb|EFP89357.1| tyrosyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 428

 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 80/268 (29%), Gaps = 27/268 (10%)

Query: 1   MPAFKSDFLS-----ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M    S+ LS      L  R     + +   L +   +G V        T    H G+  
Sbjct: 1   MSTTTSETLSATERYELITRNLGEVLGSQELLKLCQEEGRVI-------TCYWAHIGYFV 53

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +    + G +   L+    + +       ++ +       Q        + + F  
Sbjct: 54  PLTKIADFLRAGVRVKVLLADVHAFL-------DNLKAPLELINQRVSYYSHILRAVFTS 106

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
            G        +   ++  S  Y     ++ S  S        S   +      LS     
Sbjct: 107 IGVPIDRLEFITGSSYQYSTPYNKDCLKLASLVSERDARKAGSEVVKESDAPPLS--GLL 164

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y +LQA D   L        Q GG DQ            RL   K   L + ++   +GT
Sbjct: 165 YPLLQALDEEYLK----VDFQFGGIDQRKIFTFAELYLPRLGYAKRIHLMNTMVPGLTGT 220

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           KM  +   A      + SP    +  ++
Sbjct: 221 KMSSS--DAKSKIDFLDSPEEVKKKIKD 246


>gi|225681113|gb|EEH19397.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 411

 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 16/210 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +  Y G   T    H G+   ++ L    + G     L+      +          
Sbjct: 34  QNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLQAGCHVKILLADIHGFL--------DN 84

Query: 92  RMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                  +    E  + + ++ ++           +    +  S +Y   L  + S  + 
Sbjct: 85  LKAPIDLVNYRAEYYRYVITALLEAIHVPIEKLEFVLGSDYQLSARYTMDLFRLSSVVTE 144

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +      +   +      LS     Y ++QA D   L    D   Q GG DQ       +
Sbjct: 145 HDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL----DVDAQFGGVDQRKIFALAL 198

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   R+   +   L +P++   +G KM  +
Sbjct: 199 DTLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|170107171|ref|XP_001884796.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640358|gb|EDR04624.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 383

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 69/255 (27%), Gaps = 22/255 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R    ++     +  + ++G     Y G   T    H G+   L  +      G  
Sbjct: 9   ELITRRL-QEVLGGDSIKAILAEGRHPKCYWGTAPTGRP-HIGYFVPLTKIADFLNAGVH 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +       ++ +              + + + F   G   +    +   
Sbjct: 67  VTILLADVHAFL-------DNLKAPLELVEHRTQYYQRLLTTVFTSLGIPTSKLKFVQGS 119

Query: 130 TW--LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           ++         +            +    E V+               Y  LQA D   L
Sbjct: 120 SYQLTKEYNLDNYKLCAIVSEHDAKKAGAEVVKQVESP----LLSGLLYPGLQALDEQYL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
               D   Q GG DQ            RL   K   L + ++   +G KM  + S     
Sbjct: 176 ----DVDFQFGGVDQRKIFTFAELYLPRLGYAKRAHLMNTMVPGLAGGKM--SASDPNSK 229

Query: 248 NKEMTSPYNFWQYWR 262
              + SP    +  +
Sbjct: 230 IDFLDSPEVVKKKLK 244


>gi|325118084|emb|CBZ53635.1| putative tyrosyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 948

 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 109/262 (41%), Gaps = 68/262 (25%)

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---------- 168
               A ++ N  WL  +  +D L E G++ S+ R+LS  SV   L               
Sbjct: 389 KPPPATIVENRAWLGGLSSLDFLTEFGAYLSLPRLLSRSSVEETLGPCLPARNTPTRSGD 448

Query: 169 -------------LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
                         SF    Y +LQA D+  L +      Q+GG DQWGNI  G++L  R
Sbjct: 449 AGAQPQKAASKANFSFASLAYSVLQAVDWSFLRRRLGVVGQVGGGDQWGNIATGLELARR 508

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLS--------------------------------- 242
               +LF +T+PLL   SG KMGK+ S                                 
Sbjct: 509 RDNARLFGITTPLLLHRSGVKMGKSGSPGGTGTRTGTDSAFRRGDEGEGGRVDESRRGHS 568

Query: 243 --------GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA----KL 290
                     +WL K++T P  FWQ+WRN+DD DV    +  T L + EID +       
Sbjct: 569 TLPKSPGGKTVWLRKDLTPPVEFWQHWRNVDDGDVRRLLRWFTLLSVPEIDALEEDTRHC 628

Query: 291 QGKEINEAKKIIATEITTMVHG 312
             + +N  K+++A  +TT+VHG
Sbjct: 629 GERGLNYLKEVLADHVTTLVHG 650



 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH-KPISLMGGG 77
              +  R+ +       ++ Y+G DLT  SLH GHL  L+LL  LQ     +P+ L+G  
Sbjct: 210 QDATAGRDGEDASCDQPLSFYLGIDLTGRSLHIGHLLPLLLLRRLQCLQLVRPVILLGTA 269

Query: 78  TSIIGDPSFR 87
           T+++GDP+ +
Sbjct: 270 TTLVGDPTGK 279



 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 367 EARRHLKSNAIKINNSIIS-NEKLQIKLQDFDS 398
            ARR +    ++IN   +  + ++ + L DF+ 
Sbjct: 801 AARRLIAQGTVRINGKKLQADGEVALALADFEE 833


>gi|170042480|ref|XP_001848952.1| tyrosyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167866028|gb|EDS29411.1| tyrosyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 526

 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 72/245 (29%), Gaps = 19/245 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++    L  R    ++     +  +  +  +  Y G   T    H  +   +  +
Sbjct: 1   MTALTAEEKEQLIVRNL-QEVLGQDAMRGVLKERDLRIYWGTATTGKP-HIAYFVPMSKV 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTG 119
               K G +   L     + +                 +QE  +  + +  + +   G  
Sbjct: 59  ADFLKAGCEVTILFADLHAYL--------DNMKAPWSLLQERTKYYEAVIKAMLTSLGVP 110

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMI 178
                 +    +  S +Y   +  + S  + +        V  +++           Y  
Sbjct: 111 LEKLKFVRGTDYQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---MSGILYPG 167

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQA D   L        Q GG DQ            +L   K   L +P++   +G KM 
Sbjct: 168 LQALDEEYLK----VDAQFGGVDQRKIFTFAEKYLPQLGYGKRVHLMNPMIPGLAGGKMS 223

Query: 239 KTLSG 243
            +   
Sbjct: 224 SSEED 228


>gi|295673472|ref|XP_002797282.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282654|gb|EEH38220.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 410

 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 16/210 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +  Y G   T    H G+   ++ L    + G     L+      +          
Sbjct: 34  QNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLQAGCHVKILLADIHGFL--------DN 84

Query: 92  RMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                  +    E  + + ++ ++           +    +  S +Y   L  + S  + 
Sbjct: 85  LKAPIDLVNYRAEYYRYVITALLEAIHVPIEKLEFVLGSDYQLSSRYTMDLFRLSSVVTE 144

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +      +   +      LS     Y ++QA D   L    D   Q GG DQ       +
Sbjct: 145 HDAKKAGAEVVKQVDNAPLS--GLIYPLMQALDEEHL----DVDAQFGGVDQRKIFALAL 198

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   R+   +   L +P++   +G KM  +
Sbjct: 199 DTLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|301626308|ref|XP_002942334.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Xenopus
           (Silurana) tropicalis]
          Length = 68

 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 368 AR--RHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
           AR    + S  + IN+  ++N    +   Q     G   L  GKKN  +  
Sbjct: 14  ARGYEMISSGGLSINHRKVTNPDEVLVPGQHILQNGLSLLRVGKKNFYVVK 64


>gi|332026599|gb|EGI66708.1| Tyrosyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 522

 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 67/235 (28%), Gaps = 21/235 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + +  +L  +  +  +  Y G   T    H G+   +  +    +   +  
Sbjct: 12  LITRNLAEWLGDE-KLKNILKERDLKLYWGTATTGKP-HIGYFVPMSKIADFLRAQTEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++   +  + I  S +K           +    
Sbjct: 70  ILFADLHAYL--------DNMKAPWELLELRTQYYEAIIKSILKSIDVPLDKLKFIKGTD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           +  S +Y   +  + S  + +       E V+               Y  LQA D   L 
Sbjct: 122 FQLSKEYTLDVYRLSSLVTEHDAKKAGAEVVKQVSNP----LLSGLLYPGLQALDEYHLK 177

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                  Q GG DQ             L   K   L +P++   +G KM  +   
Sbjct: 178 ----VDAQFGGVDQRKIFTFSEKYLPMLGYEKHIHLMNPMIPGLAGAKMSSSEED 228


>gi|321251065|ref|XP_003191946.1| cytoplasmic tyrosyl-tRNA synthetase; Tys1p [Cryptococcus gattii
           WM276]
 gi|317458414|gb|ADV20159.1| Cytoplasmic tyrosyl-tRNA synthetase, putative; Tys1p [Cryptococcus
           gattii WM276]
          Length = 789

 Score = 60.9 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 69/224 (30%), Gaps = 15/224 (6%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++++   +  + S+G V  AY G   T    H  +   L+ +      G     L+  
Sbjct: 26  LQEVTSGDVIRKVLSEGKVVKAYWGTAPTGRP-HIAYCVPLLKIADFLTAGVHVKVLLAD 84

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + + D S         R +   + +  +  +    I      T +       +   + 
Sbjct: 85  LHAFL-DASKSTLETVQYRVKYYSKLLITVFTVLGVPIDKLEFITGSSYQLKPDYTLDMY 143

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
               L            +  ES        +S       Y  LQA D   L    D   Q
Sbjct: 144 RFHALTSTREAEHAGADVVKES--------ESPLMSSLLYPGLQALDEQYL----DVDFQ 191

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            GG DQ    +       +L   K   L + ++   SG KM  +
Sbjct: 192 FGGVDQRKIFMYAATFLPKLGYSKRAHLMNGMVPGLSGGKMSAS 235


>gi|71992775|ref|NP_740947.2| hypothetical protein Y105E8A.19 [Caenorhabditis elegans]
 gi|29603456|emb|CAD21668.2| C. elegans protein Y105E8A.19, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|30962539|dbj|BAC76736.1| tyrosyl-tRNA synthetase (cytoplasmic) [Caenorhabditis elegans]
          Length = 722

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 85/294 (28%), Gaps = 27/294 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             L  R     +   +    L + G V   Y G   T    H G+L  +  +    + G 
Sbjct: 20  RELILRNLQESLGVDKLTKQLETPGKVPHVYWGTATTGKP-HVGYLVPMRKIADFLQAGL 78

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K   L     + + D + +     +       EN+ K                       
Sbjct: 79  KVTILFADLHAYL-D-NMKSSWELLKCRVIYYENVIKALLQ-----SLDVPIEQLYFKKG 131

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             +  S +Y D +  + +  S    L    E V+       S         + + Y  V 
Sbjct: 132 TEYQLSREYTDDVLRLSAQVSQRDALKAGAEVVKQVESPLLSGLLYPLLQALDEQYLKV- 190

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
                    Q GG DQ    I   +   +LK  K + L +P++   +GTKM  +      
Sbjct: 191 -------DGQFGGVDQRKIFILAEEQLPKLKLGKRWHLMNPMVPGLTGTKMSSSEED--S 241

Query: 247 LNKEMTSPYNFWQYWR------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
               +  P              +  D  V+SF   +    +S      + Q   
Sbjct: 242 KIDVLDEPEKVRSKIMGAACSRDQPDNGVLSFYNFVLFPIVSPNAIEIENQQFF 295


>gi|224081816|ref|XP_002197331.1| PREDICTED: tyrosyl-tRNA synthetase [Taeniopygia guttata]
          Length = 527

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 69/235 (29%), Gaps = 19/235 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEEKLMAILQERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L     + +               + ++      + +  + ++  G        +   
Sbjct: 70  TILFADLHAYL--------DNMKAPWELLELRTRYYEHVIKAMLESIGVPLEKLKFVRGT 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +  S +Y   +  + S  + +        V  +++           Y  LQA D   L 
Sbjct: 122 DYQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                  Q GG DQ             L   K   L +P++   +G+KM  +   
Sbjct: 179 ----VDAQFGGVDQRKIFTFAEKYLPSLGYAKRVHLMNPMVPGLTGSKMSSSEED 229


>gi|296207378|ref|XP_002750628.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 528

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 69/229 (30%), Gaps = 19/229 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L     + +               + ++  +   + +  + ++  G        +   
Sbjct: 70  TILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGT 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +  S +Y   +  + S  + +        V  +++           Y  LQA D   L 
Sbjct: 122 DYQLSKEYTLDVYRLSSMVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                  Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ----VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|209735494|gb|ACI68616.1| Tyrosyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 237

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 66/236 (27%), Gaps = 23/236 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    ++  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKIKQVLAERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M    E+ E   +        +    G        +   
Sbjct: 71  ILFADLHAFL---------DNMKAPWELLELRVQYYEQVIKAMLESIGVPLDKLKFIKGT 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   +  + S  + +       E V+               Y  LQA D   L
Sbjct: 122 DFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVDHP----LLSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                   Q GG DQ             L   K   L +P++   +G KM  +   
Sbjct: 178 K----VDAQFGGVDQRKIFTLAEKYLPSLGYAKRSHLMNPMVPGLTGAKMSSSEEE 229


>gi|171186374|ref|YP_001795293.1| tyrosyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935586|gb|ACB40847.1| tyrosyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 372

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 96/294 (32%), Gaps = 24/294 (8%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGG 76
            ++    EL  L   G  +  YIG++++   +H G     M  +  LQ+ G +    +  
Sbjct: 16  EEVITVEELRELFQAGYRLNHYIGFEISG-FIHIGTGIVSMSKVVDLQRAGVRTQIFLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET-WLCSI 135
             S + +    D    ++R   +   +E  K I  S    G        +     +  + 
Sbjct: 75  IHSWLNNKLGGDLE--VIRRVAVTYYVETFKRIIESL---GGDPDATRFILGSDLYHHND 129

Query: 136 KYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +Y  LL +I    +++++    ++   ++     L++    Y  LQ  D   L    +  
Sbjct: 130 EYWLLLMDITRHLTLSQVRHSLTILGRKMGESIPLAY--LVYPPLQVADVFAL----EAH 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +  GG DQ    +   D+ ++++           L           L   +     +TS 
Sbjct: 184 IPHGGIDQRRAHVLARDVADKVRFYP--------LKVDGKRVKPVALHHKLLPALNITSK 235

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               +    +  +  V  +         EI +          + +     E+  
Sbjct: 236 PTSREELSELKMSKSVPQSAIFVHDSPEEIRQKIARAYCPPRDTEYNPVLELLR 289


>gi|193641272|ref|XP_001945437.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic [Acyrthosiphon
           pisum]
          Length = 527

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 104/347 (29%), Gaps = 32/347 (9%)

Query: 5   KSDFLSI--LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            S  +    L  R    ++    +LD++  +  +  Y G   T    H  +   +  +  
Sbjct: 1   MSSAIEKKNLILRNL-QEVLGEDKLDVILKERDLKIYWGTATTGRP-HIAYFVPISKIAD 58

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-KYGTGKT 121
             K G +   L     + +               + ++  ++  +    + +   G    
Sbjct: 59  YLKAGCEVTILFADLHAYL--------DNMKAPWELLELRVQYYEHSIKAMLSSIGVSLE 110

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMIL 179
               +    +  S +Y   +  + S  SV+       E V+               Y  L
Sbjct: 111 KLKFVRGTEYQLSKEYTMDMYRLSSSISVHDAKKAGAEVVKQVDNP----LLSGLLYPGL 166

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA D   L        Q GG DQ            +L   K   L +P++   +G KM  
Sbjct: 167 QALDEEYLK----VDAQFGGVDQRKIFTMSEKYLPQLGYEKRIHLMNPMVPGLAGGKMSS 222

Query: 240 TLSGAIWLNKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           +          + SP    +  +       NI +  +++FAK +        ++    + 
Sbjct: 223 SEVD--SKIDLLDSPATVKKKLKKAFCEPGNIAENGLLAFAKHVIFGLFEPNEKFKISRN 280

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           +         A E   +    ++   A   A   F ++     +  I
Sbjct: 281 EANGGDLNFSAYEDLEICFSEQKLHPADLKASIEFYINRLLDPIRQI 327


>gi|41151996|ref|NP_958473.1| tyrosyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|37681971|gb|AAQ97863.1| tyrosyl-tRNA synthetase [Danio rerio]
 gi|94733604|emb|CAK04282.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 529

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 59/412 (14%), Positives = 110/412 (26%), Gaps = 62/412 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNN 128
             L     + +           M    E+ E   K        +    G        +  
Sbjct: 70  TILFADLHAYL---------DNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IW 246
                   Q GG DQ             L   K   L +P++   +G+KM  +   + I 
Sbjct: 178 K----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKMSSSEEESKID 233

Query: 247 LNKEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN------ 296
           L  +        +        +++  V+SF K +     SE       +           
Sbjct: 234 LLDKNQDVKKKLKKAFCEPGNVENNGVLSFVKHVLFPLHSEFVIKRDPKFGGDKVYTDFE 293

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E +K  A E       +   E A    ++       S  +  ++ S              
Sbjct: 294 EVEKDFAAEQIHPGDLKASVELALNKLLDPIRKKFESPELKKLTSSAYP----------- 342

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
                  S             K N    +++   I  +       + +  GK
Sbjct: 343 -----EPSK-------NKGGAKGNPKQTTDDDEVIPSR-------LDIRVGK 375


>gi|291408865|ref|XP_002720753.1| PREDICTED: tyrosyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 528

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFVKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|322696039|gb|EFY87837.1| tyrosyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 390

 Score = 60.2 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 15/234 (6%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R  + ++ NP  ++ + ++G     Y G   T    H G+    + +      G     L
Sbjct: 14  RENLAEVLNPEIIEKILAEGRHPKIYWGTATTGRP-HCGYFVPAIKIAQFLAAGCDVTIL 72

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +      +       ++ +       Q        I +     G        +   ++  
Sbjct: 73  LADIHGFL-------DNLKAPIELVEQRVHFYRYVITAMLEAVGVSTEKLRFVQGSSYQK 125

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           S +Y+  + ++ S  S +      +   +      LS     Y ILQ  D   L    D 
Sbjct: 126 SPEYVMDIYKLSSLVSEHDAKRAGAEVVKQTANAPLS--GLLYPILQVLDEQYL----DV 179

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             Q GG DQ        +   ++   +   L +P++    G KM  +  G   +
Sbjct: 180 DAQFGGLDQRKLFTAAKEWLPKIGYKQRAHLLNPMVPGLQGGKMSSSDQGDYPI 233


>gi|149694717|ref|XP_001499856.1| PREDICTED: similar to Tyrosyl-tRNA synthetase, cytoplasmic
           (Tyrosyl--tRNA ligase) (TyrRS) [Equus caballus]
          Length = 535

 Score = 59.8 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 69/228 (30%), Gaps = 18/228 (7%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + ++   ++L  +  +  +  Y G   T    H  +   +  +    K G +   L    
Sbjct: 25  LQEVLGEQKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADL 83

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIK 136
            + +               + ++      + +  + ++  G        +    +  S +
Sbjct: 84  HAYL--------DNMKAPWELLELRASYYENVIKAMLESIGVPLEKLKFVKGTDYQLSKE 135

Query: 137 YIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
           Y   +  + S  + +        V  +++           Y  LQA D   L        
Sbjct: 136 YTLDVYRLSSLVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK----ADA 188

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           Q GG DQ             L   K   L +P++   +G+KM  +   
Sbjct: 189 QFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEED 236


>gi|308471010|ref|XP_003097737.1| hypothetical protein CRE_14235 [Caenorhabditis remanei]
 gi|308239855|gb|EFO83807.1| hypothetical protein CRE_14235 [Caenorhabditis remanei]
          Length = 718

 Score = 59.8 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 89/295 (30%), Gaps = 23/295 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             L  R     +   +    L + G V   Y G   T    H G+L  +  +    + G 
Sbjct: 20  RDLILRNLQESLGVDKLTKQLETDGKVAHVYWGTATTGKP-HVGYLVPMRKIADFLQAGL 78

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K   L     + + D + +     +       E + K                       
Sbjct: 79  KVTILFADLHAYL-D-NMKSSWELLKSRVVYYECVIKALLQ-----SLDVPIEQLYFKKG 131

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +  S +Y D +  +       ++   +++++  +  + +S    + ++      +   
Sbjct: 132 TEYQLSREYTDDVLRLS-----AQVSQRDALKAGAEVVKQVSSPLLSGLLYPLLQAL-DE 185

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +      Q GG DQ    I   +   +LK  K + L +P++   +GTKM  +        
Sbjct: 186 QYLKVDGQFGGVDQRKIFILAEEQLPKLKLGKRWHLMNPMVPGLTGTKMSSSEED--SKI 243

Query: 249 KEMTSPYNFWQYWR------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
             +  P              +  D  V+SF   +    +S        Q     E
Sbjct: 244 DVLDEPDRVRTKIMGAACSRDQPDNGVLSFYNFVLFPIVSPNAIEISNQQFFDFE 298


>gi|114555390|ref|XP_001164386.1| PREDICTED: tyrosyl-tRNA synthetase isoform 7 [Pan troglodytes]
          Length = 598

 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|114555400|ref|XP_001164458.1| PREDICTED: tyrosyl-tRNA synthetase isoform 9 [Pan troglodytes]
          Length = 525

 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|209413701|ref|NP_001126056.1| tyrosyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|75041625|sp|Q5R8T5|SYYC_PONAB RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|55730203|emb|CAH91825.1| hypothetical protein [Pongo abelii]
          Length = 528

 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLTFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|58258349|ref|XP_566587.1| phosphoribosylamidoimidazole-succinocarboxamide synthase
           [Cryptococcus neoformans var. neoformans JEC21]
 gi|57222724|gb|AAW40768.1| phosphoribosylamidoimidazole-succinocarboxamide synthase, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 824

 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 68/229 (29%), Gaps = 16/229 (6%)

Query: 13  SERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
             R    ++++   +  + S+G V  AY G   T    H  +   L+ +      G    
Sbjct: 22  ITRNL-QEVTSGEVIRKVLSEGKVVKAYWGTAPTGRP-HIAYCVPLLKIADFLTAGVNVK 79

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + + D S         R +   + +  +  +           T +       +
Sbjct: 80  VLLADLHAFL-DASKSTLETVQYRVKYYSKLLITVFTVLGVPTDKLEFITGSSYQLKPDY 138

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +     L            +  ES        +S       Y  LQA D   L    
Sbjct: 139 TLDVYRFHALTSTREAEHAGADVVKES--------ESPLMSSLLYPGLQALDEQYL---- 186

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   Q GG DQ    +       +L   K   L + ++   SG KM  +
Sbjct: 187 DVDFQFGGVDQRKIFMYAATFLPKLGYSKRAHLMNAMVPGLSGGKMSAS 235


>gi|114555392|ref|XP_524651.2| PREDICTED: tyrosyl-tRNA synthetase isoform 11 [Pan troglodytes]
 gi|114555394|ref|XP_001164171.1| PREDICTED: tyrosyl-tRNA synthetase isoform 4 [Pan troglodytes]
 gi|114555396|ref|XP_001164426.1| PREDICTED: tyrosyl-tRNA synthetase isoform 8 [Pan troglodytes]
 gi|114555398|ref|XP_001164500.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic isoform 10 [Pan
           troglodytes]
          Length = 528

 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|332254613|ref|XP_003276424.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic-like [Nomascus
           leucogenys]
          Length = 528

 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|145231737|ref|XP_001399342.1| tyrosyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
 gi|134056246|emb|CAK37503.1| unnamed protein product [Aspergillus niger]
          Length = 382

 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 75/228 (32%), Gaps = 17/228 (7%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ N   ++ + ++G     Y G   T    H G+L   + +      G +   L+  
Sbjct: 17  LQEVLNKDIIETILAEGRSPKIYWGTSPTGKP-HCGYLVPAVKIAQFLAAGAEMTILIAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSI 135
             +        +        + ++   +  +   ++ ++  G        +   ++  + 
Sbjct: 76  LHA--------NLDSLKSTFEIVEHRAKYYEYTITALLQAVGVSTEKLRFVRGSSYQKNA 127

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            Y+  +  + S  S +      +   +      LS     Y +LQ  D   L    D   
Sbjct: 128 DYVMDVYRLSSVVSEHDAKRAGAEIVKQSNNGPLS--GLLYPLLQVLDEQYL----DVDA 181

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           Q GG DQ        +   +L   K   L + ++   SG KM  +   
Sbjct: 182 QFGGLDQRKLFAASTEWHPKLGYKKRAHLCNAMVPGLSGGKMSSSEED 229


>gi|91083743|ref|XP_971153.1| PREDICTED: similar to tyrosyl-tRNA synthetase [Tribolium castaneum]
 gi|270006799|gb|EFA03247.1| hypothetical protein TcasGA2_TC013181 [Tribolium castaneum]
          Length = 521

 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 73/256 (28%), Gaps = 23/256 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    ++  + SQ  +  Y G   T    H  +   +  +    + G + 
Sbjct: 14  ELITRNL-QEVLGESKIKTILSQRDLKIYWGTATTGKP-HIAYFVPMSKIADFLRAGVEV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L     + +               + +   ++  +    + +K  G            
Sbjct: 72  TILFADLHAYL--------DNMKAPWELLALRVQYYEHTIKAMLKSIGVPLEKLRFEKGT 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            +  S +Y   +  + S  + +       E V+               Y  LQA D   L
Sbjct: 124 NYQLSKEYTLDVYRLSSIITEHDAKKAGAEVVKQVDHP----LVSGLLYPGLQALDEEYL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K   L +P++   +G KM  +       
Sbjct: 180 K----VDAQFGGVDQRKIFTFAEKYLPQLGYQKRAHLMNPMVPGLTGVKMSSSEED--SK 233

Query: 248 NKEMTSPYNFWQYWRN 263
              + SP    Q  + 
Sbjct: 234 IDLLDSPAAVKQKLKK 249


>gi|4507947|ref|NP_003671.1| tyrosyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|13638438|sp|P54577|SYYC_HUMAN RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|2665519|gb|AAB88409.1| tyrosyl-tRNA synthetase [Homo sapiens]
 gi|12804961|gb|AAH01933.1| Tyrosyl-tRNA synthetase [Homo sapiens]
 gi|13278750|gb|AAH04151.1| Tyrosyl-tRNA synthetase [Homo sapiens]
 gi|16741793|gb|AAH16689.1| Tyrosyl-tRNA synthetase [Homo sapiens]
 gi|119627911|gb|EAX07506.1| tyrosyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119627912|gb|EAX07507.1| tyrosyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|123981526|gb|ABM82592.1| tyrosyl-tRNA synthetase [synthetic construct]
 gi|123996355|gb|ABM85779.1| tyrosyl-tRNA synthetase [synthetic construct]
 gi|193785013|dbj|BAG54166.1| unnamed protein product [Homo sapiens]
          Length = 528

 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|121710874|ref|XP_001273053.1| tryptophanyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119401203|gb|EAW11627.1| tryptophanyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 434

 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 78/256 (30%), Gaps = 32/256 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG +    +    LD          Y G   ++ S+H GH        WLQ     P
Sbjct: 81  FMRRGIVFSHRDLNLILDRYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKWLQDVFDCP 140

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +      ++ D    DE     +  E+ +     K      I  G       + ++  
Sbjct: 141 LVI------MLTD----DEKYMHSQKIEVDDAKRYTKANAMDIIAVGFDMKKTFIFSDFD 190

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-- 188
           ++    Y ++         + + ++  SVR       S +  EF++   Q+      +  
Sbjct: 191 FVGGAFYENIC-------RMAKRITINSVRGTFGFNDSNNVGEFHFCATQSATAFATSFP 243

Query: 189 ------KNYDCRLQM---GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTK 236
                 +     +        DQ        +  E++K  K   + A+  P L       
Sbjct: 244 HIFGTDRKKVSSIPCLIPCAIDQDPYFRQCREHAEKMKYKKPSLIHAIFLPALQGPGSKM 303

Query: 237 MGKTLSGAIWLNKEMT 252
                + AI++N    
Sbjct: 304 SASVDTSAIYMNDAPN 319


>gi|114555410|ref|XP_001164315.1| PREDICTED: tyrosyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 374

 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|321468646|gb|EFX79630.1| hypothetical protein DAPPUDRAFT_304445 [Daphnia pulex]
          Length = 529

 Score = 59.8 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 44/356 (12%), Positives = 100/356 (28%), Gaps = 30/356 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    ++    ++  + ++  +  Y G   T    H  +   +  +    K G +
Sbjct: 16  KHLITRNL-QEVLGEDKITEILAKRDLKLYWGTATTGKP-HVAYFLPMSKIGDFLKAGCE 73

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L     + +       ++ +                I +  I           +   
Sbjct: 74  VTILFADLHAYL-------DNMKAPWELLALRTQYYEHAIKAMLISLKVPIDKLKFVKGS 126

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFES-VRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +  + +Y   +  + S  +        + V  ++            Y  LQA D   L 
Sbjct: 127 EYQLTKQYTLDMYRLSSLVTERDAKKAGAEVVKQVGNPL---LSGLMYPGLQALDEEYLK 183

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWL 247
                  Q GG DQ            +L   K   L +P++   +G KM  +   + I L
Sbjct: 184 ----VDAQFGGVDQRKIFTYADKYLPQLGYAKRAHLMNPMIPGLTGAKMSSSEEDSKIDL 239

Query: 248 NKEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
                S     +        +++  V++FAK +     +      K   +   + +  ++
Sbjct: 240 LDSAASVKKKMKKAFCEPGNVENNGVLAFAKYVLFPLNAGEGFHIKRGAENGGDVEY-MS 298

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            E       +               ++   +          ++     L+ L+  A
Sbjct: 299 YEQMESDFSQSLLHPGDLKTAVELQLNDLLE-------PIRKIFEAPELVKLVKDA 347


>gi|159041466|ref|YP_001540718.1| tyrosyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920301|gb|ABW01728.1| tyrosyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 374

 Score = 59.4 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 58/195 (29%), Gaps = 13/195 (6%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGG 77
             ++         +   +  YIG++++   +H G     M  L  LQK G K   L+   
Sbjct: 18  ELLTVEELRSYFETGETLKHYIGFEISG-YIHIGTGVVSMYKLVDLQKAGVKVSILLADL 76

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
            S +      D           +  +   K      I    G  D++     + L   K 
Sbjct: 77  HSWLNHKLGGDLE------VIRKVAVTYFKETLRKSISVLGGDPDSVDFILASNLTEEKR 130

Query: 138 IDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
              ++ +     V+      S+         S       Y ++Q  D   L       + 
Sbjct: 131 EYWVQVLDLARQVSLSDVRHSLTIMGRTFTNSAKMSWLIYPLMQVIDVYAL----GTHIA 186

Query: 197 MGGSDQWGNIICGID 211
            GG DQ    +   D
Sbjct: 187 HGGVDQRKVYVLARD 201


>gi|301772980|ref|XP_002921903.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 565

 Score = 59.4 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 50  LITRNL-QEVLGEEKLKEVLKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 107

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 108 ILFADLHAYL-D-NMKAPWELLELRTNYYENVIK-----AMLESIGVPLEKLKFVKGTDY 160

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 161 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 215

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 216 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 260


>gi|27065983|pdb|1N3L|A Chain A, Crystal Structure Of A Human Aminoacyl-Trna Synthetase
           Cytokine
 gi|40889349|pdb|1Q11|A Chain A, Crystal Structure Of An Active Fragment Of Human
           Tyrosyl-Trna Synthetase With Tyrosinol
          Length = 372

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|62898948|dbj|BAD97328.1| tyrosyl-tRNA synthetase variant [Homo sapiens]
          Length = 528

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 68/228 (29%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  +          V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQRDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|33322947|gb|AAQ07210.1|AF496518_1 tyrosyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. lactis]
          Length = 69

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  GA+WL+
Sbjct: 1   HGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGGAVWLD 60

Query: 249 KEMTSPYNF 257
            E TSPY F
Sbjct: 61  PEKTSPYEF 69


>gi|322703849|gb|EFY95451.1| tyrosyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 384

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 75/239 (31%), Gaps = 17/239 (7%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            D   I+  R  + ++ NP  ++ +  +G     Y G   T    H G+    + +    
Sbjct: 7   KDKFDII--RENLAEVLNPEIIEKILDEGRHPKIYWGTATTGRP-HCGYFVPAIKIAQFL 63

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G     L+      +       ++ +       Q        I +     G       
Sbjct: 64  AAGCDVTILLADIHGFL-------DNLKAPIELVEQRVHFYRYVITAMLEAVGVSTEKLR 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +   ++  S +YI  + ++ S  S +      +   +      +S     Y +LQ  D 
Sbjct: 117 FVQGSSYQKSPEYIMDIYKLSSLISEHDAKRAGAEVVKQTANAPMS--GLLYPVLQVLDE 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
             L    D   Q GG DQ        +   ++   +   L +P++    G KM  +   
Sbjct: 175 QYL----DVDAQFGGLDQRKLFTAAKEWLPKIGYKQRAHLLNPMVPGLQGGKMSSSDQD 229


>gi|119872247|ref|YP_930254.1| tyrosyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|158512996|sp|A1RSH9|SYY_PYRIL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119673655|gb|ABL87911.1| tyrosyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 372

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 93/295 (31%), Gaps = 26/295 (8%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGG 76
            ++    EL  L   G  +  YIG++++   +H G     M  +  LQK G K    +  
Sbjct: 16  EEVITVEELRELFQSGYKLNHYIGFEISG-FIHIGTGVVSMSKVVDLQKAGVKTQVFLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML-NNET-WLCS 134
             S + +    D           +  +      F   I+   G  DA         +  +
Sbjct: 75  IHSWLNNKLGGD------LDIIRKVAVTYYVETFKKIIEVLGGDPDATRFILGSELYHHN 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESV-RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +Y  LL +I    +++++    ++   ++     L++    Y  LQ  D   L    + 
Sbjct: 129 DEYWLLLMDITRHLTLSQVRHSLTILGRKMGESIPLAY--LVYPPLQVADVFAL----EA 182

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            +  GG DQ    I    + ++++           L           L   +     +TS
Sbjct: 183 HIPHGGIDQRRAHILARQVADKIRFYP--------LKVDGKRIKPVALHHKLLPALNITS 234

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             +  +    +  +  +  +         EI +          + +     E+  
Sbjct: 235 KPSSREELSEMKMSKSIPQSAIFVHDSPDEIRQKIAKAYCPPRDTEYNPVLELLR 289


>gi|1184699|gb|AAB39406.1| tyrosyl-tRNA synthetase [Homo sapiens]
          Length = 388

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|50954255|ref|YP_061543.1| tryptophanyl-tRNA synthetase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|71657986|sp|Q6AGQ7|SYW_LEIXX RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|50950737|gb|AAT88438.1| tryptophanyl-tRNA synthetase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 337

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 81/257 (31%), Gaps = 39/257 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSI--IGDPSF-RDES 90
               Y G   +A SLH G+    L+    LQ   H     +    +I    DP   R+++
Sbjct: 4   SPRLYSGMQPSADSLHLGNYVGALLQWKELQAA-HDAFFSVVDLHAITVAQDPHDLREKT 62

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           RR                     +     ++         W        +L  I  +   
Sbjct: 63  RRTAAQYIAAG--------IDPSVSTLYVQSHVPAHAQLAW--------VLSTITGYGEA 106

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RM  F+  +S  +  ++ S   F Y +L A D +     +D  +   G DQ  ++    
Sbjct: 107 ARMTQFKD-KSAKQGAEATSVGLFTYPVLMAADIL----LFDADVVPVGDDQRQHVELTR 161

Query: 211 DLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
           DL ER      + F +   ++               KM K+      +   +  P    +
Sbjct: 162 DLAERFNSRFGETFVVPQAMILKDGARIYDLQSPESKMSKSADSGAGIVWLLDEPDIARK 221

Query: 260 YWRN--IDDADVVSFAK 274
                  D   VVS+ +
Sbjct: 222 KIMRAVTDTDGVVSYDR 238


>gi|242024038|ref|XP_002432437.1| tyrosyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus
           corporis]
 gi|212517870|gb|EEB19699.1| tyrosyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus
           corporis]
          Length = 531

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 69/255 (27%), Gaps = 23/255 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    ++  +     +  Y G   T    H  +   +  +    K G +  
Sbjct: 19  LITRNL-QEVLGEEKMLEILKTRELKIYWGTATTGKP-HIAYFVPMSKIADFLKAGCEVT 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNE 129
            L     + +           M    E+            + +             +   
Sbjct: 77  ILFADLHAYL---------DNMKAPWELLSLRTTYYQQIITEMLKSINVPTEKLKFVRGS 127

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +  S +Y   + ++ +  + +        V  +++           Y  LQA D   L 
Sbjct: 128 DYQLSKEYTLDVYKLSTLITEHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK 184

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                  Q GG DQ            +L   K   L + ++   +G KM  +        
Sbjct: 185 ----IDAQFGGVDQRKIFTLAEKYLPQLGYTKRVHLMNCMVPGLTGAKMSSSEED--SKI 238

Query: 249 KEMTSPYNFWQYWRN 263
             + SP    +  + 
Sbjct: 239 DLLDSPEAVKKKLKK 253


>gi|217076652|ref|YP_002334368.1| tryptophanyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036505|gb|ACJ75027.1| tryptophanyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 331

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 76/222 (34%), Gaps = 26/222 (11%)

Query: 41  GYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   +     LQ+ GH+    +    ++                 + 
Sbjct: 6   GMRPTGK-LHIGHLFGALSSWVELQEKGHECFYFVADWHAL------------TTHYNDT 52

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +E +     +  S++  G     + +          +   L     S   + R+ +++ +
Sbjct: 53  KEIVNNSIELVKSYLAVGIDPNKSTIFIQSEIKEHAELTLLFSMFVSVSRLERVPTYKEI 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           + +L  +   +     Y +LQA D + + +     +   G DQ  +I    ++  R    
Sbjct: 113 KQQLSDKDLSNAGFLIYPVLQAADIL-IYRATGVPV---GEDQVYHIELTREIARRFNYL 168

Query: 218 TPKLFALTSPL------LTTASGTKMGKTLSGAIWLNKEMTS 253
             ++F    P+      L    G KM K+    I L  +  +
Sbjct: 169 YKEVFPEPEPILSKVPKLLGTDGRKMSKSYGNTIPLVADEET 210


>gi|156358447|ref|XP_001624530.1| predicted protein [Nematostella vectensis]
 gi|156211317|gb|EDO32430.1| predicted protein [Nematostella vectensis]
          Length = 540

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 19/235 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L +L     +  Y G   T    H  +   +  +      G + 
Sbjct: 17  QLITRNL-QEVIGDDRLKVLLKTQNLKLYWGTATTGRP-HVAYFVPMTKIADFLHAGCEV 74

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L+    + +               + ++  ++  + +  + ++           +   
Sbjct: 75  TILLADLHAYL--------DNLKAPWELLEHRVKYYEELIKAMLESINVPLDKLKFVKGT 126

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +  +  YI  + ++ +  + +        V  +++           Y  LQA D   L 
Sbjct: 127 EYQLNKDYILDVFKMTTIATEHDCKKAGAEVVKQVQHPL---LSGLLYPGLQALDEEYLK 183

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                  Q GG DQ             L   K   L +P++   +G KM  +   
Sbjct: 184 ----VDAQFGGVDQRKIFTFAEKYLPNLGYQKRIHLMNPMVPGLTGGKMSSSEED 234


>gi|94733605|emb|CAK04283.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 286

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 65/230 (28%), Gaps = 21/230 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNN 128
             L     + +           M    E+ E   K        +    G        +  
Sbjct: 70  TILFADLHAYL---------DNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKM 223


>gi|74137799|dbj|BAE24073.1| unnamed protein product [Mus musculus]
          Length = 528

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKKILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFIKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|67970555|dbj|BAE01620.1| unnamed protein product [Macaca fascicularis]
          Length = 489

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEDKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|327288144|ref|XP_003228788.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 528

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 71/227 (31%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEDKLKAILNERELKIYWGTATTGKP-HIAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +    +  EN+ K     +     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTQYYENVIK-----AMLESIGVPLEKLTFIRGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGVDQRKIFTFAEKYLPSLGYAKRIHLMNPMVPGLTGSKM 223


>gi|123249051|emb|CAM19725.1| tyrosyl-tRNA synthetase [Mus musculus]
 gi|148698262|gb|EDL30209.1| tyrosyl-tRNA synthetase [Mus musculus]
          Length = 564

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 49  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 106

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 107 ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFIKGTDY 159

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 160 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 214

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 215 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 259


>gi|74146625|dbj|BAE41320.1| unnamed protein product [Mus musculus]
          Length = 527

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 70  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFIKGTDY 122

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 123 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 177

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 222


>gi|26324732|dbj|BAC26120.1| unnamed protein product [Mus musculus]
          Length = 528

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFIKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|27806349|ref|NP_776645.1| tyrosyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|13638439|sp|Q29465|SYYC_BOVIN RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|3941720|gb|AAC82467.1| tyrosyl-tRNA synthetase [Bos taurus]
          Length = 528

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 67/228 (29%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +                 ++      + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWDVLELRTSYYENVIKAMLESIGVPLEKLRFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKYLPALGYSKRIHLMNPMVPGLTGSKM 223


>gi|165377181|ref|NP_598912.3| tyrosyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|50401640|sp|Q91WQ3|SYYC_MOUSE RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|15488844|gb|AAH13552.1| Tyrosyl-tRNA synthetase [Mus musculus]
 gi|18381055|gb|AAH22143.1| Tyrosyl-tRNA synthetase [Mus musculus]
 gi|20072367|gb|AAH26615.1| Tyrosyl-tRNA synthetase [Mus musculus]
 gi|26335952|dbj|BAC31674.1| unnamed protein product [Mus musculus]
 gi|74207145|dbj|BAE30766.1| unnamed protein product [Mus musculus]
 gi|74208389|dbj|BAE26384.1| unnamed protein product [Mus musculus]
          Length = 528

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFIKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|241026726|ref|XP_002406257.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215491907|gb|EEC01548.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 524

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 68/235 (28%), Gaps = 21/235 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++     ++ +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 21  LVSRNL-QEVLGDARMNEIMKERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 78

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +                 ++  ++  + +  + +   G        +   +
Sbjct: 79  ILFADLHAYL--------DNMKAPWDLLELRVQYYEHVIKAMLTSIGVPLEKLRFVKGSS 130

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           +    ++   +  + S  + +       E V+               Y  LQA D   L 
Sbjct: 131 YQLGREFSLDVYRLVSMVTEHDAKKAGAEVVKQVDHP----LLSSMLYPCLQALDEEYLH 186

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                  Q GG DQ            +L   K   L +P++   SG KM  +   
Sbjct: 187 ----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHLMNPMVPGLSGGKMSSSEED 237


>gi|157169525|ref|XP_001657882.1| tyrosyl-tRNA synthetase [Aedes aegypti]
 gi|108883662|gb|EAT47887.1| tyrosyl-tRNA synthetase [Aedes aegypti]
          Length = 524

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 72/245 (29%), Gaps = 19/245 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A   +    L  R    ++     +  +  +  +  Y G   T    H  +   +  +
Sbjct: 1   MTALTWEEKEQLITRNL-QEVLGQDNMRTILKERDLKVYWGTATTGKP-HIAYFVPMSKI 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-KYGTG 119
               K G +   L     + +                 +QE  +  + +  + +   G  
Sbjct: 59  ADFLKAGCEVTILFADLHAYL--------DNMKAPWSLLQERTKYYEAVIKAMLSSLGVP 110

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMI 178
                 +    +  S +Y   + ++ S  + +        V  +++           Y  
Sbjct: 111 LDKLKFVCGTDYQLSKEYTLDVYKLSSVVTQHDAKKAGAEVVKQVEHPL---LSGILYPG 167

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQA D   L        Q GG DQ            +L   K   L +P++   +G KM 
Sbjct: 168 LQALDEEYLK----VDAQFGGVDQRKIFTFAEKYMPQLGYAKRIHLMNPMIPGLAGGKMS 223

Query: 239 KTLSG 243
            +   
Sbjct: 224 SSEED 228


>gi|15922395|ref|NP_378064.1| tyrosyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15623184|dbj|BAB67173.1| 294aa long hypothetical tyrosyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 294

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 84/268 (31%), Gaps = 17/268 (6%)

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + I D    +          + +     +        YG   +   ++  E  
Sbjct: 3   ILVATWHAWINDKLGGN----------LDKIKLAGQYAIEVLNAYGVDMSKVRIVYAEDL 52

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y  L+  I    S+ RM    ++  R   E  L   +  Y  +Q  D +      
Sbjct: 53  VKDSNYWALVIRIAKNTSLARMKRALTIMGRKAEEAELDTSKLIYPAMQVADILYQ---- 108

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAIWLNKE 250
           D  + +GG+DQ    +   D+ ++L   K+ A+ +PLL     G +M          + +
Sbjct: 109 DLDIALGGTDQRKAHMLARDVSDKLGKKKVIAIHTPLLIGLQGGQRMEGVEEDDYLASVK 168

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK--IIATEITT 308
           M+        + +     V +  +         ID       K I  AK    +  E   
Sbjct: 169 MSKSKPETAIFVHDPPEVVEAKLRSAYCPKGVVIDNPVLQINKYIIFAKDNATLKVERDI 228

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHM 336
              G  E +          +  +H   +
Sbjct: 229 KYGGDIEFKSYEELEKIYSEGKLHPLDL 256


>gi|94733606|emb|CAK04284.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 251

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 65/230 (28%), Gaps = 21/230 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNN 128
             L     + +           M    E+ E   K        +    G        +  
Sbjct: 70  TILFADLHAYL---------DNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKG 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +  S +Y   +  + S  + +        V  +++           Y  LQA D   L
Sbjct: 121 TDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKM 223


>gi|57530465|ref|NP_001006314.1| tyrosyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|82081403|sp|Q5ZJ08|SYYC_CHICK RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|53133917|emb|CAG32285.1| hypothetical protein RCJMB04_21p3 [Gallus gallus]
          Length = 527

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 69/235 (29%), Gaps = 19/235 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    +L  +  +  V  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEDKLMAILKEREVKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L     + +               + ++      + +  + ++  G        +   
Sbjct: 70  TILFADLHAYL--------DNMKAPWELLELRTRYYEHVIKAMLESIGVPLEKLKFIRGT 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +  S +Y   +  + S  + +        V  +++           Y  LQA D   L 
Sbjct: 122 DYQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                  Q GG DQ             L   K   L +P++   +G+KM  +   
Sbjct: 179 ----VDAQFGGVDQRKIFTFAEKYLPSLGYAKRIHLMNPMVPGLTGSKMSSSEED 229


>gi|146417394|ref|XP_001484666.1| hypothetical protein PGUG_02395 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390139|gb|EDK38297.1| hypothetical protein PGUG_02395 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 404

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 69/226 (30%), Gaps = 19/226 (8%)

Query: 12  LSERGFIHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L  R     + N + ++ +    +  V  Y G   T    H G+   ++ L  L K G +
Sbjct: 13  LITRNLQEYL-NGQIIENVLQNEKRPVKVYWGTAPTGRP-HCGYFVPMVKLADLLKAGCE 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +       ++ +              K + +              +   
Sbjct: 71  VTVLLADLHAFL-------DNMKAPLETVQFRAQYYGKLVKAILKSINVPIDKLKFVVGS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++  S KY   L  + +  S N        V  ++            Y ++QA D     
Sbjct: 124 SYQLSEKYTMDLFRLSNIVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDE---- 176

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           +  D  +Q GG DQ    +   +    L   K   L + ++     
Sbjct: 177 EFLDVDVQFGGVDQRKIFVLAEENLPGLGYKKRAHLMNKMVPGLGQ 222


>gi|289616415|emb|CBI56942.1| unnamed protein product [Sordaria macrospora]
          Length = 407

 Score = 59.0 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 82/252 (32%), Gaps = 17/252 (6%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP  ++ +  +G     Y G   T    H G+L   + +  L   G   I L+  
Sbjct: 36  LAEVLNPEIIEKVIDEGRAPRIYWGTATTGRP-HCGYLVPAIKIAQLLAAGCHVIVLLAD 94

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             +++       ++ +              + I +     G        +   ++  S  
Sbjct: 95  IHAVL-------DNLKSTVELVGYRAKYYERTITALLKAVGVPTDKLEFVLGSSYQKSPD 147

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           YI  + ++ +  S +      +   +      LS     Y ILQ  D   L        Q
Sbjct: 148 YIMDVYKLATLVSEHDAKKAGAEVVKQSDNAPLS--GLLYPILQVLDEEYLK----VDAQ 201

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
            GG DQ        D   RL   +   + +P++    G+KM  +          + +P  
Sbjct: 202 FGGVDQRKLFAAAKDWLPRLGYKERAHIMNPMVPGLQGSKMSSS--DPDSKIDLLDAPEV 259

Query: 257 FWQYWRNIDDAD 268
             +  R  + A 
Sbjct: 260 VTKKIRKAEAAP 271


>gi|153845945|ref|ZP_01993814.1| tyrosyl-tRNA synthetase 1 [Vibrio parahaemolyticus AQ3810]
 gi|149745022|gb|EDM56320.1| tyrosyl-tRNA synthetase 1 [Vibrio parahaemolyticus AQ3810]
          Length = 164

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
            + GTK GKT  GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +   
Sbjct: 1   KSDGTKFGKTEGGAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQ 60

Query: 291 QG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
               +   +A++I+A E+T  VHG E    A       F  ++    +    + + E+  
Sbjct: 61  DQASQGKPQAQRILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSL--GELKQLELDG 118

Query: 349 GMGL 352
              +
Sbjct: 119 LPSI 122


>gi|289743725|gb|ADD20610.1| cytoplasmic tryptophanyl-tRNA synthetase [Glossina morsitans
           morsitans]
          Length = 430

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 78/233 (33%), Gaps = 27/233 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L++         Y G   ++ SLH GHL   ++  WLQ+T   P+ +             
Sbjct: 106 LNLKEQGKPFYLYTGRGPSSESLHLGHLIPFIMTKWLQETFDVPLVI-----------QL 154

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +  ++ E I+  +      +  G       + NN T++             +
Sbjct: 155 TDDEKTLWKDLKVDEAIKLARENAKDIVAMGFNVEKTFIFNNLTFMGQ-----CPSMYQN 209

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AYDFVELAKNYDCRLQMGG 199
              + + ++F  V+       S    +  +   Q        + F+   K   C +    
Sbjct: 210 IIRIQKCVTFNQVKGIFGFGDSDVIGKIGFPAAQAAPAISSTFPFLFGNKKVHCLVPC-A 268

Query: 200 SDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            DQ        D+  +L  PK   + +   P L  A         + AI+L  
Sbjct: 269 IDQDPYFRMTRDVSPKLGYPKCALIHSSFFPALQGAKSKMSASEQNSAIFLTD 321


>gi|156087959|ref|XP_001611386.1| tryptophanyl-tRNA synthetase family protein [Babesia bovis]
 gi|154798640|gb|EDO07818.1| tryptophanyl-tRNA synthetase family protein [Babesia bovis]
          Length = 587

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 76/253 (30%), Gaps = 26/253 (10%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG        + LD          Y G   +  +LH GHL   +   WLQ+    P+ +M
Sbjct: 256 RGL------DQLLDAYEQGVPFFIYTGRGPSTGALHLGHLVPFLFTKWLQEVFQVPVVIM 309

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENI--EKIKGIFSSFIKYGTGKTDALMLNNETWL 132
                         +  + +  ++++ +   +  +      I  G       +  N  ++
Sbjct: 310 ------------MSDDEKFLFREQLEYDAVRDMARENAKDIISCGFDPDLTFIYRNTDYI 357

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                  +  ++    + N++        S      +   +E      QAY  +   +N 
Sbjct: 358 QD--LYGIALKMQKKTTFNQVKGIFGFNMSSNIGCIAYPAIEGAAAFCQAYPKIFGQRND 415

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLN 248
              L   G DQ        DL  RL   K   + +   P L   +          AI++ 
Sbjct: 416 MLCLVPQGIDQDPFFRMTRDLAPRLGYLKPISIHSKFIPSLLGVTQKMSSSIEGSAIFVT 475

Query: 249 KEMTSPYNFWQYW 261
                  +    +
Sbjct: 476 DTPKMIRDKVHKY 488


>gi|50548779|ref|XP_501859.1| YALI0C15224p [Yarrowia lipolytica]
 gi|49647726|emb|CAG82172.1| YALI0C15224p [Yarrowia lipolytica]
          Length = 393

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 19/226 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++    LD    +  +  Y G   T    H G+   +  +      G + 
Sbjct: 10  DLISRNLQEVLNKQIILDT-LKERELKIYWGTAPTGKP-HCGYFVPMTKIADFLAAGCEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
             L+    + +               + +Q  ++  + +  + ++  G        +   
Sbjct: 68  KILLADLHAFL--------DNMKAPLELVQHRVQYYEYMIKAILRSIGVPLDKLTFVIGR 119

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           ++  S +Y   L ++ +  SVN        V  ++            Y ++QA D   L 
Sbjct: 120 SFELSAEYTMDLFKLSNRVSVNDAKRAGADVVKQVDNPL---LSGLIYPLMQALDEEYL- 175

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
                  Q GG DQ    +   +    +   K   + +P++   + 
Sbjct: 176 ---GVDAQFGGVDQRKIFVLAEENLTSIGYKKRAHMMNPMVPGLTQ 218


>gi|296490153|gb|DAA32266.1| tyrosyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 528

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLRFIKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRIHLMNPMVPGLTGSKM 223


>gi|113912165|gb|AAI22624.1| YARS protein [Bos taurus]
          Length = 528

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLRFIKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGVDQRKIFTFAEKYLPALGYSKRIHLMNPMVPGLTGSKM 223


>gi|312090013|ref|XP_003146456.1| tyrosyl-tRNA synthetase [Loa loa]
 gi|307758380|gb|EFO17614.1| tyrosyl-tRNA synthetase [Loa loa]
          Length = 737

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 71/236 (30%), Gaps = 22/236 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     +   +    L S+  +  Y G   T    H G+   +  +        +  
Sbjct: 26  LITRNLKEVLGLEKITKQLASKKKIHVYWGTATTGKP-HVGYFVPIRKIADFLSANLRVT 84

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQEN--IEKIKGIFSSFIKYGTGKTDALMLNNE 129
            L     + +           +  + E+ +N  +   K I +              +   
Sbjct: 85  ILFADLHAFL---------DNLKSTWELLDNRVLYYEKVIKALLTALHVPLDQLHFVRGT 135

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           ++  S +Y   L  + +  +    L    E V+       S         + + Y  V  
Sbjct: 136 SYQLSREYTSDLLRLCNIVTRRDALRAGAEVVKQVASPLLSGLLYPLLQALDEQYLKV-- 193

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                   Q GG DQ    I   +   +LK  K F L +P++    G+KM  +   
Sbjct: 194 ------DGQFGGIDQRKIFILAEEQLPKLKLGKRFHLMNPMVPGLQGSKMSSSEEN 243


>gi|126330244|ref|XP_001366601.1| PREDICTED: similar to tyrosyl-tRNA synthetase [Monodelphis
           domestica]
          Length = 528

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 19/228 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     S     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----SMLESIGVSLEKLKFVKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
             S +Y   +  + S  + +       E V+     E  L      Y  LQA D   L  
Sbjct: 124 QLSKEYTLDVYRLSSMVTQHDAKKAGAEVVKQ---VEYPL-LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                 Q GG DQ         +       K   L +P++   +G+KM
Sbjct: 179 ---VDAQFGGVDQRKIFTFAEKVSPXXXYSKRIHLMNPMVPGLTGSKM 223


>gi|169867176|ref|XP_001840169.1| tyrosyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116498721|gb|EAU81616.1| tyrosyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 456

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 72/254 (28%), Gaps = 20/254 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R    ++     +  + ++G     Y G   T    H G+   L  +    + G +
Sbjct: 34  ELITRRL-QEVLGGDLIKGILAEGRHPKCYWGTAPTGRP-HIGYFVPLTKISDFLRAGVE 91

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +       ++ +                + S F            +   
Sbjct: 92  VKILLADVHAFL-------DNLKAPLDLVAHRTKYYEFIVRSVFKSLNIPTEKLTFVTGS 144

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           T+  + +Y      + +  + +        V  +++           Y  LQA D   L 
Sbjct: 145 TFQLTKEYNLDNYRLCATVTEHDAKKAGAEVVKQVESPL---LSGLLYPGLQALDEEYL- 200

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
               C  Q GG DQ            RL   K   L + ++    G KM  + S      
Sbjct: 201 ---GCDFQFGGVDQRKIFTFAELYLPRLGYRKRAHLMNAMVPGLGGGKM--SASDPNSKI 255

Query: 249 KEMTSPYNFWQYWR 262
             +  P    +  R
Sbjct: 256 DLLDPPEVVKKKIR 269


>gi|322793691|gb|EFZ17115.1| hypothetical protein SINV_09161 [Solenopsis invicta]
          Length = 523

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 59/232 (25%), Gaps = 15/232 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + +  +L  +  +  +  Y G   T    H G+   +  +    +   +  
Sbjct: 11  LITRNLAEWLGDE-KLKNILKERDLRLYWGTATTGKP-HIGYFAPMSKIADFLRASTEVT 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D    +        +   +  E +       I     K   +   +   
Sbjct: 69  ILFADLHAYL-D----NMKAPWELLELRTQYYEAMIKAMLKSIDVPLDKLKFVKGTDYQL 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                               +    E V+               Y  LQA D   L    
Sbjct: 124 TKEYTLDVYRLSSLVTEHDAKKAGAEVVKQVANP----LLSGLLYPGLQALDEHHLK--- 176

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
               Q GG DQ             L   K   L +P++   +G KM  +   
Sbjct: 177 -VDAQFGGVDQRKIFTFSEKYLPMLGYEKHIHLMNPMIPGLAGAKMSSSEED 227


>gi|300123319|emb|CBK24592.2| unnamed protein product [Blastocystis hominis]
          Length = 455

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 65/239 (27%), Gaps = 17/239 (7%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ SLH GHL       WLQ   H P+ +
Sbjct: 125 RGLFFSHRDLNLILDAYEKGEKFYLYTGRGPSSGSLHLGHLIPFFFTKWLQDVFHCPLVI 184

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + E  +         I  G       + N+  ++ 
Sbjct: 185 -----------QLTDDEKFLWKKLTLDECRQMCIDNAKDIIACGFDPKLTFIFNDMRYIG 233

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +     +  I    +VN   +           Q             +     L  +   
Sbjct: 234 EMYPN--IVRIQKCVTVNTARAIFGFSDDSNIGQQAFPAIQAAPSFSSSFPRVLCSSKLR 291

Query: 194 RLQMGGSDQWGNIICGIDL---GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            L     DQ        D+    +  K   + +   P LT         T +  I++  
Sbjct: 292 CLIPCAIDQDPYFRMTRDVAVRLKEFKPALIHSKFIPSLTGLGTKMSASTQNTCIYVTD 350


>gi|121712682|ref|XP_001273952.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119402105|gb|EAW12526.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 385

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 73/252 (28%), Gaps = 16/252 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L        ++      I+        Y G   T    HAG+    + +      G   +
Sbjct: 12  LINENLAEVLNPEIIEKIIAEGRSPRIYWGTATTGRP-HAGYFVPAIKIAQFLAAGCDMV 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+      + D + +     +    +   N      I S     G        +   ++
Sbjct: 71  ILLADIHGFL-D-NLKAPIELVQHRVDFYRNA-----IISILRSVGVSTEKLTFVLGSSY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S  Y+  +  + S  S +      +   +      LS     Y +LQ  D   L    
Sbjct: 124 QKSPDYVMDVYRLCSLVSEHDAKKAGAEVVKQSDNCPLS--GLLYPVLQVLDEQYL---- 177

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +   Q GG DQ        +   RL   +   L +P++    G KM  + S        +
Sbjct: 178 NVDAQFGGVDQRKLFAAAKEWLPRLGYKQRAHLLNPMVPGLHGGKM--SASDPDSKIDLL 235

Query: 252 TSPYNFWQYWRN 263
             P    +  R 
Sbjct: 236 DPPEVVRKKIRK 247


>gi|119717779|ref|YP_924744.1| tryptophanyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119538440|gb|ABL83057.1| tryptophanyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 352

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 79/236 (33%), Gaps = 33/236 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   TA S H G+      L         ++P   +    +             +   Q+
Sbjct: 26  GIQPTADSFHFGNYLG--ALRQWVDLQEDYQPFFFIADLHA-------------ITVEQD 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +   E+     +  I  G     + +          +   +L+ +  F    RM  F+ 
Sbjct: 71  PKVLRERTLRAAAQLIAMGIDPDRSAIFVQSQVPEHAQLGWVLQCLTGFGEARRMTQFKD 130

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
            +S    E + S   F Y ILQA D + L + +   +   G DQ  ++    DL +R   
Sbjct: 131 -KSAKGGEGAASVGLFTYPILQAADIL-LYRPHYVPV---GEDQRQHLELTRDLAQRFNS 185

Query: 218 -TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              K F L  P +  A+           KM K+ S    + + +  P    +  R+
Sbjct: 186 RYKKTFRLPEPYILKATAKITDLQDPTSKMSKSASSPSGIVEMLDDPRVSAKKIRS 241


>gi|26345546|dbj|BAC36424.1| unnamed protein product [Mus musculus]
          Length = 528

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G        +    +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFIKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGVDQRKIFTFSEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|221118617|ref|XP_002158432.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 583

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 73/233 (31%), Gaps = 17/233 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           +  R    ++     +  + S+  +  Y G   T    H  +   ++ +    K+G +  
Sbjct: 65  IITRNL-QEVIGVDRMQAIISERPLRLYWGTATTGKP-HIAYFVPMIKIADFLKSGCEVT 122

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF-IKYGTGKTDALMLNNET 130
            L     + +               + ++   E  + +  +  +           +    
Sbjct: 123 ILFADLHAYL--------DNLKAPWELLKLRTEYYQAVIKAMLLSINVPLEKLKFVKGTD 174

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  S +Y+  + ++ +  + +          +  +  +LS     Y  LQA D   L   
Sbjct: 175 YQLSREYVLDVFKLSTIATEHDCKKAGCEVVKQVQHPALS--GLLYPGLQALDEEYL--- 229

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
            +   Q GG DQ             L   K   L +P++   +G KM  +   
Sbjct: 230 -NVDAQFGGVDQRKIFTFAEKYLPMLGYKKRIHLMNPMVPGLTGGKMSSSEED 281


>gi|213404004|ref|XP_002172774.1| tryptophanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212000821|gb|EEB06481.1| tryptophanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 395

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 73/244 (29%), Gaps = 18/244 (7%)

Query: 12  LSERGFIHQISNPRELDIL-CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG +    +   +  L   +     Y G   ++SS+H GH+   +   WLQ     P
Sbjct: 58  LLRRGAVFSHRDLDNILNLYEQKKPFYIYTGRGPSSSSMHLGHMVPFVFTKWLQDVFQVP 117

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE         +++  +  +      I  G       +  N  
Sbjct: 118 VVI------QLTD----DEKFLFKPKLTLEDCRKFARENAKDIIAVGFDPKKTFIFANTD 167

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +L    Y  +L  I    ++N+  +           + + F         +  F  +   
Sbjct: 168 YLGGAFYHTVL-RIARCITLNQARACFGFSDSDNIGK-IHFASIQAAPSFSSSFPHIFNG 225

Query: 191 YDC--RLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAI 245
                 L     DQ        D+  RLK  K     A   P L            + AI
Sbjct: 226 ATNVPCLIPCAIDQDPYFRLTRDVATRLKYKKPSLLHARFFPALQGPQTKMSASDDNSAI 285

Query: 246 WLNK 249
           ++  
Sbjct: 286 FMTD 289


>gi|149024033|gb|EDL80530.1| tyrosyl-tRNA synthetase [Rattus norvegicus]
          Length = 564

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 68/227 (29%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 49  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 106

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G             +
Sbjct: 107 ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFTKGTDY 159

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 160 QLSKEYTLDVYRLSSLVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 214

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 215 --VDAQFGGIDQRKIFTFAEKYLPTLGYSKRVHLMNPMVPGLTGSKM 259


>gi|71043618|ref|NP_001020867.1| tyrosyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|108860969|sp|Q4KM49|SYYC_RAT RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|68534287|gb|AAH98795.1| Tyrosyl-tRNA synthetase [Rattus norvegicus]
          Length = 528

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 68/227 (29%), Gaps = 17/227 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + + D + +     +       EN+ K     +     G             +
Sbjct: 71  ILFADLHAYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFTKGTDY 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y   +  + S  + +        V  +++           Y  LQA D   L   
Sbjct: 124 QLSKEYTLDVYRLSSLVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 179 --VDAQFGGIDQRKIFTFAEKYLPTLGYSKRVHLMNPMVPGLTGSKM 223


>gi|119497937|ref|XP_001265726.1| tryptophanyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119413890|gb|EAW23829.1| tryptophanyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 433

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 80/256 (31%), Gaps = 32/256 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG +    +    LD          Y G   ++ S+H GH        WLQ     P
Sbjct: 81  FMRRGIVFSHRDLNLILDHYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKWLQDVFDCP 140

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +      ++ D    DE     +  E+++  +  K      I  G       + ++  
Sbjct: 141 LVI------MLTD----DEKYMHSQKIEVEDAKKYAKANAKDIIAVGFDMKKTFIFSDFD 190

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-- 188
           ++    Y ++         + + ++  SVR       S +  EF++   Q+      +  
Sbjct: 191 FVGGAFYENIC-------RLAKRITINSVRGTFGFNDSNNVGEFHFCATQSATAFATSFP 243

Query: 189 ------KNYDCRLQM---GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTK 236
                 +     +        DQ        +  E++K  K   + A+  P L       
Sbjct: 244 HIFGTDRKKVSSIPCLIPCAIDQDPYFRQCREHAEKMKYKKPSLIHAIFLPALQGPGSKM 303

Query: 237 MGKTLSGAIWLNKEMT 252
                + AI++N    
Sbjct: 304 SASVETSAIYMNDAPN 319


>gi|7437494|pir||S77855 probable tyrosine-tRNA ligase (EC 6.1.1.1) - Mycoplasma capricolum
           (fragment)
          Length = 78

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +GG T +IGDPSF+   R +   Q++  NI KI       I           +NN  WL 
Sbjct: 8   IGGATGMIGDPSFKASERVLQTKQQVDHNINKISTQLKEIIP------TVSFVNNRDWLE 61

Query: 134 SIKYIDLLREIGSFFSV 150
            I  ID LR+IG  F++
Sbjct: 62  DISLIDFLRDIGKHFNL 78


>gi|158299412|ref|XP_319546.4| AGAP003315-PA [Anopheles gambiae str. PEST]
 gi|157013855|gb|EAA14646.4| AGAP003315-PA [Anopheles gambiae str. PEST]
          Length = 423

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 81/247 (32%), Gaps = 18/247 (7%)

Query: 9   LSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +  L  RG      +    L+ + +      Y G   ++ S+H GHL   ++  WLQ+  
Sbjct: 75  VHHLIRRGIFFSHRDLHTLLNAVEAGKKFYLYTGRGPSSDSMHLGHLVPFIVTKWLQEAF 134

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + +   +++++   +      I  G   +   + +
Sbjct: 135 DVPLVI-----------QLTDDEKTLWKDLTVEQSMRMARENAKDIIAIGFDPSKTFIFS 183

Query: 128 NETWLCS-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           N  ++    ++   +  I    + N++             + + F         +  F  
Sbjct: 184 NLDFMGQCPQFYQNIIRIQKCVTFNQVKGIFGFGDSDVIGK-IGFPAAQAAPAFSTTFPF 242

Query: 187 LAKNYDCRLQM-GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +       + +    DQ        D+  RL  PK   + +   P L  A         +
Sbjct: 243 IFGTDKLPVLIPCAIDQDPYFRMTRDVSPRLGFPKPALIHSSFFPALQGARTKMSASDTN 302

Query: 243 GAIWLNK 249
            A++L  
Sbjct: 303 SAVFLTD 309


>gi|72001474|ref|NP_507683.2| tryptophanyl (W) tRNA Synthetase family member (wrs-1)
           [Caenorhabditis elegans]
 gi|30962537|dbj|BAC76735.1| tryptophanyl-tRNA synthetase (cytosolic) [Caenorhabditis elegans]
 gi|33300482|emb|CAE17953.1| C. elegans protein Y80D3A.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|33300622|emb|CAB60439.2| C. elegans protein Y80D3A.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 417

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 76/246 (30%), Gaps = 23/246 (9%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG      +    LD          Y G   ++ SLH GHL   +   WLQ+    P
Sbjct: 80  MLRRGMFFAHRDLTAILDRKEQGKPFYLYTGRGASSGSLHLGHLVPFIFTKWLQEVFDVP 139

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++ E  +  +      I  G   T   + NN  
Sbjct: 140 LVI-----------QMTDDEKFLWKDMKVDEAKKMARENMKDIISVGFDPTKTFIFNNFD 188

Query: 131 WLCSIKYID----LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++C   Y +          +        + E    +       +   F     Q +    
Sbjct: 189 YMCPPFYENIVKIWKVVNTNQARAIFGFTPEDCLGKAAFPAVEAAPCFASSFPQIFG--- 245

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
             +N    L     DQ        D+  RLK  K   +F+   P LT A         + 
Sbjct: 246 -KRNDIPCLIPCAIDQDPFFRMTRDVAPRLKASKPSLIFSTFLPALTGAQTKMSASEPNT 304

Query: 244 AIWLNK 249
            I+L+ 
Sbjct: 305 CIFLSD 310


>gi|328767591|gb|EGF77640.1| hypothetical protein BATDEDRAFT_35960 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 425

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 79/247 (31%), Gaps = 24/247 (9%)

Query: 12  LSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
              RG     S+      LD          Y G   ++ S+H GH+   +   WLQ    
Sbjct: 75  FLRRGLF--FSHRELNLILDKYEQGKPFYLYTGRGPSSGSMHVGHMVPFIFCKWLQDVFK 132

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            P+ +       + D    DE       ++I+++   +       + +G       + +N
Sbjct: 133 APLVV------QLTD----DEKFLFTPDRKIEDSRVFMIENAKDIMSFGFDPERTFIFSN 182

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVEL 187
             ++C   Y ++++      ++   +S  +           L F+        +  F  +
Sbjct: 183 LEYMCPPFYQNIVKIS---KTITASVSRATFGFTDSDNVGKLHFVSVQAAPSFSNTFPHI 239

Query: 188 AKNYD--CRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
                    L     DQ        D+  +LK PK   + A   P L            +
Sbjct: 240 FGPKGDVPCLIPCAIDQDPYFRLTRDVASKLKYPKPALIHAKFFPALQGPGTKMSASNPN 299

Query: 243 GAIWLNK 249
            AI++N 
Sbjct: 300 SAIYIND 306


>gi|171677871|ref|XP_001903886.1| hypothetical protein [Podospora anserina S mat+]
 gi|170937004|emb|CAP61662.1| unnamed protein product [Podospora anserina S mat+]
          Length = 397

 Score = 57.5 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 78/252 (30%), Gaps = 25/252 (9%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K +    L+E   I ++ +          G    Y G   T    H G+L   + +   
Sbjct: 15  IKENLAEFLNE-EIIKKVVDE--------GGHPKIYWGTATTGRP-HCGYLVPAIKMAQF 64

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G +   L+      +       ++ +      +         I +     G      
Sbjct: 65  LAAGCELTVLLADIHGFL-------DNLKAPLELVMHRAEFYRYTISTLLGAVGVSTEKL 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++   ++  S +Y+  + ++ S  S +      +   +      LS     Y ILQ  D
Sbjct: 118 KIVLGSSYQKSAEYVMDVYKMASIISEHDAKKAGAEIVKQTDNAPLS--GLLYPILQVLD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
              L    D   Q GG DQ    I   +   +L   +   L +P++    G KM  +   
Sbjct: 176 EQYL----DVDAQFGGVDQRKLFIAAKEWLPKLGYKERAHLMNPMVPGLHGGKMSSS--D 229

Query: 244 AIWLNKEMTSPY 255
                  + SP 
Sbjct: 230 PDSKIDLLDSPE 241


>gi|320163051|gb|EFW39950.1| tryptophanyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 461

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 29/254 (11%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L    +RG      +    LD          Y G   ++ S+H GHL   ++   +Q   
Sbjct: 123 LHSFLKRGIFFSHRDLHGVLDRYEKGERFYLYTGRGPSSDSMHVGHLIPFLMTKAMQDMF 182

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + ++  +++     +      I  G       + +
Sbjct: 183 GVPLVI-----------QMTDDEKFLWKNMTLEDGYRFTRENAKDIIACGFDIKKTFIFS 231

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ------- 180
           N  ++    Y ++L        + +++S  +V+      +S +  +F +   Q       
Sbjct: 232 NLKFMGGAFYENIL-------RIQKLVSEHTVKKMFGFSESDNIGKFGFPANQASPAFSN 284

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKM 237
            + F+  AK+    L     DQ        D+  RL   K   + +   P L  +     
Sbjct: 285 TFPFIFGAKSTVDCLIPCAIDQDPYFRMTRDVAPRLGYKKPALVHSKFFPALQGSQSKMS 344

Query: 238 GKTLSGAIWLNKEM 251
              L+ +I+L    
Sbjct: 345 ASDLTTSIFLTDTP 358


>gi|150020223|ref|YP_001305577.1| tryptophanyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149792744|gb|ABR30192.1| tryptophanyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 331

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 26/216 (12%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ  GH+    +    ++                 E 
Sbjct: 6   GMRPTGK-LHIGHLFGALQSWVKLQNEGHECFYFVADWHAL------------TTHYNET 52

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            E ++    +  S++  G     + +          +   L     S   + R+ +++ +
Sbjct: 53  DEIVKNSVELVKSYLAVGIDPEKSTIFIQSEIKEHAELTLLFSMFVSVSRLERVPTYKEI 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + +LK +   +     Y +LQA D + +       +   G DQ  +I    ++  R    
Sbjct: 113 KQQLKDKDLSNAGFLIYPVLQASDIL-IYLAEGVPV---GEDQVYHIELTREIARRFNYL 168

Query: 220 KLFALT--------SPLLTTASGTKMGKTLSGAIWL 247
                T         P L    G KM K+    I L
Sbjct: 169 YKEVFTEPQPILSKVPKLLGTDGRKMSKSYGNIIPL 204


>gi|261199522|ref|XP_002626162.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594370|gb|EEQ76951.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 410

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 17/215 (7%)

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H G+   ++ L    + G     L+      +                 +    +  + +
Sbjct: 65  HCGYFCPIVKLAHFLRAGCHVKILLADIHGFL--------DNLKAPIDLVNFRAKYYRYV 116

Query: 110 FSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
            ++ ++           +    +  S KY   L  + S  + +      +   +      
Sbjct: 117 ITALLEAIHVPIDKLEFVLGSDFQLSPKYTMDLFRLSSVVTEHDAKKAGAEVVKQVDNAP 176

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           LS     Y ++QA D   L    D   Q GG DQ       ++   R+   +   L SP+
Sbjct: 177 LS--GLIYPLMQALDEEHL----DVDAQFGGVDQRKIFTLALETLPRIGYKERAHLMSPM 230

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +   +G KM  + S        + +P    +  R 
Sbjct: 231 VPGLAGGKM--SASDPDSKIDILDTPETVKKKLRK 263


>gi|156937141|ref|YP_001434937.1| tyrosyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566125|gb|ABU81530.1| tyrosyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 378

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHK 69
           L  R    ++  P  L     QG  +  YIG++++   +H G  +  +  +  LQ+ G K
Sbjct: 7   LIMREPTEEVLTPELLKEYIEQGVPLKHYIGFEISG-FVHLGTGIVTMRKVADLQRAGVK 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNN 128
               +    S I      D           +  +   K      +K  G       ++  
Sbjct: 66  TTLFLADYHSWINKKLGGD------LDTIKRVALGYFKEALLQSLKAVGGDPESVEVILA 119

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVEL 187
             +   +        +     +       S+     K  +S++F +  Y+ +Q  D   L
Sbjct: 120 SEFFEKLGIKYFENFLRVSNRLTLARVKRSITIMGRKEGESVNFGQLVYVPMQVADIFSL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGID 211
                  L  GG DQ    +  I+
Sbjct: 180 ----GVNLAHGGMDQRKAHVIAIE 199


>gi|71023529|ref|XP_761994.1| hypothetical protein UM05847.1 [Ustilago maydis 521]
 gi|46101559|gb|EAK86792.1| hypothetical protein UM05847.1 [Ustilago maydis 521]
          Length = 477

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 66/225 (29%), Gaps = 23/225 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L  R     +     +  +  +    ++AY G   T    H G+L  L  +    + G +
Sbjct: 15  LITRDLDEVL-GADIIKSILEKDERPLSAYWGTAPTGRP-HVGYLVPLTKIADFLRAGVQ 72

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML--- 126
              L+    + +               + ++  +   + + ++  K     TD L+    
Sbjct: 73  VKILLADIHAFL--------DNLKAPIELVRHRVNYYRHVLTAVFKAIGVPTDRLVFVVG 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++     +    +            +    E V+               Y  LQA D   
Sbjct: 125 SSYQLTEAYNMDNYRLCASVTEHDAKKAGAEVVKQVASP----LLSGLLYPGLQALDEQY 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
           L    D  +Q GG DQ            +L   K   L + ++  
Sbjct: 181 L----DVDMQFGGVDQRKIFTFAEQYLPKLGYKKRAHLMNAMVPG 221


>gi|219129493|ref|XP_002184922.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403707|gb|EEC43658.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 405

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 77/265 (29%), Gaps = 22/265 (8%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L  + +   +  Y G   ++ S+H GHL   +   WLQ     P
Sbjct: 50  FLRRGMFFSHRDLDTLLRQVEAGAPMYLYTGRGPSSQSMHLGHLIPFLFTKWLQDALDVP 109

Query: 71  ISLMGGGTSIIGD--PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + +      +  D    F+           +      ++      I  G       + ++
Sbjct: 110 LVI-----QMTDDEKFLFKGHYDDQTGDNLLDFQSLTMEN-ARDIIACGFDYNKTFLFSD 163

Query: 129 ETWLCSIKYIDLLRE-IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             ++ S+    +      +  +VN +  F+   +  K          ++           
Sbjct: 164 LDYVGSMYPNIVRIWKAVTTNTVNGIFGFDGSSNIGKIAFPAIQAAPSFASSFPVVLEAD 223

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---------LFALTSPLLTTASGTKMG 238
             +    L     DQ        D+  +L   +         + +   P L  A G    
Sbjct: 224 RNSNHLCLIPCAIDQDPYFRMTRDVAHKLVHKQHGLGGKPALIHSKFFPPLQGAEGKMSS 283

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRN 263
              + AI+L     SP +  +  + 
Sbjct: 284 SNTNSAIFLT---DSPDDIERKIKQ 305


>gi|238495494|ref|XP_002378983.1| tryptophanyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|317149666|ref|XP_001823576.2| tryptophan--tRNA ligase WRS1 [Aspergillus oryzae RIB40]
 gi|220695633|gb|EED51976.1| tryptophanyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 433

 Score = 57.1 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 80/257 (31%), Gaps = 36/257 (14%)

Query: 12  LSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
              RG +   S+      LD          Y G   ++ S+H GH        WLQ    
Sbjct: 81  FMRRGIV--FSHRELTTILDRYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKWLQDVFD 138

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            P+ +      ++ D    DE     +  ++++     K      I  G       + ++
Sbjct: 139 CPLVI------MLTD----DEKFMHSQKIDVEDAKRYTKANAMDIIAVGFDMKKTFIFSD 188

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             ++    Y ++         + + ++  S++       S +  EF++   Q+      +
Sbjct: 189 FDFVGGAFYENMC-------RMAKRITINSIKGTFGFNDSNNIGEFHFCATQSASAFATS 241

Query: 189 --------KNYDCRLQM---GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASG 234
                   +     +        DQ        +  E++K  K   + A+  P L     
Sbjct: 242 FPHIFGTDRKKVSSIPCLIPCAIDQDPYFRQCRENAEKMKYKKPSLIHAIFLPALQGPGS 301

Query: 235 TKMGKTLSGAIWLNKEM 251
                  + AI++N   
Sbjct: 302 KMSASVDTSAIFMNDTP 318


>gi|46126117|ref|XP_387612.1| hypothetical protein FG07436.1 [Gibberella zeae PH-1]
          Length = 398

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 80/255 (31%), Gaps = 18/255 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +      ++      IL        Y G   T    H G+L   + +      G +  
Sbjct: 11  LIKENLAEVLNPEIIEGILAEGRSPKIYWGTATTGRP-HCGYLVPAVKIAQYLAAGCEVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L+      +               + +++  E  K +  S +K  G        +   +
Sbjct: 70  VLLADIHGFL--------DNLKAPIELVEKRAEYYKFVVESMLKSCGVSTEQLRFVLGSS 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  +  Y+  L  + S  S +      +   +      LS     Y +LQ  D   L   
Sbjct: 122 YQKTSGYVMDLYRLSSVVSEHDAKKAGAEVVKQTGNAPLS--GLMYPLLQVLDEQYL--- 176

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            DC +Q GG DQ        +   +L   K   L +P++   +G KM  +          
Sbjct: 177 -DCDIQFGGVDQRKLFAAATEWLPKLGYRKRAHLMNPMVAGLNGNKMSSSDEN--SKIDL 233

Query: 251 MTSPYNFWQYWRNID 265
           + SP    +  R  +
Sbjct: 234 LDSPEAVTKKIRKAE 248


>gi|207345011|gb|EDZ71969.1| YGR185Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 394

 Score = 56.7 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 68/221 (30%), Gaps = 20/221 (9%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 20  LQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVTVLLA 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCS 134
              + +               + +    +  +    + ++           +   ++  +
Sbjct: 79  DLHAFL--------DNMKAPLEVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLT 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
             Y   +  + +  S N        V  ++            Y ++QA D     +  D 
Sbjct: 131 PDYTMDIFRLSNIVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDE----QFLDV 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
             Q GG DQ    +   +    L   K   L +P++   + 
Sbjct: 184 DCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQ 224


>gi|151943462|gb|EDN61773.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190406803|gb|EDV10070.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|256269801|gb|EEU05066.1| Tys1p [Saccharomyces cerevisiae JAY291]
 gi|259146687|emb|CAY79944.1| Tys1p [Saccharomyces cerevisiae EC1118]
 gi|323308945|gb|EGA62176.1| Tys1p [Saccharomyces cerevisiae FostersO]
 gi|323337482|gb|EGA78730.1| Tys1p [Saccharomyces cerevisiae Vin13]
 gi|323348452|gb|EGA82697.1| Tys1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354857|gb|EGA86690.1| Tys1p [Saccharomyces cerevisiae VL3]
          Length = 394

 Score = 56.7 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 68/221 (30%), Gaps = 20/221 (9%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 20  LQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVTVLLA 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCS 134
              + +               + +    +  +    + ++           +   ++  +
Sbjct: 79  DLHAFL--------DNMKAPLEVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLT 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
             Y   +  + +  S N        V  ++            Y ++QA D     +  D 
Sbjct: 131 PDYTMDIFRLSNIVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDE----QFLDV 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
             Q GG DQ    +   +    L   K   L +P++   + 
Sbjct: 184 DCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQ 224


>gi|6321624|ref|NP_011701.1| Tys1p [Saccharomyces cerevisiae S288c]
 gi|549037|sp|P36421|SYYC_YEAST RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|149241068|pdb|2DLC|X Chain X, Crystal Structure Of The Ternary Complex Of Yeast Tyrosyl-
           Trna Synthetase
 gi|173120|gb|AAB59329.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1323328|emb|CAA97211.1| TYS1 [Saccharomyces cerevisiae]
 gi|1430951|emb|CAA67529.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285812379|tpg|DAA08279.1| TPA: Tys1p [Saccharomyces cerevisiae S288c]
          Length = 394

 Score = 56.7 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 68/221 (30%), Gaps = 20/221 (9%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 20  LQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVTVLLA 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCS 134
              + +               + +    +  +    + ++           +   ++  +
Sbjct: 79  DLHAFL--------DNMKAPLEVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLT 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
             Y   +  + +  S N        V  ++            Y ++QA D     +  D 
Sbjct: 131 PDYTMDIFRLSNIVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDE----QFLDV 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
             Q GG DQ    +   +    L   K   L +P++   + 
Sbjct: 184 DCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQ 224


>gi|310794820|gb|EFQ30281.1| tRNA synthetase class I [Glomerella graminicola M1.001]
          Length = 399

 Score = 56.7 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 77/249 (30%), Gaps = 17/249 (6%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP  ++ + ++G     Y G   T    H G+    + L      G +   L+  
Sbjct: 18  LAEVMNPEIIEKILAEGRNPKIYWGTATTGRP-HCGYFVPAIKLAQFLAAGCELTVLLAD 76

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
               +       ++ +       Q        I +     G        +   ++  S +
Sbjct: 77  IHGFL-------DNLKAPIELVEQRAKFYKFAITNILNAVGVSTEKLKFVLGSSYQKSPE 129

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           YI  + ++ S  S        +   +      +S     Y +LQ  D   L        Q
Sbjct: 130 YIMDVYKMSSLISERDAKKAGAEVVKQSDNAPMS--GLLYPVLQVCDEEHL----GVDAQ 183

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
            GG DQ        +   ++       L +P++   +G KM  +          + +P  
Sbjct: 184 FGGMDQRKLFAAATEWLPKVGYQVRAHLLNPMVPGLNGGKMSSS--DPDSKIDLLDAPEV 241

Query: 257 FWQYWRNID 265
             +  R  +
Sbjct: 242 VQKKLRKAE 250


>gi|156062356|ref|XP_001597100.1| hypothetical protein SS1G_01294 [Sclerotinia sclerotiorum 1980]
 gi|154696630|gb|EDN96368.1| hypothetical protein SS1G_01294 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 416

 Score = 56.7 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 17/248 (6%)

Query: 18  IHQISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ +   +D   L  +  +  Y G   T    H G+   ++ +  L + G     L+ 
Sbjct: 18  LAEVLDGDIIDNVILKEKRPLKVYWGTATTGRP-HCGYFVPMIKIAELLRAGCTVKVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
                + D    +    +   +   +  E++       +     + + ++ ++       
Sbjct: 77  DIHGYL-D----NMKAPLELVEYRAKYYERVIKSALRAVGVDLSRLEFVLGSSYQLNKEY 131

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                  E  +  +V +    E V+               Y ++QA D   L    D   
Sbjct: 132 TMDRFKLEGITRINVAQKAGAEVVKQTDDPTLG----GLIYPLMQALDEQYL----DVDA 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           Q GG DQ        +   ++       L + ++          + S A      +  P 
Sbjct: 184 QFGGVDQRKIFTFAKENLPKINYKVRAHLMNTMVPGLG-EAAKMSSSDADSKIDLLDGPE 242

Query: 256 NFWQYWRN 263
              +  + 
Sbjct: 243 AVEKKLKK 250


>gi|312099257|ref|XP_003149299.1| tryptophanyl-tRNA synthetase [Loa loa]
 gi|307755536|gb|EFO14770.1| tryptophanyl-tRNA synthetase [Loa loa]
          Length = 338

 Score = 56.7 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 75/252 (29%), Gaps = 14/252 (5%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG      +    LD L  +     Y G   ++ SLH GHL   +   WLQ     P
Sbjct: 1   MLRRGLFFAHRDLSLILDRLEQKKPFYLYTGRGPSSGSLHLGHLIPFVFTKWLQDVFDVP 60

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       I D     + + + ++  + E            I  G       +  +  
Sbjct: 61  LII------QITD-----DEKFLWKNHTLDEIKRMANENIKDIIACGFSPDKTFIFLDTE 109

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           ++C   + ++L+      ++N+  S           ++            +   +   K 
Sbjct: 110 YMCPSFFTNILKIW-KLVTLNQARSIFGFTGEDSMGKAAFPSVEAAPCFSSSFPLIFGKR 168

Query: 191 YDC-RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            D   +     DQ        D+  RLK  K   + S  L    G +     S A     
Sbjct: 169 EDIPCIIPCAIDQDPYFRMCRDVAPRLKYLKPAMIYSSFLPALQGAQSKMAASDATTCIY 228

Query: 250 EMTSPYNFWQYW 261
              +P       
Sbjct: 229 LDDAPKQIKTKI 240


>gi|317149984|ref|XP_001823709.2| tyrosyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
          Length = 381

 Score = 56.7 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 72/232 (31%), Gaps = 14/232 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L        ++     +IL  +     Y G   T    H G+    + +  L +     +
Sbjct: 11  LISENLAEILNPEIIENILIEKRNPRIYWGTATTGRP-HIGYFLAALKIAQLLRAQCDVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + +       ++ +              K I +     G        +   ++
Sbjct: 70  VLLADVHAFL-------DNLKAPLELVENRAQYYRKIITAILESVGVPTDKLEFVLGSSY 122

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S +Y+  +  + S  S        +   +      LS     Y +LQ  D   L    
Sbjct: 123 QKSPEYVMDVYRLSSLISEGDAKKAGAEVVKQTENAPLS--GLLYPVLQVLDEEHLK--- 177

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
              +Q+GG DQ        +   ++   K   L +P+++   G KM  ++  
Sbjct: 178 -VDVQLGGMDQRKLFTAATEWLPKIGYRKRAHLINPMISGLKGAKMSSSVED 228


>gi|170034286|ref|XP_001845005.1| tryptophanyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167875638|gb|EDS39021.1| tryptophanyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 416

 Score = 56.7 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    L+++ +      Y G   ++ S+H GHL   ++  WLQ+    P
Sbjct: 72  LIRRGIFFSHRDLHTLLNMVEAGKKFYLYTGRGPSSDSMHLGHLVPFIVTKWLQEAFDVP 131

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   ++++++  +      I  G       +  N  
Sbjct: 132 LVI-----------QLTDDEKTLWKDLTVEQSMKMARENAKDIIAIGFDVNKTFIFANLD 180

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++     +   +  I    + N++             + + F         +  F  +  
Sbjct: 181 YMGRCAAFYQNIIRIQKCVTFNQVKGIFGFGDSDVIGK-IGFPAAQAAPAFSTTFPFIFG 239

Query: 190 NYDCRLQM-GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           +    + +    DQ        D+  RL  PK   + +   P L  A         + A+
Sbjct: 240 SDKLPVLIPCAIDQDPYFRMTRDVSPRLGFPKPALIHSSFFPALQGAKTKMSASDANSAV 299

Query: 246 WLNKEM 251
           +L    
Sbjct: 300 FLTDTP 305


>gi|309807341|ref|ZP_07701310.1| tyrosine--tRNA ligase domain protein [Lactobacillus iners LactinV
           03V1-b]
 gi|308166323|gb|EFO68533.1| tyrosine--tRNA ligase domain protein [Lactobacillus iners LactinV
           03V1-b]
          Length = 57

 Score = 56.7 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 18/45 (40%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            S  +AR  + + AI +N +   +    + + +      + +  G
Sbjct: 3   KSKRQAREDINNGAIYVNGTRQDDCDFLVDVPNSFEGKFVIIRRG 47


>gi|145527933|ref|XP_001449766.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417355|emb|CAK82369.1| unnamed protein product [Paramecium tetraurelia]
          Length = 156

 Score = 56.7 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL-QKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           V+ Y G++ T  S   G+   ++ L  L Q    +PI+++G  T  +G PSF+ +  +  
Sbjct: 16  VSVYCGFNPTGHSFLLGNFVSILNLEKLAQLDFFQPIAIVGYATIQLGYPSFKMKQSKRS 75

Query: 95  RSQEIQEN 102
               IQEN
Sbjct: 76  DLIAIQEN 83


>gi|119720562|ref|YP_921057.1| tyrosyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119525682|gb|ABL79054.1| tyrosyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 388

 Score = 56.3 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 66/212 (31%), Gaps = 15/212 (7%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGGGTSII 81
           P  L  L   G  +  YIG++++   +H G  L  +  +  LQ  G K    +    S I
Sbjct: 32  PDRLKSLVENGVPLVHYIGFEISGL-VHLGTGLISMQKVADLQSVGVKTKVFLADYHSWI 90

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALMLNNETWLCSIKYIDL 140
                 D           +      K      ++  G        +        +     
Sbjct: 91  NRKLGGD------LDVIRRVAGGYFKEALRVSLRIVGGDPDKTEFILGSELYEKLGLDYF 144

Query: 141 LREIGSFFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
              +             SV        ++LSF +  Y+ +Q  D      +    +  GG
Sbjct: 145 TNVLRVSMETTLSRVRRSVTILGRSESEALSFAQLLYVPMQVADIF----SMGVNIPHGG 200

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            DQ    +  I++GE+L   K  AL   LL  
Sbjct: 201 MDQRKAHVIAIEVGEKLFGYKPVALHHHLLPG 232


>gi|164423866|ref|XP_958548.2| tyrosyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|157070264|gb|EAA29312.2| tyrosyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 404

 Score = 56.3 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 22/252 (8%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +I NP  ++ +  +G     Y G        H G+L   + +  L   G   I L+  
Sbjct: 37  LAEILNPEIIEKVIDEGRAPRIYWGR-P-----HCGYLVPAIKIAQLLAAGCHVIVLLAD 90

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             +++       ++ +              + I +     G        +   ++  S  
Sbjct: 91  IHAVL-------DNLKSTVELVGYRAKYYERTITALLKAVGVPTDKLEFVLGSSYQKSPD 143

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           YI  + ++ +  S +      +   +      LS     Y ILQ  D   L        Q
Sbjct: 144 YIMDVYKLATLVSEHDAKKAGAEVVKQSDNAPLS--GLLYPILQVLDEEYLK----VDAQ 197

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
            GG DQ        D   RL   +   + +P++    G+KM  +          + +P  
Sbjct: 198 FGGVDQRKLFAAAKDWLPRLGYKERAHIMNPMVPGLQGSKMSSS--DPDSKIDLLDAPDV 255

Query: 257 FWQYWRNIDDAD 268
             +  R  + A 
Sbjct: 256 VTKKIRKAEAAP 267


>gi|255944635|ref|XP_002563085.1| Pc20g05510 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587820|emb|CAP85880.1| Pc20g05510 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 435

 Score = 56.3 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 71/234 (30%), Gaps = 19/234 (8%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD          Y G   ++ S+H GH        WLQ     P+ +      ++ D   
Sbjct: 97  LDKHEKGEPFFLYTGRGPSSDSMHVGHTVPFEFTKWLQDVFDVPLVI------MMTD--- 147

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            DE     +  EI+++    K      I  G       + ++  ++    Y ++   +  
Sbjct: 148 -DEKFMHSQKIEIEDSKRYTKANAKDIIAVGFDMKKTFIFSDFEFIGGAFYENMC-RMAK 205

Query: 147 FFSVNRMLSFESVRS-----RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
             ++N++                   + S   F+      +   +        L     D
Sbjct: 206 RITINQVKGTFGFNDSNNIGEFHFCATQSAAAFSTSFPHIFGTEKKKVASIPCLIPCAID 265

Query: 202 QWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           Q        +  E++K  K   + ++  P L            S AI++N    
Sbjct: 266 QDPYFRQCREHAEKMKFKKPSLIHSIFLPALQGPGSKMSASVDSSAIFMNDTPN 319


>gi|238499123|ref|XP_002380796.1| tyrosyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220692549|gb|EED48895.1| tyrosyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 381

 Score = 56.3 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 72/232 (31%), Gaps = 14/232 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L        ++     +IL  +     Y G   T    H G+    + +  L +     +
Sbjct: 11  LISENLAEILNPEIIENILIEKRNPRIYWGTATTGRP-HVGYFLAALKIAQLLRAQCDVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + +       ++ +              K I +     G        +   ++
Sbjct: 70  VLLADVHAFL-------DNLKAPLELVENRAQYYRKIITAILESVGVPTDKLEFVLGSSY 122

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S +Y+  +  + S  S        +   +      LS     Y +LQ  D   L    
Sbjct: 123 QKSPEYVMDVYRLSSLISEGDAKKAGAEVVKQTENAPLS--GLLYPVLQVLDEEHLK--- 177

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
              +Q+GG DQ        +   ++   K   L +P+++   G KM  ++  
Sbjct: 178 -VDVQLGGMDQRKLFTAATEWLPKIGYRKRAHLINPMISGLKGAKMSSSVED 228


>gi|212531661|ref|XP_002145987.1| tyrosyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210071351|gb|EEA25440.1| tyrosyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 383

 Score = 56.3 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 79/257 (30%), Gaps = 18/257 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L        ++      IL        Y G   T    H G+ T  + +  L   G + 
Sbjct: 10  ELIRENLDEILNPEIIESILAEGRNPRIYWGTATTGRP-HTGYFTPAIKIAQLLAAGCEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
           + L+    + +               + ++  ++  + +  + ++  G        +   
Sbjct: 69  VILLADVHAFL--------DSMKAPLELVENRVKYYERVIRAILEAVGVSTEKLEFVLGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  +  Y+  +  + +  + +      +   +      LS     Y ILQ  D   L  
Sbjct: 121 SYQRNSDYVMDVYRLAALTTEHDARKAGAEIVKQSNNAPLS--GLLYPILQVLDEEYLK- 177

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                 ++GG DQ        +   +L   K   L +P++   +G KM  +         
Sbjct: 178 ---VDAELGGVDQRKLFTAATEWLPKLGYRKRAHLVTPMVAGLNGGKMSSS--DPDSKID 232

Query: 250 EMTSPYNFWQYWRNIDD 266
            +  P    +  R  + 
Sbjct: 233 LLDPPDVVAKKVRKSEA 249


>gi|330799807|ref|XP_003287933.1| tryptophanyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325082067|gb|EGC35562.1| tryptophanyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 400

 Score = 56.3 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 85/264 (32%), Gaps = 34/264 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      + +E LD   +      Y G   ++ SLH GHL   +   +LQ   + P
Sbjct: 62  FLRRGIFFSHRDLKEILDHHEAGKKWYLYTGRGPSSGSLHFGHLLPFLFTKYLQDAFNVP 121

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              ++ + + +   I+E+IE         I  G       + +N  
Sbjct: 122 LVV-----------QMTNDEKFLWKGITIEESIEYTHNNVKDIIALGFDVQKTFIFSNLD 170

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFV 185
           ++          +I    ++N+      +++    + S +  +F +  +QA       F 
Sbjct: 171 YI--QYLYPNAIKISRCVNLNQ------IKNIFGFQDSDAVGKFTFPPIQAAPCFPDSFP 222

Query: 186 ELAKNYDCRLQM------GGSDQWGNIICGIDL-GERLKTPK--LFALTSPLLTTASGTK 236
            +    D  ++          DQ        D+           + +   P L   +   
Sbjct: 223 HIFDPKDPEIKAVRCLIPCAIDQDPYFRMTRDVAQRLGYNKPSLIHSKFFPALQGHNTKM 282

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQY 260
               L+ A++L+       +  + 
Sbjct: 283 SASDLNSAVYLSDTPQQVKDKIKK 306


>gi|332374266|gb|AEE62274.1| unknown [Dendroctonus ponderosae]
          Length = 413

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 75/254 (29%), Gaps = 28/254 (11%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +  L  RGF     +    L           Y G   ++SS+H GHL    L  WLQ   
Sbjct: 75  VHHLLRRGFFFSHRDMHSILTRYEQGKPFYLYTGRGPSSSSMHLGHLIPFTLCKWLQDVF 134

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           + P+ +              D+ + + +   ++E  +         I  G       +  
Sbjct: 135 NCPLVI-----------QLTDDEKTLWKDLTVEEAYKMALENAKDIIACGFDINKTFIF- 182

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              +              +   + + ++F  V+     + S    +  +  +QA   +  
Sbjct: 183 -SDFT---YIGQRPEFYRNMIRIQKCVTFNQVKGIFGFDDSTVIGKIAFPAVQATPALST 238

Query: 188 A-------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKM 237
           +       K   C +     DQ        D+  R+   K     +   P L  A     
Sbjct: 239 SFPDIFGTKKIPCLIPC-AIDQDPYFRMTRDVCPRIGFDKPALLHSKFFPALQGAKTKMS 297

Query: 238 GKTLSGAIWLNKEM 251
               +  I++N   
Sbjct: 298 ASEANSTIFMNDTP 311


>gi|281351780|gb|EFB27364.1| hypothetical protein PANDA_010841 [Ailuropoda melanoleuca]
          Length = 510

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 16/220 (7%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            ++    +L  +  +  +  Y G   T    H  +   +  +    K G +   L     
Sbjct: 1   QEVLGEEKLKEVLKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADLH 59

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + + D + +     +       EN+ K     +     G        +    +  S +Y 
Sbjct: 60  AYL-D-NMKAPWELLELRTNYYENVIK-----AMLESIGVPLEKLKFVKGTDYQLSKEYT 112

Query: 139 DLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             +  + S  + +        V  +++           Y  LQA D   L        Q 
Sbjct: 113 LDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK----VDAQF 165

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           GG DQ             L   K   L +P++   +G+KM
Sbjct: 166 GGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 205


>gi|212544882|ref|XP_002152595.1| tyrosyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210065564|gb|EEA19658.1| tyrosyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 378

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 88/251 (35%), Gaps = 19/251 (7%)

Query: 18  IHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP  ++ +  +G     Y G   T    H+G+    + +  L   G + + L+  
Sbjct: 16  LQEVLNPELIESILEKGGTPRIYWGTATTGRP-HSGYFVPAIKIAQLLAAGCEVVILLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSI 135
             + +               + ++  ++  + +  + ++  G        +   ++  S 
Sbjct: 75  VHAFL--------DSMKAPLELVENRVKYYEKVIRAILEAVGVSTEKLEFVLGSSYQRSS 126

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
           +Y+  +  + +  S +      +   +      LS     Y ILQ  D   L        
Sbjct: 127 EYVMDVYRLAALTSEHDAKKAGAEIVKQSANAPLS--GLLYPILQVLDEEYLK----VDA 180

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           ++GG DQ    +   +   +L   K   L +P++   +G KM  ++         + SP 
Sbjct: 181 ELGGLDQRKLFVAATEWLPKLGYRKRAHLVTPMVAGLNGGKMSSSIED--SKIDLLDSPD 238

Query: 256 NFWQYWRNIDD 266
              +  R  + 
Sbjct: 239 AVAKKIRKSEA 249


>gi|66818755|ref|XP_643037.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|60471150|gb|EAL69118.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 383

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 81/256 (31%), Gaps = 32/256 (12%)

Query: 11  ILSERG-----FIHQ----ISNPRELDILCS-QGVVTAYIGYDLTASSLHA--GHLTQLM 58
            LSER       I Q    I +   L  L + +  +  Y G++ +   +H   G L  + 
Sbjct: 34  ELSERNKERLALIKQVGEEIVSEESLIKLLNGKEKLRCYDGFEPSGR-MHIAQGILKSIN 92

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           +   + K G   I  +    +++ +   +         +  Q  IE  K         G 
Sbjct: 93  V-NRMTKAGCTFIFWVADWFAMLNN---KMNGDLNKIRKVGQYMIEIWKAT-------GM 141

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYM 177
              +   L +   +        LR +      N     +  +      E  L   +  Y 
Sbjct: 142 DMENVEFLWSSDEINKNPNDYWLRVMDIARKFNVPRIKKCSQIMGRNEEDDLMCAQLLYP 201

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASG 234
            +Q  D   L       +   G DQ    +  I+  +++K   K   ++  +L       
Sbjct: 202 CMQCADIFYLK----ADICQLGMDQRKVNMLAIEYCDKVKIKNKPIIVSHHMLSGLKEGQ 257

Query: 235 TKMGKTLSGAIWLNKE 250
            KM K+   +    ++
Sbjct: 258 EKMSKSDPESAIFMED 273


>gi|323357078|ref|YP_004223474.1| tryptophanyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273449|dbj|BAJ73594.1| tryptophanyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 334

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 72/243 (29%), Gaps = 35/243 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESR 91
               Y G   +A SL  G+    L+    LQ   +     +    ++   GDP      R
Sbjct: 3   QQRLYSGMQPSADSLQIGNYIGALLQWRQLQDE-YDAFFSVVDLHALTQPGDP----AER 57

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R    +   + I                ++         W        +L  +  F    
Sbjct: 58  REKTRRTAAQYIAAG---IEPSRSTLYVQSHVPAHAELQW--------VLSTLTGFGEAG 106

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S      + +   F Y +L A D +     Y   +   G DQ  +I    D
Sbjct: 107 RMTQFKD-KSARYGTDATNVGLFTYPVLMAADIL----LYQTDVVPVGDDQKQHIELTRD 161

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L ER      + F +  P++   +           KM K+      +   +  P    + 
Sbjct: 162 LAERFNQRFGETFTMPKPMIQRETARIYDLQNPTSKMSKSAESDAGVLWMLDEPKVSAKK 221

Query: 261 WRN 263
              
Sbjct: 222 IMR 224


>gi|307203219|gb|EFN82374.1| Tryptophanyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 408

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 71/232 (30%), Gaps = 25/232 (10%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L++         Y G   ++ ++H GHL   M   WLQ   + P+ +             
Sbjct: 83  LNLYEQGKPFYLYTGRGPSSDAMHLGHLIPFMFCKWLQDIFNVPLII-----------QL 131

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + ++ +I++ I          I  G       + +N          +      +
Sbjct: 132 TDDEKAIWKNIKIEDAIRLAYTNARDIIACGFNPDKTFIFSNLE-----HIGNNPAFYQN 186

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE------LAKNYDCRLQMGGS 200
              + R ++F  V+       S S  +  +   QA   V               L     
Sbjct: 187 MIRIQRCVTFNQVKGIFGFGDSDSIGKIAFPPTQAAPAVASSFPFIFRDAKVHCLIPCAI 246

Query: 201 DQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DQ        D+  +L  PK     +   P L  +         + AI+L  
Sbjct: 247 DQDPYFRMTRDVAPKLGFPKPALLHSTFFPALQGSKTKMSASDSNTAIFLTD 298


>gi|239615534|gb|EEQ92521.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 410

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 17/215 (7%)

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H G+   ++ L    + G     L+      +                 +    +  + +
Sbjct: 65  HCGYFCPVVKLAHFLRAGCHVKILLADIHGFL--------DNLKAPIDLVNFRAKYYRYV 116

Query: 110 FSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
            ++ ++           +    +  S KY   L  + S  + +      +   +      
Sbjct: 117 ITALLEAIHVPIDKLEFVLGSDFQLSPKYTMDLFRLSSVVTEHDAKKAGAEVVKQVDNAP 176

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           LS     Y ++QA D   L    D   Q GG DQ       ++   R+   +   L SP+
Sbjct: 177 LS--GLIYPLMQALDEEHL----DVDAQFGGVDQRKIFTLALETLPRIGYKERAHLMSPM 230

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +   +G KM  + S        + +P    +  R 
Sbjct: 231 VPGLAGGKM--SASDPDSKIDILDTPETVKKKLRK 263


>gi|308471672|ref|XP_003098066.1| CRE-WARS-1 protein [Caenorhabditis remanei]
 gi|308269407|gb|EFP13360.1| CRE-WARS-1 protein [Caenorhabditis remanei]
          Length = 420

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 70/259 (27%), Gaps = 24/259 (9%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG      +    LD+         Y G   ++ SLH GHL   M   WLQ+    P
Sbjct: 79  MLRRGMFFAHRDFVAILDLKEQGKPFYLYTGRGASSGSLHLGHLVPFMFTKWLQEVFDVP 138

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK----YGTGKTDALML 126
           + +                +         +  +E  K +    +K     G   T   + 
Sbjct: 139 LVI--------------QMTDDEKFLWNEKMKVEDAKKMARQNMKDIISVGFDPTKTFIF 184

Query: 127 NNETWLCSIKYID----LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           N+  ++C   Y +          +        + E    +       +   F       +
Sbjct: 185 NDFDYMCPPFYENIVKIWKVVNANQARAIFGFTPEDCMGKAAFPAVEAAPCFASSFPHIF 244

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
                  +  C +     DQ        D+  RLK  K   + S  L    G +   + S
Sbjct: 245 GEKGKKNDIPCLIPC-AIDQDPYFRMCRDVAPRLKAAKPSLIFSSFLPALQGAQTKMSAS 303

Query: 243 GAIWLNKEMTSPYNFWQYW 261
                     +P       
Sbjct: 304 EPNTCIFLNDTPNQIKNKI 322


>gi|41615178|ref|NP_963676.1| tyrosyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|74579724|sp|Q74MD3|SYY_NANEQ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|40068902|gb|AAR39237.1| NEQ389 [Nanoarchaeum equitans Kin4-M]
          Length = 376

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 88/244 (36%), Gaps = 21/244 (8%)

Query: 11  ILSER-GFIHQISNPR-----ELDILCSQG-VVTAYIGYDLTASSLHAGH-LTQLMLLFW 62
            + ER   I Q           L     QG  +  YIG++++   +H G  +  ++ +  
Sbjct: 2   DIEERINLIAQKPTEEILTIDRLKQYLEQGIDLNHYIGFEISG-FVHLGTGIISMLKVRD 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            QK   K    +    S I      D     +R        E +K    +    G    +
Sbjct: 61  FQKAKVKTTLFLADYHSWINKKLGGDLE--TIRKVAKGYFAEALKVSLKTV---GGDPDE 115

Query: 123 ALMLNNETWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ++          I+Y++ + +I    ++NR+    ++  R K+ +S+SF +  Y+ +Q
Sbjct: 116 VKVVLGSELYEKLGIEYLENIIKISMNTTLNRIKKGITIMGR-KQGESISFAQLLYVPMQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D   L    +  L  GG DQ    +  I++ +      +      LL       + + 
Sbjct: 175 VADIYSL----NVNLAHGGIDQRKAHVIAIEVSDAFGYKPIAVHHHLLLGMHIDENIRQK 230

Query: 241 LSGA 244
           L  A
Sbjct: 231 LLEA 234


>gi|296413419|ref|XP_002836411.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630229|emb|CAZ80602.1| unnamed protein product [Tuber melanosporum]
          Length = 444

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 83/253 (32%), Gaps = 24/253 (9%)

Query: 11  ILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
               RG      +  R LD+         Y G   ++ S+H GH+   M   WLQ+T   
Sbjct: 80  QFLRRGMFFSHRDFERILDLYEQGKQFYIYTGRGPSSESMHLGHMIPFMFTKWLQETFDV 139

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNN 128
           P+ +M             D+ + + +     EN++   +      I  G       + ++
Sbjct: 140 PLCIM-----------LTDDEKFLFKQNLTIENVKGFARKNAKDIIAMGFDVNKTFIFSD 188

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             ++    Y ++L+ +    + N+  +           + L F         +  F  + 
Sbjct: 189 LDYMGGAFYENILK-VARCITTNQSKATFGFNDSDNIGK-LHFTAVQASTAFSTTFPHIF 246

Query: 189 KNYDCRLQM------GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGK 239
            +   +++          DQ        D+  RLK  K   + A   P L  +       
Sbjct: 247 GDDPIKVRQIPSLIPCAIDQDPYFRLTRDVAGRLKYQKPALIHAKFFPALGGSGSKMSAS 306

Query: 240 TLSGAIWLNKEMT 252
             + AI+++    
Sbjct: 307 IDTSAIFMSDTPN 319


>gi|324507967|gb|ADY43370.1| Tryptophanyl-tRNA synthetase [Ascaris suum]
          Length = 422

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 75/251 (29%), Gaps = 12/251 (4%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG      +    LD +  +     Y G   ++ SLH GHL   +   +LQ     P
Sbjct: 85  MLRRGLFFAHRDFSRILDRVEQKKPFFLYTGRGPSSGSLHLGHLVPFLFTKFLQDAFDVP 144

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       I D     + + + ++  + E  +         I  G       M  N  
Sbjct: 145 LII------QITD-----DEKFLWKNMTLDEARKMAHENMKDIIACGFSPETTFMFTNTQ 193

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           ++C   + ++L+      +      F         + +   LE       ++  V   K 
Sbjct: 194 YMCPPFFENVLKIWKLVTNNQARAIFGFTGDDSMGKAAFPALEAAPCFSSSFPHVFGGKK 253

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               +     DQ        D+  RLK PK   L S  L    G +     S        
Sbjct: 254 DIPCIIPAAIDQDPYFRMSRDVAPRLKYPKPAMLYSSFLPALQGARTKMAASDTTSCIYM 313

Query: 251 MTSPYNFWQYW 261
             +P       
Sbjct: 314 NDTPKQIKNKI 324


>gi|83772447|dbj|BAE62576.1| unnamed protein product [Aspergillus oryzae]
          Length = 417

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 74/227 (32%), Gaps = 15/227 (6%)

Query: 18  IHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +I NP  ++ +   +     Y G   T    H G+    + +  L +     + L+  
Sbjct: 52  LAEILNPEIIENILIEKRNPRIYWGTATTGRP-HIGYFLAALKIAQLLRAQCDVVVLLAD 110

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + +       ++ +              K I +     G        +   ++  S +
Sbjct: 111 VHAFL-------DNLKAPLELVENRAQYYRKIITAILESVGVPTDKLEFVLGSSYQKSPE 163

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           Y+  +  + S  S        +   +      LS     Y +LQ  D   L       +Q
Sbjct: 164 YVMDVYRLSSLISEGDAKKAGAEVVKQTENAPLS--GLLYPVLQVLDEEHLK----VDVQ 217

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +GG DQ        +   ++   K   L +P+++   G KM  ++  
Sbjct: 218 LGGMDQRKLFTAATEWLPKIGYRKRAHLINPMISGLKGAKMSSSVED 264


>gi|326334110|ref|ZP_08200337.1| tryptophan--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948086|gb|EGD40199.1| tryptophan--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 345

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 84/250 (33%), Gaps = 37/250 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   TA S H G+      +     LQ+  H+P   +    +             +   Q
Sbjct: 16  GIQPTADSYHLGNYLG--AVRQWVSLQEE-HEPFFFIADLHA-------------ITVEQ 59

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           + +   E+ +   +  +  G     + +          +   +++ I SF    RM  F+
Sbjct: 60  DPKVLRERTRRAAAQLLAAGVDPERSAIFVQSHLPEHAQLGWVMQCITSFGEARRMTQFK 119

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +S    E + S   F+Y +L A D + L +     +   G DQ  ++    DL +R  
Sbjct: 120 D-KSAKGGEGAASVGLFSYPMLMAADIL-LYRPAYVPV---GEDQRQHLELTRDLAQRFN 174

Query: 218 --TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN--I 264
               K F L  P +               KM K+ S    L   +  P    +  R+   
Sbjct: 175 SRYKKTFRLPEPYILKEVAKIYDLQDPSIKMSKSASSPSGLIDMLDDPKVSAKKIRSAVT 234

Query: 265 DDADVVSFAK 274
           D    + F +
Sbjct: 235 DSEMEIRFDE 244


>gi|169853411|ref|XP_001833385.1| tryptophanyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116505424|gb|EAU88319.1| tryptophanyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 435

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 67/201 (33%), Gaps = 29/201 (14%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +   RG         + LD          Y G   ++ S+H GH+   +   WLQ     
Sbjct: 84  VFLRRGMFFSHREFDKILDRYEQGKPFFLYTGRGPSSDSMHLGHMVPFVFAKWLQDVFEV 143

Query: 70  PISLMGGGTSIIGD---PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           P+ +       + D     F+ E +     Q  ++N +         I  G       + 
Sbjct: 144 PLVI------QLTDDEKFLFKHELKPEQTKQFSRQNAKD-------IIACGFNLERTFIF 190

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  ++    Y ++         ++R +++  VR+      S +  + ++  +Q      
Sbjct: 191 SNYEFMGGPFYENVS-------RISRQITYNQVRATFGFNDSDNIGKIHFASIQ-----A 238

Query: 187 LAKNYDCRLQMGGSDQWGNII 207
                +   Q+ G+D     +
Sbjct: 239 APSFSNTFPQIFGTDSKVPCL 259


>gi|198426145|ref|XP_002129278.1| PREDICTED: similar to Tyrosyl-tRNA synthetase, cytoplasmic
           (Tyrosyl--tRNA ligase) (TyrRS) [Ciona intestinalis]
          Length = 608

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 69/234 (29%), Gaps = 19/234 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    ++  +     +  Y G   T    H  +   +  +    K G +  
Sbjct: 88  LITRNL-QEVLGEDKMTEILQTRDLKVYWGTATTGKP-HVAYFVPMSKIGDFLKAGCEVT 145

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L+    + +                 +    +  + +  + ++  G        +    
Sbjct: 146 ILLADLHAYL--------DNMKAPWDLLVLRSKYYEHVIKAMLRSIGVPLEKLKFVQGTD 197

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 198 YQLSREYTLDVYRLSSVVTEHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 253

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                 Q GG DQ             L   K   L +P++   +GTKM  ++  
Sbjct: 254 ---VDAQFGGVDQRKIFTFAEKAMPALGYTKRIHLMNPMVPGLTGTKMSSSVEE 304


>gi|154297330|ref|XP_001549092.1| hypothetical protein BC1G_12069 [Botryotinia fuckeliana B05.10]
 gi|150858574|gb|EDN33766.1| hypothetical protein BC1G_12069 [Botryotinia fuckeliana B05.10]
          Length = 415

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 72/254 (28%), Gaps = 18/254 (7%)

Query: 18  IHQISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ +   +D   L  +  +  Y G   T    H G+   ++ +  L + G     L+ 
Sbjct: 18  LAEVLDGDIIDNVILKEKRPLKVYWGTATTGRP-HCGYFVPMIKIAELLRAGCNVKVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
                + D    +    +   +   +  E++       +     + + ++ ++       
Sbjct: 77  DIHGYL-D----NMKAPLELVEYRAKYYERVIKSALRAVGVDLSRLEFVLGSSYQLDKEY 131

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                  E  +  +V +    E V+               Y ++QA D   L    D   
Sbjct: 132 TMDRFKLEGITRINVAQKAGAEVVKQTDDPTLG----GLIYPLMQALDEQYL----DVDA 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS--GTKMGKTLSGAIWLNKEMTS 253
           Q GG DQ        +   ++       L + ++                 I L     +
Sbjct: 184 QFGGVDQRKIFTFAKENLPKINYKVRAHLMNTMVPGLGEAAKMSSSDADSKIDLIDGPEA 243

Query: 254 PYNFWQYWRNIDDA 267
                +  +     
Sbjct: 244 VEKKLKKAKCTPKE 257


>gi|73949939|ref|XP_535324.2| PREDICTED: similar to Tyrosyl-tRNA synthetase, cytoplasmic
           (Tyrosyl--tRNA ligase) (TyrRS) isoform 1 [Canis
           familiaris]
          Length = 511

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 16/220 (7%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            ++    +L  +  +  +  Y G   T    H  +   +  +    K G +   L     
Sbjct: 2   QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADLH 60

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + + D + +     +       EN+ K     +     G        +    +  S +Y 
Sbjct: 61  AYL-D-NMKAPWELLELRTSYYENVIK-----AMLESIGVPLEKLKFIKGTDYQLSKEYT 113

Query: 139 DLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             +  + S  + +        V  +++           Y  LQA D   L        Q 
Sbjct: 114 LDVYRLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK----VDAQF 166

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           GG DQ             L   K   L +P++   +G+KM
Sbjct: 167 GGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 206


>gi|319638314|ref|ZP_07993077.1| tryptophanyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400587|gb|EFV81245.1| tryptophanyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 336

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 85/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAIRAAQDANTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              +        ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLNPEQTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANTENGQEDPDH 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    ++Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLYSYPILMTADILMF----NAHEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLGAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  ++   +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTAKPSQIEDIL-QAGAQKARKEARELL 323


>gi|72391382|ref|XP_845985.1| tyrosyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62175920|gb|AAX70044.1| tyrosyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70802521|gb|AAZ12426.1| tyrosyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 697

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/344 (11%), Positives = 104/344 (30%), Gaps = 27/344 (7%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  +  +   +  Y G++ +   +H   G    + +     ++G + +
Sbjct: 19  RSVGEECIQENELRAMLEKKPDIRCYDGFEPSGR-MHVAQGVFKSINVNK-CTQSGCEFV 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    +++ D    +  R        +   E  K    +  +     +   + NN   
Sbjct: 77  FWVADWFALMNDKVGGELQRI---RIVGEYLTEVWKAANMNMERVRFLWSSDEITNNA-- 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                Y  L+ +I    ++ R+   +      K+E +L+  +  Y ++Q  D   L    
Sbjct: 132 ---NTYWKLVLDISRRNTIARI--KKCCTIMGKQEGTLTAAQVLYPLMQCADIFFLK--- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
              +   G DQ    +   +  + +    K   L+  +L          + S        
Sbjct: 184 -ADICQLGLDQRKVNMLAREYCDLIGRKNKPVILSHHMLAGLKQGHAKMSKSDPDSAIFM 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S  +  +  R         +  R+        D  A +  ++ N         + +  
Sbjct: 243 EDSEEDVARKIRAA-------YCPRVAQKSTEVTDDGAPVASEDKNPVLDYFECLVFSKP 295

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
                 + A        + +    ++   ++ +  +    G+L 
Sbjct: 296 GATAVVDGAEYNTYADLEKAFVDGNISEEALKEGLIELLNGILE 339


>gi|261329487|emb|CBH12469.1| tyrosyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 697

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/344 (11%), Positives = 104/344 (30%), Gaps = 27/344 (7%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  +  +   +  Y G++ +   +H   G    + +     ++G + +
Sbjct: 19  RSVGEECIQENELRAMLEKKPDIRCYDGFEPSGR-MHVAQGVFKSINVNK-CTQSGCEFV 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    +++ D    +  R        +   E  K    +  +     +   + NN   
Sbjct: 77  FWVADWFALMNDKVGGELQRI---RIVGEYLTEVWKAANMNMERVRFLWSSDEITNNA-- 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                Y  L+ +I    ++ R+   +      K+E +L+  +  Y ++Q  D   L    
Sbjct: 132 ---NTYWKLVLDISRRNTIARI--KKCCTIMGKQEGTLTAAQVLYPLMQCADIFFLK--- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
              +   G DQ    +   +  + +    K   L+  +L          + S        
Sbjct: 184 -ADICQLGLDQRKVNMLAREYCDLIGRKNKPVILSHHMLAGLKQGHAKMSKSDPDSAIFM 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             S  +  +  R         +  R+        D  A +  ++ N         + +  
Sbjct: 243 EDSEEDVARKIRAA-------YCPRVAQKSTEVTDDGAPVASEDKNPVLDYFECLVFSKP 295

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
                 + A        + +    ++   ++ +  +    G+L 
Sbjct: 296 GATAVVDGAEYNTYADLEKAFVEGNISEEALKEGLIELLNGILE 339


>gi|114800520|ref|YP_759250.1| tryptophanyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114740694|gb|ABI78819.1| tryptophanyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 344

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 70/210 (33%), Gaps = 25/210 (11%)

Query: 34  GVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
           G    + G   T  +LH G+    L     LQ+ GH  I  +    +             
Sbjct: 10  GPQRVFSGVQPTG-NLHLGNYLGALKKFADLQRDGHDCIFAVVDLHA------------- 55

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +    E    I   + I ++FI  G   + +++    + L  ++   +   +     V R
Sbjct: 56  ITMPMEKGALISHTRQIAAAFIAAGVDPSKSIIFAQSSVLAHVELAWIFNCVARMGWVER 115

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+      K  +  S   F Y +LQA D +   K     +   G DQ  ++    D+
Sbjct: 116 MTQFKD--KAGKDAERASVGLFTYPVLQAADILA-YKATHVPV---GEDQKQHLELSRDI 169

Query: 213 GERLKTP----KLFALTSPLLTTASGTKMG 238
            ER          F    P++       M 
Sbjct: 170 AERFNREYDVPGFFPQPEPMIKGPGARIMS 199


>gi|328859434|gb|EGG08543.1| hypothetical protein MELLADRAFT_34868 [Melampsora larici-populina
           98AG31]
          Length = 439

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 79/254 (31%), Gaps = 17/254 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R     + +   + +   +G  +T Y G   T    H G+   L  +    + G +
Sbjct: 21  ELITRNLGEVLGSQELMKLCEEEGRLITCYWGTATTGRP-HIGYFVPLAKIADFLRAGVR 79

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +       ++ +       Q        + + F   G        +   
Sbjct: 80  VKILLADVHAFL-------DNLKAPLELINQRVSYYSYILRAVFTSIGVPIDRLEFITGS 132

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  S  Y     ++ S  S        S   +      LS     Y +LQA D   L  
Sbjct: 133 SYQYSTPYNQDCLKLASLVSERDARKAGSEVVKESDTPPLS--GLLYPLLQALDEEYLK- 189

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                 Q GG DQ            +L   K   L + ++   +GTKM  + S +     
Sbjct: 190 ---VDFQFGGIDQRKIFTFAELYLPKLGYCKRIHLMNKMVPGLTGTKMSSSDSKSK--ID 244

Query: 250 EMTSPYNFWQYWRN 263
            + SP    +  ++
Sbjct: 245 FLDSPEEVKKKIKD 258


>gi|46110935|ref|XP_382525.1| hypothetical protein FG02349.1 [Gibberella zeae PH-1]
          Length = 365

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 86/261 (32%), Gaps = 25/261 (9%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++   IL+      +I +   L+    +  +  Y G   T    H G+L  ++ +  L
Sbjct: 10  IKANLAEILN-----SEIIDNVVLNE---KRPLEIYWGTATTGKP-HCGYLVPMVKIAEL 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTD 122
            + G +   L+     +             + +Q I    +  + +  S ++  G     
Sbjct: 61  LEAGCRVKILIADVHGLF--------DSVGVPAQLISHRCDYYQFVIKSLLRAIGVSTDR 112

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
              +   ++    +Y   +       + +     ++    +K++ +      NY I+Q  
Sbjct: 113 LEFVIGGSFQWDRQY--TMDRSQMGSTTSFSTERKACSEVVKQDDNPDVTSLNYPIMQVL 170

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D   L        ++GG DQ       ++   +L   K   L + L+      +   + S
Sbjct: 171 DEEYLK----VDAELGGVDQRKIFTFALENLPKLGYKKRAHLMNVLVPGLGQAQKMSS-S 225

Query: 243 GAIWLNKEMTSPYNFWQYWRN 263
                   + +P    +  R 
Sbjct: 226 DPNSKIGLLNTPEEVSKKIRK 246


>gi|73536482|ref|XP_847665.1| tryptophanyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|321438578|emb|CBZ12337.1| putative tryptophanyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 480

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 65/226 (28%), Gaps = 28/226 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ S+H GHL   M   WLQ T H P
Sbjct: 137 FLRRGIFFSHRDLNLILDAYEKGQPFYLYTGRGPSSESMHVGHLIPFMFTKWLQDTFHVP 196

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ +   +   ++E  +         I +G       +     
Sbjct: 197 LVI-----------QLTDDEKFFFKDLTMEEIDKMTTENLKDIIAFGFDPKLTFIF---- 241

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                 +  + +       + +  +   VR     +   +   + +  +QA      A  
Sbjct: 242 ----RDFEYVGQMYRIVARIEKAYTASQVRGCFGFKMEDNCGRWMFPAIQAAPSFSAAFP 297

Query: 191 YDCRLQMG--------GSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           +   LQ G          DQ        D+  R+   K   + S  
Sbjct: 298 HIFPLQKGNVFCMIPQAIDQDPYFRLTRDVAPRMGYLKPAVIHSKF 343


>gi|261377552|ref|ZP_05982125.1| tryptophan--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269146292|gb|EEZ72710.1| tryptophan--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 336

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 85/335 (25%), Gaps = 38/335 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +  ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENNQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSMPSETAAFTQMLAEGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
                +  S    +  ++ +AG A +  EAR  L 
Sbjct: 291 RERYNELTSNPSQIEDIL-QAGAAKARKEARELLN 324


>gi|241164560|ref|XP_002409503.1| tryptophanyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215494575|gb|EEC04216.1| tryptophanyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 431

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 73/237 (30%), Gaps = 26/237 (10%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
             L+I   +     Y G   ++ +LH GHL   +   WLQ T   P+ +           
Sbjct: 105 EILNIYEQKKPFYLYTGRGPSSDALHVGHLIPFIFTKWLQDTFDVPLVI----------- 153

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
              D+ + + +   ++E  +         +  G    +  +  +  +             
Sbjct: 154 QLTDDEKFLWKDMTVEEAEKMAHENIRDIVACGFDPANTFIFTDFKYTGQ-----CPEFY 208

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM------- 197
            +   + R ++F  V+       S    +  +  +QA      +  +    Q        
Sbjct: 209 KNIVRIRRSVTFNQVKGIFGFGDSDCIGKIGFPAVQAAPSFSSSFPFIFGEQSRVPCLIP 268

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            G DQ        D+  RL  PK     ++  P L  A         + +I+L    
Sbjct: 269 CGIDQDPYFRMTRDVAPRLGFPKPALLHSVFFPALQGAQSKMSASDPNSSIFLTDTP 325


>gi|170582075|ref|XP_001895965.1| tryptophanyl-tRNA synthetase [Brugia malayi]
 gi|158596909|gb|EDP35170.1| tryptophanyl-tRNA synthetase, putative [Brugia malayi]
          Length = 408

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 14/252 (5%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG      +    LD L  +     Y G   ++ SLH GHL   +   WLQ     P
Sbjct: 71  MLRRGLFFAHRDLSLILDRLEQKKPFFLYTGRGPSSGSLHLGHLIPFVFTKWLQDVFDVP 130

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D     + + + ++  + E            I  G       +  +  
Sbjct: 131 LII------QVTD-----DEKFLWKNHTLDEIKRMANENIKDIIACGFSPDKTFIFLDTE 179

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           ++C   Y ++L+      +VN+  S           ++            +   +   K 
Sbjct: 180 YMCPSFYTNILKIW-KLVTVNQARSIFGFTGEDSMGKAAFPSIEAAPCFSSSFPLIFGKR 238

Query: 191 YDC-RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            D   +     DQ        D+  RLK  K   + S  L    G +     S A     
Sbjct: 239 EDIPCIIPCAIDQDPYFRMCRDVAPRLKYLKPAMIYSSFLPALQGAQSKMAASDATTCIY 298

Query: 250 EMTSPYNFWQYW 261
              +P       
Sbjct: 299 LDDTPKQIKNKI 310


>gi|13097426|gb|AAH03450.1| Tryptophanyl-tRNA synthetase [Mus musculus]
 gi|71059845|emb|CAJ18466.1| Wars [Mus musculus]
          Length = 481

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIP 312

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 313 CAIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|323651388|gb|ADX97540.1| tyrosyl-tRNA synthetase [Terra1 virus]
          Length = 424

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 70/248 (28%), Gaps = 15/248 (6%)

Query: 19  HQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +      L  L       TAY G++ +   +H    L  +M    + + G   I  +  
Sbjct: 101 EECDTIDRLKELVESFKNFTAYNGFEPSGR-IHIAQALITVMNTNTIIQNGGSIIIYIAD 159

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + +      D          +++  +  K     F   G   +    +    +     
Sbjct: 160 WFAQMNHKMGGD----------LEKIRDVGKYFIEVFKACGINMSGTKFIWASEFFNDNA 209

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                R +      +   +    +    +    LS  +  Y  +Q  D  EL       +
Sbjct: 210 TKYFERMLHIANQTSLARAKRCCQIMGRREGDELSSSQIIYPCMQVADIFEL-NPNGIDI 268

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
              G DQ    +  I+  +R        L+  +L    G+K   + S          S  
Sbjct: 269 CQLGVDQRKVNMLAIEYAKRNNLKTPIILSHHMLMGLKGSKNKMSKSDPENAIFMEDSRE 328

Query: 256 NFWQYWRN 263
           + ++    
Sbjct: 329 DIFKKIYK 336


>gi|91093979|ref|XP_969006.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase, cytoplasmic
           (Tryptophan--tRNA ligase) (TrpRS) (Interferon-induced
           protein 53) (IFP53) (hWRS) [Tribolium castaneum]
 gi|270010919|gb|EFA07367.1| hypothetical protein TcasGA2_TC016342 [Tribolium castaneum]
          Length = 411

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 77/253 (30%), Gaps = 26/253 (10%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +     RG +    +    L +  S      Y G   +++S+H GHL   +   WLQ   
Sbjct: 70  VHHFLRRGIVFSHRDLHSILTLHESGKPFYLYTGRGPSSNSMHVGHLVPFIFCKWLQDIF 129

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           + P+ +              D+ + + +  +++E  +         I  G       M +
Sbjct: 130 NVPLVI-----------QLTDDEKFLWKDLKMEEVHKMTMENAKDIIAVGFDPEKTFMFS 178

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV-- 185
           +                 +   + R ++F  V+     + S    +  +  +QA   +  
Sbjct: 179 DL-----NYIGQCPEFYQNMVRIQRCVTFNQVKGIFGFDDSSVIGKVAFPAVQATPALST 233

Query: 186 ---ELAKNYDC-RLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMG 238
               + K      L     DQ        D+  R+   K     +   P L  A      
Sbjct: 234 SFPHIFKGKKVPCLIPCAIDQDPYFRMTRDVAPRIGFKKPALLHSTFFPALQGAQTKMSA 293

Query: 239 KTLSGAIWLNKEM 251
              +  I+L+   
Sbjct: 294 SDPNSTIYLSDTP 306


>gi|256818802|ref|NP_035840.3| tryptophanyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|51704226|sp|P32921|SYWC_MOUSE RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
          Length = 481

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIP 312

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 313 CAIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|281210530|gb|EFA84696.1| tryptophanyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 418

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 86/262 (32%), Gaps = 34/262 (12%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
             +RG      +    LD   S      Y G   ++ SLH GHL   +   +LQ   + P
Sbjct: 73  FLKRGIFFSHRDLVEILDAYESGKPFYLYTGRGPSSGSLHFGHLVPFIFTKYLQDVFNVP 132

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              ++ + + +   ++E+I+         I  G       + +N  
Sbjct: 133 LVI-----------QMTNDEKFLWKDITLEESIQFTINNVKDIIALGFDIEKTFIFSNLD 181

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV----- 185
           ++ ++     + +IG   ++N+      ++     + S S  +F +  +QA   +     
Sbjct: 182 YVGTMYPN--IVKIGKCITLNQ------IKGIFGFDDSNSCGKFAFPPVQAAPALPDSFP 233

Query: 186 ELAKNYDCRLQM------GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTK 236
            +    D   +          DQ        D+  R+   K   + +   P L   +   
Sbjct: 234 HIFSPSDPMTKSIRCLIPCAIDQDPYFRMTRDVAPRIGYLKPSLIHSKFFPALQGHNTKM 293

Query: 237 MGKTLSGAIWLNKEMTSPYNFW 258
                + AI+L+          
Sbjct: 294 SASDSNSAIYLSDTPKEVNEKI 315


>gi|50748700|ref|XP_421368.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 473

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + L    ++     Y G   ++ ++H GHL   +   WLQ+    P
Sbjct: 134 FLRRGIFFSHRDMDQILHAYENKKPFYLYTGRGPSSQAMHVGHLIPFLFTKWLQEAFDVP 193

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +    ++  E  K      I  G       + ++  
Sbjct: 194 LVI-----------QLTDDEKYLWKDMTTEKAYEYAKENARDIIACGFDVNKTFIFSDLD 242

Query: 131 WL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AY 182
           +L  S  +   + ++    + N+      V+       S    + ++  +Q       ++
Sbjct: 243 YLGSSTGFYKNIIKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSF 296

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGK 239
             +   K     L     DQ        D+  R+  PK     ++  P L  A       
Sbjct: 297 PQIFNGKENIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSVFFPALQGAQTKMSAS 356

Query: 240 TLSGAIWLNKEM 251
            ++ +++LN   
Sbjct: 357 DVNSSVFLNDTP 368


>gi|255956251|ref|XP_002568878.1| Pc21g18870 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590589|emb|CAP96784.1| Pc21g18870 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 394

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 66/219 (30%), Gaps = 14/219 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L        ++     DIL        Y G   T    H G+    + +  L       
Sbjct: 10  DLINSNLAEFLNPEIIQDILKEGRAPRIYWGTATTGRP-HIGYFVPALKIAQLLLADCDV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + D + +     +        N+             G        +   +
Sbjct: 69  VILLADVHAFL-D-NLKAPLELVENRAIYYRNVITAILQA-----VGVPTEKLTFVLGSS 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  S +Y+  + ++ S  S  +     +   +      LS     Y +LQ  D   L   
Sbjct: 122 YQKSPEYVFDVYKLSSLISEGQAKKAGAEVVKQTMNAPLS--GLLYPVLQVLDEQHL--- 176

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
            +C  Q+GG DQ        +   +L       L +P++
Sbjct: 177 -NCDAQLGGVDQRKLFTAATEWLPKLGYRVRAHLLNPMM 214


>gi|67483664|ref|XP_657052.1| tryptophanyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56474253|gb|EAL51632.1| tryptophanyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 385

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 87/306 (28%), Gaps = 21/306 (6%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD +     +  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 55  RGLFFCHRDINAVLDDVEKGNKIYLYTGRGPSSDALHLGHLIPFIFTKYLQDAFDCQLVV 114

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWL 132
                           +       +     +  K    +      +G           + 
Sbjct: 115 --------------QLTDDEKYLWKPVTIADTEKYAIENIKDIIASGLNPKKTFIFTDYT 160

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNY 191
              +   ++ +I S  + N++      +      + S   ++      +++  +   +  
Sbjct: 161 YMERMYPVVTKIQSRVTFNQVKGIFGFQPHHNLGKISFPAIQAAPAFPESFPHLFGKQKI 220

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT---SPLLTTASGTKMGKTLSGAIWLN 248
            C +     DQ        D  E L   K   +     P L  + G       + AI+L 
Sbjct: 221 RCLIPC-AIDQDPYFRMTRDHAESLGAYKPSLIMSKFFPALQGSMGKMSASDPNSAIYLI 279

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
                  +           D+  F K  T +      +  +    +  + +KI     + 
Sbjct: 280 DTPQQIADKINNHAYCSVQDIKEFKKNGTNVDDDVPYQYLRFFLNDDQQLEKIKNDYESA 339

Query: 309 MVHGRE 314
            +  ++
Sbjct: 340 QMMPQD 345


>gi|67466062|ref|XP_649189.1| tryptophanyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56465565|gb|EAL43803.1| tryptophanyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 385

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 87/306 (28%), Gaps = 21/306 (6%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD +     +  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 55  RGLFFCHRDINAVLDDVEKGNKIYLYTGRGPSSDALHLGHLIPFIFTKYLQDAFDCQLVV 114

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWL 132
                           +       +     +  K    +      +G           + 
Sbjct: 115 --------------QLTDDEKYLWKPVTIADTEKYAIENIKDIIASGLNPKKTFIFTDYT 160

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNY 191
              +   ++ +I S  + N++      +      + S   ++      +++  +   +  
Sbjct: 161 YMERMYPVVTKIQSRVTFNQVKGIFGFQPHDNLGKISFPAIQAAPAFPESFPHLFGKQKI 220

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT---SPLLTTASGTKMGKTLSGAIWLN 248
            C +     DQ        D  E L   K   +     P L  + G       + AI+L 
Sbjct: 221 RCLIPC-AIDQDPYFRMTRDHAESLGAYKPSLIMSKFFPALQGSMGKMSASDPNSAIYLI 279

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
                  +           D+  F K  T +      +  +    +  + +KI     + 
Sbjct: 280 DTPQQIADKINNHAYCSVQDIEEFKKNGTNVDDDVPYQYLRFFLNDDQQLEKIKNDYESA 339

Query: 309 MVHGRE 314
            +  ++
Sbjct: 340 QMMPQD 345


>gi|71019429|ref|XP_759945.1| hypothetical protein UM03798.1 [Ustilago maydis 521]
 gi|46099491|gb|EAK84724.1| hypothetical protein UM03798.1 [Ustilago maydis 521]
          Length = 440

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 77/251 (30%), Gaps = 26/251 (10%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG         + LD          Y G   ++ S+H GHL   +   WLQ     P
Sbjct: 77  LLRRGSFFSHRELDKILDRYEQGKPFFLYTGRGPSSDSMHLGHLIPFLFTKWLQDVFDCP 136

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE      + +I++  +         I  G       + +N  
Sbjct: 137 LVI------QLTD----DEKFLFKPALKIEQVKDFAFKNARDIIACGFKLDKTFIFSNLD 186

Query: 131 WLCSIKYIDLLREIGSFFSVNR------MLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++    Y +++  I    ++N+          +SV              F+    Q +  
Sbjct: 187 YVGGAFYANIV-RISRMITINQSKGTFGFTDSDSVGKAHFVSIQA-APSFSNSFPQIFGE 244

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTL 241
                     L     DQ        D+  RLK PK   + +   P L  +         
Sbjct: 245 KHDIP----CLIPCAIDQDPYFRQTRDVASRLKYPKPCLIHSKFFPALQGSQTKMSASNE 300

Query: 242 SGAIWLNKEMT 252
           + +I+++    
Sbjct: 301 NSSIFMHDTPN 311


>gi|326921026|ref|XP_003206765.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like
           [Meleagris gallopavo]
          Length = 473

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + L    ++     Y G   ++ ++H GHL   +   WLQ+    P
Sbjct: 134 FLRRGIFFSHRDMDQILHAYENKKPFYLYTGRGPSSQAMHVGHLIPFLFTKWLQEAFDVP 193

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +    ++  E  K      I  G       + ++  
Sbjct: 194 LVI-----------QLTDDEKYLWKDMTTEKAYEYAKENARDIIACGFDVNKTFIFSDLD 242

Query: 131 WL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AY 182
           +L  S  +   + ++    + N+      V+       S    + ++  +Q       ++
Sbjct: 243 YLGSSTGFYKNIIKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSF 296

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGK 239
             +   K     L     DQ        D+  R+  PK     ++  P L  A       
Sbjct: 297 PQIFNGKENIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSVFFPALQGAQTKMSAS 356

Query: 240 TLSGAIWLNKEM 251
            ++ +++LN   
Sbjct: 357 DVNSSVFLNDTP 368


>gi|322488781|emb|CBZ24028.1| putative tryptophanyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 396

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ S+H GHL   M   WLQ T H P
Sbjct: 53  FLRRGIFFSHRDLNLILDAYEKGQPFYLYTGRGPSSESMHVGHLIPFMFTKWLQDTFHVP 112

Query: 71  ISL 73
           + +
Sbjct: 113 LVI 115


>gi|29144895|gb|AAH46232.1| Wars protein [Mus musculus]
          Length = 475

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIP 312

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 313 CAIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|256818746|ref|NP_001157960.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|256818806|ref|NP_001157786.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|12835778|dbj|BAB23357.1| unnamed protein product [Mus musculus]
 gi|74225408|dbj|BAE31627.1| unnamed protein product [Mus musculus]
          Length = 475

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIP 312

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 313 CAIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|326933129|ref|XP_003212661.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic-like, partial
           [Meleagris gallopavo]
          Length = 507

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 66/221 (29%), Gaps = 16/221 (7%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
             +L  +  +  V  Y G   T    H  +   +  +    K G +   L     + + D
Sbjct: 4   EDKLMGILKEREVKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADLHAYL-D 61

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
            + +     +       EN+ K     +     G        +    +  S +Y   +  
Sbjct: 62  -NMKAPWELLELRTRYYENVIK-----AMLESIGVPLEKLKFVRGTDYQLSKEYTLDVYR 115

Query: 144 IGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           + S  + +        V  +++           Y  LQA D   L        Q GG DQ
Sbjct: 116 LSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK----VDAQFGGVDQ 168

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                        L   K   L +P++   +G+KM  +   
Sbjct: 169 RKIFTFAEKYLPSLGYAKRIHLMNPMVPGLTGSKMSSSEED 209


>gi|291237226|ref|XP_002738536.1| PREDICTED: tyrosyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 484

 Score = 54.8 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 63/234 (26%), Gaps = 18/234 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + + R L +L     +  Y G   T    H  +   +  +    +      
Sbjct: 14  LITRNLQEVLGDDRLLQMLKDGKDINIYWGTATTGKP-HVAYFVPMSKIADFLRADCHVT 72

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + +       ++ +                I       G        +    +
Sbjct: 73  ILFADLHAYL-------DNMKAPWELLALRTQYYEAAIKGMLESIGVPLEKLKFIRGTEF 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSF--ESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
             S +Y   +  + S  + +       E V+               Y  LQA D   L  
Sbjct: 126 ELSREYTLDVYRLTSLVTQHDAKKAGAEVVKQVDHP----LLSGLLYPGLQALDEEYLKV 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +     Q GG DQ            +L   K   L +P++   +G KM  +   
Sbjct: 182 DC----QFGGVDQRKIFTFAEKYLPQLGYKKRIHLMNPMVPGLTGAKMSSSEED 231


>gi|254466733|ref|ZP_05080144.1| RNA pseudouridine synthase family protein [Rhodobacterales
           bacterium Y4I]
 gi|206687641|gb|EDZ48123.1| RNA pseudouridine synthase family protein [Rhodobacterales
           bacterium Y4I]
          Length = 355

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I +     G  +  ++ +AG   S  EA R +    + +N   I +  L +  +D  S
Sbjct: 28  IPEGAAPEGDRIAKVLSRAG-VASRREAERMIAEGRVSVNGKKIDSPALNVTARDRIS 84


>gi|255327368|ref|ZP_05368442.1| tryptophan--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295648|gb|EET74991.1| tryptophan--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 354

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 97/271 (35%), Gaps = 37/271 (13%)

Query: 23  NPRELDILC----SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKT-GHKPISLMGG 76
           + ++ D       SQ     Y G   +A S+H G+    +     LQ    ++ +  +  
Sbjct: 3   DEKKQDKSLIPNASQQKARIYSGAQPSADSMHLGNYIGAVNNWVALQDDPNNECLFFIPD 62

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             +             +   Q  +E  E+ +   + +I  G   T   +          +
Sbjct: 63  MHA-------------ITVPQNPEELRERTRLTAAQYIASGIDPTRTPLFVQSHVPEHAQ 109

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
              +L     F   +RM  F+  +S+ +  ++ S   F Y IL A D + L +     + 
Sbjct: 110 LAWVLNCFTGFGEASRMTQFKD-KSQKQGAENASVGLFTYPILMAADIL-LYQVDGVPV- 166

Query: 197 MGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAI 245
             G DQ  ++    +L +R      + F +  P++   +           KM K+     
Sbjct: 167 --GEDQRQHLELTRNLAQRFNSRFGETFVVPEPVILKETAKIYDLQDPTSKMSKSAVSDK 224

Query: 246 WLNKEMTSPYNFWQYWRN--IDDADVVSFAK 274
            L K + +P    +  ++   DD  V+++ +
Sbjct: 225 GLIKLLDTPKTTQKKIKSAVTDDGSVIAYDR 255


>gi|253743903|gb|EET00185.1| Tyrosyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 386

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 92/258 (35%), Gaps = 25/258 (9%)

Query: 1   MPAFKS-DFLSILSERGFIHQISN----PRELDILC---SQGVVTAYIGYDLTASSLHA- 51
           M  F +   L+ + ++  + +I++    P EL  L        +T Y G++ +   +H  
Sbjct: 1   MTTFATLSPLTSMQKQHLLEKIADDILCPEELHALLHVDDSKRLTCYDGFEPSGR-IHIA 59

Query: 52  -GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR-RMMRSQEIQENIEKIKGI 109
            G + + + +  L ++G   +  +    + + +    + S+ + +    ++         
Sbjct: 60  QG-IVKAINVNRLLRSGIDCVFYVADWFAALNNKCGANISKIQTLGRYFVEVWKACGMLG 118

Query: 110 FSSFIKYGTGKTD-ALMLNNETWLCSIKYIDLLREIG--SFFSVNRMLSFESVRSRLKRE 166
            S  + + TG+T     +    ++        +R +     F+V R+    ++  R + +
Sbjct: 119 VSRPVVFNTGQTASVKFVWASEFIRQNSSSYWMRVMNIARSFTVPRLQRCSTIMGRTEGD 178

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER----LKTPKLF 222
                 +  Y  +Q  D  EL       L   G DQ        D  ++         + 
Sbjct: 179 DQP-ISQILYPSMQCADIFELK----LDLVEMGLDQRKVNALARDYCDKSAELKHHKPVI 233

Query: 223 ALTSPLLTTASGTKMGKT 240
            +   LL      KM K+
Sbjct: 234 LMHHMLLGLVGDGKMSKS 251


>gi|301764170|ref|XP_002917509.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like
           [Ailuropoda melanoleuca]
          Length = 476

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 152 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 201 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSPGFYKNVVKIQ 260

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYD--CRLQMG 198
              + N+      V+       S S  + ++  +Q     +  F ++ ++      L   
Sbjct: 261 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFRDRADIQCLIPC 314

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 315 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|156360855|ref|XP_001625239.1| predicted protein [Nematostella vectensis]
 gi|156212062|gb|EDO33139.1| predicted protein [Nematostella vectensis]
          Length = 399

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 79/262 (30%), Gaps = 31/262 (11%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG      +    LD+         Y G   ++ S+H GHL   +   +LQ+    P
Sbjct: 55  LLKRGVFFSHRDLDAMLDVYEKGKPFYLYTGRGPSSESMHLGHLIPFIFTKYLQEAFDVP 114

Query: 71  ISLMGGGTSIIGD---PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           + +       + D      +         +   EN           I  G       + +
Sbjct: 115 LVI------QLTDDEKFFLKKNLECQETHRLAYEN-------MKDIIACGFDPNKTFIFS 161

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AY 182
           +  ++             +   + + ++F  VRS     ++ +  +  +  +Q     + 
Sbjct: 162 DMDYIG-----SCPEFYTNIMKIQKCITFNQVRSTFGFTETDNIGKIAFPAIQAAPSFSN 216

Query: 183 DFVELA---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
            F  +    K+  C +     DQ        D+  R+  PK   + S       G K   
Sbjct: 217 SFPHIFGDKKDIPCFIPC-AIDQDPYFRLTRDVAPRIGCPKPSLIFSTFFPALQGAKTKM 275

Query: 240 TLSGAIWLNKEMTSPYNFWQYW 261
           + S          +P    +  
Sbjct: 276 SASDPTTSIFLSDTPNQIKKKI 297


>gi|74211911|dbj|BAE29299.1| unnamed protein product [Mus musculus]
          Length = 475

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + +   ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSVLEYMGQSPGFYRNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIP 312

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 313 CAIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|309356566|emb|CAP36935.2| hypothetical protein CBG_19783 [Caenorhabditis briggsae AF16]
          Length = 1232

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 70/237 (29%), Gaps = 19/237 (8%)

Query: 10  SILSERGFIHQI-SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             L  R     +  +   L +     V   Y G   T    H G+L  +  +    + G 
Sbjct: 536 RELILRNLQESLGVDKLTLQLGTPGKVPHVYWGTATTGKP-HVGYLVPMRKIADFLQAGL 594

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K   L     + + D + +     +             K I +                 
Sbjct: 595 KVTILFADLHAYL-D-NMKSTWDVLKSRVVY-----YQKVIIALLESLDVPIGQLHFKKG 647

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             +     Y D + ++ +  S+   L    E V+       S         + + Y  V 
Sbjct: 648 TEYQLERDYTDHVLQLTAQVSLRDALKAGAEVVKQVESPLLSGLLYPLLQALDEQYLKV- 706

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                    Q GG DQ    I   +   +LK  K + L +P++   +GTKM  +   
Sbjct: 707 -------DGQFGGVDQRKIFILAEEQLPKLKLGKRWHLMNPMVPGLTGTKMSSSEED 756


>gi|255066807|ref|ZP_05318662.1| tryptophan--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255048882|gb|EET44346.1| tryptophan--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 336

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 84/336 (25%), Gaps = 38/336 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +  ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENNQEDPDH 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    ++Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLYSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEVFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
                +  +    +  ++ + G A +  EAR  L  
Sbjct: 291 RERYNELTANPSQIEDIL-QTGAAKARKEARELLDQ 325


>gi|146092762|ref|XP_001466512.1| tryptophanyl-tRNA synthetase [Leishmania infantum]
 gi|134070875|emb|CAM69551.1| putative tryptophanyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 396

 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ S+H GHL   M   WLQ T H P
Sbjct: 53  FLRRGIFFSHRDLNLILDAYEKGQPFYLYTGRGPSSESMHVGHLIPFMFTKWLQDTFHVP 112

Query: 71  ISL 73
           + +
Sbjct: 113 LVI 115


>gi|322500654|emb|CBZ35731.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 396

 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ S+H GHL   M   WLQ T H P
Sbjct: 53  FLRRGIFFSHRDLNLILDAYEKGQPFYLYTGRGPSSESMHVGHLIPFMFTKWLQDTFHVP 112

Query: 71  ISL 73
           + +
Sbjct: 113 LVI 115


>gi|194686589|ref|XP_001256627.2| PREDICTED: Tryptophanyl-tRNA synthetase, cytoplasmic-like [Bos
           taurus]
          Length = 461

 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 82/256 (32%), Gaps = 41/256 (16%)

Query: 12  LSERGFI------HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              RG        HQI     LD   ++     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 121 FLRRGIFFSHRDMHQI-----LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQD 175

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             + P+ +              D+ + + +   + +            I  G       +
Sbjct: 176 VFNVPLVI-----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFI 224

Query: 126 LNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ---- 180
            ++  ++  S  +   + +I    + N+      V+       S    + ++  +Q    
Sbjct: 225 FSDLDYMGMSPGFYKNVVKIQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPS 278

Query: 181 -AYDFVELAKNYDCRLQM---GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTAS 233
            +  F ++ ++    +Q       DQ        D+  R+  PK     +   P L  A 
Sbjct: 279 FSNSFPQIFRDR-TDVQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ 337

Query: 234 GTKMGKTLSGAIWLNK 249
                   + +I+L  
Sbjct: 338 TKMSASDPNSSIFLTD 353


>gi|283458669|ref|YP_003363304.1| tryptophanyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134719|dbj|BAI65484.1| tryptophanyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 371

 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 98/271 (36%), Gaps = 37/271 (13%)

Query: 23  NPRELDILC----SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKT-GHKPISLMGG 76
           + ++ D       SQ     Y G   +A S+H G+    +     LQ    ++ +  +  
Sbjct: 20  DEKKQDKSLIPNASQQKARIYSGAQPSADSMHLGNYIGAVNNWVALQDDPNNECLFFIPD 79

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             +             +   Q  +E  E+ +   + +I  G   T   +          +
Sbjct: 80  MHA-------------ITVPQNPEELRERTRLTAAQYIASGIDPTRTPLFVQSHVPEHAQ 126

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
              +L     F   +RM  F+  +S+ +  ++ S   F Y IL A D + L +     + 
Sbjct: 127 LAWVLNCFTGFGEASRMTQFKD-KSQKQGAENASVGLFTYPILMAADIL-LYQVDGVPV- 183

Query: 197 MGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAI 245
             G DQ  ++    +L +R      + F +  P++   +           KM K+ +   
Sbjct: 184 --GEDQRQHLELTRNLAQRFNSRFGETFVVPEPVILKETAKIYDLQDPTSKMSKSAATDK 241

Query: 246 WLNKEMTSPYNFWQYWRN--IDDADVVSFAK 274
            L K + +P    +  ++   DD  V+++ +
Sbjct: 242 GLIKLLDTPKATQKKIKSAVTDDGSVIAYDR 272


>gi|66825257|ref|XP_645983.1| tryptophanyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74858824|sp|Q55DZ8|SYWC_DICDI RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|60474140|gb|EAL72077.1| tryptophanyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 400

 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 87/264 (32%), Gaps = 34/264 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      + +E LD   S      Y G   ++ SLH GHL       +LQ   + P
Sbjct: 62  FLRRGIFFSHRDLKEILDHHESGKKWFLYTGRGPSSGSLHFGHLLPFTFTKYLQDAFNVP 121

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              ++ + + +   ++E+I+         I  G       + +N  
Sbjct: 122 LVV-----------QMTNDEKFLWKDMTLEESIKFTHNNVKDIIALGFDIQKTFIFSNLE 170

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFV 185
           ++  +          +   + R ++   +++    ++S +  +F +  +QA       F 
Sbjct: 171 YIHHLYP--------NVLKIARCVNLNQIQNIFGFKESDAIGKFTFPPVQAAPCFPDSFP 222

Query: 186 ELAKNYDCRLQM------GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTK 236
            +    D  ++          DQ        D+  R+   K   + +   P L   +   
Sbjct: 223 HIFPLNDPEIKNIRCLIPCAIDQDPYFRMTRDIAHRIGHQKPALIHSKFFPALQGHNTKM 282

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQY 260
                + A++L+       +  + 
Sbjct: 283 SASDTNSAVYLSDTPDQVKDKIKK 306


>gi|134106229|ref|XP_778125.1| hypothetical protein CNBA1270 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260828|gb|EAL23478.1| hypothetical protein CNBA1270 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 819

 Score = 54.4 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 69/232 (29%), Gaps = 19/232 (8%)

Query: 13  SERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
             R    ++++   +  + S+G V  AY G   T    H  +   L+ +      G    
Sbjct: 22  ITRNL-QEVTSGDVIRKVLSEGKVVKAYWGTAPTGRP-HIAYCVPLLKIADFLTAGVNVK 79

Query: 72  SLMGG---GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L+ G     + + D S         R +   + +  +  +           T +     
Sbjct: 80  VLLAGELILHAFL-DASKSTLETVQYRVKYYSKLLITVFTVLGVPTDKLEFITGSSYQLK 138

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +   +     L            +  ES        +S       Y  LQA D   L 
Sbjct: 139 PDYTLDVYRFHALTSTREAEHAGADVVKES--------ESPLMSSLLYPGLQALDEQYL- 189

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
              D   Q GG DQ    +       +L   K   L + ++   SG KM  +
Sbjct: 190 ---DVDFQFGGVDQRKIFMYAATFLPKLGYSKRAHLMNAMVPGLSGGKMSAS 238


>gi|281338622|gb|EFB14206.1| hypothetical protein PANDA_005823 [Ailuropoda melanoleuca]
          Length = 439

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 115 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 163

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 164 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSPGFYKNVVKIQ 223

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYD--CRLQMG 198
              + N+      V+       S S  + ++  +Q     +  F ++ ++      L   
Sbjct: 224 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFRDRADIQCLIPC 277

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 278 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 331


>gi|311261579|ref|XP_003128776.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like [Sus
           scrofa]
          Length = 482

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 152 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 201 TDDEKYLWKELTLEQAHGYAVENAKDIIACGFDVNKTFIFSDLDYMGMSPGFYKNVVKIQ 260

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S    + ++  +QA                 +Q     
Sbjct: 261 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPQIFRDRTDIQCLIPC 314

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 315 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|255514025|gb|EET90289.1| tyrosyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 379

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 71/214 (33%), Gaps = 15/214 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM-LLFWLQKTGHK 69
           L +R    +I     L    + G  +  YIG++++   +H G     M  +  LQ+ G K
Sbjct: 9   LIKRSPTEEILTEDRLAEALNSGQHLRHYIGFEISG-FVHLGTGPLSMGKIADLQEAGIK 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    + I      D     ++        E +K    S    G        +   
Sbjct: 68  TSVFLADYHTWINKKLGGDM--DTIKRIANNYFKESLKVSIRSA---GGDPEKTEFILGS 122

Query: 130 TWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
                    Y + + ++ S  S++R     +V  R + +  +S  +  Y+ +QA D    
Sbjct: 123 ELYEKLGRDYFENVLKVSSTMSLSRARRSTTVLGRKEGDD-ISLSQLIYVPMQAADIY-- 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             +    +   G DQ    +  ++         +
Sbjct: 180 --SMKVNIAHAGMDQRKAHVVALESSGAFSYKPI 211


>gi|281207412|gb|EFA81595.1| tyrosine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 388

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 23/242 (9%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +I +   L+ L + +  +  Y G++ +   +H   G L  + +   + K G   +  + 
Sbjct: 54  EEIISEENLEKLLTAKERLICYDGFEPSGR-MHIAQGILKSINV-NRMTKAGCTFVFWVA 111

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNETWLCS 134
              +++ +    D        +  Q  IE  K              +D +  N   +   
Sbjct: 112 DWFAMLNNKMGGD---LNKIRKVGQYLIEIWKATGMDMENVKFLWSSDEINKNANDYWLK 168

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  I     I       +++           E  LS  +  Y  +Q  D   L       
Sbjct: 169 VMDISRKFNIPRIKRCAQIMGRND-------EDDLSVAQVLYPCMQCADIFYLK----AD 217

Query: 195 LQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASGTKMGKTLSGAIWLNKEM 251
           +   G DQ    +  ++  ++LK   K   ++  +L        KM K+   +    ++ 
Sbjct: 218 ICQLGMDQRKVNMLALEYCDKLKMKHKPVIVSHHMLMGLKEGQEKMSKSDPESAIFMEDT 277

Query: 252 TS 253
            S
Sbjct: 278 ES 279


>gi|323651390|gb|ADX97541.1| tyrosyl-tRNA synthetase [Moumou virus]
          Length = 345

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 20/309 (6%)

Query: 19  HQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +   P  L+ L  S    TAY G++ +   +H    L  +M    +   G + I  +  
Sbjct: 20  EECETPDRLEELIKSGKKFTAYNGFEPSGR-IHIAQALITVMNTNEIISCGGRMIIYIAD 78

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + +                ++ +  +        F   G   ++   + +        
Sbjct: 79  LFAKMN----------KKMDSDLDKIKDVGLYFIEVFKACGINMSETKFIWSSDLFNKNP 128

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                R +      +   S    +    K    LS  +  Y  +Q  D  EL +     +
Sbjct: 129 EKYFTRLLDISEETSLSRSKRCCQIMGRKDGDELSVSQIIYPCMQVADIFEL-EPEGIDI 187

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA---IWLNKEMT 252
              G DQ    +  ++  ++        L+  +L    G K   + S     I++     
Sbjct: 188 CQLGVDQRKVNMLALEYAKKNGLKVPVILSHHMLMGLGGPKNKMSKSDPKSAIFMEDSYE 247

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
                       DD +     + +  +      ++        N     I  +   M   
Sbjct: 248 EIKEKILRAFCTDDINENPIFEYIKHILFRWYGKLELCGKNYDNM--SDIEKDFCDMNKR 305

Query: 313 REEAEKAAT 321
             +   A  
Sbjct: 306 ELKNNVAEY 314


>gi|237805279|ref|ZP_04591983.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331026387|gb|EGI06442.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 70

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           +  M +  ++ KAG   +   AR  L S  ++I+  ++ +         F          
Sbjct: 4   AEDMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV-DRSFV-----FKLGATHVCQA 57

Query: 407 GKKNHIICHLC 417
           GKK      L 
Sbjct: 58  GKKAFGRVTLV 68


>gi|268570200|ref|XP_002640716.1| Hypothetical protein CBG19783 [Caenorhabditis briggsae]
          Length = 497

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 70/237 (29%), Gaps = 19/237 (8%)

Query: 10  SILSERGFIHQI-SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             L  R     +  +   L +     V   Y G   T    H G+L  +  +    + G 
Sbjct: 12  RELILRNLQESLGVDKLTLQLGTPGKVPHVYWGTATTGKP-HVGYLVPMRKIADFLQAGL 70

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K   L     + + D + +     +             K I +                 
Sbjct: 71  KVTILFADLHAYL-D-NMKSTWDVLKSRVVY-----YQKVIIALLESLDVPIGQLHFKKG 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             +     Y D + ++ +  S+   L    E V+       S         + + Y  V 
Sbjct: 124 TEYQLERDYTDHVLQLTAQVSLRDALKAGAEVVKQVESPLLSGLLYPLLQALDEQYLKV- 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                    Q GG DQ    I   +   +LK  K + L +P++   +GTKM  +   
Sbjct: 183 -------DGQFGGVDQRKIFILAEEQLPKLKLGKRWHLMNPMVPGLTGTKMSSSEED 232


>gi|307297961|ref|ZP_07577765.1| tryptophanyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916047|gb|EFN46430.1| tryptophanyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 327

 Score = 54.0 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 29/306 (9%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           LH G+   L     LQ  G++    +     +                 E     +    
Sbjct: 13  LHLGNFITLEKWKELQDQGNECFYFVANWHGL------------TSHIDETSSFYDWSLD 60

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
           I  +++  G     +++          +       + S   + R+ +++  + ++     
Sbjct: 61  IVRTYVSAGLDPEKSVLFIQSAIKEHAELFLYFSMLVSVSRLERVPTYKDQKEQITDRDL 120

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--------PK 220
            S     Y +LQA D + +       +   G DQ  ++    ++  +           P+
Sbjct: 121 SSGGFLLYPVLQAADIL-MYLATGVPV---GEDQIYHVELTREIARKFNNQFAEVFPEPE 176

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
                 P L    G KM K+    I ++           +          +  +R     
Sbjct: 177 PILAKVPKLPGTDGRKMSKSYGNYILIDT-----DEKELWKMIAPMMTDPARMRRTDRGD 231

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             +       +    ++ +K    E            K          +S   + +  + 
Sbjct: 232 PEKCPVWDYHKAFTTSDEEKRWVVEGCKTAGIGCIECKRLLHKNLVQRLSPVWEKLSHLK 291

Query: 341 ISKDEV 346
            + DE+
Sbjct: 292 ENSDEL 297


>gi|220702585|pdb|3FOC|A Chain A, Tryptophanyl-Trna Synthetase From Giardia Lamblia
 gi|220702586|pdb|3FOC|B Chain B, Tryptophanyl-Trna Synthetase From Giardia Lamblia
          Length = 451

 Score = 54.0 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 11/172 (6%)

Query: 12  LSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG  +   +    L        +  Y G   ++ +LH GHL   +   +LQ    K 
Sbjct: 67  MLRRGLFYAHRDFEEFLSYYEKGHPIYIYTGRGPSSGALHLGHLLPFIFTKYLQDA-FKC 125

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++      I D    DE     RS    E     +      I  G       +  N  
Sbjct: 126 YVVI-----QITD----DEKFLRNRSLSYAEVDSYTRENIKDIIACGFDPDKTFIFINSQ 176

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           +L           +     ++++ +     +      +    +    +   Y
Sbjct: 177 YLSLKNRYRFSCLVDRMLPISQLRASFGFSNDANVGYAAFPPKQMLPVYSTY 228


>gi|159116851|ref|XP_001708646.1| Tryptophanyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157436759|gb|EDO80972.1| Tryptophanyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 429

 Score = 54.0 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 11/172 (6%)

Query: 12  LSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG  +   +    L        +  Y G   ++ +LH GHL   +   +LQ    K 
Sbjct: 45  MLRRGLFYAHRDFEEFLSYYEKGHPIYIYTGRGPSSGALHLGHLLPFIFTKYLQDA-FKC 103

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++      I D    DE     RS    E     +      I  G       +  N  
Sbjct: 104 YVVI-----QITD----DEKFLRNRSLSYAEVDSYTRENIKDIIACGFDPDKTFIFINSQ 154

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           +L           +     ++++ +     +      +    +    +   Y
Sbjct: 155 YLSLKNRYRFSCLVDRMLPISQLRASFGFSNDANVGYAAFPPKQMLPVYSTY 206


>gi|206602359|gb|EDZ38840.1| Tryptophanyl-tRNA synthetase [Leptospirillum sp. Group II '5-way
           CG']
          Length = 355

 Score = 54.0 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 52/371 (14%), Positives = 112/371 (30%), Gaps = 45/371 (12%)

Query: 17  FIHQISNPRELDILCSQGVV---TAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPIS 72
              + S    ++    +  V       G   +   LH G+    +     LQ   ++   
Sbjct: 3   MEKETSPENPVENSTEEKNVPVRRIVSGIQPSGR-LHLGNYMGALKNWIDLQDR-YESFF 60

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            +    ++         +     +  I++NI   + +   ++  G       +      L
Sbjct: 61  FIADWHAL---------TTNYEDTSPIRQNI---REMLVDWLSLGLDPEKCTIFLQSDVL 108

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
              +   LL  +     + R  S++  ++++      +F    Y +L + D + L +   
Sbjct: 109 EHAELNLLLSMVTPVSWLERNPSYKDQQTQITGRDLSTFGFLGYPVLMSADIL-LYRADH 167

Query: 193 CRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLT------TASGTKMGKTLSGA 244
             +   G DQ  ++    ++  R       +     PLLT         G KM K+    
Sbjct: 168 VPV---GLDQLPHLELAREIARRLRHFYGPVVPEPLPLLTPTPRLLGLDGRKMSKSYKNC 224

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           I++       +   +     D A V               D     +    N  +    +
Sbjct: 225 IYVGDSSAEVWEKVRPMM-TDPARVRRS------------DPGDPDKCPVFNLHQSFSPS 271

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL-TLIVKAGFAT 363
           E    V              +   +    + +      + E+S   G L  ++ + G   
Sbjct: 272 ETVQEVDKGCRTAGIGCIDCKKLLVGHIERILQPAREKRQEISARKGFLKEVLREGGKTA 331

Query: 364 STNEARRHLKS 374
           S  EARR ++ 
Sbjct: 332 S-GEARRTIRE 341


>gi|110283011|sp|P17248|SYWC_BOVIN RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
 gi|74354933|gb|AAI02807.1| WARS protein [Bos taurus]
 gi|296475163|gb|DAA17278.1| tryptophanyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 476

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 82/256 (32%), Gaps = 41/256 (16%)

Query: 12  LSERGFI------HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              RG        HQI     LD   ++     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 136 FLRRGIFFSHRDMHQI-----LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQD 190

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             + P+ +              D+ + + +   + +            I  G       +
Sbjct: 191 VFNVPLVI-----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFI 239

Query: 126 LNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ---- 180
            ++  ++  S  +   + +I    + N+      V+       S    + ++  +Q    
Sbjct: 240 FSDLDYMGMSPGFYKNVVKIQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPS 293

Query: 181 -AYDFVELAKNYDCRLQM---GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTAS 233
            +  F ++ ++    +Q       DQ        D+  R+  PK     +   P L  A 
Sbjct: 294 FSNSFPQIFRDR-TDVQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ 352

Query: 234 GTKMGKTLSGAIWLNK 249
                   + +I+L  
Sbjct: 353 TKMSASDPNSSIFLTD 368


>gi|27806353|ref|NP_776643.1| tryptophanyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|825|emb|CAA37872.1| tryptophan-tRNA ligase [Bos taurus]
          Length = 475

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 80/256 (31%), Gaps = 42/256 (16%)

Query: 12  LSERGFI------HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              RG        HQI     LD   ++     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 136 FLRRGIFFSHRDMHQI-----LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQD 190

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             + P+ +               +  + +      +         +  I  G       +
Sbjct: 191 VFNVPLVI------------QMTDDEKYLWKDLTLDQAYGYAVENAKDITCGFDINKTFI 238

Query: 126 LNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ---- 180
            ++  ++  S  +   + +I    + N+      V+       S    + ++  +Q    
Sbjct: 239 FSDLDYMGMSPGFYKNVVKIQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPS 292

Query: 181 -AYDFVELAKNYDCRLQM---GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTAS 233
            +  F ++ ++    +Q       DQ        D+  R+  PK     +   P L  A 
Sbjct: 293 FSNSFPQIFRDR-TDVQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ 351

Query: 234 GTKMGKTLSGAIWLNK 249
                   + +I+L  
Sbjct: 352 TKMSASDPNSSIFLTD 367


>gi|19113895|ref|NP_592983.1| tryptophan-tRNA ligase Wrs1 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|1174553|sp|Q09692|SYWC_SCHPO RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|1052796|emb|CAA90500.1| tryptophan-tRNA ligase Wrs1 (predicted) [Schizosaccharomyces pombe]
          Length = 395

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    LD    +     Y G   ++ S+H GH+   M   WLQ     P
Sbjct: 58  LLRRGAFFSHRDFDMILDRYEQKKPFYLYTGRGPSSDSMHLGHMIPFMFCKWLQDVFQVP 117

Query: 71  ISL 73
           + +
Sbjct: 118 LVI 120


>gi|297282878|ref|XP_001104797.2| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic isoform 1 [Macaca
           mulatta]
          Length = 497

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 57/200 (28%), Gaps = 19/200 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEDKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNET 130
            L     + +               + ++  +   + +  + ++  G        +    
Sbjct: 71  ILFADLHAYL--------DNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  S +Y   +  + S  + +        V  +++           Y  LQA D   L  
Sbjct: 123 YQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK- 178

Query: 190 NYDCRLQMGGSDQWGNIICG 209
                 Q GG DQ       
Sbjct: 179 ---VDAQFGGVDQRKIFTFA 195


>gi|109084876|ref|XP_001105725.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 9
           [Macaca mulatta]
 gi|109084878|ref|XP_001105786.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 10
           [Macaca mulatta]
 gi|109084882|ref|XP_001105926.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 12
           [Macaca mulatta]
          Length = 475

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S S  + ++  +QA     +           +Q     
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFQDRTDIQCLIPC 313

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 314 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|837|emb|CAA36356.1| unnamed protein product [Bos taurus]
          Length = 459

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 80/256 (31%), Gaps = 42/256 (16%)

Query: 12  LSERGFI------HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              RG        HQI     LD   ++     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 120 FLRRGIFFSHRDMHQI-----LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQD 174

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             + P+ +               +  + +      +         +  I  G       +
Sbjct: 175 VFNVPLVI------------QMTDDEKYLWKDLTLDQAYGYAVENAKDITCGFDINKTFI 222

Query: 126 LNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ---- 180
            ++  ++  S  +   + +I    + N+      V+       S    + ++  +Q    
Sbjct: 223 FSDLDYMGMSPGFYKNVVKIQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPS 276

Query: 181 -AYDFVELAKNYDCRLQM---GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTAS 233
            +  F ++ ++    +Q       DQ        D+  R+  PK     +   P L  A 
Sbjct: 277 FSNSFPQIFRDR-TDVQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ 335

Query: 234 GTKMGKTLSGAIWLNK 249
                   + +I+L  
Sbjct: 336 TKMSASDPNSSIFLTD 351


>gi|90076298|dbj|BAE87829.1| unnamed protein product [Macaca fascicularis]
          Length = 475

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S S  + ++  +QA     +           +Q     
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFQDRTDIQCLIPC 313

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 314 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|163745924|ref|ZP_02153283.1| RNA pseudouridylate synthase family protein, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380669|gb|EDQ05079.1| RNA pseudouridylate synthase family protein, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 354

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  + +    S+G  +  ++ +AG   S  EA R +++  +++N   I +  L +  +D 
Sbjct: 12  PQNTDTDASTSKGDRIAKVLSRAG-VASRREAERMIEAGRVRVNGEQIDSPALNVTPEDK 70

Query: 397 D 397
            
Sbjct: 71  I 71


>gi|145520883|ref|XP_001446297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413774|emb|CAK78900.1| unnamed protein product [Paramecium tetraurelia]
          Length = 411

 Score = 53.6 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 67/244 (27%), Gaps = 26/244 (10%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL-MGGGTSIIGDPS 85
           LD   +      Y G   +  S+H GHL   +   +LQ+    P+ + +           
Sbjct: 86  LDAYEAGKGFYLYTGRGPSGDSMHVGHLMPFIFTKYLQEAFDVPVVIELSD--------- 136

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             DE         ++E            I  G       +  +                 
Sbjct: 137 --DEKFFHKSETTLEEYQRYGYENAKDIIACGFDVNKTFIFLSS--------QYAGHMYH 186

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE------LAKNYDCRLQMGG 199
           +       +++  +R      +S +  +  Y  +QA   +         K+    L   G
Sbjct: 187 NICKFQHAITYSQLRGIFGLNESDNCGKVAYPAVQAAPSLSSSFKHIFGKDEVMCLVPQG 246

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
            DQ        D+  +LK PK   + S  L    G       +          +P    +
Sbjct: 247 IDQDPYFRMTRDVCYKLKVPKTGCIHSQFLPGLHGFGTKMGTTDPTSAIFLTDTPKEIEE 306

Query: 260 YWRN 263
             + 
Sbjct: 307 KIKK 310


>gi|296215896|ref|XP_002754330.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like
           [Callithrix jacchus]
          Length = 474

 Score = 53.6 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 74/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 150 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 198

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 199 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSPGFYKNVVKIQ 258

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S S  + ++  +QA     +           +Q     
Sbjct: 259 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFGDRTDIQCLIPC 312

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  ++  PK     +   P L  A         + +I+L  
Sbjct: 313 AIDQDPYFRMTRDVAPKIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 366


>gi|261380960|ref|ZP_05985533.1| tryptophan--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796219|gb|EFC51566.1| tryptophan--tRNA ligase [Neisseria subflava NJ9703]
          Length = 336

 Score = 53.6 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 86/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q +  +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAIRAAQDSNTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              +        ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLNPEQTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANTENGQEDPDH 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    ++Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLYSYPILMTADILMF----NAHEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLGAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  ++   +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTAKPSQIEDIL-QAGAQKARKEARELL 323


>gi|194225360|ref|XP_001488771.2| PREDICTED: similar to WARS protein [Equus caballus]
          Length = 464

 Score = 53.6 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 79/233 (33%), Gaps = 28/233 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 142 LDAYENKKPFYLYTGRGPSSEAMHLGHLIPFIFTKWLQDVFNVPLVI-----------QM 190

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   + +            I  G       + ++  ++ S  Y ++++ I  
Sbjct: 191 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDIKKTFIFSDLEYMGSDFYRNVVK-IQK 249

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYD--CRLQMGG 199
             + N+      V+       S S  + ++  +Q     +  F ++ ++      L    
Sbjct: 250 HVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFRDRADIQCLIPCA 303

Query: 200 SDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
            DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 304 IDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 356


>gi|332192840|gb|AEE30961.1| nucleotidyl transferase domain-containing protein [Arabidopsis
           thaliana]
          Length = 748

 Score = 53.6 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 58/375 (15%), Positives = 118/375 (31%), Gaps = 48/375 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    Q  +  EL  L ++      Y G++ +   +H   G L ++M +  L   G +  
Sbjct: 33  RSVGEQCIHDDELKDLLAKKAAPVCYDGFEPSGR-MHIAQG-LMKIMNVNKLTSAGCRVK 90

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D        ++I+   E  K IF +    G    +   L +   
Sbjct: 91  IWIADWFAYMNNKLGGD-------LKKIRVVGEYFKEIFQAA---GMNSENVEFLWSSDE 140

Query: 132 LC--SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +     +Y  L+ +I    S+ ++     +   L   + LS     Y+ +Q  D   L  
Sbjct: 141 INAKGDEYWPLVMDIACRNSLAQIKRCMPIMG-LSENEELSAAHILYVCMQCADTFFL-- 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAIW 246
             +  +   G DQ    +   D  + +K   K   L+  +L        KM K+   +  
Sbjct: 198 --EADICQLGMDQQTVNLLARDYCDVVKRENKPVILSHHMLPGLQQGQKKMSKSDPSSAI 255

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
             +         +   N+           +   P  E  +   L              E 
Sbjct: 256 FME-------DEEAEVNVKIKKAYCPPDIVEGNPCLEYVKHIILPWFS------EFTVER 302

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG-LLTLIVKAGFATST 365
                G    +       +     +H + +      KD +S+ +  +L  +       + 
Sbjct: 303 DEKYGGNRTFKSFEDITTDYESGQLHPKDL------KDALSKALNKILQPVRDH--FKTN 354

Query: 366 NEARRHLKS-NAIKI 379
           + A+  LK     K+
Sbjct: 355 SRAKNLLKQVKGYKV 369



 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 101/337 (29%), Gaps = 36/337 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLF---WLQKTGHKP 70
           R    +     EL  L ++      Y G++ +   +H      +M +     L   G + 
Sbjct: 411 RSIGEECIQEDELKNLLAKKPAPICYDGFEPSGR-MHI--AQGVMKVTNVNKLTSAGCQV 467

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    + + +    D  R  +  +  +E  +            G        L    
Sbjct: 468 KIWIADWFAQLNNKLGGDLERIRVVGEYFKEIWQAG----------GMNNDKVEFLWASD 517

Query: 131 WLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +     KY  L+ +I    ++ R+L    +  R + E  LS  +  Y  +Q  D     
Sbjct: 518 EINGKGSKYWPLVMDIARRNNLRRILRCGQIMGRSETEV-LSAAQILYPCMQCADIF--- 573

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAI 245
              +  +   G DQ    +   +    +K   K   L+  +L        KM K+   + 
Sbjct: 574 -LLEADICQLGMDQRKVNMLAREYCADIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSA 632

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
              ++  +         ++++    ++    T      ++ +  +     NE K      
Sbjct: 633 IFMEDEEA---------DVNEKISKAYCPPKTVEGNPCLEYVKYIVLPRFNEFKVESEKN 683

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
                    E   A     E     +    M  ++I+
Sbjct: 684 GGNKTFNSFEDIVADYETGELHPEDLKKALMKALNIT 720


>gi|299472643|emb|CBN78295.1| Tryptophan--tRNA ligase [Ectocarpus siliculosus]
          Length = 609

 Score = 53.6 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 76/245 (31%), Gaps = 17/245 (6%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + LD+  +      Y G   ++ +LH GHL       +LQ+    P
Sbjct: 261 FLRRGLFFSHRDLTQILDLYEAGKKFFLYTGRGPSSDALHLGHLVPFHFTKYLQEAFKVP 320

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE        +++E            I  G       + ++  
Sbjct: 321 LVV------QLTD----DEKFLFKPELKLEECHRLAFENAKDIIACGFDPESTFIFSDLD 370

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++       ++ +I    + N++   F    S     Q+   ++       ++       
Sbjct: 371 YI--QHMYPVVLKIQKLVTYNQVRGIFGFTESHNIGCQAFPAVQAAPSFSSSFPIPLGGT 428

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIW 246
                L     DQ        D+  R+K  K   + +   P L    G     T S AI+
Sbjct: 429 PDRPCLIPCAIDQDAYFRMTRDVAPRMKLRKPALIHSRFFPGLQGPGGKMSSSTESSAIF 488

Query: 247 LNKEM 251
           +    
Sbjct: 489 VTDTP 493


>gi|114654737|ref|XP_001158558.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 455

 Score = 53.6 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 195

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 196 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 255

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 256 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 308

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 309 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 363


>gi|57090365|ref|XP_537554.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase
           (Tryptophan--tRNA ligase) (TrpRS) (IFP53) (hWRS) isoform
           1 [Canis familiaris]
          Length = 476

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 78/235 (33%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 152 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 201 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDIKKTFIFSDLDYMGMSPGFYKNVVKIQ 260

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S S  + ++  +Q     +  F ++ ++    +Q    
Sbjct: 261 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 313

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 314 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|332252583|ref|XP_003275432.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 5
           [Nomascus leucogenys]
          Length = 488

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 164 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 212

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 213 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 272

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S    + ++  +QA     +           +Q     
Sbjct: 273 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFQDRTDIQCLIPC 326

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 327 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 380


>gi|167381358|ref|XP_001735678.1| tryptophanyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165902203|gb|EDR28090.1| tryptophanyl-tRNA synthetase, cytoplasmic, putative [Entamoeba
           dispar SAW760]
          Length = 389

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 82/293 (27%), Gaps = 20/293 (6%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD +     +  Y G   ++ +LH GHL   +   +LQ      + +             
Sbjct: 68  LDDVEKGNKIYLYTGRGPSSDALHLGHLIPFIFTKYLQDAFDCQLVV------------- 114

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIG 145
              +       +     E  K    +       G           +    +   ++ +I 
Sbjct: 115 -QLTDDEKYLWKPVTIAETEKYAIENIKDIIAAGLNPKKTFIFTDYTYMERMYPVVTKIQ 173

Query: 146 SFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           S  + N++      +      + S   ++      +++  +   +   C +     DQ  
Sbjct: 174 SRVTFNQVKGIFGFQPHDNLGKISFPAIQAAPAFPESFPHLFGKQKIRCLIPC-AIDQDP 232

Query: 205 NIICGIDLGERLKTPKLFALT---SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
                 D  E L   K   +     P L  + G       + AI+L        +     
Sbjct: 233 YFRMTRDHAESLGAYKPSLIMSKFFPALQGSMGKMSASNPNSAIYLIDTPQQIADKINNH 292

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
                 D+  F K  T +      +  +    +  + +KI        +  ++
Sbjct: 293 AYCSVQDIEEFKKNGTKVADDVPYQYLRFFLNDDQQLEKIKNDYENAQMMPQD 345


>gi|109084888|ref|XP_001105363.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 4
           [Macaca mulatta]
 gi|109084892|ref|XP_001105508.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 6
           [Macaca mulatta]
          Length = 430

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 106 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 154

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 155 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 214

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S S  + ++  +QA     +           +Q     
Sbjct: 215 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFQDRTDIQCLIPC 268

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 269 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 322


>gi|145347977|ref|XP_001418435.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578664|gb|ABO96728.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 484

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 75/247 (30%), Gaps = 20/247 (8%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG           LD          Y G   ++ SLH GHL       WLQ    K 
Sbjct: 64  FLRRGMFFAHRELDLILDAYERGEKFYLYTGRGPSSESLHLGHLIPFQFTKWLQDA-FKV 122

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++             D+ + + +   ++E     +      I  G       + ++  
Sbjct: 123 PLVI----------QLTDDEKFLWKDLSLEECGRLARENAKDIIACGFDPKRTFIFSDVQ 172

Query: 131 WLCSIKYIDLLREIGSFFSVNR---MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           ++ +  Y ++++ I    ++N+   +  F    +  +     +    ++     + F E 
Sbjct: 173 YMSTPFYKNMMK-IAKCVTLNQVKGIFGFTGESNIGQVGFPPTQAAPSFPDCFPHMFGES 231

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFA--LTSPLLTTASGTKMGKTLSGA 244
             +  C +     DQ        D+  R+             P L   SG       + A
Sbjct: 232 KTSLRCLIPC-AIDQDPYFRMTRDVAPRIGGYKPALIESRFFPALKGESGKMSASDATSA 290

Query: 245 IWLNKEM 251
           I++    
Sbjct: 291 IYVTDTP 297


>gi|307105291|gb|EFN53541.1| hypothetical protein CHLNCDRAFT_25698 [Chlorella variabilis]
          Length = 416

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
             +RG      +    LD          Y G   ++ +LH GHL   M   WLQ     P
Sbjct: 78  FLKRGIFFAHRDLNELLDAYERGQPFYLYTGRGPSSEALHLGHLVPFMFTKWLQDAFRVP 137

Query: 71  ISL 73
           + +
Sbjct: 138 LVI 140


>gi|67970212|dbj|BAE01450.1| unnamed protein product [Macaca fascicularis]
          Length = 450

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 126 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 174

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 175 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 234

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S S  + ++  +QA     +           +Q     
Sbjct: 235 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFQDRTDIQCLIPC 288

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 289 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 342


>gi|332252577|ref|XP_003275429.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Nomascus leucogenys]
 gi|332252581|ref|XP_003275431.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 4
           [Nomascus leucogenys]
 gi|332252585|ref|XP_003275433.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 6
           [Nomascus leucogenys]
          Length = 472

 Score = 53.2 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 148 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 196

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 197 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 256

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S    + ++  +QA     +           +Q     
Sbjct: 257 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFQDRTDIQCLIPC 310

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 311 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 364


>gi|125991198|sp|Q6P7B0|SYWC_RAT RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
          Length = 481

 Score = 53.2 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMGQSPGFYKNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIP 312

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 313 CAIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|322489742|emb|CBZ25003.1| putative tyrosyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 682

 Score = 53.2 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 47/370 (12%), Positives = 107/370 (28%), Gaps = 35/370 (9%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L  +   +  Y G++ +   +H          +         G +
Sbjct: 11  RSVGEECVQESELRNLIEKKPLIRCYDGFEPSGR-MHIAQGVFKAVNVNKCTA---AGCE 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    +++ D                +  IE  K       K     +   + ++ 
Sbjct: 67  FVFWVADWFALMNDKVG---GELEKIRVVGRYLIEVWKAAGMDMDKVLFLWSSEEITSHA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
                  Y  ++ +IG   ++ R+    ++  + +    L+  +  Y ++Q  D   L  
Sbjct: 124 D-----TYWRMVLDIGRQNTIARIKKCCTIMGKTEGT--LTAAQVLYPLMQCCDIFFLK- 175

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                +   G DQ    +   +  + +    K   L+  +L      +   + S      
Sbjct: 176 ---ADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLAGLKQGQAKMSKSDPDSAI 232

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               +  +  +  R      V   A  +T       D  A +   + N         +  
Sbjct: 233 FMEDTAEDVARKIRQAYCPRVKQSATAIT-------DDGAPVATDDRNPVLDYFQCVVYA 285

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
                   +    A  E  + +  S  +   ++    +     LL  + +     S  EA
Sbjct: 286 RPGAAATVDGTTYATYEDLEQAFVSDEVSEDALKSCLIDEVNALLEPVRQH--FASNKEA 343

Query: 369 RRHLKSNAIK 378
              L+  A+K
Sbjct: 344 HELLE--AVK 351


>gi|109084884|ref|XP_001105228.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 2
           [Macaca mulatta]
          Length = 450

 Score = 53.2 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 126 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 174

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 175 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 234

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S S  + ++  +QA     +           +Q     
Sbjct: 235 KHVTFNQ------VKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFQDRTDIQCLIPC 288

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 289 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 342


>gi|147899131|ref|NP_001084545.1| tryptophanyl-tRNA synthetase [Xenopus laevis]
 gi|46250198|gb|AAH68695.1| MGC81110 protein [Xenopus laevis]
          Length = 475

 Score = 53.2 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ +LH GHL   +   WLQ+  + P+ +             
Sbjct: 152 LDAYENKKPFYLYTGRGPSSEALHVGHLIPFIFTKWLQEVFNVPLVV-----------QL 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   +++  +         I  G       + ++  ++             +
Sbjct: 201 TDDEKYLWKDLTLEKAYQYSIENAKDIIACGFDVNKTFIFSDLEYMGK-----SSGFYQN 255

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY--------DFVELAKNYDCRLQMG 198
              V + ++F  V+       S    + ++  +QA         +  +  K+  C +   
Sbjct: 256 VVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPEIFKGRKDIQCLIPC- 314

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 315 AIDQDPYFRMTRDVAPRINYPKPALMHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|308488674|ref|XP_003106531.1| hypothetical protein CRE_15979 [Caenorhabditis remanei]
 gi|308253881|gb|EFO97833.1| hypothetical protein CRE_15979 [Caenorhabditis remanei]
          Length = 431

 Score = 53.2 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 76/258 (29%), Gaps = 21/258 (8%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           ++  RG      +    LD          Y G   ++ SLH GHL   +   WLQ+    
Sbjct: 90  VMLRRGMFFAHRDFTSILDCKEKGEPFFLYTGRGASSGSLHLGHLVPFIFTKWLQEVFDV 149

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           P+ +              D+ + + +   +    +  +      I  G   T   + NN 
Sbjct: 150 PLIV-----------QMTDDEKFLWKDMTVDAAKKMSRENMKDIISVGFDLTKTFIFNNF 198

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL-SFLEFNYMILQAYDFVELA 188
            ++C   Y ++++    + +VN   +        +      +F         A  F  + 
Sbjct: 199 DYMCPPFYENIVK---IWKAVNGNQTRSIFGFTPEDCMGKAAFPAVEAAPCFASSFPHIF 255

Query: 189 KNYDC-----RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
                      L     DQ        D+  +LK  K   + S  L    G +   + S 
Sbjct: 256 GEKGKKNDIPCLIPCAIDQDPYFRMCRDVAPKLKASKPSLIFSTFLPALQGAQTKMSSSE 315

Query: 244 AIWLNKEMTSPYNFWQYW 261
                    +P       
Sbjct: 316 PNTCIFLDDTPKQIKNKI 333


>gi|32709|emb|CAA44450.1| IFP53 [Homo sapiens]
          Length = 471

 Score = 53.2 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 195

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 196 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 255

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 256 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 308

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 309 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 363


>gi|240080988|ref|ZP_04725531.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240117697|ref|ZP_04731759.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268597098|ref|ZP_06131265.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268603398|ref|ZP_06137565.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268550886|gb|EEZ45905.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268587529|gb|EEZ52205.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 336

 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 84/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +   + M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEQEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   S  ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANSENNQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLADGLAWGEAKKLSAAKINAELAEL 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                   S    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNALTSNPSQIEEIL-QAGAQKARKEARELL 323


>gi|260830629|ref|XP_002610263.1| hypothetical protein BRAFLDRAFT_115431 [Branchiostoma floridae]
 gi|229295627|gb|EEN66273.1| hypothetical protein BRAFLDRAFT_115431 [Branchiostoma floridae]
          Length = 417

 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 76/244 (31%), Gaps = 28/244 (11%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +    LD          Y G   ++ ++H GHL   M+  WLQ     P
Sbjct: 78  LLTRGMIFSHRDVNLILDAYEKGKPFFLYTGRGPSSEAMHVGHLIPFMITKWLQDIFDVP 137

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +    +E            I  G       + ++  
Sbjct: 138 LVI-----------QLTDDEKFLWKDLTAEEARRLASENAKDIIALGFDVDKTFIFSDMD 186

Query: 131 WL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL-- 187
           ++  S  +   + +I    + N+      V+       S    + ++  +QA        
Sbjct: 187 YIGSSPDFYRTMLKIQKCVTFNQ------VKGIFGFGDSTCIGKISFPSIQAAPSFSSSF 240

Query: 188 ------AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                  K+  C +     DQ        D+  RL  PK   L +  L    G     + 
Sbjct: 241 PQIFGGRKDIQCLIPC-AIDQDPYFRMTRDVAPRLGFPKPALLHTTFLPALQGAMTKMSA 299

Query: 242 SGAI 245
           S A+
Sbjct: 300 SDAV 303


>gi|186972755|pdb|2QUH|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Trp
 gi|186972757|pdb|2QUI|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Tryptophanamide And Atp
 gi|186972758|pdb|2QUI|B Chain B, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Tryptophanamide And Atp
 gi|186972759|pdb|2QUJ|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Trpamp
 gi|186972761|pdb|2QUK|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Atp(Putative)
 gi|253722573|pdb|2QUH|B Chain B, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Trp
          Length = 477

 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 195

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 196 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 255

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 256 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 308

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 309 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 363


>gi|156056190|ref|XP_001594019.1| hypothetical protein SS1G_05447 [Sclerotinia sclerotiorum 1980]
 gi|154703231|gb|EDO02970.1| hypothetical protein SS1G_05447 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 478

 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 63/255 (24%), Gaps = 15/255 (5%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG +    +    LD          Y G   ++ S+H GH        WLQ     P
Sbjct: 74  FMRRGIVFSHRDLNLMLDRHEKGEPFFLYTGRGPSSDSMHIGHTVPFEFTKWLQDVFDVP 133

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +      ++ D    DE       + I+E            I  G       M ++  
Sbjct: 134 LII------MLTD----DEKYIFSEKRTIEEVQSYTNSNAKDIIAVGFDPKKTFMFSDYD 183

Query: 131 WLCSIKYIDLL----REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++    Y ++         +        +  S   ++          F       +   E
Sbjct: 184 YMGGAFYKNVTRISKHVTLNVARAVFGFNESSCIGKIHFGAVQGATSFANSFPHIFGTDE 243

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
                   L     DQ        D+  RL   K   + +  L    G     + S    
Sbjct: 244 SKTTQIPSLIPCAIDQDPYFRMTRDVAARLHFAKPALIHARFLDALQGPGSKMSASVDTS 303

Query: 247 LNKEMTSPYNFWQYW 261
                  P       
Sbjct: 304 AIFMYDEPNKIKNKI 318


>gi|62460630|ref|NP_001013188.2| tryptophanyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
          Length = 475

 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMGQSPGFYKNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIP 312

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 313 CAIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|47419914|ref|NP_004175.2| tryptophanyl-tRNA synthetase, cytoplasmic isoform a [Homo sapiens]
 gi|47419916|ref|NP_776049.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform a [Homo sapiens]
 gi|114654707|ref|XP_001158980.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 9 [Pan troglodytes]
 gi|114654709|ref|XP_001159023.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 10 [Pan
           troglodytes]
 gi|332843138|ref|XP_001158843.2| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 6 [Pan
           troglodytes]
 gi|135191|sp|P23381|SYWC_HUMAN RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Interferon-induced protein 53; Short=IFP53;
           AltName: Full=Tryptophan--tRNA ligase; Short=TrpRS;
           Short=hWRS; Contains: RecName: Full=T1-TrpRS; Contains:
           RecName: Full=T2-TrpRS
 gi|30821|emb|CAA42545.1| 471 aa polypeptide (gamma2) [Homo sapiens]
 gi|184657|gb|AAA67324.1| transfer RNA-Trp synthetase [Homo sapiens]
 gi|17028363|gb|AAH17489.1| Tryptophanyl-tRNA synthetase [Homo sapiens]
 gi|28193186|emb|CAD62335.1| unnamed protein product [Homo sapiens]
 gi|55727244|emb|CAH90378.1| hypothetical protein [Pongo abelii]
 gi|119602106|gb|EAW81700.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119602107|gb|EAW81701.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119602108|gb|EAW81702.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119602109|gb|EAW81703.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|193786343|dbj|BAG51626.1| unnamed protein product [Homo sapiens]
 gi|261861536|dbj|BAI47290.1| tryptophanyl-tRNA synthetase [synthetic construct]
          Length = 471

 Score = 53.2 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 195

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 196 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 255

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 256 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 308

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 309 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 363


>gi|146345526|sp|Q5R4J1|SYWC_PONAB RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
          Length = 472

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 148 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 196

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 197 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 256

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 257 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 309

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 310 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 364


>gi|73963987|ref|XP_868547.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase
           (Tryptophan--tRNA ligase) (TrpRS) (IFP53) (hWRS) isoform
           3 [Canis familiaris]
          Length = 476

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 76/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 152 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   + +            I  G       + ++  ++             +
Sbjct: 201 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDIKKTFIFSDLDYMG-----TCPGFYKN 255

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM---G 198
              + + ++F  V+       S S  + ++  +Q     +  F ++ ++    +Q     
Sbjct: 256 VVKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIPC 314

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 315 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|197100226|ref|NP_001125071.1| tryptophanyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|55726863|emb|CAH90191.1| hypothetical protein [Pongo abelii]
          Length = 472

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 148 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 196

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 197 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 256

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 257 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 309

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 310 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 364


>gi|296268656|ref|YP_003651288.1| tryptophanyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091443|gb|ADG87395.1| tryptophanyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 337

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 62/192 (32%), Gaps = 22/192 (11%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ T H+    +    ++   P   D  RR   +   
Sbjct: 9   GIQPTADSFHLGNYLGAVRQYVALQDT-HEAFYFIADLHALTVSPKPEDLRRRTRVAAAQ 67

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                               ++         W        +L  +       RM  F+  
Sbjct: 68  LFAAG-----LDPDRSTVFVQSHVREHTELAW--------ILICLTGMGEAGRMTQFKD- 113

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +S    E   +   F Y ILQA D + + +     +   G+DQ  ++    DL +R    
Sbjct: 114 KSAKVGEGGTNVGLFTYPILQAADIL-MYQAEQVPV---GADQKQHLELSRDLAQRFNNR 169

Query: 218 TPKLFALTSPLL 229
             + F + SP +
Sbjct: 170 YGQTFVVPSPYI 181


>gi|171693919|ref|XP_001911884.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946908|emb|CAP73712.1| unnamed protein product [Podospora anserina S mat+]
          Length = 487

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 48/145 (33%), Gaps = 12/145 (8%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG +    +    LD          Y G   ++ S+H GH T  M   WLQ T   P
Sbjct: 82  FLRRGIVFSHRDFELILDRYERNEPFFLYTGRGPSSDSIHVGHCTPFMFTKWLQDTFDVP 141

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +      ++ D    DE       + I+E            I  G       + ++  
Sbjct: 142 LVI------MLTD----DEKYLFSEKRTIEEVQGYCDSNIRDIISMGFDPNKTFIFSDYD 191

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS 155
           ++    Y  +   +    ++N+  +
Sbjct: 192 YVGGAFYRQIT-RLAKHITLNQARA 215


>gi|15677325|ref|NP_274480.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|25009448|sp|Q9JYQ9|SYW_NEIMB RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|7226711|gb|AAF41828.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984617|gb|EFV63582.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140589|gb|EGC63109.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199918|gb|ADY95373.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 336

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 84/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNLDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDTPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFRELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG A +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAAKARKEARELL 323


>gi|323651386|gb|ADX97539.1| tyrosyl-tRNA synthetase [Courdo11 virus]
          Length = 424

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 70/246 (28%), Gaps = 15/246 (6%)

Query: 19  HQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +      L  L       TAY G++ +   +H    L  +M    + + G   I  +  
Sbjct: 101 EECDTIDRLKELVESFKNFTAYNGFEPSGR-IHIAQALITVMNTNTIIQNGGSMIIYIAD 159

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + +      D          +++  +  K     F   G   +    +    +     
Sbjct: 160 WFAQMNHKMGGD----------LEKIKDVGKYFIEVFKACGINMSGTKFIWASEFFNDNA 209

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                R +      +   +    +    +    LS  +  Y  +Q  D  EL       +
Sbjct: 210 TKYFERMLHIANKTSLARAKRCCQIMGRREGDELSSSQIIYPCMQVADIFEL-NPNGIDI 268

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
              G DQ    +  I+  +R        L+  +L    G+K   + S          S  
Sbjct: 269 CQLGVDQRKVNMLAIEYAKRNNLKTPIILSHHMLMGLKGSKNKMSKSDPENAIFMEDSRE 328

Query: 256 NFWQYW 261
           + ++  
Sbjct: 329 DIFKKI 334


>gi|332252575|ref|XP_003275428.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Nomascus leucogenys]
 gi|332252579|ref|XP_003275430.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 3
           [Nomascus leucogenys]
          Length = 430

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 106 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 154

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 155 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 214

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S    + ++  +QA     +           +Q     
Sbjct: 215 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFQDRTDIQCLIPC 268

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 269 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 322


>gi|156564609|gb|ABU80628.1| tryptophanyl-tRNA synthetase [Artemia franciscana]
          Length = 429

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 80/248 (32%), Gaps = 21/248 (8%)

Query: 12  LSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  RG     S+      LD +        Y G   ++ ++H GHL   +   WLQ+   
Sbjct: 90  LLRRGVF--FSHRDLHVILDCVEKGQKFYLYTGRGPSSDAMHLGHLIPFLFTKWLQEVFD 147

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            P+ +       I D     + +   +S  +++  E         I          +  N
Sbjct: 148 VPLII------QITD-----DEKYYWKSLSLEKVKEMAVENIKDIIAMDFHPDKTFIFRN 196

Query: 129 ETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVE 186
             ++  S+ + + L  I    +V+++             +    F +       A+  + 
Sbjct: 197 LEYMGQSVGFQETLARIQKLVTVSKIRGQFGFSDSDCMGKYPFPFNQAVPSFSSAFPQIF 256

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
             K     L   G DQ        D+  RLK  K   + +   P L  A+        + 
Sbjct: 257 KGKTNVPCLIPCGIDQDPYFRMTRDVAPRLKFLKPALVHSKFFPALQGANSKMSASDPNS 316

Query: 244 AIWLNKEM 251
           AI+L    
Sbjct: 317 AIFLTDTH 324


>gi|114654711|ref|XP_001158800.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 455

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 131 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 179

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 180 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 239

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 240 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 292

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 293 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 347


>gi|47419918|ref|NP_998810.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform b [Homo sapiens]
 gi|47419920|ref|NP_998811.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform b [Homo sapiens]
 gi|114654715|ref|XP_510164.2| PREDICTED: tryptophanyl-tRNA synthetase isoform 16 [Pan
           troglodytes]
 gi|114654717|ref|XP_001158622.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114654719|ref|XP_001158683.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 3 [Pan troglodytes]
 gi|114654721|ref|XP_001158743.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 4 [Pan troglodytes]
 gi|114654725|ref|XP_001158887.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 7 [Pan troglodytes]
 gi|114654727|ref|XP_001158929.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 8 [Pan troglodytes]
 gi|114654729|ref|XP_001159069.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 11 [Pan
           troglodytes]
 gi|114654731|ref|XP_001159119.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 12 [Pan
           troglodytes]
 gi|114654733|ref|XP_001159169.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 13 [Pan
           troglodytes]
 gi|114654735|ref|XP_001159219.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 14 [Pan
           troglodytes]
 gi|158255718|dbj|BAF83830.1| unnamed protein product [Homo sapiens]
          Length = 430

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 106 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 154

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 155 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 214

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 215 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 267

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 268 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 322


>gi|55733286|emb|CAH93325.1| hypothetical protein [Pongo abelii]
          Length = 472

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 78/235 (33%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 148 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 196

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 197 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 256

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 257 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 309

Query: 198 GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK   L +   P L  A         + +I+L  
Sbjct: 310 CAIDQDPYFRMTRDVAPRIGYPKLALLHSTFFPALQGAQTKMSASDPNSSIFLTD 364


>gi|38197552|gb|AAH61752.1| Wars protein [Rattus norvegicus]
          Length = 379

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +             
Sbjct: 106 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI-----------QM 154

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 155 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMGQSPGFYKNVVKIQ 214

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 215 KHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIP 267

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 268 CAIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 322


>gi|298368649|ref|ZP_06979967.1| tryptophan--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282652|gb|EFI24139.1| tryptophan--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 336

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 84/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVREAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +      ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANVENNQEDPDH 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    ++Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLYSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEVFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG A +  EAR  L
Sbjct: 291 RERYNELTANPSQIEDIL-QAGAAKARKEARELL 323


>gi|196006033|ref|XP_002112883.1| hypothetical protein TRIADDRAFT_56472 [Trichoplax adhaerens]
 gi|190584924|gb|EDV24993.1| hypothetical protein TRIADDRAFT_56472 [Trichoplax adhaerens]
          Length = 450

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 21/71 (29%), Gaps = 2/71 (2%)

Query: 11 ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  R    ++     L     +  ++ Y G   T    H G+   +  +    K G   
Sbjct: 14 QLITRNL-QEVIGEERLLKTLKEKDISLYWGTATTGRP-HVGYFVPISKIADFLKAGCHV 71

Query: 71 ISLMGGGTSII 81
          I L       +
Sbjct: 72 IILFADLHGYL 82


>gi|126290236|ref|XP_001367513.1| PREDICTED: similar to WARS protein [Monodelphis domestica]
          Length = 476

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 74/234 (31%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 152 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 201 TDDEKYLWKELTLEQAYGYTIENAKDIIACGFDINKTFIFSDLEYMGSSPGFYKNVVKIQ 260

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---G 198
              + N+      V+       S    + ++  +QA     +           +Q     
Sbjct: 261 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFKDRTDIQCLIPC 314

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 315 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|325128568|gb|EGC51441.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 336

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNLDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|291298422|ref|YP_003509700.1| tryptophanyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290567642|gb|ADD40607.1| tryptophanyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 344

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 35/243 (14%)

Query: 34  GVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                  G   TA S H G+    L     +Q T H     +    +I  D         
Sbjct: 12  RRPRVLSGIQPTADSFHLGNYLGALRNWVAMQDT-HDAFYCVVDLHAITVD--------- 61

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VN 151
               + +++          +        T  +          +    +L  I    +   
Sbjct: 62  -HDPKLLRKRSRIAAAQLLAVGIDPARSTLFVQ-------SQVPEHPMLSWILECHTGFG 113

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                   + +  + + +S   F Y ILQA D + L +     +   G DQ  ++    D
Sbjct: 114 EAGRMTQFKDKSAKNERVSVGLFTYPILQAADIL-LYRADAVPV---GEDQRQHLELSRD 169

Query: 212 LGERLKTPKLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L +R  T      T P   +  A+GT         KM K+ S    +   +  P    + 
Sbjct: 170 LAQRFNTKYGNVFTVPEAHIIKATGTIQDLTEPARKMSKSNSQPAGIIDLLDDPNRIRKK 229

Query: 261 WRN 263
            ++
Sbjct: 230 IKS 232


>gi|300782771|ref|YP_003763062.1| tryptophanyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299792285|gb|ADJ42660.1| tryptophanyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 343

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 80/250 (32%), Gaps = 35/250 (14%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII--GDP 84
           +   ++       G   TA S H G+    L     LQ T H+    +    +I    DP
Sbjct: 4   EQTVAERRPRVLSGIQPTADSFHLGNYLGALRQWVRLQDT-HETFYSVVDLHAITVEQDP 62

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
                 R+  R    Q     I    S+          A      +W        +L   
Sbjct: 63  K---VLRQRTRVSAAQLLAIGIDPQRSALFVQSHVPEHA----QLSW--------VLECQ 107

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
             F    RM  F+  +S  +     S   F Y +LQA D + L +     +   G DQ  
Sbjct: 108 TGFGEAGRMTQFKD-KSAKQGSDRSSVGLFTYPVLQAADIL-LYRADAVPV---GEDQRQ 162

Query: 205 NIICGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTS 253
           ++    DL +R      K F +  P +   +           KM K+ S    + + +  
Sbjct: 163 HLELTRDLAQRFNNRLGKTFVVPEPYIIKDTAKIYDLQEPTAKMSKSASNVNGIIELLED 222

Query: 254 PYNFWQYWRN 263
           P    +  R+
Sbjct: 223 PKRSAKKIRS 232


>gi|254486476|ref|ZP_05099681.1| ribosomal large subunit pseudouridine synthase B [Roseobacter sp.
           GAI101]
 gi|214043345|gb|EEB83983.1| ribosomal large subunit pseudouridine synthase B [Roseobacter sp.
           GAI101]
          Length = 336

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            K +   G  +  ++ +AG A S  EA R +++  +++N   I +  L +   D  
Sbjct: 10  PKTDTPPGDRIAKVLSRAGLA-SRREAERMIEAGRVRVNGVQIDSPALNVTAADNI 64


>gi|149636940|ref|XP_001513011.1| PREDICTED: similar to WARS protein [Ornithorhynchus anatinus]
          Length = 474

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 150 LDAYENKKPFYLYTGRGPSSEAMHLGHLIPFIFTKWLQDVFNVPLVI-----------QM 198

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 199 TDDEKYLWKDLTLEQAYGYAVENAKDIIACGFDIKKTFIFSDLDYMGMSPGFYKNVVKIQ 258

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYD--CRLQMG 198
              + N+      V+       S    + ++  +Q     +  F ++ K+      L   
Sbjct: 259 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFKDKKDVQCLIPC 312

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 313 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 366


>gi|156089189|ref|XP_001612001.1| tRNA synthetases class I (W and Y) family protein [Babesia bovis]
 gi|154799255|gb|EDO08433.1| tRNA synthetases class I (W and Y) family protein [Babesia bovis]
          Length = 388

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 83/310 (26%), Gaps = 32/310 (10%)

Query: 40  IGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            G   T   LH G+    +      Q  G     L+    +                   
Sbjct: 66  AGIQPTGD-LHIGNYIGCIKPAVEYQTAGGALNVLIADLHA-------------TTEHNT 111

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                + I+   ++ +  G     + ++    +    + ++L   + +  S+ R+    +
Sbjct: 112 TVNLSDSIRRTVATLLSCGVDPDRSAIILQSDF---PEILELHWILSTVISIGRLRKLAN 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R   +   S  EF Y +L A D +           + G DQ  ++    ++ ++L  
Sbjct: 169 FEHRQVAQDGDSVAEFLYPLLMAADVLC----SGSDSIIAGEDQLSHVCVIREVAKKLNR 224

Query: 219 --PKLFALTSPLLTT--------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                      +L              KM K+   A        +    +Q  +    + 
Sbjct: 225 LAGSTVVCIPDMLPNTGFRVISLDGRGKMSKSSLQACSRINITDTEETIYQKIKVAKTST 284

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
             + +  +T L                 + +  +  E    V                 D
Sbjct: 285 DDTSSTEVTNLRRLLKFFSGDSGANIPGDIQFSLLKEHLHQVVTTYLRPIRQRYNEILLD 344

Query: 329 MSIHSQHMPT 338
            +  S  + +
Sbjct: 345 DTAVSSALKS 354


>gi|224051727|ref|XP_002200606.1| PREDICTED: tryptophanyl-tRNA synthetase [Taeniopygia guttata]
          Length = 473

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 82/250 (32%), Gaps = 29/250 (11%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ+    P
Sbjct: 134 FLRRGIFFSHRDMDQILDAYENKKPFYLYTGRGPSSQAMHVGHLIPFLFTKWLQEVFDVP 193

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   +++  E  +      I  G       + ++  
Sbjct: 194 LVI-----------QLTDDEKYLWKDMTVEKAYEYARENAKDIIACGFDINKTFIFSDLD 242

Query: 131 WL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AY 182
           +L  S  +   + ++    + N+      V+       S    + ++  +Q       ++
Sbjct: 243 YLGTSAGFYKNIVKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSF 296

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGK 239
             +   K     L     DQ        D+  R+  PK     ++  P L  A       
Sbjct: 297 PQIFNGKENIQCLIPCAIDQDPYFRMTRDVAPRIGQPKPALLHSVFFPALQGAQTKMSAS 356

Query: 240 TLSGAIWLNK 249
             + +I+L  
Sbjct: 357 DPNSSIFLTD 366


>gi|115671140|ref|XP_787967.2| PREDICTED: similar to tyrosyl-tRNA synthetase [Strongylocentrotus
           purpuratus]
 gi|115951639|ref|XP_001194179.1| PREDICTED: similar to tyrosyl-tRNA synthetase [Strongylocentrotus
           purpuratus]
          Length = 524

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 61/223 (27%), Gaps = 24/223 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R    ++    +L+    +G  +  Y G   T    H  +   +  L    + G +
Sbjct: 12  DLITRNL-QEVLGRDKLESFLKEGKDIAVYWGTATTGKP-HIAYFVPMSKLADFLRAGCQ 69

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLN 127
              L+      +           M    E+ E   K        +    G        + 
Sbjct: 70  VTILLADLHGYL---------DNMKAPWELLELRTKYYEHLIKAMLESIGVPIEKLRFIR 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLS--FESVRSRLKREQSLSFLEFNYMILQAYDFV 185
              +  S +Y   +  + S  + +       E V+               Y  LQA D  
Sbjct: 121 GTDYQLSKEYTLDVYRLSSVVTEHDAKKAGAEVVKQVDHP----LLSGLLYPGLQALDEE 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
            L        Q GG DQ            +L   K   L +P+
Sbjct: 177 YLK----VDAQFGGVDQRKIFTFAEKYMPQLGYTKRIHLMNPM 215


>gi|224097478|ref|XP_002310952.1| predicted protein [Populus trichocarpa]
 gi|222850772|gb|EEE88319.1| predicted protein [Populus trichocarpa]
          Length = 352

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 83/243 (34%), Gaps = 21/243 (8%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L  +  +   Y G++ +   +H   G +  + +   L K G K  
Sbjct: 11  RSVGEECIQEDELRNLLDKKPLPICYDGFEPSGR-MHIAQGVMKTINVNK-LTKAGCKVK 68

Query: 72  SLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             +    + + +    D +  + +    I+        I    +++     +     +E 
Sbjct: 69  IWIADWFAQLNNKMGGDLKKIKTVGEYLIEIWKAVGMDIDGDKVEFLWSSDEINSRAHEY 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W        L+ +I     + R++    +  R ++++ L+  +  Y  +Q  D   L   
Sbjct: 129 W-------PLVMDIARRNKLPRIMRCVQIMGRSEQDE-LTAAQIFYPCMQCADIFFLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAIWL 247
               +   G DQ    +   +  + +K   K   L+  +L        KM K+   +   
Sbjct: 179 --ADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIF 236

Query: 248 NKE 250
            ++
Sbjct: 237 MED 239


>gi|332138049|pdb|2KTL|A Chain A, Structure Of C-Terminal Domain From Mttyrrs Of A. Nidulans
          Length = 164

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/117 (10%), Positives = 30/117 (25%), Gaps = 20/117 (17%)

Query: 321 TAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             +        +  +MP+  ++    +        ++  AG   S +E +R + +N   +
Sbjct: 20  PQSGNPHAPQTNFANMPSARVTLPKSLVYDKTFSKVLWSAGLVASKSEGQRIINNNGAYV 79

Query: 380 N---NSI----------------ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
                                  I         +       + L  GK    +  + 
Sbjct: 80  GSRPGVKKNEPGGGMPDDLTFTPIKTWNASKTQEFIIDGDLLILKLGKWKMKLVSIV 136


>gi|330845266|ref|XP_003294514.1| tyrosine-tRNA ligase [Dictyostelium purpureum]
 gi|325075005|gb|EGC28955.1| tyrosine-tRNA ligase [Dictyostelium purpureum]
          Length = 383

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 83/257 (32%), Gaps = 25/257 (9%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHA--GHLTQL 57
           +     + L ++ + G   +I +   L  L + +  +  Y G++ +   +H   G L  +
Sbjct: 35  LSEKNKERLELIKQVG--EEIISEESLIRLLNGKERLRCYDGFEPSGR-MHIAQGILKSI 91

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
            +   + K G   I  +    +++ +   +         +  Q  IE  K         G
Sbjct: 92  NV-NRMTKAGCTFIFWVADWFAMLNN---KMNGDLNKIRKVGQYMIEIWKAT-------G 140

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNY 176
               +   L +   +        LR +      N     +  +      E  L   +  Y
Sbjct: 141 MDMENVEFLWSSDEINKNPNDYWLRVMDIARKFNVPRIKKCSQIMGRNEEDDLMCAQLLY 200

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTAS 233
             +Q  D   L       +   G DQ    +  I+  +++K   K   ++  +L      
Sbjct: 201 PCMQCADIFYLK----ADICQLGMDQRKVNMLAIEYCDKVKIKNKPIIVSHHMLSGLKEG 256

Query: 234 GTKMGKTLSGAIWLNKE 250
             KM K+   +    ++
Sbjct: 257 QEKMSKSDPESAIFMED 273


>gi|226529175|ref|NP_001149217.1| LOC100282839 [Zea mays]
 gi|195625536|gb|ACG34598.1| tyrosyl-tRNA synthetase [Zea mays]
          Length = 379

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 75/248 (30%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           RG   +     EL  L     V   Y G++ +   +H          +  +      G K
Sbjct: 41  RGIGEECIQEDELRRLLENKPVPICYDGFEPSGR-MHIAQGIVKTINVNKMVR---AGCK 96

Query: 70  PISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
               +    + + +    D +  + +    I+                G        L +
Sbjct: 97  VKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAA-----------GMNLDGVEFLWS 145

Query: 129 ETWLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
              +     +Y  ++ +I    +V R+     +  R  ++  L+  +  Y  +Q  D   
Sbjct: 146 SEEINRRAHEYWPIVMDIARKNNVKRITRCCQIMGRSDQDD-LTAAQIFYPCMQCADIFF 204

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSG 243
           L       +   G DQ    +   +  + +K   K   L+  +L        KM K+   
Sbjct: 205 LK----ADICQLGMDQRKVNVLAREYCDYIKRKNKPIILSHHMLPGFKEGQEKMSKSDPS 260

Query: 244 AIWLNKEM 251
           +    ++ 
Sbjct: 261 SAIFMEDD 268


>gi|167388657|ref|XP_001738643.1| tyrosyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165898007|gb|EDR25011.1| tyrosyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 369

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 79/259 (30%), Gaps = 24/259 (9%)

Query: 10  SILSER-----GFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLT-QLMLLFW 62
             +  R     G + +     +L  L  +     AY G++ +   +H       ++    
Sbjct: 12  EEIEARITKLLGAVEECDTINDLRALFKEKSHFVAYNGFEPSGR-IHIAQAVMTVINANK 70

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           + + G      +    + +      D          + +     K     F   G  +  
Sbjct: 71  IHECGGLYKIYIADWFAQLNHKMGGD----------LSKIQILGKYFIEVFKACGIQEGA 120

Query: 123 ALMLNNETWLCS-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           A  +     + +   Y  L+ +I +  +VNR+     +  R +++  LS  +  Y  +Q 
Sbjct: 121 AEFVWASDLIQNSKTYWPLVLDIATKNTVNRITRCSQIMGRDEKDA-LSTSQLIYPCMQC 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D  EL       +   G DQ    +   +    +       L+  +L    G K GK  
Sbjct: 180 ADIFEL----GADVCQLGLDQRKVNMLAREYAPTVNRKAPIVLSHHMLMGLKGPKAGKMS 235

Query: 242 SGAIWLNKEMTSPYNFWQY 260
                    M   Y   + 
Sbjct: 236 KSIPDSAIFMDDSYEEIKR 254


>gi|309378341|emb|CBX23038.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 336

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 82/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANTENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLSEGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ + G   +  EAR  L
Sbjct: 291 RERYNELTADPSQIEDIL-QTGAQKARKEARELL 323


>gi|290994863|ref|XP_002680051.1| tyrosyl-tRNA synthetase [Naegleria gruberi]
 gi|284093670|gb|EFC47307.1| tyrosyl-tRNA synthetase [Naegleria gruberi]
          Length = 395

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 60/203 (29%), Gaps = 21/203 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV--VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKP 70
           R    +     EL +L       +  Y G++ +   +H   G +  + +   L K G K 
Sbjct: 49  RSVGEECIQEDELRVLIKNKKEQIICYDGFEPSGR-IHIAQGVMKAINVNK-LTKAGCKF 106

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+    +++                ++++     K +   +   G    +   + +  
Sbjct: 107 IFLVADWFALMN----------NKMDGDLEKIQTVGKYMIEVWKSIGMDLNNVEFVWSSE 156

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAK 189
            +        L  +    + N        +       + LS  +  Y  +Q  D   L  
Sbjct: 157 IINKDPNTYWLNVLDIARNNNLARIKRCSQIMGRNEAEDLSAAQIFYPCMQCADIFYLK- 215

Query: 190 NYDCRLQMGGSDQWGNIICGIDL 212
                +   G DQ    +   + 
Sbjct: 216 ---ADICQLGMDQRKVNMLAREY 235


>gi|117927599|ref|YP_872150.1| tryptophanyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117648062|gb|ABK52164.1| tryptophanyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 340

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 60/209 (28%), Gaps = 28/209 (13%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRD 88
           +        G   TA S H G+      L     LQ T H     +    ++        
Sbjct: 8   TGRRPRVLSGIQPTADSFHLGNYLG--ALRHWVALQDT-HDAFYCVVDLHAL-------- 56

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
                      ++   + +   +  +  G   +   +          +   +   +  + 
Sbjct: 57  -----TLEWVPEQLRARTRIAAAQLLAIGLDPSRCTLFIQSHVPEHTELAWIFGCLTGYG 111

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
             +RM      + +  R + +    F Y ILQA D       Y   L   G DQ  ++  
Sbjct: 112 EASRMTQ---FKDKASRSEHVGVGLFTYPILQAADI----ALYHADLVPVGEDQRQHLEL 164

Query: 209 GIDLGERLK--TPKLFALTSPLLTTASGT 235
             +L +R        F +  P +   +  
Sbjct: 165 TRNLTQRFNARFGPTFTVPEPYIVGETRK 193


>gi|242085756|ref|XP_002443303.1| hypothetical protein SORBIDRAFT_08g017220 [Sorghum bicolor]
 gi|241943996|gb|EES17141.1| hypothetical protein SORBIDRAFT_08g017220 [Sorghum bicolor]
          Length = 408

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 81/243 (33%), Gaps = 17/243 (6%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD+         Y G   ++ +LH GHL   M   +LQ+   K 
Sbjct: 70  FLRRGLFFAHRDLNELLDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEA-FKV 128

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++             D+ + + ++  +QE+    +      I  G       + ++ +
Sbjct: 129 PLVI----------QLTDDEKFLWKNLTVQESKRLARENAKDIIACGFDIERTFIFSDFS 178

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           ++    Y +++ ++    ++N+ +            + S   ++       ++  +   K
Sbjct: 179 YVGGAFYENMM-QVARCVTMNKAIGIFGFNLEDHIGKVSFPPVQAVPSFPSSFPHLFAGK 237

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIW 246
           +    L     DQ        D+  R+   K   + +   P L   +        + AI+
Sbjct: 238 DQLRCLIPCAIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQGENTKMSASDANSAIY 297

Query: 247 LNK 249
           +  
Sbjct: 298 VTD 300


>gi|222147750|ref|YP_002548707.1| hemolysin A [Agrobacterium vitis S4]
 gi|221734738|gb|ACM35701.1| hemolysin A [Agrobacterium vitis S4]
          Length = 263

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
               L  L+V      S + AR  ++   +K+N   ++   L     
Sbjct: 11  EPQRLDQLLVALNLFASRSRARDAVQRGGVKVNGRTVTKPSLTFSPD 57


>gi|149044170|gb|EDL97552.1| rCG27710, isoform CRA_d [Rattus norvegicus]
          Length = 472

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 31/234 (13%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   +++            I  G       +        S  +   + +I  
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIF--SDLEQSPGFYKNVVKIQK 257

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM---G 198
             + N+      V+       S    + ++  +Q     +  F ++ ++    +Q     
Sbjct: 258 HVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDR-TDIQCLIPC 310

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 311 AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 364


>gi|55731324|emb|CAH92376.1| hypothetical protein [Pongo abelii]
          Length = 472

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 148 LDAYENKKPFYLYTGRSPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 196

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 197 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 256

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + ++      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 257 KHVTFSQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 309

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 310 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 364


>gi|294952951|ref|XP_002787529.1| IFP53, putative [Perkinsus marinus ATCC 50983]
 gi|239902535|gb|EER19325.1| IFP53, putative [Perkinsus marinus ATCC 50983]
          Length = 600

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 69/261 (26%), Gaps = 20/261 (7%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ SLH GHL       WLQ T   P
Sbjct: 249 FLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVP 308

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE         ++E            I  G       + ++  
Sbjct: 309 LVI------QLTD----DEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLD 358

Query: 131 WLCSIKYIDLLREIGSFFSVNR----MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++ ++       +    ++  R        +SV        S   ++ +      +  + 
Sbjct: 359 YMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVAK-----SSFCAIQASPSFSTTFPSIF 413

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
             +     L     DQ        D+  R+   K   + S       G K   + S    
Sbjct: 414 GDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHKTKMSGSVGNT 473

Query: 247 LNKEMTSPYNFWQYWRNIDDA 267
                 SP            +
Sbjct: 474 TIMVTDSPKEIKSKIMKYCFS 494


>gi|258651530|ref|YP_003200686.1| tryptophanyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258554755|gb|ACV77697.1| tryptophanyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 338

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 64/217 (29%), Gaps = 24/217 (11%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
           +        G   TA S H G+    L     +Q T H+    +    +I        E 
Sbjct: 7   TDRKPRVLSGIQPTADSFHIGNYLGALRQWVRMQDT-HECFYSVVDLHAI------TVEQ 59

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
              +     +    ++  +     +     ++        +W      ++ L   G    
Sbjct: 60  DPAVLRHRTRVAAAQLLALGLDPERCTLFVQSQVPAHTQLSW-----VMECLTGFGEASR 114

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S+       S   F Y ILQA D +     Y       G DQ  ++   
Sbjct: 115 MTQFKD----KSQRGGADRSSVGLFTYPILQAADILA----YQADAVPVGEDQRQHLELT 166

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L +R        F +  P +  ++      T   A
Sbjct: 167 RNLAQRFNARYGPTFVVPEPYILKSTAKIYDLTEPRA 203


>gi|241758834|ref|ZP_04756947.1| tryptophan--tRNA ligase [Neisseria flavescens SK114]
 gi|241321042|gb|EER57255.1| tryptophan--tRNA ligase [Neisseria flavescens SK114]
          Length = 367

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 86/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q +  +    +     II     +     M+           + 
Sbjct: 48  HLGNYVGAIRPAIRAAQDSNTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 102

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              +        ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 103 CGLNPEQTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQTNTENGQDDPDH 160

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    ++Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 161 GVEMGLYSYPILMTADILMF----NAHEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 216

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 217 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 263

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 264 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLSAKINAELAEP 321

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  ++   +  ++ ++G   +  EAR  L
Sbjct: 322 RKRYNELTAKPSQIEDIL-QSGAQKARKEARELL 354


>gi|42543730|pdb|1ULH|A Chain A, A Short Peptide Insertion Crucial For Angiostatic Activity
           Of Human Tryptophanyl-Trna Synthetase
 gi|42543731|pdb|1ULH|B Chain B, A Short Peptide Insertion Crucial For Angiostatic Activity
           Of Human Tryptophanyl-Trna Synthetase
          Length = 390

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 66  LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 114

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 115 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 174

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAKNYD--CRLQMG 198
              + N+      V+       S    + ++  +QA       F ++ ++      L   
Sbjct: 175 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPC 228

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 229 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 282


>gi|194697136|gb|ACF82652.1| unknown [Zea mays]
          Length = 379

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 76/248 (30%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           RG   +     EL  L     V   Y G++ +   +H          +  +      G K
Sbjct: 41  RGIGEECIQEDELRRLLENKPVPICYDGFEPSGR-MHIAQGIVKTINVNKMVR---AGCK 96

Query: 70  PISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
               +    + + +    D +  + +    I+                G        L +
Sbjct: 97  VKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAA-----------GMNLDGVEFLWS 145

Query: 129 ETWLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
              +     +Y  ++ +I    +V R++    +  R  ++  L+  +  Y  +Q  D   
Sbjct: 146 SEEINRRAHEYWPIVMDIARKNNVKRIMRCCQIMGRSDQDD-LTAAQIFYPCMQCADIFF 204

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSG 243
           L       +   G DQ    +   +  + +K   K   L+  +L        KM K+   
Sbjct: 205 LK----ADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGFKEGQEKMSKSDPS 260

Query: 244 AIWLNKEM 251
           +    ++ 
Sbjct: 261 SAIFMEDD 268


>gi|340368|gb|AAA61298.1| transfer RNA-Trp synthetase [Homo sapiens]
          Length = 471

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 195

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 196 TDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 255

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 256 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 308

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 309 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 363


>gi|2851538|sp|P23612|SYWC_RABIT RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
          Length = 475

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFDVPLVV-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQVYGYTLENAKDIIACGFDVNKTFIFSDLDYMGMSPGFYKNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY--------DFVELAKNYDCRLQM 197
              + N+      V+       S    + ++  +QA                +  C +  
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFHGQADIQCLIPC 313

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 314 -AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|261364439|ref|ZP_05977322.1| tryptophan--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567349|gb|EFC88909.1| tryptophan--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 336

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 85/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +      ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANVENNQEDPDH 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    ++Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLYSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEVFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K    +  T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTSSETAAFTQMLAEGLAWGEAKKLLATKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG A +  EAR  L
Sbjct: 291 RERYNELTANPSQIEDIL-QAGAAKARKEARELL 323


>gi|28572846|ref|NP_789626.1| tryptophanyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|39932167|sp|Q83HC3|SYW_TROW8 RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|28410979|emb|CAD67364.1| tryptophanyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 335

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 75/258 (29%), Gaps = 37/258 (14%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                   G   ++  LH G+    +  F  +Q   +    ++    S+    +F     
Sbjct: 9   NKKPVVLSGIQPSSGMLHLGNYLGALKSFGRMQD-DYTTYFMLANLHSM----TFPQNPE 63

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            ++R   I+   + I             ++D    N   W            +G+  +  
Sbjct: 64  -VLRENTIRIAAQCIAAGIDPAKSIVFLQSDVYQHNQLAW-----------VLGNVCTFG 111

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                   + +  ++ ++S   F Y IL A D +     YD      G+DQ  ++     
Sbjct: 112 EAARMTQFKDKSGKQGNISTGLFTYPILMASDIL----LYDSAFVPVGADQKQHLELTRT 167

Query: 212 LGERLKTPKLFALTS-----------PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           L  R      +  T                     KM K+ +        + SP    + 
Sbjct: 168 LARRFNA--QYGQTFLVPQPFECSIRIYDLQDPAVKMSKSSATESGTIFLLDSPDKIVKK 225

Query: 261 WRN--IDDADVVSFAKRL 276
                 D  DV+ + +  
Sbjct: 226 IMRSVTDSEDVIGYDRET 243


>gi|186972760|pdb|2QUJ|B Chain B, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Trpamp
          Length = 384

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 54  LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 102

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 103 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 162

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAKNYD--CRLQMG 198
              + N+      V+       S    + ++  +QA       F ++ ++      L   
Sbjct: 163 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPC 216

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 217 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 270


>gi|112489952|pdb|2AKE|A Chain A, Structure Of Human Tryptophanyl-Trna Synthetase In Complex
           With Trna(Trp)
 gi|112490495|pdb|2DR2|A Chain A, Structure Of Human Tryptophanyl-Trna Synthetase In Complex
           With Trna(Trp)
          Length = 384

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 54  LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 102

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 103 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 162

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAKNYD--CRLQMG 198
              + N+      V+       S    + ++  +QA       F ++ ++      L   
Sbjct: 163 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPC 216

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 217 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 270


>gi|50513261|pdb|1O5T|A Chain A, Crystal Structure Of The Aminoacylation Catalytic Fragment
           Of Human Tryptophanyl-Trna Synthetase
          Length = 378

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 54  LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 102

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 103 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 162

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAKNYD--CRLQMG 198
              + N+      V+       S    + ++  +QA       F ++ ++      L   
Sbjct: 163 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPC 216

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 217 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 270


>gi|328865202|gb|EGG13588.1| tyrosine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 385

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 77/239 (32%), Gaps = 23/239 (9%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +I +   L  L + +  +  Y G++ +   +H   G L  + +   + K G   I  + 
Sbjct: 51  EEIVSEENLAALLTAKQKLRCYDGFEPSGR-MHIAQGILKSINV-NRMTKAGCTFIFWVA 108

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ +    D          + +  +  + +   +   G    +   L +   +   
Sbjct: 109 DWFAMLNNKMGGD----------LVKIRKVGQYMIEIWKATGMDMENVEFLWSSDEINKG 158

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
                LR +      N        +      E  LS  +  Y  +Q  D   L       
Sbjct: 159 ANDYWLRVMDIARKFNVPRIKRCSQIMGRGDEDDLSVAQILYPCMQCADIFYLK----AD 214

Query: 195 LQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASGTKMGKTLSGAIWLNKE 250
           +   G DQ    +  ++  E+LK   K   ++  +L        KM K+   +    ++
Sbjct: 215 ICQLGLDQRKVNMLALEYCEKLKIKHKPIIVSHHMLMGLKEGQEKMSKSDPESAIFMED 273


>gi|301096589|ref|XP_002897391.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262107082|gb|EEY65134.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 765

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 23/286 (8%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTAS-SLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           ++ +   +   +    AY G++ +   +L +G L + +    L   G     L+    ++
Sbjct: 57  TDAQLRALFTEKTHPIAYDGFEPSGRVTLASG-LLRALNAKRLMDAGCHVRLLVADTHAL 115

Query: 81  IGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           + +    D +  + + +  ++                    +     +         Y  
Sbjct: 116 LNNKFGGDLKKLQSVSTYMVEVWKALGLDADKLPNLEIMLASTETARHA------GAYWS 169

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            + +    F+V R+     +  R   +   +     Y ++Q  D           +   G
Sbjct: 170 QVLDAAGRFTVERVQQCAPIMGRKTDDAVHNTNRILYPLMQLADGF----LLQADIYQLG 225

Query: 200 SDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           +DQ        D    + L    +F LT PLL      +   T + A        +    
Sbjct: 226 ADQDAGNELVRDYIAQKELSNKPVF-LTHPLLLGLKQEQFKMTTTDAESAIYVDDTAAEV 284

Query: 258 WQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
               +        ++   V+++ K L     ++   + + +    N
Sbjct: 285 KTKIKKAYCVPGEVEGNPVLNYMKYLVFPLHADGVTLERSEKNGGN 330



 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 82/252 (32%), Gaps = 30/252 (11%)

Query: 12  LSERGFI-----HQISNPRELDILCSQG-VVTAYIGYDLTASSLHA--G--HLTQLMLLF 61
           L ER  +      +     EL+ L  +      Y G++ +   +H   G      +  L 
Sbjct: 420 LEERYAVARSVGEECIQENELEDLLEKKDHPVCYDGFEPSGR-MHIAQGVLRTVNVNKLT 478

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
                G      +    +++ +    D   ++    +    I K  G+  + +++     
Sbjct: 479 ---SAGSVFRFWVADWFAMLNNKMGGD-LDKIRMVGQYMVEIWKSVGMDMTNVEFLWASH 534

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
             +  +   WL        + +I    ++ R L   ++  R ++E  +   +  Y ++Q 
Sbjct: 535 KIISHSGSYWLR-------VMDIARRTTIARTLKCCTIMGRKEKE-GMQAAQILYPLMQC 586

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLL-TTASGTKMG 238
            D   L       +   G DQ    +   D     +++   +      L+       KM 
Sbjct: 587 ADIFNLK----ADICQLGIDQRKINMLARDYCDQAKIRFKPIILSHHMLMGLKEGQEKMS 642

Query: 239 KTLSGAIWLNKE 250
           K+   +    ++
Sbjct: 643 KSDPESAIFMED 654


>gi|302524150|ref|ZP_07276492.1| tryptophanyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302433045|gb|EFL04861.1| tryptophanyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 339

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 79/244 (32%), Gaps = 31/244 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
             G +    G   TA S H G+    L     LQ T H+    +    +           
Sbjct: 5   QNGRLRVLSGIQPTADSFHLGNYLGALRQWVRLQDT-HETFYCVVDLHA----------- 52

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
             +   Q+ +  +E+ +   +  +  G     + +          +   +L     F   
Sbjct: 53  --ITVEQDPKVLLERTRRSAAQLLAIGVDPARSALFVQSHVPEHAQLSWVLECQTGFGEA 110

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RM  F+  ++  +     S   F Y +L A D + L +     +   G DQ  ++    
Sbjct: 111 GRMTQFKD-KAAKQGSDHASVGLFTYPVLMAADIL-LYQTNAVPV---GEDQRQHLELTR 165

Query: 211 DLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
           +L +R      K F +  P +   +           KM K+ S    L + +  P    +
Sbjct: 166 NLAQRFNSRFGKTFVMPEPFIVKDTAKIYDLQEPTAKMSKSASTGNGLIELLEDPKRSAK 225

Query: 260 YWRN 263
             R+
Sbjct: 226 KIRS 229


>gi|308804992|ref|XP_003079808.1| putative tryptophanyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058265|emb|CAL53454.1| putative tryptophanyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 481

 Score = 52.1 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 75/231 (32%), Gaps = 19/231 (8%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+          Y G   ++ SLH GHL       WLQ    K   ++            
Sbjct: 76  LNAYEKGERFYLYTGRGPSSESLHLGHLIPFHFTKWLQDA-FKVPLVI----------QL 124

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +  E++E     +      I  G       + ++ +++ +  Y ++++ I  
Sbjct: 125 TDDEKFLWKDLELEECERLARENAKDIIACGFDPKRTFIFSDVSYMSTPMYKNMMK-IAK 183

Query: 147 FFSVNR---MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             ++N+   +  F    +  +     +    ++     + F E   +  C +     DQ 
Sbjct: 184 CVTLNQVKGIFGFTGESNIGQVGFPPTQAAPSFPDCFPHMFGESKTSLRCLIPC-AIDQD 242

Query: 204 GNIICGIDLGERL-KTPKLFA--LTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                  D+  R+             P L   +G       + AI++    
Sbjct: 243 PYFRMTRDVAPRIGGYKPALIESRFFPALKGENGKMSASDATSAIYVTDTP 293


>gi|157136346|ref|XP_001663714.1| tryptophanyl-tRNA synthetase [Aedes aegypti]
 gi|108869987|gb|EAT34212.1| tryptophanyl-tRNA synthetase [Aedes aegypti]
          Length = 417

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    L+++ +      Y G   ++ S+H GHL   ++  WLQ+T   P
Sbjct: 72  LIRRGIFFSHRDLHTLLNMVEAGKKFYLYTGRGPSSESMHLGHLVPFIVTKWLQETFDVP 131

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   +++++   +      I  G       +  N  
Sbjct: 132 LVI-----------QLTDDEKTLWKDLTVEQSMRMARENAKDIIAIGFDVNKTFIFANLD 180

Query: 131 WLCS-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++     +   +  I    + N++             + + F         +  F  +  
Sbjct: 181 YMGRCSAFYQNIIRIQKCVTFNQVKGIFGFGDSDVIGK-IGFPAAQAAPAFSTTFPFIFG 239

Query: 190 NYDCRLQM-GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAI 245
           N    + +    DQ        D+  RL  PK   + +   P L  A         + AI
Sbjct: 240 NDKLPVLIPCAIDQDPYFRMTRDVSPRLGFPKPALIHSSFFPALQGAKTKMSASEDNSAI 299

Query: 246 WLNKEM 251
           +L    
Sbjct: 300 FLTDTP 305


>gi|222099153|ref|YP_002533721.1| Tryptophanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|281411713|ref|YP_003345792.1| tryptophanyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|221571543|gb|ACM22355.1| Tryptophanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|281372816|gb|ADA66378.1| tryptophanyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 328

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 87/309 (28%), Gaps = 31/309 (10%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   +     LQ+ G++    +    ++                 ++
Sbjct: 6   GMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHAL------------TTHYDDV 52

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
               E  + +   F+  G     +++          +   L   I S   + R+ +++ +
Sbjct: 53  SRLKEYTRDLVRGFLACGIDPEKSVVFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           +  L  +   +     Y +LQA D + + K     +   G DQ  +I    ++  R    
Sbjct: 113 KKELNYKDLSTAGFLIYPVLQAADIL-IYKAEGVPV---GEDQVYHIELTREIARRFNHL 168

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                  P       P L    G KM K+    I L                       +
Sbjct: 169 YAEVFPEPDAILSRVPKLPGTDGRKMSKSYGNIINLEISEVELERTILRMMT-----DPA 223

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             +R               Q  +I+E +     E  T         K          +  
Sbjct: 224 RVRRTDPGNPENCPVWKYHQAFDISEEESKWVWEGCTTARIGCVDCKKLLLKNMKKKLMP 283

Query: 332 HSQHMPTIS 340
             ++   I 
Sbjct: 284 IWENFSRID 292


>gi|303285224|ref|XP_003061902.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456313|gb|EEH53614.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 381

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 30/261 (11%)

Query: 2   PAFKSDF-LSILSE--RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQL 57
           P  +SD  L    E  R    +     EL  L  +  V   Y G++ +   +H      +
Sbjct: 27  PPLESDLTLDEKYELCRSVGEECIQEEELRNLLDKKPVPVCYDGFEPSGR-MHI--AQGV 83

Query: 58  MLLF---WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
           M       L K G      +    +++ +    D          +++  +  + +   + 
Sbjct: 84  MKCLNVNKLTKAGCHFKFWVADWFALMNNKMGGD----------LKKIQKVGQYMVEVWK 133

Query: 115 KYGTGKTDALMLNNETWLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
             G   +    + +   +     +Y  L+ +I     + R+L    +  R + +  L+  
Sbjct: 134 AVGMDLSRVEFIWSSEEINKRGHEYWPLVLDIARRNKLARILRCTQIMGRSETDD-LAAS 192

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---GERLKTPKLFALTSPLL 229
           +  Y ++Q  D   L       +   G DQ    +   +     +R   P + +    + 
Sbjct: 193 QIFYPVMQCADIFFLK----ADICQLGVDQRKVNMLAREYCDDIKRKMKPIILSHHMLMG 248

Query: 230 TTASGTKMGKTLSGAIWLNKE 250
                 KM K+   +    ++
Sbjct: 249 LKQGQEKMSKSDPESAIFMED 269


>gi|86140014|ref|ZP_01058578.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           MED193]
 gi|85823264|gb|EAQ43475.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           MED193]
          Length = 394

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             D    G  +  ++ +AG   S  EA R +    +K+N + I +  L +  +D  
Sbjct: 33  KGDSAPAGDRIAKVLSRAG-VASRREAERMIAEGRVKVNGTKIDSPALNVTERDRI 87


>gi|325130544|gb|EGC53297.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 336

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 84/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNLDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +  ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENNQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFREIFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|156543888|ref|XP_001606982.1| PREDICTED: similar to tryptophanyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 836

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 80/269 (29%), Gaps = 37/269 (13%)

Query: 6   SDFLSILSERGFIHQISNPRE------------------LDILCSQGVVTAYIGYDLTAS 47
           S     L  R    +I+  +                   L++         Y G   ++ 
Sbjct: 478 SKIDEELISR--FEKITGKKAHHFLRRGIVFSHRDMHTILNLYEQGKPFYLYTGRGPSSD 535

Query: 48  SLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
            +H GHL   M   WLQ+    P+ +              D+ + + ++ +I++ I+   
Sbjct: 536 CMHLGHLVPFMFCKWLQEVFDVPLVI-----------QLTDDEKAIWKNLKIEDAIKLSY 584

Query: 108 GIFSSFIKYGTGKTDALMLNNET-WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR- 165
                 I  G  K    + ++      +  +   +  I    + N++             
Sbjct: 585 ANAKDIIACGFRKDKTFIFSDLEHIGTNPAFYQNMIRIQKCVTFNQVKGIFGFGDSDPIA 644

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LF 222
           +      +    +   + F+   K   C +     DQ        D+  +L  PK   + 
Sbjct: 645 KIGFPPTQAAPALSSTFPFIFKNKKVPCLIPC-AIDQDPYFRMTRDVAPKLNHPKPALIH 703

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +   P L  +         + AI+L    
Sbjct: 704 STFFPALQGSKTKMSASDNNTAIFLTDTP 732


>gi|238062591|ref|ZP_04607300.1| tryptophanyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237884402|gb|EEP73230.1| tryptophanyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 341

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 76/245 (31%), Gaps = 39/245 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIG--DPSFRDE 89
               + G   TA S H G+      +     LQ T H     +    +I    DP     
Sbjct: 7   RPRVFSGIQPTADSFHLGNYLG--AVRHWVALQDT-HDAFYCVVDLHAITAGHDP----- 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
             +++R +      +               ++         W      +  +   G    
Sbjct: 59  --KVLRQRTRVAAAQLFAVGLDPERSTLFAQSQVPEHPQLAW-----VLGCITGFGEASR 111

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S+ +     S   F Y ILQA D + L + +   +   G DQ  ++   
Sbjct: 112 MTQFKD----KSQKQGSDRSSVGLFTYPILQAADIL-LYQAHAVPV---GEDQRQHLELS 163

Query: 210 IDLGERL--KTPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL  R   +  K F + +P +   +           KM K+ S    +   +  P    
Sbjct: 164 RDLAHRFNSQFGKTFVVPAPHIVKDTAKITDLQEPTAKMSKSSSSPTGIIDLLDDPARSA 223

Query: 259 QYWRN 263
           +  R+
Sbjct: 224 KKIRS 228


>gi|325134552|gb|EGC57196.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325205771|gb|ADZ01224.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 336

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 84/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   S  ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANSENNQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEIFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|240127955|ref|ZP_04740616.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268686348|ref|ZP_06153210.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626632|gb|EEZ59032.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 336

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +   + M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEQEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLADGLAWGEAKKLSAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                   S    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNALTSNPSQIEEIL-QAGAQKARKEARELL 323


>gi|154340804|ref|XP_001566355.1| tryptophanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063678|emb|CAM39863.1| putative tryptophanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 473

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 50/174 (28%), Gaps = 26/174 (14%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ S+H GHL   M   WLQ T   P
Sbjct: 131 FLRRGIFFSHRDLNLILDAYEKGEPFYLYTGRGPSSESMHIGHLIPFMFTKWLQDTFQVP 190

Query: 71  ISLMGGGTSIIGD---PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           + +       + D     F+D +   +     +             I +G       +  
Sbjct: 191 LVI------QLTDDEKFFFKDVTLEEIDKMTTEN--------LKDIIAFGFDPNLTFIF- 235

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
                    +  + +       V +  +   VR     +   +   + +  +QA
Sbjct: 236 -------RDFEYVGKMYRIVARVEKAYTASQVRGCFGFKMEDNCGRWMFPAIQA 282


>gi|63102455|gb|AAH95453.1| WARS protein [Homo sapiens]
          Length = 471

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 195

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   + +            I  G       + ++  ++  S  +   + +I 
Sbjct: 196 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 255

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM--- 197
              + N+      V+       S    + ++  +Q     +  F ++ ++    +Q    
Sbjct: 256 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDR-TDIQCLIP 308

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 309 CVIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 363


>gi|67468336|ref|XP_650212.1| tyrosyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56466798|gb|EAL44826.1| tyrosyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 369

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 79/259 (30%), Gaps = 24/259 (9%)

Query: 10  SILSER-----GFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQ-LMLLFW 62
             +  R     G + +     +L  L  +     AY G++ +   +H       ++    
Sbjct: 12  EEIEARITKLLGIVEECDTINDLRALFKEKSNFVAYNGFEPSGR-IHIAQAILTVLNANK 70

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           + + G      +    + +      D          + +     K     F   G  +  
Sbjct: 71  IHECGGLYKIYIADWFAQLNHKMGGD----------LSKIQVLGKYFIEVFKACGIQEGA 120

Query: 123 ALMLNNETWLCS-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           A  +     + +   Y  L+ +I +  +VNR+     +  R +++  LS  +  Y  +Q 
Sbjct: 121 AEFIWASDLIQNSKTYWPLVLDIATKNTVNRITRCSQIMGRDEKDA-LSTSQLFYPCMQC 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D  EL       +   G DQ    +   +    +       L+  +L    G K GK  
Sbjct: 180 ADIFEL----GADVCQLGLDQRKVNMLAREYAPTVNRKAPIILSHHMLMGLKGPKAGKMS 235

Query: 242 SGAIWLNKEMTSPYNFWQY 260
                    M   Y   + 
Sbjct: 236 KSIPDSAIFMDDSYEEIKR 254


>gi|308163294|gb|EFO65644.1| Tryptophanyl-tRNA synthetase [Giardia lamblia P15]
          Length = 432

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 50/173 (28%), Gaps = 13/173 (7%)

Query: 12  LSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG  +   +    L+       +  Y G   ++ +LH GHL   +   +LQ    K 
Sbjct: 45  MLRRGLFYAHRDFEEFLNYYEKGHPIYIYTGRGPSSGALHLGHLLPFIFTKYLQDA-FKC 103

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE-KIKGIFSSFIKYGTGKTDALMLNNE 129
             ++      I D     + + +         ++          I  G      L+  N 
Sbjct: 104 YVVI-----QITD-----DEKFLRNRGLSYTEVDAYTSENIKDIIACGFDPDKTLIFINS 153

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            +L           +     ++++ +     +      +    +    +   Y
Sbjct: 154 QYLGLKNRYRFSCLVDRMLPISQLRASFGFSNDANIGYAAFPPKQMLPVYSTY 206


>gi|239617256|ref|YP_002940578.1| tryptophanyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506087|gb|ACR79574.1| tryptophanyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 327

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 101/336 (30%), Gaps = 40/336 (11%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH G+LT L     LQ  G++    +    ++                        
Sbjct: 10  TGK-LHLGNLTALERWVELQNEGNECYFFVADWHAL------------TSHIDSTNNFAG 56

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               I   ++  G     +++          +   L   + S   + R+ +++  + ++ 
Sbjct: 57  WSLDIVKIYVAAGLDPEKSVIFIQSAVKEHAELFLLFSMLVSVSRLERIPTYKEQKQQIN 116

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLF 222
                S     Y +LQA D + + + +   +   G DQ  +I    ++  R      ++F
Sbjct: 117 DRDLSSAGFLLYPVLQAADIL-MYRAHGVPV---GEDQVYHIELTREIARRFNNLFGEVF 172

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
               P+L   +          +   N  +    +  Q W+ I         KR T     
Sbjct: 173 PEPEPILAKVAKLPGTDGRKMSKSYNNFIPIDTDEKQLWKMIAPMMTDPARKRRTDPGDP 232

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
           E          E ++A      E+  +V+G + A        +    ++ ++  P     
Sbjct: 233 EK-----CPVWEYHKAFTHSQEELDWVVNGCKTAGIGCIDCKKLLHKNLSAKLSPIWEKL 287

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           ++                      E ++ +K    K
Sbjct: 288 REFDKNPE----------------EVKKIIKEGNAK 307


>gi|164656196|ref|XP_001729226.1| hypothetical protein MGL_3693 [Malassezia globosa CBS 7966]
 gi|159103116|gb|EDP42012.1| hypothetical protein MGL_3693 [Malassezia globosa CBS 7966]
          Length = 358

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 72/233 (30%), Gaps = 21/233 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L     Q     Y G   +++S+H GHL   +   WLQ     P+ +             
Sbjct: 3   LTRYEQQKPFYLYTGRGPSSASMHLGHLIPFLFTKWLQDVFDVPLVI------------- 49

Query: 87  RDESRRMMRSQEIQENIEKIK----GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
              +       +    IE+++          I  G       + ++  ++    Y +++R
Sbjct: 50  -QLTDDEKFLFKYDLKIEQVQKFAFENARDIIACGFKLEKTFVFSDLDYVGGAFYHNIVR 108

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
                 +     +F    +    +     ++       ++  +   ++    L     DQ
Sbjct: 109 IARYITTNQSKGTFGFTDTDSVGKMHFVAIQAAPSFSNSFPQIYGTRSDVPCLIPCAIDQ 168

Query: 203 WGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                   D+  RLK PK   + +   P L  A         S +I+++    
Sbjct: 169 DPYFRQTRDVAVRLKYPKPSLIHSKFFPALQGAQTKMSASNESSSIFMHDTPN 221


>gi|296314091|ref|ZP_06864032.1| tryptophan--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839348|gb|EFH23286.1| tryptophan--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 336

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLADGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG   +  EAR  L
Sbjct: 291 REHYNELTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|326530374|dbj|BAJ97613.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + LD+         Y G   ++ SLH GHL   M   +LQ     P
Sbjct: 73  FLRRGIFFAHRDLNQILDLYEQGEKFYLYTGRGPSSESLHLGHLVPFMFTKYLQDAFKVP 132

Query: 71  ISL 73
           + +
Sbjct: 133 VVI 135


>gi|326505538|dbj|BAJ95440.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + LD+         Y G   ++ SLH GHL   M   +LQ     P
Sbjct: 73  FLRRGIFFAHRDLNQILDLYEQGEKFYLYTGRGPSSESLHLGHLVPFMFTKYLQDAFKVP 132

Query: 71  ISL 73
           + +
Sbjct: 133 VVI 135


>gi|326526043|dbj|BAJ93198.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 402

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  E+  L  +G     Y G   ++ +LH GHL   M   +LQ     P
Sbjct: 64  FLRRGLFFAHRDLNEILDLFEKGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVP 123

Query: 71  ISL 73
           + +
Sbjct: 124 LVI 126


>gi|319410713|emb|CBY91095.1| tryptophanyl-tRNA synthetase (tryptophan-tRNA ligase; TrpRS)
           [Neisseria meningitidis WUE 2594]
          Length = 336

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +  ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENNQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNYRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                   +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNALTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|119963213|ref|YP_947022.1| tryptophanyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119950072|gb|ABM08983.1| tryptophanyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 374

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 76/247 (30%), Gaps = 31/247 (12%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
            L          G   +A SLH G+    L+    +Q   +  +  +    +        
Sbjct: 26  KLAVGAKHRVLSGMQPSADSLHLGNYLGALVNWVRMQDE-YDAVYFIPDLHA-------- 76

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                +   Q+  E   + +   + +I  G       +          +   +L  I   
Sbjct: 77  -----ITVPQDPAELARRTRVTAAQYIAGGVDVNKCTLFVQSQVPEHAQLAWVLNCITGM 131

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
               RM  F+  +++ +     S   F Y ILQA D + L + +   +   G DQ  ++ 
Sbjct: 132 GEAARMTQFKD-KAQKQGSDHASVGLFTYPILQAADIL-LYQPHGVPV---GEDQRQHVE 186

Query: 208 CGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYN 256
              DL  R      + F +    +   S           KM K+      L   +  P  
Sbjct: 187 LSRDLANRFNSRFGETFQVPEAFIQKESAKIYDLQNPTAKMSKSAESPAGLINLLDDPKT 246

Query: 257 FWQYWRN 263
             +  ++
Sbjct: 247 VAKRIKS 253


>gi|123444741|ref|XP_001311138.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121892936|gb|EAX98208.1| hypothetical protein TVAG_263250 [Trichomonas vaginalis G3]
          Length = 346

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 79/253 (31%), Gaps = 20/253 (7%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPIS 72
           R     I     ++ L  +     AY G++ +   +H    L   +    + K G   + 
Sbjct: 14  RSIAEDIQGNERIEELLEKKPNFRAYNGFEPSGR-MHIAQALVTAINCNAITKAGGTMVL 72

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            +    + +      D          +++  +  +     F   G       ++    ++
Sbjct: 73  YIADLFAQLNHKMGGD----------MKKIHDVGRYFVEVFKACGMDLDHVEIIWTADFI 122

Query: 133 --CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                +Y +L+ +I SF +++R+               LS  +  Y  +QA D   L   
Sbjct: 123 KEHQREYFELVHDISSFATLSRI-KRTVTAMGRTEGDKLSLSQLLYPCMQATDVFML--- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            D  +   G DQ    +  I+    +K P    L+  +L    G     + S  +     
Sbjct: 179 -DVDICQLGVDQRKVNMLAIEYANHVKRPSPIILSHHMLMGLKGKAHKMSKSDPMSAIFI 237

Query: 251 MTSPYNFWQYWRN 263
                   +   N
Sbjct: 238 EDEKDRIVEKMMN 250


>gi|325204457|gb|ADY99910.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 336

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 84/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNLDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              +        ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLNPEQTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEIFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|80477042|gb|AAI08785.1| Unknown (protein for MGC:132108) [Xenopus laevis]
          Length = 475

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 75/234 (32%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD    +     Y G   ++ ++H GHL   +   WLQ+  + P+ +             
Sbjct: 152 LDAYEKKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQEVFNVPLVV-----------QL 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIG 145
            D+ + + +   +++  +         I  G       + ++  ++     +   + ++ 
Sbjct: 201 TDDEKYLWKDLTLEKAYQYATENAKDIIACGFDVNKTFIFSDLEYMGKSPGFYQNVVKVQ 260

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AYDFVELAKNYDCRLQMG 198
              + N+      V+       S    + ++  +Q       ++  +   +     L   
Sbjct: 261 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPEIFKGRKDIQCLIPC 314

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 315 AIDQDPYFRMTRDVAPRINYPKPALMHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|327280318|ref|XP_003224899.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 473

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 78/236 (33%), Gaps = 28/236 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 150 LDTYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QL 198

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYIDLLREIG 145
            D+ + + +   I++  +         I  G       + ++  +L  S  +   + ++ 
Sbjct: 199 TDDEKYLWKDLTIEKAYQYAIENIKDVIACGFDINKTFIFSDLHYLGLSPGFYKNIVKVQ 258

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYD--CRLQMG 198
              + N+      V+       S    + ++  +Q     +  F  +  N D    L   
Sbjct: 259 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPHIFNNRDDIQCLIPC 312

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
             DQ        D+  R+  PK     ++  P L  A         + +I+L    
Sbjct: 313 AIDQDPYFRMTRDVAPRIGYPKPALLHSVFFPALQGAQTKMSASDPNSSIFLTDTP 368


>gi|255578670|ref|XP_002530195.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
 gi|223530288|gb|EEF32185.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
          Length = 405

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 11  ILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +   RG      +    LD          Y G   ++ SLH GHL   M   +LQ+    
Sbjct: 66  VFLRRGVFFAHRDFNDILDAFEKGKQFYLYTGRGPSSESLHLGHLVPFMFTKYLQEAFRV 125

Query: 70  PISL 73
           P+ +
Sbjct: 126 PLVI 129


>gi|145473805|ref|XP_001462566.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430406|emb|CAK95193.1| unnamed protein product [Paramecium tetraurelia]
          Length = 400

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 79/252 (31%), Gaps = 22/252 (8%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            ++ +  EL  L         Y G++ +   +H   G L + + +  L   G   I  + 
Sbjct: 63  EELIHKDELINLLKNKTFPICYDGFEPSGR-MHIAQG-LLRALNVNRLVDAGCIFIFWVA 120

Query: 76  GGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
              +++ +    D    + +    I+             +K+     +     N+ WL  
Sbjct: 121 DWFALLNNKMGGDLNKIKNVGRYFIEVWKAAGMK--MHNVKFLWASDEINKRPNDYWLRV 178

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +        +       +++         +++  ++  +  Y  +Q  D   L    +  
Sbjct: 179 LDLARKF-NVSRIKRCGQIMGRND----DEQDDKMAVAQLFYPCMQCNDIFFL----EAD 229

Query: 195 LQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWLNKEM 251
           +   G DQ    +   +  ++     K   ++  ++        KM K+   +    +  
Sbjct: 230 ICQLGMDQRKVNMLAREYADKSTDAYKPIIMSHHMMMGLLEGQAKMSKSDLNSAIFME-- 287

Query: 252 TSPYNFWQYWRN 263
            S  +  +  + 
Sbjct: 288 DSAEDVKRKIKC 299


>gi|313668137|ref|YP_004048421.1| tryptophanyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005599|emb|CBN87036.1| tryptophanyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 336

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANTENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|240014357|ref|ZP_04721270.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016790|ref|ZP_04723330.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121919|ref|ZP_04734881.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 336

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +   + M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEQEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLADGLAWGEAKKLSAAKINAELAEL 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                   S    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNALTSNPSQIEEIL-QAGAQKARKEARELL 323


>gi|226509036|ref|NP_001148699.1| tyrosyl-tRNA synthetase [Zea mays]
 gi|195621482|gb|ACG32571.1| tyrosyl-tRNA synthetase [Zea mays]
          Length = 380

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 80/246 (32%), Gaps = 27/246 (10%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L     V   Y G++ +   +H   G + + + +  +   G K  
Sbjct: 42  RGIGEECIQEDELRRLLENKPVPICYDGFEPSGR-MHIAQG-VVKTINVNKMVSAGCKVK 99

Query: 72  SLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             +    + + +    D +  + +    I+                G        L +  
Sbjct: 100 IWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAA-----------GMNLDGVEFLWSSE 148

Query: 131 WLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +     +Y  ++ +I    +V R++    +  R  ++  L+  +  Y  +Q  D   L 
Sbjct: 149 EINKRAHEYWPIVMDIARKNNVKRIMRCCQIMGRSDQDD-LTAAQIFYPCMQCADIFFLK 207

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAI 245
                 +   G DQ    +   +  + +K   K   L+  +L        KM K+   + 
Sbjct: 208 ----ADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGFKEGQEKMSKSDPSSA 263

Query: 246 WLNKEM 251
              ++ 
Sbjct: 264 IFMEDD 269


>gi|167515876|ref|XP_001742279.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778903|gb|EDQ92517.1| predicted protein [Monosiga brevicollis MX1]
          Length = 501

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
             Q     Y G   T    H  +   +  +    + G +   L+    + +         
Sbjct: 1   LKQRDAKIYWGTATTGKP-HLAYFVPMSKISDFLRAGCEVTILLADLHAYL--------D 51

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                 + ++  +E  K + ++ ++  G        +   ++  S KY     ++ +  S
Sbjct: 52  NMKAPWELLKLRVEYYKEVVTAMLESIGVPVDKLKFVIGTSYQLSEKYTLDGMKLFTMCS 111

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +  +   +   +      LS     Y + Q  D   L     C  Q GG DQ    +  
Sbjct: 112 QHDAVKAGAEVVKQSASPPLS--GLIYPVYQWLDEEYL----GCDAQFGGVDQRKIFMSA 165

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                +L   +   L + ++   +G KM  +          +  P    +  R +
Sbjct: 166 EKYLPKLGYKERCHLMNVMVPGLTGDKMSSSDID--SKIDLLDPPNAVKKKIRKV 218


>gi|126727512|ref|ZP_01743346.1| RNA pseudouridylate synthase family protein [Rhodobacterales
           bacterium HTCC2150]
 gi|126703292|gb|EBA02391.1| RNA pseudouridylate synthase family protein [Rhodobacterales
           bacterium HTCC2150]
          Length = 259

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           D   +G  +  ++ +AG A S  EA R +++  + +N  +I +  L +  +D   
Sbjct: 3   DTPEKGDRIAKVLSRAGIA-SRREAERMIEAGRVSVNGKVIPSPALNVTPKDKIK 56


>gi|225075317|ref|ZP_03718516.1| hypothetical protein NEIFLAOT_00320 [Neisseria flavescens
           NRL30031/H210]
 gi|224953492|gb|EEG34701.1| hypothetical protein NEIFLAOT_00320 [Neisseria flavescens
           NRL30031/H210]
          Length = 336

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 85/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q +  +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAIRAAQDSNTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              +        ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLNPEQTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANTENGQEDPDH 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    ++Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLYSYPILMTADILMF----NAHEVPVGRDQIQHVEMARDIAGRFNHRFKELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLGAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  ++   +  ++  AG   +  EAR  L
Sbjct: 291 RERYNELTAKPSQIEDIL-HAGAQKARKEARELL 323


>gi|126735086|ref|ZP_01750832.1| RNA pseudouridylate synthase family protein [Roseobacter sp. CCS2]
 gi|126715641|gb|EBA12506.1| RNA pseudouridylate synthase family protein [Roseobacter sp. CCS2]
          Length = 267

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +S +    G  +  ++ +AG A S  EA R ++   + +N   I++  L +   D  
Sbjct: 1   MSNETPPPGDRIAKVLSRAGIA-SRREAERMIEDGRVSVNGKTITSPALNVTADDRI 56


>gi|59801417|ref|YP_208129.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|194098308|ref|YP_002001366.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|239998725|ref|ZP_04718649.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240112654|ref|ZP_04727144.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240115400|ref|ZP_04729462.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240123251|ref|ZP_04736207.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240125503|ref|ZP_04738389.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|260440791|ref|ZP_05794607.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268594574|ref|ZP_06128741.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268598721|ref|ZP_06132888.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268601079|ref|ZP_06135246.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268681878|ref|ZP_06148740.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268684093|ref|ZP_06150955.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|291044105|ref|ZP_06569821.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|59718312|gb|AAW89717.1| putative tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA
           1090]
 gi|193933598|gb|ACF29422.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|268547963|gb|EEZ43381.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268582852|gb|EEZ47528.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268585210|gb|EEZ49886.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268622162|gb|EEZ54562.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268624377|gb|EEZ56777.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|291012568|gb|EFE04557.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|317164016|gb|ADV07557.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 336

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +   + M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEQEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLADGLAWGEAKKLSAAKINAELAEL 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                   S    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNALTSNPSQIEEIL-QAGAQKARKEARELL 323


>gi|316966763|gb|EFV51304.1| tryptophan--tRNA ligase [Trichinella spiralis]
          Length = 420

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 79/251 (31%), Gaps = 27/251 (10%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG         + LD          Y G   ++S++H GHL   +   +LQ+    P
Sbjct: 72  LLRRGVFFAHRELDKILDSYEKGNPFYLYTGRGPSSSAMHLGHLIPFLFTKYLQEAFDVP 131

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   ++E ++         I  G       +     
Sbjct: 132 LVI-----------QLTDDEKFLWKDLTVEEAMQMAYENIKDIIAIGFDPEKTFIF--AD 178

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AYD 183
           +              +   V R +++  VR       S S  +  +   +       ++ 
Sbjct: 179 F---QYIGQCAEFYQNMLRVQRNVTYNQVRGIFGFTDSDSIGKIVFPATEVAPCFSSSFP 235

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT 240
           F+   +     L     DQ      G D+  +L  PK   +++   P L  A        
Sbjct: 236 FIFNRRTDIPCLIPCAIDQDPYFRMGRDIAPKLNYPKPSLIYSTFIPALQGACSKMSASD 295

Query: 241 LSGAIWLNKEM 251
            + +I+L+   
Sbjct: 296 PNSSIFLSDTP 306


>gi|294941734|ref|XP_002783213.1| IFP53, putative [Perkinsus marinus ATCC 50983]
 gi|239895628|gb|EER15009.1| IFP53, putative [Perkinsus marinus ATCC 50983]
          Length = 1378

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 88/328 (26%), Gaps = 39/328 (11%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ SLH GHL       WLQ T   P
Sbjct: 263 FLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVP 322

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE         ++E            I  G       + ++  
Sbjct: 323 LVI------QLTD----DEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLD 372

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++ ++     + +I    + N+         S    + S   ++ +      +  +   +
Sbjct: 373 YMGTMYPN--VCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQASPSFSTTFPSIFGDR 430

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---------------------FALTSPL 228
                L     DQ        D+  R+   K                         T+ +
Sbjct: 431 KDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHKTKMSGSVGNTTIM 490

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMSEIDR 286
           +T +      K        +    S     +Y  N++      + + +        +I  
Sbjct: 491 VTDSKKEI--KNKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYVMEDDEKFKQIGE 548

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGRE 314
                     E K I+  E+  +    +
Sbjct: 549 DYSSGKLLTGEVKNILVEELVNLTKAHQ 576


>gi|294871822|ref|XP_002766059.1| IFP53, putative [Perkinsus marinus ATCC 50983]
 gi|239866624|gb|EEQ98776.1| IFP53, putative [Perkinsus marinus ATCC 50983]
          Length = 1254

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 88/328 (26%), Gaps = 39/328 (11%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ SLH GHL       WLQ T   P
Sbjct: 247 FLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVP 306

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE         ++E            I  G       + ++  
Sbjct: 307 LVI------QLTD----DEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLD 356

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++ ++     + +I    + N+         S    + S   ++ +      +  +   +
Sbjct: 357 YMGTMYPN--VCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQASPSFSTTFPSIFGDR 414

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---------------------FALTSPL 228
                L     DQ        D+  R+   K                         T+ +
Sbjct: 415 KDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALRGHKTKMSGSVGNTTIM 474

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMSEIDR 286
           +T +      K        +    S     +Y  N++      + + +        +I  
Sbjct: 475 VTDSKKEI--KNKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYVMEDDEKFKQIGE 532

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGRE 314
                     E K I+  E+  +    +
Sbjct: 533 DYSSGKLLTGEVKNILVEELVNLTKAHQ 560


>gi|302786552|ref|XP_002975047.1| hypothetical protein SELMODRAFT_102976 [Selaginella moellendorffii]
 gi|300157206|gb|EFJ23832.1| hypothetical protein SELMODRAFT_102976 [Selaginella moellendorffii]
          Length = 395

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
               RG      +  + LD          Y G   ++ +LH GHL   M   +LQ     
Sbjct: 50  TFLRRGVFFAHRDFEKVLDSYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKV 109

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           P+ +              D+ + M ++  ++E     +      I  G   +   + ++ 
Sbjct: 110 PLVI-----------QLTDDEKCMWKNLSVEETKRLARENAKDIIACGFDISRTFIFSDF 158

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA- 188
            ++    Y +++       ++ + ++F  V+     +      +  +  +QA      + 
Sbjct: 159 QYVGRGFYENMI-------TIAKSVTFNQVKGIFGFDGESHIGKIFFPAVQAAPSFPTSF 211

Query: 189 ------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGK 239
                 K+    L     DQ        D+  RL   K   + +   P L   SG     
Sbjct: 212 PHLFGTKSKIKCLIPCAIDQDPYFRMTRDVAPRLGYQKPALIESRFFPALQGESGKMSAS 271

Query: 240 TLSGAIWLNKEM 251
             + AI++    
Sbjct: 272 DTNSAIYVKDTQ 283


>gi|257440171|ref|ZP_05615926.1| tryptophan--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197523|gb|EEU95807.1| tryptophan--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 353

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 70/238 (29%), Gaps = 39/238 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKERVRLQNTGKFDEIYIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G       +        L  + +  +     S    N  +  E 
Sbjct: 61  QNI---LQVALDYLACGLDPNKVHIFIQSMVPQLTELSFYYMNLVTVSRLQRNPTVKSEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   +    ++  +   
Sbjct: 118 QMRNFETSIPVGF--FTYPISQAADITAF----GATTVPAGEDQMPMLEQCREIVHKFNA 171

Query: 219 PKLFALTSPLLTT------------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                LT P +                  KM K+L   I+L+     P +  +   ++
Sbjct: 172 VYGETLTMPEIMLPQNAACLRLPGIDGKAKMSKSLGNCIYLS---DEPEDIKKKIMSM 226


>gi|85100099|ref|XP_960902.1| tryptophanyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28922433|gb|EAA31666.1| tryptophanyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28950279|emb|CAD71247.1| probable tryptophan--tRNA ligase [Neurospora crassa]
          Length = 491

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 45/145 (31%), Gaps = 12/145 (8%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG +    +    LD          Y G   ++ S+H GH        WLQ T   P
Sbjct: 80  FLRRGIVFSHRDLELILDRYEKGEPFYLYTGRGPSSDSVHVGHTIPFEFTKWLQDTFDVP 139

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +M             D+ + +   +   E +E      +  I       +   + ++ 
Sbjct: 140 LVIM-----------MTDDEKYLFSDKRTIEEVEGYCSNNAKDIIAVGFDPNKTFIFSDF 188

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS 155
                 +   +  +    ++N+  +
Sbjct: 189 QYMGGAFYKNVVRLSKHITLNQARA 213


>gi|296168847|ref|ZP_06850519.1| tryptophan--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896464|gb|EFG76114.1| tryptophan--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 339

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 77/246 (31%), Gaps = 35/246 (14%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
           + G    + G   T+ SLH G+    +     LQ   H+P   +    + I  P      
Sbjct: 4   ATGSRRIFSGVQPTSDSLHLGNALGAITQWVELQD-DHEPFFCVVDLHA-ITIPQDPAAL 61

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           RR      +    + +             ++     +   W            +G F   
Sbjct: 62  RRR----TLVTAAQYLALGIDPARSTVFVQSHVPAHSQLAW-----------VLGCFTGF 106

Query: 151 NRMLSFESVRSRLKREQSLSFLE--FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            +       + +  R+   S     F Y +LQA D +     YD  L   G DQ  ++  
Sbjct: 107 GQASRMTQFKDKSARQGGDSTTVGLFTYPVLQAADVLA----YDAELVPVGEDQRQHLEL 162

Query: 209 GIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNF 257
             D+ +R     P  F +   L+  A+           KM K+ +    L   +  P   
Sbjct: 163 ARDVAQRFNSRFPDTFVVPDLLIPKATAKIYDLADPTSKMSKSAATDAGLINLLDDPAAS 222

Query: 258 WQYWRN 263
            +  R+
Sbjct: 223 AKKIRS 228


>gi|288931952|ref|YP_003436012.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642]
 gi|288894200|gb|ADC65737.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642]
          Length = 208

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK- 408
           M L   + K+G+  S ++A+  +K   +K+N  +I+    Q+K  +           GK 
Sbjct: 1   MRLDEFLKKSGYFKSRSQAKEAIKRGFVKVNGKVITKPSFQVKGSEKIEVAE----KGKP 56

Query: 409 KNHIICH 415
           + +    
Sbjct: 57  RGYYKLK 63


>gi|237836259|ref|XP_002367427.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965091|gb|EEB00287.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221485060|gb|EEE23350.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221505883|gb|EEE31518.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 427

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 73/244 (29%), Gaps = 27/244 (11%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +   P EL  L  +      Y G++ +   +H   G L ++  +  L K G   +  + 
Sbjct: 93  QECIQPDELRTLLEKKPFPLCYDGFEPSGR-MHVAQG-LLKVTNVNKLTKAGCVFVFWVA 150

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ +   +         +  +  IE  K         G    +   L     +   
Sbjct: 151 DWFAMLNN---KMNGDLKKIQKVGEYFIEVWKA-------AGMDMQNVRFLWASEEINRN 200

Query: 136 KYIDLLREIGSFFSVNRMLSFESVR---SRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                ++ +    S          +    +   EQ     +  Y  +Q  D   L     
Sbjct: 201 SDQYWVQVMQIARSFTITRVKRCSQIMGRQEGDEQPA--AQIMYPCMQCADIFYL----G 254

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWLNK 249
             +   G DQ    +   +  + +K   K   L+  +L        KM K+   +    +
Sbjct: 255 ADICQLGMDQRKVNMLAREYCDEIKRKLKPVILSHQMLPGLLEGQEKMSKSNPDSAIFME 314

Query: 250 EMTS 253
           +  +
Sbjct: 315 DTET 318


>gi|55438|emb|CAA49348.1| tryptophan--tRNA ligase [Mus musculus]
          Length = 481

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 67/230 (29%), Gaps = 20/230 (8%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WL+   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLEDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM---GGSDQ 202
              + N++                S            +           +Q       DQ
Sbjct: 260 KHVTFNQV--KGIFGFTDSDCIGKSSFPAVQAAPSFSNSFPKIFRDRTDIQCLIPCAIDQ 317

Query: 203 WGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
                   D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 318 DPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|196007400|ref|XP_002113566.1| hypothetical protein TRIADDRAFT_50361 [Trichoplax adhaerens]
 gi|190583970|gb|EDV24040.1| hypothetical protein TRIADDRAFT_50361 [Trichoplax adhaerens]
          Length = 406

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 84/264 (31%), Gaps = 34/264 (12%)

Query: 11  ILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   RG      + RELD +     ++     Y G   ++ +LH GHL   +   WLQ+ 
Sbjct: 66  VFLRRGLFF---SHRELDQILTLHENKKPFYLYTGRGPSSGALHIGHLIPFLFTKWLQEA 122

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              P+ +              D+ + + R   + E  +         +  G       + 
Sbjct: 123 FDVPLIV-----------QMTDDEKFLWRDISLDELEKITISNIKDILACGFDIEKTFIF 171

Query: 127 NNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++   +  S  +   + ++    + N+      V+      +S +  + ++  +QA    
Sbjct: 172 SDLDIMAQSRAFNRTVLKVRKCITFNQ------VKGIFGFGESDNIGKISFPAIQATPSF 225

Query: 186 ELA--------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
             +        KN  C +     DQ        D+  RL   K   + S  L    G + 
Sbjct: 226 SASFPQIFGNAKNVKCLIPC-AIDQDPYFRMTRDVAPRLGFVKPALIHSQFLPALQGAQT 284

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYW 261
             + S          +P    +  
Sbjct: 285 KMSASDLNSSIYLSDTPNMIKKKI 308


>gi|326475803|gb|EGD99812.1| tryptophanyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 434

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 74/253 (29%), Gaps = 23/253 (9%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GH   L    WLQ     P+ +
Sbjct: 80  RGLFFSHRDFDKILDKYEKGEPFFLYTGRGPSSDALHLGHTIPLTFTKWLQDVFDVPLVI 139

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 ++ D    DE          +E  +         I  G       + ++  ++ 
Sbjct: 140 ------MLTD----DEKALFKEKLTFEETHKFALQNAKDIIACGFDLKKTFIYSDLEYIK 189

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
                ++          +++L+F  VR      +S +     +  +Q             
Sbjct: 190 GPFLTNVWE-------FSKLLTFNQVRGAFGFNESTNIGRIMFPAVQCEKPATARTKAMA 242

Query: 194 RLQM---GGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           ++Q       DQ        +   R++   PK   + S  LT   G     + S      
Sbjct: 243 KIQCLIPMAIDQDPYFRLLREKCHRMRFPSPKPALIHSQFLTALQGAGGKMSASDPNSAI 302

Query: 249 KEMTSPYNFWQYW 261
               +P    +  
Sbjct: 303 FMSDTPNQIKKKI 315


>gi|55436|emb|CAA49347.1| tryptophan--tRNA ligase [Mus musculus]
          Length = 475

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 67/230 (29%), Gaps = 20/230 (8%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WL+   + P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLEDVFNVPLVI-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            I  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM---GGSDQ 202
              + N++                S            +           +Q       DQ
Sbjct: 260 KHVTFNQV--KGIFGFTDSDCIGKSSFPAVQAAPSFSNSFPKIFRDRTDIQCLIPCAIDQ 317

Query: 203 WGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
                   D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 318 DPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|168007324|ref|XP_001756358.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692397|gb|EDQ78754.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 397

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              R       +  + LD          Y G   ++ SLH GHL   M   +LQ     P
Sbjct: 57  FLRRNVFFAHRDFDKILDSYEKGEKFYLYTGRGPSSESLHLGHLVPFMFTKYLQDAFKVP 116

Query: 71  ISL 73
           + +
Sbjct: 117 LVI 119


>gi|293399275|ref|ZP_06643440.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291610689|gb|EFF39799.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 336

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +   + M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEQEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQMLADGLAWGEAKKLLAAKINAELAEL 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                   S    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNALTSNPSQIEEIL-QAGAQKARKEARELL 323


>gi|154334377|ref|XP_001563440.1| tyrosyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060456|emb|CAM37626.1| putative tyrosyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 685

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/376 (12%), Positives = 107/376 (28%), Gaps = 40/376 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L  +   +  Y G++ +   +H          +         G +
Sbjct: 11  RSVGEECIQDAELRSLIERKPAIRCYDGFEPSGR-MHIAQGIFKAVNVNKCTT---AGCE 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    +++ D                +  IE  K       K     +   + N  
Sbjct: 67  FVFWVADWFALMNDKVG---GELEKIRIVGRYLIEVWKAAGMDMDKVVFLWSSEEITN-- 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
               +  Y   + ++G   ++ R+    ++  + +    L+  +  Y ++Q  D   L  
Sbjct: 122 ---HAGTYWRTVLDVGRQNTIARIKKCCTIMGKTEGT--LTAAQVLYPLMQCTDIFFLK- 175

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                +   G DQ    +   +  + +    K   L+  +L      +   + S      
Sbjct: 176 ---ADICQLGLDQRKVNMLAREYCDFIGRKLKPVILSHHMLAGLKQGQAKMSKSDPDSAI 232

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               +  +  +  R      V   A  +T       D  A +   + N         +  
Sbjct: 233 FMEDTEEDVTRKIRQAYCPRVKQSANVIT-------DDGAPVATDDRNPVLDYFQCVVYA 285

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
                   + A  A  E  + +  S  +  +++    +     LL  + +     S  EA
Sbjct: 286 RPGAVATIDGATYATYEDLEQAFVSDKVSEVALKSCLIDEVNALLAPVRQH--FASNPEA 343

Query: 369 RRHL-------KSNAI 377
              L       K  A+
Sbjct: 344 HELLETVKSYRKDGAV 359


>gi|159111323|ref|XP_001705893.1| Tyrosyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433984|gb|EDO78219.1| Tyrosyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 387

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 79/253 (31%), Gaps = 27/253 (10%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCS---QGVVTAYIGYDLTASSLHA--GHLTQ 56
           PA K   L  L+E      I  P EL  L        +T Y G++ +   +H   G    
Sbjct: 12  PAQKQHLLEKLAE-----DIMCPEELHALLHADGNKRLTCYDGFEPSGR-IHIAQGIAKA 65

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIK 115
           + +   L ++G   +  +    + + +    +    +++    ++          S  + 
Sbjct: 66  INV-NRLLRSGIDCVFYVADWFAALNNKCDAELSKIQILGRYFVEVWKACGMLGVSKPVV 124

Query: 116 YGTGKTD-ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES---VRSRLKREQSLSF 171
           + TG+      +    ++        +R +    S            +      +Q +S 
Sbjct: 125 FSTGQKASVRFVWASEFIRQNSSSYWMRVMNIARSFTVPRMQRCSTIMGRTEGDDQPIS- 183

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER----LKTPKLFALTSP 227
            +  Y  +Q  D  EL       L   G DQ        D  ++         +  +   
Sbjct: 184 -QILYPSMQCADIFELK----LDLVEMGLDQRKVNALARDYCDKSVELRHHKPVILMHHM 238

Query: 228 LLTTASGTKMGKT 240
           LL      KM K+
Sbjct: 239 LLGLVGDGKMSKS 251


>gi|154310453|ref|XP_001554558.1| hypothetical protein BC1G_07147 [Botryotinia fuckeliana B05.10]
 gi|150851478|gb|EDN26671.1| hypothetical protein BC1G_07147 [Botryotinia fuckeliana B05.10]
          Length = 474

 Score = 50.9 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 63/255 (24%), Gaps = 15/255 (5%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG +    +    LD          Y G   ++ S+H GH        WLQ     P
Sbjct: 74  FMRRGIVFSHRDLHLMLDRHERGEPFFMYTGRGPSSDSMHIGHTVPFEFTKWLQDVFDVP 133

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +      ++ D    DE       + I+E            I  G       + ++  
Sbjct: 134 LII------MLTD----DEKYIFSEKRTIKEVQSYTTSNAKDIIAVGFDPKKTFIFSDYE 183

Query: 131 WLCSIKYIDLL----REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++    Y ++         +        +  S   ++          F       +   E
Sbjct: 184 YMGGPFYKNVTRISKHVTLNVARAVFGFNESSCIGKIHFGAVQGATSFANSFPHIFGTDE 243

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
                   L     DQ        D+  RL   K   + +  L    G     + S    
Sbjct: 244 SKTTQIPSLIPCAIDQDPYFRMTRDVAARLHYAKPALIHARFLDALQGPGSKMSASVDTS 303

Query: 247 LNKEMTSPYNFWQYW 261
                  P       
Sbjct: 304 AIFMYDEPNKIKNKI 318


>gi|148227956|ref|NP_001080533.1| tryptophanyl-tRNA synthetase [Xenopus laevis]
 gi|28302309|gb|AAH46713.1| Wars-prov protein [Xenopus laevis]
          Length = 475

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 74/233 (31%), Gaps = 26/233 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD    +     Y G   ++ ++H GHL   +   WLQ+  + P+ +             
Sbjct: 152 LDAYEKKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQEVFNVPLVV-----------QL 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   +++  +         I  G       + ++  ++             +
Sbjct: 201 TDDEKYLWKDLTLEKAYQYATENAKDIIACGFDVNKTFIFSDLEYMGK-----SSGFYQN 255

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVELAKNYDCRLQMGG 199
              V + ++F  V+       S    + ++  +QA       +  +   +     L    
Sbjct: 256 VVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPEIFKGRKDIQCLIPCA 315

Query: 200 SDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
            DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 316 IDQDPYFRMTRDVAPRINYPKPALMHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|226531027|ref|NP_001148802.1| LOC100282419 [Zea mays]
 gi|195622252|gb|ACG32956.1| tryptophanyl-tRNA synthetase [Zea mays]
          Length = 408

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 83/243 (34%), Gaps = 17/243 (6%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  E LD+  +      Y G   ++ +LH GHL   M   +LQ+   K 
Sbjct: 70  FLRRGLFFAHRDLNEILDLYENGQKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEA-FKV 128

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++             D+ + + ++  IQE+    +      I  G       + ++ +
Sbjct: 129 PLVI----------QLTDDEKYLWKNLTIQESKRLARENAKDIIACGFDIERTFIFSDFS 178

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAK 189
           ++    Y +++ ++    ++N+ +            + S   ++       ++  +   K
Sbjct: 179 FVGGAFYENMM-QVARCVTMNKAIGIFGFNLEDHIRKVSFPPVQAVPSFPSSFPHLFAGK 237

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIW 246
           +    L     DQ        D+  R+   K   + +   P L   +        + AI+
Sbjct: 238 DQLRCLIPCAIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQGENTKMSASDANSAIY 297

Query: 247 LNK 249
           +  
Sbjct: 298 VTD 300


>gi|300707212|ref|XP_002995824.1| hypothetical protein NCER_101183 [Nosema ceranae BRL01]
 gi|239605045|gb|EEQ82153.1| hypothetical protein NCER_101183 [Nosema ceranae BRL01]
          Length = 388

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R  +    +   L           Y G   ++ S+H GH+    L  + Q T + P+ +
Sbjct: 65  RNIVFAHRDFDILLEKLKSKSFYLYTGRGPSSKSMHLGHVIPFQLCKYFQDTFNCPLVI 123


>gi|218200930|gb|EEC83357.1| hypothetical protein OsI_28763 [Oryza sativa Indica Group]
 gi|222623167|gb|EEE57299.1| hypothetical protein OsJ_07374 [Oryza sativa Japonica Group]
          Length = 380

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 29/247 (11%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           RG   +     EL  L  +  V   Y G++ +   +H          +  +      G K
Sbjct: 42  RGIGEECIQEDELMNLLQKKPVPICYDGFEPSGR-MHIAQGIVKTINVNKMVR---AGCK 97

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    + + +    D          +++     + +   +   G        L + 
Sbjct: 98  VKIWIADWFAQLNNKMGGD----------LKKIQTVGRYMIEIWRAAGMNLDGVEFLWSS 147

Query: 130 TWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             + +   +Y  L+ +I    +V R++    +  R   ++ L+  +  Y  +Q  D   L
Sbjct: 148 EEINNRANEYWPLVMDIACKNNVKRIMRCCQIMGRNDSDE-LTAAQIFYPCMQCADIFFL 206

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLT--TASGTKMGKTLSGA 244
                  +   G DQ    +   +    +K   K   L+  +L        KM K+   +
Sbjct: 207 K----ADICQLGMDQRKVNVLAREYCTDIKRKNKPIILSHHMLPGFKEGQEKMSKSDPSS 262

Query: 245 IWLNKEM 251
               ++ 
Sbjct: 263 AIFMEDD 269


>gi|156033113|ref|XP_001585393.1| hypothetical protein SS1G_13632 [Sclerotinia sclerotiorum 1980]
 gi|154699035|gb|EDN98773.1| hypothetical protein SS1G_13632 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 426

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 81/258 (31%), Gaps = 37/258 (14%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              R  +    +    L           Y G   ++ S+H GH+       WLQ     P
Sbjct: 76  FLRRNLVFSHRDLDWILSRHEKGEPFFLYTGRGPSSDSMHLGHMVPFTFTKWLQDVFDVP 135

Query: 71  ISLMGGGTSIIGDPS---FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           + +M     +  D      +            ++N +         +  G       + +
Sbjct: 136 LVIM-----MTDDEKIIFGKKAHTLEEMRAFTRQNAKD-------ILAVGFDLKKTFLFS 183

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           +  ++    Y ++++       ++R++++ + ++      S +  + +Y+ +Q+      
Sbjct: 184 DFDFMGKAFYENVVQ-------ISRLITYNTSKAVFGFNDSDNIGKSHYVAVQSATAFAT 236

Query: 188 A--------KNYDCRLQM---GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
                    +  + ++        DQ        D+  RL   K   + A   P L    
Sbjct: 237 TFPHIFGPDQKKNAKIPSLIPCAIDQDPYFRVCRDVAPRLDYCKPALIHAKFFPALQGPG 296

Query: 234 GTKMGKTLSGAIWLNKEM 251
                   S AI++N  M
Sbjct: 297 SKMSASIDSSAIFMNDTM 314


>gi|325185091|emb|CCA19583.1| tryptophanyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 528

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 76/239 (31%), Gaps = 16/239 (6%)

Query: 15  RGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RGF     +    LD          Y G   ++ SLH GHL       WLQK    P+ +
Sbjct: 197 RGFFFAHRDLNELLDAYEKGESFYLYTGRGPSSGSLHMGHLIPFTFNAWLQKVFQVPLVI 256

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + R Q ++E+   +       I  G       +  N  ++ 
Sbjct: 257 -----------QLTDDEKFLFRDQTLEESRRMMLENVKDIITCGFDIKKTFIFGNTDYIQ 305

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +    L  +    ++  R + F    S    + +   ++      + +      +    
Sbjct: 306 HLYPQVLKVQKCVTYNQARGI-FGFTGSDNIGKSAFPAVQAVPSFPETFPIPFSGRKNLR 364

Query: 194 RLQMGGSDQWGNIICGIDLGERLKT---PKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            L     DQ        D+  RL+      +++   P L  ++        S  I+L+ 
Sbjct: 365 CLIPCAIDQDPYFRMTRDVASRLEYLKPATIYSKFFPALQGSTTKMSASKASSTIYLSD 423


>gi|319956401|ref|YP_004167664.1| tryptophanyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418805|gb|ADV45915.1| tryptophanyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 320

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 87/306 (28%), Gaps = 30/306 (9%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  +  LQK  H+  + +    ++ G         + ++    
Sbjct: 6   GIQPSGK-LHIGNYFGAIAQMLKLQKE-HELFAFIANYHALSG-----GADLKELKQNTF 58

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +  ++ +             ++ A  +    W+           +  +  V  +    S 
Sbjct: 59  EVAVDFLALGIDPDKTVFWVQSHAKEVLELYWI-----------LSRYTPVGLLERAHSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + ++ +  + S   F+Y +L A D +     YD +    G DQ  ++    D+  +    
Sbjct: 108 KDKVAKGIAPSHALFSYPVLMAADIL----LYDAQKVPVGKDQIQHLEMTRDIAIKFNNE 163

Query: 220 KLFALTSP--LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                T P  ++  +     G   +            +   +  +   +  V        
Sbjct: 164 HGEIFTIPEAMVEESVAVVPGIDGAKMSKSYGNTIEIFMEEKALQKRCNKIVTDSTPLGE 223

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIAT-----EITTMVHGREEAEKAATAAMECFDMSIH 332
            L     +  A        + K  +A      E       +E  E          +   +
Sbjct: 224 PLDPENCNVYALASLFLDEQGKTELAERYRSGEYGYGHFKKELKELIWDHFAPAREKRAY 283

Query: 333 SQHMPT 338
               P 
Sbjct: 284 YLEHPE 289


>gi|156094906|ref|XP_001613489.1| tyrosyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148802363|gb|EDL43762.1| tyrosyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 380

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 93/304 (30%), Gaps = 32/304 (10%)

Query: 19  HQISNPRELD-ILCSQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +   P EL   L  +  +  Y G++ +   +H   G L +  ++  L   G + I  + 
Sbjct: 46  SECIQPEELKARLLLKRRLVCYDGFEPSGR-MHIAQG-LLKCQIVNKLTSNGCRFIFWIA 103

Query: 76  GGTSIIGDP-SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
              + + +  S   +  + +    I+                G    +   L     +  
Sbjct: 104 DWFAQLNNKMSGDLKKIKKVGMYFIEVWKSC-----------GMNMQNVEFLWASEEINK 152

Query: 135 IK--YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               Y  L+ +I   F++NR+     +  R + E++    +  Y  +Q  D   L    +
Sbjct: 153 KPNEYWSLVIDISKSFNINRIKRCLKIMGRSEGEENY-CSQILYPCMQCADIFFL----N 207

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFA----LTSPLLTTASGTKMGKTLSGAIWLN 248
             +   G DQ    +   +  E  K  K          P L            + AI+++
Sbjct: 208 VDICQLGIDQRKVNMLAREYCEIKKMKKKPIILSHQMLPGLLEGQEKMSKSDENSAIFMD 267

Query: 249 KEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
                     +        I+   + ++A+ +     +E     K +         I   
Sbjct: 268 DSEADVNRKIKKGYCPPGVIESNPIFAYARSIVFPHYNEFALQRKEKNGGNKTYATIAEL 327

Query: 305 EITT 308
           E   
Sbjct: 328 EADY 331


>gi|289615661|emb|CBI57582.1| unnamed protein product [Sordaria macrospora]
          Length = 491

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 45/145 (31%), Gaps = 12/145 (8%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG +    +    LD          Y G   ++ S+H GH        WLQ T   P
Sbjct: 80  FLRRGIVFSHRDLELILDRYEKGEPFFLYTGRGPSSDSVHVGHTIPFEFTKWLQDTFDVP 139

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +M             D+ + +   +   E +E      +  I       +   + ++ 
Sbjct: 140 LVIM-----------MTDDEKYLFSDKRTIEEVEGYCSNNAKDIIAVGFDPNKTFIFSDF 188

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLS 155
                 +   +  +    ++N+  +
Sbjct: 189 QFMGGAFYKNVVRLSKHITLNQARA 213


>gi|83955333|ref|ZP_00963988.1| RNA pseudouridylate synthase family protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83840326|gb|EAP79500.1| RNA pseudouridylate synthase family protein [Sulfitobacter sp.
           NAS-14.1]
          Length = 335

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            K     G  +  ++ +AG A S  EA R +++  +++N + I +  L +   D  
Sbjct: 10  PKSGTPPGDRIAKVLSRAGIA-SRREAERMIEAGRVRVNGAQIDSPALNVTPSDAI 64


>gi|83944513|ref|ZP_00956965.1| RNA pseudouridylate synthase family protein [Sulfitobacter sp.
           EE-36]
 gi|83844619|gb|EAP82504.1| RNA pseudouridylate synthase family protein [Sulfitobacter sp.
           EE-36]
          Length = 335

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            K     G  +  ++ +AG A S  EA R +++  +++N + I +  L +   D  
Sbjct: 10  PKSGTPPGDRIAKVLSRAGIA-SRREAERMIEAGRVRVNGAQIDSPALNVTPSDAI 64


>gi|320335239|ref|YP_004171950.1| tryptophanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756528|gb|ADV68285.1| tryptophanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 349

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 63/220 (28%), Gaps = 28/220 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            TA  LH GH    +     LQ+  +    L+    ++       +  R  +    +   
Sbjct: 11  PTAP-LHIGHYVGSLQSRVRLQRE-YDTFILIADVQALTDTFEHPERVRANVLQVALDYL 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              +     +F+        A           +  + L     S    N  +  E  +  
Sbjct: 69  AVGLDPQACTFVVQSMVPEIA----------ELTVLYLNLVTVSHLRQNPTVKHEIAQKG 118

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
                   F  F Y + QA D           L   G DQ   I    ++  R       
Sbjct: 119 FGENVPAGF--FVYPVSQAADITAF----GAHLVPVGDDQLPMIEQTNEIVRRFNRLYAP 172

Query: 219 -----PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                  L   T+ L  T    KM K+L  AI+L+  +  
Sbjct: 173 VLTETKALVGETARLPGTDGRAKMSKSLGNAIFLSDSVDE 212


>gi|223975661|gb|ACN32018.1| unknown [Zea mays]
          Length = 408

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 83/243 (34%), Gaps = 17/243 (6%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  E LD+  +      Y G   ++ +LH GHL   M   +LQ+   K 
Sbjct: 70  FLRRGLFFAHRDLNEILDLYENGQKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEA-FKV 128

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++             D+ + + ++  IQE+    +      I  G       + ++ +
Sbjct: 129 PLVI----------QLTDDEKYLWKNLTIQESKRLARENAKDIIACGFDIERTFIFSDFS 178

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           ++    Y +++ ++    ++N+ +            + S   ++       ++  +   K
Sbjct: 179 FVGGAFYENMM-QVARCVTMNKAIGIFGFNLEDHIGKVSFPPVQAVPSFPSSFPHLFAGK 237

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIW 246
           +    L     DQ        D+  R+   K   + +   P L   +        + AI+
Sbjct: 238 DQLRCLIPCAIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQGENTKMSASDANSAIY 297

Query: 247 LNK 249
           +  
Sbjct: 298 VTD 300


>gi|308389127|gb|ADO31447.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325136562|gb|EGC59164.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 336

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 84/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +  ++   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENNQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEIFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|114765382|ref|ZP_01444497.1| RNA pseudouridylate synthase family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114542225|gb|EAU45255.1| RNA pseudouridylate synthase family protein [Roseovarius sp.
           HTCC2601]
          Length = 283

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  EA R ++   + +N   I++  L +  +D  
Sbjct: 17  DTPPGDRIAKVLSRAGIA-SRREAERMIEEGRVTVNGETIASPALNVTDKDRI 68


>gi|308176501|ref|YP_003915907.1| tryptophan--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307743964|emb|CBT74936.1| tryptophan--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 338

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 71/258 (27%), Gaps = 33/258 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
                     G   +  SLH G+    L+     Q   H+    +    + I  P    E
Sbjct: 1   METTRPRVLSGMQPSGDSLHLGNYLGALVNWVKTQD-DHEAFFFIPDMHA-ITTPQDPAE 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     I    S+          A +             + +   G    
Sbjct: 59  LRARTRKTAAQFIAGGIDLDKSTLFVQSQVPEHAQLAW---------VFNCITGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +     S         + S   F Y +L A D + L +     +   G DQ  ++   
Sbjct: 110 MTQFKDKSS----KGGADAASVGLFTYPVLMAADIL-LYQPEGVPV---GDDQRQHVELA 161

Query: 210 IDLGERLKTPKLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL +R         T P   +               KM K+      L   +  P    
Sbjct: 162 RDLAKRFNHRFGQTFTVPEAFIPKEGARIYDLQNPTSKMSKSAESPAGLINVLDEPKLIA 221

Query: 259 QYWRN--IDDADVVSFAK 274
           +  ++   D   VV++ K
Sbjct: 222 KRIKSAVTDAGSVVAYDK 239


>gi|158428905|pdb|2J5B|A Chain A, Structure Of The Tyrosyl Trna Synthetase From Acanthamoeba
           Polyphaga Mimivirus Complexed With Tyrosynol
 gi|158428906|pdb|2J5B|B Chain B, Structure Of The Tyrosyl Trna Synthetase From Acanthamoeba
           Polyphaga Mimivirus Complexed With Tyrosynol
          Length = 348

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 23/266 (8%)

Query: 19  HQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +      L  L   G + TAY G++ +   +H    L  +M    + + G + I  +  
Sbjct: 23  EECETLDRLKQLVDSGRIFTAYNGFEPSGR-IHIAQALITVMNTNNMIECGGQMIIYIAD 81

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSI 135
             + +           +  + +I +  E  +     F   G        +    ++  + 
Sbjct: 82  WFAKMN----------LKMNGDINKIRELGRYFIEVFKACGINLDGTRFIWASEFIASNP 131

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            YI+ + +I  F +++R+     +  R + +  L   +  Y  +QA D  EL       +
Sbjct: 132 SYIERMLDIAEFSTISRVKRCCQIMGRNESDC-LKASQIFYPCMQAADVFELV-PEGIDI 189

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
              G DQ    +  I+           +L+  +L + SG K   + S          +  
Sbjct: 190 CQLGIDQRKVNMLAIEYANDRGLKIPISLSHHMLMSLSGPKKKMSKSDPQGAIFMDDT-- 247

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPM 281
                 + + +    ++    T    
Sbjct: 248 -----EQEVSEKISRAYCTDETFDNP 268


>gi|148269568|ref|YP_001244028.1| tryptophanyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170288244|ref|YP_001738482.1| tryptophanyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|147735112|gb|ABQ46452.1| tryptophanyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170175747|gb|ACB08799.1| tryptophanyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 328

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 93/319 (29%), Gaps = 31/319 (9%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   +     LQ+ G++    +    ++                 ++
Sbjct: 6   GMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHAL------------TTHYDDV 52

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +  E  + +   F+  G     +++          +   L   I S   + R+ +++ +
Sbjct: 53  SKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           +S L  +   +     Y +LQA D + + K     +   G DQ  +I    ++  R    
Sbjct: 113 KSELNYKDLSTAGFLIYPVLQAADIL-IYKAEGVPV---GEDQVYHIELTREIARRFNYL 168

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                  P+      P L    G KM K+    I L                       +
Sbjct: 169 YDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEITEKELEQTILRMMT-----DPA 223

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             +R               Q  +I+E +     E  T         K          ++ 
Sbjct: 224 RVRRSDPGNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAP 283

Query: 332 HSQHMPTISISKDEVSRGM 350
             ++   I      V   +
Sbjct: 284 IWENFKNIDEDPHYVEDVI 302


>gi|326634434|pdb|3P0J|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
           Tyrosinol, Triclinic Crystal Form 1
 gi|326634435|pdb|3P0J|B Chain B, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
           Tyrosinol, Triclinic Crystal Form 1
 gi|326634436|pdb|3P0J|C Chain C, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
           Tyrosinol, Triclinic Crystal Form 1
 gi|326634437|pdb|3P0J|D Chain D, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
           Tyrosinol, Triclinic Crystal Form 1
          Length = 690

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/370 (12%), Positives = 107/370 (28%), Gaps = 35/370 (9%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L  +   +  Y G++ +   +H          +         G +
Sbjct: 19  RSVGEECIQESELRNLIEKKPLIRCYDGFEPSGR-MHIAQGIFKAVNVNKCTA---AGCE 74

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    +++ D                +  IE  K       K     +   + ++ 
Sbjct: 75  FVFWVADWFALMNDKVG---GELEKIRIVGRYLIEVWKAAGMDMDKVLFLWSSEEITSHA 131

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
                  Y  ++ +IG   ++ R+    ++  + +    L+  +  Y ++Q  D   L  
Sbjct: 132 D-----TYWRMVLDIGRQNTIARIKKCCTIMGKTEGT--LTAAQVLYPLMQCCDIFFLK- 183

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                +   G DQ    +   +  + +    K   L+  +L      +   + S      
Sbjct: 184 ---ADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLAGLKQGQAKMSKSDPDSAI 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               +  +  +  R      V   A  +T       D  A +   + N         +  
Sbjct: 241 FMEDTEEDVARKIRQAYCPRVKQSASAIT-------DDGAPVATDDRNPVLDYFQCVVYA 293

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
                   +    A  E  + +  S  +   ++    +     LL  + +     S  EA
Sbjct: 294 RPGAAATIDGTTYATYEDLEQAFVSDEVSEDALKSCLIDEVNALLEPVRQH--FASNEEA 351

Query: 369 RRHLKSNAIK 378
              L+  A+K
Sbjct: 352 HELLE--AVK 359


>gi|182413926|ref|YP_001818992.1| tryptophanyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841140|gb|ACB75392.1| tryptophanyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 321

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 36/234 (15%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQ 97
           G   + + LH G+   +M     LQ+ G +    +    S+  + DP    E RR     
Sbjct: 6   GIQPSGT-LHIGNYFGMMKPAIELQERG-EAYYFIADYHSMTSLFDP----EQRRQNTLG 59

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
              + +                ++D   +   TW+           IG+   +  +    
Sbjct: 60  VALDFLACG---LDPKRSVFWRQSDVAEVTELTWI-----------IGTLTPMGLLERAH 105

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           S + +  R  S +F  F Y +L A D +     +D  L   G DQ  ++    D+  +  
Sbjct: 106 SYKDKTARGISPNFGLFAYPVLMAADIL----LFDSNLVPVGRDQKQHVEMTRDIAIKFN 161

Query: 218 T---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                            + ++    G KM K+    + +  +  +        +
Sbjct: 162 QAYGETLVVPEPEIRDETAIVPGLDGQKMSKSYGNTVEIFGDEKAIRKKIMGIK 215


>gi|157866691|ref|XP_001687737.1| tyrosyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68125351|emb|CAJ03211.1| putative tyrosyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 682

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/370 (12%), Positives = 107/370 (28%), Gaps = 35/370 (9%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L  +   +  Y G++ +   +H          +         G +
Sbjct: 11  RSVGEECIQESELRNLIEKKPLIRCYDGFEPSGR-MHIAQGIFKAVNVNKCTA---AGCE 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    +++ D                +  IE  K       K     +   + ++ 
Sbjct: 67  FVFWVADWFALMNDKVG---GELEKIRIVGRYLIEVWKAAGMDMDKVLFLWSSEEITSHA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
                  Y  ++ +IG   ++ R+    ++  + +    L+  +  Y ++Q  D   L  
Sbjct: 124 D-----TYWRMVLDIGRQNTIARIKKCCTIMGKTEGT--LTAAQVLYPLMQCCDIFFLK- 175

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                +   G DQ    +   +  + +    K   L+  +L      +   + S      
Sbjct: 176 ---ADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLAGLKQGQAKMSKSDPDSAI 232

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               +  +  +  R      V   A  +T       D  A +   + N         +  
Sbjct: 233 FMEDTEEDVARKIRQAYCPRVKQSASAIT-------DDGAPVATDDRNPVLDYFQCVVYA 285

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
                   +    A  E  + +  S  +   ++    +     LL  + +     S  EA
Sbjct: 286 RPGAAATIDGTTYATYEDLEQAFVSDEVSEDALKSCLIDEVNALLEPVRQH--FASNEEA 343

Query: 369 RRHLKSNAIK 378
              L+  A+K
Sbjct: 344 HELLE--AVK 351


>gi|326523199|dbj|BAJ88640.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 341

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  E LD+         Y G   ++ +LH GHL   M   +LQ     P
Sbjct: 61  FLRRGLFFAHRDFNEILDLYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVP 120

Query: 71  ISL 73
           + +
Sbjct: 121 LVI 123


>gi|302833090|ref|XP_002948109.1| hypothetical protein VOLCADRAFT_80016 [Volvox carteri f.
           nagariensis]
 gi|300266911|gb|EFJ51097.1| hypothetical protein VOLCADRAFT_80016 [Volvox carteri f.
           nagariensis]
          Length = 403

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 74/263 (28%), Gaps = 33/263 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
             +RG      + +E+     +G     Y G   ++ +LH GHL   M   +LQ   + P
Sbjct: 67  FLKRGIFFAHRDLQEILDCYEKGIPFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFNVP 126

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +                    +   E                +       A   +   
Sbjct: 127 LVI-------------------QLTDDEKSLWRGLDIDEARRLARENAKDIIACGFDVSK 167

Query: 131 -WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE--- 186
            ++ S           +   + R ++   VR      Q  +  +  +  +QA        
Sbjct: 168 TFIFSDFEYVGGAFYRNIIRIQRCVTMNQVRGIFGFTQEDNIGKIAFPAVQAAPSFPDCF 227

Query: 187 -----LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMG 238
                  K+  C +     DQ        D+  R+   K   +     P L   SG    
Sbjct: 228 PHMFGQRKDIRCLIPC-AIDQDPYFRMTRDVAPRIGHQKPALIESKFFPALQGESGKMSA 286

Query: 239 KTLSGAIWLNKEMTSPYNFWQYW 261
              + AI++N   +   +    +
Sbjct: 287 SDANSAIFVNDTPSQIKDKINKY 309


>gi|254493515|ref|ZP_05106686.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|226512555|gb|EEH61900.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
          Length = 336

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +   + M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEQEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFQELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAEFTQVLADGLAWGEAKKLLAAKINAELAEL 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                   S    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNALTSNPSQIEEIL-QAGAQKARKEARELL 323


>gi|302691502|ref|XP_003035430.1| hypothetical protein SCHCODRAFT_81523 [Schizophyllum commune H4-8]
 gi|300109126|gb|EFJ00528.1| hypothetical protein SCHCODRAFT_81523 [Schizophyllum commune H4-8]
          Length = 437

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 76/248 (30%), Gaps = 18/248 (7%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           IL  RG      +  + LD          Y G   ++ S+H GH+   +   W+Q     
Sbjct: 91  ILLRRGTFFSHRDFSQILDRYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWMQDVFDV 150

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           P+ +              D+ + + + Q   E +++     +  I       +   + + 
Sbjct: 151 PLVV-----------QLTDDEKFLFKHQLKVEQVKEFSRQNAKDIIAVGFDLNKTFIFSN 199

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
               +  + + +  I    + N+  +           + + F+        +  F ++  
Sbjct: 200 YAYMNGAFYENVSRISRQITYNQARATFGFNESDNIGK-IHFVSIQAAPAFSNSFPQIFG 258

Query: 190 NYDCRLQM--GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGA 244
                  +     DQ        D+  +LK PK     +   P L            + +
Sbjct: 259 TASNIPALIPCAIDQDPYFRLTRDIASKLKYPKPALLHSRFFPALQGPQTKMSASDPNSS 318

Query: 245 IWLNKEMT 252
           I++  +  
Sbjct: 319 IFMTDKPN 326


>gi|152991113|ref|YP_001356835.1| tryptophanyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422974|dbj|BAF70478.1| tryptophanyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 330

 Score = 50.5 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 104/341 (30%), Gaps = 53/341 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   LH GH   ++   W  LQ+  H+    +    ++               S E
Sbjct: 6   GMRPTGK-LHLGHYLGVLK-NWVNLQEE-HECFFFVADWHAL-------------STSYE 49

Query: 99  IQENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            + N++ +   +   +I  G     + +          +   LL  I     + R  +++
Sbjct: 50  DKLNLKNLSIELVRDWIAAGIDPQKSTIFIQSAIKEHAELYVLLNMITPLGWLERNPTYK 109

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
              +++K +   +     Y +LQ  D V     YD +    G DQ  ++    ++  R  
Sbjct: 110 DQLAQIKNKDIHTAGFLTYPVLQTADIV----LYDAQAVPIGEDQRPHLEIAREIVRRFH 165

Query: 218 T---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                     PK     +P L    G KM K+ + AI+L+    +P   W+  R      
Sbjct: 166 HLFGCEVFTEPKELLSPTPRLLGLDGRKMSKSYNNAIYLS---DTPEEVWKKLRGA---- 218

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
                   T     +       +   I +  K  + E T           A         
Sbjct: 219 -------KTDPQRVKKTDPGNPEVCLIYDYHKAFSDEETIQKVEEGCRTAAIGCVECKKW 271

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            +   + +      + E      +  ++          EA+
Sbjct: 272 CAAAIEKVLEPMRERRESISDEDIAIILQ-------KGEAK 305


>gi|302816218|ref|XP_002989788.1| hypothetical protein SELMODRAFT_130546 [Selaginella moellendorffii]
 gi|300142354|gb|EFJ09055.1| hypothetical protein SELMODRAFT_130546 [Selaginella moellendorffii]
          Length = 333

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ SLH GHL Q M   +LQ     P
Sbjct: 51  FLRRGIFFAHRDLESILDAYEQGHKFFLYTGRGPSSESLHLGHLVQFMFTKYLQDAFDVP 110

Query: 71  ISL 73
           + +
Sbjct: 111 LVI 113


>gi|302816915|ref|XP_002990135.1| hypothetical protein SELMODRAFT_185043 [Selaginella moellendorffii]
 gi|300142148|gb|EFJ08852.1| hypothetical protein SELMODRAFT_185043 [Selaginella moellendorffii]
          Length = 369

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ SLH GHL Q M   +LQ     P
Sbjct: 51  FLRRGIFFAHRDLESILDAYEQGHKFFLYTGRGPSSESLHLGHLVQFMFTKYLQDAFDVP 110

Query: 71  ISL 73
           + +
Sbjct: 111 LVI 113


>gi|126465398|ref|YP_001040507.1| tryptophanyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014221|gb|ABN69599.1| tryptophanyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 368

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 69/229 (30%), Gaps = 32/229 (13%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L  L +   V    G+  +  + H GHL  +  L +LQ+ G     ++    +       
Sbjct: 57  LQALRNGEKVAVLTGFMPSGHT-HLGHLMVIEELRFLQELGAHVKIVIADAEAY------ 109

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
               R++ R + I+  IE I                  +        +  Y    ++   
Sbjct: 110 --AVRKLSREETIEYGIEYI---------------THAIAWGLDPEKTEFYFQTAQKTEY 152

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM----GGSDQ 202
           +  +       S+         +S  +    + QA D + L        +      G+DQ
Sbjct: 153 YRLIQMFSRKVSMAEMEAIYGDISPGKIIASLTQAADILHLQLPEYGGYKYVLVPVGADQ 212

Query: 203 WGNIICGIDLGERLKTP----KLFALTSPLLTTASGTKMGKTLSGAIWL 247
             ++    D+ +R  T     +  +     +    G KM  +       
Sbjct: 213 DPHLRLSRDIADRFHTELGLNRPASFYHKFIRGLDGNKMSSSKPDYAIF 261


>gi|326479174|gb|EGE03184.1| tryptophanyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 446

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +  + LD          Y G   ++ +LH GH   L    WLQ 
Sbjct: 80  RGLFFSHRDFDKILDKYEKGEPFFLYTGRGPSSDALHLGHTIPLTFTKWLQD 131


>gi|240849166|ref|NP_001155620.1| tryptophanyl-tRNA synthetase-like [Acyrthosiphon pisum]
 gi|239791875|dbj|BAH72348.1| ACYPI005300 [Acyrthosiphon pisum]
          Length = 403

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 72/241 (29%), Gaps = 22/241 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L++         Y G   +++SLH GHL   +   WLQ   + P+ +             
Sbjct: 84  LNLYEQGKPFYLYTGRGPSSNSLHIGHLIPFIFTKWLQDAFNVPLVI-----------QL 132

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   ++E            I  G  K +  + ++  ++             +
Sbjct: 133 TDDEKYLWKDLTLEEAKRLSVENAKDIIACGFDKKNTFIFSDLQFMGE-----CPSFYAN 187

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA---YDFVELAKNYDCRLQM---GGS 200
              + + ++F  V+       S    +  +  +QA             D ++        
Sbjct: 188 VLRIQKSVTFNQVKGIFGFGDSDVIGKIAFPAVQAAPCLSSTFPFIFGDVKVPCLVPCAI 247

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           DQ        D+  +L   K   + S  L +  G     + S          +P      
Sbjct: 248 DQDPYFRMTRDVAPKLGFSKPALIHSSFLPSLQGADTKMSASDLNSSIYLKDTPKEIKNK 307

Query: 261 W 261
            
Sbjct: 308 I 308


>gi|332020200|gb|EGI60644.1| Tryptophanyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 411

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 26/248 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +   +  L  QG +   Y G   ++ ++H GHL   M   WLQ+  + P
Sbjct: 69  FLRRGIFFSHRDMHTILNLYEQGKLFYLYTGRGPSSDAMHLGHLIPFMFCKWLQEVFNVP 128

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + ++  I++ I+         I  G       + +N  
Sbjct: 129 LII-----------QLTDDEKAIWKNLNIEDAIKLAYANARDIIACGFNPEKTFIFSNLE 177

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFV 185
                   +      +   + + ++F  V+       S    +  +   QA       F 
Sbjct: 178 -----HIGNNSTFYQNMIRIQKCVTFNQVKGIFGFGDSDPIAKIAFPPTQAAPAISGSFP 232

Query: 186 ELAKNYDCRLQM-GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTL 241
            + K+      +    DQ        D+  RL  PK     A   P L  +         
Sbjct: 233 FIFKDTKVHCLIPCAIDQDPYFRMTRDVAPRLGFPKPALLHATFFPALQGSKTKMSASDN 292

Query: 242 SGAIWLNK 249
           + AI+L  
Sbjct: 293 NTAIFLTD 300


>gi|302843820|ref|XP_002953451.1| hypothetical protein VOLCADRAFT_43315 [Volvox carteri f.
           nagariensis]
 gi|300261210|gb|EFJ45424.1| hypothetical protein VOLCADRAFT_43315 [Volvox carteri f.
           nagariensis]
          Length = 347

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 92/296 (31%), Gaps = 34/296 (11%)

Query: 14  ERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKP 70
            R    +  N  EL  L ++  +  AY G++ +   +H   G +  + +   L K G   
Sbjct: 8   ARSVAEECINDDELRALLAKKPLPIAYDGFEPSGR-MHIAQGVMKAINVNK-LTKAGCHF 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    + + +    D          +++     K +   +   G   +    L++  
Sbjct: 66  KFWVADWFAQLNNKMGGD----------LKKIQTVGKYMVEVWKAVGMDLSKVEFLSSSE 115

Query: 131 WLCSIK--YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +      Y  L+ +I    ++ R++    +  R + +  LS  +  Y  +Q  D   L 
Sbjct: 116 EINKRPDEYWTLVMDIARKNNLKRIVRCSQIMGRNETDD-LSAAQIFYPCMQCADIFFLK 174

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFA--LTSPLLTTASGTKMGKTLSGA 244
                 +   G DQ    +   +  +  + K   +       P L      KM K+   +
Sbjct: 175 ----ADICQLGMDQRKVNMLAREYCDDIKRKLKPIILSHRMMPGLL-EGQEKMSKSDPNS 229

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
               +         +   N          K  T  P  E  +   L      E ++
Sbjct: 230 AIFME-------DTEAEVNTKIKKAYCPPKVTTGNPCVEYVKYIVLPWFGYFEVRR 278


>gi|108862789|gb|ABA99449.2| Tryptophanyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 333

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  E LD+         Y G   ++ +LH GHL   M   +LQ     P
Sbjct: 70  FLRRGLFFAHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVP 129

Query: 71  ISL 73
           + +
Sbjct: 130 LVI 132


>gi|115488928|ref|NP_001066951.1| Os12g0540900 [Oryza sativa Japonica Group]
 gi|77556651|gb|ABA99447.1| Tryptophanyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113649458|dbj|BAF29970.1| Os12g0540900 [Oryza sativa Japonica Group]
 gi|125536912|gb|EAY83400.1| hypothetical protein OsI_38615 [Oryza sativa Indica Group]
          Length = 408

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  E LD+         Y G   ++ +LH GHL   M   +LQ     P
Sbjct: 70  FLRRGLFFAHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVP 129

Query: 71  ISL 73
           + +
Sbjct: 130 LVI 132


>gi|108862788|gb|ABA99448.2| Tryptophanyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 341

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  E LD+         Y G   ++ +LH GHL   M   +LQ     P
Sbjct: 70  FLRRGLFFAHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVP 129

Query: 71  ISL 73
           + +
Sbjct: 130 LVI 132


>gi|255073235|ref|XP_002500292.1| predicted protein [Micromonas sp. RCC299]
 gi|226515554|gb|ACO61550.1| predicted protein [Micromonas sp. RCC299]
          Length = 349

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 82/245 (33%), Gaps = 27/245 (11%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLF---WLQKTGHKP 70
           R    +     EL  L  +  V   Y G++ +   +H      +M       L K G   
Sbjct: 11  RSVGEECIQEAELRNLLDKKPVPVCYDGFEPSGR-MHI--AQGVMKCLNVNKLTKAGCHF 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    +++ +    D          +++  +  + +   +   G   +    + +  
Sbjct: 68  KFWVADWFALMNNKMGGD----------LKKIQKVGQYMVEVWKAVGMDLSRVEFIWSSE 117

Query: 131 WLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +     +Y  L+ +I     + R+L    +  R + ++ L+  +  Y ++Q  D   L 
Sbjct: 118 EINKRGHEYWPLVLDIARRNKLARILRCTQIMGRSETDE-LAASQIFYPVMQCADIFFL- 175

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASGTKMGKTLSGAI 245
                 +   G DQ    +   +  E +K   K   L+  +L        KM K+   + 
Sbjct: 176 ---GADICQLGVDQRKVNMLAREYCEDIKRKNKPVILSHHMLMGLKQGQEKMSKSDPESA 232

Query: 246 WLNKE 250
              ++
Sbjct: 233 IFMED 237


>gi|84686243|ref|ZP_01014138.1| RNA pseudouridylate synthase family protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84665770|gb|EAQ12245.1| RNA pseudouridylate synthase family protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 293

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           D+   G  +  ++ +AG   S  EA R +++  + +N  +I +  L +  +D  
Sbjct: 30  DKTPPGDRIAKVLSRAG-VASRREAERMIEAGRVSVNGKVIDSPALNVTPRDKI 82


>gi|58259771|ref|XP_567298.1| tryptophan-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116718|ref|XP_773031.1| hypothetical protein CNBJ3070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255651|gb|EAL18384.1| hypothetical protein CNBJ3070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229348|gb|AAW45781.1| tryptophan-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 641

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 75/254 (29%), Gaps = 23/254 (9%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG  +   +    LD          Y G   ++ S+H GHL   M   +LQ+  + P
Sbjct: 264 LLRRGTFYSHRDFNLILDRYEKGQPFYLYTGRGPSSDSMHMGHLVPFMFTAYLQRVFNVP 323

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-----------IFSSFIKYGTG 119
           + +       I D       R   + QE+ + I+  K              +       G
Sbjct: 324 LVI------QITDDEKYLLERDAKKQQELMKKIKAKKPLDLLRYYKKMGQDNIKDIIACG 377

Query: 120 KTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYM 177
                          S  + + +  I    ++++  +               + ++    
Sbjct: 378 VIPEKTFIFSDLNTVSGVFYENVNLISKTITLSQSRNIFGFSDSDNVGMFHFAAVQATPS 437

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASG 234
              ++  +   ++    L     DQ    +   D  +RL   K     A   P L  A  
Sbjct: 438 FCNSFPQIFGTRDDIPALIPCAIDQDPYFLLTRDSADRLGYKKPALLHAKFLPALQGAGT 497

Query: 235 TKMGKTLSGAIWLN 248
                  + AI++ 
Sbjct: 498 KMSASKENTAIFMT 511


>gi|255552884|ref|XP_002517485.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
 gi|223543496|gb|EEF45027.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
          Length = 413

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L ++      Y G++ +   +H   G +  + +   L   G K  
Sbjct: 41  RGIGEECIQEDELLNLLTKKPQPICYDGFEPSGR-MHIAQGVMKTINVNK-LTSAGCKVK 98

Query: 72  SLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             +    + + +    D +  + +    ++        +    +++     +      E 
Sbjct: 99  IWIADWFAQLNNKMGGDLKKIQTVGRYFVEIWKAAGMDLDGGKVEFLWSSEEINSRAAEY 158

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W        L+ +I     + R+L    +  R ++++ L+  +  Y  +Q  D   L   
Sbjct: 159 W-------PLVMDIARRNKLPRILRCVQIMGRSEQDE-LTAAQILYPCMQCADIFFLK-- 208

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWL 247
               +   G DQ    +   +  + +K   K   L+  +L        KM K+   +   
Sbjct: 209 --ADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQEGQDKMSKSDPSSSIF 266

Query: 248 NKE 250
            ++
Sbjct: 267 MED 269


>gi|326427150|gb|EGD72720.1| hypothetical protein PTSG_04448 [Salpingoeca sp. ATCC 50818]
          Length = 546

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 17/228 (7%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+       +  Y G   ++ ++H GHL   +   +LQ+    P+ +      +  D  F
Sbjct: 217 LEKKAKGEPIFLYTGRGPSSQAMHLGHLIPFLFTKYLQEAFDLPLVI-----QMTDDEKF 271

Query: 87  ---RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
              R+ +        +       +      I  G       + ++  ++    Y +++  
Sbjct: 272 LFKRNLTLDDDPETGV---AALCRENVKDIIAVGFDPDKTFIFSDLQYMGGDFYRNVV-R 327

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
                ++N+ +            Q +SF     +      F  + +     L     DQ 
Sbjct: 328 FERCVTLNQAMKIFDFTRENNIGQ-ISFCAIQAVPSFPSSFPGIIQPGAHCLIPCAIDQD 386

Query: 204 GNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLN 248
                  D+  RL   K     ++  P +T    +KM  + +    + 
Sbjct: 387 PYFRLTRDVAPRLGYEKPSLLHSVFFPAMTG-GSSKMSSSANAVASIF 433


>gi|126460427|ref|YP_001056705.1| tryptophanyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166225536|sp|A3MX72|SYW_PYRCJ RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|126250148|gb|ABO09239.1| tryptophanyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 374

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 68/247 (27%), Gaps = 25/247 (10%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK-TGHK 69
           L  RGF +   +    L           Y G   +   +H GH+   +LL WL    G +
Sbjct: 48  LIRRGFFYAHRDLDAILKWHGEGKPWALYTGRGPSGP-VHIGHMVPWILLKWLSDKFGVE 106

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               M        DP  R E          +  ++ I   F+    +    T  +     
Sbjct: 107 VYFQMTDDEKFYDDPEMRLEE---ATKWAYENALDVIALGFTPDKLHLIIDTKDI----- 158

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
                     +  ++    + N      +V++      S +     Y  LQ        +
Sbjct: 159 -----KPLYPIAAKVAKKLTWN------TVKATFGFTDSTNIGLIFYPSLQIAVAFLPTE 207

Query: 190 NYDCRLQM---GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +     +      DQ        D+ E L  PK   L S  +   +G       +    
Sbjct: 208 LHGRPTPVLIPCAIDQDPYFRLARDIAESLGYPKPATLYSKFIMALTGESKMSASNPNSA 267

Query: 247 LNKEMTS 253
           +      
Sbjct: 268 IYTIDDE 274


>gi|110679275|ref|YP_682282.1| RNA pseudouridylate synthase family protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109455391|gb|ABG31596.1| RNA pseudouridylate synthase family protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 285

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++ +   +G  +  ++ +AG   S  EA R +++  +K+N   IS+  L ++  D  
Sbjct: 1   MTSELTPQGDRIAKVLSRAG-VASRREAERMIEAGRVKVNGKPISSPALNVQASDKI 56


>gi|302664645|ref|XP_003023950.1| tryptophanyl-tRNA synthetase [Trichophyton verrucosum HKI 0517]
 gi|291187973|gb|EFE43332.1| tryptophanyl-tRNA synthetase [Trichophyton verrucosum HKI 0517]
          Length = 446

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +  + LD          Y G   ++ +LH GH   L    WLQ 
Sbjct: 80  RGLFFSHRDFDKILDKYEKGEPFFLYTGRGPSSDALHLGHTIPLTFTKWLQD 131


>gi|148906625|gb|ABR16464.1| unknown [Picea sitchensis]
          Length = 399

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 29/250 (11%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +   RG         + LD          Y G   ++ +LH GHL   M   +LQ    K
Sbjct: 60  VFLRRGVFFAHREFDKILDAFEKGENFYLYTGRGPSSEALHLGHLVPFMFTKYLQDA-FK 118

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++             D+ + M ++  I+E+    +      I  G   +   + ++ 
Sbjct: 119 VPLVI----------QLTDDEKCMWKNLTIEESQRLARENAKDIIACGFDISRTFIFSDF 168

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDF 184
            ++    Y +++  I    ++N+      VR+           + ++  +QA       F
Sbjct: 169 DYVGGAFYKNMV-RIAKCVTLNQ------VRAIFGFTGEDHIGKVSFPPVQAAPSFPSSF 221

Query: 185 VELAKNYDC--RLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGK 239
             L  + +    L     DQ        D+  R+   K   + +L  P L   +G     
Sbjct: 222 PHLFGDKNNLRCLIPCAIDQDPYFRMTRDVAPRIGCQKPSLIESLFFPALQGETGKMSAS 281

Query: 240 TLSGAIWLNK 249
             + AI++  
Sbjct: 282 DSTTAIYVTD 291


>gi|260574583|ref|ZP_05842586.1| RNA-binding S4 domain protein [Rhodobacter sp. SW2]
 gi|259023000|gb|EEW26293.1| RNA-binding S4 domain protein [Rhodobacter sp. SW2]
          Length = 358

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
               P     K  +  G  +  ++ +AG A S  EA R ++   + +N  +I++  L + 
Sbjct: 1   MTESPKKPAPKPALPEGDRIAKVLSRAGIA-SRREAERMIELGQVAVNGKVITSPALNVT 59

Query: 393 LQDFD 397
            +D  
Sbjct: 60  AKDRI 64


>gi|294948890|ref|XP_002785946.1| IFP53, putative [Perkinsus marinus ATCC 50983]
 gi|239900054|gb|EER17742.1| IFP53, putative [Perkinsus marinus ATCC 50983]
          Length = 452

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 68/261 (26%), Gaps = 20/261 (7%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    LD          Y G   ++ SLH GHL       WLQ T   P
Sbjct: 101 FLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVP 160

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE         ++E            I  G       + ++  
Sbjct: 161 LVI------QLTD----DEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLD 210

Query: 131 WLCSIKYIDLLREIGSFFSVNR----MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++ ++       +    ++  R        +SV        S   ++ +      +  + 
Sbjct: 211 YMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVAK-----SSFCAIQASPSFSTTFPSIF 265

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
             +     L     DQ        D+  R+   K   + S       G K   + S    
Sbjct: 266 GDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHKTKMSGSVGNT 325

Query: 247 LNKEMTSPYNFWQYWRNIDDA 267
                  P            +
Sbjct: 326 TIMVTDKPKEIKNKIMKYCFS 346


>gi|254578488|ref|XP_002495230.1| ZYRO0B06380p [Zygosaccharomyces rouxii]
 gi|238938120|emb|CAR26297.1| ZYRO0B06380p [Zygosaccharomyces rouxii]
          Length = 430

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 69/232 (29%), Gaps = 21/232 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+         Y G   ++ S+H GH+   +   WLQ     P+ +             
Sbjct: 92  LDLYEQGKPFFLYTGRGPSSDSVHLGHMIPFIFTKWLQDVFDVPLVI------------- 138

Query: 87  RDESRRMMRSQEIQENIEK----IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
            + +       + +  IE      K      I  G    +  + ++  ++ S  Y  ++R
Sbjct: 139 -ELTDDEKFLFKQKLTIEDVKGFSKENCKDIIAVGFNPENTFIFSDLEYMGSGFYETVVR 197

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
                        F    S    +   + ++       +Y  V         L     DQ
Sbjct: 198 VSRQITGSTAKAVFGFNDSDNIGKFHFASIQIASSFPSSYPDVLGLPPKTPCLIPCAIDQ 257

Query: 203 WGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                   D+ E+LK  K     A   P L  ++        + AI++    
Sbjct: 258 DPYFRVCRDVAEKLKFSKPALMHAKFFPALQGSTTKMSASDDTSAIFMTDTP 309


>gi|224102881|ref|XP_002312840.1| predicted protein [Populus trichocarpa]
 gi|118482985|gb|ABK93404.1| unknown [Populus trichocarpa]
 gi|222849248|gb|EEE86795.1| predicted protein [Populus trichocarpa]
          Length = 404

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 76/243 (31%), Gaps = 15/243 (6%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +   RG      +  E LD          Y G   ++ +LH GHL   M   +LQ    +
Sbjct: 65  VFLRRGVFFAHRDFNEILDAYEKGKKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDV-FR 123

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++             D+ + M ++  ++E+    +      I  G   T   + ++ 
Sbjct: 124 VPLVI----------QLTDDEKCMWKNLTVEESQRLARENAKDIIACGFDITRTFIFSDF 173

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            ++    Y ++++             F         + S   ++       ++  +   K
Sbjct: 174 DYVGGAFYKNMVKVAKCVTLNKVQGIFGFSGEDHIGKISFPPVQAVPSFPSSFPHLFSGK 233

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIW 246
           +    L     DQ        D   R+   K   + +   P L   +G       + AI+
Sbjct: 234 DDLRCLIPCAIDQDPYFRMTRDAAPRIGYHKPSLIESTFFPALQGETGKMSASDPNSAIY 293

Query: 247 LNK 249
           +  
Sbjct: 294 VTD 296


>gi|15643258|ref|NP_228302.1| tryptophanyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|7994692|sp|Q9WYW2|SYW_THEMA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|4981003|gb|AAD35577.1|AE001726_11 tryptophanyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 328

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 26/232 (11%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   +     LQ+ G++    +    ++                 ++
Sbjct: 6   GMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHAL------------TTHYDDV 52

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +  E  + +   F+  G     +++          +   L   I S   + R+ +++ +
Sbjct: 53  SKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           +S L  +   +     Y +LQA D + + K     +   G DQ  +I    ++  R    
Sbjct: 113 KSELNYKDLSTAGFLIYPVLQAADIL-IYKAEGVPV---GEDQVYHIELTREIARRFNYL 168

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                  P+      P L    G KM K+    I L                
Sbjct: 169 YDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEISEKELEQTILRMMT 220


>gi|321258552|ref|XP_003193997.1| tryptophan-tRNA ligase [Cryptococcus gattii WM276]
 gi|317460467|gb|ADV22210.1| tryptophan-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 641

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 75/254 (29%), Gaps = 23/254 (9%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG  +   +    LD          Y G   ++ S+H GHL   M   +LQ+  + P
Sbjct: 264 LLRRGTFYSHRDFNLILDRYEKGQPFYLYTGRGPSSDSMHMGHLVPFMFTAYLQRVFNVP 323

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-----------IFSSFIKYGTG 119
           + +       I D       R   + QE+ + I+  K              +       G
Sbjct: 324 LVI------QITDDEKYLLERDAKKQQELMKKIKAKKPLDLLRYYKKMGQDNIKDIIACG 377

Query: 120 KTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYM 177
                          S  + + +  I    ++++  +               + ++    
Sbjct: 378 VIPEKTYIFSDLNTVSGVFYENVNLISKTITLSQSRNIFGFSDSDNVGMFHFAAVQATPS 437

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASG 234
              ++  +   ++    L     DQ    +   D  +RL   K     A   P L  A  
Sbjct: 438 FCNSFPQIFGTRDDIPALIPCAIDQDPYFLLTRDSADRLGYKKPALLHAKFLPALQGAGT 497

Query: 235 TKMGKTLSGAIWLN 248
                  + AI++ 
Sbjct: 498 KMSASKENTAIFMT 511


>gi|304387134|ref|ZP_07369381.1| tryptophan--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338786|gb|EFM04893.1| tryptophan--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 336

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 84/334 (25%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRSAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFRELFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG A +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAAKARKEARELL 323


>gi|325120712|emb|CBZ56267.1| hypothetical protein NCLIV_066920 [Neospora caninum Liverpool]
          Length = 430

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 72/241 (29%), Gaps = 27/241 (11%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +   P EL  L  +      Y G++ +   +H   G L ++  +  L K G   +  + 
Sbjct: 96  QECIQPEELRSLLEKKPFPLCYDGFEPSGR-MHVAQG-LLKVTNVNKLTKAGCVFVFWVA 153

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ +   +         +  +  IE  K         G    +   L     +   
Sbjct: 154 DWFAMLNN---KMNGDLKKIQKVGEYFIEVWKA-------AGMDMQNVRFLWASEEINRN 203

Query: 136 KYIDLLREIGSFFSVNRMLSFESVR---SRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                ++ +    S          +    +   EQ     +  Y  +Q  D   L     
Sbjct: 204 SDQYWVQVMQIARSFTITRIKRCSQIMGRQEGDEQPA--AQIMYPCMQCADIFYL----G 257

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWLNK 249
             +   G DQ    +   +  + +K   K   L+  +L        KM K+   +    +
Sbjct: 258 ADICQLGMDQRKVNMLAREYCDEIKRKLKPIILSHQMLPGLLEGQEKMSKSNPDSAIFME 317

Query: 250 E 250
           +
Sbjct: 318 D 318


>gi|302784845|ref|XP_002974194.1| hypothetical protein SELMODRAFT_442375 [Selaginella moellendorffii]
 gi|300157792|gb|EFJ24416.1| hypothetical protein SELMODRAFT_442375 [Selaginella moellendorffii]
          Length = 390

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 29/252 (11%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
               RG      +  + LD          Y G   ++ +LH GHL   M   +LQ     
Sbjct: 50  TFLRRGVFFAHRDFEKVLDSYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKV 109

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           P+ +              D+ + M ++  ++E     +      I  G   +   + ++ 
Sbjct: 110 PLVI-----------QLTDDEKCMWKNLSVEETKRLARENAKDIIACGFDISRTFIFSDF 158

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA- 188
            ++    Y +++       S+ + ++F  V+     +      +  +  +QA      + 
Sbjct: 159 QYVGRGFYENMI-------SIAKSVTFNQVKGIFGFDGESHIGKIFFPAVQAAPSFPTSF 211

Query: 189 ------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGK 239
                 K+    L     DQ        D+  RL   K   + +   P L   SG     
Sbjct: 212 PHLFGTKSKIKCLIPCAIDQDPYFRMTRDVAPRLGYQKPALIESRFFPALQGESGKMSAS 271

Query: 240 TLSGAIWLNKEM 251
             + AI++    
Sbjct: 272 DTNSAIYVKDTQ 283


>gi|256393774|ref|YP_003115338.1| tryptophanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360000|gb|ACU73497.1| tryptophanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 354

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 71/257 (27%), Gaps = 30/257 (11%)

Query: 24  PRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
             EL          +    G   T   LH GH    +     LQ  G     L+     I
Sbjct: 18  EAELTAQLVGDARQIRVLTGDRPTGP-LHLGHYLGSLRNRVRLQDAGADMFVLVADYQVI 76

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
               + RD S  +     +    + +              +    +N    L  +  I +
Sbjct: 77  ----TDRDASSSIAD-FALGLVADYLAVGLDPARSTVFAHSAVPAVNQL-LLPLMSLISV 130

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
                +  +     +            +LS L   Y + QA D +         L   G 
Sbjct: 131 PELERNPTTKAEAAA--------SGRPALSALMLTYPVHQAADIL----FCRSDLVPVGK 178

Query: 201 DQWGNIICGIDLGERLKTPKLFALT--------SPLLTTASGTKMGKTLSGAIWLNKEMT 252
           DQ  ++     +  R  T      T        +P +  + G KM K+ S  I L     
Sbjct: 179 DQLPHLEVARTVARRFNTRYAPVFTEPRALISDAPSVLGSDGHKMSKSHSNTIPLQATAD 238

Query: 253 SPYNFWQYWRNIDDADV 269
                 + ++   D  +
Sbjct: 239 QTAALIKGFKTDTDRHI 255


>gi|209881741|ref|XP_002142308.1| tRNA synthetases class I family protein [Cryptosporidium muris
           RN66]
 gi|209557914|gb|EEA07959.1| tRNA synthetases class I family protein [Cryptosporidium muris
           RN66]
          Length = 373

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 100/373 (26%), Gaps = 32/373 (8%)

Query: 3   AFKSDFLSILSERGFI-----HQISNPRELDILCSQG-VVTAYIGYDLTASSLHA--GHL 54
           + K   L IL ER  I      +     EL  L  +      Y G++ +   +H   G L
Sbjct: 19  SLKKSTL-ILEERLSICLSVGSECIQKTELMELLKRKDHPICYDGFEPSGR-MHIAQGIL 76

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             + +   L   G   +  +    +++ +    D           +  IE  +       
Sbjct: 77  KAINVNK-LTSAGCIFVFWIADWFALLNNKMGGDLE---KIQTVGKYFIEVWRA------ 126

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLE 173
             G   T+   L     + +      LR I      N        +    +         
Sbjct: 127 -AGMDMTNVRFLWASDEINNNSSAYWLRVIDISRKFNISRIKRCCQIMGRQESDDQPCAA 185

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL---T 230
             Y  +Q  D   L       +   G DQ    +   +  + +   +   + S  +    
Sbjct: 186 VLYPCMQCADIFHLK----ADICQLGMDQRKVNMLAREYCDTVGIKEKPIILSHAMLPGL 241

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-DDADVVSFAKRLTTLPMSEIDRMAK 289
                KM K+   +    +   SP +  +  +       V+     +T +     ++   
Sbjct: 242 LEGQEKMSKSNPSSAIFVE--DSPEDIKRKIKKAYCPPGVIEGNPCVTYVDSLVFNKFGH 299

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
                  E    I  +     H   E+       ++   +   +  +  I          
Sbjct: 300 FIVHRKPEYGGEIIFKTVEEFHKAYESGDLHPGDLKMALVDAINLMLQPIRDHFATNPEA 359

Query: 350 MGLLTLIVKAGFA 362
             +L L+      
Sbjct: 360 KSILELVKSFNIT 372


>gi|322830198|gb|EFZ33303.1| tyrosyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 690

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 30/246 (12%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L ++   +  Y G++ +   +H          +        +G +
Sbjct: 19  RSVGEECIQEEELLNLITKKPNIRCYDGFEPSGR-MHIAQGVFKAVNVNKCTQ---SGCE 74

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    +++ D   +            Q  IE  K         G      + L + 
Sbjct: 75  FVFWVADWFALMND---KMCGELEKIRIVGQYLIEVWKA-------AGMNMEKVIFLWSS 124

Query: 130 TWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +      Y   + +IG   ++ R+   +      K+E +L+  +  Y ++Q  D   L
Sbjct: 125 DEITRNANSYWKTVLDIGRRNTIARI--KKCCTIMGKQEGTLTAAQILYPLMQCADIFFL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASGTKMGKTLSGA 244
                  +   G DQ    +   +  + +    K   L+  +L        KM K+   +
Sbjct: 183 K----ADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLSGLKEGQPKMSKSDPDS 238

Query: 245 IWLNKE 250
               ++
Sbjct: 239 AIFMED 244


>gi|73540207|ref|YP_294727.1| tryptophanyl-tRNA synthetase II [Ralstonia eutropha JMP134]
 gi|72117620|gb|AAZ59883.1| tryptophanyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 366

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 61/218 (27%), Gaps = 27/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 42  PTGP-LHLGHYVGSLKTRVQLQDT-HEQYLLLADTQAM---------TDNAHDPDKVRRN 90

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     KT   + +    L  +  + L     S    N  +  E     
Sbjct: 91  VLEV-ALDYLAVGIDPTKTTITVQSYLPALAELTLMYLNFVTVSRLERNPTIKEEIQARG 149

Query: 163 LKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDLGE 214
             R+    F    Y   QA D                    Q     +  N   G D+ +
Sbjct: 150 FGRDIPAGF--MCYPAAQAADITAFKADIVPVGEDQAPLIEQTNEIVRRINHQVGRDVLK 207

Query: 215 RLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
             +     F     +       KM K+   AI L    
Sbjct: 208 ECQALIPKFGRLPGV---DGKAKMSKSQGNAIALGASP 242


>gi|71657803|ref|XP_817411.1| tyrosyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70882601|gb|EAN95560.1| tyrosyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 690

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 30/246 (12%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L ++   +  Y G++ +   +H          +        +G +
Sbjct: 19  RSVGEECIQEEELLNLITKKPNIRCYDGFEPSGR-MHIAQGVFKAVNVNKCTQ---SGCE 74

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    +++ D   +            Q  IE  K         G      + L + 
Sbjct: 75  FVFWVADWFALMND---KMCGELEKIRIVGQYLIEVWKA-------AGMNMEKVIFLWSS 124

Query: 130 TWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +      Y   + +IG   ++ R+   +      K+E +L+  +  Y ++Q  D   L
Sbjct: 125 DEITRNANSYWKTVLDIGRRNTIARI--KKCCTIMGKQEGTLTAAQILYPLMQCADIFFL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASGTKMGKTLSGA 244
                  +   G DQ    +   +  + +    K   L+  +L        KM K+   +
Sbjct: 183 K----ADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLSGLKEGQPKMSKSDPDS 238

Query: 245 IWLNKE 250
               ++
Sbjct: 239 AIFMED 244


>gi|93279847|pdb|2G36|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase (Ec
           6.1.1.2) (Tryptophan-Trna Ligase)(Trprs) (Tm0492) From
           Thermotoga Maritima At 2.50 A Resolution
          Length = 340

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 26/232 (11%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   +     LQ+ G++    +    ++                 ++
Sbjct: 18  GMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHAL------------TTHYDDV 64

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +  E  + +   F+  G     +++          +   L   I S   + R+ +++ +
Sbjct: 65  SKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI 124

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           +S L  +   +     Y +LQA D + + K     +   G DQ  +I    ++  R    
Sbjct: 125 KSELNYKDLSTAGFLIYPVLQAADIL-IYKAEGVPV---GEDQVYHIELTREIARRFNYL 180

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                  P+      P L    G KM K+    I L                
Sbjct: 181 YDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINLEISEKELEQTILRMMT 232


>gi|297828964|ref|XP_002882364.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328204|gb|EFH58623.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 402

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 78/243 (32%), Gaps = 15/243 (6%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +   RG      +  E LD          Y G   ++ +LH GHL   M   +LQ+   K
Sbjct: 63  VFLRRGVFFAHRDFNEILDAYEKGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEA-FK 121

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++             D+ + M ++  ++E+    +      I  G   T   + ++ 
Sbjct: 122 VPLVI----------QLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDF 171

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            ++    Y +++R          M  F         + S   ++       ++  +   K
Sbjct: 172 DYVGGAFYKNMVRVAKCVTLNKAMGIFGFSGEDHIGKLSFPPVQAVPSFPSSFPHLFPGK 231

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLSGAIW 246
           +    L     DQ        D+  RL   K   +     P L   +G       + AI+
Sbjct: 232 DNLRCLIPCAIDQDPYFRMTRDVAPRLGYSKPALIESSFFPALQGENGKMSASDPNSAIY 291

Query: 247 LNK 249
           +  
Sbjct: 292 VTD 294


>gi|253744472|gb|EET00680.1| Tryptophanyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 424

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 11/172 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  RG  +   +  +      +G  V  Y G   ++ +LH GHL   +   +LQ    K 
Sbjct: 45  MLRRGLFYAHRDFEQFLTHYEKGLPVYIYTGRGPSSDALHLGHLLPFIFTKYLQDA-FKC 103

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++      + D    DE     R    +E            I  G       +  N  
Sbjct: 104 YVVI-----QLTD----DEKFLRNRGLSYKEIDAYTAENIKDIIACGFDPEKTFIFINSQ 154

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           +L           +     ++++ +     +      +    +    +   Y
Sbjct: 155 YLGLKNRYRFSCLVDRMLPISQLRASFGFTNDANIGYAAFPPKQMLPVYSVY 206


>gi|115474797|ref|NP_001060995.1| Os08g0150800 [Oryza sativa Japonica Group]
 gi|37573038|dbj|BAC98550.1| putative tyrosyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113622964|dbj|BAF22909.1| Os08g0150800 [Oryza sativa Japonica Group]
 gi|222639916|gb|EEE68048.1| hypothetical protein OsJ_26046 [Oryza sativa Japonica Group]
          Length = 394

 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 29/247 (11%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           RG   +     EL  L  +  V   Y G++ +   +H          +  +      G K
Sbjct: 46  RGIGEECIQEDELMNLLQKKPVPICYDGFEPSGR-MHIAQGIVKTINVNKMVR---AGCK 101

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    + + +    D          I++     + +   +   G        L + 
Sbjct: 102 VKIWIADWFAQLNNKMGGD----------IKKIQTVGRYMIEIWRAAGMNLDGVEFLWSS 151

Query: 130 TWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +     +Y  L+ +I    +V R++    +  R   ++ L+  +  Y  +Q  D   L
Sbjct: 152 EEINKRANEYWPLVMDIARKNNVKRIMRCCQIMGRNDSDE-LTAAQIFYPCMQCADIFFL 210

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLT--TASGTKMGKTLSGA 244
                  +   G DQ    +   +  + + +  K   L+  +L        KM K+   +
Sbjct: 211 K----ADICQLGMDQRKVNMLAREYCDDIKRRNKPIILSHHMLPGFKEGQEKMSKSDPSS 266

Query: 245 IWLNKEM 251
               ++ 
Sbjct: 267 AIFMEDD 273


>gi|322497727|emb|CBZ32804.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 682

 Score = 49.8 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 79/270 (29%), Gaps = 24/270 (8%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L  +   +  Y G++ +   +H          +         G +
Sbjct: 11  RSVGEECIQESELRNLIEKKPLIRCYDGFEPSGR-MHIAQGIFKAVNVNKCTA---AGCE 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    +++ D                +  IE  K       K     +   + ++ 
Sbjct: 67  FVFWVADWFALMNDKVG---GELEKIRIVGRYLIEVWKAAGMDMDKVLFLWSSEEITSHA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
                  Y  ++ +IG   ++ R+    ++  + +    L+  +  Y ++Q  D   L  
Sbjct: 124 D-----TYWRMVLDIGRQNTIARIKKCCTIMGKTEGT--LTAAQVLYPLMQCCDIFFLK- 175

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                +   G DQ    +   +  + +    K   L+  +L      +   + S      
Sbjct: 176 ---ADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLAGLRRGQAKMSKSDPDSAI 232

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  +  +  R      V   A  +T 
Sbjct: 233 FMEDTEEDVARKIRQAYCPRVKQSASAITD 262


>gi|28493653|ref|NP_787814.1| tryptophanyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|39932164|sp|Q83FN1|SYW_TROWT RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|28476695|gb|AAO44783.1| tryptophanyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 335

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 74/258 (28%), Gaps = 37/258 (14%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                   G   ++  LH G+    +  F  +Q   +    ++    S+    +F     
Sbjct: 9   NKKPVVLSGIQPSSGMLHLGNYLGALKSFGRMQD-DYTTYFMLANLHSM----TFPQNPE 63

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            ++R   I+   + I             ++D    N   W            +G+     
Sbjct: 64  -VLRENTIRIAAQCIAAGIDPAKSIVFLQSDVYQHNQLAW-----------VLGNVCIFG 111

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                   + +  ++ ++S   F Y IL A D +     YD      G+DQ  ++     
Sbjct: 112 EAARMTQFKDKSGKQGNISTGLFTYPILMASDIL----LYDSAFVPVGADQKQHLELTRT 167

Query: 212 LGERLKTPKLFALTS-----------PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           L  R      +  T                     KM K+ +        + SP    + 
Sbjct: 168 LARRFNA--QYGQTFLVPQPFECSIRIYDLQDPAVKMSKSSATESGTIFLLDSPDKIVKK 225

Query: 261 WRN--IDDADVVSFAKRL 276
                 D  DV+ + +  
Sbjct: 226 IMRSVTDSEDVIGYDRET 243


>gi|125579618|gb|EAZ20764.1| hypothetical protein OsJ_36387 [Oryza sativa Japonica Group]
          Length = 408

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  E LD+         Y G   ++ +LH GHL   M   +LQ     P
Sbjct: 70  FLRRGLFFGHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVP 129

Query: 71  ISL 73
           + +
Sbjct: 130 LVI 132


>gi|161870339|ref|YP_001599509.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595892|gb|ABX73552.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|325144760|gb|EGC67053.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 336

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 83/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEIFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                +  +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNELTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|73963985|ref|XP_868542.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase
           (Tryptophan--tRNA ligase) (TrpRS) (IFP53) (hWRS) isoform
           2 [Canis familiaris]
          Length = 476

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 72/234 (30%), Gaps = 28/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 152 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   + +            I  G       + ++  ++    +   + +I  
Sbjct: 201 TDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDIKKTFIFSDLDYM--GCFYKNVVKIQK 258

Query: 147 FFSVNR------MLSFESVRSRLKREQSL--SFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             + N+          +S+    K       +   F+    Q +       +  C +   
Sbjct: 259 HVTFNQVKGIFGFTDSDSIGKWRKISFPAIQAAPSFSNSFPQIF---RDRTDIQCLIPC- 314

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 315 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 368


>gi|146418096|ref|XP_001485014.1| hypothetical protein PGUG_02743 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390487|gb|EDK38645.1| hypothetical protein PGUG_02743 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 426

 Score = 49.8 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/345 (14%), Positives = 109/345 (31%), Gaps = 36/345 (10%)

Query: 12  LSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             +RG      + R+L+ + S          Y G   ++ S+H GH+       WLQ+  
Sbjct: 74  FLKRGVFF---SERDLEKILSLYEHGEPFFLYTGRGPSSDSIHLGHMVPFEFTRWLQEVF 130

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALML 126
             P+ +    T         D+ + + + +   E+++   +      I  G    +  + 
Sbjct: 131 DVPLVI--ELT---------DDEKFLFKPKLTIEDVKGFARTNAKDIIAVGFKPENTFIF 179

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++  ++    Y +++R      +      F    S    +   + ++       ++  V 
Sbjct: 180 SDLEYMNGPFYENVVRTSRQITTSTAKAVFGFQDSDCIGKLHFASVQIATAFPSSFPDVL 239

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
                   L     DQ        D+ ++LK  K   + A   P L  AS        + 
Sbjct: 240 GLPAKTPCLIPCAIDQDPYFRVCRDVADKLKFTKPSLIHAKFFPALQGASTKMSASDTTT 299

Query: 244 AIWLNKEMT------SPYNFWQYWRNIDDAD-------VVSFAKRLTTLPMSEIDRMAKL 290
           +I++           + Y F      I++         +    + L+     +       
Sbjct: 300 SIFMGDTPNQIKKKINKYAFSGGKATIEEHREVGGDPDIDVAFQYLSFFSYDDEKLQKLA 359

Query: 291 QGKEINEAKK-IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            G    E     +  E  +++     A +A  AA+   +     +
Sbjct: 360 DGYRKGEVLSGEMKQECISVIQDFVAAYQARRAAITEEETDQFMK 404


>gi|295101325|emb|CBK98870.1| tryptophanyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 362

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 70/234 (29%), Gaps = 31/234 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 20  PTGR-LHVGHYVGSLKERVRLQNSGKFDEIYIMIADAQAL---------TDNADNPEKVR 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G     A +        L  + +  +     S    N  +  E 
Sbjct: 70  QNV---LQVALDYLAVGIDPAKAHIFIQSMVPELTELSFYYMNLVTVSRLQRNPTVKAEI 126

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGI 210
            +   +    + F  F Y I QA D                    Q        N + G 
Sbjct: 127 QQKNFESSIPVGF--FTYPISQAADITAFKATTVPAGEDQRPMIEQCCEIVHKFNAVYGE 184

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            L E        +    L  T    KM K+L   I+L+     P +  +   ++
Sbjct: 185 TLVEPEIVLPQNSACLRLPGTDGKAKMSKSLGNCIYLS---DEPEDIKKKIMSM 235


>gi|224110028|ref|XP_002315391.1| predicted protein [Populus trichocarpa]
 gi|222864431|gb|EEF01562.1| predicted protein [Populus trichocarpa]
          Length = 345

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 83/243 (34%), Gaps = 21/243 (8%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L  +  +   Y G++ +   +H   G +  + +   L K G K  
Sbjct: 11  RSVGEECIQEDELRNLLEKKPLPICYDGFEPSGR-MHIAQGVMKTINVNK-LTKAGCKMK 68

Query: 72  SLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             +    + + +    D +  + +    I+        I    +++     +     +E 
Sbjct: 69  IWIADWFAQLNNKMGGDLKKIKTVGEYLIEIWKAVGMDIDGDKVEFLWSSDEINSRAHEY 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W        L+ +I     + R++    +  R ++++ L+  +  Y  +Q  D   L   
Sbjct: 129 W-------PLVMDIARRNKLPRIMRCVQIMGRSEQDE-LTAAQIFYPCMQCADIFFLK-- 178

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAIWL 247
               +   G DQ    +   +  + +K   K   L+  +L        KM K+   +   
Sbjct: 179 --ADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIF 236

Query: 248 NKE 250
            ++
Sbjct: 237 MED 239


>gi|163839058|ref|YP_001623463.1| tryptophanyl-tRNA synthetase [Renibacterium salmoninarum ATCC
           33209]
 gi|162952534|gb|ABY22049.1| tryptophanyl-tRNA synthetase [Renibacterium salmoninarum ATCC
           33209]
          Length = 343

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +A SLH G+    L+    +Q+  +  I ++    +             +   Q+ 
Sbjct: 12  GMQPSADSLHLGNYLGALVQWRKMQEE-YDAIYMIVDLHA-------------ITVPQDP 57

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
               ++ +   + ++  G       +          +   +L  +  F   +RM  F+  
Sbjct: 58  GVLAQRTRVTAAQYLAGGIDVEKCTLFVQSHVPEHTQLAWVLNCLTGFGEASRMTQFKD- 116

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           +S  +   + S   F Y ILQA D + L +     +   G DQ  ++    DL +R    
Sbjct: 117 KSLKQGSDTASVGLFTYPILQAADIL-LYQPEGVPV---GEDQRQHVELSRDLAKRFNHR 172

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +    +   S           KM K+      L   +  P    +  ++
Sbjct: 173 FGETFVVPQAFIQKESAKIQDLQNPSAKMSKSADSPNGLINLLDDPKVTAKRIKS 227


>gi|147832996|emb|CAN66126.1| hypothetical protein VITISV_027725 [Vitis vinifera]
          Length = 399

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           I   RG      +  E LD          Y G   ++ +LH GHL   M   +LQ     
Sbjct: 60  IFLRRGVFFAHRDLNEVLDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKV 119

Query: 70  PISL 73
           P+ +
Sbjct: 120 PLVI 123


>gi|308805238|ref|XP_003079931.1| probable tyrosine-tRNA ligase (ISS) [Ostreococcus tauri]
 gi|116058388|emb|CAL53577.1| probable tyrosine-tRNA ligase (ISS) [Ostreococcus tauri]
          Length = 396

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 82/240 (34%), Gaps = 25/240 (10%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +   P EL  L  +  V   Y G++ +   +H   G +  L +   L K G K    + 
Sbjct: 43  EECVQPDELRKLLEKKPVPVCYDGFEPSGR-MHIAQGVMKALNVNK-LTKIGCKFKFWVA 100

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ +    D  +       +   +E  K I       G    +   + +   + S 
Sbjct: 101 DWFALMNNKMGGDLKKIQKVGAYM---VEVWKAI-------GMDLENVEFVWSSEEINSR 150

Query: 136 --KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
             +Y  L+ +I     + R+L    +  R + ++ LS  +  Y  +Q  D   L      
Sbjct: 151 AGEYWPLVLDIARKNKLARILRCSQIMGRSESDE-LSASQIFYPCMQCADIFFL----GA 205

Query: 194 RLQMGGSDQWGNIICGIDL---GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            +   G DQ    +   +     +R   P + +    +       KM K+   +    ++
Sbjct: 206 DICQLGMDQRKVNMLAREYCDDIKRKNKPIILSHHMLMGLKQGQEKMSKSDPDSAIFMED 265


>gi|148653750|ref|YP_001280843.1| tryptophanyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148572834|gb|ABQ94893.1| tryptophanyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 365

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 108/385 (28%), Gaps = 50/385 (12%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM--LLFWLQKTGH---KPI 71
            + Q ++                 G   T    H G+    +   +   Q + +   +  
Sbjct: 2   TVEQNTSEHA-QKAEDTQPKRILTGVTTTGIP-HLGNYVGAIRPAIQSAQNSLNEEDQSF 59

Query: 72  SLMGGGTSIIG--DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
             +     II   DP    +             +                ++D   +   
Sbjct: 60  FFLADYHGIIKCYDP----KQIHESTKAIAATWLACG---LDPEKVVFYRQSDVPEIPEL 112

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W+ +      L      +     ++ E  +S +  +Q ++   F Y +L A D +    
Sbjct: 113 AWILNCSCPKGLMNRAHAYKAAVDINNE--KSDVDPDQGITMGLFGYPVLMAADILMFNA 170

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKT 240
            +       G DQ  +I    D+            T P         LLT   G KM K+
Sbjct: 171 TH----VPVGRDQIQHIEMARDIAGTFNHKYKSLFTLPSAVVDENVALLTGLDGRKMSKS 226

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
               I L  E     +         +  +     ++ T   +  +             K 
Sbjct: 227 YGNTIPLFGEYNPQVD--------PEKQMRKAIMQIVTNSQAPEEPKNPDDSVIFEIYKA 278

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
             +TE    +  + EA  A   A +     I+S+  P      + ++    L  +++  G
Sbjct: 279 FGSTEEIADLRAQFEAGIAWGDAKQILFEKINSEIAPFRERYFELMANPKELEEILLM-G 337

Query: 361 FAT----STNEA---RRHLKSNAIK 378
                  S  +    RR +    IK
Sbjct: 338 AEKARRHSRKQLDKTRRAI---GIK 359


>gi|84515287|ref|ZP_01002649.1| RNA pseudouridylate synthase family protein [Loktanella
           vestfoldensis SKA53]
 gi|84510570|gb|EAQ07025.1| RNA pseudouridylate synthase family protein [Loktanella
           vestfoldensis SKA53]
          Length = 272

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++  +G  +  ++ +AG   S  +A R +    + +N  +I++  L +   D  
Sbjct: 2   SNDTPQGDRIAKVLSRAG-VASRRDAERMITEGRVSVNGKVITSPALNVTDADRI 55


>gi|227549941|ref|ZP_03979990.1| tryptophanyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227077957|gb|EEI15920.1| tryptophanyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 336

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 33/256 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                 G   TA S H G+    +     LQ  GH     +    +I  D          
Sbjct: 4   KQRVLSGIQPTADSYHLGNYLGALKQWIDLQD-GHDAFYFIPDLHAITVD---------- 52

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
               E++E   K        I  G     + +          +   +L+ +  F   +RM
Sbjct: 53  QDPAELRERTLKGCAQL---IALGIDPNVSTLFVQSHVPAHAELTWVLQCLTGFGEASRM 109

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+  ++  + +   +   F Y +L A D +     Y  +L   G DQ  ++    +L 
Sbjct: 110 TQFKD-KAAKQGQDRATVGLFTYPVLMAADIL----LYSPQLVPVGEDQRQHLELTRNLA 164

Query: 214 ERLK--TPKLFALTSPLL---------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           ER      + F +    +              TKM K+ +    L   +  P    +  +
Sbjct: 165 ERFNSRFGETFVVPEGFIPEGASKIYDLQDPTTKMSKSGANPKGLINLLDDPKTSTKRIK 224

Query: 263 N--IDDADVVSFAKRL 276
           +   D+  V+++ K  
Sbjct: 225 SAVTDNDGVIAYDKDN 240


>gi|297526319|ref|YP_003668343.1| tryptophanyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255235|gb|ADI31444.1| tryptophanyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 368

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 28/197 (14%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L  L +   V    G+  +  + H GHL  +  L +LQ+ G     ++    +       
Sbjct: 57  LQALRNGEKVAVLTGFMPSGHT-HLGHLMVIEELRFLQELGAHVKIVIADAEAY------ 109

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                  +R    +E I+      +  I +G                   Y    ++   
Sbjct: 110 ------AVRRLSRKETIKYGIEYIAHAIAWGLNPEKT-----------EFYFQTAQKTEY 152

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL----AKNYDCRLQMGGSDQ 202
           +  +       S+         +S  +    + QA D + L       Y   L   G+DQ
Sbjct: 153 YRLIQMFSRRVSMAEMEAIYGDISPGKIIASLTQAADILHLQLPEYGGYKHVLVPVGADQ 212

Query: 203 WGNIICGIDLGERLKTP 219
             ++    D+ +R  T 
Sbjct: 213 DPHLRLSRDIADRFHTE 229


>gi|297845778|ref|XP_002890770.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336612|gb|EFH67029.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 780

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 102/337 (30%), Gaps = 36/337 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLF---WLQKTGHKP 70
           R    +     EL  L ++      Y G++ +   +H      +M +     L   G + 
Sbjct: 428 RSIGEECIQEDELKNLLAKKPAPICYDGFEPSGR-MHI--AQGVMKVTNVNKLTSAGCQV 484

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    + + +    D  R  +  +  +E  +            G        L    
Sbjct: 485 KIWIADWFAQLNNKLGGDLERIRVVGEYFKEIWQAG----------GMNNDKVAFLWASD 534

Query: 131 WLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +     KY  L+ +I    ++ R+L    +  R + E  LS  +  Y  +Q  D     
Sbjct: 535 EINDKGNKYWPLVMDIARRNNLRRILRCGQIMGRSETEV-LSAAQILYPCMQCADIF--- 590

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAI 245
              +  +   G DQ    +   +    +K   K   L+  +L        KM K+   + 
Sbjct: 591 -LLEADICQLGMDQRKVNMLAREYCADIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSA 649

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
              ++  +         ++++    ++    T      ++ +  +     NE K      
Sbjct: 650 IFMEDEEA---------DVNEKINKAYCPPKTVEGNPCLEYVKYIVLPRFNEFKVESENN 700

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
                    E   A   + E     +    M  ++I+
Sbjct: 701 GGNKTFKSFEDIVADYESGEMHPEDLKKALMKALNIT 737



 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 119/390 (30%), Gaps = 63/390 (16%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA-----------------GHLTQ 56
           R    Q  +  EL  L ++      Y G++ +   +H                  G L +
Sbjct: 33  RSVGEQCIHDDELKDLLAKKAAPVCYDGFEPSGR-MHIAQEKLLLARLTLLLPWQG-LMK 90

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           ++ +  L   G +    +    + + +    D        ++I+   E  K IF +    
Sbjct: 91  ILNVNKLTSAGCRVKIWIADWFAYMNNKLGGD-------LKKIRVVGEYYKEIFQAA--- 140

Query: 117 GTGKTDALMLNNETWLC--SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
           G    +   L +   +     +Y  L+ +I    S+ ++     +   L   + LS    
Sbjct: 141 GMNSENVEFLWSSDEINARGDEYWPLVMDIACRNSLAQIKRCMPIMG-LSETEELSAAHI 199

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA- 232
            Y+ +Q  D   L    +  +   G DQ    +   D  + +K   K   L+  +L    
Sbjct: 200 LYVCMQCADTFFL----EADICQLGMDQQTVNLLARDYCDAVKRGNKPVILSHHMLLGLQ 255

Query: 233 -SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
               KM K+   +    +         +   N+           +   P  E  +   L 
Sbjct: 256 QGQKKMSKSDPSSAIFME-------DEEAEVNVKIKKAYCPPDIVEGNPCLEYVKYIILP 308

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
                        E      G    +     A +     +H + +      KD +S+ + 
Sbjct: 309 WFS------EFTVERDDKYGGNRTFKSFEDIATDYESGELHPKDL------KDALSKALN 356

Query: 352 -LLTLIVKAGFATSTNEARRHLKS-NAIKI 379
            +L  +       + + A+  LK     KI
Sbjct: 357 KILQPVRDH--FKTNSRAKNLLKQVKGYKI 384


>gi|320103412|ref|YP_004179003.1| tryptophanyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319750694|gb|ADV62454.1| tryptophanyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 327

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 81/274 (29%), Gaps = 34/274 (12%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   + + LH G+    +     LQ   +     +    ++          R     +  
Sbjct: 6   GIQPSGT-LHIGNYLGAIRQYLALQ-HDNDAFYFVADYHAL-------TSVRDAQTLRTN 56

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N+          +  G     A +          + ++L   + +   ++ +    S 
Sbjct: 57  VFNV------LVDLLALGLDPEKACVFVQSD---VPETVELSWLLTTVTPMSWLEKCVSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           + ++ +  S     F Y ILQA D +     YD  L   G DQ  ++    D+ ER    
Sbjct: 108 KDKVAQGLSADHGLFAYPILQAADIL----IYDADLVPVGQDQKQHLEITRDVAERFNQT 163

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                          T  ++    G KM K+ +  I L +E  S     +     D   V
Sbjct: 164 YRAEVFKLPQPRILPTVAVIPGTDGRKMSKSYANTIDLFEEPASILKKVKR-MVTDSKTV 222

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
                  T   M+     A        EAK    
Sbjct: 223 EEPKDPDTCSLMALYRHFADPDALAEAEAKYRAG 256


>gi|242021429|ref|XP_002431147.1| Tryptophanyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212516396|gb|EEB18409.1| Tryptophanyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 441

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 69/229 (30%), Gaps = 29/229 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    L+   S      Y G   ++ S+H GHL   +   WLQ+  + P
Sbjct: 102 LLRRGIFFSHRDMHSILNAYESGKPFYLYTGRGPSSGSMHLGHLIPFIFTKWLQEVFNVP 161

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  +++E  +         I  G       + ++  
Sbjct: 162 LVI-----------QLTDDEKFLWKDLKLEEANKLAYENAKDIIAVGFDSEKTFIFSDLD 210

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL--- 187
           +L             +   + + ++F  V+       S    +  +  +QA         
Sbjct: 211 YLG-----SCSNFYRNIVKIQKSVTFNQVKGIFGFGDSDCIGKIAFPAIQAAPSFSTSFP 265

Query: 188 AKNYDCRLQM---GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
               D ++        DQ        D+            T P L  ++
Sbjct: 266 FIFKDSKIPCLIPCAIDQDPYFRMTRDV------APKLGFTKPALLHST 308


>gi|290958020|ref|YP_003489202.1| tryptophanyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260647546|emb|CBG70651.1| tryptophanyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 337

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 81/256 (31%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +   +    G   TA S H G+    +     LQ++ H    ++    +I         
Sbjct: 1   MASDRLRVLSGIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHAIT-------- 51

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                   +++ N         +    G       +          +   ++  +  F  
Sbjct: 52  --IAQDPADLRANTRLAVAQLLAA---GLDPERCTLFVQSHVPEHAQLAWVMNCLTGFGE 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S  +     S   F Y ILQ  D + L +  +  +   G DQ  +I   
Sbjct: 107 ASRMTQFKD-KSAKQGADRASVGLFTYPILQVADIL-LYQANEVPV---GEDQRQHIELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER      + F +  P +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNGRFGETFTIPKPYILKETAKIYDLQDPAIKMSKSASTPKGLINLLDDPKATA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  ++   D   V+ +
Sbjct: 222 KKVKSAVTDTDTVIRY 237


>gi|84498023|ref|ZP_00996820.1| tryptophanyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381523|gb|EAP97406.1| tryptophanyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 343

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 71/238 (29%), Gaps = 39/238 (16%)

Query: 41  GYDLTASSLHAGH----LTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   T+ SLH G+    L Q + L   Q         +    ++                
Sbjct: 19  GMQPTSDSLHLGNYLGALVQWVKL---QDE-FDAYYFVADLHAL-------------TVP 61

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            +     E+ +   + FI  G     + +          +   ++  + +     RM   
Sbjct: 62  TDPAVLRERTRKTAAQFIAGGVDPERSAVFCQSHVTEHAELGWVMNCLTADGEARRMTQ- 120

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +  + Q+ +     Y +L A D +     YD      G DQ  ++    DL  R 
Sbjct: 121 --FKDKTAKGQNANVGLLTYPMLMAADIL----MYDAAFVPVGEDQRQHLEITRDLAGRF 174

Query: 217 K--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                +   +  P +   +           KM KT S    L   M  P    +  R+
Sbjct: 175 NTRFGEALVVPEPYIVKGAAKIMDLQDPTSKMSKTGSSPKGLIDLMQEPAKIAKNIRS 232


>gi|67526841|ref|XP_661482.1| hypothetical protein AN3878.2 [Aspergillus nidulans FGSC A4]
 gi|40739953|gb|EAA59143.1| hypothetical protein AN3878.2 [Aspergillus nidulans FGSC A4]
          Length = 1490

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 15   RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            RG      +  + L           Y G   ++ SLH GH   L    WLQ 
Sbjct: 1137 RGLFFSHRDFEKILTKKEKGEPFFLYTGRGPSSGSLHLGHTIPLTFTKWLQD 1188


>gi|1212808|emb|CAA65245.1| tyrosyl-tRNA synthetase [Bos taurus]
          Length = 196

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 51/188 (27%), Gaps = 18/188 (9%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
             +L  +  +  +  Y G   T    H  +   +  +    K G +   L     + +  
Sbjct: 8   EEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADLHAYL-- 64

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLR 142
                          ++      + +  + ++  G        +    +  S +Y   + 
Sbjct: 65  ------DNMKAPWDVLELRTSYYENVIKAMLESIGVPLEKLRFIKGTDYQLSKEYTLDVY 118

Query: 143 EIGSFFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
            + S  + +        V  +++           Y  LQA D   L        Q GG D
Sbjct: 119 RLSSVVTQHDAKKAGAEVVKQVEHPL---LSGLLYPGLQALDEEYLK----VDAQFGGVD 171

Query: 202 QWGNIICG 209
           Q       
Sbjct: 172 QRKIFTFA 179


>gi|20093836|ref|NP_613683.1| RNA-binding protein [Methanopyrus kandleri AV19]
 gi|19886762|gb|AAM01613.1| Predicted RNA-binding protein containing the S4 domain
           [Methanopyrus kandleri AV19]
          Length = 79

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           G  L   +   G A S  EA+R ++S  +++N  ++      +   D      + +  
Sbjct: 4   GRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEVDGVTVRV 61


>gi|88856445|ref|ZP_01131103.1| tryptophanyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814312|gb|EAR24176.1| tryptophanyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 336

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 24/250 (9%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
              + G   +A SLH G+    LM    +Q+  +  +  +    +             + 
Sbjct: 5   PRLFSGMQPSADSLHVGNYIGALMQWREMQQN-YDAVFCVVDMHA-------------IT 50

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             QE +    + +   + +I  G     +++          +   +L  I  F   +RM 
Sbjct: 51  VPQEPELLRAQTRRTAAQYIAGGINPEHSVLFVQSQVPAHAELAWVLNTITGFGEASRMT 110

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            F+  +S  +   + S   F Y +L A D +     YD  +   G DQ  +I    DL  
Sbjct: 111 QFKD-KSAKQGSDAASVGLFTYPVLMAADIL----LYDTAIVPVGEDQRQHIELTRDLAT 165

Query: 215 RLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           R        F +  P +  A+       L        +  +      +  +         
Sbjct: 166 RFNSRFGDTFVMPEPQIQKATAKIY--DLQNPESKMSKSATTDAGVLWLLDEPSKTAKKI 223

Query: 273 AKRLTTLPMS 282
              +T     
Sbjct: 224 KSAVTDADRE 233


>gi|313112973|ref|ZP_07798616.1| tryptophan--tRNA ligase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624693|gb|EFQ08005.1| tryptophan--tRNA ligase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 353

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 27/232 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKERVRLQNSGEYDEIYVMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          KT   + +    L  + +  +     S    N  +  E   
Sbjct: 61  QNILQV-ALDYLACGIDPAKTHIFIQSMVPELTELSFYYMNLVTVSRLQRNPTVKSEIHM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDL 212
              +    + F  F Y I QA D                    Q     +  N + G  L
Sbjct: 120 RNFETSIPVGF--FCYPISQAADITAFYATTVPAGEDQKPMIEQCCEIVRKFNAVYGDTL 177

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            E        A    L  T    KM K+L   I+L++    P +  +   ++
Sbjct: 178 TEPEIVLPQNAACLRLPGTDGKAKMSKSLGNCIYLSE---EPEDIKKKVMSM 226


>gi|115433390|ref|XP_001216832.1| tryptophanyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114189684|gb|EAU31384.1| tryptophanyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 428

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 74/258 (28%), Gaps = 44/258 (17%)

Query: 12  LSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
              RG +   S+      LD          Y G   ++ ++H GH        WLQ    
Sbjct: 82  FMRRGIV--FSHRELNKILDRYEKGQPFYLYTGRGPSSDAVHLGHTVPFEFTKWLQDVFD 139

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            P+  M                       EI++     K      I  G       + ++
Sbjct: 140 CPLKYM------------------HSAKIEIEDVRRYTKANAMDIIAVGFDPKKTFIFSD 181

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             ++    Y ++         + + ++  SVR       S +  EF++   Q+      +
Sbjct: 182 FDFIGGAFYENMC-------RMAKRITINSVRGTFGFNDSNNVGEFHFCATQSAAAFATS 234

Query: 189 --------KNYDCRLQM---GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASG 234
                   +     +        DQ        +  E++K  K   + A+  P L     
Sbjct: 235 FPHIFGTDRKKVSSIPCLIPCAIDQDPYFRQCREHAEKMKYKKPSLIHAIFLPALQGPGS 294

Query: 235 TKMGKTLSGAIWLNKEMT 252
                  S A++++    
Sbjct: 295 KMSASVDSSAVFMDDTPN 312


>gi|291085419|ref|ZP_06353033.2| tryptophan--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070929|gb|EFE09038.1| tryptophan--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 373

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 65/228 (28%), Gaps = 22/228 (9%)

Query: 14  ERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           ER  +H  +     +             G   T   LH GH    +      +  ++   
Sbjct: 21  ERRLLHLKTPFGFAIKESYMNNKTIILTGDRPTGP-LHLGHYVGSLRQRAALQHDYQQFI 79

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+     +         +      Q+IQ NI ++              T   + +    L
Sbjct: 80  LVADLQGL---------TDNGSTPQKIQNNIPEVLA-DYLAAGIDPSLTTVCLQSALPAL 129

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +  + +     +    N  +  E  +    R   + F    Y I QA D         
Sbjct: 130 AELTALYMNIVTVARVERNPTVKNEIAQKGFARSLPVGF--LVYPISQAADITAFK---- 183

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             +   G DQ   I    ++  ++ +     L +P+LT         +
Sbjct: 184 AEVVPVGDDQLPMIEQTNEIVHKMNS----LLPTPVLTHCKALLSATS 227


>gi|260943091|ref|XP_002615844.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238851134|gb|EEQ40598.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 426

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 22/248 (8%)

Query: 12  LSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             +RG      + R+L  +            Y G   ++ S+H GH+   +   WLQ   
Sbjct: 74  FLKRGVFF---SERDLHRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQDVF 130

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALML 126
             P+ +    T         D+ + + + +   EN++   K      I  G    +  + 
Sbjct: 131 DVPLVI--ELT---------DDEKFLFKQKLTIENVKTFAKENSKDIIAVGFKPENTFIF 179

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++  ++    Y +++R      +      F    S    +   + ++       ++  + 
Sbjct: 180 SDLEFMNPALYENVVRTSRQITTSTAKAVFGFQDSDCIGKIHFASIQIATAFPSSFPGIL 239

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
                   L     DQ        D+ ++LK  K   + A   P L  AS        + 
Sbjct: 240 DMPPKTPCLIPCAIDQDPYFRVCRDVADKLKFSKPSLIHAKFFPALQGASTKMSASDTTT 299

Query: 244 AIWLNKEM 251
           +I+++   
Sbjct: 300 SIFMDDTP 307


>gi|304316918|ref|YP_003852063.1| tryptophanyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778420|gb|ADL68979.1| tryptophanyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 327

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/347 (12%), Positives = 103/347 (29%), Gaps = 53/347 (15%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRM 93
              + G   T   +H G+      +    K    +  +  +    ++             
Sbjct: 2   QRVFSGVQPTGD-IHIGNYLG--AMRQFVKLQNDYSCLFCIVDLHAL------------- 45

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNR 152
              Q+ +   +K   +   ++  G      ++         +     L  +    +    
Sbjct: 46  TVPQDPETLRKKSIELAGLYLAIGLDPKKVIIFVQS----HVPEHPELAWLLQCMTYFGE 101

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +      + + K ++++S   F Y  L A D +     YD      G+DQ  ++    D+
Sbjct: 102 LSRMTQFKDKSKGKETVSVGLFTYPDLMAADIL----LYDTNFVPVGNDQKQHLELTRDI 157

Query: 213 GERLK--TPKLFALTSPLLTTAS---------GTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             R      + F +  P++               KM K+          +  P    +  
Sbjct: 158 AIRFNNRFGETFVVPEPMILKTGSRIMSLTEPDKKMSKSSENQYSKINLLDEPSQIKKKI 217

Query: 262 RN--IDDADVVSFAK------------RLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
                D  +V+ +                +   +S  +  A+ +G+     KK +A  I 
Sbjct: 218 MRAVTDSENVIRYDPENKPGLSNLLTLYSSFTDISIEEAEARFKGQGYGTLKKELADVIV 277

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKDEVSRGMGLL 353
             +   +   K          +   ++   +I  ++ + V   MGLL
Sbjct: 278 ERLSEIQNNYKNLDLNYINEILKEGAEKASSIAKVTIERVKDKMGLL 324


>gi|225681156|gb|EEH19440.1| tryptophanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 465

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 57/178 (32%), Gaps = 13/178 (7%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+   +      Y G   +  +LH GH        WLQ     P+ +
Sbjct: 83  RGLFFSHRDFDHILNKYEAGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 142

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           M     + G+P+  DE      +   ++  +         I  G       + ++  ++ 
Sbjct: 143 M-----LTGEPASNDEKALFKDNLNFEDTHKFGLQNAKDIIACGFDLKKTFIFSDLDYVK 197

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               +++          +++++F  VR      +S +     +  +Q       +   
Sbjct: 198 GHFLMNVWE-------FSKLVTFNQVRGAFGFNESTNIGRIVFPAVQCAAAFATSYPE 248


>gi|303246566|ref|ZP_07332844.1| tryptophanyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491906|gb|EFL51784.1| tryptophanyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 335

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 90/309 (29%), Gaps = 40/309 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +       G   T   LH GH   ++     LQ T H+    +    ++         + 
Sbjct: 7   KENKRIVSGMRPTGP-LHLGHYFGVLKNWVALQDT-HECFFFVADWHAL---------TT 55

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                + I+  +     +   ++  G      ++          +   LL  +     + 
Sbjct: 56  EYATPKRIKGFVP---ELVKDWVAAGLDPEKCVLFQQSQIKEHAELHLLLSMVTPVSWLE 112

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           R  +++   + L  +   ++    Y +L A D +     Y       G DQ  ++    +
Sbjct: 113 RNPTYKDQLTELAAKDLATYGFLGYPVLMASDIL----IYRPGFVPVGQDQLPHMELTRE 168

Query: 212 LGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +  R               LT    L    G KM K+   +I L ++  +          
Sbjct: 169 IARRANHLYGNFFPEPQALLTPDAKLAGLDGRKMSKSYGNSIGLAEDPGTMKKKVMSMLT 228

Query: 264 IDDA------------DVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEITTMV 310
            +              ++  + + LT      EI            + KK++   +   +
Sbjct: 229 CEKRARLTDPGDPKECNLYPYHELLTDQTRLPEIVEGCTHATWGCGDCKKLLVESMAAFL 288

Query: 311 HGREEAEKA 319
               +  KA
Sbjct: 289 EPIRDRRKA 297


>gi|198427140|ref|XP_002122401.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase, cytoplasmic
           (Tryptophan--tRNA ligase) (TrpRS) [Ciona intestinalis]
          Length = 447

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 33/252 (13%)

Query: 12  LSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             +RG      + RELD + +          Y G   ++ S+H GH+   M+  +LQ+  
Sbjct: 76  FLKRGMFF---SHRELDYILTLYEQNKPFYLYTGRGPSSQSMHVGHMIPFMMTQYLQEAF 132

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + +   ++E            I  G       + +
Sbjct: 133 DVPVVV-----------QLTDDEKFLWKDLALEECYRLSYENMKDIIACGFDPDKTFIFS 181

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AY 182
           +  ++ S K         +   V + +++  V+       S    + ++  +Q     + 
Sbjct: 182 DLDYIGSCKEFYW-----NMKRVEKCVTYNQVKGIFGFGDSDCIGKISFPAIQAAPSFSS 236

Query: 183 DFVELAKNYD--CRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKM 237
            F  +         L     DQ        D+  RL+  K     ++  P L  A     
Sbjct: 237 SFPHIFNGCKDIPCLIPCAIDQDPYFRMTRDVAPRLQYRKPALLHSVFFPALQGAQTKMS 296

Query: 238 GKTLSGAIWLNK 249
               + +I+L  
Sbjct: 297 SSDPTSSIFLTD 308


>gi|301100844|ref|XP_002899511.1| tryptophanyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262103819|gb|EEY61871.1| tryptophanyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 537

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 76/255 (29%), Gaps = 15/255 (5%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG+     +    LD          Y G   ++ SLH GHL       WLQK    P+ +
Sbjct: 206 RGYFFSHRDLDVILDAYEKGEKFFLYTGRGPSSGSLHMGHLIPFTFTAWLQKVFDVPLVI 265

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         ++ + + + Q ++E+           I  G       +  N  ++ 
Sbjct: 266 -----------QLTNDEKFLFKDQTLEESEVMAWENAKDIIACGFDVKKTFIFANTDYIK 314

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS-FLEFNYMILQAYDFVELAKNYD 192
            +     + ++    + N++             +S    ++      + +  V   +   
Sbjct: 315 EMYPQ--ILKVQKCVTYNQVRGIFGFTGSDNIGKSAFPAVQAVPSFSETFPVVLGGRKGL 372

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
             L     DQ        D+  R+   K  ++ S       G+    + S A        
Sbjct: 373 RCLIPHAIDQDPYFRMTRDVAPRIGYLKPASMHSKFFPALQGSTTKMSASKASTTIYISD 432

Query: 253 SPYNFWQYWRNIDDA 267
           SP +     +    +
Sbjct: 433 SPEDIANKIKKYAFS 447


>gi|260432945|ref|ZP_05786916.1| ribosomal large subunit pseudouridine synthase B [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416773|gb|EEX10032.1| ribosomal large subunit pseudouridine synthase B [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 291

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG A S  EA R +++  + +N   I +  L +   D  
Sbjct: 27  PPGDRIAKVLARAGIA-SRREAERMIEAGRVTVNGKTIDSPALNVTPSDRI 76


>gi|317498154|ref|ZP_07956455.1| tRNA synthetase class I [Lachnospiraceae bacterium 5_1_63FAA]
 gi|291559516|emb|CBL38316.1| tryptophanyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316894509|gb|EFV16690.1| tRNA synthetase class I [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 352

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 62/200 (31%), Gaps = 26/200 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKERVRLQNSGKFDEIYIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI          + Y     D   +N        +  +L     +  +V R+    +V+
Sbjct: 61  QNI------MQVALDYLACGLDPEKVNIFIQSMVPELTELSFYYMNLVTVARVQRNPTVK 114

Query: 161 ---SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               +   E S+    F Y I QA D           +   G DQ   +    ++  +  
Sbjct: 115 AEIKQKNFEASIPVGFFTYPISQAADITAFR----ATVVPAGEDQMPMVEQCKEIVHKFN 170

Query: 218 TPKLFALTSPLLTTASGTKM 237
           +     LT P +        
Sbjct: 171 SVYGETLTDPQIVLPDNQAC 190


>gi|261392273|emb|CAX49793.1| tryptophanyl-tRNA synthetase (tryptophan--tRNA ligase; TrpRS)
           [Neisseria meningitidis 8013]
          Length = 336

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 82/334 (24%), Gaps = 38/334 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 17  HLGNYVGAIRPAVRAAQNPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+  +  I     +    +    +   +   +   + 
Sbjct: 72  CGLDPERTTFYRQSDIPEVMELNWI--LTCITAKGLMNRAHAYKAAVQANAENGQEDPDF 129

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 130 GVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEIFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                    LL    G KM K+    I L +                   V      +  
Sbjct: 186 EVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKSVNKIITNM-- 232

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 +     +       K       T           A   A +     I+++    
Sbjct: 233 --KEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEP 290

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                   +    +  ++ +AG   +  EAR  L
Sbjct: 291 RERYNALTADPSQIEEIL-QAGAQKARKEARELL 323


>gi|255636795|gb|ACU18731.1| unknown [Glycine max]
          Length = 380

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L ++      Y G++ +   +H   G +  + +   L   G +  
Sbjct: 41  RSVGEECIQEDELLNLLTKKPEPVCYDGFEPSGR-MHIAQGVMKTINVNK-LTSAGCRVK 98

Query: 72  SLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             +    + + +    D +    +    I+        + S  +++     +        
Sbjct: 99  IWIADWFAKLNNKMGGDLKKIETVGRYLIEIWKAVGMDLDSGKVEFLWSSKEINAR---- 154

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
              + +Y  L+ +I    ++ R++    +  R ++++ L+  +  Y  +Q  D   L   
Sbjct: 155 ---ADEYWPLVLDIAQKNNLKRIIRCSQIMGRSEQDE-LTAAQIFYPCMQCADIFFLK-- 208

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWL 247
               +   G DQ    +   +  +  K   K   L+  +L        KM K+   +   
Sbjct: 209 --ADICQLGMDQRKVNVLAREYCDDTKRKNKPIILSHHMLPGLQRGQEKMSKSDPSSSIF 266

Query: 248 NKE 250
            ++
Sbjct: 267 MED 269


>gi|313683273|ref|YP_004061011.1| tryptophanyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313156133|gb|ADR34811.1| tryptophanyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 321

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/315 (10%), Positives = 80/315 (25%), Gaps = 32/315 (10%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +    G   +   LH G+    +      +  H+  + +    ++    S  D  R    
Sbjct: 1   MRVLTGIQPSGD-LHIGNYFGSIKAMIESQNDHEVFAFIANYHAM---SSLSDGERLSRL 56

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           + +   +   +             ++D   +    W            +  F  +  +  
Sbjct: 57  TMQAATDFLALG--MDPQKSTFWVQSDVKEVLELYW-----------VLSGFTPMGLLER 103

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
             S + ++ +  + +   F+Y +L A D +     +   +   G DQ  ++    D+  +
Sbjct: 104 AHSYKDKVAKGIASNHSLFSYPVLMAADIL----LFGSEVIPVGKDQIQHVEIARDIAVK 159

Query: 216 LKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLN--KEMTSPYNFWQYWRNI 264
                      P          +    G KM K+    I +   +++ S          +
Sbjct: 160 FNNQYGDLFVLPEFRVDENVATVPGIDGQKMSKSYGNTIPIFSEEKIQSKIIKKIVTEAV 219

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
              +   +                +    +    K         +       E       
Sbjct: 220 PMEEPKEYENCNVYNIAKLFLDYEECAALQERYKKGGEGHGHFKLYTHDVIWEYFRPYRE 279

Query: 325 ECFDMSIHSQHMPTI 339
                  H   +  I
Sbjct: 280 RRAYFEAHQDEVREI 294


>gi|45187990|ref|NP_984213.1| ADR117Wp [Ashbya gossypii ATCC 10895]
 gi|44982807|gb|AAS52037.1| ADR117Wp [Ashbya gossypii ATCC 10895]
          Length = 426

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 73/229 (31%), Gaps = 15/229 (6%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+         Y G   ++ S+H GH+   +   WLQ+    PI +    T        
Sbjct: 90  LDLYEQGRPFFLYTGRGPSSDSMHLGHMVPFIFSKWLQEVFDVPIVI--ELT-------- 139

Query: 87  RDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
            D+ + + + +    +++   +      I  G    +  + ++  ++    Y  ++R   
Sbjct: 140 -DDEKFLFKQKLQIGDVKSFARENCKDIIAVGFKPENTFIFSDLDYMGGGFYETVVRVSR 198

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
                     F    S    +   + ++       +Y  V         L     DQ   
Sbjct: 199 QITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSYPEVLGLPPKTPCLIPCAIDQDPY 258

Query: 206 IICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                D+ ++LK  K     +   P L  ++        + AI++    
Sbjct: 259 FRVCRDVADKLKFTKPSLLHSKFFPALQGSTTKMSASDDTTAIFMTDTP 307


>gi|324999563|ref|ZP_08120675.1| tryptophanyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 338

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 77/237 (32%), Gaps = 35/237 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   TA S H G+      L     LQ+  H     +    +             +    
Sbjct: 12  GIQPTADSFHLGNYLG--ALRQWVALQE-DHDTFYCIVDLHA-------------ITVEH 55

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           + +E   + +   +  +  G     + +          +   +L  I  F    RM  F+
Sbjct: 56  DPKELARRTRVAAAQLLGLGLDPERSALFVQSHVPEHARLSWVLECITGFGEAGRMTQFK 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +S  +     +   F Y ILQA D + L +     +   G DQ  ++    +L +R  
Sbjct: 116 D-KSAKQGTDRATVGLFTYPILQAADIL-LYQPDRVPV---GEDQRQHLELTRNLAQRFN 170

Query: 218 T--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
               + F +  P +  A+           KM K+ S    + + +  P    +  R+
Sbjct: 171 HRFGETFRVPEPHIPQATAKIYDLQDPTAKMSKSASSPSGIVELLDPPKTSAKKIRS 227


>gi|290999675|ref|XP_002682405.1| tryptophanyl-tRNA synthetase [Naegleria gruberi]
 gi|284096032|gb|EFC49661.1| tryptophanyl-tRNA synthetase [Naegleria gruberi]
          Length = 434

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 20/180 (11%)

Query: 9   LSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +    +RG      +  + LD          Y G   ++ S+H GHL   M   +LQ   
Sbjct: 65  VHHFLKRGIFFSHRDMHKLLDYYEQGKPFYLYTGRGPSSESMHLGHLIPFMFTKYLQDVF 124

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + +  E++E            I  G   +   + +
Sbjct: 125 DVPLVV-----------QMTDDEKFLWKKLELEEAHRLTYENAKDIIACGFDMSKTFIFS 173

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  ++             +   + + ++   V+     E S +  +F++  +QA      
Sbjct: 174 NLDYM--------GHLYRTVLEIEKSVTCSQVKGVFGFEDSDNIGKFSFPAIQAAPSFYT 225


>gi|212540452|ref|XP_002150381.1| tryptophanyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210067680|gb|EEA21772.1| tryptophanyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 313

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 18/174 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 81  RGLFFSHRDFDKILDRYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 140

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                  + D    DE          ++  +         I  G       + +N  ++ 
Sbjct: 141 ------QLTD----DEKALFKEKLTFEDTYKFGLQNAKDIIAQGFDPKKTFIFSNLEYMG 190

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               ++            ++++F  VR      +S +     +  +Q       
Sbjct: 191 GPFLMNTWE-------FAKLVTFNQVRGAFGFNESTNIGRIMFPSVQCVASFAT 237


>gi|76800873|ref|YP_325881.1| tryptophanyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|76556738|emb|CAI48312.1| tryptophan--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 516

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 64/213 (30%), Gaps = 24/213 (11%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +   +     +     A  G+  T    H GH      L W Q+ G   
Sbjct: 64  LMRRGVIFGHRDYEPVAEAMANDEPFAALSGFMPTGDP-HIGHKLVFDELIWHQQQGGDV 122

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            +L+    +        + +R  M   EI E+ E         + +   + +    +   
Sbjct: 123 YALIADLEA--------NSAR-GMSWTEIDEHAESYLLSL-LALGFDPDEGELYRQSEND 172

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-LAK 189
            L  + +            +    +F   +     +   S      ++ Q  D +     
Sbjct: 173 ELQELAFE-----------LGAKANFSEFQGIYGFDGETSVSHMQSVVTQMADILYPQLD 221

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
                +   G DQ  ++    DL  R++  K+ 
Sbjct: 222 EPKPTVIPVGPDQDPHVRLARDLASRMRYFKVT 254


>gi|146081729|ref|XP_001464324.1| tyrosyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134068415|emb|CAM66706.1| putative tyrosyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 682

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 80/272 (29%), Gaps = 28/272 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L  +   +  Y G++ +   +H          +         G +
Sbjct: 11  RSVGEECIQESELRNLIEKKPLIRCYDGFEPSGR-MHIAQGIFKAVNVNKCTA---AGCE 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    +++ D                +  IE  K         G      L L + 
Sbjct: 67  FVFWVADWFALMNDKVG---GELEKIRIVGRYLIEVWKA-------AGMDTDKVLFLWSS 116

Query: 130 TWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             + S    Y  ++ +IG   ++ R+    ++  + +    L+  +  Y ++Q  D   L
Sbjct: 117 EEIMSHADTYWRMVLDIGRQNTIARIKKCCTIMGKTEGT--LTAAQVLYPLMQCCDIFFL 174

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
                  +   G DQ    +   +  + +    K   L+  +L      +   + S    
Sbjct: 175 K----ADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLAGLRRGQAKMSKSDPDS 230

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                 +  +  +  R      V   A  +T 
Sbjct: 231 AIFMEDTEEDVARKIRQAYCPRVKQSASAITD 262


>gi|118378144|ref|XP_001022248.1| tryptophanyl-tRNA synthetase family protein [Tetrahymena
           thermophila]
 gi|89304015|gb|EAS02003.1| tryptophanyl-tRNA synthetase family protein [Tetrahymena
           thermophila SB210]
          Length = 420

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 71/234 (30%), Gaps = 27/234 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD          Y G   +  S+H GHL   +   +LQ     P+ +       + D   
Sbjct: 90  LDNYEKGIPFYLYTGRGPSTESMHLGHLMPFIFTKYLQDAFDVPLVI------QLTD--- 140

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            DE         ++E  +         I  G       +  N  +        +     +
Sbjct: 141 -DEKFFHKGDFTLEEYQKLAIENAKDIIACGFDIEKTFIFRNTDY--------VGHMYPN 191

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAKNYDC-RLQMGGS 200
              + + +++  ++       S +  +F +  +QA       F  +  N +   L   G 
Sbjct: 192 ICKIQKAVTYNQLKGIFGVTPSDNCGKFAFPAVQAAPAISTSFPHIFGNKNVFCLIPQGI 251

Query: 201 DQWGNIICGIDLGERLKTPKLFALT---SPLLTTASGTKMGKTLSGAIWLNKEM 251
           DQ        D+  +LK PK   +     P L            + AI+L    
Sbjct: 252 DQDPYFRMTRDVQYKLKVPKTACIHSKFFPSLQGFGTKMGSTVPNSAIFLTDTP 305


>gi|170094786|ref|XP_001878614.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647068|gb|EDR11313.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 429

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 78/253 (30%), Gaps = 30/253 (11%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           I   RG           L+          Y G   ++ S+H GH+   +   WLQ     
Sbjct: 84  IFLRRGMFFSHREFDAILNRYEQGKPFFLYTGRGPSSDSMHLGHMVPFVFTKWLQDVFEV 143

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN-N 128
           P+ +                  ++   ++     E       +F +       A   N  
Sbjct: 144 PLVI------------------QLTDDEKFLFKHELKPEQTQAFSRQNARDIIACGFNLE 185

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYD 183
            T++ S           +   ++R +++  V++     +S +  + ++  +Q     +  
Sbjct: 186 RTFIFSDYQYMGGAFYQNVSKISRQITYNQVKAAFGFTESDNIGKVHFAAIQAAPSFSNS 245

Query: 184 FVELAKNYDC--RLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMG 238
           F  +         L     DQ        D+ ++LK PK   + +   P L         
Sbjct: 246 FPHIFGTISNIPCLIPCAIDQDPYFRLTRDIAQKLKYPKPALIHSKFFPALQGPQTKMSA 305

Query: 239 KTLSGAIWLNKEM 251
              + +I++  + 
Sbjct: 306 SDPNSSIFMTDKP 318


>gi|55777372|gb|AAH49526.1| Tryptophanyl-tRNA synthetase [Danio rerio]
          Length = 463

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 76/258 (29%), Gaps = 41/258 (15%)

Query: 12  LSERGFI------HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              RG        HQI     LD    Q     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 124 FLRRGIFFSHRDMHQI-----LDAFEQQKPFYLYTGRGPSSQAIHVGHLIPFIFTKWLQD 178

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
               P+ +              D+ + + +   ++E            I  G       +
Sbjct: 179 VFDVPLVI-----------QLTDDEKYLWKDLTLEECRRFTMENARDIIACGFDVNKTFI 227

Query: 126 LNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++  ++  S  +   + ++    + N+      V+       S    + ++  +QA   
Sbjct: 228 FSDLEYMGASPAFYRNVVKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPS 281

Query: 185 VEL--------AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTAS 233
                       K+  C +     DQ        D+  R+   K     +   P L  A 
Sbjct: 282 FSNSFPQIFGDRKDVQCLIPC-AIDQDPYFRMTRDVAPRIGYLKPALLHSTFFPALQGAQ 340

Query: 234 GTKMGKTLSGAIWLNKEM 251
                   +  I+L    
Sbjct: 341 TKMSASDANSTIFLTDTP 358


>gi|261368842|ref|ZP_05981725.1| S4 domain protein [Subdoligranulum variabile DSM 15176]
 gi|282569112|gb|EFB74647.1| S4 domain protein [Subdoligranulum variabile DSM 15176]
          Length = 71

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKFAGLCETGGEAKELIQGGAVKVNGEVCT 46


>gi|303285456|ref|XP_003062018.1| tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226456429|gb|EEH53730.1| tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 538

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 72/254 (28%), Gaps = 17/254 (6%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG         ++            Y G   ++ +LH GHL       WLQ    K 
Sbjct: 85  FLRRGMFFAHRELDQIVSAYERGEKFYLYTGRGPSSEALHLGHLIPFHFTKWLQDA-FKV 143

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++             D+ + + +S E+ E     +      I  G       + ++  
Sbjct: 144 PLVI----------QLTDDEKFLWKSLELSEARRLARENAKDIIACGFDPRRTFIFSDVD 193

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMILQAYDFVEL 187
           ++C+  Y++ L+ I    + N+              +     +     +     + F + 
Sbjct: 194 YMCAPFYVNTLK-IAKCVTFNQARGIFGFSGESNIGQIGFPPTQAAPAFPDCFPHLFGKC 252

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+  C +     DQ        D   R+   K   + S       G     + S     
Sbjct: 253 KKSLRCLIPC-AIDQDPYFRMTRDAAPRIGGHKPALVESRFFPALKGESGKMSASDPTSA 311

Query: 248 NKEMTSPYNFWQYW 261
                SP    +  
Sbjct: 312 IYVTDSPKQIKEKI 325


>gi|79354855|ref|NP_174157.3| ATP binding / aminoacyl-tRNA ligase/ nucleotide binding /
           tyrosine-tRNA ligase [Arabidopsis thaliana]
          Length = 776

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 101/337 (29%), Gaps = 36/337 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLF---WLQKTGHKP 70
           R    +     EL  L ++      Y G++ +   +H      +M +     L   G + 
Sbjct: 439 RSIGEECIQEDELKNLLAKKPAPICYDGFEPSGR-MHI--AQGVMKVTNVNKLTSAGCQV 495

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    + + +    D  R  +  +  +E  +            G        L    
Sbjct: 496 KIWIADWFAQLNNKLGGDLERIRVVGEYFKEIWQAG----------GMNNDKVEFLWASD 545

Query: 131 WLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +     KY  L+ +I    ++ R+L    +  R + E  LS  +  Y  +Q  D     
Sbjct: 546 EINGKGSKYWPLVMDIARRNNLRRILRCGQIMGRSETEV-LSAAQILYPCMQCADIF--- 601

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAI 245
              +  +   G DQ    +   +    +K   K   L+  +L        KM K+   + 
Sbjct: 602 -LLEADICQLGMDQRKVNMLAREYCADIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSA 660

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
              ++  +         ++++    ++    T      ++ +  +     NE K      
Sbjct: 661 IFMEDEEA---------DVNEKISKAYCPPKTVEGNPCLEYVKYIVLPRFNEFKVESEKN 711

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
                    E   A     E     +    M  ++I+
Sbjct: 712 GGNKTFNSFEDIVADYETGELHPEDLKKALMKALNIT 748


>gi|225573106|ref|ZP_03781861.1| hypothetical protein RUMHYD_01297 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039547|gb|EEG49793.1| hypothetical protein RUMHYD_01297 [Blautia hydrogenotrophica DSM
           10507]
          Length = 359

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 89/330 (26%), Gaps = 34/330 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSI---IGDPSFRDESRRMMRSQ 97
            T   LH GH    +     LQ +G   K   ++    ++     DPS   + R  +   
Sbjct: 22  PTGR-LHVGHYVGSLRGRVELQNSGEFDKVFIMIADAQALTDNFDDPS---KVRANITEV 77

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            +                    KT   + +    L  + +  +     S    N  +  E
Sbjct: 78  ALDYLACG----------LDPAKTTIFIQSQIPQLTELTFYYMNLVTLSRLERNPTVKAE 127

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVEL--------AKNYDCRLQMGGSDQWGNIICG 209
             +   ++   + F    Y + QA D                    Q     +  N + G
Sbjct: 128 IKQKNFEKSLPMGF--LTYPVSQASDITAFLADTVPVGEDQLPMIEQTREIVRSFNNLYG 185

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
             L E        A +  L  T    KM K+L   I+L  +               +   
Sbjct: 186 ETLVEPKAVLPSNAASLRLPGTDGKAKMSKSLGNCIYLADQPDEIRTKIMGMYTDPNHLK 245

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           VS     T  P+                  +          + R                
Sbjct: 246 VSDPGNTTDNPVFLYLDAFCKDEHFERYLPEYANLAELKAHYERGGLGDVKVKKFL---N 302

Query: 330 SIHSQHMPTISISKDEVSRGMG-LLTLIVK 358
           ++  + +  I   ++E ++ +  ++ L+ K
Sbjct: 303 NVLQETLEPIRTRREEFAKDIPYIMELLQK 332


>gi|301062568|ref|ZP_07203206.1| tryptophan--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443333|gb|EFK07460.1| tryptophan--tRNA ligase [delta proteobacterium NaphS2]
          Length = 327

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/346 (14%), Positives = 100/346 (28%), Gaps = 34/346 (9%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L+    LQ+   +    +    ++  D              + 
Sbjct: 9   GMRPTGK-LHLGHLRGALLNWKKLQEE-FQCFYFIADWHALTSD------------YADT 54

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +   E    I   +I  G     +            +   L         + R  +++  
Sbjct: 55  KIIKESTYEIIMDWISVGLDPEKSTFFVQSDIKEHAELYLLFSMFTPLPWLERNPTYKEQ 114

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L  +   ++    Y +LQA D + + K     +   G DQ  ++    ++  R    
Sbjct: 115 LKELSHKDLFTYGFLGYPVLQAADIL-MYKAIGVPV---GEDQAPHVELTREIARRFNH- 169

Query: 220 KLFALTSP---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            ++  T P   +L T +   +G            M+  Y    +  + D        + +
Sbjct: 170 -IYGETFPVPKVLLTPTSKLLGMDRRK-------MSKSYGNAIFLTDTDKEIDTKVGQMI 221

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME-CFDMSIHSQH 335
           T    +        +   +    +I   E T                           + 
Sbjct: 222 TDPQRARKTDPGDPEICNVFSFHEIYTDEKTCREIEEACKSAEIGCVQCKKMMAKGLKEG 281

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS--NAIKI 379
           +  I   + E+   +  +  I+  G   + + AR  +     A+KI
Sbjct: 282 LAPIRAKRKELENRLDKVKEIINDGNERARSIARETMMQVREAVKI 327


>gi|182890772|gb|AAI65344.1| Wars protein [Danio rerio]
          Length = 463

 Score = 49.0 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 76/258 (29%), Gaps = 41/258 (15%)

Query: 12  LSERGFI------HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              RG        HQI     LD    Q     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 124 FLRRGIFFSHRDMHQI-----LDAFEQQKPFYLYTGRGPSSQAIHVGHLIPFIFTKWLQD 178

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
               P+ +              D+ + + +   ++E            I  G       +
Sbjct: 179 VFDVPLVI-----------QLTDDEKYLWKDLTLEECRRFTMENARDIIACGFDVNKTFI 227

Query: 126 LNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++  ++  S  +   + ++    + N+      V+       S    + ++  +QA   
Sbjct: 228 FSDLEYMGASPAFYRNVVKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPS 281

Query: 185 VEL--------AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTAS 233
                       K+  C +     DQ        D+  R+   K     +   P L  A 
Sbjct: 282 FSNSFPQIFGDRKDVQCLIPC-AIDQDPYFRMTRDVAPRIGYLKPALLHSTFFPALQGAQ 340

Query: 234 GTKMGKTLSGAIWLNKEM 251
                   +  I+L    
Sbjct: 341 TKMSASDANSTIFLTDTP 358


>gi|308162177|gb|EFO64586.1| Tyrosyl-tRNA synthetase [Giardia lamblia P15]
          Length = 387

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 77/250 (30%), Gaps = 27/250 (10%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC---SQGVVTAYIGYDLTASSLHA--GHLTQLML 59
           K   L  L++      I  P EL  L        +T Y G++ +   +H   G    + +
Sbjct: 15  KQHLLEKLAD-----DIMCPEELHALLHADESKRLTCYDGFEPSGR-IHIAQGIAKAINV 68

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
              L ++G   +  +    + + +    +    + +    ++          S  + + T
Sbjct: 69  -NRLLRSGIDCVFYVADWFAALNNKCDAELSKIQTLGRYFVEVWKACGMLGVSKPVVFST 127

Query: 119 GKTD-ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES---VRSRLKREQSLSFLEF 174
           G+T     +    ++        +R +    S            +      +Q +S  + 
Sbjct: 128 GQTASVRFVWASEFIRQNSSSYWMRVMNIARSFTVPRMQRCSTIMGRTEGDDQPIS--QI 185

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER----LKTPKLFALTSPLLT 230
            Y  +Q  D  EL       +   G DQ        D  ++         +  +   LL 
Sbjct: 186 LYPSMQCADIFELK----LDMVEMGLDQRKVNALARDYCDKSAELKYHKPVILMHHMLLG 241

Query: 231 TASGTKMGKT 240
                KM K+
Sbjct: 242 LVGDGKMSKS 251


>gi|302865265|ref|YP_003833902.1| tryptophanyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315501809|ref|YP_004080696.1| tryptophanyl-tRNA synthetase [Micromonospora sp. L5]
 gi|302568124|gb|ADL44326.1| tryptophanyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315408428|gb|ADU06545.1| tryptophanyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 341

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 39/245 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIG--DPSFRDE 89
               + G   TA S H G+      L     LQ + H     +    +I    DP     
Sbjct: 7   RPRVFSGIQPTADSFHLGNYLG--ALRHWVALQDS-HDAYYCVVDLHAITAGHDP----- 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
              +++ +      +               ++     +   W        +L  I  F  
Sbjct: 59  --LVLKRRSRLAAAQLFALGLDPERSTLFVQSQVPEHSQLAW--------VLGCITGFGE 108

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
             RM  F+  +S+ +  +  S   F Y ILQA D + L +     +   G DQ  ++   
Sbjct: 109 AGRMTQFKD-KSQKQGSERASVGLFTYPILQAADIL-LYQANAVPV---GEDQRQHLELS 163

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL +R      + F + SP +   +           KM K+ S    +   +  P    
Sbjct: 164 RDLAQRFNSLFGRTFTVPSPHIVKDTAKITDLQDPTAKMSKSSSSPAGIIDLLEDPARSA 223

Query: 259 QYWRN 263
           +  R+
Sbjct: 224 KKIRS 228


>gi|331695770|ref|YP_004332009.1| tryptophanyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950459|gb|AEA24156.1| tryptophanyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 346

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 71/219 (32%), Gaps = 29/219 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GHL   ++    LQ++G + + ++               + R +     +  
Sbjct: 33  PTGP-LHLGHLLGTIVERVRLQRSGVEIMVILADYQV---------TTDRDVAVHLREYV 82

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              +    ++ +      T   + +    L  +    L     +    N  +  E     
Sbjct: 83  RGAVLDQLAAGLDPQ--ATTFFVHSAVPALNQLLLPFLSLVSEAELHRNPTVRAE----H 136

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPK 220
               ++LS L   Y + QA D +         L   G DQ  ++     +  R   +   
Sbjct: 137 ELSGRALSGLMLTYPVHQAADIL----FCKADLVPVGKDQLPHVELTRVIARRFAERYGP 192

Query: 221 LFALTSPLLTTA------SGTKMGKTLSGAIWLNKEMTS 253
            F +  P+LT A       G KM K+   AI L+     
Sbjct: 193 AFGVPEPMLTDAPDIPGLDGQKMSKSRGNAIGLDSTADE 231


>gi|320008983|gb|ADW03833.1| tryptophanyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 337

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 77/256 (30%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ++ H    ++    + I  P    E
Sbjct: 1   MASDRPRVLSGIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHA-ITVPQDPKE 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A       W+ +      L   G    
Sbjct: 59  LRANTRLAAAQLLAAGLDPERCTLFVQSHVPEHA----QLGWIMN-----CLTGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S  +     +   F Y +LQ  D + L +     +   G DQ  +I   
Sbjct: 110 MTQFKD----KSAKQGADRATVGLFTYPVLQVADIL-LYQANQVPV---GEDQRQHIELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER        F + +P +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNSRFGPTFTVPAPYILKETAKIFDLQDPAIKMSKSASTPKGLINLLDDPKVTA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  R+   D   V+ +
Sbjct: 222 KKVRSAVTDTDTVIRY 237


>gi|327293942|ref|XP_003231667.1| tryptophanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466295|gb|EGD91748.1| tryptophanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 437

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GH   L    WLQ     P+ +
Sbjct: 80  RGLFFSHRDFDKILDKYEYGEPFFLYTGRGPSSDALHLGHTIPLTFTKWLQDVFDVPLVI 139

Query: 74  M 74
           M
Sbjct: 140 M 140


>gi|254570521|ref|XP_002492370.1| Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates
           tryptophanyl-tRNA [Pichia pastoris GS115]
 gi|238032168|emb|CAY70123.1| Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates
           tryptophanyl-tRNA [Pichia pastoris GS115]
 gi|328353615|emb|CCA40013.1| tryptophanyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 407

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 72/228 (31%), Gaps = 13/228 (5%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+   +     Y G   ++ S+H GH+   +   WLQ     P+ +       + D   
Sbjct: 88  LDLYEKKQPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQDVFDVPLVI------QLTD--- 138

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            DE         I++  +  K      I  G       + +N  ++    Y +++R    
Sbjct: 139 -DEKFLFKPKLTIEDVKQFSKDNAKDIIAVGFDPKKTFIFSNLEYISGGFYENVVRISRQ 197

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
             +      F    S    +   + ++       ++  V         L     DQ    
Sbjct: 198 ITTSTAKSVFGFGDSDCVGKMHFASIQIAPSFPSSFPDVLDLPPTAPALIPCAIDQDPYF 257

Query: 207 ICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
               D+ E+LK  K     +   P L  AS        + AI++    
Sbjct: 258 RVSRDVAEKLKFSKPALLHSKFFPALQGASSKMSASDTNTAIFMTDTP 305


>gi|119190081|ref|XP_001245647.1| hypothetical protein CIMG_05088 [Coccidioides immitis RS]
          Length = 490

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 55/178 (30%), Gaps = 18/178 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 126 RGLFFSHRDFDKILDKYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 185

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 ++ D    DE      +   ++  +         I  G       + ++  ++ 
Sbjct: 186 ------MLTD----DEKALFKDNLTFEDTYKFGLQNAKDIIACGFDPKKTFIFSDLDYVK 235

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               +++           ++++F  VR      +S +     +  +Q       +   
Sbjct: 236 GHMLMNVWE-------FAKLITFNQVRGAFGFNESTNIGRIMFPSVQCVASFATSYPE 286


>gi|320583528|gb|EFW97741.1| tryptophanyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 422

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 71/229 (31%), Gaps = 15/229 (6%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL-MGGGTSIIGDPS 85
           LD+         Y G   ++ S+H GH+       WLQ     P+ + +           
Sbjct: 86  LDLYEHGEPFFLYTGRGPSSDSMHLGHMIPFTFTKWLQDVFDVPLIIELTD--------- 136

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             DE     +   I++  +  K      I  G    +  + ++  ++ S  Y  ++R   
Sbjct: 137 --DEKFLFKQKLTIEDVKKFAKENAKDIISVGFKPENTFIFSDLEYMNSAFYETVVRVSR 194

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              +      F    S    +   + ++       ++  V         L     DQ   
Sbjct: 195 QITTSTAKAVFGFQDSDCIGKLHFASVQIATAFPSSFPDVLGLPPKTPCLIPCAIDQDPY 254

Query: 206 IICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                D+ ++LK  K   + +   P L   +        + AI++    
Sbjct: 255 FRVCRDVADKLKFSKPSLVHSRFFPALQGPTTKMSASDENSAIFMTDTP 303


>gi|269128399|ref|YP_003301769.1| tryptophanyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313357|gb|ACY99731.1| tryptophanyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 345

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 72/240 (30%), Gaps = 34/240 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   TA S H G+      L     LQ T H+    +    +             +    
Sbjct: 12  GIQPTADSFHLGNYLG--ALRQWVALQDT-HEAFYCVVDLHA-------------ITVEH 55

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +      + +   +  +  G     A +          +   +L  +  F   +RM  F+
Sbjct: 56  DPAALRRRSRVAAAQLLAMGVDPDRAAVFVQSHVPEHTELAWVLGCLTGFGEASRMTQFK 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDF--VELAKNYDCRLQM-GGSDQWGNIICGIDLGE 214
             +S      + +   F Y IL A D             LQ+  G DQ  ++    DL +
Sbjct: 116 D-KSAKYGASATTVGLFTYPILMAADILLYTPEPGEGQVLQVPVGEDQRQHLELTRDLAQ 174

Query: 215 RLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R      + F L +  +   +           KM K+ S    + + +  P    +    
Sbjct: 175 RFNHRFGETFVLPTAYIPEDAAKITDLQEPTVKMSKSASSPQGIVEVLEQPSTMRKKIMR 234


>gi|225446410|ref|XP_002275626.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302143316|emb|CBI21877.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +   RG      +  E LD          Y G   ++ +LH GHL   M   +LQ     
Sbjct: 60  VFLRRGVFFAHRDLNEVLDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKV 119

Query: 70  PISL 73
           P+ +
Sbjct: 120 PLVI 123


>gi|259481556|tpe|CBF75186.1| TPA: tryptophanyl-tRNA synthetase (AFU_orthologue; AFUA_2G01640)
           [Aspergillus nidulans FGSC A4]
          Length = 424

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +  + L           Y G   ++ SLH GH   L    WLQ 
Sbjct: 71  RGLFFSHRDFEKILTKKEKGEPFFLYTGRGPSSGSLHLGHTIPLTFTKWLQD 122


>gi|302407045|ref|XP_003001358.1| tryptophanyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261359865|gb|EEY22293.1| tryptophanyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 479

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 71/250 (28%), Gaps = 20/250 (8%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG +    +    LD    +     Y G   ++ S+H GH+    L  WL      P
Sbjct: 80  LLRRGVVFSHRDLDLILDRYEKKLPFFIYTGRGPSSDSMHIGHVIPFTLTKWLSDVLDAP 139

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE-KIKGIFSSFIKYGTGKTDALMLNNE 129
           + +M             D+ + +   +   E ++   K      +  G       + N+ 
Sbjct: 140 LVIM-----------MTDDEKFLFSEKRTVEEVKGYTKSNAKDILAIGFNPDRTFLFNDY 188

Query: 130 TWLCSIKYIDLLREIGSF--FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            ++    Y  + +        + N    F+            +   F       +   E 
Sbjct: 189 DYVGGKFYETISKVSKRITVNTANAAFGFDG-----SSSIGKASASFAPSFPHIFGADEA 243

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +    L     DQ        D+ + LK  K   + S  L    G     + S A   
Sbjct: 244 RSSQIPCLIPCAIDQDPYFRLTRDISQGLKYAKPSLIHSRFLDALQGPGSKMSASVASSA 303

Query: 248 NKEMTSPYNF 257
                +P   
Sbjct: 304 IFMFDTPKQI 313


>gi|50303855|ref|XP_451874.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641006|emb|CAH02267.1| KLLA0B07733p [Kluyveromyces lactis]
          Length = 432

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 74/229 (32%), Gaps = 15/229 (6%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+         Y G   ++ S+H GH+   +   WLQ     P+ +    T        
Sbjct: 91  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFIFTKWLQDVFDCPLVI--ELT-------- 140

Query: 87  RDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
            D+ + + + +   ++++K  K      +  G       + ++  ++    Y  ++R   
Sbjct: 141 -DDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPEKTFIFSDLEYMGGGFYETVVRISR 199

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
                     F    S    +   + ++       ++  V    +    L     DQ   
Sbjct: 200 QITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSFPDVLGLPDKTPCLIPCAIDQDPY 259

Query: 206 IICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                D+ ++LK  K     +   P L  +S        + AI++    
Sbjct: 260 FRVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAIFMTDTP 308


>gi|50546385|ref|XP_500662.1| YALI0B08943p [Yarrowia lipolytica]
 gi|49646528|emb|CAG82904.1| YALI0B08943p [Yarrowia lipolytica]
          Length = 438

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 78/247 (31%), Gaps = 22/247 (8%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           I  +RG      +  + LD          Y G   ++ S+H GH+T  +   WLQ     
Sbjct: 80  IFLKRGVFFSERDLTKILDRYEQGKPFFLYTGRGPSSDSMHLGHMTPFVFTKWLQDVFDV 139

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK----GIFSSFIKYGTGKTDALM 125
           P+ +              + +       + +  IE +K          I  G       +
Sbjct: 140 PLVI--------------ELTDDEKFLFKPKLKIEDVKKFAVENAKDIIACGFDMNKTFI 185

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            ++  ++    Y +++R      +      F    S    +   + ++       ++  +
Sbjct: 186 FSDLQYMGGPFYENVVRVSRQITTSTAKAVFGFQDSDCIGKVHFASIQIATAFSNSFPTI 245

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
              K     L     DQ        D+  +LK PK   + A   P L  ++        +
Sbjct: 246 FGDKKDIPCLIPCAIDQDPYFRVCRDVASKLKYPKPSLIHAKFFPALQGSTTKMSASDDT 305

Query: 243 GAIWLNK 249
            AI++  
Sbjct: 306 SAIFMTD 312


>gi|229821438|ref|YP_002882964.1| tryptophanyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229567351|gb|ACQ81202.1| tryptophanyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 344

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 22/186 (11%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           G    + G   TA SLH G+    +   W  LQ T H  I  +    ++           
Sbjct: 8   GRPRVFSGMQPTADSLHLGNYLGALT-QWVALQDT-HDAIYCVVDLHAL----------- 54

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
               + +     E+ +   + ++  G     +++          +   +L  +  +    
Sbjct: 55  --TVAPDPAVLRERTRRTAAQYLAAGVDPARSVLFVQSHVAEHAELAWVLGCLTGYGEAA 112

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +  +  +   F Y +L A D +     Y   +   G DQ  ++    D
Sbjct: 113 RMTQFKD-KSAKQGAEGTTVGLFTYPVLMAADIL----LYRTNVVPVGEDQRQHLELSRD 167

Query: 212 LGERLK 217
           L +R+ 
Sbjct: 168 LAQRMN 173


>gi|148686750|gb|EDL18697.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
 gi|148686751|gb|EDL18698.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
 gi|148686752|gb|EDL18699.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 200

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI 197


>gi|239943728|ref|ZP_04695665.1| tryptophanyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239990177|ref|ZP_04710841.1| tryptophanyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291447188|ref|ZP_06586578.1| tryptophanyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL
           15998]
 gi|291350135|gb|EFE77039.1| tryptophanyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL
           15998]
          Length = 355

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 80/248 (32%), Gaps = 33/248 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ++ H    ++    +I                 E+
Sbjct: 29  GIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHAIT----------VPQDPAEL 77

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N         +    G       +          +   ++  +  F   +RM  F+  
Sbjct: 78  RANTRLAVAQLLAA---GLDPERCTLFVQSHVPEHAQLGWVMNCLTGFGEASRMTQFKD- 133

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +S  +     +   F Y +LQ  D + L +     +   G DQ  +I    DL ER    
Sbjct: 134 KSAKQGADRATVGLFTYPVLQVADIL-LYQANQVPV---GEDQRQHIELTRDLAERFNGR 189

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN--IDD 266
             + F + +P +   +           KM K+ S    L   +  P    +  ++   D 
Sbjct: 190 YGQTFTVPAPYILKETAKIFDLQDPAVKMSKSASTPKGLINLLDDPKVTAKKVKSAVTDT 249

Query: 267 ADVVSFAK 274
             V+ F +
Sbjct: 250 DTVIRFDE 257


>gi|71028718|ref|XP_764002.1| tyrosyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350956|gb|EAN31719.1| tyrosyl-tRNA synthetase, putative [Theileria parva]
          Length = 427

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 75/275 (27%), Gaps = 29/275 (10%)

Query: 17  FIHQISNPRELDILCSQGVVT--AYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPIS 72
              +   P EL  L  +   T  AY G++ +   +H   G L ++  +  + K G K + 
Sbjct: 88  LSEECIKPEELLNLLQKKDYTPLAYDGFEPSGR-MHIAQG-LCKVDTVNIMSKIGIKSVI 145

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            +    +++ +    D  +  +  +      +            G        L     +
Sbjct: 146 WIADWHAMLNNKFGGDLKKIRVVGEYFIHIWKAA----------GMNTDSVKFLWASDEV 195

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRS-RLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                +     +    S N        ++            +  Y  +Q  D   +    
Sbjct: 196 DKNPDLYWRLSMDISRSFNITRMKRCSQALGRTEGDDQPSAQLLYPAIQCADIFFI---- 251

Query: 192 DCRLQMGGSDQWGNIICGIDLGE-RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
              +   G DQ    +   +  E +        L+  +L      +   + S        
Sbjct: 252 GADICQLGMDQRKINVLAREYSELKKIPRSPVVLSHRMLPGLVEGQEKMSKSNPNSAIFM 311

Query: 251 MTSPYNFWQYWRN-------IDDADVVSFAKRLTT 278
             SP       +        +D   V+++   +  
Sbjct: 312 DDSPEEVSSKIKKAYCPPGVVDGNPVIAYFCFIVF 346


>gi|320032994|gb|EFW14944.1| tryptophanyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 490

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 55/178 (30%), Gaps = 18/178 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 126 RGLFFSHRDFDKILDKYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 185

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 ++ D    DE      +   ++  +         I  G       + ++  ++ 
Sbjct: 186 ------MLTD----DEKALFKDNLTFEDTYKFGLQNAKDIIACGFDPKKTFIFSDLDYVK 235

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               +++           ++++F  VR      +S +     +  +Q       +   
Sbjct: 236 GHMLMNVWE-------FAKLITFNQVRGAFGFNESTNIGRIMFPSVQCVASFATSYPE 286


>gi|302558865|ref|ZP_07311207.1| tryptophanyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302476483|gb|EFL39576.1| tryptophanyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 337

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 78/256 (30%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ+T H    ++    + I  P   D 
Sbjct: 1   MATDRPRVLSGIQPTAGSFHLGNYLGAVRQWVALQET-HDAFYMVVDLHA-ITLPQDPDV 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A +            ++ L   G    
Sbjct: 59  LRANTRLAAAQLLAAGLDPDRCTLFVQSHVPEHAQLAW---------VMNCLTGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S  +     S   F Y ILQ  D + L +  +  +   G DQ  +I   
Sbjct: 110 MTQFKD----KSAKQGADRASVGLFTYPILQVADIL-LYQADEVPV---GEDQRQHIELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL +R      + F +  P +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLADRFNGRFGETFTMPKPYILKETAKIYDLQDPSIKMSKSASTPKGLINLLDEPRTTA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  ++   D   V+ +
Sbjct: 222 KKVKSAVTDTDTVIRY 237


>gi|118471756|ref|YP_886034.1| tryptophanyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118173043|gb|ABK73939.1| tryptophanyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 338

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 80/244 (32%), Gaps = 31/244 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
           S      + G   T+ SLH G+    +     LQ   +     +    + I  P   +  
Sbjct: 3   SGSKRVVFSGAQPTSDSLHLGNALGAVTHWAQLQD-DYDAFFCVVDLHA-ITVPQDPETL 60

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           RR      +    + +             ++     +   W        +L     F   
Sbjct: 61  RRR----TLVTAAQYLALGIDPARSTVFVQSHVPTHSQLAW--------VLGCFTGFGQA 108

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +RM  F+  +S+ +   + +   F Y +L A D +     YD  +   G DQ  ++    
Sbjct: 109 SRMTQFKD-KSQKQGADATTVGLFTYPVLMAADVL----LYDTHVVPVGEDQRQHLELAR 163

Query: 211 DLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
           DL +R     P  F +  P++  A+           KM K+ +    L   +  P    +
Sbjct: 164 DLAQRFNARFPDTFVVPEPMIPKATAKIYDLQDPTAKMSKSAATDAGLISLLDDPKATAK 223

Query: 260 YWRN 263
             R+
Sbjct: 224 KIRS 227


>gi|311977495|ref|YP_003986615.1| tyrosyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|81999898|sp|Q5UPJ7|SYY_MIMIV RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|55416749|gb|AAV50399.1| tyrosyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|308204189|gb|ADO17990.1| tyrosyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
          Length = 346

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 23/266 (8%)

Query: 19  HQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +      L  L   G + TAY G++ +   +H    L  +M    + + G + I  +  
Sbjct: 21  EECETLDRLKQLVDSGRIFTAYNGFEPSGR-IHIAQALITVMNTNNIIECGGQMIIYIAD 79

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSI 135
             + +           +  + +I +  E  +     F   G        +    ++  + 
Sbjct: 80  WFAKMN----------LKMNGDINKIRELGRYFIEVFKACGINLDGTRFIWASEFIASNP 129

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            YI+ + +I  F +++R+     +  R + +  L   +  Y  +QA D  EL       +
Sbjct: 130 SYIERMLDIAEFSTISRVKRCCQIMGRNESDC-LKASQIFYPCMQAADVFELV-PEGIDI 187

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
              G DQ    +  I+           +L+  +L + SG K   + S          +  
Sbjct: 188 CQLGIDQRKVNMLAIEYANDRGLKIPISLSHHMLMSLSGPKKKMSKSDPQGAIFMDDT-- 245

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPM 281
                 + + +    ++    T    
Sbjct: 246 -----EQEVSEKISRAYCTDETFDNP 266


>gi|41614911|ref|NP_963409.1| tryptophanyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|40068635|gb|AAR38970.1| NEQ115 [Nanoarchaeum equitans Kin4-M]
          Length = 377

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           L ER   +   +    L           Y G   +   +H GHL   +L  W Q+
Sbjct: 47  LIERNIFYAHRDLDLVLKDYEEGRGFFLYTGIAPSKGKMHIGHLVPFILTRWFQE 101


>gi|325181607|emb|CCA16057.1| ATP binding protein putative [Albugo laibachii Nc14]
          Length = 773

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 84/251 (33%), Gaps = 23/251 (9%)

Query: 13  SERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHK 69
             R    + +   EL  L S+      Y G++ +   +H   G L  + +   L  +G  
Sbjct: 438 RSRSVGQECTLEEELRALLSKKDHFVCYDGFEPSGR-MHIAQGILRSVNV-NRLTDSGAI 495

Query: 70  PISLMGGGTSIIGDPSFRDESR-RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
               +    +++ +    D  + R++    I+           + +++       +    
Sbjct: 496 FRFWVADWFALLNNKMGGDLEKIRIVGRYMIEIWKSTGMD--MTNVQFLWASDQIIANGA 553

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL        + +I    ++ R +   ++  R ++E  +   +  Y ++Q  D   L 
Sbjct: 554 SYWLR-------VMDIARRTTIARTVKCCTIMGRKEKE-GMLAAQILYPLMQCADIFFLK 605

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASGTKMGKTLSGAI 245
                 +   G DQ    +   D  + +K   K   L+  +L        KM K+   + 
Sbjct: 606 ----ADVCQLGLDQRKINMLARDYCDLVKIKFKPVILSHHMLMGLKEGQEKMSKSNPESA 661

Query: 246 WLNKEMTSPYN 256
              ++     +
Sbjct: 662 IFMEDTPEHVD 672



 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/377 (12%), Positives = 113/377 (29%), Gaps = 38/377 (10%)

Query: 8   FLSILSE-RGFIHQISNPRE-LDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
            L  LS  +G      +    L  L ++     AY G++ T     A  L +++    L 
Sbjct: 45  ILEELSTIKGPAGFSIDEENQLRDLFTKTPHPIAYDGFEPTGRFTLASGLLRVINAKRLM 104

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G      +G   +++ +    D ++  + SQ + +  + +    ++   +    + + 
Sbjct: 105 KAGCHVRFWIGDAFAMLNNKFGGDLNKGQIISQYMVQVWKALGLDSTTQENFEFLLSSSE 164

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  +       KY   + +I   FSV R+    ++  R   E   +     Y ++Q  D 
Sbjct: 165 IARHAD-----KYWSRVLDIAGQFSVERIQKCATMMGRDVDEPVCNANRILYPLMQCADS 219

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER------LKTPKLFALTSPLLTTASGTKMG 238
                  +  +   G+DQ        +   +          K F L  PLL      +  
Sbjct: 220 F----LLEADICQFGADQEEACRLNKEYIAKLEDRGDTTQKKPFFLLHPLLKGLKQDQFK 275

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPM--------SE 283
            + +          +        +        ID   ++ + K +               
Sbjct: 276 MSTTDPESAIYVDDTIAEVNSKIKRAFCPPGQIDQNPILDYMKYVVFPMFVDEGIVLERN 335

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---- 339
                    K   E +   + ++      +    K   + ++       +  +  +    
Sbjct: 336 EKNGGNRSFKSFKELENAFSEQVIHPADLKPCLSKYINSMLDPVRQHFATGDLKKLWNNV 395

Query: 340 -SISKDEVSRGMGLLTL 355
             +       G  L++L
Sbjct: 396 KKLKISSTPDGDKLVSL 412


>gi|269864865|ref|XP_002651723.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063997|gb|EED42333.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 308

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           L+++ ++     Y G   ++SS+H GH    +L  +LQ   + P+ +
Sbjct: 72  LEVIKTKKPFYIYTGRGPSSSSMHLGHTIPFLLCKYLQDVFNCPLVI 118


>gi|171186115|ref|YP_001795034.1| tryptophanyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935327|gb|ACB40588.1| tryptophanyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 377

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 3/81 (3%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK-TGHK 69
           L  RGF +   +    L           Y G   +   +H GH+   +LL W     G +
Sbjct: 51  LIRRGFFYAHRDFDAILKWHGEGKPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFGLE 109

Query: 70  PISLMGGGTSIIGDPSFRDES 90
               M        DP  + + 
Sbjct: 110 VYFQMTDDEKFYDDPDMKLDE 130


>gi|145591816|ref|YP_001153818.1| tryptophanyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166225535|sp|A4WL99|SYW_PYRAR RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|145283584|gb|ABP51166.1| tryptophanyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 374

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK-TGHK 69
           L +RGF +   +    L           Y G   +   +H GH+   +LL W     G +
Sbjct: 48  LIKRGFFYAHRDFDFILKWHGEGRPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFGVE 106

Query: 70  PISLMGGGTSIIGDPSFRDES 90
               M        DP  + E 
Sbjct: 107 VYFQMTDDEKFFDDPEMKLEE 127


>gi|84999060|ref|XP_954251.1| tryptophanyl-trna synthetase [Theileria annulata]
 gi|65305249|emb|CAI73574.1| tryptophanyl-trna synthetase, putative [Theileria annulata]
          Length = 577

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 71/234 (30%), Gaps = 16/234 (6%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            + LD          Y G   ++ +LH GHL   +   WLQK+ + P+ +      ++ D
Sbjct: 250 DQLLDNYEKGNKFFIYTGRGPSSEALHLGHLIPFIFTCWLQKSFNVPVVI------MLSD 303

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
               DE        E++             I  G       +  N  ++          +
Sbjct: 304 ----DEKFVFREELELENVRNLALENAKDIIAVGFDPELTFIFRNTDYI--QHLYKTTLK 357

Query: 144 IGSFFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           +    + N++        S      S   LE      +++  +   K     L   G DQ
Sbjct: 358 LQKKTTFNQLRGSFGFDYSTNVGMISYPLLEGAASFSESFPNLFNNKEDIMCLVPQGIDQ 417

Query: 203 WGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                    L  +L   K   + +   P L   +          AI++  +  +
Sbjct: 418 DPFFRLTRSLAPKLGLKKPALIHSKFIPSLLGVNQKMSSSIEGSAIFVTDDAET 471


>gi|316978683|gb|EFV61632.1| tyrosyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 542

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 71/253 (28%), Gaps = 22/253 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  +D    L  R    ++     L  +     V  Y G   T    H G+   +  +
Sbjct: 9   MSSLAADEKFQLITRNL-QEVLGETVLKDILKTRNVKIYWGTATTGRP-HVGYFVPMSKI 66

Query: 61  FWLQKTGHKPI--SLMGG----GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
               K   +     + G      T +  D         M    E+ +   +        +
Sbjct: 67  ADFLKADCEVFTYFIAGDEFGVVTILFAD--LHAYLDNMKAPWELLKLRTQYYETVIKLL 124

Query: 115 --KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF--ESVRSRLKREQSLS 170
               G        +    +  S +Y   +  I S  + +       E V+     E  L 
Sbjct: 125 LQTVGVPLEKLKFVRGTEFQLSREYTLDVYRISSLVTQHDSKKAGAEVVKQ---VEYPL- 180

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
                Y  LQA D   L        Q GG DQ             L   K   L +P++ 
Sbjct: 181 LSGLLYPCLQALDEEYLK----VDAQFGGVDQRKIFTFSEKYLPSLGYAKRIHLMNPMVP 236

Query: 231 TASGTKMGKTLSG 243
             +  KM  ++  
Sbjct: 237 GLTCDKMSASIED 249


>gi|29829960|ref|NP_824594.1| tryptophanyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|39932355|sp|Q82HU1|SYW1_STRAW RecName: Full=Tryptophanyl-tRNA synthetase 1; AltName:
           Full=Tryptophan--tRNA ligase 1; Short=TrpRS 1
 gi|29607070|dbj|BAC71129.1| putative tryptophanyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 337

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 78/256 (30%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ++ H    ++    + I  P    +
Sbjct: 1   MASDRPRVLSGIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHA-ITVPQDPAD 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A       W+ +      L   G    
Sbjct: 59  LRANTRLAAAQLLAAGLDPERCTLFVQSHVPEHA----QLAWIMN-----CLTGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S  +     S   F Y +LQ  D + L +  +  +   G DQ  +I   
Sbjct: 110 MTQFKD----KSAKQGADRASVGLFTYPVLQVADIL-LYQANEVPV---GEDQRQHIELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER      + F +  P +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNGRFGETFTVPKPYILKETAKIFDLQDPSIKMSKSASTPKGLINLLDEPKATA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  ++   D   V+ +
Sbjct: 222 KKVKSAVTDTDTVIRY 237


>gi|328884561|emb|CCA57800.1| Tryptophanyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 337

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 78/256 (30%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ+T H    ++    + I  P    E
Sbjct: 1   MASDSPRVLSGIQPTAGSFHLGNYLGAVRQWVALQET-HDAFYMVVDLHA-ITVPQDPAE 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A +            ++ L   G    
Sbjct: 59  LRANTRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLGW---------VMNCLTGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S  +     +   F Y ILQ  D + L +     +   G DQ  +I   
Sbjct: 110 MTQFKD----KSAKQGADRATVGLFTYPILQVADIL-LYQANQVPV---GEDQRQHIELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER      + F + +P +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNGRFGETFTIPAPYILKETAKIYDLQDPAIKMSKSASTPKGLINLLDDPKTTA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  ++   D   V+ F
Sbjct: 222 KKVKSAVTDTETVIRF 237


>gi|269864517|ref|XP_002651601.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220064223|gb|EED42455.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 375

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           L+++ ++     Y G   ++SS+H GH    +L  +LQ   + P+ +
Sbjct: 72  LEVIKTKKPFYIYTGRGPSSSSMHLGHTIPFLLCKYLQDVFNCPLVI 118


>gi|269864125|ref|XP_002651463.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220064477|gb|EED42593.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 378

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           L+++ ++     Y G   ++SS+H GH    +L  +LQ   + P+ +
Sbjct: 72  LEVIKTKKPFYIYTGRGPSSSSMHLGHTIPFLLCKYLQDVFNCPLVI 118


>gi|71032793|ref|XP_766038.1| tryptophanyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352995|gb|EAN33755.1| tryptophanyl-tRNA synthetase, putative [Theileria parva]
          Length = 579

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 71/234 (30%), Gaps = 16/234 (6%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            + LD          Y G   ++ +LH GHL   +   WLQK+ + P+ +      ++ D
Sbjct: 252 DKLLDNYEKGNKFFIYTGRGPSSEALHLGHLIPFIFTCWLQKSFNVPVVI------MLSD 305

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
               DE        E++             I  G       +  N  ++          +
Sbjct: 306 ----DEKFVFREELELENVRNLALENAKDIIAVGFDPELTFIFRNTDYI--QHLYKTTLK 359

Query: 144 IGSFFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           +    + N++        S      S   LE      +++  +   K     L   G DQ
Sbjct: 360 LQKKTTFNQLRGSFGFDYSTNVGMISYPLLEGAASFSESFPNLFNNKEDIMCLVPQGIDQ 419

Query: 203 WGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                    L  +L   K   + +   P L   +          AI++  +  +
Sbjct: 420 DPFFRLTRSLAPKLGLKKPALIHSKFIPSLLGINQKMSSSIEGSAIFVTDDAET 473


>gi|124512622|ref|XP_001349444.1| tyrosyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23499213|emb|CAD51293.1| tyrosyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 373

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 32/281 (11%)

Query: 19  HQISNPRELD-ILCSQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +   P EL   L  +  +  Y G++ +   +H   G L + +++  L   G   I  + 
Sbjct: 39  SECIQPDELRVKLLLKRKLICYDGFEPSGR-MHIAQG-LLKSIIVNKLTSNGCTFIFWIA 96

Query: 76  GGTSIIGDP-SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
              + + +  S   +  + + S  I+                G    +   L     +  
Sbjct: 97  DWFAHLNNKMSGDLKKIKKVGSYFIEVWKSC-----------GMNMENVQFLWASEEINK 145

Query: 135 IK--YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               Y  L+ +I   F++NRM     +  R + E++    +  Y  +Q  D   L    +
Sbjct: 146 KPNEYWSLVLDISRSFNINRMKRCLKIMGRSEGEENY-CSQILYPCMQCADIFFL----N 200

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFAL----TSPLLTTASGTKMGKTLSGAIWLN 248
             +   G DQ    +   +  +  K  K   +      P L            + AI+++
Sbjct: 201 VDICQLGIDQRKVNMLAREYCDIKKIKKKPVILSHGMLPGLLEGQEKMSKSDENSAIFMD 260

Query: 249 KEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEID 285
              +      +        I++  + ++AK +     +E +
Sbjct: 261 DSESDVNRKIKKAYCPPNVIENNPIYAYAKSIIFPSYNEFN 301


>gi|6560759|gb|AAF16759.1|AC010155_12 F3M18.22 [Arabidopsis thaliana]
          Length = 895

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 101/337 (29%), Gaps = 36/337 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLF---WLQKTGHKP 70
           R    +     EL  L ++      Y G++ +   +H      +M +     L   G + 
Sbjct: 487 RSIGEECIQEDELKNLLAKKPAPICYDGFEPSGR-MHI--AQGVMKVTNVNKLTSAGCQV 543

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    + + +    D  R  +  +  +E  +            G        L    
Sbjct: 544 KIWIADWFAQLNNKLGGDLERIRVVGEYFKEIWQAG----------GMNNDKVEFLWASD 593

Query: 131 WLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            +     KY  L+ +I    ++ R+L    +  R + E  LS  +  Y  +Q  D     
Sbjct: 594 EINGKGSKYWPLVMDIARRNNLRRILRCGQIMGRSETEV-LSAAQILYPCMQCADIF--- 649

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAI 245
              +  +   G DQ    +   +    +K   K   L+  +L        KM K+   + 
Sbjct: 650 -LLEADICQLGMDQRKVNMLAREYCADIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSA 708

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
              ++  +         ++++    ++    T      ++ +  +     NE K      
Sbjct: 709 IFMEDEEA---------DVNEKISKAYCPPKTVEGNPCLEYVKYIVLPRFNEFKVESEKN 759

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
                    E   A     E     +    M  ++I+
Sbjct: 760 GGNKTFNSFEDIVADYETGELHPEDLKKALMKALNIT 796


>gi|113931542|ref|NP_001039220.1| tryptophanyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|89272489|emb|CAJ82616.1| tryptophanyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|189441894|gb|AAI67428.1| LOC734080 protein [Xenopus (Silurana) tropicalis]
          Length = 475

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 76/236 (32%), Gaps = 28/236 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD    +     Y G   ++ ++H GHL   +   WLQ+  + P+ +             
Sbjct: 152 LDAYEKKQPFYLYTGRGPSSEAMHMGHLIPFIFTKWLQEVFNVPLVI-----------QL 200

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIG 145
            D+ + + +   I++  +         I  G       + ++  ++   + +   + ++ 
Sbjct: 201 TDDEKYLWKDLTIEKAYQYAVENAKDIIALGFDVNKTFIFSDLEYMGKSLGFYQNVVKVQ 260

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AYDFVELAKNYDCRLQMG 198
              + N+      V+       S    + ++  +Q       ++  +   +     L   
Sbjct: 261 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPEIFKGRKDIQCLIPC 314

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
             DQ        D+  R+  PK     +   P L  A         + +I+L    
Sbjct: 315 AIDQDPYFRMTRDVAPRISYPKPALMHSTFFPALQGAQTKMSASDPNSSIFLTDTP 370


>gi|303322577|ref|XP_003071280.1| tryptophanyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240110982|gb|EER29135.1| tryptophanyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 443

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 55/178 (30%), Gaps = 18/178 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 79  RGLFFSHRDFDKILDKYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 138

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 ++ D    DE      +   ++  +         I  G       + ++  ++ 
Sbjct: 139 ------MLTD----DEKALFKDNLTFEDTYKFGLQNAKDIIACGFDPKKTFIFSDLDYVK 188

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               +++           ++++F  VR      +S +     +  +Q       +   
Sbjct: 189 GHMLMNVWE-------FAKLITFNQVRGAFGFNESTNIGRIMFPSVQCVASFATSYPE 239


>gi|149200863|ref|ZP_01877838.1| RNA pseudouridylate synthase family protein [Roseovarius sp.
           TM1035]
 gi|149145196|gb|EDM33222.1| RNA pseudouridylate synthase family protein [Roseovarius sp.
           TM1035]
          Length = 268

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +   G  +  +I +AG A S  EA R ++   + +N   +    L +   D
Sbjct: 6   PEKKPPEGERIAKVIARAGIA-SRREAERLIEEGRVTVNGQKVLRAALNVTPAD 58


>gi|167767156|ref|ZP_02439209.1| hypothetical protein CLOSS21_01675 [Clostridium sp. SS2/1]
 gi|167711131|gb|EDS21710.1| hypothetical protein CLOSS21_01675 [Clostridium sp. SS2/1]
          Length = 385

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 62/200 (31%), Gaps = 26/200 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 44  PTGR-LHVGHYVGSLKERVRLQNSGKFDEIYIMIADAQAL---------TDNAEHPEKVR 93

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI          + Y     D   +N        +  +L     +  +V R+    +V+
Sbjct: 94  QNI------MQVALDYLACGLDPEKVNIFIQSMVPELTELSFYYMNLVTVARVQRNPTVK 147

Query: 161 ---SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               +   E S+    F Y I QA D           +   G DQ   +    ++  +  
Sbjct: 148 AEIKQKNFEASIPVGFFTYPISQAADITAFR----ATVVPAGEDQMPMVEQCKEIVHKFN 203

Query: 218 TPKLFALTSPLLTTASGTKM 237
           +     LT P +        
Sbjct: 204 SVYGETLTDPQIVLPDNQAC 223


>gi|323455177|gb|EGB11046.1| hypothetical protein AURANDRAFT_70088 [Aureococcus anophagefferens]
          Length = 417

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 76/257 (29%), Gaps = 18/257 (7%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L     RG      +  + L    +   +  Y G   +++++H GHL   ++  WLQ   
Sbjct: 45  LHRFLRRGIFFSHRDLEKILTAAETGQGLYLYTGRGPSSAAMHLGHLVPFLMTRWLQAAL 104

Query: 68  HKPISLMGGGTSIIGDPSF--RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             P+ +      +  D  F  + E        ++              I  G  K    +
Sbjct: 105 GVPLVV-----QMTDDEKFLWKGEYDEAAGDYDLDRFRALTVQNAKDIIACGFDKDRTFI 159

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            ++  ++  +            ++  R  +F    S    + +   ++        +   
Sbjct: 160 FSDVDYMGHMYPNVCKIWKSITYNTARA-AFGFEGSSNVGQSAFPAIQAAPSFPSTFKVP 218

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---------LFALTSPLLTTASGTK 236
              ++    L     DQ        D+  ++             + +   P L  A G  
Sbjct: 219 LGNRDDLACLIPCAIDQDPYFRVTRDIAHKIAPKSHPLKGKPALIHSKFFPPLQGAMGKM 278

Query: 237 MGKTLSGAIWLNKEMTS 253
                + AI+L  +  +
Sbjct: 279 SSSDDNSAIFLTDDDAT 295


>gi|41152126|ref|NP_957066.1| tryptophanyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|37590880|gb|AAH59603.1| Tryptophanyl-tRNA synthetase [Danio rerio]
          Length = 463

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 76/258 (29%), Gaps = 41/258 (15%)

Query: 12  LSERGFI------HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              RG        HQI     LD    Q     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 124 FLRRGIFFSHRDMHQI-----LDAFEQQKPFYLYTGRGPSSQAIHVGHLIPFIFTKWLQD 178

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
               P+ +              D+ + + +   ++E            I  G       +
Sbjct: 179 VFDVPLVI-----------QLTDDEKYLWKDLTLEECRRFTVENARDIIACGFDVNKTFI 227

Query: 126 LNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            ++  ++  S  +   + ++    + N+      V+       S    + ++  +QA   
Sbjct: 228 FSDLEYMGASPAFYRNVVKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPS 281

Query: 185 VEL--------AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTAS 233
                       K+  C +     DQ        D+  R+   K     +   P L  A 
Sbjct: 282 FSNSFPQIFGDRKDVQCLIPC-AIDQDPYFRMTRDVAPRIGYLKPALLHSTFFPALQGAQ 340

Query: 234 GTKMGKTLSGAIWLNKEM 251
                   +  I+L    
Sbjct: 341 TKMSASDANSTIFLTDTP 358


>gi|327399496|ref|YP_004340365.1| 30S ribosomal protein S4 [Hippea maritima DSM 10411]
 gi|327182125|gb|AEA34306.1| ribosomal protein S4 [Hippea maritima DSM 10411]
          Length = 208

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 8/66 (12%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              + +   G  L+ L+ +        +G A+S  EARR +    I++N   +      +
Sbjct: 80  EAKRQKGETGANLVVLLERRLDNVVYRSGMASSRREARRLVTHGHIRVNGHKVDIPSYLV 139

Query: 392 KLQDFD 397
           +  D  
Sbjct: 140 RKGDVI 145


>gi|290558898|gb|EFD92288.1| RNA-binding S4 domain protein [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 220

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 9/73 (12%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ +L  +      A +  EAR  +K+  + ++   +  EK  +   D        +S
Sbjct: 40  KDGVSILGFLRDVLKIAANAREARYLIKNGYVFVDGKKVIEEKYVVGFSD-------IVS 92

Query: 406 FGKKNHIICHLCG 418
             K N+ +  L G
Sbjct: 93  V-KDNYFLVWLSG 104


>gi|269861355|ref|XP_002650388.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220066174|gb|EED43670.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 388

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           L+++ ++     Y G   ++SS+H GH    +L  +LQ   + P+ +
Sbjct: 72  LEVIKTKKPFYIYTGRGPSSSSMHLGHTIPFLLCKYLQDVFNCPLVI 118


>gi|83952774|ref|ZP_00961504.1| RNA pseudouridylate synthase family protein [Roseovarius
           nubinhibens ISM]
 gi|83835909|gb|EAP75208.1| RNA pseudouridylate synthase family protein [Roseovarius
           nubinhibens ISM]
          Length = 268

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  +I +AG A S  EA R +++  + +N   I +  L +   D  
Sbjct: 6   PPGDRIAKVIARAGLA-SRREAERMVEAGRVTVNGRKIDSPALNVTPSDKI 55


>gi|114555402|ref|XP_001164353.1| PREDICTED: tyrosyl-tRNA synthetase isoform 6 [Pan troglodytes]
          Length = 501

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 2/70 (2%)

Query: 12 LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
          L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13 LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72 SLMGGGTSII 81
           L     + +
Sbjct: 71 ILFADLHAYL 80


>gi|159045330|ref|YP_001534124.1| RNA pseudouridine synthase [Dinoroseobacter shibae DFL 12]
 gi|157913090|gb|ABV94523.1| RNA pseudouridine synthase [Dinoroseobacter shibae DFL 12]
          Length = 322

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++ +    G  +  ++ +AG A S  EA R +    + +N   + +  L +   D  
Sbjct: 1   MADNTTPPGDRIAKVLARAGIA-SRREAERLIAEGRVAVNGKTVDSPALNVTEADKI 56


>gi|159477893|ref|XP_001697043.1| hypothetical protein CHLREDRAFT_192647 [Chlamydomonas reinhardtii]
 gi|158274955|gb|EDP00735.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 403

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 98/333 (29%), Gaps = 45/333 (13%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
             +RG      + +E+     +G     Y G   ++ +LH GHL   M   +LQ     P
Sbjct: 67  FLKRGIFFAHRDLQEILDCYEKGIPFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFGVP 126

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + R  +I E     +      I  G   +   + ++  
Sbjct: 127 LVI-----------QLTDDEKSLWRGLDIDEARRLARENAKDIIACGFDVSKTFIFSDFE 175

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE---- 186
           ++    Y +++        + R ++   VR         +  +  +  +QA         
Sbjct: 176 FVGGAFYRNII-------RIQRCVTMNQVRGIFGFSMEDNIGKIAFPAVQAAPSFPDCFP 228

Query: 187 ----LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGK 239
                 K+  C +     DQ        D+  R+   K   +     P L   SG     
Sbjct: 229 HMFGTRKDIRCLIPC-AIDQDPYFRMTRDVAPRIGHQKPALIESKFFPALQGESGKMSAS 287

Query: 240 TLSGAIWLNKEM------TSPYNFWQYWRNIDDADV--------VSFAKRLTTLPMSEID 285
             + AI++N          + Y F      +++           V +      +      
Sbjct: 288 DTTSAIFVNDTPAQIKDKINKYAFSGGGATVEEHRAKGANLAVDVPWKYLNFFMEDDNKL 347

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                +          I  E+ T++       +
Sbjct: 348 ARIGEEYGSGRMLTGEIKKELITVLTDMVSRHQ 380


>gi|212540450|ref|XP_002150380.1| tryptophanyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210067679|gb|EEA21771.1| tryptophanyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 447

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 18/174 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 81  RGLFFSHRDFDKILDRYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 140

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                  + D    DE          ++  +         I  G       + +N  ++ 
Sbjct: 141 ------QLTD----DEKALFKEKLTFEDTYKFGLQNAKDIIAQGFDPKKTFIFSNLEYMG 190

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               ++            ++++F  VR      +S +     +  +Q       
Sbjct: 191 GPFLMNTWE-------FAKLVTFNQVRGAFGFNESTNIGRIMFPSVQCVASFAT 237


>gi|182436495|ref|YP_001824214.1| tryptophanyl-tRNA synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326777117|ref|ZP_08236382.1| tryptophanyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|178465011|dbj|BAG19531.1| putative tryptophanyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326657450|gb|EGE42296.1| tryptophanyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 352

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 33/246 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ++ H    ++    +I                 E+
Sbjct: 26  GIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHAIT----------IPQDPAEL 74

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N         +    G       +          +   ++  +  F   +RM  F+  
Sbjct: 75  RANTRLAVAQLLAA---GVDPERCTLFVQSHVPEHAQLGWVMNCLTGFGEASRMTQFKD- 130

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +S  +     +   F Y +LQ  D + L +     +   G DQ  +I    DL ER    
Sbjct: 131 KSAKQGADRATVGLFTYPVLQVADIL-LYQANQVPV---GEDQRQHIELTRDLAERFNGR 186

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN--IDD 266
             + F + +P +   +           KM K+ S    L   +  P    +  ++   D 
Sbjct: 187 YGQTFTVPAPYILKETAKIFDLQDPAVKMSKSASTPKGLINLLDDPKVTAKKVKSAVTDT 246

Query: 267 ADVVSF 272
             V+ F
Sbjct: 247 DTVIRF 252


>gi|407269|gb|AAA03403.1| unknown [Mycoplasma genitalium]
          Length = 81

 Score = 48.2 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/71 (53%), Positives = 54/71 (76%), Gaps = 2/71 (2%)

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQAYDF  L KN
Sbjct: 12  WLEKLNYIEVIRELGAFFSVNKMLSTDAFSARW--EKGLTLMELNYMILQAYDFYYLHKN 69

Query: 191 YDCRLQMGGSD 201
           ++  LQ+GGSD
Sbjct: 70  HNVTLQIGGSD 80


>gi|326491185|dbj|BAK05692.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326527699|dbj|BAK08124.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326533322|dbj|BAJ93633.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 399

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 78/244 (31%), Gaps = 31/244 (12%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGH----LTQLMLLFWLQKTGHKPISL 73
            +   P EL  L     V   Y G++ +   +H          +  +      G K    
Sbjct: 65  EECIQPDELKRLLQNKPVPICYDGFEPSGR-MHIAQGVVKTINVNKMIR---AGCKVKIW 120

Query: 74  MGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           +    + + +    D +  + +    I+                G        L +   +
Sbjct: 121 IADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAA-----------GMNLDGVEFLWSSEEI 169

Query: 133 --CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             C+ +Y  L+ +IG   ++ R+    ++  R   E+ L+  +  Y  +Q  D   L   
Sbjct: 170 NRCANEYWPLVMDIGRKNNIKRITRCCTIMGRSDNEE-LTAAQIFYPCMQCADIFFLK-- 226

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWL 247
               +   G DQ    +   +  + +K   K   L+  +L        KM K+   +   
Sbjct: 227 --ADICQLGMDQRKVNMLAREYCDDIKRKNKPIILSHHMLPGFKEGQEKMSKSDPTSAIF 284

Query: 248 NKEM 251
            ++ 
Sbjct: 285 MEDD 288


>gi|302553691|ref|ZP_07306033.1| tryptophanyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
 gi|302471309|gb|EFL34402.1| tryptophanyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
          Length = 337

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 78/256 (30%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ++ H    ++    + I  P    +
Sbjct: 1   MASDRPRVLSGIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHA-ITIPQDPKD 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A +            ++ L   G    
Sbjct: 59  LRANTRLAAAQLLAAGLDPDRCTLFVQSHVPEHAQLAW---------VMNCLTGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       ++  +  +  S   F Y ILQ  D + L +  +  +   G DQ  ++   
Sbjct: 110 MTQFKD----KAAKQGAERASVGLFTYPILQVADIL-LYQANEVPV---GEDQRQHVELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER        F +  P +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNGRFGPTFTVPKPYILKETAKIYDLQDPSIKMSKSASTPKGLINLLDEPKTTA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  ++   D   V+ F
Sbjct: 222 KKVKSAVTDTDTVIRF 237


>gi|255728597|ref|XP_002549224.1| tryptophanyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240133540|gb|EER33096.1| tryptophanyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 424

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
             +RG      +    LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 70  FLKRGVFFSQRDLDRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQE 124


>gi|153007893|ref|YP_001369108.1| hemolysin A [Ochrobactrum anthropi ATCC 49188]
 gi|151559781|gb|ABS13279.1| hemolysin A [Ochrobactrum anthropi ATCC 49188]
          Length = 253

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 24/51 (47%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +S +   + + L  L+V+ G   + + AR  ++   +K++   ++     +
Sbjct: 1   MSGETSDKNLRLDQLLVELGLFATRSRARDAIQRGTVKVDGKPVTKPGQTV 51


>gi|297201889|ref|ZP_06919286.1| tryptophanyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712738|gb|EDY56772.1| tryptophanyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 337

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ++ H    ++    +          
Sbjct: 1   MASDRPRVLSGIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHA---------- 49

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
              +   Q+ +E     +   +  +  G       +          +   ++  +  F  
Sbjct: 50  ---ITVPQDPKELTANTRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLAWVMNCLTGFGE 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S  +   S S   F Y ILQ  D + L +  +  +   G DQ  ++   
Sbjct: 107 ASRMTQFKD-KSARQGADSASVGLFTYPILQVADIL-LYQANEVPV---GEDQRQHVELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL  R      + F +  P +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLATRFNGRFGETFTIPKPYILKETAKIYDLQDPSIKMSKSASTPKGLINLLDEPKATA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  ++   D   V+ +
Sbjct: 222 KKVKSAVTDTDTVIRY 237


>gi|307191075|gb|EFN74815.1| Tryptophanyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 410

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 73/232 (31%), Gaps = 25/232 (10%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L++         Y G   +  ++H GHL   M   WLQ   + P+ +             
Sbjct: 85  LNLYEQGKPFYLYTGRGPSTHAMHLGHLIPFMFCKWLQDVFNVPLVV-----------QL 133

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + ++ +I++ I          I  G       + +N          +      +
Sbjct: 134 TDDEKAIWKNIKIEDAITLAYANARDIIACGFNPEKTFIFSNLE-----HIGNNPTFYQN 188

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAKNYDCRLQM-GGS 200
              + R ++F  V+       S    + ++   QA       F  + K+      +    
Sbjct: 189 MIRIQRCVTFNQVKGIFGFGDSDPIAKISFPPTQAAPAISSSFPFIFKDAKVHCLIPCAI 248

Query: 201 DQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DQ        D+  +L  PK     +   P L  +         + AI+L  
Sbjct: 249 DQDPYFRMTRDVAPKLGFPKPALLHSSFFPALQGSKTKMSASDNNTAIFLTD 300


>gi|242801730|ref|XP_002483827.1| tryptophanyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218717172|gb|EED16593.1| tryptophanyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 442

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ 
Sbjct: 81  RGLFFSHRDFDKILDKYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQD 132


>gi|47230042|emb|CAG10456.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 472

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 71/236 (30%), Gaps = 28/236 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD    Q     Y G   ++ ++H GHL   +   WLQ     P+ +             
Sbjct: 151 LDAYEKQKSFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFDVPLVI-----------QL 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   I+E            I  G       + ++  ++             +
Sbjct: 200 TDDEKYLWKDLTIEECHRFAVENAKDIIACGFDVNKTFIFSDLDYMG-----ASPEFYRN 254

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE--------LAKNYDCRLQMG 198
              + + ++F  V+       S    + ++  +QA               K+  C +   
Sbjct: 255 VVKIEKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFGSRKDIQCLIPC- 313

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
             DQ        D+  R+  PK     +   P L  A         + +I+L    
Sbjct: 314 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDANSSIFLTDTP 369


>gi|282860930|ref|ZP_06269996.1| tryptophanyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282564666|gb|EFB70202.1| tryptophanyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 337

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ++ H    ++    +I         
Sbjct: 1   MASDRPRVLSGIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHAIT-------- 51

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                   E++ N    +   +  +  G       +          +   ++  +  F  
Sbjct: 52  --VPQDPVELRSN---TRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLGWIMNCLTGFGE 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S  +     +   F Y +LQ  D + L +  +  +   G DQ  +I   
Sbjct: 107 ASRMTQFKD-KSAKQGADRATVGLFTYPVLQVADIL-LYQANEVPV---GEDQRQHIELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER      + F + SP +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNGRFGETFTVPSPYILKETAKIYDLQDPAVKMSKSASTPKGLINLLDEPKATA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  R+   D   V+ F
Sbjct: 222 KKVRSAVTDTDTVIRF 237


>gi|260887007|ref|ZP_05898270.1| tryptophan--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330839212|ref|YP_004413792.1| tryptophanyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260863069|gb|EEX77569.1| tryptophan--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746976|gb|AEC00333.1| tryptophanyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 363

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 86/314 (27%), Gaps = 33/314 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +  M   ++I+
Sbjct: 11  PTGR-LHLGHYVGSLKRRVELQNSGEYDEIYIMIADAQAL---------TDNMDNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNET--WLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G      +M        L  +    +     S    N  +  E 
Sbjct: 61  QNI---IEVALDYMACGLDPAKTVMFVQSEVPQLFEMTAYYMNLVTVSRLQRNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   +    ++  +   
Sbjct: 118 QMRNFETSIPVGF--FTYPISQAADITAFQ----ATTVPVGEDQEPMLEQTREIVRKFN- 170

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
            +++  T   L         +  +  +                  I D+      K ++ 
Sbjct: 171 -EVYGET---LVEPQSLLASQKAAMRLPGTDGKAKMSKSLGNGIYISDSAAEVKKKVMSM 226

Query: 279 LPMSEIDRMAKLQGKEIN----EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
               +  R+      E N           +E         E   A  A      +     
Sbjct: 227 YTDPDHIRVEDPGKIEGNTVFTYLDVFSRSEHFEKFLPEYENLDALKAHYSRGGLGDVKV 286

Query: 335 HMPTISISKDEVSR 348
               I++ +DE++ 
Sbjct: 287 KKFLIAVLEDELAP 300


>gi|89092748|ref|ZP_01165701.1| tryptophanyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083260|gb|EAR62479.1| tryptophanyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 425

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 72/227 (31%), Gaps = 26/227 (11%)

Query: 50  HAGHLTQLML-LFWLQKTG-HKPISLMGGGTSIIG--DPSFRDESRRMMRSQEIQENIEK 105
           H G+    +     + ++G +     +    ++I   DP      R    ++EI      
Sbjct: 17  HIGNYLGAIKPAIEMSQSGEYNNFYFLADYHALIKCHDP-----ERVAQSTREIAATWLA 71

Query: 106 IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
           +     +       +TD   +   TW+ +      L      +  +   + +S   +   
Sbjct: 72  LG--LDTDKATFYRQTDIPEITELTWILTCMCSKGLMNRAHAYKASVDANRDS--GKADL 127

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  ++   F+Y IL A D +      +  L   G DQ  +I    D+  R         T
Sbjct: 128 DDGVTMGLFSYPILMAADILMF----NADLIPVGKDQIQHIEMARDVAGRFNHTYENLFT 183

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            P         L+    G KM K+    I L       Y   +  + 
Sbjct: 184 LPEAVVDEATQLIPGLDGRKMSKSYDNTIPLFCSADELYKLIKQIKT 230


>gi|302392435|ref|YP_003828255.1| tryptophanyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302204512|gb|ADL13190.1| tryptophanyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 328

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 98/326 (30%), Gaps = 44/326 (13%)

Query: 37  TAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
             + G   T   LH GHL   L     LQ   +     +    ++              +
Sbjct: 6   RIFSGMRPTGK-LHLGHLIGVLNNWKDLQD-DYDCTFGVVDWHAL------------TTK 51

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             + ++  +  + +   +I  G     +++          +   LL  + S   + R+ +
Sbjct: 52  YDQTEDIKQNRREMVIDWISAGIDPDKSIIYVQSDIPEIAELHLLLSMLVSVSRLERLPT 111

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           ++     L+ + S+ F    Y IL A D + + K     +   G DQ  +I    ++  R
Sbjct: 112 YKDQVRELEVKDSVPFGLLEYPILMAADIL-IHKADTIPV---GEDQLPHIEITREIARR 167

Query: 216 LKTPKLFALTS----------PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
                L+  T           P L    G KM K+   AI+L  E     +         
Sbjct: 168 FNH--LYGETFPEPEPKLGEVPKLLGLDGRKMSKSYGNAIYLADEKEEIGDKVNQMVTDP 225

Query: 266 DA------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
           +              V  +     +  + EI    K       + K  +  E+ T     
Sbjct: 226 ERIRLDDPGHPEVCSVYDYHGIFNSEEVDEIKVNCKNADLGCRDCKVRLT-EVLTDYLAD 284

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTI 339
              ++A           I ++     
Sbjct: 285 IHKKRAELEENPEMIDEILAEGAQEA 310


>gi|251773464|gb|EES54012.1| Tryptophanyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 334

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/339 (13%), Positives = 104/339 (30%), Gaps = 43/339 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +  + L +  H     +    ++                ++  
Sbjct: 15  GIQPSGR-LHLGNYMGALRNWTLLQERHDCFFFIADWHAL------------STNYEKTD 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                ++ +   F+  G      ++          +   LL  +     + R  +++   
Sbjct: 62  ALRGNVRELLLDFLSAGLDPEKCVLFQQSHVKAHAELYLLLGMMTPVAWLLRNPTYKDQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--T 218
           ++++      +    Y +LQ  D V L +     +   G DQ  ++    ++  R     
Sbjct: 122 AQIENRDLAQYGFLGYPVLQTADIV-LYRPTHVPV---GQDQIPHLELAREIVRRFHSLY 177

Query: 219 PKLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
            ++F    PLLT         G KM K+   A++L+    + +                F
Sbjct: 178 GEVFPEPLPLLTETPKLPGLDGRKMSKSYDNAVFLSDTKEAVWEK--------------F 223

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
              +T           + +   +    +I   + T     RE    A         ++  
Sbjct: 224 RTMVTDTQRKRRSDPGRPEVCPVFSLHQIFTPKETVATIDRECRTAAIGCIDCKKILTGE 283

Query: 333 SQHMPTISISKDEVSRGMG---LLTLIVKAGFATSTNEA 368
            + +   +  +     G G   L  ++ ++G   +  EA
Sbjct: 284 VEAILEPARERRREIEGQGSERLSDIL-ESGARKARTEA 321


>gi|116198065|ref|XP_001224844.1| hypothetical protein CHGG_07188 [Chaetomium globosum CBS 148.51]
 gi|88178467|gb|EAQ85935.1| hypothetical protein CHGG_07188 [Chaetomium globosum CBS 148.51]
          Length = 458

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG +    +    LD          Y G   ++ S+H GH        WLQ T   P
Sbjct: 78  FLRRGIVFSHRDFELILDRYERGEPFFLYTGRGPSSDSVHVGHTIPFEFTKWLQDTFDVP 137

Query: 71  ISLM 74
           + +M
Sbjct: 138 LIIM 141


>gi|255712721|ref|XP_002552643.1| KLTH0C09768p [Lachancea thermotolerans]
 gi|238934022|emb|CAR22205.1| KLTH0C09768p [Lachancea thermotolerans]
          Length = 426

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 74/229 (32%), Gaps = 15/229 (6%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+         Y G   ++ S+H GH+   +   WLQ     P+ +    T        
Sbjct: 91  LDLYEQGKPFFLYTGRGPSSDSMHLGHMVPFVFTKWLQDVFDAPLVI--ELT-------- 140

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + + +   E++++     +S I           + ++       + + +  +  
Sbjct: 141 -DDEKFLFKQKLTIEDVKRFARQNASDIISVGFNPQKTFIFSDLAYMGGGFYETVVRVSR 199

Query: 147 FFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             + +   +           +   + ++       +Y  V    N    L     DQ   
Sbjct: 200 QITGSTAKAVFGFNDSDCIGKFHFASIQIASAFPSSYPDVLGIPNKTPCLIPCAIDQDPY 259

Query: 206 IICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                D+ E+LK  K   + +   P L  ++        + AI++    
Sbjct: 260 FRVCRDVAEKLKFSKPALIHSKFFPALQGSTTKMSASDDTTAIFMTDTP 308


>gi|238878368|gb|EEQ42006.1| tryptophanyl-tRNA synthetase [Candida albicans WO-1]
          Length = 424

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
             +RG      +    LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 70  FLKRGVFFSQRDLDRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQE 124


>gi|241950155|ref|XP_002417800.1| tryptophan-tRNA ligase, putative; tryptophanyl-tRNA synthetase,
           cytoplasmic, putative [Candida dubliniensis CD36]
 gi|223641138|emb|CAX45515.1| tryptophan-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 424

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
             +RG      +    LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 70  FLKRGVFFSQRDLDRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQE 124


>gi|218887424|ref|YP_002436745.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758378|gb|ACL09277.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 329

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/343 (11%), Positives = 94/343 (27%), Gaps = 34/343 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   LH GH   +  L    +  H  +    +    ++  D +     R  +    
Sbjct: 11  GMRPTGP-LHLGHYFGV--LKNWVEMQHEMEAFFFVADWHALTSDYADPSRIREFVPELV 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
               +             G      +M          +   +L  I     + R  +++ 
Sbjct: 68  TD-WVAA-----------GLDPEKCVMFQQSHIKEHAELHLILSMITPVSWLERNPTYKE 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +  +  +   ++    Y +L A D + +       +   G DQ  ++    ++  R   
Sbjct: 116 QKQEVVNKDLGNYGFLGYPVLMASDIL-IYHPKWVPV---GQDQLPHLELTREIARRFNF 171

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP-YNFWQYWRNIDDADVVSFAKRLT 277
             L+    P              +    L+    S  Y    Y R+  +          T
Sbjct: 172 --LYGDYFP-----EPEARLTPAAKCPGLDGRKMSKSYGNAIYLRDTMEEIAPKVRGMFT 224

Query: 278 TLPMSEIDRMAKLQGKEINEAKKII--ATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
                            +    +++    +   +  G   A        + F  ++ +  
Sbjct: 225 DTNRLRKSDPGNPDVCNLFPYHELMASPEQQAEIRQGCTSASLGCVDCKKIFLENLGAFL 284

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
            P        ++   G+  ++  AG   +  EA R +    ++
Sbjct: 285 GPLHERRAALLANPKGIQDIL-DAGDTRARAEASRIMA--GVR 324


>gi|163733415|ref|ZP_02140858.1| RNA pseudouridylate synthase family protein, putative [Roseobacter
           litoralis Och 149]
 gi|161393203|gb|EDQ17529.1| RNA pseudouridylate synthase family protein, putative [Roseobacter
           litoralis Och 149]
          Length = 285

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++ +   +G  +  ++ +AG   S  EA R +++  +K+N   IS+  L ++  D  
Sbjct: 1   MTSEPTPQGDRIAKVLSRAG-VASRREAERMIEAGRVKVNGQHISSPALNVQGTDKI 56


>gi|118431880|ref|NP_148625.2| tryptophanyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|152031702|sp|Q9Y924|SYW_AERPE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|290789897|pdb|3A04|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
           Hyperthermophilic Archaeon, Aeropyrum Pernix K1
 gi|290789898|pdb|3A05|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
           Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex
           With Tryptophan
 gi|116063203|dbj|BAA81476.2| tryptophanyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 372

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 30/211 (14%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +  + L+       V    G+  +    H GH   +  L +LQK G K 
Sbjct: 46  LMRRGIIFGHRDFDKILEAKARGERVAVLTGFMPSGK-FHFGHKLTVDQLIYLQKNGFKV 104

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    +           RR+ R + ++  +E      ++ I  G    D        
Sbjct: 105 FVAIADAEAF--------AVRRIGREEAVRIAVE---EYIANMIALGLDPKDTEFYFQTN 153

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-- 188
                 Y  L++      +   M +             L+  +    + QA D + +   
Sbjct: 154 --RGTPYFRLIQLFSGKVTAAEMEA---------IYGELTPAKMMASLTQAADILHVQLD 202

Query: 189 ---KNYDCRLQMGGSDQWGNIICGIDLGERL 216
                    + +G  DQ  ++    DL +R+
Sbjct: 203 EYGGYRHVVVPVGA-DQDPHLRLTRDLADRM 232


>gi|18313815|ref|NP_560482.1| tryptophanyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|20178127|sp|Q8ZTU5|SYW_PYRAE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|18161377|gb|AAL64664.1| tryptophanyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 375

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 68/247 (27%), Gaps = 25/247 (10%)

Query: 12  LSERGFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK-TGHK 69
           L  RGF +   +   +            Y G   +   +H GH+   +LL W     G +
Sbjct: 48  LIRRGFFYAHRDFDFIMKWHGEGRPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFGLE 106

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +        DP  + E      +   +  ++ I   FS    +    T  +     
Sbjct: 107 VYFQITDDEKFYDDPEMKLEE---ATNWAYENALDVIALGFSPERLHLIIDTKDI----- 158

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF---VE 186
                     +   +    + N      +V++      S +     Y  LQ        E
Sbjct: 159 -----KPLYPIAVRVAKKLTWN------TVKATFGFTDSTNIGLIFYPSLQIAVAFLPTE 207

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +     L     DQ        D+ + L  PK   L S  +   +G       +    
Sbjct: 208 LRREATPVLIPCAIDQDPYFRLARDIADALGYPKPSTLYSKFIMALTGESKMSASNPDSA 267

Query: 247 LNKEMTS 253
           +      
Sbjct: 268 IYTLDDE 274


>gi|68479103|ref|XP_716357.1| hypothetical protein CaO19.12691 [Candida albicans SC5314]
 gi|68479232|ref|XP_716295.1| hypothetical protein CaO19.5226 [Candida albicans SC5314]
 gi|46437961|gb|EAK97299.1| hypothetical protein CaO19.5226 [Candida albicans SC5314]
 gi|46438024|gb|EAK97361.1| hypothetical protein CaO19.12691 [Candida albicans SC5314]
          Length = 424

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
             +RG      +    LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 70  FLKRGVFFSQRDLDRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQE 124


>gi|169763042|ref|XP_001727421.1| tryptophanyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae
           RIB40]
 gi|238488889|ref|XP_002375682.1| tryptophanyl-tRNA synthetase, putative [Aspergillus flavus
           NRRL3357]
 gi|83770449|dbj|BAE60582.1| unnamed protein product [Aspergillus oryzae]
 gi|220698070|gb|EED54410.1| tryptophanyl-tRNA synthetase, putative [Aspergillus flavus
           NRRL3357]
          Length = 419

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 18/178 (10%)

Query: 15  RGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L         Y G   +  SLH GH   L    WLQ     P+  
Sbjct: 64  RGLFFSHRDFDRILNLYERGEPFFLYTGRGPSTGSLHLGHTIPLQFTKWLQDVFDVPLVF 123

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 ++ D    DE      +   +E +E  K      I  G  K    + ++  +L 
Sbjct: 124 ------MLTD----DEKALFKDNLTFEETMEYAKENARDIIAIGFDKKKTFIYSDLKYLS 173

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +   ++           +++++F  VR      +S +     +  +Q       +   
Sbjct: 174 NHFLMNAWE-------FSKLVTFNQVRGAFGFNESTNIGRIFFPSVQCVAAFATSYPE 224


>gi|170783172|ref|YP_001711506.1| tryptophanyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157742|emb|CAQ02944.1| tryptophanyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 337

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 72/229 (31%), Gaps = 37/229 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII--GDPSF-RDESRRMMRS 96
           G   +A SL  G+    L+    LQ T H  +  +    +I    DP   RD +RR    
Sbjct: 10  GMQPSADSLQIGNYIGALLQWKELQTT-HDAVFCVVDLHAITVPQDPGALRDSTRRTAAQ 68

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                            +     ++         W+ +      L   G    + +    
Sbjct: 69  YIAAG--------IDPAVSTLFVQSHVSAHTELAWILN-----TLTGFGEASRMTQFKD- 114

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              +S+ +   + +   F Y  L A D +     Y   +   G DQ  ++    DL +R 
Sbjct: 115 ---KSQKQGADATTLGLFAYPTLMAADIL----LYGTEVVPVGDDQKQHVELTRDLAKRF 167

Query: 217 K--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSP 254
                 +F +  P++   +           KM K+ +    +   +  P
Sbjct: 168 NSRFGDVFRIPEPMIQKDTARIYDLQDPTSKMSKSAASDAGVVWLLDEP 216


>gi|226489134|emb|CAX74916.1| tryptophanyl-tRNA synthetase [Schistosoma japonicum]
          Length = 402

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 33/254 (12%)

Query: 9   LSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  E+   +  +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 56  LHHLLKRQIFFSHRDLEEIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQDVF 115

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + ++  I E     +      I  G       + +
Sbjct: 116 DVPLVI-----------QLTDDEKFLWKNLSISEVRHLTRENAKDIIAMGFDPKKTFIFS 164

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  ++             +   + R++++   R+      S    + ++  +QA      
Sbjct: 165 NFEYMG-----TCPDFYRTVCQIQRLVTYNQARAIFGFNDSDCIGKISFPAIQAAPSFAQ 219

Query: 188 A-----------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
           +           ++  C +     DQ        D+  RL  PK   ++++  P L   +
Sbjct: 220 SFPTVFQNLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLPKPSLIYSVFFPALQG-N 277

Query: 234 GTKMGKTLSGAIWL 247
            TKM  +       
Sbjct: 278 QTKMSASNPNTSVF 291


>gi|226489132|emb|CAX74915.1| tryptophanyl-tRNA synthetase [Schistosoma japonicum]
          Length = 413

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 33/254 (12%)

Query: 9   LSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  E+   +  +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 67  LHHLLKRQIFFSHRDLEEIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQDVF 126

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + ++  I E     +      I  G       + +
Sbjct: 127 DVPLVI-----------QLTDDEKFLWKNLSISEVRHLTRENAKDIIAMGFDPKKTFIFS 175

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  ++             +   + R++++   R+      S    + ++  +QA      
Sbjct: 176 NFEYMG-----TCPDFYRTVCQIQRLVTYNQARAIFGFNDSDCIGKISFPAIQAAPSFAQ 230

Query: 188 A-----------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
           +           ++  C +     DQ        D+  RL  PK   ++++  P L   +
Sbjct: 231 SFPTVFQNLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLPKPSLIYSVFFPALQG-N 288

Query: 234 GTKMGKTLSGAIWL 247
            TKM  +       
Sbjct: 289 QTKMSASNPNTSVF 302


>gi|226470040|emb|CAX70301.1| tryptophanyl-tRNA synthetase [Schistosoma japonicum]
          Length = 326

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 33/254 (12%)

Query: 9   LSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  E+   +  +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 67  LHHLLKRQIFFSHRDLEEIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQDVF 126

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + ++  I E     +      I  G       + +
Sbjct: 127 DVPLVI-----------QLTDDEKFLWKNLSISEVRHLTRENAKDIIAMGFDPKKTFIFS 175

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  ++             +   + R++++   R+      S    + ++  +QA      
Sbjct: 176 NFEYMG-----TCPDFYRTVCQIQRLVTYNQARAIFGFNDSDCIGKISFPAIQAAPSFAQ 230

Query: 188 A-----------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
           +           ++  C +     DQ        D+  RL  PK   ++++  P L   +
Sbjct: 231 SFPTVFQNLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLPKPSLIYSVFFPALQG-N 288

Query: 234 GTKMGKTLSGAIWL 247
            TKM  +       
Sbjct: 289 QTKMSASNPNTSVF 302


>gi|56756935|gb|AAW26639.1| SJCHGC05295 protein [Schistosoma japonicum]
          Length = 413

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 33/254 (12%)

Query: 9   LSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  E+   +  +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 67  LHHLLKRQIFFSHRDLEEIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQDVF 126

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + ++  I E     +      I  G       + +
Sbjct: 127 DVPLVI-----------QLTDDEKFLWKNLSISEVRHLTRENAKDIIAMGFDPKKTFIFS 175

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  ++             +   + R++++   R+      S    + ++  +QA      
Sbjct: 176 NFEYMG-----TCPDFYRTVCQIQRLVTYNQARAIFGFNDSDCIGKISFPAIQAAPSFAQ 230

Query: 188 A-----------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
           +           ++  C +     DQ        D+  RL  PK   ++++  P L   +
Sbjct: 231 SFPTVFQNLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLPKPSLIYSVFFPALQG-N 288

Query: 234 GTKMGKTLSGAIWL 247
            TKM  +       
Sbjct: 289 QTKMSASNPNTSVF 302


>gi|116669683|ref|YP_830616.1| tryptophanyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116609792|gb|ABK02516.1| tryptophanyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 347

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 66/206 (32%), Gaps = 22/206 (10%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                 G   TA SLH G+    +     +Q   +  +  +    +I  D          
Sbjct: 10  KKRILSGAKPTADSLHLGNYIGAVRNWVDMQ-AEYDAVFFIPDLHAITVD---------- 58

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
               E  E  ++ + + + +I  G     ++           +    L  I  F   +RM
Sbjct: 59  ---FEPAELAKRTRVVAAQYIAAGIDPDKSIFFVQSHVPEHAQLAWALNCITGFGEASRM 115

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+  +++     S +   F Y  L A D +     Y   L   G DQ  ++    +L 
Sbjct: 116 TQFKD-KTQKSGADSATLGLFAYPTLMAADIL----LYQTDLVPVGEDQRQHLELTRNLA 170

Query: 214 ERLKTPKLFALTSP--LLTTASGTKM 237
           +R  T      T P   +  A+    
Sbjct: 171 QRFNTRFGHTFTVPEATILKATAKIY 196


>gi|330465686|ref|YP_004403429.1| tryptophanyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328808657|gb|AEB42829.1| tryptophanyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 341

 Score = 47.8 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 35/243 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               + G   TA S H G+      +     LQ++ H  +  +    +            
Sbjct: 7   RPRVFSGIQPTADSFHLGNYLG--AVRHWVALQES-HDAVYCVVDLHA------------ 51

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            +    + +   ++ +   +  +  G       +          +   +L  +  F   +
Sbjct: 52  -ITAGHDPKVLHQRSRVAAAQLLAVGLDPERCTLFVQSQVPEHAQLAWVLGCLTGFGEAS 110

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S+ +  +  S   F Y ILQA D + L +     +   G DQ  ++    D
Sbjct: 111 RMTQFKD-KSQKQGNERASVGLFTYPILQAADIL-LYQANAVPV---GEDQRQHLELSRD 165

Query: 212 LGERL--KTPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L +R        F +  P +  A+           KM K+ S    +   +  P    + 
Sbjct: 166 LAQRFNTHFGPTFTVPVPHIVKATAKITDLQDPTAKMSKSSSSPAGIVDLLEDPARSAKK 225

Query: 261 WRN 263
            R+
Sbjct: 226 IRS 228


>gi|77918202|ref|YP_356017.1| tryptophanyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77544285|gb|ABA87847.1| tryptophanyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 321

 Score = 47.8 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 67/218 (30%), Gaps = 32/218 (14%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +  SLH G+   +M  +   Q+  H+    +    ++      +      +    +
Sbjct: 6   GIQPSG-SLHLGNYFGMMKKMVDYQEH-HELFCFIANYHAMTSVTDGK-----ALAKGTL 58

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +     +             ++D   +   TW            + +F  +  +    S 
Sbjct: 59  EAAANFLALGLDPEKSVFWVQSDVPEVQELTW-----------ALSNFTPMGLLERCHSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + ++ +  + +   F Y +L A D +     +   L   G DQ  ++    D+  +    
Sbjct: 108 KDKVAKGIAPNHGLFAYPVLMAADIL----LFGGELVPVGKDQKQHLEVARDIAIKFNNQ 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWLN 248
               +  P          +    G KM K+    I L 
Sbjct: 164 YGDVMVIPEPDIDDELATIPGLDGQKMSKSYKNTIDLF 201


>gi|254442871|ref|ZP_05056347.1| tryptophanyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257179|gb|EDY81487.1| tryptophanyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 321

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 83/270 (30%), Gaps = 25/270 (9%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LHAG+   +M     LQ+ G +    +    S+                 + 
Sbjct: 6   GIQPSGI-LHAGNYFGMMKPSIELQEQG-EAFYFIADYHSM-------------TSLTDA 50

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +   E  K +   F+  G     A++          ++++L   + +   +  +    S 
Sbjct: 51  KLRREYTKRVAIDFLACGLDPKKAVLFKQSD---VPEHVELSWILSTICPMGWLERCHSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           + ++ +  + +   F Y +L A D +     YD  +   G DQ  ++    DL  +    
Sbjct: 108 KDKIAKGLATNHGLFAYPVLMAADIL----IYDADVVPVGQDQKQHVEVTRDLASKFNEL 163

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             + F +  P +        G                +   +  +      V+       
Sbjct: 164 YGETFVVPEPRIRREVAKVPGTDGGKMSKSYNNTIDIFGQEKAIKKRIMGMVMDSRTMEE 223

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
             P +E +   ++     +E   +   E  
Sbjct: 224 PKPDAEENIAIQILKHVADEETYLETVEAL 253


>gi|149914092|ref|ZP_01902624.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           AzwK-3b]
 gi|149812376|gb|EDM72207.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           AzwK-3b]
          Length = 263

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +G  +  +I +AG A S  EA R +++  + +N   I    L +  +D  
Sbjct: 7   KGDRIAKVIARAGLA-SRREAERMIEAGRVTVNGKKIDRAALNVTDKDRI 55


>gi|50290293|ref|XP_447578.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526888|emb|CAG60515.1| unnamed protein product [Candida glabrata]
          Length = 425

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 80/236 (33%), Gaps = 29/236 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+         Y G   ++ S+H GHL   M   WLQ      + +    T        
Sbjct: 90  LDLYEQGKPFFLYTGRGPSSGSMHMGHLVPFMFTKWLQDVFDCALVI--ELT-------- 139

Query: 87  RDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
            D+ + + + +   ++++   +      I  G    +  + ++  ++    Y +++    
Sbjct: 140 -DDEKFLFKPKLTIDDVKGFARENARDIIAVGFNPENTFIFSDLEYMGGAFYENVV---- 194

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-------KNYDCRLQMG 198
               V+R ++  + ++      S    +F++  +Q       +             L   
Sbjct: 195 ---RVSRQITGSTAKAVFGFTDSDCIGKFHFASIQIATAFPSSFPDVLGLPPKTPCLIPC 251

Query: 199 GSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
             DQ        D+ ++LK  K   + +   P L  ++        + AI++    
Sbjct: 252 AIDQDPYFRVCRDVADKLKYSKPALIHSRFFPALQGSTTKMSASDDTSAIFMTDTP 307


>gi|27382606|ref|NP_774135.1| hypothetical protein bll7495 [Bradyrhizobium japonicum USDA 110]
 gi|27355778|dbj|BAC52760.1| bll7495 [Bradyrhizobium japonicum USDA 110]
          Length = 696

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 33/117 (28%), Gaps = 2/117 (1%)

Query: 280 PMSEIDRMAKLQGKEINEAKK-IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           P    +  +       +E +                E   A        +     +  P 
Sbjct: 306 PRERSEGRSDWHEHPRSEGRFGDRPRRENEDESRIFEKRPAFGGRGAYRERDRDFEGRPR 365

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              +      G  +   + +AG A S  +A   +    + +N  +I++  L I   D
Sbjct: 366 REDAPKPKKAGERIAKALARAGLA-SRRDAEEMVTQGRVAVNGRVINSPALDITPND 421


>gi|296128865|ref|YP_003636115.1| tryptophanyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020680|gb|ADG73916.1| tryptophanyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 351

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 82/244 (33%), Gaps = 40/244 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSI-IG-DPS-FRDESR 91
             + G   T+ SL  G+    +   W  LQ T H  I  +    ++ +G DP   R+ +R
Sbjct: 19  RIFSGMQPTSDSLQLGNYLGALT-QWVALQDT-HDAIYCVVDLHALTVGPDPKVLRERTR 76

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R          ++  + I             A       W        +L  +  F    
Sbjct: 77  RTAAQYLAAG-VDPARSILFVQSHVPEHAELA-------W--------ILSCLTGFGEAG 120

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +     +   F Y +L A D +     YD  L   G DQ  ++    D
Sbjct: 121 RMTQFKD-KSAKQGSDGTTVGLFTYPVLMAADIL----LYDTALVPVGEDQRQHLELSRD 175

Query: 212 LGER---LKTPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
           L +R      P    +  P + +A+           KM K+      L + +  P    +
Sbjct: 176 LAQRLNSRFGPGTVVVPEPYIVSATAKIYDLQDPTSKMSKSAESPNGLIELLDDPKVVAK 235

Query: 260 YWRN 263
             R+
Sbjct: 236 RIRS 239


>gi|322795683|gb|EFZ18362.1| hypothetical protein SINV_05189 [Solenopsis invicta]
          Length = 415

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 69/222 (31%), Gaps = 27/222 (12%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
            Y G   +  ++H GHL   M   WLQ     P+ +              D+ + + ++ 
Sbjct: 101 LYTGRGPSTDAMHLGHLIPFMFCKWLQDVFDVPLVI-----------QLTDDEKAIWKNI 149

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +I++ I+         I  G       + +N          +      +   + R ++F 
Sbjct: 150 KIEDAIKLAYANARDIIACGFKPEKTFIFSNLE-----HIGNNSAFYQNMIRIQRCVTFN 204

Query: 158 SVRSRLKREQSLSFLEFNYMILQA-------YDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            V+       S    +  +   QA       + F+       C +     DQ        
Sbjct: 205 QVKGIFGFGDSDPIAKIAFPPTQAAPAISGSFPFIFKNAKVHCLIPC-AIDQDPYFRMTR 263

Query: 211 DLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D+  +L  PK     A   P L  +         S AI+L  
Sbjct: 264 DVAPKLGFPKPALLHATFFPALQGSKTKMSASDNSTAIFLTD 305


>gi|229473319|gb|ACQ73211.1| tryptophanyl-tRNA synthetase 1 [Streptomyces griseus subsp.
           griseus]
          Length = 352

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 33/246 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ++ H    ++    +I                 E+
Sbjct: 26  GIQPTAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDLHAIT----------VPQDPAEL 74

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N         +    G       +          +   ++  +  F   +RM  F+  
Sbjct: 75  RANTRLAVAQLLAA---GLDPDRCTLFVQSHVPEHAQLGWVMNCLTGFGEASRMTQFKD- 130

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +S  +     +   F Y +LQ  D + L +     +   G DQ  +I    DL ER    
Sbjct: 131 KSAKQGADRATVGLFTYPVLQVADIL-LYQANQVPV---GEDQRQHIELTRDLAERFNGR 186

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN--IDD 266
             + F + +P +   +           KM K+ S    L   +  P    +  ++   D 
Sbjct: 187 YGQTFTVPAPYILKETAKIFDLQDPAVKMSKSASTPKGLINLLDDPKATAKKVKSAVTDT 246

Query: 267 ADVVSF 272
             V+ F
Sbjct: 247 DTVIRF 252


>gi|19074853|ref|NP_586359.1| TRYPTOPHANYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|51704221|sp|O96771|SYW_ENCCU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|19069578|emb|CAD25963.1| TRYPTOPHANYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 385

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 15  RGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           RG +    +   L D + +      Y G   ++ ++H GH    +L  ++Q  
Sbjct: 59  RGIVFAHRDFNLLLDEIANNRPFYLYTGRGPSSKTMHIGHTIPFLLCKYMQDA 111


>gi|291224910|ref|XP_002732445.1| PREDICTED: Tryptophanyl-tRNA synthetase-like [Saccoglossus
           kowalevskii]
          Length = 414

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 75/235 (31%), Gaps = 28/235 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+   ++     Y G   ++ ++H GHL   +   +LQ     P+ +             
Sbjct: 91  LNDFENKKPFFLYTGRGPSSEAMHLGHLIPFIFTKYLQDAFDVPLVI-----------QL 139

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   +++  E         I  G       + ++  ++             +
Sbjct: 140 TDDEKFLWKDLTVEKANEFAYENAKDIIALGFDVNKTFIFSDIDYIG-----SSTAFYQN 194

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY--------DFVELAKNYDCRLQMG 198
              + + ++F  V+       S S  + ++  +QA         D      +  C +   
Sbjct: 195 MIKIQKCVTFNQVKGIFGFNDSDSIGKISFPAIQAAPSFSNSFPDIFGSRSDIHCLIPC- 253

Query: 199 GSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKE 250
             DQ        D+  RL  PK     +   P L  A         + +I+L  E
Sbjct: 254 AIDQDPYFRMTRDVAPRLGYPKPALLHSQFFPALQGAQTKMSASDPNSSIFLTDE 308


>gi|295658597|ref|XP_002789859.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226283003|gb|EEH38569.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 453

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 45/116 (38%), Gaps = 2/116 (1%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  ++  +      AE A   +         +   P + 
Sbjct: 100 HGEQVRESQWEKMFCRRLRSVVPMDVNYLARNDGSAESAGRGSGVQEAGPRKAPLTPYMQ 159

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           ++   + R + +   I +A FA+ST +AR+ +   ++ +N   + +    +   D 
Sbjct: 160 MAFAPLERRLDV--AIFRAMFASSTRQARQFVLHGSVTVNGKKMKHPGYLLNPGDL 213


>gi|300780071|ref|ZP_07089927.1| S4 domain protein [Corynebacterium genitalium ATCC 33030]
 gi|300534181|gb|EFK55240.1| S4 domain protein [Corynebacterium genitalium ATCC 33030]
          Length = 90

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + L   +  A    S  EA+  + +  + +N  ++++    +   D
Sbjct: 4   PIKLGQFLKLANLVESGGEAKELIATGEVAVNGEVVTSRGFSLDDGD 50


>gi|327310786|ref|YP_004337683.1| tryptophanyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947265|gb|AEA12371.1| tryptophanyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 374

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK-TGHK 69
           L  RGF +   +  E L    S      Y G   +   +H GH+   +LL W     G +
Sbjct: 48  LIRRGFFYAHRDFDEILRWHGSGRPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFGLE 106

Query: 70  PIS 72
              
Sbjct: 107 VYF 109


>gi|149044164|gb|EDL97546.1| rCG27710, isoform CRA_a [Rattus norvegicus]
 gi|149044166|gb|EDL97548.1| rCG27710, isoform CRA_a [Rattus norvegicus]
 gi|149044167|gb|EDL97549.1| rCG27710, isoform CRA_a [Rattus norvegicus]
 gi|149044168|gb|EDL97550.1| rCG27710, isoform CRA_a [Rattus norvegicus]
          Length = 259

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           LD   ++     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQD 189


>gi|149044165|gb|EDL97547.1| rCG27710, isoform CRA_b [Rattus norvegicus]
          Length = 271

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           LD   ++     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 151 LDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQD 189


>gi|114798538|ref|YP_759667.1| pseudouridine synthase rsuA family protein [Hyphomonas neptunium
           ATCC 15444]
 gi|114738712|gb|ABI76837.1| pseudouridine synthase rsuA family protein [Hyphomonas neptunium
           ATCC 15444]
          Length = 305

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            + S G  +   + +AG   S  E  R +++  + +N   +++   ++  ++    G   
Sbjct: 32  ADWSEGERIAKYLARAG-VASRREVERLIEAGEVTVNGQKLTSPAFKVTGREAIKVGRKV 90

Query: 404 LSF 406
           +  
Sbjct: 91  IQA 93


>gi|88859200|ref|ZP_01133840.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818217|gb|EAR28032.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 332

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 59/220 (26%), Gaps = 29/220 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ   +    L+     +         +      +++  N
Sbjct: 11  PTGP-LHLGHYVGSLKNRIELQNH-YSQTILIADLQGL---------TDNSHNPEKVSSN 59

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           I  +       +     KT   + +    L  +          S    N  +  E     
Sbjct: 60  ILNVLA-DYLAVGICPTKTTICLQSALPALSELTMFYANLVSVSRLERNPTVKAEIASKE 118

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
                 + F  F+Y I QA D        D  L   G DQ   I    ++  +L      
Sbjct: 119 FGSSIPVGF--FSYPISQAADITAF----DATLVPVGDDQLPMIEITNEIVRKLNNIAQK 172

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                   L + T  L       KM K+L   I       
Sbjct: 173 TILTQAKPLLSDTPRLPGVDGKAKMSKSLGNVITFGSSDD 212


>gi|254509889|ref|ZP_05121956.1| ribosomal large subunit pseudouridine synthase [Rhodobacteraceae
           bacterium KLH11]
 gi|221533600|gb|EEE36588.1| ribosomal large subunit pseudouridine synthase [Rhodobacteraceae
           bacterium KLH11]
          Length = 298

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG A S  EA R +++  + +N   I++  L +  +D  
Sbjct: 33  PPGDRIAKVLARAGIA-SRREAERMIEAGRVAVNGKPINSPALNVTGKDKI 82


>gi|163740839|ref|ZP_02148232.1| RNA pseudouridylate synthase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161385830|gb|EDQ10206.1| RNA pseudouridylate synthase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 447

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           A      S  +   PT + +  +   G  +  ++ +AG   S  EA R +    + +N  
Sbjct: 25  ARNTRPASAKAGKAPTDTPATGDGPEGDRIAKVLSRAG-VASRREAERMIAEGRVAVNGK 83

Query: 383 IISNEKLQI 391
           +I +  L +
Sbjct: 84  VIDSPALNV 92


>gi|126275920|ref|XP_001386922.1| Cytoplasmic tryptophanyl-tRNA synthetase [Scheffersomyces stipitis
           CBS 6054]
 gi|126212791|gb|EAZ62899.1| Cytoplasmic tryptophanyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 424

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 7/58 (12%)

Query: 12  LSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
             +RG      + R+L  + +          Y G   ++ S+H GH+   +   WLQ 
Sbjct: 70  FLKRGVFF---SERDLTKILNLYEAGEPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQD 124


>gi|313232490|emb|CBY24158.1| unnamed protein product [Oikopleura dioica]
          Length = 489

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            + LD+   +     Y G   ++ ++H GHL   ++  WLQ T   P+ +
Sbjct: 129 EQILDLYEQKKPFYLYTGRGPSSQAMHLGHLVPFIMTKWLQDTFDVPLVI 178


>gi|15229319|ref|NP_187110.1| tRNA synthetase class I (W and Y) family protein [Arabidopsis
           thaliana]
 gi|145331754|ref|NP_001078104.1| tRNA synthetase class I (W and Y) family protein [Arabidopsis
           thaliana]
 gi|6175164|gb|AAF04890.1|AC011437_5 putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|19310593|gb|AAL85027.1| putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|21436361|gb|AAM51350.1| putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|110740619|dbj|BAE98413.1| putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332640582|gb|AEE74103.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332640584|gb|AEE74105.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 402

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 16/229 (6%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
             LD          Y G   ++ +LH GHL   M   +LQ+   K   ++          
Sbjct: 78  EILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEA-FKVPLVI---------- 126

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
              D+ + + ++  ++E+    +      I  G   T   + ++  ++    Y ++++ +
Sbjct: 127 QLTDDEKSIWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVK-V 185

Query: 145 GSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           G   ++N+ +            + S   ++       ++  +   K+    L     DQ 
Sbjct: 186 GKCVTLNKAMGIFGFSGEDPIAKLSFPPVQAVPSFPSSFPHLFPGKDNLRCLIPCAIDQD 245

Query: 204 GNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                  D+  RL   K   + +   P L   +G       + AI++  
Sbjct: 246 PYFRMTRDVAPRLGYSKPALIESTFFPALQGENGKMSASDPNSAIYVTD 294


>gi|95930329|ref|ZP_01313066.1| tryptophanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133581|gb|EAT15243.1| tryptophanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 321

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 68/219 (31%), Gaps = 32/219 (14%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +  SLH G+   +M  +   Q+ G +    +    ++      +      +    +
Sbjct: 6   GIQPSG-SLHLGNYFGMMKKMIDYQEQG-ELFCFIANYHAMTSVSDGK-----ALAKGTL 58

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +     +             ++D   +    W            + +F  +  +    S 
Sbjct: 59  EAAANFLALGMDPERSTFWVQSDVPEVQELAWF-----------LSNFTPMGLLERCHSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + ++ +  + +   F Y +L + D +     ++      G DQ  ++    D+  ++   
Sbjct: 108 KDKIAKGIAANHGLFAYPVLMSADIL----IFNSDKVPVGKDQKQHVEVTRDIAAKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWLNK 249
                T P          +    G KM K+    I L +
Sbjct: 164 YGEIFTLPEPDIDDDVATVPGLDGQKMSKSYGNTIDLFQ 202


>gi|309811198|ref|ZP_07704990.1| tryptophan--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434810|gb|EFP58650.1| tryptophan--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 347

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 24/202 (11%)

Query: 41  GYDLTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T+ SLH G+    Q+  +  +Q+ G  P   +    ++               S +
Sbjct: 20  GMQPTSDSLHLGNYLGAQINWVR-MQE-GFTPYFCVVDLHAL-------------TVSPD 64

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                E+     + ++  G     + +          +   +L  I  F    RM  F+ 
Sbjct: 65  PALLRERSYATAAQYLAGGVDPARSAVFVQSHVREHAELAWVLNCITGFGEAGRMTQFKD 124

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
            ++  +   + S   F Y IL A D +     YD +    G DQ  ++    +L +R   
Sbjct: 125 -KAGKRGNDNTSVGLFTYPILMAADIL----LYDAQYVPVGEDQRQHLELTRNLAQRFNS 179

Query: 218 -TPKLFALTSPLLTTASGTKMG 238
              + F +  P +   +   M 
Sbjct: 180 RFGETFVVPEPYIPEGTARVMS 201


>gi|242773632|ref|XP_002478279.1| tyrosyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218721898|gb|EED21316.1| tyrosyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 391

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 79/257 (30%), Gaps = 19/257 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L        ++      IL        Y G   T    H G+ T  + +  L   G + 
Sbjct: 10  DLIRENLEEILNPEIVESILAEGRNPRIYWGTATTGRP-HTGYFTPAIKIAQLLAAGCEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNE 129
           + L+    + +               + ++  ++  + +  + ++  G        +   
Sbjct: 69  VILLADVHAFL--------DSMKAPLELVENRVKYYEKVIRAILESVGVSTEKLEFVLGS 120

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           ++  +  Y+  +  + +  S +      +   +      LS     Y ILQ  D   L  
Sbjct: 121 SYQRNSDYVMDVYRLAALTSEHDAKKAGAEIVKQSANAPLS--GLLYPILQVLDEEYLK- 177

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                 ++GG       I   +   +L   K   L +P++   +G KM  +         
Sbjct: 178 ---VDAELGGMSHLP-CIAATEWLPKLGYRKRAHLVTPMVAGLNGGKMSSS--DPDSKID 231

Query: 250 EMTSPYNFWQYWRNIDD 266
            +  P +  +  R  + 
Sbjct: 232 LLDPPESVAKKVRKSEA 248


>gi|281210105|gb|EFA84273.1| tryptophanyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 597

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 33/276 (11%)

Query: 21  ISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL------------QKT 66
           I++  +           V  + G   T+  LH G+    M L W+            Q+ 
Sbjct: 237 ITSIEQFKTNYDFKNNKVRIFSGMQPTSGGLHLGNYVGAM-LNWVEIQNTILSGDNNQQQ 295

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
            H  +  +    S+         + + +  + ++ N      +   +I  G   T  ++ 
Sbjct: 296 QHDILFSIVDLHSL---------TNKAVTPERLRAN---TLDVAIEYISCGIDPTKVILF 343

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           N        +   +L    +   +  M+   E  +         ++    Y IL A D +
Sbjct: 344 NQSQVSAHAELQWILSCHTAIGRLENMVQYKEKSKKNTSSLVQNTYGLLAYPILMAADIL 403

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L K     +   G DQ  ++     +        K+   T P +   + TK   +L+ A
Sbjct: 404 -LYKASHVPV---GEDQTQHVELTRKIAYAFNSHHKVDFFTLPQIVNCTETKRIMSLTDA 459

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
                +     N      + D        K  T   
Sbjct: 460 STKMSKSDPSENSRINLTDSDKIITNKIMKAATDST 495


>gi|255690553|ref|ZP_05414228.1| tryptophan--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624012|gb|EEX46883.1| tryptophan--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 364

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 81/287 (28%), Gaps = 43/287 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLKRRVELQDAGDYSKMFIFIADSQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G   + A +        LC + +  +     S    N  +  E 
Sbjct: 63  QNV---IEVALDYLACGIDPSKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKAEI 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   +    ++  R   
Sbjct: 120 QMRNFEASIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMLEQAREIVRRFNY 173

Query: 219 PKLFALTSPLLT------------TASGTKMGKTLSGAIWLNKEM-------TSPYNFWQ 259
                L  P +             T    KM K+L   I+L++E         S Y    
Sbjct: 174 IYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEEPEEIQKKIMSMYTDPG 233

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           + R  D   +               +   +      N A+     + 
Sbjct: 234 HLRVQDPGKIEGNTVFTYLDAFCRPEHFERYLPDYPNLAELKAHYQH 280


>gi|84996625|ref|XP_953034.1| tyrosyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65304030|emb|CAI76409.1| tyrosyl-tRNA synthetase, putative [Theileria annulata]
          Length = 402

 Score = 47.4 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/275 (11%), Positives = 76/275 (27%), Gaps = 29/275 (10%)

Query: 17  FIHQISNPRELDILCSQGVVT--AYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPIS 72
              +   P EL  L  +   T  AY G++ +   +H   G L ++  +  + K G K + 
Sbjct: 71  LSEECIKPDELLSLLQKKDYTPLAYDGFEPSGR-MHIAQG-LCKVDTVNIMSKIGIKSVI 128

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            +    +++ +    D  +  +  +      +            G        L     +
Sbjct: 129 WIADWHAMLNNKFGGDLKKIRIVGEYFIHIWKAA----------GMNPDSVKFLWASDEV 178

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRS-RLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                +     +    S N        ++            +  Y  +Q  D   +    
Sbjct: 179 DKNPDLYWRLSMDISRSFNITRMKRCSQALGRTEGDDQPSAQLLYPAIQCADIFFI---- 234

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFA--LTSPLLTTASGTKMGKTLSGAIWL 247
              +   G DQ    +   +     ++    +       P L            + AI++
Sbjct: 235 GADICQLGMDQRKINVLAREYSELRKIPRSPVVLSHRMLPGLVEGQEKMSKSNPNSAIFM 294

Query: 248 NKEMTSPYNFWQYWRN----IDDADVVSFAKRLTT 278
           +       +  +        +D   V+++   +  
Sbjct: 295 DDSAEEVSSKIKKAFCPPGVVDGNPVIAYFCFIVF 329


>gi|3849866|emb|CAA10034.1| tryptophanyl tRNA synthetase [Encephalitozoon cuniculi]
          Length = 134

 Score = 47.4 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 15  RGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           RG +    +   L D + +      Y G   ++ ++H GH    +L  ++Q  
Sbjct: 59  RGIVFAHRDFNLLLDEIANNRPFYLYTGRGPSSKTMHIGHTIPFLLCKYMQDA 111


>gi|254839593|pdb|3I05|A Chain A, Tryptophanyl-Trna Synthetase From Trypanosoma Brucei
 gi|254839594|pdb|3I05|B Chain B, Tryptophanyl-Trna Synthetase From Trypanosoma Brucei
          Length = 395

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +   L D+  S      Y G   ++ S+H GHL   M   WLQ +   P
Sbjct: 54  FLRRGIFFSHRDLNLLLDVYESGQPFYLYTGRGPSSESMHMGHLIPFMFTKWLQDSFRVP 113

Query: 71  ISL 73
           + +
Sbjct: 114 LVI 116


>gi|157369649|ref|YP_001477638.1| tryptophanyl-tRNA synthetase II [Serratia proteamaculans 568]
 gi|157321413|gb|ABV40510.1| tryptophanyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 335

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 60/229 (26%), Gaps = 25/229 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  SLH GH    +     LQ+  H+   L+     +         +      Q+I  N
Sbjct: 11  PTG-SLHLGHYVGSLRQRVELQQH-HQQTVLVADLQGL---------TDNGNNPQKISTN 59

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +  +       +     KT   + +    L  +    L     +    N  +  E +   
Sbjct: 60  VLNLVA-DYLAVGICPQKTTICLQSALPALAELTMYYLNLVSVARLERNPTVKSEIMEKD 118

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNY--------DCRLQMGGSDQWGNIICGIDLGE 214
             R     F    Y + QA D       +            Q     +  N I G  +  
Sbjct: 119 FSRSLPAGF--LVYPVSQAADITAFGATHVPVGDDQLPMLEQTNEIVRRFNHIVGRQVLT 176

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             +         P L      KM K+    I L  +    +        
Sbjct: 177 ECQPLLSHVSRLPGL--DGQGKMSKSRGNTITLGADADRVHKAVMSMFT 223


>gi|72387447|ref|XP_844148.1| tryptophanyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62360656|gb|AAX81067.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70800680|gb|AAZ10589.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 389

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +   L D+  S      Y G   ++ S+H GHL   M   WLQ +   P
Sbjct: 48  FLRRGIFFSHRDLNLLLDVYESGQPFYLYTGRGPSSESMHMGHLIPFMFTKWLQDSFRVP 107

Query: 71  ISL 73
           + +
Sbjct: 108 LVI 110


>gi|261327309|emb|CBH10285.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 389

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +   L D+  S      Y G   ++ S+H GHL   M   WLQ +   P
Sbjct: 48  FLRRGIFFSHRDLNLLLDVYESGQPFYLYTGRGPSSESMHMGHLIPFMFTKWLQDSFRVP 107

Query: 71  ISL 73
           + +
Sbjct: 108 LVI 110


>gi|255264455|ref|ZP_05343797.1| ribosomal large subunit pseudouridine synthase B [Thalassiobium sp.
           R2A62]
 gi|255106790|gb|EET49464.1| ribosomal large subunit pseudouridine synthase B [Thalassiobium sp.
           R2A62]
          Length = 267

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++    G  +  ++ +AG   S  EA R +++  +++N+ +I +  L +   D  S
Sbjct: 5   PENTGPTGQRIAKVLARAG-VASRREAERMIEAGRVRVNSKLIESPALNVVPSDRIS 60


>gi|94733608|emb|CAK04286.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 87

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 21/71 (29%), Gaps = 2/71 (2%)

Query: 11 ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12 QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71 ISLMGGGTSII 81
            L     + +
Sbjct: 70 TILFADLHAYL 80


>gi|167380825|ref|XP_001733296.1| tryptophanyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165902531|gb|EDR28330.1| tryptophanyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 359

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           LD +     +  Y G   ++ +LH GHL   +   +LQ  
Sbjct: 68  LDDVEKGNKIYLYTGRGPSSDALHLGHLIPFIFTKYLQDA 107


>gi|331699050|ref|YP_004335289.1| tryptophanyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326953739|gb|AEA27436.1| tryptophanyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 341

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 74/235 (31%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T+ S H G+    +     LQ   H     +    +I  D              + 
Sbjct: 15  GIQPTSDSFHLGNYLGAVRQWVALQDE-HDAFYFVPDLHAITVD-------------HDP 60

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +    + +   +  +  G       +          +   +L  I  F   +RM  F+  
Sbjct: 61  KTLAARTRNAAAQLLALGLDPDKCTLFVQSHVPEHAQLAWVLSCITGFGEASRMTQFKD- 119

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +S  +     +   F Y IL A D + L +     +   G DQ  ++    DL +R    
Sbjct: 120 KSAKQGADRTTVGLFTYPILMAADVL-LYQADQVPV---GEDQRQHLELTRDLAQRFNTR 175

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
               F +  P + T +           KM K+ S    + + +  P    +  R+
Sbjct: 176 FGTTFVVPEPYILTGAAKIQDLQDPAIKMSKSASTPSGIIELLDDPKVSAKKIRS 230


>gi|149239614|ref|XP_001525683.1| tryptophanyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451176|gb|EDK45432.1| tryptophanyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 422

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 12  LSERGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
             +RG      + R+L  +            Y G   ++ S+H GH+   +   WLQ 
Sbjct: 71  FLKRGVFF---SERDLHRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQD 125


>gi|302205610|gb|ADL09952.1| tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           C231]
 gi|308275846|gb|ADO25745.1| tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           I19]
          Length = 387

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 74/242 (30%), Gaps = 31/242 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                  G   TA S H G+    +     LQ  G+     +    +I  D         
Sbjct: 53  KKQRVLSGIQPTADSYHLGNYLGALKQWIDLQD-GYDAFYFIPDLHAITVD--------- 102

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +E+++            +  G     + +          +   ++  +  F   +R
Sbjct: 103 -QDPKELRQRTIAGAAQL---LALGIDPEKSTLFVQSHVPEHAELGWIMTCLTGFGEASR 158

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+  +S  +     S   F Y +L A D + L +     +   G DQ  ++     L
Sbjct: 159 MTQFKD-KSAKRGADRTSAGLFTYPMLMAADIL-LYRPQLVPV---GEDQRQHLELTRTL 213

Query: 213 GERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ER      K F +   ++   +           KM K+ +    L   +  P    +  
Sbjct: 214 AERFNSRFKKTFVVPEGIIPEGAAKIYDLQDPTSKMSKSGTNPKGLINLLDEPKVSIKRI 273

Query: 262 RN 263
           ++
Sbjct: 274 KS 275


>gi|300857883|ref|YP_003782866.1| tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685337|gb|ADK28259.1| Tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
          Length = 360

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 74/242 (30%), Gaps = 31/242 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                  G   TA S H G+    +     LQ  G+     +    +I  D         
Sbjct: 26  KKQRVLSGIQPTADSYHLGNYLGALKQWIDLQD-GYDAFYFIPDLHAITVD--------- 75

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +E+++            +  G     + +          +   ++  +  F   +R
Sbjct: 76  -QDPKELRQRTIAGAAQL---LALGIDPEKSTLFVQSHVPEHAELGWIMTCLTGFGEASR 131

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+  +S  +     S   F Y +L A D + L +     +   G DQ  ++     L
Sbjct: 132 MTQFKD-KSAKRGADRTSAGLFTYPMLMAADIL-LYRPQLVPV---GEDQRQHLELTRTL 186

Query: 213 GERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ER      K F +   ++   +           KM K+ +    L   +  P    +  
Sbjct: 187 AERFNSRFKKTFVVPEGIIPEGAAKIYDLQDPTSKMSKSGTNPKGLINLLDEPKVSIKRI 246

Query: 262 RN 263
           ++
Sbjct: 247 KS 248


>gi|271962808|ref|YP_003337004.1| tryptophan--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270505983|gb|ACZ84261.1| Tryptophan--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 334

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 62/188 (32%), Gaps = 20/188 (10%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     +Q+ GH     +    +I  D  ++ E+ R       
Sbjct: 9   GIQPTADSFHLGNYLGAVRQYVAMQE-GHDAFYCVVDLHAITVD--YQPETLRRRTRVAA 65

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
               +               ++     +   W        +L  +       RM  F+  
Sbjct: 66  ---AQLFAAGLDPERSTVFVQSHVREHSELAW--------VLICLTGMGEAGRMTQFKD- 113

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +S    E S S   F Y ILQA D + L +     +   G+DQ  ++    DL +R    
Sbjct: 114 KSAKSGESSASVGLFTYPILQAADIL-LYQADKVPV---GADQKQHLELTRDLAQRFNHR 169

Query: 220 KLFALTSP 227
                T P
Sbjct: 170 FGETFTLP 177


>gi|313676846|ref|YP_004054842.1| RNA-binding s4 domain protein [Marivirga tractuosa DSM 4126]
 gi|312943544|gb|ADR22734.1| RNA-binding S4 domain protein [Marivirga tractuosa DSM 4126]
          Length = 286

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             + +  + + E+  G+ L   I  AG   S  EA +H+    +K+NN +++    ++K 
Sbjct: 38  SKLKSAEVKEKELKEGIRLNKFISNAGIC-SRREADKHIADGKVKVNNKVVTELGFKVKP 96

Query: 394 QD 395
            D
Sbjct: 97  MD 98


>gi|296816497|ref|XP_002848585.1| tryptophanyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839038|gb|EEQ28700.1| tryptophanyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 433

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 80  RGLFFSHRDFDKILDKYEYGEPFFLYTGRGPSSDALHLGHTIPFAFTKWLQDVFDVPLVI 139

Query: 74  M 74
           M
Sbjct: 140 M 140


>gi|71405894|ref|XP_805528.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70868973|gb|EAN83677.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 389

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 51/156 (32%), Gaps = 19/156 (12%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
            LD+  S      Y G   ++ S+H GHL   +   WLQ     P+ +            
Sbjct: 63  LLDVYESGQPFYLYTGRGPSSESMHMGHLIPFIFTKWLQDAFKVPLVI-----------Q 111

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             D+ +   R+ ++++  +         I  G       +  +  ++  +          
Sbjct: 112 MTDDEKFFFRNIDMEQIEKMTTENIKDIIAMGFDPELTFIFRDFDYMGQM--------YR 163

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           +   + R  +   VR     +   +   + +  +QA
Sbjct: 164 TVAEIERTFTASQVRGCFGFKMEDNCGRWMFPAIQA 199


>gi|322821704|gb|EFZ27958.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 389

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 51/156 (32%), Gaps = 19/156 (12%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
            LD+  S      Y G   ++ S+H GHL   +   WLQ     P+ +            
Sbjct: 63  LLDVYESGQPFYLYTGRGPSSESMHMGHLIPFIFTKWLQDAFKVPLVI-----------Q 111

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             D+ +   R+ ++++  +         I  G       +  +  ++  +          
Sbjct: 112 MTDDEKFFFRNIDMEQIEKMTTENIKDIIAMGFDPELTFIFRDFDYMGQM--------YR 163

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           +   + R  +   VR     +   +   + +  +QA
Sbjct: 164 TVAEIERTFTASQVRGCFGFKMEDNCGRWMFPAIQA 199


>gi|302330163|gb|ADL20357.1| tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           1002]
          Length = 342

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 31/242 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                  G   TA S H G+    +     LQ  G+     +    +I  D         
Sbjct: 8   KKQRVLSGIQPTADSYHLGNYLGALKQWIDLQD-GYDAFYFIPDLHAITVD--------- 57

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +E+++            +  G     + +          +   ++  +  F   +R
Sbjct: 58  -QDPKELRQRTIAGAAQL---LALGIDPEKSTLFVQSHVPEHAELGWIMTCLTGFGEASR 113

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+  +S  +     S   F Y +L A D + L +     +   G DQ  ++     L
Sbjct: 114 MTQFKD-KSAKRGADRTSAGLFTYPMLMAADIL-LYRPQLVPV---GEDQRQHLELTRTL 168

Query: 213 GERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ER      K + +   ++   +           KM K+ +    L   +  P    +  
Sbjct: 169 AERFNSRFKKTYVVPEGIIPEGAAKIYDLQDPTSKMSKSGTNPKGLINLLDEPKVSIKRI 228

Query: 262 RN 263
           ++
Sbjct: 229 KS 230


>gi|295103783|emb|CBL01327.1| tryptophanyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 353

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 64/233 (27%), Gaps = 28/233 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKERVRLQNTGEYDEIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G       +        L  + +        S    N  +  E 
Sbjct: 61  QNI---LQVALDYLACGLDPNKVHIFIQSMVPQLTELSFYYQNLVTVSRLQRNPTVKSEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGI 210
                +    + F  F Y I QA D                    Q        N + G 
Sbjct: 118 QMRNFEASIPVGF--FCYPISQAADITAFKATTVPAGEDQKPMIEQCCEIVHKFNSVYGE 175

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            L E        A    L       KM K+L   I+L++E        +    
Sbjct: 176 TLVEPQIVLPQNAACLRLPGIDGKAKMSKSLGNCIYLSEEPEDIEKKVKSMFT 228


>gi|239831305|ref|ZP_04679634.1| hemolysin A [Ochrobactrum intermedium LMG 3301]
 gi|239823572|gb|EEQ95140.1| hemolysin A [Ochrobactrum intermedium LMG 3301]
          Length = 253

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 24/51 (47%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +S +   R + L  L+V+ G   + + AR  ++   +K++   ++     +
Sbjct: 1   MSGEAGDRNLRLDQLLVELGLFATRSRARDAIQRGTVKVDGKPVTKPGQTV 51


>gi|152967912|ref|YP_001363696.1| tryptophanyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151362429|gb|ABS05432.1| tryptophanyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 346

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 79/238 (33%), Gaps = 37/238 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSI-IG-DPSFRDESRRMMRS 96
           G   T+ SLH G+    +   W  LQ T H  +  +    ++ +G DP     + R    
Sbjct: 20  GMQPTSGSLHLGNYLGALK-QWVALQDT-HDALYCVVDLHALTVGPDP----AALRERTR 73

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               + +        S +   +            W        +L  +  +    RM  F
Sbjct: 74  WTAAQYVAAGVDPERSALFVQSHVPAHA---QLAW--------VLSCLTGYGEAARMTQF 122

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +  +S  +   S +   F Y +L A D + L +  +  +   G DQ  ++    +L +R 
Sbjct: 123 KD-KSARQGTDSTTVGLFTYPVLMAADIL-LYQAAEVPV---GEDQRQHLELTRNLAQRF 177

Query: 217 K--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                  F +  P +   +           KM K+ S    +   M  P    +  R+
Sbjct: 178 NARFGDTFTVPEPFIPKETAKIFDLQDPGAKMSKSSSSPNGIVDVMDDPKVTAKKIRS 235


>gi|295838560|ref|ZP_06825493.1| tryptophan-tRNA ligase [Streptomyces sp. SPB74]
 gi|197697815|gb|EDY44748.1| tryptophan-tRNA ligase [Streptomyces sp. SPB74]
          Length = 337

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 76/245 (31%), Gaps = 31/245 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   +A S H G+    +     LQ+T H    ++    +I         
Sbjct: 1   MASERTRVLSGIQPSAGSFHLGNYLGAVRQWVALQET-HDAFYMVVDLHAIT-------- 51

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                    ++ N         +    G     + +          +   ++  +  F  
Sbjct: 52  --VPQDPATLRANTRLSAAQLLAA---GIDPERSALFVQSHMREHAELAWVMNCLTGFGE 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S  +  +  +   F Y +LQ  D + L + +   +   G DQ  ++   
Sbjct: 107 ASRMTQFKD-KSAKQGAEGTTVGLFTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER      + F +    +   +           KM K+ +    L   M  P    
Sbjct: 162 RDLAERFNARYGETFVVPEAYIVKETAKIYDLQEPTAKMSKSAASPKGLVNLMDEPKATA 221

Query: 259 QYWRN 263
           +  R+
Sbjct: 222 KKIRS 226


>gi|56697819|ref|YP_168190.1| RNA pseudouridylate synthase family protein [Ruegeria pomeroyi
           DSS-3]
 gi|56679556|gb|AAV96222.1| RNA pseudouridylate synthase family protein [Ruegeria pomeroyi
           DSS-3]
          Length = 387

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  ++ +AG   S  EA R +++  + +N  +I +  L +  +D
Sbjct: 6   PPGERIAKILSRAG-VASRREAERMIEAGRVAVNGKVIDSPALNVTERD 53


>gi|255037667|ref|YP_003088288.1| pseudouridine synthase [Dyadobacter fermentans DSM 18053]
 gi|254950423|gb|ACT95123.1| pseudouridine synthase [Dyadobacter fermentans DSM 18053]
          Length = 555

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 8/123 (6%)

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
             K + ++    +     E      G E        A      +   +  P+      E 
Sbjct: 260 FKKKEDRDEKPYRSRFQDEEEQDRSGLERRVGRYETAPRYNLDNYEQKKKPSARHKDKEE 319

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           +  + L   I  AG   S  EA   + S  I +N  I++    +++  D        + +
Sbjct: 320 TDEIRLNRYIANAGIC-SRREADDLISSGQISVNGKIVTEMGYKVRPTD-------VVKY 371

Query: 407 GKK 409
           GKK
Sbjct: 372 GKK 374


>gi|72004278|ref|XP_780428.1| PREDICTED: hypothetical protein isoform 3 [Strongylocentrotus
           purpuratus]
 gi|115933993|ref|XP_001192644.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 424

 Score = 47.1 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 70/237 (29%), Gaps = 30/237 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L    ++     Y G   +++S+H GHL   +   WLQ     P+ +             
Sbjct: 101 LTRYEAKKPFFLYTGRGPSSTSMHVGHLIPFIFTKWLQDVFDVPLVI------------- 147

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIG 145
              +       +  +  E  K  + +             +N       + YI        
Sbjct: 148 -QLTDDEKFLWKDLKAEEANKLAYENAKDIIALG---FDVNKTFIFSDMNYIASCPEFYR 203

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE--------LAKNYDCRLQM 197
           +   V + +++  V+       S    + ++  +QA               K+  C +  
Sbjct: 204 NMLKVQKCVTYNQVKGIFGFGDSDCIGKISFPAVQASPSFSNSFPAIFGTKKDIPCLIPC 263

Query: 198 GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              DQ        D+  RL  PK   + +   P L  A         + +I+L    
Sbjct: 264 -AIDQDPYFRMTRDVAPRLGYPKPALIHSTFFPALQGAQTKMSASDPNSSIFLTDTP 319


>gi|167523649|ref|XP_001746161.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775432|gb|EDQ89056.1| predicted protein [Monosiga brevicollis MX1]
          Length = 530

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 69/213 (32%), Gaps = 20/213 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+      +  Y G   ++ ++H GHL   M   +LQ     P+ +      +  D  F
Sbjct: 206 LDLKEQGKPIYLYTGRGPSSQAMHLGHLIPFMFTKYLQDVFDVPLVI-----QMTDDEKF 260

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
             +S   +    +       +      I  G  +    +  +   +    Y ++L     
Sbjct: 261 LFKSELTLDEDPVTGVFALTRENAKDIIACGFNREKTYIFADTDIMGGAFYKNVL----- 315

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-----LAKNYDCRLQMGGSD 201
              + R +S          +++ +  + ++  +QA          + +     L     D
Sbjct: 316 --RIQRRVSLHQACKIFGFDENANIGKISFAAIQASPSFPSSFPGVLQQSAACLIPCAID 373

Query: 202 QWGNIICGIDLGERLKTPK---LFALTSPLLTT 231
           Q        D+   L+  K   + ++  P +T 
Sbjct: 374 QDPYFRMTRDVAPALREEKPALVHSVFFPAMTG 406


>gi|227549559|ref|ZP_03979608.1| RNA-binding S4 domain protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078323|gb|EEI16286.1| RNA-binding S4 domain protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 95

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  D  S  + L   +  A  A S  +A+  + S  + +N  ++++    +   D
Sbjct: 3   MDVDISSDSIKLGQFLKLANLAESGGQAKELIASGEVAVNGEVVTSRGHSLGDAD 57


>gi|42572249|ref|NP_974219.1| tRNA synthetase class I (W and Y) family protein [Arabidopsis
           thaliana]
 gi|332640583|gb|AEE74104.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 402

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 16/229 (6%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
             LD          Y G   ++ +LH GHL   M   +LQ+   K   ++          
Sbjct: 78  EILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEA-FKVPLVI---------- 126

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
              D+ + + ++  ++E+    +      I  G   T   + ++  ++    Y ++++ +
Sbjct: 127 QLTDDEKSIWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVK-V 185

Query: 145 GSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           G   ++N+ +            + S   ++       ++  +   K+    L     DQ 
Sbjct: 186 GKCVTLNKAMGIFGFSGEDPIAKLSFPPVQAVPSFPSSFPHLFPGKDNLRCLIPCAIDQD 245

Query: 204 GNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                  D+  RL   K   + +   P L   +G       + AI++  
Sbjct: 246 PYFRMTRDVAPRLGYSKPALIESTFFPALQAKNGKMSASDPNSAIYVTD 294


>gi|154249571|ref|YP_001410396.1| tryptophanyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153507|gb|ABS60739.1| tryptophanyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 327

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 96/340 (28%), Gaps = 43/340 (12%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   +H GH          LQ  GH     +    ++                ++ 
Sbjct: 6   GIRPTGK-VHVGHYVGVFENWIKLQNEGHDTFYFIADWHAL------------TTHYEDT 52

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            E     K +  + I  G  K+   + +       +  I  +    S+  + R+ +++ +
Sbjct: 53  SELKHYTKDLARTLIAVGLDKSTLFVQSAVKEHAELMLIFSMVTPLSW--LERVPTYKEM 110

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           + +L  +   +     Y +LQA D + + K     +   G DQ  +I    ++  R    
Sbjct: 111 KQQLANKDLSNAGFLMYPVLQAADIL-IYKADGVPV---GEDQVYHIELTREIARRFNYI 166

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR-------- 262
                   PK      P L    G KM K+    I L                       
Sbjct: 167 FKKEIFPEPKELLSKVPKLLGTDGRKMSKSYGNTIPLITTENELSKMVLPMVTDPARKRR 226

Query: 263 ----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
               N ++  V  + K   T    E  +       +           +   +  +     
Sbjct: 227 TDPGNPENCPVWDYHKAFGTADNEEEKQWVFEGCTQAKIGCVDCKKLLLKHMTEKLSPIW 286

Query: 319 AATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI 356
               ++    +    ++       I+K  +      + ++
Sbjct: 287 ERYNSITEGQVQEIIENGNEKAREIAKQTMEEVRDAVKIM 326


>gi|328863709|gb|EGG12808.1| hypothetical protein MELLADRAFT_51354 [Melampsora larici-populina
           98AG31]
          Length = 410

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           L  RG         + LD          Y G   +  S+H GH+   ++  WLQ+
Sbjct: 64  LLRRGMFFSHRELDQILDRYEQGKPFYLYTGRGPSTGSMHLGHMVPFIVTQWLQE 118


>gi|323144677|ref|ZP_08079262.1| tryptophan--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415573|gb|EFY06322.1| tryptophan--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 356

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 60/199 (30%), Gaps = 24/199 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G+  K   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKERVALQNSGNYDKVFIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G     + +        L  + +  +     +    N  +  E 
Sbjct: 61  QNI---MQVALDYLSCGIDPNKSCIFIQSMVRELAELAFYYMNLVTVARVQRNPTVKNEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +   +    L F  F+Y + QA D               G DQ   I    ++  +   
Sbjct: 118 KQKNFEASIPLGF--FSYPVSQAADITAFR----ATTVPVGEDQEPMIEQCREIVRKFNE 171

Query: 219 PKLFALTSPLLTTASGTKM 237
                L  P +   S    
Sbjct: 172 IYGETLVEPEIVLPSNKAC 190


>gi|156841017|ref|XP_001643885.1| hypothetical protein Kpol_495p25 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114513|gb|EDO16027.1| hypothetical protein Kpol_495p25 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 432

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 70/230 (30%), Gaps = 17/230 (7%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+         Y G   ++ S+H GH+T  +   WLQ+    P+ +             
Sbjct: 95  LDLYEQGKPFFLYTGRGPSSDSMHMGHMTPFIFTKWLQEVFDVPLVI------------E 142

Query: 87  RDESRRMMRSQEIQEN--IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  + +  Q++  N   +  +      I  G    +  + ++  ++    Y  ++R  
Sbjct: 143 LTDDEKFLFKQKLTINDVKKYARENAKDIIAVGFNPENTFIFSDLEYMGKGFYETVVRVS 202

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                      F    S    +   + ++       ++  V         L     DQ  
Sbjct: 203 RQITGSTAKAVFGFTDSDCIGKIHFASIQIASAFPSSFPDVLGLPEKTPCLIPCAIDQDP 262

Query: 205 NIICGIDL---GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                 D+    +  K   + +   P L  ++        + AI++    
Sbjct: 263 YFRVCRDVADKLKFHKPALIHSKFFPALQGSTTKMSASNETSAIFMTDTP 312


>gi|23465615|ref|NP_696218.1| hemolysin-like protein [Bifidobacterium longum NCC2705]
 gi|23326286|gb|AAN24854.1| hemolysin-like protein with S4 domain found in bacteria and plants
           [Bifidobacterium longum NCC2705]
          Length = 280

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +    A   A    D     ++M    I        + +  ++V +G   S  +A+R +
Sbjct: 1   MKCWMVAPCRATPLVDGGPKGRYMTEQHIDPATPLDRLDM--MLVASGLVESRAKAQRLI 58

Query: 373 KSNAIKINNSIISNEKLQIKLQD 395
           K+  ++++   I+     +K   
Sbjct: 59  KAGHVRVDGETITKPSFMVKAGH 81


>gi|256397068|ref|YP_003118632.1| tryptophanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363294|gb|ACU76791.1| tryptophanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 346

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 73/249 (29%), Gaps = 41/249 (16%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII--GDPS-FR 87
           S G    + G   TA S H G+    +     LQ+T H  +  +    +I    DP   R
Sbjct: 10  SSGRKRVFSGIQPTADSFHVGNYLGAIRQWVPLQET-HDTVYCVVDLHAITVEQDPKLLR 68

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
             +R                            ++         W            +   
Sbjct: 69  QRTRVAAAQLMAAG--------IDPGRSTLFVQSHVPEHAQLAW-----------VLTCM 109

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLE--FNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
                       + +  ++ S +     F Y +L A D + L    +  +   G DQ  +
Sbjct: 110 TGFGEAGRMTQFKDKSGKQGSANTNVGLFTYPMLMAADVL-LYNADEVPV---GEDQRQH 165

Query: 206 IICGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSP 254
           +    DL +R        F +  P +  A+G          KM K+ S    + + +  P
Sbjct: 166 LELTRDLAQRFNGRYGAYFTVPDPYIIKATGKITDLQEPGAKMSKSASSPAGIIELLDDP 225

Query: 255 YNFWQYWRN 263
               +  R+
Sbjct: 226 KVSAKKIRS 234


>gi|149194990|ref|ZP_01872083.1| tryptophanyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134911|gb|EDM23394.1| tryptophanyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 322

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 96/331 (29%), Gaps = 42/331 (12%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH   ++     LQ   ++ +  +    ++                 + 
Sbjct: 6   GMRPTGK-LHLGHYIGVIKNWKNLQDN-YQCMFFVADWHAL-------------STKYDE 50

Query: 100 QENI-EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             N+ E    +   +I  G     A +          +   +   I     + R  +++ 
Sbjct: 51  GLNLKELSIELIKEWIACGIDPQKATLFIQSAIKEHAELYLIFNMITPISWLERNPTYKD 110

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
             ++ + ++  +     Y +LQ  D V     YD  L   G DQ  ++    ++      
Sbjct: 111 AMNQPEYKKKNNAGFLTYPVLQTADIV----IYDADLVPIGEDQKPHLELAREIVRHFHY 166

Query: 219 --------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                        LT    L    G KM K+ + AI+L++           W+ +  A  
Sbjct: 167 IYKMEIFKEPKEILTEVARLPGLDGRKMSKSYNNAIYLDETSDEI------WQKVRMAKT 220

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV------HGREEAEKAATAA 323
                + T     E+  +        ++ +     E             +  A+      
Sbjct: 221 DPARIKKTDPGHPEVCIVFDYHKAFSSKEEVKEIEEACKNGTIGCVECKKRCAKNIEKII 280

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
               D     Q+   + I K+   +   L  
Sbjct: 281 APIRDKKASLQNDEILDIIKEGNKKAKSLAE 311


>gi|238917261|ref|YP_002930778.1| tryptophanyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872621|gb|ACR72331.1| tryptophanyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 363

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++++
Sbjct: 11  PTGR-LHLGHYVGSLKRRVELQNSGEYEKIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +    +     K++  + +  + L  + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYLSVGIDPAKSNIFIQSQISQLTELTFYYMNLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFK----ATTVPVGEDQEPMIEQCREIVRKFNSVY 173

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             AL  P +             T    KM K+L   I+L+    +P    +   ++
Sbjct: 174 GEALVEPEILLPDNKACLRLPGTDGKAKMSKSLGNCIYLS---DTPEEVKKKVMSM 226


>gi|157364368|ref|YP_001471135.1| tryptophanyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157314972|gb|ABV34071.1| tryptophanyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 328

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 80/271 (29%), Gaps = 21/271 (7%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T    H G+    +     LQ+ G++    +    ++                 E 
Sbjct: 6   GVRPTGKP-HVGNYIGALKNWKKLQEEGNECFYFVADWHAL------------TTAYSET 52

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            E     + +  SF+  G     +++          +   L   I     + R+ +++ +
Sbjct: 53  DELKTFTREVMRSFLACGLNPEKSILFVQSAIKEHSELALLFSMIVPISWLERVPTYKEM 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           R +L  +   +     Y +LQA D + +       +   G DQ  ++    ++  R    
Sbjct: 113 RQQLSDKDLSNAGFLLYPVLQAADIL-MYLAEGVPV---GEDQTYHVELTREIARRFNYI 168

Query: 220 KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS---FAKRL 276
                  P    +   K+  T    +  +   T P              +++     +R 
Sbjct: 169 YGETFPEPKTLLSIIPKLPGTDGRKMSKSYGNTIPLENTLSNLEKSILPMMTDPARKRRT 228

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
                 +       +  EIN+ +     E  
Sbjct: 229 DPGNPEKCPVWDYHKAFEINDEESQWVIEGC 259


>gi|50426727|ref|XP_461961.1| DEHA2G09548p [Debaryomyces hansenii CBS767]
 gi|49657631|emb|CAG90429.1| DEHA2G09548p [Debaryomyces hansenii]
          Length = 421

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 22/248 (8%)

Query: 12  LSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             +RG      + R+L  +            Y G   ++ S+H GH+   +   WLQ   
Sbjct: 72  FLKRGVFF---SERDLTKILGLYEHGESFFLYTGRGPSSDSMHLGHMVPFIFTKWLQDVF 128

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALML 126
             P+ +    T         D+ + + + +   ++++   K      I  G    +  + 
Sbjct: 129 DVPLVI--ELT---------DDEKFLFKPKLTIDDVKSFSKANAKDIIAVGFNPENTFIF 177

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           ++  ++ S  Y +++R      +      F    S    +   + ++       ++  V 
Sbjct: 178 SDLDYMNSAFYENVVRTSRQITTSTAKAVFGFQDSDCIGKIHFASIQIATAFPSSFPGVL 237

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
                   L     DQ        D+ ++LK  K   + A   P L  +S        + 
Sbjct: 238 DLPPKTPCLIPCAIDQDPYFRVCRDVADKLKFSKPSLIHAKFFPALQGSSTKMSASDTTT 297

Query: 244 AIWLNKEM 251
           AI++    
Sbjct: 298 AIFMGDTQ 305


>gi|291456443|ref|ZP_06595833.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           breve DSM 20213]
 gi|291381720|gb|EFE89238.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           breve DSM 20213]
          Length = 248

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +    S ++A+R +K+  ++++   I+     +K   
Sbjct: 10  LVASDLVESRSKAQRLIKAGHVRVDGETITKPSFMVKAGH 49


>gi|148272145|ref|YP_001221706.1| tryptophanyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830075|emb|CAN01004.1| trpS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 337

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 69/245 (28%), Gaps = 24/245 (9%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +A SL  G+    L+    LQ T H  +  +    + I  P      R   R    
Sbjct: 10  GMQPSADSLQIGNYIGALLQWKELQTT-HDAVFCVVDLHA-ITVPQEPAALRASTRRTAA 67

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q             +     ++         W+ +      L   G    + +       
Sbjct: 68  QYIAAG----IDPAVSTLFVQSHVSAHTQLAWILN-----TLTGFGEASRMTQFKD---- 114

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +S+ +   + +   F Y  L A D +     Y   +   G DQ  ++    DL +R    
Sbjct: 115 KSQKQGADATTLGLFAYPTLMAADIL----LYGTEVVPVGDDQKQHVELTRDLAKRFNSR 170

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
              +F +  P++   +       L        + ++      +  +            +T
Sbjct: 171 FGDVFRIPEPMIQKDTARIY--DLQDPTSKMSKSSASDAGVVWLLDEPAKTAKKIRSAVT 228

Query: 278 TLPMS 282
                
Sbjct: 229 DTERE 233


>gi|115667647|ref|XP_001200340.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
          purpuratus]
 gi|115699702|ref|XP_798138.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
          purpuratus]
          Length = 138

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 27 LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          LD+  ++     Y G   ++SS+H GHL   +   WLQ 
Sbjct: 42 LDLYEAKKPFFLYTGRGPSSSSMHVGHLIPFIFTKWLQD 80


>gi|328873988|gb|EGG22354.1| tryptophanyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 395

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 77/229 (33%), Gaps = 33/229 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            ++ SLH GHL   +   +LQ+  + P+ +              ++ + + +   ++E+I
Sbjct: 90  PSSGSLHFGHLVPFIFTKYLQEVFNVPLVI-----------QMTNDEKFLWKDITLEESI 138

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                     I  G       + +N  ++        + +IG   ++N+      V+   
Sbjct: 139 HYTVENVKDIIALGFDIEKTFIFSNLDYI--QYLYPNVVKIGKCVTLNQ------VKGIF 190

Query: 164 KREQSLSFLEFNYMILQAY-----DFVELAKNYDCRLQM------GGSDQWGNIICGIDL 212
               S S  +F +  +QA       F  +   Y  +++          DQ        D+
Sbjct: 191 GFGDSDSCGKFAFPPIQAAPSFPDSFPHIFGKYGDQIKSIRCLIPCAIDQDPYFRMTRDV 250

Query: 213 GERLKTPK---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
             RL   K   + +   P L   +        + A++L+       +  
Sbjct: 251 ASRLGYQKPSLIHSKFFPALQGHNTKMSASDQNSAVYLSDTPQQVKDKV 299


>gi|322688777|ref|YP_004208511.1| hypothetical protein BLIF_0590 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320460113|dbj|BAJ70733.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 257

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|320458888|dbj|BAJ69509.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 257

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|296453816|ref|YP_003660959.1| hemolysin A [Bifidobacterium longum subsp. longum JDM301]
 gi|296183247|gb|ADH00129.1| hemolysin A [Bifidobacterium longum subsp. longum JDM301]
          Length = 257

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|227546214|ref|ZP_03976263.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239622217|ref|ZP_04665248.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312133063|ref|YP_004000402.1| rRNA methylase [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481833|ref|ZP_07940861.1| hemolysin TlyA family protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690767|ref|YP_004220337.1| hypothetical protein BLLJ_0577 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|227213195|gb|EEI81067.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239514214|gb|EEQ54081.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517152|emb|CBK70768.1| hemolysin TlyA family protein [Bifidobacterium longum subsp. longum
           F8]
 gi|311774055|gb|ADQ03543.1| Putative rRNA methylase [Bifidobacterium longum subsp. longum
           BBMN68]
 gi|316916770|gb|EFV38164.1| hemolysin TlyA family protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455623|dbj|BAJ66245.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 257

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|213692730|ref|YP_002323316.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213524191|gb|ACJ52938.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 276

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 38  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 77


>gi|297192557|ref|ZP_06909955.1| tryptophanyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718098|gb|EDY62006.1| tryptophanyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 337

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 77/256 (30%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +     A  G   TA S H G+    +     LQ+T H    ++    + I  P    E
Sbjct: 1   MASSRPRALSGIQPTAGSFHLGNYLGAIRQYVALQET-HDAFYMVVDLHA-ITVPQDPAE 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A +            ++ L   G    
Sbjct: 59  LRANTRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLGW---------VMNCLTGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S        +   F Y ILQ  D + L +     +   G DQ  ++   
Sbjct: 110 MTQFKD----KSARHGADRATVGLFTYPILQVADIL-LYQADAVPV---GEDQRQHVELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER      + F + +P +               KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNGRFGRTFTVPAPYIVKEVAKIYDLQDPTIKMSKSASTPKGLINLLDEPKTTA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  ++   D   V+ F
Sbjct: 222 KKVKSAVTDTDTVIRF 237


>gi|46191091|ref|ZP_00206673.1| COG1189: Predicted rRNA methylase [Bifidobacterium longum DJO10A]
 gi|189439661|ref|YP_001954742.1| putative rRNA methylase [Bifidobacterium longum DJO10A]
 gi|189428096|gb|ACD98244.1| Putative rRNA methylase [Bifidobacterium longum DJO10A]
          Length = 257

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|225426426|ref|XP_002274369.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297742518|emb|CBI34667.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score = 46.7 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 75/245 (30%), Gaps = 25/245 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L         Y G++ +   +H          +  L      G +
Sbjct: 45  RSVGEECIQEDELMNLLRNKPEPICYDGFEPSGR-MHIAQGVMKTISVNKLT---SAGCR 100

Query: 70  PISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
               +    + + +    D +    +    I+        +    +++     +     +
Sbjct: 101 VKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLDGGKVEFLWSSKEINARAH 160

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           E W         + +I     + R++    +  R ++E+ LS  +  Y  +Q  D   L 
Sbjct: 161 EYW-------PRVMDIARRNKLPRIMRCVQIMGRSEQEE-LSAAQILYPCMQCADIFFLK 212

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAI 245
                 +   G DQ    +   +  + +K   K   L+  +L        KM K+   + 
Sbjct: 213 ----ADICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSS 268

Query: 246 WLNKE 250
              ++
Sbjct: 269 IFMED 273


>gi|82701924|ref|YP_411490.1| 30S ribosomal protein S4 [Nitrosospira multiformis ATCC 25196]
 gi|90101698|sp|Q2YAX3|RS4_NITMU RecName: Full=30S ribosomal protein S4
 gi|82409989|gb|ABB74098.1| SSU ribosomal protein S4P [Nitrosospira multiformis ATCC 25196]
          Length = 208

 Score = 46.7 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 15/76 (19%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GF  S +EAR+ ++ N I +N   I+    Q+K  D     
Sbjct: 89  GENLLQLLECRLDTVSYRMGFGASRSEARQIVRHNGILVNGRRINIPSYQVKPGDVIEVA 148

Query: 401 NIKLSFGK-KNHIICH 415
                  K KNH+   
Sbjct: 149 E------KAKNHLRIK 158


>gi|88857019|ref|ZP_01131662.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88820216|gb|EAR30028.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 351

 Score = 46.7 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 64/230 (27%), Gaps = 27/230 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +    L +  ++   L+     +         +    +   +  NI
Sbjct: 30  PTG-SLHLGHFVGSLKQRVLLQQQYQQTILVADMQGL---------TDNGFKPTLVAANI 79

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +       +     KT   + +    L  +          +    N  +  E      
Sbjct: 80  LNLVA-DYLAVGIEPSKTTICLQSALPALAELTMYYSNLVTVARLERNPTVKNEIANKAF 138

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------ 217
            +     F    Y I QA D           + +G  DQ   I    ++  ++       
Sbjct: 139 GQSVPAGF--LTYPISQAADIT---GFMGTLVPVG-DDQLPMIEQTNEIVRKVNHIAGQT 192

Query: 218 ----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                  L + T  L+      KM K++   I+L  +  +     Q    
Sbjct: 193 ILVECKPLLSQTPRLVAPDGKNKMSKSMGNCIYLGSDPLAIRKAVQSMYT 242


>gi|294631032|ref|ZP_06709592.1| tryptophanyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292834365|gb|EFF92714.1| tryptophanyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 337

 Score = 46.7 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 78/261 (29%), Gaps = 43/261 (16%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSI--IGDPS 85
            +        G   TA S H G+      +     LQ++ H    ++    +I    DP+
Sbjct: 1   MATDRPRVLSGIQPTAGSFHLGNYLG--AVRQWVSLQES-HDAFYMLADLHAITVAQDPA 57

Query: 86  F-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             R  +R                                 +          +   ++  +
Sbjct: 58  ELRANTRVAAAQLLAAG----------------LDPDRCTLFVQSHVPEHAQLAWVMNCL 101

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
             F    RM  F+  +S  +     S   F Y ILQ  D + L + ++  +   G DQ  
Sbjct: 102 TGFGEAGRMTQFKD-KSAKQGADRTSVGLFTYPILQVADIL-LYQAHEVPV---GEDQRQ 156

Query: 205 NIICGIDLGERLKTPKLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTS 253
           +I    DL ER         T P   +   +           KM K+ S    L   +  
Sbjct: 157 HIELTRDLAERFNGRYGDTFTVPKAYILKETAKIYDLQEPTAKMSKSASTPKGLINLLDD 216

Query: 254 PYNFWQYWRN--IDDADVVSF 272
           P    +  R+   D   V+ +
Sbjct: 217 PKATAKKVRSAVTDTDTVIRY 237


>gi|320593392|gb|EFX05801.1| tryptophanyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 446

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +    L           Y G   ++ SLH GH   L    WLQ 
Sbjct: 72  RGLFFSHRDFDRILTRYERGEPFFLYTGRGPSSGSLHLGHTIPLQFTKWLQD 123


>gi|294814588|ref|ZP_06773231.1| Tryptophanyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|326442976|ref|ZP_08217710.1| tryptophanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294327187|gb|EFG08830.1| Tryptophanyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC
           27064]
          Length = 347

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 79/257 (30%), Gaps = 33/257 (12%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
           L +     A  G   TA S H G+    +     LQ+T H    ++    + I  P    
Sbjct: 10  LATGARPRALSGIQPTAGSFHLGNYLGAIRQYVALQET-HDAFYMVVDLHA-ITVPQDPA 67

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E R   R    Q     +     +          A +            ++ L   G   
Sbjct: 68  ELRANTRLAAAQLLAAGLDPDRCTLFIQSHVPEHAQLGW---------VMNCLTGFGEAS 118

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            + +       +S  +     +   F Y +LQ  D + L +     +   G DQ  +I  
Sbjct: 119 RMTQFKD----KSAKQGADRATVGLFTYPVLQVADIL-LYQADAVPV---GEDQRQHIEL 170

Query: 209 GIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNF 257
             DL ER        F++ +P +               KM K+ S    L   +  P   
Sbjct: 171 TRDLAERFNTRFGDTFSVPAPHIVKEVAKIYDLQDPAVKMSKSASTPKGLINLLDEPKAT 230

Query: 258 WQYWRN--IDDADVVSF 272
            +  ++   D   V+ F
Sbjct: 231 AKKVKSAVTDTDTVIRF 247


>gi|147815112|emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]
          Length = 385

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 75/245 (30%), Gaps = 25/245 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L         Y G++ +   +H          +  L      G +
Sbjct: 45  RSVGEECIQEDELMNLLRNKPEPICYDGFEPSGR-MHIAQGVMKTISVNKLT---SAGCR 100

Query: 70  PISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
               +    + + +    D +    +    I+        +    +++     +     +
Sbjct: 101 VKIWIADWFAQLNNKMGGDLKKIETVGRYLIEIWKAVGMDLDGGKVEFLWSSKEINARAH 160

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           E W         + +I     + R++    +  R ++E+ LS  +  Y  +Q  D   L 
Sbjct: 161 EYW-------PRVMDIARRNKLPRIMRCVQIMGRSEQEE-LSAAQILYPCMQCADIFFLK 212

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAI 245
                 +   G DQ    +   +  + +K   K   L+  +L        KM K+   + 
Sbjct: 213 ----ADICQLGMDQRKVNVLAREYCDDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSS 268

Query: 246 WLNKE 250
              ++
Sbjct: 269 IFMED 273


>gi|258565507|ref|XP_002583498.1| tryptophanyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237907199|gb|EEP81600.1| tryptophanyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 436

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 56/179 (31%), Gaps = 23/179 (12%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WL    H    +
Sbjct: 79  RGLFFSHRDFEKILDRYEAGEPFFMYTGRGPSSEALHLGHTIPFSFTKWL----HDVFDV 134

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWL 132
                     P  +D+ + + +     E+  K     +  I   G       + ++  ++
Sbjct: 135 ----------PLGKDDEKALFKDNLTFEDTYKFGLQNAKDIIACGFDPKKTFIFSDLEYV 184

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                +++          +++++F  VR      +S +     +  +Q       +   
Sbjct: 185 KGHMLMNVWE-------FSKLITFNQVRGAFGFNESTNIGRIMFPAVQCVAAFATSYPE 236


>gi|254393466|ref|ZP_05008605.1| tryptophanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197707092|gb|EDY52904.1| tryptophanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 344

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 79/257 (30%), Gaps = 33/257 (12%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
           L +     A  G   TA S H G+    +     LQ+T H    ++    + I  P    
Sbjct: 7   LATGARPRALSGIQPTAGSFHLGNYLGAIRQYVALQET-HDAFYMVVDLHA-ITVPQDPA 64

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E R   R    Q     +     +          A +            ++ L   G   
Sbjct: 65  ELRANTRLAAAQLLAAGLDPDRCTLFIQSHVPEHAQLGW---------VMNCLTGFGEAS 115

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            + +       +S  +     +   F Y +LQ  D + L +     +   G DQ  +I  
Sbjct: 116 RMTQFKD----KSAKQGADRATVGLFTYPVLQVADIL-LYQADAVPV---GEDQRQHIEL 167

Query: 209 GIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNF 257
             DL ER        F++ +P +               KM K+ S    L   +  P   
Sbjct: 168 TRDLAERFNTRFGDTFSVPAPHIVKEVAKIYDLQDPAVKMSKSASTPKGLINLLDEPKAT 227

Query: 258 WQYWRN--IDDADVVSF 272
            +  ++   D   V+ F
Sbjct: 228 AKKVKSAVTDTDTVIRF 244


>gi|315050009|ref|XP_003174379.1| tryptophanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342346|gb|EFR01549.1| tryptophanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 449

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +    LD          Y G   ++ +LH GH        WLQ 
Sbjct: 80  RGLFFSHRDFDRILDKYEYGEPFFLYTGRGPSSDALHLGHTIPFAFTKWLQD 131


>gi|94984558|ref|YP_603922.1| tryptophanyl-tRNA synthetase II [Deinococcus geothermalis DSM
           11300]
 gi|94554839|gb|ABF44753.1| tryptophanyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 342

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 26/219 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  +    L+    ++         +      +++++ +
Sbjct: 12  PTGP-LHIGHYVGSLRNRVALQHDYDTYILIADVQAL---------TDNFENPRKVRQAV 61

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++  +    +      T  ++ +    +  +    L     S    N  +  E  +   
Sbjct: 62  LEV-ALDYLAVGLDPAVTTFVIQSQVPEIAELTVFYLNLVTVSHLRQNPTVKTEIAQKGY 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
                  F  F Y + QA D           L   G DQ   I    ++  R        
Sbjct: 121 GEAVPAGF--FVYPVSQAADITAF----GAHLVPVGEDQLPMIEQTREIVRRFNHLYAPV 174

Query: 219 --PKL--FALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                      + L       KM K+L  AI+L+     
Sbjct: 175 LVEPQALVGEVARLPGLDGKAKMSKSLGNAIFLSDSADE 213


>gi|295098442|emb|CBK87532.1| tryptophanyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 333

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 80/313 (25%), Gaps = 38/313 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+     +  + S   + R  +         
Sbjct: 12  PTGP-LHLGHFVGSLRQRVALQHTHNQFVLIADLQGLTDNGSNPQKIRDNIPEVLADYLA 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             I              T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 71  AGI----------DPNLTTICLQSALPALAELTMLYMNIVTVARVERNPTVKNEIAQKGF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------- 216
            R   + F    Y I QA D               G DQ   I    ++  ++       
Sbjct: 121 ARSLPVGF--MAYPISQAADITAFKAEC----VPVGDDQLPMIEQTNEIVHKMNSLLPAP 174

Query: 217 ---KTPKLFALTSPLLTTASGTKMGKTLSGA-------IWLNKEMTSPYNFWQYWRNIDD 266
                  + + TS L     G KM K+L            +++ +++ Y    + +  D 
Sbjct: 175 VLRHCKAMLSDTSRLPGIDGGAKMSKSLGNTLHLSASEETIHRAVSAMYTDPHHLKVSDP 234

Query: 267 ADVV---SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
             +     F       P  E     K   +      ++   E          A      A
Sbjct: 235 GQIEGNVVFTYLDAFHPDKEKVAAMKAHYQAGGLGDRVCKNE-LEACLQELIAPMRERRA 293

Query: 324 MECFDMSIHSQHM 336
           M   D       +
Sbjct: 294 MYMQDKGELMAML 306


>gi|89053708|ref|YP_509159.1| pseudouridine synthase, Rsu [Jannaschia sp. CCS1]
 gi|88863257|gb|ABD54134.1| Pseudouridine synthase Rsu [Jannaschia sp. CCS1]
          Length = 296

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            G  +   + +AG   S  EA R +++  + +N ++I +  L +   D   
Sbjct: 3   DGERIAKRLSRAG-VASRREAERMIEAGRVSVNGAVIESPALNVTDADVIE 52


>gi|332308293|ref|YP_004436144.1| tryptophanyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175622|gb|AEE24876.1| tryptophanyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 340

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 79/286 (27%), Gaps = 39/286 (13%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPS 85
           +         T   G   T   LH GH    +     LQ   H    L+     +     
Sbjct: 1   MKNQLPTKRETILTGDRATGP-LHLGHYVGSLKQRVSLQDK-HDQTILVADMQGL----- 53

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
               +       ++  NI  +       +     KT   + +    L  +          
Sbjct: 54  ----TDNANTPSKVSSNILNVVA-DYLAVGIDPTKTTICLQSQLPALAELTMYYSNLVTI 108

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           +    N  +  E      +R     F    Y I QA D        +  L   G DQ   
Sbjct: 109 ARLERNPTVKSEIKSKGFERSVPAGF--LTYPISQAADITAF----NATLIPVGDDQLPM 162

Query: 206 IICGIDLGER----------LKTPKLFALTSPLLTTASGTKMGKTLSGAIW-------LN 248
           +    ++  +           +   L + TS L +T    KM KT+  AI        L 
Sbjct: 163 LEQTNEIVRKVNSLAGKPVLNECRPLLSQTSRLPSTDGKNKMSKTMGNAINLGACEKELR 222

Query: 249 KEMTSPYNFWQYWRNIDDADV---VSFAKRLTTLPMSEIDRMAKLQ 291
             + S Y    + R  D   V   + F    T  P +E     K  
Sbjct: 223 AAVRSMYTDQNHLRVEDPGQVEGNIVFTYLDTFHPDAEYVSQLKEH 268


>gi|160943537|ref|ZP_02090770.1| hypothetical protein FAEPRAM212_01028 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445216|gb|EDP22219.1| hypothetical protein FAEPRAM212_01028 [Faecalibacterium prausnitzii
           M21/2]
          Length = 366

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 64/233 (27%), Gaps = 28/233 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG   +   ++    ++         +      ++++
Sbjct: 24  PTGR-LHVGHYVGSLKERVRLQNTGEYDEIFIMIADAQAL---------TDNADNPEKVR 73

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G       +        L  + +        S    N  +  E 
Sbjct: 74  QNI---LQVALDYLACGLDPNKVHIFIQSMVPQLTELSFYYQNLVTVSRLQRNPTVKSEI 130

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGI 210
                +    + F  F Y I QA D                    Q        N + G 
Sbjct: 131 QMRNFEASIPVGF--FCYPISQAADITAFKATTVPAGEDQKPMIEQCCEIVHKFNSVYGE 188

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            L E        A    L       KM K+L   I+L++E        +    
Sbjct: 189 TLVEPEIVLPQNAACLRLPGIDGKAKMSKSLGNCIYLSEEPEDIEKKVKSMFT 241


>gi|257437732|ref|ZP_05613487.1| S4 domain protein [Faecalibacterium prausnitzii A2-165]
 gi|257200039|gb|EEU98323.1| S4 domain protein [Faecalibacterium prausnitzii A2-165]
          Length = 71

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKYAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|255514238|gb|EET90499.1| tryptophanyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 374

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 65/230 (28%), Gaps = 30/230 (13%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT-GHKPISLMGGGTSIIGDPS 85
           LD          Y G   +  S+  GHL   ++  WLQK  G +    +           
Sbjct: 64  LDEYEKGNRFYIYTGIAPSG-SMTVGHLIPFLMTLWLQKAFGAEVYIQIPD--------- 113

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFS----SFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
                 + +  ++    +E+I  +      + I  G       +  +  +          
Sbjct: 114 ----EEKFLAKKDPALTLERIHELAYDDALNIIALGFDPKKTKIFFDTEY--------AS 161

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM---G 198
                   V + ++F +V+  +      +  +  Y  +QA      +      +      
Sbjct: 162 VLYKQAVRVAKHITFSTVKDAMGFTNEDNIGKIFYTSMQAVPAFLKSVEEGHNVPCLIPL 221

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             DQ  +     D+  +L   K   L +  L    GT           + 
Sbjct: 222 AIDQDVHFRVARDVITKLGYYKPAILYAKFLPAFDGTSKASASDPTKTIY 271


>gi|255011750|ref|ZP_05283876.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis 3_1_12]
 gi|313149587|ref|ZP_07811780.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis 3_1_12]
 gi|313138354|gb|EFR55714.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis 3_1_12]
          Length = 363

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 70/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  +   ++++
Sbjct: 13  PTGK-LHIGHYVGSLKRRVELQNSGLFDKTFIFIADAQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPEKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMIEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L++E             
Sbjct: 176 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEEADEVQKKVMSMFT 230


>gi|29349272|ref|NP_812775.1| tryptophanyl-tRNA synthetase II [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253570382|ref|ZP_04847791.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 1_1_6]
 gi|298384811|ref|ZP_06994370.1| tryptophan--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|29341180|gb|AAO78969.1| tryptophanyl-tRNA synthetase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840763|gb|EES68845.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 1_1_6]
 gi|298261955|gb|EFI04820.1| tryptophan--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 366

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 72/238 (30%), Gaps = 39/238 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQDAGDYSKMFIFIADSQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G   + A +        LC + +  +     S    N  +  E 
Sbjct: 63  QNV---IEVALDYLACGIDPSKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSEI 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   +    ++  R   
Sbjct: 120 QMRNFEASIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMLEQAREIVRRFNY 173

Query: 219 PKLFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                L  P +             T    KM K+L   I+L++    P    +   ++
Sbjct: 174 IYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSE---EPEEIQKKIMSM 228


>gi|153809087|ref|ZP_01961755.1| hypothetical protein BACCAC_03395 [Bacteroides caccae ATCC 43185]
 gi|149128420|gb|EDM19639.1| hypothetical protein BACCAC_03395 [Bacteroides caccae ATCC 43185]
          Length = 364

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 72/238 (30%), Gaps = 39/238 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQDAGDYSKMFIFIADSQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G   + A +        LC + +  +     S    N  +  E 
Sbjct: 63  QNV---IEVALDYLACGIDPSKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSEI 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   +    ++  R   
Sbjct: 120 QMRNFEASIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMLEQAREIVRRFNY 173

Query: 219 PKLFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                L  P +             T    KM K+L   I+L++    P    +   ++
Sbjct: 174 IYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSE---EPEEIQKKIMSM 228


>gi|270011291|gb|EFA07739.1| hypothetical protein TcasGA2_TC002219 [Tribolium castaneum]
          Length = 148

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 12/145 (8%)

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G K GK+   A+WL+ E TSP+  +Q++    D +V    K  T  P+  I  + +   +
Sbjct: 2   GDKFGKSAGNAMWLSAEKTSPFTLYQFFVRQVDTEVEKMLKFFTFEPVGSIKDLMRRHTE 61

Query: 294 EI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISIS-------- 342
           +      +K +A ++  +VHG +  E A  A    ++ SI +   M  + I         
Sbjct: 62  KPELRLPQKYLAEQVVLLVHGEKGLEAAHKATKVLYERSITALAEMNPLEIKSLFEGATV 121

Query: 343 -KDEVSRGMGLLTLIVKAGFATSTN 366
            +     G  +L L + AG   +  
Sbjct: 122 VEILPEPGQSVLDLAMSAGCFLTKG 146


>gi|322717436|gb|EFZ09007.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 337

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVEHNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|256785682|ref|ZP_05524113.1| tryptophanyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 337

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 75/260 (28%), Gaps = 33/260 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   T+ S H G+    +     +Q T H    ++    + I  P    E
Sbjct: 1   MANERPRVLSGIQPTSGSFHLGNYLGAVRQWVDMQDT-HDAFYMVVDLHA-ITVPQDPKE 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A       WL +      +   G    
Sbjct: 59  LRENTRVAAAQLLAAGLDPDRCTLFVQSHVPEHA----QLGWLMN-----CITGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S  +     +   F Y +L   D + L +     +   G DQ  ++   
Sbjct: 110 MTQFKD----KSAKQGNDRTTVGLFTYPMLMVADIL-LYQADQVPV---GEDQRQHLELT 161

Query: 210 IDLGERLKTPKLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL +R       A T P   +   +           KM K+ +    L   +  P    
Sbjct: 162 RDLADRFNQTYGDAFTVPTAYILKETAKIYDLQDPTAKMSKSAATPKGLINLLDEPKATA 221

Query: 259 QYWRN--IDDADVVSFAKRL 276
           +  ++   D   VV F +  
Sbjct: 222 KKVKSAVTDTDTVVRFDRET 241


>gi|83772313|dbj|BAE62443.1| unnamed protein product [Aspergillus oryzae]
          Length = 439

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 79/262 (30%), Gaps = 40/262 (15%)

Query: 12  LSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQL-----MLLFWL 63
              RG +   S+      LD          Y G   ++ S+H GH         M    +
Sbjct: 81  FMRRGIV--FSHRELTTILDRYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKYMAARCM 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
            +T   P+  +   T +        +     +  ++++     K      I  G      
Sbjct: 139 FRT-FLPVVPLVMLTGL--------QKFMHSQKIDVEDAKRYTKANAMDIIAVGFDMKKT 189

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + ++  ++    Y ++         + + ++  S++       S +  EF++   Q+  
Sbjct: 190 FIFSDFDFVGGAFYENMC-------RMAKRITINSIKGTFGFNDSNNIGEFHFCATQSAS 242

Query: 184 FVELA--------KNYDCRLQM---GGSDQWGNIICGIDLGERLKTPK---LFALTSPLL 229
               +        +     +        DQ        +  E++K  K   + A+  P L
Sbjct: 243 AFATSFPHIFGTDRKKVSSIPCLIPCAIDQDPYFRQCRENAEKMKYKKPSLIHAIFLPAL 302

Query: 230 TTASGTKMGKTLSGAIWLNKEM 251
                       + AI++N   
Sbjct: 303 QGPGSKMSASVDTSAIFMNDTP 324


>gi|268567229|ref|XP_002647748.1| C. briggsae CBR-WRS-1 protein [Caenorhabditis briggsae]
          Length = 315

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  RG      +    LD          Y G   ++ SLH GHL   +   WLQ+
Sbjct: 72  MLRRGMFFAHRDFSAILDRKEQGKPFYLYTGRGASSGSLHLGHLVPFIFTKWLQE 126


>gi|302914834|ref|XP_003051228.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732166|gb|EEU45515.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 455

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 18/178 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + L           Y G   +  SLH GH   L    WLQ+    P+  
Sbjct: 70  RGLFFSHRDFDKILTKYEHGEPFFLYTGRGPSTGSLHLGHTIPLEFTRWLQEVFDVPLVF 129

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 ++ D    DE      +   +E +          I  G       + ++  +L 
Sbjct: 130 ------MLTD----DEKALFKDNLTFEETLAYGMENARDIIALGFDVKKTFVYSDLKYLS 179

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               ++           +++++F  VR      +S +  +  +  +Q       +   
Sbjct: 180 HHFLMNAWE-------FSKLVTFNQVRGAFGFNESTNIGKIFFPSVQCVAAFATSYPE 230


>gi|119871968|ref|YP_929975.1| tryptophanyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673376|gb|ABL87632.1| tryptophanyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 379

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           L +RGF +   +    L           Y G   +   +H GH+   +LL W   
Sbjct: 53  LIKRGFFYAHRDFDTILKWHGEGKPWALYTGRGPSGP-VHIGHMVPWILLKWFSD 106


>gi|21223215|ref|NP_628994.1| tryptophanyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289769575|ref|ZP_06528953.1| tryptophanyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|25009450|sp|Q9KZA7|SYW2_STRCO RecName: Full=Tryptophanyl-tRNA synthetase 2; AltName:
           Full=Tryptophan--tRNA ligase 2; Short=TrpRS 2
 gi|7649569|emb|CAB89058.1| tryptophanyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289699774|gb|EFD67203.1| tryptophanyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 339

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 75/260 (28%), Gaps = 33/260 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   T+ S H G+    +     +Q T H    ++    + I  P    E
Sbjct: 3   MANERPRVLSGIQPTSGSFHLGNYLGAVRQWVDMQDT-HDAFYMVVDLHA-ITVPQDPKE 60

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A       WL +      +   G    
Sbjct: 61  LRENTRVAAAQLLAAGLDPDRCTLFVQSHVPEHA----QLGWLMN-----CITGFGEASR 111

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S  +     +   F Y +L   D + L +     +   G DQ  ++   
Sbjct: 112 MTQFKD----KSAKQGNDRTTVGLFTYPMLMVADIL-LYQADQVPV---GEDQRQHLELT 163

Query: 210 IDLGERLKTPKLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL +R       A T P   +   +           KM K+ +    L   +  P    
Sbjct: 164 RDLADRFNQTYGDAFTVPTAYILKETAKIYDLQDPTAKMSKSAATPKGLINLLDEPKATA 223

Query: 259 QYWRN--IDDADVVSFAKRL 276
           +  ++   D   VV F +  
Sbjct: 224 KKVKSAVTDTDTVVRFDRET 243


>gi|258593579|emb|CBE69920.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS)
           [NC10 bacterium 'Dutch sediment']
          Length = 328

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 82/232 (35%), Gaps = 32/232 (13%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   +     LQ+  ++    +    ++         +     ++ I
Sbjct: 9   GMRPTGR-LHLGHLFGALDNWRRLQEA-YECFFFVADWHAL---------TTEYADTKSI 57

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++NI ++       +  G   + A +          +   LL  I     + R  +++  
Sbjct: 58  RDNICEM---ALDMLAAGIDPSKATLFLQSRLHEHAELYLLLSMITPVPWLERNPTYKE- 113

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + +    + LS   F  Y +L A D + + K     +   G DQ  ++    ++  R   
Sbjct: 114 QQQELTTKDLSTHGFLGYPVLMASDIL-IYKANHVPV---GIDQVPHLELAREIARRFNA 169

Query: 218 -TPKLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
              ++     PLLT         G KM K+   A++L+    SP       +
Sbjct: 170 LYGEVLVEPQPLLTEFAKVPGTDGRKMSKSYGNAVFLS---DSPEQVAAKIK 218


>gi|160944264|ref|ZP_02091493.1| hypothetical protein FAEPRAM212_01773 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444446|gb|EDP21450.1| hypothetical protein FAEPRAM212_01773 [Faecalibacterium prausnitzii
           M21/2]
          Length = 71

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKFAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|331220018|ref|XP_003322685.1| tryptophanyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301675|gb|EFP78266.1| tryptophanyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 532

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRELDIL-CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           L +RG      +   +  L         Y G   +  S+H GH+   ++  WLQ+
Sbjct: 203 LLKRGMFFSHRDLDVILNLYEQGKPFYLYTGRGPSTGSMHLGHMVPFIVTQWLQE 257


>gi|119386847|ref|YP_917902.1| RNA-binding S4 domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119377442|gb|ABL72206.1| RNA-binding S4 domain protein [Paracoccus denitrificans PD1222]
          Length = 457

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +  ++ +AG   S  EA R +    + +N   I +  L +   D  
Sbjct: 17  IAKVMARAG-VASRREAERMILEGRVTVNGKKIDSPALDVTPADRI 61


>gi|313112550|ref|ZP_07798214.1| S4 domain protein [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310625132|gb|EFQ08423.1| S4 domain protein [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 71

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKYAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|40889610|pdb|1R6T|A Chain A, Crystal Structure Of Human Tryptophanyl-Trna Synthetase
 gi|40889611|pdb|1R6T|B Chain B, Crystal Structure Of Human Tryptophanyl-Trna Synthetase
          Length = 477

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 79/251 (31%), Gaps = 31/251 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + LD   ++     Y G   ++ + H GHL   +   WLQ   + P
Sbjct: 131 FLRRGIFFSHRDXNQVLDAYENKKPFYLYTGRGPSSEAXHVGHLIPFIFTKWLQDVFNVP 190

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   + +            I  G       + ++  
Sbjct: 191 LVI-----------QXTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLD 239

Query: 131 WL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDF 184
           +   S  +   + +I    + N+      V+       S    + ++  +Q     +  F
Sbjct: 240 YXGXSSGFYKNVVKIQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSF 293

Query: 185 VELAKNYDCRLQM---GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMG 238
            ++ ++    +Q       DQ        D+  R+  PK     +   P L  A      
Sbjct: 294 PQIFRDR-TDIQCLIPCAIDQDPYFRXTRDVAPRIGYPKPALLHSTFFPALQGAQTKXSA 352

Query: 239 KTLSGAIWLNK 249
              + +I+L  
Sbjct: 353 SDPNSSIFLTD 363


>gi|112490030|pdb|2AZX|A Chain A, Charged And Uncharged Trnas Adopt Distinct Conformations
           When Complexed With Human Tryptophanyl-Trna Synthetase
 gi|112490031|pdb|2AZX|B Chain B, Charged And Uncharged Trnas Adopt Distinct Conformations
           When Complexed With Human Tryptophanyl-Trna Synthetase
          Length = 477

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 79/251 (31%), Gaps = 31/251 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + LD   ++     Y G   ++ + H GHL   +   WLQ   + P
Sbjct: 131 FLRRGIFFSHRDXNQVLDAYENKKPFYLYTGRGPSSEAXHVGHLIPFIFTKWLQDVFNVP 190

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   + +            I  G       + ++  
Sbjct: 191 LVI-----------QXTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLD 239

Query: 131 WL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDF 184
           +   S  +   + +I    + N+      V+       S    + ++  +Q     +  F
Sbjct: 240 YXGXSSGFYKNVVKIQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSF 293

Query: 185 VELAKNYDCRLQM---GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMG 238
            ++ ++    +Q       DQ        D+  R+  PK     +   P L  A      
Sbjct: 294 PQIFRDR-TDIQCLIPCAIDQDPYFRXTRDVAPRIGYPKPALLHSTFFPALQGAQTKXSA 352

Query: 239 KTLSGAIWLNK 249
              + +I+L  
Sbjct: 353 SDPNSSIFLTD 363


>gi|40889612|pdb|1R6U|A Chain A, Crystal Structure Of An Active Fragment Of Human
           Tryptophanyl-Trna Synthetase With Cytokine Activity
 gi|40889613|pdb|1R6U|B Chain B, Crystal Structure Of An Active Fragment Of Human
           Tryptophanyl-Trna Synthetase With Cytokine Activity
          Length = 437

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 79/251 (31%), Gaps = 31/251 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +  + LD   ++     Y G   ++ + H GHL   +   WLQ   + P
Sbjct: 84  FLRRGIFFSHRDXNQVLDAYENKKPFYLYTGRGPSSEAXHVGHLIPFIFTKWLQDVFNVP 143

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   + +            I  G       + ++  
Sbjct: 144 LVI-----------QXTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLD 192

Query: 131 WL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDF 184
           +   S  +   + +I    + N+      V+       S    + ++  +Q     +  F
Sbjct: 193 YXGXSSGFYKNVVKIQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSF 246

Query: 185 VELAKNYDCRLQM---GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMG 238
            ++ ++    +Q       DQ        D+  R+  PK     +   P L  A      
Sbjct: 247 PQIFRDR-TDIQCLIPCAIDQDPYFRXTRDVAPRIGYPKPALLHSTFFPALQGAQTKXSA 305

Query: 239 KTLSGAIWLNK 249
              + +I+L  
Sbjct: 306 SDPNSSIFLTD 316


>gi|224372207|ref|YP_002606579.1| tryptophanyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588533|gb|ACM92269.1| tryptophanyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 323

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 104/349 (29%), Gaps = 49/349 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T  +LH GH    L     LQ+  +     +    ++              +  E 
Sbjct: 6   GMRPTG-NLHLGHYIGVLRNWLELQEK-YDTFFFVADWHAL------------STKYDEG 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +  E    +   +I  G     + +          +   +L  I     + R  +++  
Sbjct: 52  LDLKELSIELVKEWIACGIDPEKSTIFVQSDIKEHAELYLVLNMITPVSWLERNPTYKDA 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
            ++++ +   +     Y +LQ  D +     YD  L   G DQ  ++    ++  R    
Sbjct: 112 MAQVEYKDKNNAGFLTYPVLQTADII----LYDANLVPIGEDQKPHLEIAREIVRRFHYL 167

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                    PK      P L    G KM K+ + AI+L++           W  +  A  
Sbjct: 168 FKKEDVFVEPKELLTEMPRLPGLDGRKMSKSFNNAIYLDETSEDI------WAKVRQAKT 221

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                + T     E+  + +        + + +         G     +         + 
Sbjct: 222 DPARIKKTDPGHPEVCIVFEYHKAFS--SAEEVKEIENACRAGSIGCVECKKRCAANIEN 279

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIV----KAGFATSTN--EARRHL 372
            +        S++ DE      +L +I     KA    S    E  + +
Sbjct: 280 IVAPIREKKASLNDDE------ILDIIKTGERKAKELASKKMEEVNKLI 322


>gi|85705167|ref|ZP_01036267.1| RNA pseudouridylate synthase family protein [Roseovarius sp. 217]
 gi|85670489|gb|EAQ25350.1| RNA pseudouridylate synthase family protein [Roseovarius sp. 217]
          Length = 269

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  +I +AG A S  EA R +++  + +N   +    L +   D
Sbjct: 12  PEGERIAKVIARAGIA-SRREAERLIEAGRVTVNGQKVLRAALNVTPAD 59


>gi|309356319|emb|CAP37361.2| CBR-WARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 319

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  RG      +    LD          Y G   ++ SLH GHL   +   WLQ+
Sbjct: 72  MLRRGMFFAHRDFSAILDRKEQGKPFYLYTGRGASSGSLHLGHLVPFIFTKWLQE 126


>gi|237714330|ref|ZP_04544811.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. D1]
 gi|262408163|ref|ZP_06084710.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294645111|ref|ZP_06722836.1| tryptophan--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294809737|ref|ZP_06768424.1| tryptophan--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229445494|gb|EEO51285.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. D1]
 gi|262353715|gb|EEZ02808.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292639535|gb|EFF57828.1| tryptophan--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294443071|gb|EFG11851.1| tryptophan--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295088076|emb|CBK69599.1| tryptophanyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 364

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 72/238 (30%), Gaps = 39/238 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQNAGDYSKMFIFIADSQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G   T A +        LC + +  +     S    N  +  E 
Sbjct: 63  QNV---IEVALDYLACGIDPTKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSEI 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   +    ++  R   
Sbjct: 120 QMRNFEASIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMLEQAREIVRRFNY 173

Query: 219 PKLFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                L  P +             T    KM K+L   I+L++    P    +   ++
Sbjct: 174 IYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSE---EPEEIQKKIMSM 228


>gi|298480183|ref|ZP_06998381.1| tryptophan--tRNA ligase [Bacteroides sp. D22]
 gi|298273464|gb|EFI15027.1| tryptophan--tRNA ligase [Bacteroides sp. D22]
          Length = 364

 Score = 46.3 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 72/238 (30%), Gaps = 39/238 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQNAGDYSKMFIFIADSQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G   T A +        LC + +  +     S    N  +  E 
Sbjct: 63  QNV---IEVALDYLACGIDPTKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSEI 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   +    ++  R   
Sbjct: 120 QMRNFEASIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMLEQAREIVRRFNY 173

Query: 219 PKLFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                L  P +             T    KM K+L   I+L++    P    +   ++
Sbjct: 174 IYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSE---EPEEIQKKIMSM 228


>gi|292657059|ref|YP_003536956.1| tryptophanyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372325|gb|ADE04552.1| tryptophanyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 529

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 88/340 (25%), Gaps = 25/340 (7%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R  LD + +        G+  T    H GH      + W Q+ G   
Sbjct: 61  LMRRGVIFGHRDYRPVLDAMRNGDDFAVLSGFMPTGDP-HIGHKLVFDEIIWHQEQG--- 116

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
               G    +I D           R     E  E  +    S I  G    +  +     
Sbjct: 117 ----GDAYGLIAD-----MEAHSARGIPWDEINEHSRDYLLSLIALGFDPEEGELYRQSD 167

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-LAK 189
              + +   L  E+G   + +        +S    +   +      ++ Q  D +     
Sbjct: 168 ---NDRLQRLAFELGGKANFSE------FQSIYGFDGETNVSHMQSVVTQMADILYPQLD 218

Query: 190 NYDCRLQMGGSDQWGNIICGIDL-GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +    +   G DQ  ++    DL           A  S  L  A    +           
Sbjct: 219 DPKPTVIPVGPDQDPHVRFARDLAIRMRFFKVTEAFASFELDDAERPLVAAAHDAREAYA 278

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           ++   P          D     +      ++  S ++++     + +    +  A + T 
Sbjct: 279 EDADMPRCGEAAEWLADADLDAAGVLVSESVRESAVEKLENAGMEPLRPRIRFFARQATD 338

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
                   +           +      +        EV  
Sbjct: 339 EAFEALIEDIEGEKRRYDQHIDAFDMDVDEAEDLAREVEA 378


>gi|227541838|ref|ZP_03971887.1| tryptophanyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182281|gb|EEI63253.1| tryptophanyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 337

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 62/199 (31%), Gaps = 22/199 (11%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ    +    +    +I  D      
Sbjct: 1   MTDKKTRVLSGIQPTADSYHLGNYLGALKQWITLQDE-FEAFYFIPNLHAITVD------ 53

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                  +E++             +  G     + +          +   ++  +  F  
Sbjct: 54  ----QDPEELRNRTYAGAAQL---LALGIDPEKSTLFVQSHVHEHAELAWVMTCLTGFGE 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S+ +     S   F Y +L A D + L K     +   G DQ  ++   
Sbjct: 107 ASRMTQFKD-KSKKRGADRTSAGLFTYPMLMAADIL-LYKPKYVPV---GEDQRQHLELS 161

Query: 210 IDLGERLKTPKLFALTSPL 228
             L +R    K F  T PL
Sbjct: 162 RTLADRFN--KRFGDTFPL 178


>gi|227486999|ref|ZP_03917315.1| tryptophanyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227093073|gb|EEI28385.1| tryptophanyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 337

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 62/199 (31%), Gaps = 22/199 (11%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ    +    +    +I  D      
Sbjct: 1   MTDKKTRVLSGIQPTADSYHLGNYLGALKQWITLQDE-FEAFYFIPNLHAITVD------ 53

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                  +E++             +  G     + +          +   ++  +  F  
Sbjct: 54  ----QDPEELRNRTYAGAAQL---LALGIDPEKSTLFVQSHVHEHAELAWVMTCLTGFGE 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S+ +     S   F Y +L A D + L K     +   G DQ  ++   
Sbjct: 107 ASRMTQFKD-KSKKRGADRTSAGLFTYPMLMAADIL-LYKPKYVPV---GEDQRQHLELS 161

Query: 210 IDLGERLKTPKLFALTSPL 228
             L +R    K F  T PL
Sbjct: 162 RTLADRFN--KRFGDTFPL 178


>gi|260790589|ref|XP_002590324.1| hypothetical protein BRAFLDRAFT_121376 [Branchiostoma floridae]
 gi|229275516|gb|EEN46335.1| hypothetical protein BRAFLDRAFT_121376 [Branchiostoma floridae]
          Length = 133

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 2/70 (2%)

Query: 12 LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
          L  R    ++    +L  +  +  V  Y G   T    H  +   +  +    K G +  
Sbjct: 14 LITRNL-QEVLQEEKLKEVLKERDVKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 71

Query: 72 SLMGGGTSII 81
           L     + +
Sbjct: 72 ILFADLHAYL 81


>gi|319795297|ref|YP_004156937.1| tryptophanyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597760|gb|ADU38826.1| tryptophanyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 443

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 72/258 (27%), Gaps = 36/258 (13%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSF 86
            L S   +    G   + +  H G+    +   +      G +    +    ++I     
Sbjct: 2   ALSSSAPLRVLTGITPSGTP-HLGNYVGSIRHSVRQSVAPGVESFFFLADYHALI----- 55

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                ++     IQ        I +S++  G                  +    L  +  
Sbjct: 56  -----KVQDPAVIQR---STLEIAASWLACGLDPERVTFYRQSDIAAIPELTWFLTCVTG 107

Query: 147 FFSVNRMLSFE-----SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
              +NR  +++     ++      +  ++   F Y +L   D +      +      G D
Sbjct: 108 KGVLNRAHAYKAQLDKNIAKGEDPDADVTAGLFMYPVLMGADILMF----NAHKVPVGRD 163

Query: 202 QWGNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMT 252
           Q  +I    D+ +R         T P          L    G KM K+    I L     
Sbjct: 164 QVQHIEMARDMAQRFNHQYGEHFTLPEAEIDDAVATLPGLDGRKMSKSYGNTIPLFASR- 222

Query: 253 SPYNFWQYWRNIDDADVV 270
             Y   Q    + D+   
Sbjct: 223 -AYLQKQIASIVTDSRAP 239


>gi|46137247|ref|XP_390315.1| hypothetical protein FG10139.1 [Gibberella zeae PH-1]
          Length = 451

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 55/178 (30%), Gaps = 18/178 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + L           Y G   +  SLH GH   L    WLQ     P+  
Sbjct: 70  RGLFFSHRDFDKILTKYEHGEPFFLYTGRGPSTGSLHLGHTIPLEFTKWLQDVFDVPLVF 129

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 ++ D    DE      +   +E ++         I  G  +    + ++  +L 
Sbjct: 130 ------MLTD----DEKALFKDNLTFEETLKYAMENARDIIALGFDQKKTFLYSDLQYLS 179

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               ++           +++++F  VR      +S +  +  +  +Q       +   
Sbjct: 180 GHFLMNAWE-------FSKLVTFNQVRGAFGFNESSNIGKIFFPSVQCVAAFATSYPE 230


>gi|333029320|ref|ZP_08457381.1| pseudouridine synthase Rsu [Bacteroides coprosuis DSM 18011]
 gi|332739917|gb|EGJ70399.1| pseudouridine synthase Rsu [Bacteroides coprosuis DSM 18011]
          Length = 437

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   +++ A+ +N  I+     ++K  D        +
Sbjct: 197 DPNEPIRLNKYLANAGVC-SRREADEFIETGAVTVNGEIVKELGTKVKRSDEVKFNGELV 255

Query: 405 SFGKKNHIICH 415
           S  KK +++ +
Sbjct: 256 SIEKKVYVLLN 266


>gi|295103716|emb|CBL01260.1| Uncharacterized conserved protein [Faecalibacterium prausnitzii
           SL3/3]
          Length = 71

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKFAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|294892620|ref|XP_002774150.1| tyrosyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239879367|gb|EER05966.1| tyrosyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 435

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/366 (11%), Positives = 93/366 (25%), Gaps = 66/366 (18%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMGG 76
           +I    E+  L         Y G++ +   +H   G L  + +   L   G   +  +  
Sbjct: 94  EIIQEEEVRKLFEAKANPICYDGFEPSGR-MHIAQGILKAINV-NRLTSAGCVFVFWVAD 151

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
              ++ +    D        +  Q  +E  K         G    +   L     +    
Sbjct: 152 WFGLLNNKMGGDLE---KIKKVGQYFVEVWKA-------AGMDMDNVRFLRASEEINKNP 201

Query: 137 YIDL--LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
                 +  I    S++R+     +  R + ++  S  +  Y  +Q  D   L       
Sbjct: 202 QDYWLRVMNIARANSISRVKRCGQIMGRSEGDEQPSA-QILYPCMQCSDIFYLH----AD 256

Query: 195 LQMGGSDQWGNIICGIDL----------GERLKTPKLFA--LTSPLLTTASGTKMGKTLS 242
           +   G DQ    +   +                   +       P L      KM K+  
Sbjct: 257 ICQLGMDQRKVNMLAREYMDKPEASKDKQRMQGRKPIIVSHAMVPGLL-EGQEKMSKSNP 315

Query: 243 GAIWLNKEM-----------TSPYNFWQYWRNIDDADVVSFAK--------------RLT 277
            +    ++              P N  +    +    ++ F                 +T
Sbjct: 316 DSAIFMEDSEADVKRKIKKAFCPPNVVEGNPCVTYVKMLVFPYLGKFEVQRKEANGGDVT 375

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              + E +           + K  +   +  M+      E          +       + 
Sbjct: 376 FRTVEEFEHAYAHGELHPGDLKAALTRCLNQMI------EPVRHHFETNPEAKALLAEIK 429

Query: 338 TISISK 343
           +  ++K
Sbjct: 430 SYKVTK 435


>gi|14589325|emb|CAC43232.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis]
          Length = 354

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 2/86 (2%)

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--M 287
           T +       T  G +WL++EMTSPY ++QY+ N  DADV+ + +  T L   E+     
Sbjct: 146 TDSRQKFGKSTGGGNLWLDREMTSPYAWYQYFVNSPDADVLGYLRWFTFLTPDELAELAD 205

Query: 288 AKLQGKEINEAKKIIATEITTMVHGR 313
           A         A++ +A E+TT+VHG 
Sbjct: 206 ATENRPHERAAQRRLARELTTLVHGE 231


>gi|313674772|ref|YP_004052768.1| tryptophanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941470|gb|ADR20660.1| tryptophanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 322

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/329 (11%), Positives = 85/329 (25%), Gaps = 48/329 (14%)

Query: 50  HAGHL----TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES-RRMMRSQEIQENIE 104
           H G+L       + L   Q   ++    +    S+    + +D   R+   +      + 
Sbjct: 15  HLGNLLGAIIPAIKLS--QDPKNESFFFIADLHSL---TTIKDAEVRKDNVNAVAAAWLA 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
                F +       ++    +    W            +  +     + +  S + +  
Sbjct: 70  FG---FDTDKNLFYRQSKVPQVTELNWY-----------MSCYTPFPMLANAHSFKDKSD 115

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL 224
           R   ++   F Y +L A D +     YD  +   G DQ  ++    D+            
Sbjct: 116 RLADVNAGLFTYPVLMACDII----LYDADIVPVGKDQKQHLEMTRDIASAFNHRYGDVF 171

Query: 225 TSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS---- 271
             P          +    G KM K+    I + +                          
Sbjct: 172 VLPEARIDEQIMTIPGTDGQKMSKSYGNTIDIFQTDKKLRKNVMQIITDSTPMEEPKNPD 231

Query: 272 -------FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
                  +    +   ++E+ R  +        AK+ +   I        E        +
Sbjct: 232 KCNVFNIYKLLASDEQIAEMRRNYEGGNYGYGHAKQALFELIVEKYAKERELYNHYMENL 291

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           +     +         I+   + R   +L
Sbjct: 292 DELHKKLEKGEAKASEIASKTLGRVRKVL 320


>gi|295101862|emb|CBK99407.1| Uncharacterized conserved protein [Faecalibacterium prausnitzii
           L2-6]
          Length = 71

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKYAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|145593355|ref|YP_001157652.1| tryptophanyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145302692|gb|ABP53274.1| tryptophanyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 353

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 73/251 (29%), Gaps = 24/251 (9%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               + G   TA S H G+      +     LQ+T H     +    +            
Sbjct: 19  QPRVFSGIQPTADSFHLGNYLG--AVRHWVALQET-HDAFYCVVDLHA------------ 63

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            +    + +   ++ +   +  +  G       +          +   +L  +  F    
Sbjct: 64  -ITAGHDPRVLAQRSRVAAAQLLAAGLDPERCTLFVQSQVPEHAQLAWVLGCLTGFGEAG 122

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S+ +  +  S   F Y ILQA D + L +     +   G DQ  ++    D
Sbjct: 123 RMTQFKD-KSQKQGNERASVGLFTYPILQAADIL-LYQADAVPV---GEDQRQHLELSRD 177

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           L +R  T      T P       T     L        + +S       +       V  
Sbjct: 178 LAQRFNTRFGSTFTVPAAHIVKDTAKITDLQDPTAKMSKSSSSPAGIVLFLEDAARSVKK 237

Query: 272 FAKRLTTLPMS 282
               +T     
Sbjct: 238 IRSAVTDTGRE 248


>gi|288556774|ref|YP_003428709.1| tryptophanyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288547934|gb|ADC51817.1| tryptophanyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 332

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 90/327 (27%), Gaps = 24/327 (7%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              T   G   T   LH G+    M  +  LQK  ++    +    ++            
Sbjct: 3   QKQTLVSGIRPTGD-LHLGNYIGAMKDIHRLQKE-YEAYFFIVDLHAL------------ 48

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
                + +    + +    S++  G     A +    +    I  + L   +     +  
Sbjct: 49  -TTHPKPELIKPRTRDAVRSYLGAGLDPNQATIYAQSSLAAEISELHLYLSMVMH--IGE 105

Query: 153 MLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +L   + + + K+    +S+    Y +L A D       +       G+DQ  +I    D
Sbjct: 106 LLRCPTFKEKAKQHADHVSYGLVGYPVLMAADMF----IHGAHKVPVGADQLVHIEIARD 161

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           +  +  +     LT P        ++                 Y   Q  +   +  V  
Sbjct: 162 IARKFNSMYGEILTLPNGMVEKEARVPSLGGKGKMSKSLGAKTYISLQDSKETIENKVKR 221

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
                T   +S+      + G  +       + E       +  ++           +S 
Sbjct: 222 AYSDPTRTHLSDPGHPT-VDGCNVYHLHSYFSNEEVRKDIEKRCSDANIGCVRCKQMLSE 280

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVK 358
               +      +      + +  ++ +
Sbjct: 281 SIIELTEPMQKRALAYSDIDVDDILRE 307


>gi|220911967|ref|YP_002487276.1| tryptophanyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219858845|gb|ACL39187.1| tryptophanyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 347

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 20/194 (10%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                 G   TA SLH G+    +     +Q   +  +  +    +I  D          
Sbjct: 10  KKRILSGAKPTADSLHLGNYIGAVRNWVDMQ-AEYDAVFFIPDLHAITVD---------- 58

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
               +  E  ++ + + + +I  G     ++           +    L  I  F   +RM
Sbjct: 59  ---FDPAELAKRTRIVAAQYIAAGIDPDKSIFFVQSHVPEHAQLAWALNCITGFGEASRM 115

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+  +++     + +   F Y  L A D +     Y   L   G DQ  ++    +L 
Sbjct: 116 TQFKD-KTQKSGADTATLGLFAYPTLMAADIL----LYQTDLVPVGEDQRQHLELTRNLA 170

Query: 214 ERLKTPKLFALTSP 227
           +R  T      T P
Sbjct: 171 QRFNTKFGATFTVP 184


>gi|294887287|ref|XP_002772034.1| tyrosyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239875972|gb|EER03850.1| tyrosyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 435

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 42/366 (11%), Positives = 93/366 (25%), Gaps = 66/366 (18%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMGG 76
           +I    E+  L         Y G++ +   +H   G L  + +   L   G   +  +  
Sbjct: 94  EIIQEEEVRKLFEAKANPICYDGFEPSGR-MHIAQGILKAINV-NRLTSAGCVFVFWVAD 151

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
              ++ +    D        +  Q  +E  K         G    +   L     +    
Sbjct: 152 WFGLLNNKMGGDLE---KIKKVGQYFVEVWKA-------AGMDMDNVRFLRASEEINKNP 201

Query: 137 YIDL--LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
                 +  I    S++R+     +  R + ++  S  +  Y  +Q  D   L       
Sbjct: 202 QDYWLRVMNIARANSISRVKRCGQIMGRSEGDEQPSA-QILYPCMQCSDIFYLH----AD 256

Query: 195 LQMGGSDQWGNIICGIDL----------GERLKTPKLFA--LTSPLLTTASGTKMGKTLS 242
           +   G DQ    +   +                   +       P L      KM K+  
Sbjct: 257 ICQLGMDQRKVNMLAREYMDKPEASKDKQRMQGRKPIIVSHAMVPGLL-EGQEKMSKSNP 315

Query: 243 GAIWLNKEM-----------TSPYNFWQYWRNIDDADVVSFAK--------------RLT 277
            +    ++              P N  +    +    ++ F                 +T
Sbjct: 316 DSAIFMEDSEADVKRKIKKAFCPPNVVEGNPCVTYVKMLVFPYLGKFEVQRKEANGGDVT 375

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              + E +           + K  +   +  M+      E          +       + 
Sbjct: 376 FKTVEEFEHAYAHGELHPGDLKAALTRCLNQMI------EPVRHHFETNPEAKALLAEIK 429

Query: 338 TISISK 343
           +  ++K
Sbjct: 430 SYKVTK 435


>gi|254293362|ref|YP_003059385.1| RNA-binding S4 domain protein [Hirschia baltica ATCC 49814]
 gi|254041893|gb|ACT58688.1| RNA-binding S4 domain protein [Hirschia baltica ATCC 49814]
          Length = 508

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             S+   + S+G  +   +  AG   S  EA R ++   + +N  ++ +   ++   +  
Sbjct: 22  EKSVQSPDWSKGERIAKWLAAAGVC-SRREAERLIEEGLVAVNGQVLDSAAFKVTGNEKI 80


>gi|221091188|ref|XP_002154182.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase, cytoplasmic
           (Tryptophan--tRNA ligase) (TrpRS) [Hydra magnipapillata]
          Length = 433

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 74/250 (29%), Gaps = 28/250 (11%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L           Y G   ++ ++H GHL   +   ++Q   + P
Sbjct: 93  FLRRGIFFSQRDLDFILSKAEKHEPFYLYTGRGPSSEAMHLGHLIPFIFTKYIQDAFNVP 152

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE         ++E            I  G  K +  + +N  
Sbjct: 153 LII------QLTD----DEKFLWKEELTLEEANRLSYENAKDIIACGFDKKNTFIFSNMD 202

Query: 131 WL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-------AY 182
           +L  S ++   +  I    + N+      V+            + ++  +Q        +
Sbjct: 203 YLGQSTEFYRTILRIQKCVTFNQ------VKGIFGFGDGDKIGKISFPAIQAAPSFSSTF 256

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGK 239
             +   K+    L     DQ        D+  RL   K     +   P L  A       
Sbjct: 257 PQIFNGKSNIPCLIPCAIDQDPYFRMTRDVAPRLNYLKPALLHSTFFPALQGAKTKMSSS 316

Query: 240 TLSGAIWLNK 249
             + +I+L  
Sbjct: 317 DPNSSIFLTD 326


>gi|99081768|ref|YP_613922.1| pseudouridine synthase, Rsu [Ruegeria sp. TM1040]
 gi|99038048|gb|ABF64660.1| Pseudouridine synthase Rsu [Ruegeria sp. TM1040]
          Length = 422

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG   S  EA R +    + +N  +I +  L +   D  
Sbjct: 59  QDGDRIAKVLSRAG-VASRREAERMIAEGRVAVNGKVIDSPALNVTNLDRI 108


>gi|67624621|ref|XP_668593.1| IFP53 [Cryptosporidium hominis TU502]
 gi|54659813|gb|EAL38376.1| IFP53 [Cryptosporidium hominis]
          Length = 593

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 86/268 (32%), Gaps = 36/268 (13%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F+ +    LS R F       + LD+     +   Y G   ++ SLH GHL   +   +L
Sbjct: 251 FRRNIF--LSHRDF------EKILDVYEKGELFYLYTGRGPSSESLHVGHLVPFLFTKYL 302

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q T   P+ +       + D    DE      +  ++E            I  G      
Sbjct: 303 QDTFKVPLVI------QLTD----DEKFIFKSNLTLEETHNYAYENMKDIIACGFDPELT 352

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  ++  +              + + +S   ++S    + S +  +F +  +QA  
Sbjct: 353 FIFTNLEYIGELYP--------DILRIEKKISCSQIKSIFGFKDSCNVGKFAFPAVQAAP 404

Query: 184 FVELA-------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
               +       +     L     DQ        D+  RL   K   + ++  P L  + 
Sbjct: 405 AFSSSFPHIFGGRTDVHCLVPHAIDQDPYFRMVRDVAPRLGYLKPSSIHSIFLPSLQGSQ 464

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
                   + +I++N    S  N    +
Sbjct: 465 TKMSASVQNSSIFVNDNEESIRNKIMKY 492


>gi|226290430|gb|EEH45914.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 512

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 44/116 (37%), Gaps = 2/116 (1%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  ++  +      AE A   +         +   P + 
Sbjct: 58  HGEQVRESQWEKMFCRRLRSVVPMDVNYLARNDGSAESAGRGSGIEGAGPRKAPLTPYMQ 117

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +      +   D 
Sbjct: 118 MAFAPLERRLDV--AIFRAMFASSTRQARQFVLHGSVTVNGKKMKYPGYLLNPGDL 171


>gi|225682980|gb|EEH21264.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 513

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 44/116 (37%), Gaps = 2/116 (1%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  ++  +      AE A   +         +   P + 
Sbjct: 58  HGEQVRESQWEKMFCRRLRSVVPMDVNYLARNDGSAESAGRGSGIEGAGPRKAPLTPYMQ 117

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +      +   D 
Sbjct: 118 MAFAPLERRLDV--AIFRAMFASSTRQARQFVLHGSVTVNGKKMKYPGYLLNPGDL 171


>gi|163737477|ref|ZP_02144894.1| Pseudouridine synthase, Rsu [Phaeobacter gallaeciensis BS107]
 gi|161389003|gb|EDQ13355.1| Pseudouridine synthase, Rsu [Phaeobacter gallaeciensis BS107]
          Length = 447

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           P  + +  +   G  +  ++ +AG   S  EA R +    + +N  +I +  L +
Sbjct: 39  PADTPATGDGPEGDRIAKVLSRAG-VASRREAERMIAEGRVAVNGKVIDSPALNV 92


>gi|258404893|ref|YP_003197635.1| tryptophanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797120|gb|ACV68057.1| tryptophanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 330

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 73/225 (32%), Gaps = 33/225 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII---GDPSFRDESRRMMRS 96
           G   T   LH GH    L     LQ+  +     +    ++     DP+      +    
Sbjct: 10  GMRPTGP-LHLGHYFGVLQNWTQLQEE-YDCYFFIADWHALTSEYNDPTHI----KSFVP 63

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           Q + + +             G   +   +          +   LL  I     + R  ++
Sbjct: 64  QLVMDWVAG-----------GLDPSKCTLFLQSHIKAHSELHLLLSMITPLGWLERNPTY 112

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           + ++  L  +   ++    Y +L + D + + +     +   G DQ  ++    ++  R 
Sbjct: 113 KEIKQELAAKDLNTYGFLGYPVLMSSDIL-MYRPELVPV---GHDQLPHLELCREIARRF 168

Query: 217 KT-------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                         LT +  L    G KM K+   AI L ++M +
Sbjct: 169 NHLYGDFFPEPQAKLTETAKLPGLDGRKMSKSYGNAIHLGEDMET 213


>gi|183981210|ref|YP_001849501.1| tryptophanyl-tRNA synthetase TrpS [Mycobacterium marinum M]
 gi|183174536|gb|ACC39646.1| tryptophanyl-tRNA synthetase TrpS [Mycobacterium marinum M]
          Length = 339

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 72/253 (28%), Gaps = 26/253 (10%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTS--IIGDPSFRDE 89
           G    + G   T+ SLH G+    +   W  LQ   H     +    +  +  DP     
Sbjct: 6   GSRRIFSGVQPTSDSLHLGNALGAVT-QWVALQD-DHDAFFCVVDLHAITLPQDP----- 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
               +R + +    + +             ++     +   W        +L     F  
Sbjct: 59  --EALRRRTLVTAAQYLALGIDPARATIFVQSHVPAHSQLAW--------VLGCFTGFGQ 108

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S  +   S +   F Y +LQA D +     YD  L   G DQ  ++   
Sbjct: 109 ASRMTQFKD-KSTRQGADSATVGLFTYPVLQAADVLA----YDAELVPVGEDQRQHLELA 163

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            D+ +R           P +     T     L        +  S         +      
Sbjct: 164 RDIAQRFNGRFPDTFVVPDVLIPKITAKIYDLQDPTSKMSKSASTDAGLISLLDAPAVSA 223

Query: 270 VSFAKRLTTLPMS 282
                 +T     
Sbjct: 224 KKIRSAVTDSERE 236


>gi|118617112|ref|YP_905444.1| tryptophanyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569222|gb|ABL03973.1| tryptophanyl-tRNA synthetase TrpS [Mycobacterium ulcerans Agy99]
          Length = 339

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 72/253 (28%), Gaps = 26/253 (10%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTS--IIGDPSFRDE 89
           G    + G   T+ SLH G+    +   W  LQ   H     +    +  +  DP     
Sbjct: 6   GSRRIFSGVQPTSDSLHLGNALGAVT-QWVALQD-DHDAFFCVVDLHAITLPQDP----- 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
               +R + +    + +             ++     +   W        +L     F  
Sbjct: 59  --EALRRRTLVTAAQYLALGIDPARATIFVQSHVPAHSQLAW--------VLGCFTGFGQ 108

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S  +   S +   F Y +LQA D +     YD  L   G DQ  ++   
Sbjct: 109 ASRMTQFKD-KSTRQGADSATVGLFTYPVLQAADVLA----YDAELVPVGEDQRQHLELA 163

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            D+ +R           P +     T     L        +  S         +      
Sbjct: 164 RDIAQRFNGRFPDTFVVPDVLIPKITAKIYDLQDPTSKMSKSASTDAGLISLLDAPAVSA 223

Query: 270 VSFAKRLTTLPMS 282
                 +T     
Sbjct: 224 KKIRSAVTDSERE 236


>gi|259416443|ref|ZP_05740363.1| pseudouridine synthase, Rsu [Silicibacter sp. TrichCH4B]
 gi|259347882|gb|EEW59659.1| pseudouridine synthase, Rsu [Silicibacter sp. TrichCH4B]
          Length = 410

 Score = 45.9 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + G  +  ++ +AG   S  EA R +    + +N ++I +  L +   D  
Sbjct: 59  AEGDRIAKVLSRAG-VASRREAERMITEGRVAVNGAVIDSPALNVTGSDRI 108


>gi|194871697|ref|XP_001972889.1| GG13636 [Drosophila erecta]
 gi|190654672|gb|EDV51915.1| GG13636 [Drosophila erecta]
          Length = 662

 Score = 45.9 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 84/274 (30%), Gaps = 42/274 (15%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSI 80
           +     +   S+     + G   T  SLH G+    +     LQ         +    SI
Sbjct: 64  TGESGYEDHNSRWPRKIFSGIQPTG-SLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSI 122

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
                             ++ENI  +    ++ +  G   T + +          ++  +
Sbjct: 123 T----------MPHNPPLLRENIFTM---AATLLACGIDPTKSTLFVQSAVAAHAEFNWI 169

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  + +   + ++  F   +SRL ++  L    + Y +LQA D   L K     +   G+
Sbjct: 170 LSSMTTMPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAADI-MLYKATHVPV---GA 222

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTT--------------ASGTKMGKTLSGAIW 246
           DQ  +I     L         +  T P+ T                   KM K+ +    
Sbjct: 223 DQIQHIQLAQHLARTYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKA 280

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
                 SP    Q  +      V  F   +T  P
Sbjct: 281 TINLCDSPDLITQKIK----KAVTDFTSDITYNP 310


>gi|227506077|ref|ZP_03936126.1| S4 domain protein [Corynebacterium striatum ATCC 6940]
 gi|227197359|gb|EEI77407.1| S4 domain protein [Corynebacterium striatum ATCC 6940]
          Length = 95

 Score = 45.9 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 19/55 (34%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +        + L   I  A    +  EA+  +    +++N  +++     +   D
Sbjct: 2   LEVSIKGDSIKLGQFIKLASLVATGGEAKELIAQGEVQVNGEVVTQRGATLHPGD 56


>gi|297158130|gb|ADI07842.1| tryptophanyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 337

 Score = 45.9 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ+T H    ++    +I                  +
Sbjct: 11  GIQPTAGSFHLGNYLGAIRQYVALQET-HDAFYMVVDLHAIT----------VPQDPAAL 59

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N           +  G       +          +   ++  +  F   +RM  F+  
Sbjct: 60  RANTRLAAAQL---LASGLDPDRCTLFIQSHVPEHAQLAWVMNCLTGFGEASRMTQFKD- 115

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           ++  +     +   F Y ILQ  D + L +     +   G DQ  ++    D+ ER    
Sbjct: 116 KTAKQGADRATVGLFTYPILQVADIL-LYQANHVPV---GEDQRQHVELTRDIAERFNGR 171

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
               F + +P +   +G          KM K+ S    +   +  P    +  ++
Sbjct: 172 FGDTFTIPAPHIVKETGKIYDLQDPAIKMSKSASTPKGIISLLDEPKVSAKKIKS 226


>gi|284165504|ref|YP_003403783.1| ribosomal protein S4E, central domain protein [Haloterrigena
           turkmenica DSM 5511]
 gi|284015159|gb|ADB61110.1| Ribosomal protein S4E, central domain protein [Haloterrigena
           turkmenica DSM 5511]
          Length = 233

 Score = 45.9 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
             G+ L+ L+    G+  S  EAR  L  +AI +N   I++EK  I + D 
Sbjct: 34  EEGVPLVVLLRDVLGYVDSKKEARYALSEDAILVNGEPINDEKRPIGIFDI 84


>gi|409696|gb|AAB60257.1| tryptophanyl tRNA synthetase [Oryctolagus cuniculus]
          Length = 149

 Score = 45.9 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27 LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          LD   ++     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 20 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQD 58


>gi|66362732|ref|XP_628332.1| tryptophanyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|46229385|gb|EAK90203.1| tryptophanyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|323509469|dbj|BAJ77627.1| cgd7_1490 [Cryptosporidium parvum]
          Length = 593

 Score = 45.9 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 86/268 (32%), Gaps = 36/268 (13%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F+ +    LS R F       + LD+     +   Y G   ++ SLH GHL   +   +L
Sbjct: 251 FRRNIF--LSHRDF------EKILDVYEKGELFYLYTGRGPSSESLHVGHLVPFLFTKYL 302

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q T   P+ +       + D    DE      +  ++E            I  G      
Sbjct: 303 QDTFKVPLVI------QLTD----DEKFIFKSNLTLEETHNYAYENMKDIIACGFDPELT 352

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  ++  +              + + +S   ++S    + S +  +F +  +QA  
Sbjct: 353 FIFTNLEYIAELYP--------DILRIEKKISCSQIKSIFGFKDSCNVGKFAFPAVQAAP 404

Query: 184 FVELA-------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
               +       +     L     DQ        D+  RL   K   + ++  P L  + 
Sbjct: 405 AFSSSFPHIFGGRTDIHCLVPHAIDQDPYFRMVRDVAPRLGYLKPSSIHSIFLPSLQGSQ 464

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
                   + +I++N    S  N    +
Sbjct: 465 TKMSASVQNSSIFVNDNEESIRNKIMKY 492


>gi|118376902|ref|XP_001021633.1| hypothetical protein TTHERM_00149980 [Tetrahymena thermophila]
 gi|89303399|gb|EAS01387.1| hypothetical protein TTHERM_00149980 [Tetrahymena thermophila
           SB210]
          Length = 433

 Score = 45.9 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 70/246 (28%), Gaps = 30/246 (12%)

Query: 17  FIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISL 73
           F  +I    EL  L S       Y G++ +   +H   G +  + +   L   G   I  
Sbjct: 67  FAEEIIQENELVKLLSTKQFPICYDGFEPSGR-MHIAQGIMRAINVNK-LVDAGCIFIFW 124

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    +++ +   + +          +  IE  K         G    +   L     + 
Sbjct: 125 VADWFALLNN---KMDGDLDKIRTVGRYFIETWKA-------AGMKMHNVKFLWCSDEIN 174

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                  L+ I      N     +  +         L+  +  Y  +Q  D   L  +  
Sbjct: 175 KKSNDYWLQVIDVARKFNITRMKKCSQIMGRAESDELAVSQLLYPAMQCTDIFHLKADIC 234

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--------TTASGTKMGKTLSGA 244
                 G DQ    +   D   +      + L +P++              KM K+   +
Sbjct: 235 SL----GLDQRKVNMLARDYVAKPDNN--YKLHTPVIVSHHMLSGLKEGQAKMSKSDPMS 288

Query: 245 IWLNKE 250
               ++
Sbjct: 289 AIFMED 294


>gi|126739258|ref|ZP_01754952.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           SK209-2-6]
 gi|126719875|gb|EBA16583.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           SK209-2-6]
          Length = 377

 Score = 45.9 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           S G  +  ++ +AG   S  EA R +    I +N ++I +  L +  Q+  
Sbjct: 66  STGDRIAKVLSRAG-VASRREAERMIAEGRISVNGTVIDSPALNVTGQERI 115


>gi|114566930|ref|YP_754084.1| ribosomal large subunit pseudouridine synthaseB [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114337865|gb|ABI68713.1| ribosomal large subunit pseudouridine synthase B [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 239

 Score = 45.9 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   + ++G  +S  +A R +    +K+N+  I+     +K  D
Sbjct: 1   MRLAKYLAESGI-SSRRQAERLITQGKVKVNDKTITELAFTLKPGD 45


>gi|255081786|ref|XP_002508115.1| tRNA synthetase [Micromonas sp. RCC299]
 gi|226523391|gb|ACO69373.1| tRNA synthetase [Micromonas sp. RCC299]
          Length = 495

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 6/59 (10%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R     ++                Y G   ++ +LH GHL       WLQ+    P+ +
Sbjct: 76  RELDQIVTAYE------KGEKFYLYTGRGPSSEALHLGHLIPFHFTRWLQEAFKVPLVI 128


>gi|317129612|ref|YP_004095894.1| tryptophanyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474560|gb|ADU31163.1| tryptophanyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 329

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 93/348 (26%), Gaps = 45/348 (12%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK--PISLMGGGTSIIGDPSFRDESRRMM 94
           T + G   + + L  G+    M         H+      +    +             + 
Sbjct: 3   TIFSGIQPSGT-LTLGNYLGAMK--HFVDLQHENNCYFCIVDQHA-------------IT 46

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRM 153
             QE     + I+ + + ++  G     + +         +     L  I    S +  +
Sbjct: 47  VPQEKLTLKKNIRSLAALYLAVGIDHNKSTLFIQSE----VPAHAQLGWIMQCVSYIGEL 102

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   ++ +S     Y  L A D +     Y   +   G DQ  ++    DL 
Sbjct: 103 ERMTQFKDKSAGKEGVSSALLTYPPLMAADIL----LYGTDIVPVGEDQKQHLELTRDLA 158

Query: 214 ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           ER         T P +          +L+       +       +    + +   +    
Sbjct: 159 ERFNKKYNDIFTIPEVKIPKVGARIMSLTEPTKKMSKSNPNPKSFISMLDEEKTIIKKIK 218

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             +T               +   E K  +A  ++       E+  +              
Sbjct: 219 SAVTDSENE---------VRFDKENKPGVANLLSIYSLCTGESIDSLENKYVGKGYGDFK 269

Query: 334 QHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLK 373
             +    +S          E+     L  +I+  G   +  EA + LK
Sbjct: 270 SDVAEAVVSVIKPIQERYYELIESEEL-DVILDHGAEKANKEAFKMLK 316


>gi|300779713|ref|ZP_07089569.1| tryptophan--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300533823|gb|EFK54882.1| tryptophan--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 342

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 80/258 (31%), Gaps = 33/258 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                   G   TA S H G+    +     LQ + +     +    +I  D        
Sbjct: 8   DEKQRVLSGIQPTADSYHLGNYLGALKQWIDLQDS-YDAFYFIPDLHAITVD-------- 58

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                +E++             I  G     + +          +   +L+ +  F   +
Sbjct: 59  --QNPEELRTRTIAGCAQL---IALGIDPEKSTLFVQSHVPEHAELTWVLQCLTGFGEAS 113

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  + +   S   F Y +L A D +     Y   L   G DQ  ++     
Sbjct: 114 RMTQFKD-KSAKQGQDRTSVGLFTYPMLMAADIL----LYSPHLVPVGEDQRQHLELTRT 168

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L ER      + F +    +   S           KM K+ S    +   +  P    + 
Sbjct: 169 LAERFNSRFGETFVVPEGFIPEGSAKIYDLQEPTAKMSKSGSNPKGIINLLDEPKTSAKR 228

Query: 261 WRN--IDDADVVSFAKRL 276
            R+   DD  V++F +  
Sbjct: 229 IRSAVTDDDGVIAFDRET 246


>gi|53715320|ref|YP_101312.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis YCH46]
 gi|60683253|ref|YP_213397.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis NCTC 9343]
 gi|253567210|ref|ZP_04844660.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 3_2_5]
 gi|265767806|ref|ZP_06095338.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|52218185|dbj|BAD50778.1| tryptophanyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60494687|emb|CAH09488.1| putative tryptophanyl-tRNA synthetase [Bacteroides fragilis NCTC
           9343]
 gi|251944041|gb|EES84560.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 3_2_5]
 gi|263252478|gb|EEZ24006.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301164772|emb|CBW24331.1| putative tryptophanyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 363

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 69/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  +   ++++
Sbjct: 13  PTGK-LHIGHYVGSLKRRVELQNSGSFDKTFIFIADAQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPEKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMIEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L +E             
Sbjct: 176 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLAEEADEIQKKVMSMFT 230


>gi|289579910|ref|YP_003478376.1| ribosomal protein S4E, central domain protein [Natrialba magadii
           ATCC 43099]
 gi|289529463|gb|ADD03814.1| Ribosomal protein S4E, central domain protein [Natrialba magadii
           ATCC 43099]
          Length = 235

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G+ L+ L+    G+  S  EAR  L  ++I +N   I++E+  I + D  
Sbjct: 34  EEGVPLVVLLRDVLGYVDSKKEARYALSQDSILVNGEPINDEQRPIGIFDII 85


>gi|123413422|ref|XP_001304275.1| tryptophanyl-tRNA synthetase [Trichomonas vaginalis G3]
 gi|121885715|gb|EAX91345.1| putative tryptophanyl-tRNA synthetase [Trichomonas vaginalis G3]
          Length = 393

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 92/356 (25%), Gaps = 42/356 (11%)

Query: 12  LSERGF------IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
             +RG       + QI     LD       V  Y G   ++ +LH GH+T  ++  ++Q 
Sbjct: 48  FMKRGLYFCHRELEQI-----LDAKEKGKQVYIYTGRGPSSDALHLGHITSFIINKYIQD 102

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
                  +       I D       R    S E     +  +      I  G       +
Sbjct: 103 ALDCWFII------QITD--DEKFMRDNDLSWETIH--KYTEANIRDIIAQGYDPERTFI 152

Query: 126 LNNETWLCS-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +    W      ++  L    S  ++  +  F    S       +  +   +   Q +  
Sbjct: 153 MRESKWFNICQPFLGELSRYMSLHTIQSIFGFTEEHSAGYVLFPVRQIAPAFP--QYFPG 210

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDL---GERLKTPKLFALTSPLLTTASGTKMGKTL 241
           V         L   G +Q        ++    +  +   ++    P L         K  
Sbjct: 211 VFKDPKKTYCLIPCGREQDPYFRFAREVAGKMKVNRVSTIYGRFIPALQGDQKMTASKNS 270

Query: 242 SGAIW-----------LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
           +                N   TS     Q      D         L      E  R    
Sbjct: 271 TAIYLTDTPEMIREKIFNYAYTSYNEDEQGADLTTDVCFKYLEAFLDDDDKLEEARRRYG 330

Query: 291 QGKEINEAKKIIA----TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
           +G ++ E +  +      E+ T V            A    ++    + +    I 
Sbjct: 331 KGGQLKEGETRMTVNDVKELLTKVLTDLVVTHQQRKAAITPELVAKYEEIKKAPIP 386


>gi|255642475|gb|ACU21501.1| unknown [Glycine max]
          Length = 192

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +   RG      +  E LD          Y G   ++ +LH GHL   M   +LQ 
Sbjct: 65  VFLRRGVFFAHRDFAEILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQD 120


>gi|328955260|ref|YP_004372593.1| tryptophanyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455584|gb|AEB06778.1| tryptophanyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 349

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 73/247 (29%), Gaps = 35/247 (14%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYI---GYDLTASSLHAGHLTQLMLLF-WLQKTGHK 69
           ER +   +    E++   +      Y    G   T   LH GH    + L   LQ  G +
Sbjct: 4   ERSYEASLRRSEEIEADLAVHPRR-YTMLTGDRPTGR-LHLGHYLGSLKLRVELQDMGVR 61

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+     I    + RD +  +         I+ +              +     N  
Sbjct: 62  TSVLIADYQVI----TDRDTTEHIQD-NVRNMVIDYLACGIDPAKTMIYTHSAVPAANQL 116

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVELA 188
                      +    S  S   +L   +V++ +      L+ L   Y + Q+ D +   
Sbjct: 117 -----------ILPFLSLVSEAELLRNPTVKAEMAASGHELTGLLLTYPVHQSCDIL--- 162

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--------KLFALTSPLLTTASGTKMGKT 240
                 +   G DQ  +I     +  R                 + P+L    G KM K+
Sbjct: 163 -FCKGNIVPVGRDQLPHIELTRSIARRFNKRYRKIFPEVDALLSSVPVLPGLDGRKMSKS 221

Query: 241 LSGAIWL 247
              AI L
Sbjct: 222 YGNAIAL 228


>gi|296101071|ref|YP_003611217.1| tryptophanyl-tRNA synthetase II [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055530|gb|ADF60268.1| tryptophanyl-tRNA synthetase II [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 333

 Score = 45.5 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 88/324 (27%), Gaps = 40/324 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              T   G   T   LH GH    +     LQ+T H    L+     +         +  
Sbjct: 2   NPQTILTGDRPTGP-LHLGHFVGSLRQRVALQQT-HNQFVLIADLQGL---------TDN 50

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               Q+I++NI ++              T   + +    L  +  + +     +    N 
Sbjct: 51  GSNPQKIRDNISEVLA-DYLAAGIDPNLTTICLQSALPALAELTMLYMNIVTVARVERNP 109

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + F    Y I QA D               G DQ   I    ++
Sbjct: 110 TVKNEIAQKGFARSLPVGF--MAYPISQAADITAFKAEC----VPVGDDQLPMIEQTNEI 163

Query: 213 GERL----------KTPKLFALTSPLLTTASGTKMGKTLSGA-------IWLNKEMTSPY 255
             ++              + + TS L       KM K+L            +++ +++ Y
Sbjct: 164 VHKMNSLLPAPVLRHCKAMLSDTSRLPGIDGSAKMSKSLGNTLHLSASEETIHRAVSAMY 223

Query: 256 NFWQYWRNIDDADVV---SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
               + +  D   +     F       P  E     K   +      ++   E       
Sbjct: 224 TDPNHLKVSDPGQIEGNVVFTYLDAFHPDKEKVAAMKAHYQLGGLGDRVCKNE-LEGCLQ 282

Query: 313 REEAEKAATAAMECFDMSIHSQHM 336
              A      AM   D       +
Sbjct: 283 ELIAPMRERRAMYMRDKGELMAML 306


>gi|242556766|pdb|3HV0|A Chain A, Tryptophanyl-Trna Synthetase From Cryptosporidium Parvum
 gi|242556767|pdb|3HV0|B Chain B, Tryptophanyl-Trna Synthetase From Cryptosporidium Parvum
          Length = 393

 Score = 45.5 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 86/268 (32%), Gaps = 36/268 (13%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F+ +    LS R F       + LD+     +   Y G   ++ SLH GHL   +   +L
Sbjct: 51  FRRNIF--LSHRDF------EKILDVYEKGELFYLYTGRGPSSESLHVGHLVPFLFTKYL 102

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q T   P+ +       + D    DE      +  ++E            I  G      
Sbjct: 103 QDTFKVPLVI------QLTD----DEKFIFKSNLTLEETHNYAYENMKDIIACGFDPELT 152

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  ++  +              + + +S   ++S    + S +  +F +  +QA  
Sbjct: 153 FIFTNLEYIAELYP--------DILRIEKKISCSQIKSIFGFKDSCNVGKFAFPAVQAAP 204

Query: 184 FVELA-------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
               +       +     L     DQ        D+  RL   K   + ++  P L  + 
Sbjct: 205 AFSSSFPHIFGGRTDIHCLVPHAIDQDPYFRMVRDVAPRLGYLKPSSIHSIFLPSLQGSQ 264

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
                   + +I++N    S  N    +
Sbjct: 265 TKMSASVQNSSIFVNDNEESIRNKIMKY 292


>gi|189219721|ref|YP_001940362.1| Tryptophanyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186579|gb|ACD83764.1| Tryptophanyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 323

 Score = 45.5 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 105/342 (30%), Gaps = 53/342 (15%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQ 97
           G   +   LH G+   ++      Q    + +  +    ++  I DP             
Sbjct: 8   GIQPSG-HLHIGNYFGMIKRAIEWQDKA-QTLYFIADYHALTSIKDP------------- 52

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
             Q   + ++ I  +F+  G     ++     +     +  +L   + S      +    
Sbjct: 53  --QNLRQYVRKIAMAFLACGLDPAKSIFFRQSSI---PEVHELAWILSSITPFGLLERSH 107

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-- 215
           S + ++ +  S +   F+Y +L A D +     Y   +   G DQ  ++    D+  +  
Sbjct: 108 SFKDKIAKGLSPTLALFSYPVLMASDIL----LYQSEIIPVGQDQKQHLEIARDIAHKFN 163

Query: 216 LKTPKLFALTSP-------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
               ++F +  P       ++    G KM K+ +  +   +    P  F +   +I    
Sbjct: 164 HTYGEVFRIPEPDIQEEVAVIPGIDGQKMSKSYNNTL---EIFGDPEEFKRRVMSIKTDS 220

Query: 269 --------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
                         V  +    +     E     K  G+     KK++  ++        
Sbjct: 221 TPVASPKPIQGSILVNLYKLVASPAEYEEFVESMKKGGQGYAYYKKLLLEKLNAYFKPIR 280

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E            D  +         IS++ + +    + L+
Sbjct: 281 ERYLELERNPSYVDEVLADGAYKARMISQETLRKVRQAVGLL 322


>gi|75992970|gb|ABA33688.1| TyrS-like protein [Haemophilus parasuis]
          Length = 53

 Score = 45.5 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           A    +  F        MP  +         +GL TL+ +AG   ST+EA R  + 
Sbjct: 3   AEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLKEAGLVPSTSEAIRSAQQ 53


>gi|302519518|ref|ZP_07271860.1| tryptophanyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302428413|gb|EFL00229.1| tryptophanyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 337

 Score = 45.5 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 76/245 (31%), Gaps = 31/245 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   +A S H G+    +     LQ++ H    ++    + I  P   D 
Sbjct: 1   MASERSRVLSGIQPSAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDMHA-ITVPQDPDT 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     I    S+       +  A +            ++ L   G    
Sbjct: 59  LRANTRLSAAQLLAAGIDPERSALFVQSHVREHAELAW---------IMNCLTGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       ++  +  +  +   F Y +LQ  D + L + +   +   G DQ  ++   
Sbjct: 110 MTQFKD----KAAKQGAEGTTVGLFTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELT 161

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER      + F +    +   +           KM K+ +    L   M  P    
Sbjct: 162 RDLAERFNARYGETFVVPEAYILKETAKIYDLQEPSAKMSKSAASPKGLVNLMDEPKATA 221

Query: 259 QYWRN 263
           +  ++
Sbjct: 222 KKIKS 226


>gi|283852402|ref|ZP_06369672.1| tryptophanyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283572250|gb|EFC20240.1| tryptophanyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 335

 Score = 45.5 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 92/313 (29%), Gaps = 48/313 (15%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSII---GDPSFRD 88
           +       G   T   LH GH   ++     LQ+T H+    +    ++     DP    
Sbjct: 7   KENKRIVSGMRPTGP-LHLGHYFGVLKNWINLQET-HQCYFFVADWHALTTEYADPR--- 61

Query: 89  ESR-RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
             R +    + +++ +             G      ++          +   LL  +   
Sbjct: 62  --RIKGFVPELVKDWVAG-----------GLDPEKCVIFQQSQVKEHAELHLLLSMLTPV 108

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             + R  +++   + L  +   ++    Y +L A D +     Y       G DQ  ++ 
Sbjct: 109 SWLERCPTYKDQLTELAAKDLTTYGFLGYPVLMASDIL----LYKSGFVPVGQDQLPHLE 164

Query: 208 CGIDLGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
              ++  R               LT    L    G KM K+   AI L+++  +      
Sbjct: 165 LTREIARRANHLYGNFFPEPQALLTPDAKLAGLDGRKMSKSYGNAIGLSEDPATMKKKVM 224

Query: 260 YWRNIDDA------------DVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEI 306
                               ++  + + LT      EI            + KK++   +
Sbjct: 225 GMLTCAKRARLADPGDPKECNLFPYHELLTDPARLPEIVEGCTTATWGCGDCKKLLVESM 284

Query: 307 TTMVHGREEAEKA 319
              +    +  +A
Sbjct: 285 NAFLEPIRDRRQA 297


>gi|229825235|ref|ZP_04451304.1| hypothetical protein GCWU000182_00588 [Abiotrophia defectiva ATCC
           49176]
 gi|229790607|gb|EEP26721.1| hypothetical protein GCWU000182_00588 [Abiotrophia defectiva ATCC
           49176]
          Length = 360

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 61/197 (30%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGK-LHLGHYVGSLKRRVELQNSGEFDEIYIMIADAQAL---------TDNAENPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +    +     K    + +    LC + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYLSVGLDPEKCTLFIQSQIPELCELSFYYMDLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +       G DQ   I    ++  +  +  
Sbjct: 120 RNFETSIPVGF--FTYPISQAADITAFKATH----VPVGEDQEPMIEQTREIVRKFNSTY 173

Query: 221 LFALTSPLLTTASGTKM 237
             AL  P +        
Sbjct: 174 NEALVEPNIMLPDNEAC 190


>gi|167765427|ref|ZP_02437540.1| hypothetical protein BACSTE_03817 [Bacteroides stercoris ATCC
           43183]
 gi|167697055|gb|EDS13634.1| hypothetical protein BACSTE_03817 [Bacteroides stercoris ATCC
           43183]
          Length = 364

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 46/331 (13%), Positives = 91/331 (27%), Gaps = 36/331 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  M   ++++
Sbjct: 13  PTGR-LHIGHYVGSLRRRVELQNSGLYDKTFVFIADAQAL---------TDNMENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMIEQAREIVRRFNFIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
              L  P +             T    KM K+L   I+L+          +      D  
Sbjct: 176 GDTLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADEIQKKVKSMYTDPDHL 235

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            V    ++    +                     + E     + R               
Sbjct: 236 RVQDPGKIEGNTVFTYLDAFCHPEHFERYLPDYPSLEELKAHYQRGGLGDMKVKGFL--- 292

Query: 329 MSIHSQHMPTISISKDEVSRGMG-LLTLIVK 358
            +I  + +  I   + E  + +  +  ++ K
Sbjct: 293 NNIMQETLEPIRNRRKEFEKDIPAIYDMLKK 323


>gi|42409158|dbj|BAD10425.1| putative tyrosine-tRNA ligase [Oryza sativa Japonica Group]
 gi|50508147|dbj|BAD30722.1| putative tyrosine-tRNA ligase [Oryza sativa Japonica Group]
          Length = 329

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 69/223 (30%), Gaps = 28/223 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           RG   +     EL  L  +  V   Y G++ +   +H          +  +      G K
Sbjct: 42  RGIGEECIQEDELMNLLQKKPVPICYDGFEPSGR-MHIAQGIVKTINVNKMVR---AGCK 97

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    + + +    D          +++     + +   +   G        L + 
Sbjct: 98  VKIWIADWFAQLNNKMGGD----------LKKIQTVGRYMIEIWRAAGMNLDGVEFLWSS 147

Query: 130 TWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             + +   +Y  L+ +I    +V R++    +  R   ++ L+  +  Y  +Q  D   L
Sbjct: 148 EEINNRANEYWPLVMDIACKNNVKRIMRCCQIMGRNDSDE-LTAAQIFYPCMQCADIFFL 206

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
                  +   G DQ    +      ++   P      +P L 
Sbjct: 207 K----ADICQLGMDQRKAQVNLK--IKQAFCPPNVVDGNPCLE 243


>gi|151945537|gb|EDN63778.1| tryptophanyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 432

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQE 132


>gi|154274852|ref|XP_001538277.1| tryptophanyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150414717|gb|EDN10079.1| tryptophanyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 390

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 75/252 (29%), Gaps = 24/252 (9%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 33  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 92

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 ++ D    DE      +   ++  +         I  G       + ++  ++ 
Sbjct: 93  ------MLTD----DEKALFKDNLTFEDTYKFGLQNAKDIIACGFDLKKTFIFSDLDYVK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               +++          +++++F  VR      +S +     +  +Q   + +      C
Sbjct: 143 GHFLMNVWE-------FSKLVTFNQVRGAFGFNESTNIGRIMFPAVQ---WTKDIGKIPC 192

Query: 194 RLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            + M   DQ        D   R++   PK   + S  LT   G     + S         
Sbjct: 193 LIPM-AIDQDPYFRLVRDNASRMRFPGPKPALIHSKFLTALQGIGGKMSASDPNSAIFMT 251

Query: 252 TSPYNFWQYWRN 263
            +P    +    
Sbjct: 252 DTPNQIKKKIMK 263


>gi|51013347|gb|AAT92967.1| YOL097C [Saccharomyces cerevisiae]
          Length = 432

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQE 132


>gi|288965772|pdb|3KT0|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet
 gi|288965774|pdb|3KT3|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trpamp
 gi|288965775|pdb|3KT3|B Chain B, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trpamp
 gi|288965776|pdb|3KT3|C Chain C, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trpamp
 gi|288965777|pdb|3KT3|D Chain D, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trpamp
 gi|288965779|pdb|3KT6|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trp
 gi|288965780|pdb|3KT6|B Chain B, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trp
 gi|288965781|pdb|3KT6|C Chain C, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trp
 gi|288965782|pdb|3KT6|D Chain D, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trp
 gi|288965783|pdb|3KT8|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With L-Tryptophanamide
 gi|288965784|pdb|3KT8|B Chain B, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With L-Tryptophanamide
 gi|288965785|pdb|3KT8|C Chain C, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With L-Tryptophanamide
 gi|288965786|pdb|3KT8|D Chain D, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With L-Tryptophanamide
          Length = 438

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQE 132


>gi|6324475|ref|NP_014544.1| Wrs1p [Saccharomyces cerevisiae S288c]
 gi|2501074|sp|Q12109|SYWC_YEAST RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|151567662|pdb|2IP1|A Chain A, Crystal Structure Analysis Of S. Cerevisiae Tryptophanyl
           Trna Synthetase
 gi|663256|emb|CAA88164.1| orf [Saccharomyces cerevisiae]
 gi|1419948|emb|CAA99110.1| WRS1 [Saccharomyces cerevisiae]
 gi|259149389|emb|CAY86193.1| Wrs1p [Saccharomyces cerevisiae EC1118]
 gi|285814794|tpg|DAA10687.1| TPA: Wrs1p [Saccharomyces cerevisiae S288c]
 gi|323303127|gb|EGA56929.1| Wrs1p [Saccharomyces cerevisiae FostersB]
 gi|323307060|gb|EGA60343.1| Wrs1p [Saccharomyces cerevisiae FostersO]
 gi|323335627|gb|EGA76910.1| Wrs1p [Saccharomyces cerevisiae Vin13]
 gi|323346693|gb|EGA80977.1| Wrs1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352308|gb|EGA84843.1| Wrs1p [Saccharomyces cerevisiae VL3]
          Length = 432

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQE 132


>gi|51245496|ref|YP_065380.1| tryptophanyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50876533|emb|CAG36373.1| probable tryptophanyl-tRNA ligase [Desulfotalea psychrophila LSv54]
          Length = 325

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 70/241 (29%), Gaps = 35/241 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQE 98
           G   +   LH G+   +M     Q         +    ++  + DP       +++    
Sbjct: 10  GIQPSGQ-LHIGNYFGMMQTMIDQMESSDLHVFIVDYHALTSVRDP-------KVLAKGT 61

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ++   + +             ++D   +    WL           +     +  +    S
Sbjct: 62  LEAAADFLALGLDPDKCTFWVQSDVPAVCELMWL-----------LSVLTPMGLVERCHS 110

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +    S   F+Y +L A D +     Y   +   G DQ  ++    DL ++   
Sbjct: 111 YKDKVAKGIQASHGLFSYPVLMAADIL----LYQADIVPVGKDQKQHLEFARDLAQKFNN 166

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                 T P          +    G KM K+    I +  E   P          D   +
Sbjct: 167 EYGETFTIPEPGISKHTATIPGLDGQKMSKSYGNTIPIFSEG-KPLKKRVMAIETDAKGI 225

Query: 270 V 270
            
Sbjct: 226 E 226


>gi|323698548|ref|ZP_08110460.1| tryptophanyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458480|gb|EGB14345.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 329

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 38/236 (16%)

Query: 33  QGVVTAYIGYDLTASSLHAGHL--TQLMLLFWLQKTGHKPISLMGGGTSII---GDPSFR 87
                   G   T   LH GH        L  +Q+  +     +    ++     DP   
Sbjct: 2   SEKQRILSGMRPTGP-LHLGHYFGVIANWLK-MQEE-YDCYFFVADWHALTSEYADP--- 55

Query: 88  DESR-RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
             +R +      +++ +             G       +          +   +L     
Sbjct: 56  --TRIKGFIPGLVKDWVAA-----------GLDPEKCSIFQQSQIKEHAELNLILSMYTP 102

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + R  +F+  + +L ++   +     Y +L + D + + K     +   G DQ  ++
Sbjct: 103 LGWLERCPTFKDQKEQLTQKDLNTHGFLGYPVLMSVDIL-MYKPLAVPV---GKDQLPHL 158

Query: 207 ICGIDLGERLKT--------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTS 253
               ++  R                LT +P+L    G KM K+   +I L++ +  
Sbjct: 159 ELTREIARRFNHLNNTDLFPEPADMLTEAPVLPGLDGRKMSKSYGNSIMLSEPLDE 214


>gi|156841474|ref|XP_001644110.1| hypothetical protein Kpol_505p29 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114745|gb|EDO16252.1| hypothetical protein Kpol_505p29 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 482

 Score = 45.5 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 41/144 (28%), Gaps = 12/144 (8%)

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           R +    +  +   K Q    N+                             F   + S 
Sbjct: 17  RASFNKFNLFNLYKKGQVNFRNKNLYQQKWTAKQETRSYHGEHIREGRWQSMFQSKLDSV 76

Query: 335 HMPTISISKDEVSRGMGLLT-----------LIVKAGFATSTNEARRHLKSNAIKINNSI 383
                S+    V     LL             + ++ FA+S  +AR+ +    + +N + 
Sbjct: 77  AQLDASLRGSAVQETPFLLQTYSVLEKRLDFALFRSMFASSIRQARQFIIHGNVYVNGTK 136

Query: 384 ISNEKLQIKLQD-FDSTGNIKLSF 406
           + +    +K  D F+    + L  
Sbjct: 137 VKHPGYTLKPGDMFNVKPEMVLKA 160


>gi|190407252|gb|EDV10519.1| tryptophanyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207341437|gb|EDZ69497.1| YOL097Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 432

 Score = 45.5 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQE 132


>gi|256271420|gb|EEU06481.1| Wrs1p [Saccharomyces cerevisiae JAY291]
          Length = 432

 Score = 45.5 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           LD+         Y G   ++ S+H GH+   +   WLQ+
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQE 132


>gi|30685869|ref|NP_850222.1| tRNA synthetase class I (W and Y) family protein [Arabidopsis
           thaliana]
 gi|18700119|gb|AAL77671.1| At2g33840/T1B8.14 [Arabidopsis thaliana]
 gi|21464573|gb|AAM52241.1| At2g33840/T1B8.14 [Arabidopsis thaliana]
 gi|330253800|gb|AEC08894.1| tyrosyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 385

 Score = 45.5 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 25/244 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L ++      Y G++ +   +H   G +  + +   +   G +  
Sbjct: 47  RSIGEECIQEEELKNLLAKKAAPICYDGFEPSGR-MHIAQGVMKVINVNK-MTSAGCRVK 104

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +  +  +  QE  +            G        L +   
Sbjct: 105 IWIADWFAQLNNKMGGDLKKIRVVGEYFQEIWKAA----------GMDNDKVEFLWSSEE 154

Query: 132 LCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           + S   KY  L+ +I     + R+L    +  R + ++ LS  +  Y  +Q  D   L  
Sbjct: 155 INSKADKYWPLVMDIARKNKLPRILRCVQIMGRSETDE-LSAAQILYPCMQCADIFFL-- 211

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAIW 246
             +  +   G DQ    +   +  + +K   K   L+  +L        KM K+   +  
Sbjct: 212 --EADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPLSAI 269

Query: 247 LNKE 250
             ++
Sbjct: 270 FMED 273


>gi|146342900|ref|YP_001207948.1| putative pseudouridine synthase, Rsu:RNA-binding S4:pseudouridine
           synthase [Bradyrhizobium sp. ORS278]
 gi|146195706|emb|CAL79733.1| Putative Pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine
           synthase [Bradyrhizobium sp. ORS278]
          Length = 683

 Score = 45.5 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  +  ++ +AG A S  +A   +    + +N  II++  L +   D   
Sbjct: 363 KTGERIAKVLARAGLA-SRRDAEEMVTQGRVSVNGRIINSPALDVTENDEIK 413


>gi|84501543|ref|ZP_00999715.1| RNA pseudouridylate synthase family protein [Oceanicola batsensis
           HTCC2597]
 gi|84390164|gb|EAQ02723.1| RNA pseudouridylate synthase family protein [Oceanicola batsensis
           HTCC2597]
          Length = 331

 Score = 45.5 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             ++   G  +  ++ +AG   S  EA R +    I ++ ++I +  L +  
Sbjct: 4   PPEKPPAGDRIAKVLARAG-VASRREAERMIAEGRISVDGTVIDSPALNVTA 54


>gi|319900039|ref|YP_004159767.1| RNA-binding S4 domain protein [Bacteroides helcogenes P 36-108]
 gi|319415070|gb|ADV42181.1| RNA-binding S4 domain protein [Bacteroides helcogenes P 36-108]
          Length = 501

 Score = 45.5 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 39/162 (24%), Gaps = 1/162 (0%)

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             +                 PY   + + N D      +    +  P       A     
Sbjct: 150 RPRFNSEGEDRPQRPYNNDRPYGGDRSYGNSDRPYRPRYNGENSDRPQRPYGNNAGGDRP 209

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
                            +    +     +A    +     +          + +  + L 
Sbjct: 210 YRPHYNSNGGGRSGGYGNRDSYSRPIRRSADYDPNAKYSKKKQIEYKEQFVDPNEPIRLN 269

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             +  AG   S  EA   + +  + +N  +++    +IK  D
Sbjct: 270 KFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGD 310


>gi|332375901|gb|AEE63091.1| unknown [Dendroctonus ponderosae]
          Length = 370

 Score = 45.5 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 75/259 (28%), Gaps = 27/259 (10%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
            ++  +     + G   T  S+H G+    +     LQ      I  +            
Sbjct: 21  KLVADKYPPRVFSGIQPTG-SIHIGNYLGAISQWVKLQDQNEDLILSIVDLH-------- 71

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
              +        +  NI     + ++ +  G      ++          +    L  I  
Sbjct: 72  -SITLP-HDPHTLSTNI---LELTATLLGSGIDPNKVILFQQSNVHAHAELCWCLGCIS- 125

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
             ++ R+      + +    +++    F Y +LQA D +         + +G  DQ   I
Sbjct: 126 --TMARLAHLPQYKEKSASLKNIPLGLFVYPVLQAADIL---SYKSTHIPVG-EDQVQQI 179

Query: 207 ICGIDLGERLKTPKLFALTSPL---LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
               +L     +   F  T P+   + T+S     K+L        +            +
Sbjct: 180 QLCQELARMFNSK--FGETFPIPHTMITSSEYGRIKSLRDPSKKMSKSDPDEKSRICLTD 237

Query: 264 IDDADVVSFAKRLTTLPMS 282
             D  V +  K +T     
Sbjct: 238 APDVIVRNIKKAVTDFQSE 256


>gi|239618278|ref|YP_002941600.1| hemolysin A [Kosmotoga olearia TBF 19.5.1]
 gi|239507109|gb|ACR80596.1| hemolysin A [Kosmotoga olearia TBF 19.5.1]
          Length = 268

 Score = 45.5 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 9/60 (15%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIK-LQDFDSTGNIKL 404
            L+V   F +S + A   +K   + IN  I+         + K++I  L+D+   G +KL
Sbjct: 9   ELLVARNFFSSRSRASDIIKQGKVSINGKIVKKPGKKVPLDIKIEINDLKDYVGRGYLKL 68


>gi|322615678|gb|EFY12598.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618738|gb|EFY15627.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322621848|gb|EFY18698.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627573|gb|EFY24364.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322630879|gb|EFY27643.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637902|gb|EFY34603.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642264|gb|EFY38871.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322643864|gb|EFY40412.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651058|gb|EFY47443.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322656687|gb|EFY52975.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659888|gb|EFY56131.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322661902|gb|EFY58118.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666351|gb|EFY62529.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672770|gb|EFY68881.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676200|gb|EFY72271.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680684|gb|EFY76722.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684422|gb|EFY80426.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323194241|gb|EFZ79438.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197386|gb|EFZ82526.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201496|gb|EFZ86560.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206010|gb|EFZ90972.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213022|gb|EFZ97824.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215394|gb|EGA00138.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219377|gb|EGA03862.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226198|gb|EGA10415.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228851|gb|EGA12980.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236538|gb|EGA20614.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239962|gb|EGA24009.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241992|gb|EGA26021.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247861|gb|EGA31798.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251500|gb|EGA35371.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258134|gb|EGA41811.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323263723|gb|EGA47244.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265683|gb|EGA49179.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270128|gb|EGA53576.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 337

 Score = 45.5 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 95/340 (27%), Gaps = 44/340 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------- 216
            R   + F    Y I QA D           +   G DQ   I    ++  ++       
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMNSLFSSP 175

Query: 217 ---KTPKLFALTSPLLTTASGTKMGKTLSGAIW-------LNKEMTSPYNFWQYWRNIDD 266
                  L + T  L       KM K+L   +        +++ +++ Y    + +  D 
Sbjct: 176 VLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSASEETIHRAVSAMYTDSNHLKISDP 235

Query: 267 ADVV--SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
             +        L      +    A     +       +             A      A 
Sbjct: 236 GKIEGNVVFTWLDAFHPDKAKVAAMKVHYQQGGLGDRVCKNELETCLQELIAPIRERRAT 295

Query: 325 ECFDMSIHSQHM--------PTISISKDEVSRGMGLLTLI 356
              D  +  + +             +  EV RG+GL TL 
Sbjct: 296 FIADKGMLMELLKKGSERAHEVTQKTLQEVKRGLGLPTLF 335


>gi|297823183|ref|XP_002879474.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325313|gb|EFH55733.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 385

 Score = 45.5 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 25/244 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L ++      Y G++ +   +H   G +  + +   +   G +  
Sbjct: 47  RSIGEECIQEEELKNLLAKKAAPICYDGFEPSGR-MHIAQGVMKVINVNK-MTSAGCRVK 104

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +  +  +  QE  +            G        L +   
Sbjct: 105 IWIADWFAQLNNKMGGDLKKIRVVGEYFQEIWKAA----------GMDNDKVEFLWSSEE 154

Query: 132 LCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           + S   KY  L+ +I     + R+L    +  R + ++ LS  +  Y  +Q  D   L  
Sbjct: 155 INSKADKYWPLVMDIARKNKLPRILRCVQIMGRSETDE-LSAAQILYPCMQCADIFFL-- 211

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAIW 246
             +  +   G DQ    +   +  + +K   K   L+  +L        KM K+   +  
Sbjct: 212 --EADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPLSAI 269

Query: 247 LNKE 250
             ++
Sbjct: 270 FMED 273


>gi|218783043|ref|YP_002434361.1| tryptophanyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218764427|gb|ACL06893.1| Tryptophanyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 327

 Score = 45.5 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 91/327 (27%), Gaps = 35/327 (10%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                 G   T   LH GHL   +     +Q   +     +    ++             
Sbjct: 3   KQRILSGMRPTGP-LHLGHLHGALANWKDMQDK-YDCFYFIADWHAL------------- 47

Query: 94  MRSQEIQENIEKIKGIFSSFI-KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
             + E   N    +          G     +            +   +L  I     + R
Sbjct: 48  TTNYEDTSNTAAFRTEMMIDWLSVGLDPAKSTFFVQSEVKEHAELFLILSMITPVPWLER 107

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
             +++    +++ +   +F    Y +LQA D + + K +   +   G DQ  ++    ++
Sbjct: 108 NPTYKDQIVQMENKDLSTFGFLGYPVLQAADII-MYKAHGVPV---GIDQVPHVELTREI 163

Query: 213 GERLKT--------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             R           PK     +P L  +   KM K+   AI L      P    Q    +
Sbjct: 164 VRRFNYMYGDVFVEPKAILTETPKLLGSDNRKMSKSYQNAINLA---DPPDVVSQKVSVM 220

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
                    ++         +  +  +     E  + +  E      G     K   AA 
Sbjct: 221 ITD--PQRMRKKDPGDPDICNVYSFHKIYSPPEMVEQVNKECRAAEIG-CVQCKKLMAAN 277

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMG 351
               +    +       ++DEV   + 
Sbjct: 278 LTAQLEPIYEKRVHFEKNRDEVEDIIK 304


>gi|329957331|ref|ZP_08297851.1| tryptophan--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523044|gb|EGF50147.1| tryptophan--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 364

 Score = 45.5 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 46/331 (13%), Positives = 91/331 (27%), Gaps = 36/331 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  M   ++++
Sbjct: 13  PTGR-LHIGHYVGSLRRRVELQNSGLYDKTFVFIADAQAL---------TDNMENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPAKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMIEQAREIVRRFNFIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
              L  P +             T    KM K+L   I+L+          +      D  
Sbjct: 176 GDTLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADEVQKKVKSMYTDPDHL 235

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            V    ++    +                     + E     + R               
Sbjct: 236 RVQDPGKIEGNTVFTYLDAFCRPEHFERYLPDYPSLEELKAHYQRGGLGDMKVKGFL--- 292

Query: 329 MSIHSQHMPTISISKDEVSRGMG-LLTLIVK 358
            +I  + +  I   + E  + +  +  ++ K
Sbjct: 293 NNIMQETLEPIRNRRKEFEKDIPAIYDMLKK 323


>gi|20198311|gb|AAC69137.2| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 351

 Score = 45.1 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 25/244 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L ++      Y G++ +   +H   G +  + +   +   G +  
Sbjct: 13  RSIGEECIQEEELKNLLAKKAAPICYDGFEPSGR-MHIAQGVMKVINVNK-MTSAGCRVK 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +  +  +  QE  +            G        L +   
Sbjct: 71  IWIADWFAQLNNKMGGDLKKIRVVGEYFQEIWKAA----------GMDNDKVEFLWSSEE 120

Query: 132 LCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           + S   KY  L+ +I     + R+L    +  R + ++ LS  +  Y  +Q  D   L  
Sbjct: 121 INSKADKYWPLVMDIARKNKLPRILRCVQIMGRSETDE-LSAAQILYPCMQCADIFFL-- 177

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTA--SGTKMGKTLSGAIW 246
             +  +   G DQ    +   +  + +K   K   L+  +L        KM K+   +  
Sbjct: 178 --EADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPLSAI 235

Query: 247 LNKE 250
             ++
Sbjct: 236 FMED 239


>gi|1841468|emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
          Length = 408

 Score = 45.1 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L ++      Y G++ +   +H   G L  L +   L   G K  
Sbjct: 68  RSIGEECIQEDELMNLLAKKPQPVCYDGFEPSGR-MHIAQGVLKALNVNK-LTSAGCKVK 125

Query: 72  SLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             +    + + +    D +   ++    I+        +    +++     +     +E 
Sbjct: 126 IWIADWFAQLNNKMGGDLKKIEVVGQYLIEIWKAVGMNLEGGHVEFLWSSKEINSRAHEY 185

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W        L+ ++     + R+L    +  R ++++ L+  +  Y  +Q  D   L   
Sbjct: 186 W-------PLVMDVARRNKLPRILRCCQIMGRSEQDE-LTAAQIFYPCMQCADIFFLK-- 235

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWL 247
               +   G DQ    +   +  + ++   K   L+  +L        KM K+   +   
Sbjct: 236 --ADICQLGMDQRKVNVLAREYCDDIRRKNKPIILSHHMLPGLQEGQEKMSKSDPSSSIY 293

Query: 248 NKE 250
            ++
Sbjct: 294 MED 296


>gi|145347608|ref|XP_001418255.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578484|gb|ABO96548.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 349

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 79/240 (32%), Gaps = 25/240 (10%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +   P EL  L  +      Y G++ +   +H   G +  L +   L K G      + 
Sbjct: 15  EECIQPDELRKLLEKKPTPVCYDGFEPSGR-MHIAQGVMKALNVNK-LTKIGCHFKFWVA 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS- 134
              +++ +    D          +++  +  K +   +   G        + +   +   
Sbjct: 73  DWFALMNNKMGGD----------LKKIQKVGKYMVEVWKAIGMDLDHVEFVWSSEEINKK 122

Query: 135 -IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
             +Y  L+ +I     + R+L    +  R + ++ L+  +  Y  +Q  D   L      
Sbjct: 123 ADEYWPLVLDIARKNKLARILRCSQIMGRSESDE-LAASQIFYPCMQCADIFFLK----A 177

Query: 194 RLQMGGSDQWGNIICGIDL---GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            +   G DQ    +   +     +R   P + +    +       KM K+   +    ++
Sbjct: 178 DICQLGMDQRKVNMLAREYCDDIKRKNKPIILSHHMLMGLKQGQEKMSKSDPDSAIFMED 237


>gi|320353051|ref|YP_004194390.1| tryptophanyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121553|gb|ADW17099.1| tryptophanyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 322

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 68/219 (31%), Gaps = 34/219 (15%)

Query: 41  GYDLTASSLHAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   +   LH G+   +M  ++  ++    +    +    ++          R  +R   
Sbjct: 7   GIQPSGK-LHIGNYFGMMHPMVRHMETA--ELYVFIVDLHALT-----SVHDRDRLRQGT 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ++   + +             ++D   +   +WL           +     +  +    +
Sbjct: 59  LEAAADFLALGLDPERCIFWVQSDVPEVCELSWL-----------LSVLTPMGLLERCHA 107

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +  + S   F Y +L A D +     Y   +   G DQ  ++    D+  R   
Sbjct: 108 YKDKVAKNIAASHGLFAYPVLMAADIL----LYQAEVVPVGKDQKQHVEVARDIAIRFNN 163

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                          T+ ++    G KM K+    I + 
Sbjct: 164 TFGETFVIPEPEIDETTAIVPGLDGQKMSKSYDNTIPIF 202


>gi|301308375|ref|ZP_07214329.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           20_3]
 gi|300833845|gb|EFK64461.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           20_3]
          Length = 495

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 254 ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 304


>gi|298374690|ref|ZP_06984648.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_1_19]
 gi|298269058|gb|EFI10713.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_1_19]
          Length = 495

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 254 ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 304


>gi|255012441|ref|ZP_05284567.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_7]
          Length = 495

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 254 ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 304


>gi|150003001|ref|YP_001297745.1| tryptophanyl-tRNA synthetase II [Bacteroides vulgatus ATCC 8482]
 gi|254883649|ref|ZP_05256359.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 4_3_47FAA]
 gi|294775636|ref|ZP_06741144.1| tryptophan--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319642213|ref|ZP_07996873.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|149931425|gb|ABR38123.1| tryptophanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254836442|gb|EET16751.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 4_3_47FAA]
 gi|294450480|gb|EFG18972.1| tryptophan--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317386199|gb|EFV67118.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 364

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLKRRVELQNSGLYDKTFIFIADAQAL---------TDNIENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +    +     K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYMAVGLDPMKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFK----ATTVPVGEDQEPMIEQTREIVRRFNHIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 176 GDTLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADEVEKKVKSMYT 230


>gi|150010293|ref|YP_001305036.1| ribosomal large subunit pseudouridine synthase B [Parabacteroides
           distasonis ATCC 8503]
 gi|256839144|ref|ZP_05544654.1| ribosomal large subunit pseudouridine synthase B [Parabacteroides
           sp. D13]
 gi|149938717|gb|ABR45414.1| ribosomal large subunit pseudouridine synthase B [Parabacteroides
           distasonis ATCC 8503]
 gi|256740063|gb|EEU53387.1| ribosomal large subunit pseudouridine synthase B [Parabacteroides
           sp. D13]
          Length = 495

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 254 ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 304


>gi|153855760|ref|ZP_01996761.1| hypothetical protein DORLON_02779 [Dorea longicatena DSM 13814]
 gi|149751887|gb|EDM61818.1| hypothetical protein DORLON_02779 [Dorea longicatena DSM 13814]
          Length = 236

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 24/199 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKERVKLQNSGEYDEIYIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G       +        L  + +  +     S    N  +  E 
Sbjct: 61  QNI---MNVALDYLACGIDPEKCHIFIQSMVPELTELTFYYMNLVTVSRVQRNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +   +    + F  F Y I QA D               G DQ   I    ++  +  +
Sbjct: 118 QQRNFEASIPVGF--FCYPISQAADITAFR----ATTVPVGEDQMPMIEQCKEIVHKFNS 171

Query: 219 PKLFALTSPLLTTASGTKM 237
                LT P +   S    
Sbjct: 172 VYGETLTEPEIVLPSNKSC 190


>gi|78043829|ref|YP_360766.1| tryptophanyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995944|gb|ABB14843.1| tryptophanyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 326

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 60/350 (17%), Positives = 106/350 (30%), Gaps = 50/350 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GHL  L     LQ+   K   ++    ++         +     + E+ 
Sbjct: 8   GMRPTGR-LHLGHLLVLENWVKLQEEA-KCFYMIADWHAL---------TTEYENTDEVL 56

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NIE +      F+  G     + +          +   L         + R+ +++  +
Sbjct: 57  QNIEYL---ALDFLAAGIDPEKSALFVQSEVKEHAELALLFGMFTPLSWLERVPTYKD-Q 112

Query: 161 SRLKREQSLSFLEF---NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                E       +    Y +LQA D +     Y   L   G DQ  ++    ++  R  
Sbjct: 113 KEKLGEMGKDLNTYGFLGYPLLQAADIL----IYRANLVPVGEDQLPHLELTREVARRFN 168

Query: 218 T--------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                    P+      PLL    G KM K+    I L+   ++P    +  RN+     
Sbjct: 169 YLYGSVFPEPQAVLHAVPLLPGIDGRKMSKSYKNEIALS---STPEEVSEQVRNMITDPA 225

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                R T     E+  +         E      TEI            A    +     
Sbjct: 226 RV---RKTDPGHPEVCVVHTYYQVFYPEK----VTEIEEQCRTAGIGCVACKKQLALKIN 278

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST------NEARRHLK 373
            I    +  +   ++E  +G   L ++ +     S        E R  +K
Sbjct: 279 EI----LEPLRERREEFLKGKKYLEILAEGQAKASRAAKETMREVREKMK 324


>gi|160882401|ref|ZP_02063404.1| hypothetical protein BACOVA_00350 [Bacteroides ovatus ATCC 8483]
 gi|237719072|ref|ZP_04549553.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 2_2_4]
 gi|260171995|ref|ZP_05758407.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. D2]
 gi|293369510|ref|ZP_06616089.1| tryptophan--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|299148155|ref|ZP_07041217.1| tryptophan--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|315920308|ref|ZP_07916548.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156112214|gb|EDO13959.1| hypothetical protein BACOVA_00350 [Bacteroides ovatus ATCC 8483]
 gi|229451451|gb|EEO57242.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 2_2_4]
 gi|292635395|gb|EFF53908.1| tryptophan--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|298512916|gb|EFI36803.1| tryptophan--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|313694183|gb|EFS31018.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 364

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 72/238 (30%), Gaps = 39/238 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQNAGDYSKMFIFIADSQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G   + A +        LC + +  +     S    N  +  E 
Sbjct: 63  QNV---IEVALDYLACGIDPSKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSEI 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   +    ++  R   
Sbjct: 120 QMRNFEASIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMLEQAREIVRRFNY 173

Query: 219 PKLFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                L  P +             T    KM K+L   I+L++    P    +   ++
Sbjct: 174 IYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSE---EPEEIQKKIMSM 228


>gi|307243246|ref|ZP_07525417.1| ribosomal RNA large subunit methyltransferase J [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493374|gb|EFM65356.1| ribosomal RNA large subunit methyltransferase J [Peptostreptococcus
           stomatis DSM 17678]
          Length = 280

 Score = 45.1 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           L+V  GF  S  +ARR + +  + ++N  +      +K         I +  GK
Sbjct: 8   LLVDMGFFPSREQARRTIMAGNVFVDNQRVDKPGTMVK-----DDSEILVK-GK 55


>gi|322694573|gb|EFY86399.1| tryptophanyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 480

 Score = 45.1 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 52/161 (32%), Gaps = 16/161 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD    +     Y G   ++  +H GH+    L  WL      P+ +M     +  D   
Sbjct: 90  LDKHEKKEPFFIYTGRGPSSDIMHIGHMVPFQLAKWLSDVFEVPLIVM-----LTDD--- 141

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            ++       + ++E     +      I  G       + ++  ++    Y ++      
Sbjct: 142 -EKYLMGKMDRTVEEYEHYARENAKDIIAVGFDPDRTFIFSDYEFMGGDFYKNIS----- 195

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              + + ++  +  S      S S  + ++  +QA      
Sbjct: 196 --RIAKRINRGTADSCFGFNSSTSIGKVHFAAVQAASSFAT 234


>gi|212690553|ref|ZP_03298681.1| hypothetical protein BACDOR_00035 [Bacteroides dorei DSM 17855]
 gi|237707991|ref|ZP_04538472.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 9_1_42FAA]
 gi|237725263|ref|ZP_04555744.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. D4]
 gi|265754223|ref|ZP_06089412.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212666902|gb|EEB27474.1| hypothetical protein BACDOR_00035 [Bacteroides dorei DSM 17855]
 gi|229436529|gb|EEO46606.1| tryptophanyl-tRNA synthetase II [Bacteroides dorei 5_1_36/D4]
 gi|229457977|gb|EEO63698.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 9_1_42FAA]
 gi|263234932|gb|EEZ20487.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 364

 Score = 45.1 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLKRRVELQNSGLYDKTFIFIADAQAL---------TDNIENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +    +     K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYMAVGLDPMKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFK----ATTVPVGEDQEPMIEQTREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 176 GDTLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADEVEKKVKSMYT 230


>gi|256086378|ref|XP_002579377.1| tryptophanyl-tRNA synthetase [Schistosoma mansoni]
 gi|238664808|emb|CAZ35616.1| tryptophanyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 411

 Score = 45.1 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 79/250 (31%), Gaps = 32/250 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R F       + +  +  +     Y G   ++ +LH GH+   ++  W Q     P+
Sbjct: 69  LKRRIFFSHRDFEQIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQDVFDIPL 128

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            +              D+ + + ++  I E     +      I  G       + +N  +
Sbjct: 129 VI-----------QLTDDEKFLWKNLSISEVSHLTRENAKDIIAMGFDPKKTFIFSNFEY 177

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA--- 188
           +             +   + R++++   R+      S    + ++  +QA      +   
Sbjct: 178 MG-----TCPDFYRTVCQIQRLVTYNQARAIFGFSDSDCIGKISFPAIQAAPSFAQSFPT 232

Query: 189 --------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKM 237
                   ++  C +     DQ        D+  RL   K   ++++  P L   + TKM
Sbjct: 233 VFENLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLLKPSLIYSVFFPALQG-NQTKM 290

Query: 238 GKTLSGAIWL 247
             +       
Sbjct: 291 SASNPNTSVF 300


>gi|113866544|ref|YP_725033.1| tryptophanyl-tRNA synthetase II [Ralstonia eutropha H16]
 gi|113525320|emb|CAJ91665.1| Tryptophanyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 344

 Score = 45.1 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 54/177 (30%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 19  PTGP-LHLGHYVGSLKSRVTLQDT-HEQYVLLADTQAM---------TDNAHDPDKVRRN 67

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     KT   + ++   L  +  + L     +    N  +  E     
Sbjct: 68  VLEV-ALDYLAVGIDPAKTTITVQSHLPALAELTLMYLNFVTVARLERNPTIKEEIQARG 126

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R+    F    Y   QA D           +   G DQ   I    ++  R+   
Sbjct: 127 FGRDIPAGF--LCYPASQAADITAFK----AHVVPVGEDQAPLIEQTNEIVRRINHQ 177


>gi|262382422|ref|ZP_06075559.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_33B]
 gi|262295300|gb|EEY83231.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_33B]
          Length = 334

 Score = 45.1 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           +                  ++  + +    +   + +  + L   +  AG   S  EA  
Sbjct: 61  YNNNRRPGGGGGFQRSQGYNVRPKQIKYKEV-LADPNEPIRLNKFLSNAGVC-SRREADE 118

Query: 371 HLKSNAIKINNSIISNEKLQIKLQD 395
            ++  A+K+N+ +++    +I  QD
Sbjct: 119 FIQKGAVKVNDVVVTELGTKITRQD 143


>gi|325261537|ref|ZP_08128275.1| tryptophan--tRNA ligase [Clostridium sp. D5]
 gi|324032991|gb|EGB94268.1| tryptophan--tRNA ligase [Clostridium sp. D5]
          Length = 361

 Score = 45.1 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G       ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNAGEFDDIFVMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYLACGLDPAKSTLFIQSQIPELCELSFYYMNLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FTYPISQAADITAFK----ATTVPVGEDQLPMLEQTKEIVRKFNSVY 173

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTS 253
              L  P +             T    KM K+L+  I+L++E  S
Sbjct: 174 GDTLVEPDILLPDNTACLRLPGTDGKAKMSKSLNNCIYLSEEPDS 218


>gi|162147095|ref|YP_001601556.1| ribosomal large subunit pseudouridine synthase B [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209544155|ref|YP_002276384.1| RNA-binding S4 domain-containing protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161785672|emb|CAP55243.1| putative ribosomal large subunit pseudouridine synthase B
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531832|gb|ACI51769.1| RNA-binding S4 domain protein [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 264

 Score = 45.1 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           D   RG  +   + ++G   S  +A R ++   +++N   +++    +   D        
Sbjct: 15  DRPERGERIAKWLARSG-VASRRDAERLVEEGRVRLNGEPVTHPATFVAAGDIVQVNGAV 73

Query: 404 L 404
           +
Sbjct: 74  V 74


>gi|83859466|ref|ZP_00952987.1| RNA pseudouridylate synthase family protein [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852913|gb|EAP90766.1| RNA pseudouridylate synthase family protein [Oceanicaulis
           alexandrii HTCC2633]
          Length = 354

 Score = 45.1 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           E   G  +  ++  AG A S  EA R ++   + +N  I+     ++   D
Sbjct: 12  EEEGGERIAKVLAHAGIA-SRREAERLIEKGRVSVNGEILRTPAFKVMAGD 61


>gi|167551233|ref|ZP_02344988.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205323904|gb|EDZ11743.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 337

 Score = 45.1 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 95/340 (27%), Gaps = 44/340 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------- 216
            R   + F    Y I QA D           +   G DQ   I    ++  ++       
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMNSLFSSP 175

Query: 217 ---KTPKLFALTSPLLTTASGTKMGKTLSGAIW-------LNKEMTSPYNFWQYWRNIDD 266
                  L + T  L       KM K+L   +        +++ +++ Y    + +  D 
Sbjct: 176 VLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSASEETIHRAVSAMYTDPGHLKISDP 235

Query: 267 ADVV--SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
             +        L      +    A     +       +             A      A 
Sbjct: 236 GKIEGNVVFTWLDAFHPDKAKVAAMKVHYQQGGLGDRVCKNELETCLQELIAPIRERRAT 295

Query: 325 ECFDMSIHSQHM--------PTISISKDEVSRGMGLLTLI 356
              D  +  + +             +  EV RG+GL TL 
Sbjct: 296 FIADKGMLMELLKKGSERAHEVTQKTLQEVKRGLGLPTLF 335


>gi|302536383|ref|ZP_07288725.1| tryptophanyl-tRNA synthetase [Streptomyces sp. C]
 gi|302445278|gb|EFL17094.1| tryptophanyl-tRNA synthetase [Streptomyces sp. C]
          Length = 337

 Score = 45.1 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 77/260 (29%), Gaps = 33/260 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +     A  G   T+ S H G+    +     LQ+T H    ++    +I         
Sbjct: 1   MASDRPRALSGIQPTSGSFHLGNYLGAIRQYVALQET-HDAFYMVVDLHAIT-------- 51

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                  ++++ N         +    G       +          +   ++  I  F  
Sbjct: 52  --MPQDPKDLRANTRLSAAQLLAA---GLDPERCTLFVQSHVPEHAQLGWVMNCITGFGE 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S      S S   F Y ILQ  D + L +     +   G DQ  +I   
Sbjct: 107 ASRMTQFKD-KSAKGGVNSASVGLFTYPILQVADIL-LYQANAVPV---GEDQRQHIELT 161

Query: 210 IDLGERLKTPKLFALTSP-----------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER         T P                   KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNQRFGRTFTLPAAHIVKEVAKIYDLQDPAIKMSKSASSPKGLINLLDEPKVTE 221

Query: 259 QYWRN--IDDADVVSFAKRL 276
           +  ++   D   V+ F    
Sbjct: 222 KKIKSAVTDTDTVIRFDTEN 241


>gi|256380457|ref|YP_003104117.1| tryptophanyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255924760|gb|ACU40271.1| tryptophanyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 339

 Score = 45.1 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 66/202 (32%), Gaps = 27/202 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   TA S H G+      L     LQ T H+    +    +I                +
Sbjct: 18  GIQPTAGSFHLGNYLG--ALRQWVALQDT-HEAFYCVVDLHAIT----------VEQDPK 64

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            ++ N           +  G     + +          +   +++ +  F   +RM  F+
Sbjct: 65  VLRANTRVSAAQL---LALGIDPERSALFVQSHVPEHAQLGWVMQCLTGFGEASRMTQFK 121

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
              +R +    +    F Y ILQA D + L + +   +   G DQ  ++    DL +R  
Sbjct: 122 DKSARAESAIGVGL--FTYPILQAADIL-LYQAHHVPV---GEDQRQHLELTRDLAQRFN 175

Query: 218 --TPKLFALTSPLLTTASGTKM 237
               K F L  P +   +    
Sbjct: 176 SRFGKTFRLPEPHIVKDTAKIF 197


>gi|32401310|gb|AAP80827.1| tryptophanyl-tRNA synthetase [Griffithsia japonica]
          Length = 165

 Score = 45.1 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 11  ILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +   RG      +   L D   +      Y G   +++S+H GHL   +   +LQ     
Sbjct: 85  VFLRRGIFFSHRDLNALLDRFEAGTPFYLYTGRGPSSTSMHVGHLIPFIFTAYLQAAFKC 144

Query: 70  PISL 73
           P+ +
Sbjct: 145 PVVI 148


>gi|125560138|gb|EAZ05586.1| hypothetical protein OsI_27802 [Oryza sativa Indica Group]
          Length = 341

 Score = 45.1 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 97/342 (28%), Gaps = 55/342 (16%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           RG   +     EL  L  +  V   Y G++ +   +H          +  +      G K
Sbjct: 44  RGIGEECIQEDELLNLLQKKPVPICYDGFEPSGR-MHIAQGIVKTINVNKMVR---AGCK 99

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    + + +    D          I++     + +   +   G        L + 
Sbjct: 100 VKIWIADWFAQLNNKMGGD----------IKKIQTVGRYMIEIWRAAGMNLDGVEFLWSS 149

Query: 130 TWLCS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +     +Y  L+ +I    +V R++    +  R   ++ L+  +  Y  +Q  D   L
Sbjct: 150 EEINKRANEYWPLVMDIARKNNVKRIMRCCQIMGRNDSDE-LTAAQIFYPCMQCADIFFL 208

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  +   G DQ             LK  + F    P +             G   L
Sbjct: 209 K----ADICQLGMDQ-------RKAQVNLKIKQAFC--PPTIVD-----------GNPCL 244

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
                  + +++ +  +   +        T   M+E+    +       + K  +A  I 
Sbjct: 245 EYIKYIVFPWFETFEVVRKEE---NGGNKTFANMNELIADYESGALHPADVKPALAKAIN 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
            ++                 +  +    +    + K+E S  
Sbjct: 302 QILQP------IRDHFKNNSEAKVLLNTVKNYKVKKEETSSS 337


>gi|71424099|ref|XP_812677.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70877488|gb|EAN90826.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 491

 Score = 44.7 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 25/180 (13%)

Query: 9   LSILSERGFIHQI----SNPRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFW 62
           L     RG +       +    +    + G   AY+  G   +A S+H GH+   +L  +
Sbjct: 143 LRHFFRRGIVFSHRDFGTALDCVRASFATGTHRAYLYTGRGPSAQSMHIGHVIPFLLTRY 202

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK-IKGIFSSFIKYGTGKT 121
           LQ     P+ +       I D    DE           E     +       I +G    
Sbjct: 203 LQDALGLPLVI------QITD----DEKHFFRDIPVSGERASGLVVENIKDIIAFGFDPR 252

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  ++  +          +   V RML+  +V++    + S +  +  +  +QA
Sbjct: 253 KTFIFRNTVYMGDMYP--------TVVQVQRMLTLSAVKNTFGLKDSDNVGKAAFPAVQA 304


>gi|294668247|ref|ZP_06733352.1| hypothetical protein NEIELOOT_00158 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309766|gb|EFE51009.1| hypothetical protein NEIELOOT_00158 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 398

 Score = 44.7 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 75/277 (27%), Gaps = 32/277 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II     +     M+           + 
Sbjct: 66  HLGNYVGAIRPAVRAAQTPDTESFLFLADYHGII-----KCHEPEMIHQSTQAVAATWLA 120

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W+ +      L      +      + ES  ++   + 
Sbjct: 121 CGLDPERTTFYRQSDIPEVMELNWILTCITAKGLMNRAHAYKAAVQANAES--NQEDPDH 178

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    ++Y IL   D +      +      G DQ  ++    D+  R         T P
Sbjct: 179 GVEMGLYSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFNHRFKEVFTLP 234

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW----------RNIDDAD 268
                    LL    G KM K+    I L +                      +  D++ 
Sbjct: 235 EVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESP 294

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +    K  +T   +        +G    EAKK  + +
Sbjct: 295 LFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKTPSRQ 331


>gi|239816995|ref|YP_002945905.1| tryptophanyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239803572|gb|ACS20639.1| tryptophanyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 443

 Score = 44.7 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/228 (11%), Positives = 64/228 (28%), Gaps = 24/228 (10%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
            +    G   + +  H G+    +   +      G +    +    ++I     + +   
Sbjct: 8   PLRVLTGITPSGTP-HLGNYVGSIRHSVRQSVAPGVESFFFLADYHALI-----KVQEPA 61

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +++   ++     +             ++D + +   TW  +      +      +    
Sbjct: 62  LIQRSTLEIAASWLACGLDPERVTFYRQSDIVEITELTWFLTCVTGKGVLNRAHAYKAQL 121

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
             +   +      +  ++   F Y +L   D +      +      G DQ  +I    D+
Sbjct: 122 DKN---IAKGEDPDADVTAGLFMYPVLMGADILMF----NAHKVPVGRDQVQHIEMARDM 174

Query: 213 GERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEM 251
            +R         T P          L    G KM K+    I +    
Sbjct: 175 AQRFNHQYGEHFTLPEAEIDDAVATLPGLDGRKMSKSYGNTIAMFAPR 222


>gi|194445132|ref|YP_002043750.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194403795|gb|ACF64017.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 95/340 (27%), Gaps = 44/340 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------- 216
            R   + F    Y I QA D           +   G DQ   I    ++  ++       
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMNSLFSSP 175

Query: 217 ---KTPKLFALTSPLLTTASGTKMGKTLSGAIW-------LNKEMTSPYNFWQYWRNIDD 266
                  L + T  L       KM K+L   +        +++ +++ Y    + +  D 
Sbjct: 176 VLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSASEETIHRAVSAMYTDPGHLKISDP 235

Query: 267 ADVV--SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
             +        L      +    A     +       +             A      A 
Sbjct: 236 GKIEGNVVFTWLDAFHPDKAKVAAMKAHYQQGGLGDRVCKNELETCLQELIAPIRERRAT 295

Query: 325 ECFDMSIHSQHM--------PTISISKDEVSRGMGLLTLI 356
              D  +  + +             +  EV RG+GL TL 
Sbjct: 296 FIADKGMLMELLKKGSERAHEVTQKTLQEVKRGLGLPTLF 335


>gi|261199638|ref|XP_002626220.1| tryptophanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594428|gb|EEQ77009.1| tryptophanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 437

 Score = 44.7 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|289811391|ref|ZP_06542020.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 46

 Score = 44.7 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 30/46 (65%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           DF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL
Sbjct: 1   DFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPL 46


>gi|72392513|ref|XP_847057.1| tryptophanyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62358995|gb|AAX79445.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70803087|gb|AAZ12991.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 473

 Score = 44.7 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 76/249 (30%), Gaps = 23/249 (9%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            +      G   AY+  G   +  ++H GH+   ML  +LQ     P+ +       I D
Sbjct: 143 NVQEALRSGTQGAYLYTGRGPSTRTMHLGHVIPFMLTRYLQDALGLPLVI------QITD 196

Query: 84  ---PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK---- 136
                FRD     +      + I+ +       I +G       +  N +++ S+     
Sbjct: 197 DEKFFFRDV---PLHDNRCSDGIDIVTENIKDIIAFGFDPKRTFIFRNTSYMGSMYPTVV 253

Query: 137 -YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                +       ++  + +    ++     Q+      ++  +      +  K   C +
Sbjct: 254 RLQRTMTLSAVKNTLGLIDNDNIGKASFAATQAAPCFSSSFPCILG--EQDFEKPLQCIV 311

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG-KTLSGAIWLNKEMTSP 254
                DQ    +       R+K      L +  L    G ++   + +    +     SP
Sbjct: 312 PC-AIDQDPYFVLARASASRMKYRAPALLHTKFLPALKGMRLKMSSSAEESGVITLHDSP 370

Query: 255 YNFWQYWRN 263
               +  + 
Sbjct: 371 EQVQKKMKK 379


>gi|325282847|ref|YP_004255388.1| tryptophanyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314656|gb|ADY25771.1| tryptophanyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 347

 Score = 44.7 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 59/222 (26%), Gaps = 30/222 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ T +    L+    ++  +     + R  +    +   
Sbjct: 22  PTGP-LHIGHYAGSLKNRVRLQ-TEYDTFILIADVQAMTDNFENPQKVRDNVLQVALDYL 79

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              +    S+F+        A           +    L     S    N  +  E  +  
Sbjct: 80  AVGLDPQHSTFVVQSMIPEIA----------ELTVFYLNLVTVSHLRQNPTVKTEIAQKG 129

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPK 220
                   F  F Y + QA D           L   G DQ   I    ++  R       
Sbjct: 130 YGESVPAGF--FVYPVSQAADITAFQ----ASLVPVGEDQLPMIEQTREIVRRFNNLYAP 183

Query: 221 LFALTSPLLTT---------ASGTKMGKTLSGAIWLNKEMTS 253
           +      ++               KM K+L  A++L      
Sbjct: 184 VLVEPQAMVPKGTVARLPGIDGQAKMSKSLGNAVYLGDSADE 225


>gi|225557490|gb|EEH05776.1| transfer RNA-Trp synthetase [Ajellomyces capsulatus G186AR]
          Length = 459

 Score = 44.7 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|87199318|ref|YP_496575.1| pseudouridine synthase, Rsu [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134999|gb|ABD25741.1| Pseudouridine synthase, Rsu [Novosphingobium aromaticivorans DSM
           12444]
          Length = 270

 Score = 44.7 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            G  +  L+ +AG A S  E  R ++   +KI + +++     + 
Sbjct: 27  EGDRIAKLLARAGIA-SRREVERMIEEGRVKIGDEVVTTPATLLT 70


>gi|82705186|ref|XP_726865.1| tryptophanyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482449|gb|EAA18430.1| tryptophanyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 687

 Score = 44.7 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 64/220 (29%), Gaps = 14/220 (6%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              R       +    L+          Y G   ++ S+H GHL       +LQ   + P
Sbjct: 315 FIRRNIFFSHRDLDFLLNYYEKNKSFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVP 374

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       I D    DE     ++  +    +  K      I  G       +  N  
Sbjct: 375 LII------QISD----DEKFLFNKNYSLDYINKLSKENVKDIIAVGLNPELTFIFKNTQ 424

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           ++ +    + +  I    ++N+ ++             +S+  F      +  F      
Sbjct: 425 YVHN--LYNTVLSIHKKTTLNQSMNIFGF-DHSDNIGKISYPSFQIAPCFSQCFPNFLPQ 481

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
               L   G DQ        D+  +L   K   + S  + 
Sbjct: 482 NLPCLVPQGIDQDPYFRLSRDIAVKLALHKPVVIHSIFMP 521


>gi|256824646|ref|YP_003148606.1| tryptophanyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688039|gb|ACV05841.1| tryptophanyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 331

 Score = 44.7 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 22/181 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T+ SLH G+    +   W  +Q  GH+ +  +    +             +    +
Sbjct: 4   GMQPTSDSLHLGNYLGALS-QWGPMQD-GHEALFCVVDLHA-------------VTLPMD 48

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +   ++ +   + F+  G     + +          +   LL  I  F   +RM  F+ 
Sbjct: 49  PELLRQRTRRTAAQFMAGGVDPERSALFVQSHVPEHAELAWLLNCITGFGEASRMTQFKD 108

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            ++  +   + S   F Y +L A D +     YD  L   G DQ  ++    DL +R   
Sbjct: 109 -KAARQEAGNASVGLFTYPMLMAADIL----LYDTALVPVGEDQVQHVELTRDLAQRFNH 163

Query: 219 P 219
            
Sbjct: 164 R 164


>gi|302343457|ref|YP_003807986.1| tryptophanyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640070|gb|ADK85392.1| tryptophanyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 321

 Score = 44.7 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 92/346 (26%), Gaps = 62/346 (17%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQ 97
           G   + + LH G+   +M  +   Q   H     +    ++  +G+P   D+ R+   + 
Sbjct: 6   GVQPSGT-LHIGNYFAMMKRMIQYQNE-HTLFCFIVNYHALTTVGEP---DKLRQGALNA 60

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            +                Y   ++D   +   TW+           +     V  +    
Sbjct: 61  AMDFLALG----LDPAKCYFWMQSDIPEVCELTWI-----------LFQQTPVGLLERAH 105

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL- 216
           S + +L +  S     FNY +L A D +             G DQ  +I    D+  +  
Sbjct: 106 SYKDKLAKGFSPQAGLFNYPVLMAADILMFQ----SEAVPVGKDQKQHIEITRDIAIKFN 161

Query: 217 -KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
            +  ++F L  P +   + T  G                +   +  R    + V      
Sbjct: 162 NQYGEVFTLPEPWIDDDTATVPGIDGQKMSKSYDNTLEIFLPEKQLRKKIMSIVTDSTPV 221

Query: 276 LTTLPMSEIDRMA-----KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                  + +            +    A++  A  +      +E  E+         D  
Sbjct: 222 EAPKDPEKCNVYKLISLFMTAAEREELAQRYRAGGLGYGQVKKELFERMWAYFAPYRDKR 281

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
                 P                             E RR +   A
Sbjct: 282 AALAADPE----------------------------EVRRIMAQGA 299


>gi|240278128|gb|EER41635.1| tryptophanyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325096190|gb|EGC49500.1| tryptophanyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 458

 Score = 44.7 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|239615600|gb|EEQ92587.1| tryptophanyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 460

 Score = 44.7 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|327354223|gb|EGE83080.1| tryptophanyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 460

 Score = 44.7 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|307330674|ref|ZP_07609812.1| tryptophanyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306883653|gb|EFN14701.1| tryptophanyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 72/235 (30%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ+T H     +    +I                 E+
Sbjct: 11  GIQPTAGSFHLGNYLGAIRQYVALQET-HDAFYTVVDLHAIT----------VPQDPAEL 59

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N           +  G       +          +   ++  +  F   +RM  F+  
Sbjct: 60  RANSRLAAAQL---LASGLDPDRCTLFIQSHVPEHAQLGWVMNCLTGFGEASRMTQFKD- 115

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +S        +   F Y ILQ  D + L +     +   G DQ  +I    DL +R    
Sbjct: 116 KSARHGADRATVGLFTYPILQVADIL-LYQANHVPV---GEDQRQHIELTRDLADRFNGR 171

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +    +   +G          KM K+ S    +   +  P    +  ++
Sbjct: 172 FGETFTVPEAYIVKETGKIYDLQDPTIKMSKSASTPKGIVSLLDEPKVSAKKIKS 226


>gi|89070784|ref|ZP_01158037.1| RNA pseudouridylate synthase family protein [Oceanicola granulosus
           HTCC2516]
 gi|89043626|gb|EAR49833.1| RNA pseudouridylate synthase family protein [Oceanicola granulosus
           HTCC2516]
          Length = 279

 Score = 44.7 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +   G  +  ++ + G   S  EA R +++  + +N  +I +  L +   D  
Sbjct: 2   SDEHAGERIAKILSRRG-VASRREAERMIEAGRVSVNGRLIDSPALNVTTSDRI 54


>gi|188591259|ref|YP_001795859.1| tryptophanyl-tRNA synthetase ii [Cupriavidus taiwanensis LMG 19424]
 gi|170938153|emb|CAP63139.1| Tryptophanyl-tRNA synthetase(Tryptophan--tRNA ligase) (TrpRS)
           [Cupriavidus taiwanensis LMG 19424]
          Length = 345

 Score = 44.7 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 35/218 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ + H+   L+    ++         +       +++ N
Sbjct: 20  PTGP-LHLGHFVGSLKSRVALQDS-HEQYLLLADTQAM---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     KT   + ++   L  +  + L     +    N  +  E     
Sbjct: 69  VLEV-ALDYLAVGIDPAKTTITVQSHLPALAELTLMYLNFVTVARLERNPTIKEEIQARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICGI 210
             R+    F    Y   QA D       +   +   G DQ              N   G 
Sbjct: 128 FGRDIPAGF--LCYPASQAADIT----GFKAEVVPVGEDQAPLIEQTNEIVRRINHQVGR 181

Query: 211 DLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           D+    K     F     +       KM K++  AI L
Sbjct: 182 DVLPECKAMIPQFGRLPGV---DGKAKMSKSMGNAIAL 216


>gi|297622733|ref|YP_003704167.1| RNA-binding S4 domain-containing protein [Truepera radiovictrix DSM
           17093]
 gi|297163913|gb|ADI13624.1| RNA-binding S4 domain protein [Truepera radiovictrix DSM 17093]
          Length = 83

 Score = 44.7 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 29/62 (46%)

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            + P  +   D+    + L   +  +G A +  +A+  ++S  +++N  + +  K +++ 
Sbjct: 1   MNRPPDTDRFDDPEPTITLNDALKLSGLAQTGGQAKLMIQSGRVRVNGEVETRRKRKLRE 60

Query: 394 QD 395
            D
Sbjct: 61  GD 62


>gi|310779341|ref|YP_003967674.1| tryptophanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748664|gb|ADO83326.1| tryptophanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 327

 Score = 44.7 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/335 (10%), Positives = 96/335 (28%), Gaps = 33/335 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +  F   +  ++    +    S+   P  +             
Sbjct: 7   GIQPSG-VLHLGNYFGAIKQFIENQDKYEGFYFIADYHSLTSSPDPKSL----------- 54

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E    I   ++  G     A +          ++ +L   + +   +  +    S +
Sbjct: 55  --RENSYNIVLDYLALGLDPEKATIFLQSD---MPEHAELAWILSNVTPMGLLERAHSFK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---K 217
            +  +  + +   F Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKTAKGIAANAGLFTYPVLMAADIL----MYDPDIVPVGKDQKQHLEMTRDIAMKFNLQY 165

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             ++F L  P +  +     G                +   +  +    + V        
Sbjct: 166 EKEIFKLPEPGILESLAVVPGTDGQKMSKSYGNTIEMFASKKNLKKQIMSVV-------- 217

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
               + ++             K   + E    +  +  A        +   +    ++  
Sbjct: 218 -TDSTPLEDPKDPDNNITILYKLFASEEKVEEMRQKFMAGGYGYGHAKNELLEAVLEYFK 276

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                ++E+++    +  ++K G   +   A + +
Sbjct: 277 EAREKREELAKNPEYVEAVLKKGAEKARKIAHKKI 311


>gi|302039244|ref|YP_003799566.1| putative pseudouridine synthase [Candidatus Nitrospira defluvii]
 gi|300607308|emb|CBK43641.1| putative Pseudouridine synthase [Candidatus Nitrospira defluvii]
          Length = 236

 Score = 44.7 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 6/68 (8%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M +     + G   S  EA R +    + IN   ++    Q+  QD  +   + L  G +
Sbjct: 1   MRINKFFTEQGLC-SRREADRLIAEGRVTING-RVAKLGDQVSPQDAVARDGVVLQRGNR 58

Query: 410 ----NHII 413
                +  
Sbjct: 59  AVYLKYHK 66


>gi|29840716|ref|NP_829822.1| tryptophanyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301680|sp|Q821H9|SYW_CHLCV RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|29835066|gb|AAP05700.1| tryptophanyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 345

 Score = 44.7 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 48/352 (13%), Positives = 103/352 (29%), Gaps = 47/352 (13%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH    +     LQ    +    ++    ++         +
Sbjct: 2   NKKKRVLTGDRPTGK-LHLGHWVGSIKNRLDLQNNPAYDCFFIIADLHTL--------TT 52

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R         +N   I  + + ++  G     + +          +  +L        SV
Sbjct: 53  RVRKEQVVDVDN--HIYEVLADWLSVGIDPNKSSIYLQSAI---PEIYELHLLFSMLISV 107

Query: 151 NRMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           NR++      E  ++    E  LS     Y +LQ+ D +        +L   G D   +I
Sbjct: 108 NRIMGIPSLKEMAKNASIEEGGLSLGLMGYPVLQSADIL----LAKAQLVPVGKDNEAHI 163

Query: 207 ICGIDLGE---------RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
               D+             +   L    + L+      KM K+ + AI+L+ +  +  + 
Sbjct: 164 ELTRDIARNFNRLYGEIFPEPETLQGELTSLVGIDGQGKMSKSANNAIYLSDDDATIEDK 223

Query: 258 WQYWR------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
            +                ++   +  +            +   + +   I   E K  +A
Sbjct: 224 VRRMYTDPNRIHASTPGRVEGNPLFIYHDIFNPNKEEVEEFKTRYRQGCIKDVEIKTRLA 283

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+   +    E      A  +    ++        +++K+ +      L L
Sbjct: 284 EELIRFLQPFREKRAELLAHPKILQEALQKGTENMCALAKETMEEVHNTLEL 335


>gi|237731360|ref|ZP_04561841.1| tryptophanyl-tRNA synthetase II [Citrobacter sp. 30_2]
 gi|226906899|gb|EEH92817.1| tryptophanyl-tRNA synthetase II [Citrobacter sp. 30_2]
          Length = 334

 Score = 44.7 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 84/313 (26%), Gaps = 38/313 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  ++   L+     +         +      Q+I+ NI
Sbjct: 13  PTGP-LHLGHYVGSLRQRATLQHDYQQFILVADLQGL---------TDNGSTPQKIRNNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++              T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PEVLA-DYLAAGIDPSLTTICLQSALPALAELTALYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------- 216
            R   + F    Y I QA D           +   G DQ   I    ++  ++       
Sbjct: 122 ARSLPVGF--LVYPISQAADITAFK----AEVVPVGDDQLPMIEQTNEIVHKMNSLLPAP 175

Query: 217 ---KTPKLFALTSPLLTTASGTKMGKTLSGAIW-------LNKEMTSPYNFWQYWRNIDD 266
                  L + TS L       KM K+L   +        +++ +++ Y    + +  D 
Sbjct: 176 VLSHCKALLSETSRLPGIDGNAKMSKSLGNTLLLSASEETIHRAVSAMYTDPNHLKVSDQ 235

Query: 267 ADV---VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
             +   + F       P        K   ++              +      A      A
Sbjct: 236 GQIDGNMVFTYLDAFHPDKAKVAEMKAHYQQGGLG-DRTCKNELEVCLQELIAPMRERRA 294

Query: 324 MECFDMSIHSQHM 336
               D  +    +
Sbjct: 295 TYIQDKGMLMAML 307


>gi|238910671|ref|ZP_04654508.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|289825453|ref|ZP_06544684.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 297

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|169840788|ref|ZP_02873901.1| hypothetical protein cdivTM_26801 [candidate division TM7
           single-cell isolate TM7a]
          Length = 40

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +   + I   +I + K     +DF   G + +  GKK
Sbjct: 1   EQGGVSIEGEVIKDVKKTFTKEDFAGEG-LLIKRGKK 36


>gi|168464591|ref|ZP_02698494.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195632751|gb|EDX51205.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|168262447|ref|ZP_02684420.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205348849|gb|EDZ35480.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|168243998|ref|ZP_02668930.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194449833|ref|YP_002048529.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194408137|gb|ACF68356.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205336971|gb|EDZ23735.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|168234639|ref|ZP_02659697.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168821044|ref|ZP_02833044.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194736192|ref|YP_002117426.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|204927177|ref|ZP_03218379.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|194711694|gb|ACF90915.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197291920|gb|EDY31270.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204323842|gb|EDZ09037.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205342314|gb|EDZ29078.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320084593|emb|CBY94384.1| putative tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|161617807|ref|YP_001591772.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168232858|ref|ZP_02657916.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468762|ref|ZP_03074746.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197261768|ref|ZP_03161842.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|161367171|gb|ABX70939.1| hypothetical protein SPAB_05671 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194455126|gb|EDX43965.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197240023|gb|EDY22643.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205332936|gb|EDZ19700.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|62182933|ref|YP_219350.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224586333|ref|YP_002640132.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|62130566|gb|AAX68269.1| putative tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224470861|gb|ACN48691.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|16763315|ref|NP_458932.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29144793|ref|NP_808135.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213162282|ref|ZP_03347992.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213428373|ref|ZP_03361123.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213619384|ref|ZP_03373210.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648411|ref|ZP_03378464.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|25292926|pir||AI1066 tryptophan-tRNA ligase (EC 6.1.1.2) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16505624|emb|CAD03352.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29140432|gb|AAO71995.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|240273798|gb|EER37317.1| NAM9+ protein [Ajellomyces capsulatus H143]
 gi|325094771|gb|EGC48081.1| NAM9+ protein [Ajellomyces capsulatus H88]
          Length = 490

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 2/116 (1%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  +   +       E A   +         +   P + 
Sbjct: 58  HGEQVRESQWEKMFSRRLRSVVPMDANYLARNDGSFESAGRGSGLEGVGPRRAPLTPHMQ 117

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +      +   D 
Sbjct: 118 MTFAPLERRLDV--AIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNPGDL 171


>gi|225555459|gb|EEH03751.1| NAM9+ protein [Ajellomyces capsulatus G186AR]
          Length = 490

 Score = 44.7 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 2/116 (1%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  +   +       E A   +         +   P + 
Sbjct: 58  HGEQVRESQWEKMFSRRLRSVVPMDANYLARNDGSFESAGRGSGLEGVGPRRAPLTPHMQ 117

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +      +   D 
Sbjct: 118 MTFAPLERRLDV--AIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNPGDL 171


>gi|300172637|ref|YP_003771802.1| tryptophanyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887015|emb|CBL90983.1| Tryptophanyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 338

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 52/178 (29%), Gaps = 19/178 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G   P  ++    +      F D +R   +  +   
Sbjct: 12  PTGK-LHIGHYIGSLKNRVQMQNSGQFDPFVMIADTQA------FTDNARNPEKIHQALT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +         ++  G       +          +  +    + S   + R  + +S  S
Sbjct: 65  EVALD------YLAVGIDPKKTTIFVQSQIKGLFELTEYFMNLVSVARLQRNPTVKSEIS 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +    + +      Y + QA D   + +     +   G DQ   +    +L       
Sbjct: 119 QKGFGEGIPAGFLTYPVSQAADI-AIFRATKVPV---GDDQEPMLEQTRELVRSFNHA 172


>gi|284048605|ref|YP_003398944.1| tryptophanyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952826|gb|ADB47629.1| tryptophanyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 353

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 60/199 (30%), Gaps = 24/199 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTG-HLHVGHFVGSLQERVLLQNSGKFDEIYFMIADAQAL---------TDNAENPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G     A +        L  +    +     +    N  +  E 
Sbjct: 61  QNV---LQVALDYLAVGIDPQKATIFIQSLIPELFELSTYYMDLVTVARVQRNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +   +    L F  F Y + QA D       +       G DQ   +    ++  +  +
Sbjct: 118 QQKNFEASVPLGF--FCYPVSQAADITAFHATH----VPVGEDQKPMLEQCREIVHKFNS 171

Query: 219 PKLFALTSPLLTTASGTKM 237
                LT P +   S    
Sbjct: 172 VYGETLTEPDIVLPSNKAC 190


>gi|266622364|ref|ZP_06115299.1| tryptophan--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865916|gb|EFC98214.1| tryptophan--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 364

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 59/197 (29%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGK-LHIGHYVGSLKRRVELQNSGEFDEIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     +    N  +  E   
Sbjct: 61  QNIIEV-ALDYLSCGLDPAKSTLFIQSQIPELTELSFYYMNLVTVARLQRNPTVKSEIAM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FTYPISQAADITAFK----ATTVPVGEDQEPMIEQTREIVRKFNSVY 173

Query: 221 LFALTSPLLTTASGTKM 237
             AL  P +        
Sbjct: 174 GEALVEPDILLPDNKAC 190


>gi|198242791|ref|YP_002218378.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205355234|ref|YP_002229035.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207859634|ref|YP_002246285.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|197937307|gb|ACH74640.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205275015|emb|CAR40099.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206711437|emb|CAR35821.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326626186|gb|EGE32531.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326630396|gb|EGE36739.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 337

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPTLTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|16767752|ref|NP_463367.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167991301|ref|ZP_02572400.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|200388639|ref|ZP_03215251.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|16423074|gb|AAL23326.1| putative tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|199605737|gb|EDZ04282.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205330387|gb|EDZ17151.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261249594|emb|CBG27463.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996858|gb|ACY91743.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160990|emb|CBW20526.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915605|dbj|BAJ39579.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321222521|gb|EFX47593.1| Tryptophanyl-tRNA synthetase ; type 2 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323132847|gb|ADX20277.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332991317|gb|AEF10300.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 337

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL---------TDNGSNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PQVLA-DYLAVGIDPTLTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|323705457|ref|ZP_08117032.1| tryptophanyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535359|gb|EGB25135.1| tryptophanyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 327

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 46/345 (13%), Positives = 102/345 (29%), Gaps = 53/345 (15%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRM 93
              + G   T   +H G+    M      K    +  +  +    ++             
Sbjct: 2   QRVFSGVQPTGD-IHIGNYLGAMK--QFVKLQDDYSCLFCIVDLHAL------------- 45

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
              Q+ +   +K   +   ++  G      ++          +   LL+ +  F  +NRM
Sbjct: 46  TVPQDPETLRKKSIELAGLYLAIGLDPKKVIIFVQSHVKEHSELAWLLQCMTYFGELNRM 105

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + + K ++S+S   F Y  L A D +     YD      G+DQ  ++    D+ 
Sbjct: 106 TQ---FKEKSKGKESVSVGLFTYPDLMAADIL----LYDTNFVPVGNDQKQHLELTRDIA 158

Query: 214 ERLK--TPKLFALTSPLLTTAS---------GTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            R        F +  P++               KM K+          +  P    +   
Sbjct: 159 IRFNNRFGDTFVIPEPMILKTGSRIMSLTEPDKKMSKSSENQYSKINLLDEPSLVKKKIM 218

Query: 263 N--IDDADVVSF--------------AKRLTTLPMSEIDRMAKLQGKEI-NEAKKIIATE 305
               D  +V+ +                  T + + +++   K QG     +    +  E
Sbjct: 219 KAVTDSENVIRYDPENKPGLSNLLTLYSAFTDISIEDVEARFKGQGYGTLKKELVDVIVE 278

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
               +        +        D +  +  +   +++K +   G+
Sbjct: 279 RLQEIQSNYRNLDSNFINEVLKDGAEKASEIAKATVNKVKDKMGL 323


>gi|325962566|ref|YP_004240472.1| tryptophanyl-tRNA synthetase [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468653|gb|ADX72338.1| tryptophanyl-tRNA synthetase [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 342

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 23/232 (9%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                 G   TA SLH G+    +     +Q   +  +  +    +I  D          
Sbjct: 5   KKRILSGAKPTADSLHLGNYIGAVRNWVDMQ-AEYDAVFFIPDLHAITVD---------- 53

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
               +  E  ++ + + + +I  G     ++           +    L  I  F   +RM
Sbjct: 54  ---FDPAELAKRTRIVAAQYIAAGIDPDKSIFFVQSHVPEHAQLAWALNCITGFGEASRM 110

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+  +++     + +   F Y  L A D +     Y   L   G DQ  ++    +L 
Sbjct: 111 TQFKD-KTQKSGADAATLGLFAYPTLMAADIL----LYQTDLVPVGEDQRQHLELTRNLA 165

Query: 214 ERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +R        F +    +   S          A  ++K   SP    Q   +
Sbjct: 166 QRFNTRFGPTFTVPEATIVKESAKIYDLQNPSAK-MSKTGESPNGAIQLLED 216


>gi|255323936|ref|ZP_05365062.1| tryptophan-tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|311739950|ref|ZP_07713784.1| tryptophan--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255299116|gb|EET78407.1| tryptophan-tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|311305023|gb|EFQ81092.1| tryptophan--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 341

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 74/235 (31%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ  G+     +    +I                +E+
Sbjct: 14  GIQPTADSYHLGNYLGALKQWIDLQD-GYDAFYFIPDLHAIT----------VEQNPEEL 62

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +             I  G     + +          +   +L+ +  F   +RM  F+  
Sbjct: 63  RNRTIAGAAQL---IALGIDPEKSTLFVQSHVPAHAELTWVLQCLTGFGEASRMTQFKD- 118

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +S  +     S   F Y IL A D + L       +   G DQ  ++    +L ER    
Sbjct: 119 KSAKQGSDRTSVGLFTYPILMASDIL-LYSPDYVPV---GEDQRQHLELTRNLAERFNNK 174

Query: 220 --KLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +  P +   +           KM K+ +    L   + +P    +  ++
Sbjct: 175 YGETFKVPEPFIPEGAAKIYDLQEPTSKMSKSGANPKGLVNLLDAPKTSAKRIKS 229


>gi|289064347|gb|ADC80549.1| tryptophan aminoacyl-tRNA synthetase [Toxoplasma gondii]
          Length = 689

 Score = 44.4 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 13/232 (5%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S      Y G   ++ +LH GHL   M   +LQ     P+ +       + D    DE 
Sbjct: 369 LSGPGFYLYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVI------QLTD----DEK 418

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                S  ++E            I  G       +              ++ EI    + 
Sbjct: 419 FLFKDSLTLEETHRLAFENAKDIIACGFDPDKTFIF--SDLSYIQHLYPVILEIQKKVTY 476

Query: 151 NRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           N++   F  V S    + +   ++       A+  +   K     L     DQ       
Sbjct: 477 NQVRGLFGFVESDNVGKSAFPAVQAAPSFPTAFPMIFGGKKDVRCLIPQAIDQDPYFRMT 536

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            D+  RL   K   + S  +    G K   + S          +P       
Sbjct: 537 RDVAPRLGLLKPALIHSRFIPALQGFKTKMSGSVETSSIYVSDTPEQIKNKI 588


>gi|221484460|gb|EEE22756.1| tryptophanyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221505571|gb|EEE31216.1| tryptophanyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 689

 Score = 44.4 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 13/232 (5%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S      Y G   ++ +LH GHL   M   +LQ     P+ +       + D    DE 
Sbjct: 369 LSGPGFYLYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVI------QLTD----DEK 418

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                S  ++E            I  G       +              ++ EI    + 
Sbjct: 419 FLFKDSLTLEETHRLAFENAKDIIACGFDPDKTFIF--SDLSYIQHLYPVILEIQKKVTY 476

Query: 151 NRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           N++   F  V S    + +   ++       A+  +   K     L     DQ       
Sbjct: 477 NQVRGLFGFVESDNVGKSAFPAVQAAPSFPTAFPMIFGGKKDVRCLIPQAIDQDPYFRMT 536

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            D+  RL   K   + S  +    G K   + S          +P       
Sbjct: 537 RDVAPRLGLLKPALIHSRFIPALQGFKTKMSGSVETSSIYVSDTPEQIKNKI 588


>gi|237837957|ref|XP_002368276.1| tryptophanyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965940|gb|EEB01136.1| tryptophanyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 606

 Score = 44.4 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 13/232 (5%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S      Y G   ++ +LH GHL   M   +LQ     P+ +       + D    DE 
Sbjct: 286 LSGPGFYLYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVI------QLTD----DEK 335

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                S  ++E            I  G       +              ++ EI    + 
Sbjct: 336 FLFKDSLTLEETHRLAFENAKDIIACGFDPDKTFIF--SDLSYIQHLYPVILEIQKKVTY 393

Query: 151 NRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           N++   F  V S    + +   ++       A+  +   K     L     DQ       
Sbjct: 394 NQVRGLFGFVESDNVGKSAFPAVQAAPSFPTAFPMIFGGKKDVRCLIPQAIDQDPYFRMT 453

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            D+  RL   K   + S  +    G K   + S          +P       
Sbjct: 454 RDVAPRLGLLKPALIHSRFIPALQGFKTKMSGSVETSSIYVSDTPEQIKNKI 505


>gi|218437902|ref|YP_002376231.1| hemolysin A [Cyanothece sp. PCC 7424]
 gi|218170630|gb|ACK69363.1| hemolysin A [Cyanothece sp. PCC 7424]
          Length = 270

 Score = 44.4 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 8/73 (10%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL--QDFDSTGNIKLSFG---- 407
            L+V     +S   A+R +++  +++N  II     ++    +       + +S G    
Sbjct: 8   NLLVTLNLCSSRQLAQRLIRAGEVRVNQQIIDKPGTEVDPGAEIQLQAKPLYVSRGGEKL 67

Query: 408 KK--NHIICHLCG 418
           KK        + G
Sbjct: 68  KKAIEFFKIPVEG 80


>gi|320100394|ref|YP_004175986.1| tryptophanyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752746|gb|ADV64504.1| tryptophanyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 368

 Score = 44.4 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 60/198 (30%), Gaps = 30/198 (15%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD L     V    G+  +    H G       L +LQ  G     ++    + I     
Sbjct: 57  LDALKHGEKVAVLTGFMPSGRP-HLGTAMVYEELRFLQSLGAHVKIVIADAEAYI----V 111

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           R E R  +        +++     +  I +G     A            +Y  L++    
Sbjct: 112 RREERSDV--------VKRGVDFIAHAIAWGIDPEKAEFYYQT--AMDNEYYRLIQMFSR 161

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-----KNYDCRLQMGGSD 201
             S+  M +             L+  +    + QA D + L            + +G  D
Sbjct: 162 KISMAEMEA---------IYGELTPGKIVASLTQAADILHLQLDKYGGYRHVVVPVGA-D 211

Query: 202 QWGNIICGIDLGERLKTP 219
           Q  ++    DL +R +  
Sbjct: 212 QDPHLRLTRDLADRFEQE 229


>gi|110668729|ref|YP_658540.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
 gi|109626476|emb|CAJ52937.1| ribosomal protein S4.eR [Haloquadratum walsbyi DSM 16790]
          Length = 265

 Score = 44.4 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G+ L+ L+    G+A S  EAR  L   ++ +N  ++S+E+  + L D  
Sbjct: 34  ESGVPLVILLRDVLGYADSKKEARYALNQRSVLVNGDVVSDEQRPVGLFDIL 85


>gi|295396426|ref|ZP_06806588.1| tryptophan--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970728|gb|EFG46641.1| tryptophan--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 337

 Score = 44.4 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 74/248 (29%), Gaps = 39/248 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWL--QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T+ SLH G+      L     Q+  H     +    +             +   Q 
Sbjct: 17  GVQATSGSLHLGNYIG--ALQQFVAQQETHDAFFFIANMHA-------------ITVEQN 61

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRMLSFE 157
            +E  E+     + FI  G     + +         +     L  I    + +       
Sbjct: 62  PEELRERTLRTAAQFIAAGLDPEKSTIFVQS----HVDAHTKLSWILECTTSLGEAQRMT 117

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             + +  + + +S     Y  L A D +     Y   +   G DQ  ++    +L ER  
Sbjct: 118 QFKDKSAKNEHVSLGLLTYPALMAADIL----LYQADVVPVGEDQRQHLELTRNLAERFN 173

Query: 218 --TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN--I 264
               + F +    +   +           KM K+          +  P    + +++   
Sbjct: 174 NRYGETFKVPEAGILKQTAKIYDLQDPSAKMSKSGKNPAGRIDILDEPKVLQKKFKSAVT 233

Query: 265 DDADVVSF 272
           D+  V+++
Sbjct: 234 DNDTVIAY 241


>gi|254474349|ref|ZP_05087735.1| pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Ruegeria sp. R11]
 gi|214028592|gb|EEB69427.1| pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Ruegeria sp. R11]
          Length = 414

 Score = 44.4 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             G  +  ++ +AG A S  EA R +    +++N  +I +  L +
Sbjct: 42  PDGDRIAKVLSRAGLA-SRREAERMIADGRVEVNGKVIDSPALNV 85


>gi|169630762|ref|YP_001704411.1| tryptophanyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169242729|emb|CAM63757.1| Tryptophanyl-tRNA synthetase (TrpS) [Mycobacterium abscessus]
          Length = 340

 Score = 44.4 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 76/242 (31%), Gaps = 37/242 (15%)

Query: 37  TAYIGYDLTASSLHAGHLT----QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
             + G   TA SLH G++     Q + L    +     + L     +   DP    E  R
Sbjct: 10  RLFSGIQPTADSLHLGNVLGAVQQWVRLQHEYEALFCVVDLHAITVAQ--DP----EELR 63

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
                 + + +        S I   +       L    W        +L  +  +    R
Sbjct: 64  RRTRAVVAQYVALGVDPAKSAIFVQSHVPAHAEL---AW--------VLGCLTGYGEAAR 112

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+  +S  +   + +   F Y +L A D +     Y   +   G DQ  ++    D+
Sbjct: 113 MTQFKD-KSAKQGNDATTVGLFTYPVLMAADIL----LYQTNVVPVGDDQRQHLELTRDV 167

Query: 213 GERLK--TPKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            +R      + F L    +   +           KM K+ S    L   +  P    +  
Sbjct: 168 AQRFNGRYGQTFVLPETFVPKNAARIYDLQDPTVKMSKSASTPAGLINLLDEPAVSAKKV 227

Query: 262 RN 263
           ++
Sbjct: 228 KS 229


>gi|330956269|gb|EGH56529.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 53

 Score = 44.4 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 16/50 (32%), Gaps = 6/50 (12%)

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           AR  L S  ++I+  ++ +         F          GKK      L 
Sbjct: 4   ARDLLASGGVRIDGEVV-DRSFV-----FKLGATHVCQAGKKAFGRVTLV 47


>gi|326675349|ref|XP_003200331.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like [Danio
          rerio]
          Length = 270

 Score = 44.4 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 27 LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          LD    Q     Y G   ++ ++H GHL   +   WLQ 
Sbjct: 14 LDAFEQQKPFYLYTGRGPSSQAIHVGHLIPFIFTKWLQD 52


>gi|269925805|ref|YP_003322428.1| pseudouridine synthase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789465|gb|ACZ41606.1| pseudouridine synthase [Thermobaculum terrenum ATCC BAA-798]
          Length = 253

 Score = 44.4 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLS 405
           +  + L  L+ + G   S   A R +    + +N  I++        +D     G +   
Sbjct: 2   NEPIRLHKLLAQMG-VASRRAAERMIAEGRVSVNGRIVNTPGAMASPEDEIRVDGKLVRQ 60

Query: 406 FGKKNHIICH 415
             K  +I+ +
Sbjct: 61  QPKMRYILLN 70


>gi|212703916|ref|ZP_03312044.1| hypothetical protein DESPIG_01969 [Desulfovibrio piger ATCC 29098]
 gi|212672619|gb|EEB33102.1| hypothetical protein DESPIG_01969 [Desulfovibrio piger ATCC 29098]
          Length = 319

 Score = 44.4 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 69/221 (31%), Gaps = 34/221 (15%)

Query: 44  LTASSLHAGHLTQLML----LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH   ++     L   ++        +    ++         +        I
Sbjct: 3   PTGP-LHLGHYFGVLKNWVGLQHTEEA----YFFVADWHAL---------TSDYADPSNI 48

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N+E++      ++  G      ++          +   LL  I     + R  +++  
Sbjct: 49  ATNVEEM---VKDWVAAGLDPEKCVIFRQSAVKEHAELSLLLSMITPVSWLERNPTYKEQ 105

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           + ++  +   +     Y +L A D + + + +   +   G DQ  ++    ++  R    
Sbjct: 106 QQQITNKDLGNAGFLCYPVLMAADIL-MYRPHGVPV---GEDQLPHMELTREIARRFNYL 161

Query: 219 -------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEM 251
                       LT         G KM K+ +  I+L   M
Sbjct: 162 YGGNFFPEPQAMLTPAAKCPGLDGRKMSKSYNNGIFLRDTM 202


>gi|189501858|ref|YP_001957575.1| hypothetical protein Aasi_0430 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497299|gb|ACE05846.1| hypothetical protein Aasi_0430 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 252

 Score = 44.4 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             I  AG   S  EA   +++  I +N   I+    Q+K  D     +  L   K  +I+
Sbjct: 23  KWISNAGIC-SRREADELIQAGRITVNGEKITTLGYQVKNTDIVKFRDKVLKPNKHVYIL 81

Query: 414 CH 415
            +
Sbjct: 82  LN 83


>gi|197251005|ref|YP_002149463.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197214708|gb|ACH52105.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
          Length = 337

 Score = 44.4 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 55/175 (31%), Gaps = 19/175 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  SLH GH    +     LQ+  H+   L+     +         +      Q+I++N
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQY-HQQYVLIADLQGL---------TDNGSNPQKIRDN 61

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           I ++       +      T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 62  IPQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 121 FTRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|148253231|ref|YP_001237816.1| putative pseudouridine synthase, Rsu [Bradyrhizobium sp. BTAi1]
 gi|146405404|gb|ABQ33910.1| Putative Pseudouridine synthase, Rsu [Bradyrhizobium sp. BTAi1]
          Length = 690

 Score = 44.4 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG A S  +A   +    + +N  +I++  L +   D  
Sbjct: 371 KAGDRIAKVLARAGLA-SRRDAEEMVTQGRVTVNGRVINSPALDVTENDVI 420


>gi|332704486|ref|ZP_08424574.1| tryptophanyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554635|gb|EGJ51679.1| tryptophanyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 330

 Score = 44.4 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 78/232 (33%), Gaps = 28/232 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH   ++ L WLQ +  H+    +    ++                 E 
Sbjct: 11  GMRPTGP-LHLGHYFGVL-LNWLQMQQEHECFYFVADWHAL------------TTSYDEP 56

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++    +  +   ++  G      ++          +   LL  +     + R  +++ V
Sbjct: 57  RKIKGFVPELVKDWLASGLDPERCVIFQQSQIKEHAELHLLLSMLTPVGWLERNPTYKEV 116

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           R +++++ S ++    Y +L   D + + K     +   G DQ  ++    ++  R    
Sbjct: 117 REQMQKDLS-TYGFLGYPVLMCTDII-MYKPKWVPV---GQDQLPHLELTREIVRRFNHL 171

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                  P+     S  L    G KM K+   AI+L   M    +       
Sbjct: 172 YGDYFPEPEAKLTESAKLPGLDGRKMSKSYGNAIYLKDPMDEIRSKVMSMLT 223


>gi|298708484|emb|CBJ30608.1| Tyrosine--tRNA ligase [Ectocarpus siliculosus]
          Length = 429

 Score = 44.4 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 68/245 (27%), Gaps = 25/245 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L         Y G++ +   +H   G +  + +   L K G    
Sbjct: 92  RSVADECIQEEELKRLLEARAHPICYDGFEPSGR-MHIAQGVMRVINVNK-LTKAGCHFK 149

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D          +++     K +   +   G    +   L     
Sbjct: 150 FWVADWFAQLNNKMGGD----------LKKIQTVGKYMIEIWKATGMDMNNVEFLWASEE 199

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
           +         R +      N        +   + E   +S  +  Y  +Q  D   L   
Sbjct: 200 INRRPAEYWGRVMEVARLNNLSRVQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLK-- 257

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP---KLFALTSPLL--TTASGTKMGKTLSGAI 245
               +   G DQ    +   +  +  K     K   L+  +L        KM K+   + 
Sbjct: 258 --ADICQLGLDQRKVNMLAREYCDMTKPKIKFKPVILSHHMLAGLKEGQAKMSKSDPDSA 315

Query: 246 WLNKE 250
              ++
Sbjct: 316 IFMED 320


>gi|295673552|ref|XP_002797322.1| tryptophanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282694|gb|EEH38260.1| tryptophanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 439

 Score = 44.4 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+   +      Y G   +  +LH GH        WLQ     P+ +
Sbjct: 75  RGLFFSHRDFDHILNKYEAGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 134

Query: 74  M 74
           M
Sbjct: 135 M 135


>gi|307151436|ref|YP_003886820.1| hemolysin A [Cyanothece sp. PCC 7822]
 gi|306981664|gb|ADN13545.1| hemolysin A [Cyanothece sp. PCC 7822]
          Length = 270

 Score = 44.4 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           +V+     S  +A+R +++  +K+N  II     ++          I L  
Sbjct: 10  LVELNLCDSRQQAQRLIRAGEVKVNQQIIDKPGTEVDPS-----AEIVLQA 55


>gi|333026652|ref|ZP_08454716.1| putative tryptophanyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332746504|gb|EGJ76945.1| putative tryptophanyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 330

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 75/235 (31%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +A S H G+    +     LQ++ H    ++    + I  P   D  R   R    
Sbjct: 4   GIQPSAGSFHLGNYLGAVRQWVALQES-HDAFYMVVDMHA-ITVPQDPDTLRANTRLSAA 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q     I    S+       +  A +            ++ L   G    + +       
Sbjct: 62  QLLAAGIDPERSALFVQSHVREHAELAW---------IMNCLTGFGEASRMTQFKD---- 108

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           ++  +  +  +   F Y +LQ  D + L + +   +   G DQ  ++    DL ER    
Sbjct: 109 KAAKQGAEGTTVGLFTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELTRDLAERFNAR 164

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +    +   +           KM K+ +    L   M  P    +  ++
Sbjct: 165 YGETFVVPEAYILKETAKIYDLQEPSAKMSKSAASPKGLVNLMDEPKATAKKIKS 219


>gi|317479875|ref|ZP_07938992.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
 gi|316903949|gb|EFV25786.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
          Length = 364

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 69/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  M   ++++
Sbjct: 13  PTGR-LHIGHYVGSLRRRVELQNSGLYDKIFIFIADAQAL---------TDNMENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMIEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 176 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVQKKVKSMYT 230


>gi|160890584|ref|ZP_02071587.1| hypothetical protein BACUNI_03027 [Bacteroides uniformis ATCC 8492]
 gi|270295720|ref|ZP_06201920.1| tryptophanyl-tRNA synthetase [Bacteroides sp. D20]
 gi|156859583|gb|EDO53014.1| hypothetical protein BACUNI_03027 [Bacteroides uniformis ATCC 8492]
 gi|270273124|gb|EFA18986.1| tryptophanyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 364

 Score = 44.4 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 69/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  M   ++++
Sbjct: 13  PTGR-LHIGHYVGSLRRRVELQNSGLYDKIFIFIADAQAL---------TDNMENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMIEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 176 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVQKKVKSMYT 230


>gi|227824861|ref|ZP_03989693.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905360|gb|EEH91278.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 353

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 24/191 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTG-HLHVGHYVGSLQNRVRLQNSGDFDEIYFMIADSQAL---------TDNAENPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +N+     +   ++  G     A +        L  +    +     S    N  +  E 
Sbjct: 61  QNV---LQVALDYLAVGIDPEKATIFIQSMVPALYELTAYYMDLVTVSRVQRNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +   +    L F  F Y + QA D       +       G DQ   +    ++  +  +
Sbjct: 118 QQKNFENSVPLGF--FCYPVSQAADITAFHATH----VPVGEDQEPMLEQCREIVRKFNS 171

Query: 219 PKLFALTSPLL 229
                LT P +
Sbjct: 172 VYGETLTEPDI 182


>gi|242807612|ref|XP_002484992.1| 30S ribosomal subunit  S4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218715617|gb|EED15039.1| 30S ribosomal subunit S4, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 443

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 58/173 (33%), Gaps = 11/173 (6%)

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T+PL  + +  +   +      L++    P     +++          AK  T     E 
Sbjct: 6   TTPL--SKAKIRQSWSKYNLYNLHRFRAPPTVNKTFFQQK------WAAKSTTRSYHGEQ 57

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-SQHMPTISISK 343
            R ++         + ++      +         A   +        +  +  P  +++ 
Sbjct: 58  IRESQWTRMFSRRLRSVVPMNPVQLARDDGSIISAGRGSGLETASGTNTPKRTPYTNMTF 117

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
             + R + +   I +A FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 118 APLERRLDV--AIFRAMFASSTRQARQFVVHGAVTVNGKKMQFPGYLLNPGDL 168


>gi|302386821|ref|YP_003822643.1| tryptophanyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197449|gb|ADL05020.1| tryptophanyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 363

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 24/199 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGK-LHIGHYVGSLKRRVELQNSGEFDEIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G       +        L  + +  +     S    N  +  E 
Sbjct: 61  QNI---IEVALDYLSCGLDPEKCTLFIQSQIPELTELSFYFMNLVTVSRLQRNPTVKSEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   I    ++  +  +
Sbjct: 118 AMRNFETSIPVGF--FTYPISQAADITAFQ----ATTVPVGEDQEPMIEQTREIVRKFNS 171

Query: 219 PKLFALTSPLLTTASGTKM 237
               AL  P +   +    
Sbjct: 172 VYGDALVEPEILLPNNKAC 190


>gi|147921289|ref|YP_684897.1| putative ribosomal RNA methyltransferase [uncultured methanogenic
           archaeon RC-I]
 gi|110620293|emb|CAJ35571.1| putative ribosomal RNA methyltransferase [uncultured methanogenic
           archaeon RC-I]
          Length = 216

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 7/57 (12%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-------TGNIKLS 405
           +V  G   S + A+R++    +K+N  +++    Q+K              G  KL 
Sbjct: 7   LVSEGLIASRSRAKRYIHRGLVKLNGEVVTKPSKQVKPGAIIEIAEEDRPEGYFKLK 63


>gi|225849728|ref|YP_002729962.1| hemolysin A [Persephonella marina EX-H1]
 gi|225646217|gb|ACO04403.1| hemolysin A [Persephonella marina EX-H1]
          Length = 272

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE--KLQIKLQDFDSTGNIKLSFG 407
           +  L+V+ G   S  +A+R + +  + +N+  +     K+ +    F       +S G
Sbjct: 7   IDKLLVERGLVESREKAQRLIMAGCVFVNDQRVDKPGTKIPVDANIFLKEKEKYVSRG 64


>gi|254460191|ref|ZP_05073607.1| ribosomal large subunit pseudouridine synthase [Rhodobacterales
           bacterium HTCC2083]
 gi|206676780|gb|EDZ41267.1| ribosomal large subunit pseudouridine synthase [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 310

 Score = 44.4 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           E  +G  +  ++ +AG   S  EA R + +  I ++  II +  L +
Sbjct: 4   ETPKGDRIAKVLARAG-VASRREAERMIDAGRISVDGKIIDSPALNV 49


>gi|291005221|ref|ZP_06563194.1| tryptophanyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 346

 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 24/190 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   TA S H G+      L     +Q+T H     +    +             +    
Sbjct: 22  GIQPTADSFHLGNYLG--ALREWVVMQET-HDAFYCVVDLHA-------------ITMGH 65

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           + +    + +   +  +  G     A +          +   ++  +  F    RM  F+
Sbjct: 66  DPELLRRRTRLSAAQLLALGIDPERATLFVQSHVPEHTQLSWVMECLTGFGEAGRMTQFK 125

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +S  +    +S   F Y +LQA D + + +     +   G DQ  ++    +L +R  
Sbjct: 126 D-KSARQEADHVSVGLFTYPVLQAADIL-IYQADAVPV---GEDQRQHLELTRNLAQRFN 180

Query: 218 TPKLFALTSP 227
           +      T P
Sbjct: 181 SRFGETFTVP 190


>gi|134103023|ref|YP_001108684.1| tryptophanyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915646|emb|CAM05759.1| tryptophanyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 328

 Score = 44.4 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 24/190 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   TA S H G+      L     +Q+T H     +    +             +    
Sbjct: 4   GIQPTADSFHLGNYLG--ALREWVVMQET-HDAFYCVVDLHA-------------ITMGH 47

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           + +    + +   +  +  G     A +          +   ++  +  F    RM  F+
Sbjct: 48  DPELLRRRTRLSAAQLLALGIDPERATLFVQSHVPEHTQLSWVMECLTGFGEAGRMTQFK 107

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +S  +    +S   F Y +LQA D + + +     +   G DQ  ++    +L +R  
Sbjct: 108 D-KSARQEADHVSVGLFTYPVLQAADIL-IYQADAVPV---GEDQRQHLELTRNLAQRFN 162

Query: 218 TPKLFALTSP 227
           +      T P
Sbjct: 163 SRFGETFTVP 172


>gi|317124330|ref|YP_004098442.1| tryptophanyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588418|gb|ADU47715.1| tryptophanyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 344

 Score = 44.4 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 73/280 (26%), Gaps = 39/280 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQ 97
           G   T+ SLH G+    ++    LQ++ H     +    S+    DP      R    + 
Sbjct: 18  GMQPTSDSLHLGNYIGALVEWVKLQES-HDAFYFVADLHSLTVFPDP-GVLRERTRATAA 75

Query: 98  EI-QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +     ++  + +             A       W            + +          
Sbjct: 76  QFIAGGVDPTRSVLFVQSHVAQHTELA-------W-----------VLSTLTGFGEASRM 117

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +  +    +   F Y +L A D +     YD  +   G DQ  ++    DL  R 
Sbjct: 118 TQFKDKTAKGAVANVGLFTYPVLMAADIL----IYDPAVVPVGEDQRQHLELSRDLAGRF 173

Query: 217 K--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
                +   +  P +               KM K+ +    L   +  P    +  R+  
Sbjct: 174 NQRFGETLVVPEPHIIREIAKIQDLQEPTAKMSKSAASDSGLISLLEDPARIAKKIRSAV 233

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
                         P                 A+   A E
Sbjct: 234 TDTEREIRYDPAAKPGVSNLLSIHHALSGTPIAQLEAAFE 273


>gi|288801457|ref|ZP_06406910.1| ribosomal large subunit pseudouridine synthase B [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288331668|gb|EFC70153.1| ribosomal large subunit pseudouridine synthase B [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 479

 Score = 44.0 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 42/110 (38%), Gaps = 3/110 (2%)

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG--LLTLIVKAGFATST 365
              +     ++        +D +        I   +D +   +   L   +  AG   S 
Sbjct: 200 RQGYNPGYRQQNQRQRTPGYDPNAKYSLKKRIEYREDHIDPTLPVRLNKFLANAGVC-SR 258

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            EA  ++++ ++ +N  +++    ++   D    G+  +S  KK +I+ +
Sbjct: 259 READEYIQAGSVTVNGQVVTELGTKVMRTDEVKFGDNLVSLEKKVYILIN 308


>gi|260907097|ref|ZP_05915419.1| tryptophanyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 332

 Score = 44.0 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 62/212 (29%), Gaps = 31/212 (14%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSII--GDPSFR 87
           S    T   G   T+ SLH G+      L         H     +    +I    DP+  
Sbjct: 4   SSQPRTV-SGIQATSDSLHLGNYIG--ALQQFVAHQESHDAFYFIANMHAITVEQDPT-- 58

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                 +R + ++   + I             ++        +W+               
Sbjct: 59  -----DLRERTLRTAAQFIAAGIDPEKSTIFVQSQVPAHPQLSWVLE-----------CT 102

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            S+         + +  ++  +S     Y  L A D +     Y+ ++   G DQ  ++ 
Sbjct: 103 TSMGEASRMTQFKDKSAKQDHVSLGLLTYPALMAADIL----LYNPQMVPVGEDQRQHLE 158

Query: 208 CGIDLGERLKT--PKLFALTSPLLTTASGTKM 237
              +L ER      + F +    +  A+    
Sbjct: 159 LTRNLAERFNYRFGETFVVPEAQILKATAKIY 190


>gi|223038553|ref|ZP_03608847.1| RNA pseudouridine synthase family protein [Campylobacter rectus
           RM3267]
 gi|222880410|gb|EEF15497.1| RNA pseudouridine synthase family protein [Campylobacter rectus
           RM3267]
          Length = 257

 Score = 44.0 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +K   + IN  ++S     +  +D        +   KK   + 
Sbjct: 17  SRREADELIKQGKVSINGRVVSELATSVSDEDKVKINGRIVRL-KKEFTVI 66


>gi|17944165|gb|AAL47978.1| GH09538p [Drosophila melanogaster]
          Length = 516

 Score = 44.0 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 99/310 (31%), Gaps = 44/310 (14%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   ++     + G   T  SLH G+    +     LQ         +    SI      
Sbjct: 72  EEHNTRWPRKVFSGIQPTG-SLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSIT----- 125

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                       ++ENI  +    ++ +  G   T + +          ++  +L  + +
Sbjct: 126 -----MPHNPPLLRENIFTM---AATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D   L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAADI-MLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLTT--------------ASGTKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T                   KM K+ +          
Sbjct: 231 QLAQHLARIYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCD 288

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           SP    Q  +      V  F   +T  P   + +  +  +  +   ++ K +  E  T+ 
Sbjct: 289 SPDLITQKIK----KAVTDFTSDITYNPGKRAGVSNLVNIHAQVTGQSIKTVVNEAATLD 344

Query: 311 HGREEAEKAA 320
             + +   A 
Sbjct: 345 TAKYKDRVAE 354


>gi|24666151|ref|NP_649018.2| CG7441 [Drosophila melanogaster]
 gi|7293931|gb|AAF49293.1| CG7441 [Drosophila melanogaster]
 gi|66803739|gb|AAY56635.1| unknown [Drosophila melanogaster]
 gi|201065663|gb|ACH92241.1| FI03887p [Drosophila melanogaster]
          Length = 665

 Score = 44.0 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 99/310 (31%), Gaps = 44/310 (14%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   ++     + G   T  SLH G+    +     LQ         +    SI      
Sbjct: 72  EEHNTRWPRKVFSGIQPTG-SLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSIT----- 125

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                       ++ENI  +    ++ +  G   T + +          ++  +L  + +
Sbjct: 126 -----MPHNPPLLRENIFTM---AATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D   L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAADI-MLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLTT--------------ASGTKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T                   KM K+ +          
Sbjct: 231 QLAQHLARIYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCD 288

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           SP    Q  +      V  F   +T  P   + +  +  +  +   ++ K +  E  T+ 
Sbjct: 289 SPDLITQKIK----KAVTDFTSDITYNPGKRAGVSNLVNIHAQVTGQSIKTVVNEAATLD 344

Query: 311 HGREEAEKAA 320
             + +   A 
Sbjct: 345 TAKYKDRVAE 354


>gi|310795090|gb|EFQ30551.1| tryptophanyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 489

 Score = 44.0 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 10/116 (8%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD +  +     Y G   ++ S+H GH+    L  WL      P+ +      ++ D   
Sbjct: 97  LDRVEKKEPFFIYTGRGPSSDSMHIGHVIPFQLTKWLSDVLDAPLVI------MMTD--- 147

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
            DE       + ++E     +      I  G       + ++  ++    Y ++ R
Sbjct: 148 -DEKFLFSEKRTVEEVQHYTRENAKDIIAIGFNPERTFIFSDYDYMGGAFYRNITR 202


>gi|67623115|ref|XP_667840.1| tyrosyl-tRNA synthetase [Cryptosporidium hominis TU502]
 gi|54659012|gb|EAL37613.1| tyrosyl-tRNA synthetase [Cryptosporidium hominis]
          Length = 376

 Score = 44.0 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/255 (10%), Positives = 66/255 (25%), Gaps = 30/255 (11%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHKPISL 73
            +     EL  L   +     Y G++ +   +H          +  L      G   +  
Sbjct: 41  EECIQEAELLELLKRKEHPICYDGFEPSGR-MHIAQCILKTINVNKLTEC---GCVFVFY 96

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    +++ +    D  +  +  +      +            G   T+   +    ++ 
Sbjct: 97  VADWFALLNNKMGGDLEKIKIVGEYFVHIWKAA----------GMDMTNVRFVWASDFIN 146

Query: 134 SIKYI-DLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   LR        N        +    +           Y  +Q  D  +L    
Sbjct: 147 GEDSNEYWLRVFDISRKFNITRIKRCCQIMGRQENDEQPCASVFYPCMQCADIFQLK--- 203

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKL-FALTSPLLTT--ASGTKMGKTLSGAIWLN 248
              +   G DQ    +   +  +     +    L+  +L        KM K+ + +    
Sbjct: 204 -ADICQLGMDQRKVNMLAREYCDVAGIKQKPVILSHKMLPGLLEGQEKMSKSDTSSAIFV 262

Query: 249 KEMTSPYNFWQYWRN 263
           +   +P    +  + 
Sbjct: 263 E--DTPEAIVKKIKK 275


>gi|256273838|gb|EEU08760.1| Nam9p [Saccharomyces cerevisiae JAY291]
          Length = 486

 Score = 44.0 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG              F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLT---EKRWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
                   + +A FA+S  +AR+ +    +++N   I +    +K  D  S   +K+
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPVKV 157


>gi|197106628|ref|YP_002132005.1| pseudouridine synthase, Rsu [Phenylobacterium zucineum HLK1]
 gi|196480048|gb|ACG79576.1| pseudouridine synthase, Rsu [Phenylobacterium zucineum HLK1]
          Length = 521

 Score = 44.0 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 8/102 (7%)

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            +A             GR  + +A   + +  +        P   +       G  +  L
Sbjct: 104 RDAHGAAVMIHDPHRTGRGPSGQARL-SDDPPESGSEPGGEPGTEL------GGERIAKL 156

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + ++G   S  +  R +    + IN  +++   ++++  D  
Sbjct: 157 LARSG-VGSRRDVERLIAEGRVAINGQVLTTPAVKVEPGDIL 197


>gi|119358165|ref|YP_912809.1| 30S ribosomal protein S4 [Chlorobium phaeobacteroides DSM 266]
 gi|152060943|sp|A1BJ08|RS4_CHLPD RecName: Full=30S ribosomal protein S4
 gi|119355514|gb|ABL66385.1| SSU ribosomal protein S4P [Chlorobium phaeobacteroides DSM 266]
          Length = 203

 Score = 44.0 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G  L+ L+         ++GFA S + AR+ +    + IN   ++     +   +   
Sbjct: 84  GDNLVKLLERRFDNVVFRSGFAASRSAARQLVTHGHLTINGKKVNIPSYLLTPGELIE 141


>gi|226292138|gb|EEH47558.1| tryptophanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 432

 Score = 44.0 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +    L+   +      Y G   +  +LH GH        WLQ 
Sbjct: 75  RGLFFSHRDFDHILNKYEAGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQD 126


>gi|303391337|ref|XP_003073898.1| tryptophanyl-tRNA synthetase [Encephalitozoon intestinalis ATCC
           50506]
 gi|303303047|gb|ADM12538.1| tryptophanyl-tRNA synthetase [Encephalitozoon intestinalis ATCC
           50506]
          Length = 385

 Score = 44.0 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 23/240 (9%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
            LD +        Y G   ++ ++H GH+   +L  ++Q T  K   ++      I D  
Sbjct: 71  LLDEVSKNKSFYLYTGRGPSSKAMHIGHIIPFLLCKYIQDT-FKVHLVI-----QITD-- 122

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
              + + + ++ ++++ I   K      I  G       + +N                 
Sbjct: 123 ---DEKFLWKNMKLEDAISYGKENMKDIIALGFDPKLTYIFSNVE--------SSHHFEK 171

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY----DFVELAKNYDCRLQMGGSD 201
           +   +++ ++F  V        S +  +  +   +         +  +     L     D
Sbjct: 172 NVLKISKTINFNEVSKIFGFNTSSNIGQVGFPSKEIAPCFPSSFKFIEEDAMCLVFAAVD 231

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
           Q        D    L   K  +    LL    G     + S          +P    +  
Sbjct: 232 QDPFFRLARDKANTLGERKPSSAYVSLLPDLKGVNRKMSASDPNSSIYLDDTPETIRKKI 291


>gi|297184802|gb|ADI20912.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB080_L93H08]
          Length = 74

 Score = 44.0 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
              +++GG+DQ  N++ G  L +         +  PLL    G  KM K+ +  I L
Sbjct: 7   QADVELGGTDQKFNLLMGRHLQQIYGQKPQSVIMLPLLEGLDGIKKMSKSANNYIAL 63


>gi|146319838|ref|YP_001199550.1| tryptophanyl-tRNA synthetase II [Streptococcus suis 05ZYH33]
 gi|146322029|ref|YP_001201740.1| tryptophanyl-tRNA synthetase II [Streptococcus suis 98HAH33]
 gi|145690644|gb|ABP91150.1| tryptophanyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692835|gb|ABP93340.1| tryptophanyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|292559434|gb|ADE32435.1| Tryptophanyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 363

 Score = 44.0 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 46/181 (25%), Gaps = 19/181 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G H+    +    ++       D ++   +  E   
Sbjct: 34  PTGK-LHIGHYVGSLKNRVLLQDAGQHELFVFLADQQAL------TDHAKEPQKIVESVG 86

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+                KT   + +    L  +    +     +    N  +  E  + 
Sbjct: 87  NVALDY----LAAGLDPAKTTIFIQSQIPELAELTMYYMNLVSVARLERNPTVKTEIAQK 142

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
                    F    Y + QA D               G+DQ   I    ++         
Sbjct: 143 GFGEGIPAGF--LVYPVSQAADITAFK----ANFVPVGNDQKPMIEQTREIVRSFNHAYQ 196

Query: 222 F 222
            
Sbjct: 197 T 197


>gi|66475658|ref|XP_627645.1| tyrosyl-tRNA synthetase (tyrosyl-tRNA ligase; TyrRS). class-I aaRS
           [Cryptosporidium parvum Iowa II]
 gi|46229080|gb|EAK89929.1| tyrosyl-tRNA synthetase (tyrosyl-tRNA ligase; TyrRS). class-I aaRS
           [Cryptosporidium parvum Iowa II]
 gi|323508799|dbj|BAJ77293.1| cgd6_2970 [Cryptosporidium parvum]
          Length = 376

 Score = 44.0 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/255 (10%), Positives = 66/255 (25%), Gaps = 30/255 (11%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHKPISL 73
            +     EL  L   +     Y G++ +   +H          +  L      G   +  
Sbjct: 41  EECIQEAELLELLKRKEHPICYDGFEPSGR-MHIAQCILKTINVNKLTEC---GCVFVFY 96

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    +++ +    D  +  +  +      +            G   T+   +    ++ 
Sbjct: 97  VADWFALLNNKMGGDLEKIKIVGEYFVHIWKAA----------GMDMTNVRFVWASDFIN 146

Query: 134 SIKYI-DLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   LR        N        +    +           Y  +Q  D  +L    
Sbjct: 147 GEDSNEYWLRVFDISRKFNITRIKRCCQIMGRQENDEQPCASVFYPCMQCADIFQLK--- 203

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWLN 248
              +   G DQ    +   +  +      K   L+  +L        KM K+ + +    
Sbjct: 204 -ADICQLGMDQRKVNMLAREYCDAAGIKHKPVILSHKMLPGLLEGQEKMSKSDTSSAIFV 262

Query: 249 KEMTSPYNFWQYWRN 263
           +   +P    +  + 
Sbjct: 263 E--DTPEAVVKKIKK 275


>gi|169831362|ref|YP_001717344.1| tryptophanyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638206|gb|ACA59712.1| tryptophanyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 327

 Score = 44.0 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 72/234 (30%), Gaps = 38/234 (16%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI---IGDP-SFRDE 89
             +    G   +   LH GHL+ L     LQ+  +     +    ++     DP S  + 
Sbjct: 2   KELRIVSGMRPSGR-LHIGHLSVLSNWLRLQEE-NDCFFFVADWHALTTAFDDPGSIGEN 59

Query: 90  SRRMMRSQEIQEN--IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
           +R M+                + S  +++        M+   +WL  +            
Sbjct: 60  TREMLADWLAVGIDPERSTVFVQSRLLEHAELHLLLSMITPLSWLERVPTY--------- 110

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
                    + V+    R + ++   F  Y +LQ  D + + +     +   G DQ  ++
Sbjct: 111 --------KDQVQQLAARGKDITTYGFLGYPLLQTADIL-MYRADAVPV---GQDQLPHL 158

Query: 207 ICGIDLGERLKTPKLFALTSP--------LLTTASGTKMGKTLSGAIWLNKEMT 252
               ++  R           P        LL    G KM K+    I L+    
Sbjct: 159 ELSREVARRFNHLYGNVFPEPQALLAKESLLPGVDGRKMSKSYENEISLSASPD 212


>gi|254387233|ref|ZP_05002497.1| tryptophanyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
 gi|194346042|gb|EDX27008.1| tryptophanyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
          Length = 337

 Score = 44.0 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 74/245 (30%), Gaps = 31/245 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +     A  G   T+ S H G+    +     LQ+T H    ++    +I         
Sbjct: 1   MASDRPRALSGIQPTSGSFHLGNYLGAIRQYVALQET-HDAFYMVVDLHAIT-------- 51

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                  ++++ N         +    G       +          +   ++  I  F  
Sbjct: 52  --MPQDPKDLRANTRLSAAQLLAA---GLDPERCTLFIQSHVPEHAQLGWVMNCITGFGE 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S      + +   F Y ILQ  D + L +     +   G DQ  +I   
Sbjct: 107 ASRMTQFKD-KSAKSGANNATVGLFTYPILQVADIL-LYQANAVPV---GEDQRQHIELT 161

Query: 210 IDLGERLKTPKLFALTSP-----------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER  T      T P                   KM K+ S    L   +  P    
Sbjct: 162 RDLAERFNTRFGKTFTLPAAHIVKEVAKIYDLQDPAIKMSKSASSPKGLINLLDEPKVTE 221

Query: 259 QYWRN 263
           +  ++
Sbjct: 222 KKIKS 226


>gi|291535186|emb|CBL08298.1| tryptophanyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 361

 Score = 44.0 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 70/222 (31%), Gaps = 32/222 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +       +++
Sbjct: 12  PTGK-LHVGHYVGSLKRRVELQNSGEYDKIFIMIADAQAL---------TDNADNPAKVR 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            NI ++  +    +     K+D  + +  T L  + +  +     S    N  +  E   
Sbjct: 62  SNIMEV-ALDYLSVGIDPAKSDIFIQSYVTELTELTFYYMNLVTVSRLQRNPTVKSEIQM 120

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  +     
Sbjct: 121 RNFETSIPVGF--FCYPISQAADITAFH----ATTVPVGEDQMPMLEQTKEIVHKFNAVY 174

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKE 250
              LT P +             T    KM K+L   I+L++ 
Sbjct: 175 GETLTDPQILLPENKACLRLPGTDGKAKMSKSLGNCIYLSEP 216


>gi|242278582|ref|YP_002990711.1| tryptophanyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121476|gb|ACS79172.1| tryptophanyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 331

 Score = 44.0 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 104/310 (33%), Gaps = 40/310 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            S+       G   T   LH GH    L+    +Q+  H+    +    ++         
Sbjct: 1   MSKTNNRIVSGMRPTGR-LHLGHYFGVLVNWVRIQE-DHECYFFVADWHAM--------- 49

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +      ++IQ  +     +   +I  G      ++ +       I+   +L  +     
Sbjct: 50  TSEYSDPRKIQGFVP---ELVKDWIAAGLDPEKCVIFHQSQVKEHIELHLILSMLTPLGW 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + R  +++ ++  L +++  ++    Y +L A D + + K     +   G DQ  ++   
Sbjct: 107 LERNPTYKELKQELVQKELNTYGFLGYPVLMASDIL-MYKPSQVPV---GQDQLPHLELA 162

Query: 210 IDLGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ++  R               LT    L    G KM K+ +  I+L + M          
Sbjct: 163 REIARRFNHLNGEFFPEPKALLTEDAKLPGLDGRKMSKSYNNGIYLGESMDEVKPKVMSM 222

Query: 262 RNIDDA------------DVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               +             ++  + K LT     +EI+   +   +   E KK++A  +  
Sbjct: 223 LTDKNRLRKSDPGDPEVCNLYPYHKLLTDADTCAEIEEGCRNASRGCVECKKLLAENMAK 282

Query: 309 MVHGREEAEK 318
            +   +E  +
Sbjct: 283 FLEPMQERRR 292


>gi|32398875|emb|CAD98585.1| tyrosyl-tRNA synthetase, probable [Cryptosporidium parvum]
          Length = 376

 Score = 44.0 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 28/255 (10%), Positives = 66/255 (25%), Gaps = 30/255 (11%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHKPISL 73
            +     EL  L   +     Y G++ +   +H          +  L      G   +  
Sbjct: 41  EECIQEAELLELLKRKEHPICYDGFEPSGR-MHIAQCILKTINVNKLTEC---GCVFVFY 96

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    +++ +    D  +  +  +      +            G   T+   +    ++ 
Sbjct: 97  VADWFALLNNKMGGDLEKIKIVGEYFVHIWKAA----------GMDMTNVRFVWASDFIN 146

Query: 134 SIKYI-DLLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   LR        N        +    +           Y  +Q  D  +L    
Sbjct: 147 GEDSNEYWLRVFDISRKFNITRIKRCCQIMGRQENDEQPCASVFYPCMQCADIFQLK--- 203

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGAIWLN 248
              +   G DQ    +   +  +      K   L+  +L        KM K+ + +    
Sbjct: 204 -ADICQLGMDQRKVNMLAREYCDAAGIKHKPVILSHKMLPGLLEGQEKMSKSDTSSAIFV 262

Query: 249 KEMTSPYNFWQYWRN 263
           +   +P    +  + 
Sbjct: 263 E--DTPEAVVKKIKK 275


>gi|240169088|ref|ZP_04747747.1| tryptophanyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 343

 Score = 44.0 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 88/313 (28%), Gaps = 35/313 (11%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTS--IIGDPSFRDE 89
           G    + G   T+ SLH G+    +   W  LQ   H     +    +  +  DP     
Sbjct: 6   GSRRIFSGVQPTSDSLHLGNALGAVT-QWVALQD-DHDAFFCVVDLHAITLPQDP----- 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
               +R + +    + +             ++     +   W        +L     F  
Sbjct: 59  --EALRRRTLITAAQYLALGIDPARATIFVQSHVPAHSQLAW--------VLGCFTGFGQ 108

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S  +  +S +   F Y +LQA D +     YD  L   G DQ  ++   
Sbjct: 109 ASRMTQFKD-KSSRQGAESTTVGLFTYPVLQAADVLA----YDSDLVPVGEDQRQHLELA 163

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            D+ +R  +        P +     T     L        +  S         +      
Sbjct: 164 RDVAQRFNSRFPDTFVVPDVLIPKITAKIYDLQDPTSKMSKSASTDAGLISLLDDPALSA 223

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                 +T               +   +AK  ++  ++          +A   A      
Sbjct: 224 KKIRSAVTDSERE---------IRYDPDAKPGVSNLLSIQSAVTGVGIEALVDAYAGRGY 274

Query: 330 SIHSQHMPTISIS 342
               +      ++
Sbjct: 275 GDLKKDTAEAVVA 287


>gi|145242130|ref|XP_001393711.1| tryptophanyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134078256|emb|CAK96837.1| unnamed protein product [Aspergillus niger]
          Length = 433

 Score = 44.0 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +   +  L         Y G   +  SLH GH   L    WLQ 
Sbjct: 68  RGLFFSHRDFDRILTLYERGEPFFLYTGRGPSTGSLHLGHTIPLQFTKWLQD 119


>gi|254820254|ref|ZP_05225255.1| tryptophanyl-tRNA synthetase [Mycobacterium intracellulare ATCC
           13950]
          Length = 339

 Score = 44.0 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 79/238 (33%), Gaps = 37/238 (15%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSI--IGDPSFR 87
           + G    + G   T+ SLH G+    +   W  LQ   H     +    +I    DP   
Sbjct: 4   ATGSSRIFSGVQPTSDSLHLGNALGAVT-HWVELQD-DHDAFFCVVDLHAITVAQDP--- 58

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                 +R + +    + +             ++     +   W        +L     F
Sbjct: 59  ----EALRRRTLVTAAQYLALGIDPARSTVFVQSHVPAHSQLAW--------VLGCFTGF 106

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +RM  F+  +S  +   S +   F Y +LQA D +     YD  L   G DQ  ++ 
Sbjct: 107 GQASRMTQFKD-KSLRQGADSTTVGLFTYPVLQAADVLA----YDTDLVPVGEDQRQHLE 161

Query: 208 CGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSP 254
              D+ +R     P  F +   L+  A+           KM K+ +    L   +  P
Sbjct: 162 LARDVAQRFNARFPDTFVVPDVLIPKATAKIYDLQDPTSKMSKSAATDAGLINLLDDP 219


>gi|184201442|ref|YP_001855649.1| tryptophanyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581672|dbj|BAG30143.1| tryptophanyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 342

 Score = 44.0 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 59/202 (29%), Gaps = 30/202 (14%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGG----GTSIIGDPSF 86
           +  +     G   +A SLH G+    L     +Q   +  +  +       T    DP  
Sbjct: 8   TNRIPRVVSGVQPSADSLHLGNYVGALRNWVDMQDE-NDCVFFVADLHSITTGQ--DP-- 62

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                  M  +      + I             ++         W+ +      +   G 
Sbjct: 63  -----ATMSERTRVTAAQYIAAGIDPERSTLLIQSQVPEHTQLAWVLN-----CITGYGE 112

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + +     SV+   +     +   F Y +L A D + + +     +   G DQ  ++
Sbjct: 113 AARMTQFKDK-SVKQGAENT---TVGLFTYPVLMAADIL-VYQANQVPV---GEDQRQHL 164

Query: 207 ICGIDLGERLKTPKLFALTSPL 228
                L +R  +   F  T  +
Sbjct: 165 ELTRTLAQRFNSR--FGATFEV 184


>gi|329938092|ref|ZP_08287543.1| tryptophanyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329302581|gb|EGG46471.1| tryptophanyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 339

 Score = 44.0 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 33/246 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ+T H    ++    +I                 E+
Sbjct: 13  GIQPTAGSFHLGNYLGAVRQWVALQET-HDAFYMVVDLHAIT----------VQQDPAEL 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N    +   +  +  G       +          +   ++  +  +    RM  F+  
Sbjct: 62  RAN---TRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLAWVMNCLTGYGEAQRMTQFKD- 117

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +S  +     +   F Y ILQ  D + L + ++  +   G DQ  +I    DL ER    
Sbjct: 118 KSAKQGADRTTVGLFTYPILQVADIL-LYQAHEVPV---GEDQRQHIELTRDLAERFNGR 173

Query: 220 KLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN--IDD 266
                T P   +   +           KM K+ S    L   +  P    +  ++   D 
Sbjct: 174 FGETFTVPKAYILKETAKIFDLQDPAIKMSKSASTPKGLINLLDEPKATAKKVKSAVTDT 233

Query: 267 ADVVSF 272
             V+ +
Sbjct: 234 DTVIRY 239


>gi|154337758|ref|XP_001565105.1| tryptophanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062152|emb|CAM36540.1| putative tryptophanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 489

 Score = 44.0 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 107/365 (29%), Gaps = 36/365 (9%)

Query: 9   LSILSERGF------IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           L     RG       +H+  +  E  I   +  V  Y G   +A ++HAGH+   ML  +
Sbjct: 143 LHHFFSRGIAFSHRDLHKALDDIEASIKPDEPSVFLYTGRGPSAGTMHAGHVLPFMLAKY 202

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ   + P+ +       I D   +   R +     + E +  I       I +G     
Sbjct: 203 LQDVFNLPLVI------QITD-DEKFLFRGVPFEGAVAEEV--ILNNIKDIIAFGFHPRH 253

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  ++  +          +   + R ++  SV+  L    S +  +F +   QA 
Sbjct: 254 TFIFRNTHYMGELYP--------TVLPLQRSMTGNSVKHTLGITDSDNVGKFAFPATQAA 305

Query: 183 DFVELA---------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
                A         +   C +     DQ    +       RLK P    L +  L    
Sbjct: 306 PCFSTAFRRVLPNGDRPMRCLIPC-AIDQDPFFVLTRAAAPRLKQPPPALLHTQFLPALK 364

Query: 234 GT--KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           G   KM  +      +     +     +  R        +  +   T    ++D   +  
Sbjct: 365 GLEHKMSSSAEEN-GVITLHDTDKQVRKKLRRAFSGGCATLEQMQETGANLKVDVAYQYL 423

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
                +                   +    AA       +H        +S D+V     
Sbjct: 424 RFFCRDDALFADVTQRYGRGTMNSGDVKDLAADCIIRDVLHDWREQRAKVSDDDVVNFCR 483

Query: 352 LLTLI 356
           +  ++
Sbjct: 484 IRDIL 488


>gi|296120097|ref|ZP_06838651.1| tryptophan--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967251|gb|EFG80522.1| tryptophan--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 350

 Score = 44.0 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 78/250 (31%), Gaps = 33/250 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ  G      +    +I  D              E+
Sbjct: 23  GIQPTADSYHLGNYLGALKQWIDLQD-GFDAFYFIPDLHAITVD----------QDPAEL 71

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +E            I  G     + +          +   +L+ +  F   +RM  F+  
Sbjct: 72  RERTIAGAAQL---IALGIDPKRSTLYVQSQVPAHAELTWVLQCMTGFGEASRMTQFKD- 127

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +S    +   S   F Y +L A D +     Y       G DQ  ++    +L ER    
Sbjct: 128 KSARHGQDRTSVGLFTYPVLMAADIL----LYSPDFVPVGEDQRQHLELTRNLAERFNSR 183

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN--IDD 266
             + F +    +   S           KM K+      L   + +P    +  R+   DD
Sbjct: 184 FGETFRVPEAYIPQGSAKIYDLQDPTAKMSKSGPNPKGLINLLDAPKTSAKRIRSAVTDD 243

Query: 267 ADVVSFAKRL 276
             VV+F +  
Sbjct: 244 LGVVNFDRDN 253


>gi|253752814|ref|YP_003025955.1| tryptophanyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754639|ref|YP_003027780.1| tryptophanyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756572|ref|YP_003029712.1| tryptophanyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251817103|emb|CAZ52755.1| tryptophanyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251819036|emb|CAZ56883.1| tryptophanyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820885|emb|CAR47651.1| tryptophanyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319759230|gb|ADV71172.1| tryptophanyl-tRNA synthetase II [Streptococcus suis JS14]
          Length = 341

 Score = 44.0 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 46/181 (25%), Gaps = 19/181 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G H+    +    ++       D ++   +  E   
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQDAGQHELFVFLADQQAL------TDHAKEPQKIVESVG 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+                KT   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  NVALDY----LAAGLDPAKTTIFIQSQIPELAELTMYYMNLVSVARLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
                    F    Y + QA D               G+DQ   I    ++         
Sbjct: 121 GFGEGIPAGF--LVYPVSQAADITAFK----ANFVPVGNDQKPMIEQTREIVRSFNHAYQ 174

Query: 222 F 222
            
Sbjct: 175 T 175


>gi|94265729|ref|ZP_01289466.1| Tryptophanyl-tRNA synthetase, class Ib [delta proteobacterium
           MLMS-1]
 gi|93453742|gb|EAT04118.1| Tryptophanyl-tRNA synthetase, class Ib [delta proteobacterium
           MLMS-1]
          Length = 322

 Score = 44.0 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 89/338 (26%), Gaps = 42/338 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+   +M         H   + +    ++                 + +
Sbjct: 6   GIQPSGQ-LHIGNYFGMMKPMIANMAEHDLYAFIVDLHAL-------------TSVHDAK 51

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             +       + F+  G                  +  +L   +     +  +    S +
Sbjct: 52  RLVGGTLEAAADFLALGLDPRRCTFWVQSD---VPEVTELTWVLSCVTPMGLLERCHSYK 108

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            +  R  + S   F Y +L A D + L +     +   G DQ  ++    D+  +     
Sbjct: 109 DKTARGLAASHGLFAYPVLMAADIL-LYQGQRVPV---GKDQQQHLEVARDIALKFNH-- 162

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
            F  T  L   A    +         L+ +  S          +D   +      + T  
Sbjct: 163 TFGDTFVLPEAAIEDNLATI----PGLDGQKMSKSYDNTIPIFLDAKALKKRVMAIVTDS 218

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
                     +    N  K     E    V G      A    ++   + I  ++     
Sbjct: 219 TPVEQPKDPDKCNLYNIYKLFAPPERLAEVRGLYVNGGAMYGRIKLELVDILWEYFSQAR 278

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
             + E         L+   G      + R  L+  A+K
Sbjct: 279 QRRQE---------LLADPG------QLREILRQGAVK 301


>gi|330833975|ref|YP_004408703.1| tryptophanyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566114|gb|AEB94219.1| tryptophanyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 380

 Score = 44.0 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 78/283 (27%), Gaps = 26/283 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGD 83
           L           Y G    A SL  H GH+   +   WLQ K G      +         
Sbjct: 64  LKEWKEGRSFFLYTGR---APSLGMHIGHMIPFVFTAWLQKKFGVNVYIEITD------- 113

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
               DE         + +  +         I  G       +  +  ++ ++  + +   
Sbjct: 114 ----DEKFMRNLEYSLDQTRQWALDNILDIIAAGFDPDKTFIFQDTEYIRNMYPLAI--- 166

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
                 + + L+F  V++    + S +     Y  LQ    +   +       +     W
Sbjct: 167 -----KIAKKLTFSEVKATFGLDVSSNIGIIFYPSLQIVPTMFEKRRCLIPAGIDQDPYW 221

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                  +     K  ++ +   P LT            S    ++   T      +Y  
Sbjct: 222 RLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSSSVPESAIYLIDDHKTVERKVMKYAF 281

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +     V    K    L +    +      +E ++  K IA E
Sbjct: 282 SGGQPTVELQRKLGANLDVDVPYQWLYYFFEEDDQKIKRIAEE 324


>gi|330833792|ref|YP_004402617.1| tryptophanyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329308015|gb|AEB82431.1| tryptophanyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 341

 Score = 44.0 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 46/181 (25%), Gaps = 19/181 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G H+    +    ++       D ++   +  E   
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQDAGQHELFVFLADQQAL------TDHAKEPQKIVESVG 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+                KT   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  NVALDY----LAAGLDPAKTTIFIQSQIPELAELTMYYMNLVSVARLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
                    F    Y + QA D               G+DQ   I    ++         
Sbjct: 121 GFGEGIPAGF--LVYPVSQAADITAFK----ANFVPVGNDQKPMIEQTREIVRSFNHAYQ 174

Query: 222 F 222
            
Sbjct: 175 T 175


>gi|328907882|gb|EGG27645.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium
           sp. P08]
          Length = 245

 Score = 44.0 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   +V+AG A S   A R ++   + +N  +++   +++   D
Sbjct: 1   MRLDQALVEAGLARSRTLATRLVREGRVTVNGIVVTKPAMKVSASD 46


>gi|315045031|ref|XP_003171891.1| 37S ribosomal protein NAM9 [Arthroderma gypseum CBS 118893]
 gi|311344234|gb|EFR03437.1| 37S ribosomal protein NAM9 [Arthroderma gypseum CBS 118893]
          Length = 475

 Score = 44.0 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 3/116 (2%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTI 339
             E  R ++ +       + ++  E   +      A+ A   +              P +
Sbjct: 54  HGEQVRESQWERMFSRRLRAVVPMEPADLSRNDGAAQAAGRGSGLVERGKTRQVPETPYM 113

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++   + R + +   I +A FA+ST +AR+ +    + +N   +      +   D
Sbjct: 114 LMTFAPLERRLDV--AIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYLLNPGD 167


>gi|305680216|ref|ZP_07403026.1| tryptophan--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305660836|gb|EFM50333.1| tryptophan--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 346

 Score = 44.0 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 75/243 (30%), Gaps = 31/243 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +       G   T+ S H G+    +     LQ T ++    +    +I  D        
Sbjct: 11  EKTQRILSGIQPTSDSYHLGNYLGALKQWIDLQDT-YEAFYFIPDLHAITVD-------- 61

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                +E++             +  G     A +          +   +   +  F   +
Sbjct: 62  --QDPKELRARTISGAAQL---LALGIDPDKAALFVQSHVPEHAQLAWVFTCLTGFGEAS 116

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +     S   + Y +L A D + L +     +   G DQ  ++     
Sbjct: 117 RMTQFKD-KSTKQGADRTSAGLYAYPMLMAADIL-LYRPEIVPV---GEDQRQHLELTRT 171

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L ER      + F +  P + T S           KM K+ S    L   +  P    + 
Sbjct: 172 LAERFNSRYQETFPVPEPFIPTGSAKIYDLQDPTAKMSKSTSNPKGLINLLDDPKISTKR 231

Query: 261 WRN 263
            ++
Sbjct: 232 IKS 234


>gi|225020581|ref|ZP_03709773.1| hypothetical protein CORMATOL_00588 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946527|gb|EEG27736.1| hypothetical protein CORMATOL_00588 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 346

 Score = 44.0 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 75/243 (30%), Gaps = 31/243 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +       G   T+ S H G+    +     LQ T ++    +    +I  D        
Sbjct: 11  EKTQRILSGIQPTSDSYHLGNYLGALKQWIDLQDT-YEAFYFIPDLHAITVD-------- 61

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                +E++             +  G     A +          +   +   +  F   +
Sbjct: 62  --QDPKELRARTISGAAQL---LALGIDPDKAALFVQSHVPEHAQLAWVFTCLTGFGEAS 116

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +     S   + Y +L A D + L +     +   G DQ  ++     
Sbjct: 117 RMTQFKD-KSTKQGADRTSAGLYAYPMLMAADIL-LYRPEIVPV---GEDQRQHLELTRT 171

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L ER      + F +  P + T S           KM K+ S    L   +  P    + 
Sbjct: 172 LAERFNSRYQETFPVPEPFIPTGSAKIYDLQDPTAKMSKSTSNPKGLINLLDDPKISTKR 231

Query: 261 WRN 263
            ++
Sbjct: 232 IKS 234


>gi|257414220|ref|ZP_04745631.2| tryptophan--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257200809|gb|EEU99093.1| tryptophan--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 368

 Score = 44.0 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 70/222 (31%), Gaps = 32/222 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +       +++
Sbjct: 19  PTGK-LHVGHYVGSLKRRVELQNSGEYDKIFIMIADAQAL---------TDNADNPAKVR 68

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            NI ++  +    +     K+D  + +  T L  + +  +     S    N  +  E   
Sbjct: 69  SNIMEV-ALDYLSVGIDPAKSDIFIQSYVTELTELTFYYMNLVTVSRLQRNPTVKSEIQM 127

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  +     
Sbjct: 128 RNFETSIPVGF--FCYPISQAADITAFH----ATTVPVGEDQMPMLEQTKEIVHKFNAVY 181

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKE 250
              LT P +             T    KM K+L   I+L++ 
Sbjct: 182 GETLTDPQILLPENKACLRLPGTDGKAKMSKSLGNCIYLSEP 223


>gi|332671379|ref|YP_004454387.1| tryptophanyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332340417|gb|AEE47000.1| tryptophanyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 354

 Score = 44.0 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 79/244 (32%), Gaps = 40/244 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSF---RDESR 91
             + G   T+ SL  G+    +   W  LQ   H  I  +    ++  +P     RD +R
Sbjct: 7   RIFSGMQPTSDSLQLGNYLGALT-QWVALQDE-HDAIYCVVDLHALTVNPDPAVLRDRTR 64

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R          ++  + I             A       WL        L     F    
Sbjct: 65  RTAAQFLAAG-VDPARSILFVQSHVPEHAELA-------WL--------LSCQTGFGEAG 108

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +  +  +   F Y +L A D +     YD  L   G DQ  ++    D
Sbjct: 109 RMTQFKD-KSSKQGSEGTTVGLFTYPVLMAADIL----LYDTNLVPVGEDQRQHLELSRD 163

Query: 212 LGERLKT---PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
           L +RL     P    +  P +  A+           KM K+      L + +  P    +
Sbjct: 164 LAQRLNQRFGPGTAVVPDPHIVKATAKIYDLQDPTSKMSKSAESPNGLIELLDDPKVVAK 223

Query: 260 YWRN 263
             R+
Sbjct: 224 RIRS 227


>gi|223940279|ref|ZP_03632137.1| tryptophanyl-tRNA synthetase [bacterium Ellin514]
 gi|223891046|gb|EEF57549.1| tryptophanyl-tRNA synthetase [bacterium Ellin514]
          Length = 321

 Score = 44.0 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 32/218 (14%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +  +LH G+   +M     LQ+ G +    +    S+     F  E RR       
Sbjct: 6   GIQPSG-ALHLGNYFGMMRPAIELQERG-EAYYFIANYHSMT--SLFEAEPRRKNTLDVA 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + +                ++D   +    W+           + +   +  +    S 
Sbjct: 62  LDFLACG---LDPKKSVFFKQSDVPEVTELAWI-----------LTTLTPMGLLERCTSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL------- 212
           + +L R  S     F Y +L A D +     YD  +   G DQ  ++    D+       
Sbjct: 108 KDKLARGISPYHGLFAYPVLMAADIL----IYDSNIVPVGKDQKQHVEVTRDIAVKFNEQ 163

Query: 213 --GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                +         + L+    G KM K+    I + 
Sbjct: 164 YGQTFVIPEPQIREETALIPGTDGQKMSKSYGNTIEIF 201


>gi|209966844|ref|YP_002299759.1| RNA pseudouridine synthase, putative [Rhodospirillum centenum SW]
 gi|209960310|gb|ACJ00947.1| RNA pseudouridine synthase, putative [Rhodospirillum centenum SW]
          Length = 551

 Score = 44.0 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            H +  P  + S  +   G  +   + +AG   S  +A R +    + +N  ++    + 
Sbjct: 12  DHPEDGPDATASAPDDQGGERISKRLSRAGLC-SRRDAERWIAEGRVSVNGRVLDTPAVT 70

Query: 391 IKLQDFD 397
           ++  D  
Sbjct: 71  VRPGDRI 77


>gi|154287040|ref|XP_001544315.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407956|gb|EDN03497.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 453

 Score = 44.0 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 2/116 (1%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  +   +       E A   +         +   P + 
Sbjct: 97  HGEQVRESQWEKMFSRRLRSVVPMDANYLARNDGSFESAGRGSGLEGVGPRRAPLTPHMQ 156

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +      +   D 
Sbjct: 157 MTFAPLERRLDV--AIFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNSGDL 210


>gi|302510661|ref|XP_003017282.1| hypothetical protein ARB_04161 [Arthroderma benhamiae CBS 112371]
 gi|291180853|gb|EFE36637.1| hypothetical protein ARB_04161 [Arthroderma benhamiae CBS 112371]
          Length = 526

 Score = 43.6 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 36/116 (31%), Gaps = 1/116 (0%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  +   +         A   +          + +P   
Sbjct: 64  HGEQVRESQWERMFSRRLRAVVPMDPFDLARNDGSKNAAGRGSGMDQGGREDGRQVPDTP 123

Query: 341 ISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                 +     L   I +A FA+ST +AR+ +    + +N   +      +   D
Sbjct: 124 YMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYLLNPGD 179


>gi|298492205|ref|YP_003722382.1| hemolysin A ['Nostoc azollae' 0708]
 gi|298234123|gb|ADI65259.1| hemolysin A ['Nostoc azollae' 0708]
          Length = 270

 Score = 43.6 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 19/31 (61%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           L+V  G + S  +A+R +++  +++N  +I 
Sbjct: 9   LLVDLGLSPSRQQAQRLIQAGEVRVNQQVID 39


>gi|269926359|ref|YP_003322982.1| tryptophanyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790019|gb|ACZ42160.1| tryptophanyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 348

 Score = 43.6 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 76/254 (29%), Gaps = 29/254 (11%)

Query: 21  ISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +S   ++    SQ        G   T   LH G+    +  +   +  H     +    +
Sbjct: 3   VSELEKVPANLSQAPKSRVLSGIMPTGD-LHIGNYIGAIKNWVAMQYEHDSFFCIVNMHA 61

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
                        +   Q+ +E  EK + + + +I  G     + +          +   
Sbjct: 62  -------------ITTPQDPKELYEKTREVAALYIACGVDPKVSTIFVQSHVPAHTELCW 108

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF-VELAKNYDCRLQMG 198
           +L  I     + RM  F+         +  S   F+Y +LQA D  +             
Sbjct: 109 ILNCIAPMGWLERMTQFK--EKSKGDRERSSVGLFDYPVLQAADILLYGNVPPVPLYVPV 166

Query: 199 GSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASG---------TKMGKTLSGAIWL 247
           G DQ  ++    DL ER         A+  P +               KM K+       
Sbjct: 167 GEDQKQHLELARDLAERFNRLFGDTLAIPEPYIPKYGARVMGLDDPTKKMSKSEKSRYHA 226

Query: 248 NKEMTSPYNFWQYW 261
            + + SP +  +  
Sbjct: 227 IRLLDSPDDIRKKI 240


>gi|62185530|ref|YP_220315.1| tryptophanyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|62148597|emb|CAH64369.1| putative tryptophanyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 345

 Score = 43.6 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 45/339 (13%), Positives = 98/339 (28%), Gaps = 44/339 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH    +     LQ    +    ++    ++         +
Sbjct: 2   NKKTRVLTGDRPTGK-LHLGHWVGSIKNRLDLQNNPAYDCFFIVADLHTL--------TT 52

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R         +N   I  + + ++  G     + +          +  +L        S+
Sbjct: 53  RIRKEQVLNVDN--HIYEVLADWLSVGIDPNKSTIYLQSAI---PEIYELHLLFSMLISI 107

Query: 151 NRMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           NR++      E  ++    E  LSF    Y +LQ+ D +        +L   G D   +I
Sbjct: 108 NRIMGIPSLKEMAKNASIDEGGLSFGLVGYPVLQSADIL----LAKAQLVPVGKDNEAHI 163

Query: 207 ICGIDLGE---------RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
               D+             +   L    + L+      KM K+ + AI+L+ +  +  + 
Sbjct: 164 ELTRDIARNFNRLYGEIFPEPETLQGELTSLVGIDGQGKMSKSANNAIYLSDDDATIKDK 223

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
            +           +     T   +              N+ +     E     + +   +
Sbjct: 224 IRKMYT-----DPNRIHATTPGRVEGNPLFIYHDIFNPNKEEV----EEFKTRYRQGCIK 274

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
                A    ++ +  Q  P      + +++   L   +
Sbjct: 275 DVEIKARLAEELILFLQ--PLKEKRAELLTKPQALQDAL 311


>gi|326634430|pdb|3P0H|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
           Fisetin, Cubic Crystal Form
 gi|326634431|pdb|3P0H|B Chain B, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
           Fisetin, Cubic Crystal Form
 gi|326634432|pdb|3P0I|A Chain A, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
           Tyrosinol, Cubic Crystal Form
 gi|326634433|pdb|3P0I|B Chain B, Leishmania Major Tyrosyl-Trna Synthetase In Complex With
           Tyrosinol, Cubic Crystal Form
          Length = 690

 Score = 43.6 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 49/370 (13%), Positives = 101/370 (27%), Gaps = 35/370 (9%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHK 69
           R    +     EL  L  +   +  Y G++ +    H          +         G +
Sbjct: 19  RSVGEECIQESELRNLIEKKPLIRCYDGFEPSGRX-HIAQGIFKAVNVNKCTA---AGCE 74

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            +  +    ++  D                +  IE  K       K     +   + ++ 
Sbjct: 75  FVFWVADWFALXNDKVG---GELEKIRIVGRYLIEVWKAAGXDXDKVLFLWSSEEITSHA 131

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
                  Y   + +IG   ++ R+   +      K E +L+  +  Y + Q  D   L  
Sbjct: 132 D-----TYWRXVLDIGRQNTIARI--KKCCTIXGKTEGTLTAAQVLYPLXQCCDIFFLK- 183

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                +   G DQ        +  + +    K   L+   L      +   + S      
Sbjct: 184 ---ADICQLGLDQRKVNXLAREYCDLIGRKLKPVILSHHXLAGLKQGQAKXSKSDPDSAI 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               +  +  +  R      V   A  +T       D  A +   + N         +  
Sbjct: 241 FXEDTEEDVARKIRQAYCPRVKQSASAIT-------DDGAPVATDDRNPVLDYFQCVVYA 293

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
                   +    A  E  + +  S  +   ++    +     LL  + +     S  EA
Sbjct: 294 RPGAAATIDGTTYATYEDLEQAFVSDEVSEDALKSCLIDEVNALLEPVRQH--FASNEEA 351

Query: 369 RRHLKSNAIK 378
              L+  A+K
Sbjct: 352 HELLE--AVK 359


>gi|291539714|emb|CBL12825.1| tryptophanyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 361

 Score = 43.6 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 32/222 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +       +++
Sbjct: 12  PTGK-LHVGHYVGSLKRRVELQNSGEYDKIFIMIADAQAL---------TDNADNPAKVR 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            NI ++  +    +     K++  + +  T L  + +  +     S    N  +  E   
Sbjct: 62  SNIMEV-ALDYLSVGIDPAKSNIFIQSYVTELTELTFYYMNLVTVSRLQRNPTVKSEIQM 120

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  +     
Sbjct: 121 RNFETSIPVGF--FCYPISQAADITAFH----ATTVPVGEDQMPMLEQTKEIVHKFNAVY 174

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKE 250
              LT P +             T    KM K+L   I+L++ 
Sbjct: 175 GETLTDPQILLPENKACLRLPGTDGKAKMSKSLGNCIYLSEP 216


>gi|323340518|ref|ZP_08080773.1| tryptophan--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092062|gb|EFZ34679.1| tryptophan--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 340

 Score = 43.6 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 97/348 (27%), Gaps = 53/348 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q TG + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYVGSLKNRVEMQNTGKYTPYIMIADQQAL------TDNARDPEKIKNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 65  QVALDY----LAVGLDPKKSTIFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---- 217
             +R     F  F Y + QA D       Y       G DQ   +    ++         
Sbjct: 121 NFERSIPAGF--FTYPVSQAADITAFKAKY----VPVGDDQEPMLEQAREIVRSFNSIYG 174

Query: 218 ---------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------ 262
                     PK  +   P L      KM K+L   I+L+ +  +               
Sbjct: 175 EVLVEPEGVFPKKGSGRLPGL--DGNAKMSKSLGNCIYLSDDADTLKKKVMSMYTDPNHI 232

Query: 263 ------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK-KIIATEITTMVHGREE 315
                  ++   V ++     +      D   + Q   + + K K    E+     G   
Sbjct: 233 HVEDPGQVEGNMVFAYLDIFDSDKEHVADLKERYQAGGLGDVKIKRYLNEVLEAELGPIR 292

Query: 316 AEKAATA------AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
             +A              D S  +  +   ++ +   + G+    ++ 
Sbjct: 293 ERRAEFEKDIPAVYQMLKDGSDKANEVANQTLEEVRAAIGVNYFDILK 340


>gi|152993508|ref|YP_001359229.1| tryptophanyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425369|dbj|BAF72872.1| tryptophanyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 319

 Score = 43.6 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 32/223 (14%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    M  +  LQ+  H+  + +    S+    S  D     +
Sbjct: 1   MRVLTGIQASGK-LHIGNYFGAMKPMVELQEE-HELFTFIANYHSL---TSSTDAE--TL 53

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           R   ++  ++ +             ++    +    W+           +  F  +  + 
Sbjct: 54  RQNTVEAAVDYLAIGIDPEKTTFWVQSHVPEVLELYWI-----------LSKFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +    S   F+Y +L A D +     YD      G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGIPASHALFSYPVLMAADIL----LYDVEKVPVGKDQIQHVEMTRDIAI 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLN 248
           +         T P          +    G KM K+   AI L 
Sbjct: 159 KFNNEYGELFTLPEHMVAEEVATVPGIDGQKMSKSYGNAIDLF 201


>gi|85708946|ref|ZP_01040012.1| S4 domain protein [Erythrobacter sp. NAP1]
 gi|85690480|gb|EAQ30483.1| S4 domain protein [Erythrobacter sp. NAP1]
          Length = 260

 Score = 43.6 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           MPT     ++   G  +  L+ +AG   S  E  R +    I +N+ ++      + 
Sbjct: 1   MPTNPKQSEDRPEGDRIAKLLARAG-VASRREIERMIADGRITLNDKVVETPATFLT 56


>gi|163841979|ref|YP_001626384.1| tryptophanyl-tRNA synthetase [Renibacterium salmoninarum ATCC
           33209]
 gi|162955455|gb|ABY24970.1| tryptophanyl-tRNA synthetase [Renibacterium salmoninarum ATCC
           33209]
          Length = 346

 Score = 43.6 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 66/218 (30%), Gaps = 37/218 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH    +     LQ+ G + I ++      T+   D +   + R  +    +
Sbjct: 33  PTGP-LHLGHYFGSLAERARLQRLGVEIIVVIADYQVITAR--DTAG--DIRENVHEVVL 87

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                 +    S+   +                       L+    S  +   +    +V
Sbjct: 88  DYLAAGMDPEQSTIFTHSAV---------------PALNQLISPFLSLVTEAELRRNPTV 132

Query: 160 RSRL-KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--- 215
           +S      ++LS L   Y + QA D +         L   G D   ++     +  R   
Sbjct: 133 KSESAASGRALSGLLLTYPVHQAADIL----FCRANLVPVGKDNLPHVELTRSIARRFND 188

Query: 216 -----LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                   P+     +P L    G KM K+   +I L 
Sbjct: 189 RYSEVFPIPEAILTQTPELPGLDGRKMSKSYRNSIPLR 226


>gi|293375831|ref|ZP_06622100.1| tryptophan--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325841032|ref|ZP_08167241.1| tryptophan--tRNA ligase [Turicibacter sp. HGF1]
 gi|292645539|gb|EFF63580.1| tryptophan--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490098|gb|EGC92441.1| tryptophan--tRNA ligase [Turicibacter sp. HGF1]
          Length = 332

 Score = 43.6 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 93/306 (30%), Gaps = 34/306 (11%)

Query: 44  LTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            + + L  G+    +     LQ   H+    +    + I  P  R E R+          
Sbjct: 10  PSGT-LTIGNYLGALKNFVKLQDE-HECFFFIVDQHA-ITVPQDRLELRK---------- 56

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRS 161
             KIK + + ++  G     A +          +   +L    S   + RM    +  + 
Sbjct: 57  --KIKELTALYLACGLDPEKATIFVQSEVPAHTQLAWMLTCNTSMGELERMTQFKDKSQK 114

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TP 219
           +  + Q +    F Y +L A D +     YD      G DQ  ++    DL ER      
Sbjct: 115 QSAKGQGIGVGLFMYPVLMAADIL----LYDVDFVPVGDDQKQHLELTRDLAERFNNRFG 170

Query: 220 KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
           + F +  PL+       M           K   S  N   +    D+ +V+    +    
Sbjct: 171 ETFKIPEPLIAKTGARIMSLQE----PTKKMSKSDDNARNFILMTDEPNVIRKKIKSAMT 226

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
               I            E K  I+  +        E+  +  A  +          +  +
Sbjct: 227 DSDGI-------IAFDRENKPGISNLLEIYSTITGESIDSLVARYDGAGYGTFKSDLAEV 279

Query: 340 SISKDE 345
            +++ E
Sbjct: 280 VVAELE 285


>gi|306822649|ref|ZP_07456027.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           dentium ATCC 27679]
 gi|309800961|ref|ZP_07695093.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           dentium JCVIHMP022]
 gi|304554194|gb|EFM42103.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           dentium ATCC 27679]
 gi|308222497|gb|EFO78777.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           dentium JCVIHMP022]
          Length = 252

 Score = 43.6 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++  G + S ++A+R +    + +N  ++S    ++   D  
Sbjct: 15  ALLDRGLSDSRSKAQRLIVQGKVSVNGVVVSKASAKVSDDDVI 57


>gi|171742791|ref|ZP_02918598.1| hypothetical protein BIFDEN_01905 [Bifidobacterium dentium ATCC
           27678]
 gi|171278405|gb|EDT46066.1| hypothetical protein BIFDEN_01905 [Bifidobacterium dentium ATCC
           27678]
          Length = 252

 Score = 43.6 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++  G + S ++A+R +    + +N  ++S    ++   D  
Sbjct: 15  ALLDRGLSDSRSKAQRLIVQGKVSVNGVVVSKASAKVSDDDVI 57


>gi|261339101|ref|ZP_05966959.1| hypothetical protein ENTCAN_05314 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318937|gb|EFC57875.1| tryptophan--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 334

 Score = 43.6 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 84/324 (25%), Gaps = 40/324 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              T   G   T   LH GH    +     LQ+T H    L+     +  + S   + R 
Sbjct: 2   NKQTILTGDRPTGP-LHLGHFVGSLRQRVALQQT-HNQFVLIADLQGLTDNGSNPQKIRD 59

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +           I              T   + +    L  +  + +     +    N 
Sbjct: 60  NIPEVLADYLAAGI----------DPNLTTICLQSALPALAELTMLYMNIVTVARVERNP 109

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + F    Y I QA D               G DQ   I    ++
Sbjct: 110 TVKNEIAQKGFARSLPVGF--MAYPISQAADITAFKAEC----VPVGDDQLPMIEQTNEI 163

Query: 213 GERL----------KTPKLFALTSPLLTTASGTKMGKTLSGA-------IWLNKEMTSPY 255
             ++              + + TS L       KM K+L            +++ +++ Y
Sbjct: 164 VHKMNSLLPTPVLRHCKAMLSDTSRLPGIDGSAKMSKSLGNTLHLSASEETIHRAVSAMY 223

Query: 256 NFWQYWRNIDDADVV---SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
              ++ +  D   +     F       P        K   +      ++   E       
Sbjct: 224 TDPKHLKVSDPGQIEGNVVFTYLDAFHPDKAKVAAMKAHYQAGGLGDRVCKNE-LEACLQ 282

Query: 313 REEAEKAATAAMECFDMSIHSQHM 336
              A      AM   D       +
Sbjct: 283 ELIAPMRERRAMYMQDKGELMAML 306


>gi|94270214|ref|ZP_01291679.1| Tryptophanyl-tRNA synthetase, class Ib [delta proteobacterium
           MLMS-1]
 gi|93450895|gb|EAT01906.1| Tryptophanyl-tRNA synthetase, class Ib [delta proteobacterium
           MLMS-1]
          Length = 322

 Score = 43.6 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 89/338 (26%), Gaps = 42/338 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+   +M         H   + +    ++                 + +
Sbjct: 6   GIQPSGQ-LHIGNYFGMMKPMIANMAEHDLYAFIVDLHAL-------------TSVHDAK 51

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             +       + F+  G                  +  +L   +     +  +    S +
Sbjct: 52  RLVGGTLEAAADFLALGLDPRRCTFWVQSD---VPEVTELTWVLSCVTPMGLLERCHSYK 108

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            +  R  + S   F Y +L A D + L +     +   G DQ  ++    D+  +     
Sbjct: 109 DKTARGLAASHGLFAYPVLMAADIL-LYQGQRVPV---GKDQQQHLEVARDIALKFNH-- 162

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
            F  T  L   A    +         L+ +  S          +D   +      + T  
Sbjct: 163 TFGDTFVLPEAAIEDNLATI----PGLDGQKMSKSYDNTIPIFLDAKALKKRVMAIVTDS 218

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
                     +    N  K     E    V G      A    ++   + I  ++     
Sbjct: 219 TPVEQPKDPDKCNLYNIYKLFAPPERLAEVRGLYVNGGAMYGKIKLELVDILWEYFSQAR 278

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
             + E         L+   G      + R  L+  A+K
Sbjct: 279 QRRQE---------LLADPG------QLREILRQGAVK 301


>gi|46445804|ref|YP_007169.1| tryptophanyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399445|emb|CAF22894.1| putative tryptophanyl-tRNA synthetase (=tryptophan-tRNA ligase)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 353

 Score = 43.6 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 73/243 (30%), Gaps = 31/243 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                  G   T   LH GH    +      +  ++   ++    ++   PS        
Sbjct: 3   EKKRILTGDRPTGL-LHLGHYVGSLKNRIALQDSYECYFIIADLHTLTTKPS-------- 53

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
              +EI +  E ++ +   ++  G     + +             ++        S+NR+
Sbjct: 54  --KEEILQVRENVRTMVIDYLACGIDPKKSTIYLQSAI---PAVYEMNLIFEMLISLNRL 108

Query: 154 LS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +      E  R+      ++ F    Y ILQ  D +         L   G D   +I   
Sbjct: 109 IGLPSLKEMARNAHLDNDNMPFGLIGYPILQTADILMPK----AHLVPVGKDNEAHIELA 164

Query: 210 IDLGERLKT---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
            D+  R              L + T  L+ T    KM K+    I+L  +  S     + 
Sbjct: 165 RDIARRFNQFYGDVFPLPEVLLSQTPTLVGTDGKGKMSKSAGNTIFLADDAKSVEKKVKG 224

Query: 261 WRN 263
              
Sbjct: 225 MFT 227


>gi|288803207|ref|ZP_06408641.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           melaninogenica D18]
 gi|288334248|gb|EFC72689.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           melaninogenica D18]
          Length = 514

 Score = 43.6 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 1/96 (1%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             +A    +     +          + +  + L   +  AG   S  EA   + S A+ +
Sbjct: 249 QHSADYDPNAKYSLKKRIEYKEENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTV 307

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           N  ++     ++   D     +  +S  KK +++ +
Sbjct: 308 NGEVVKELGSKVLRTDEVYFQDKLVSLEKKVYVLLN 343


>gi|295109334|emb|CBL23287.1| tryptophanyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 356

 Score = 43.6 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 61/197 (30%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGK-LHVGHYVGSLKERVKLQNSGDYDEVYIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     +    N  +  E   
Sbjct: 61  QNIIQV-ALDYLACGIDPAKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +       G DQ   I    ++  +  T  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFRATH----VPVGEDQMPMIEQCKEIVHKFNTVY 173

Query: 221 LFALTSPLLTTASGTKM 237
              LT P +   S    
Sbjct: 174 GETLTDPKIVLPSNKAC 190


>gi|282163383|ref|YP_003355768.1| hypothetical protein MCP_0713 [Methanocella paludicola SANAE]
 gi|282155697|dbj|BAI60785.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 215

 Score = 43.6 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-------LQDFDSTGNIKLS 405
           +V  G   S + A+R ++   +K++   +     +++         +    G  KL 
Sbjct: 7   LVSEGLVPSRSRAKRLIEKGQVKVDGKAVLKPSQKVEYGRKVAIEGEDMPEGYFKLK 63


>gi|222444552|ref|ZP_03607067.1| hypothetical protein METSMIALI_00164 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434117|gb|EEE41282.1| hypothetical protein METSMIALI_00164 [Methanobrevibacter smithii
           DSM 2375]
          Length = 365

 Score = 43.6 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 115/358 (32%), Gaps = 37/358 (10%)

Query: 6   SDFLSI------LSERGFIHQISNPRELDILCSQGVVTAYIG-YDLTASSLHAGHLTQLM 58
           SD +        L +RG I    +  +++ L ++    A +G    +   +H GH   + 
Sbjct: 28  SDLIDDVENPHRLMKRGVIFGHRDFDKVNNLINKKEDFAVVGGMMPSGQ-MHIGHKMVVD 86

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L W Q  G     L+    S          +R M   +     +       +++I  G 
Sbjct: 87  QLKWYQDKGAMLSILIADLESY--------AARDMSFEKARDIAVN---EYLTNYIALGL 135

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +   +N      +    DL  +     + N +      ++     QS +       +
Sbjct: 136 DLEE-DNVNVYLQSKNDTLRDLAFKASKKTNFNEL------KAIYGFTQSTNIAHIQAPL 188

Query: 179 LQAYDFV-----ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLL 229
           +Q  D +     E        + +G  DQ  +I    D+  +L          +     L
Sbjct: 189 VQVADILLPQLEEFGGPKRVVVPVG-VDQDPHIRLTRDIAHKLNDEYGFIPPSSTYHRFL 247

Query: 230 TTASGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
           T  SG KM  +  S AI+LN++  +     +  +      +    +    +    I  M 
Sbjct: 248 TGLSGDKMSSSKPSTAIYLNEDSETAAKKVKTAKTGGRESLKEQQELGGQVDNCVIYEMF 307

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
                + ++  + I  E         + +  A+  M      IH +      I+ + +
Sbjct: 308 VYHLIDDDKELEKIRHECLDGSLRCGDCKAKASELMVEMFDEIHDKQDEAREIANNLI 365


>gi|120437575|ref|YP_863261.1| tryptophanyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579725|emb|CAL68194.1| tryptophanyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 322

 Score = 43.6 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 35/215 (16%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSI--IGDPSFRDESRRMMRSQEIQENIEK 105
           H G+L   +M    +     +     +    S+  I D     E+ R          +  
Sbjct: 15  HLGNLLGAIMPAIEMANQPDNDSFIFIADMHSLTQIKD----AETLRQNTYSVAATWLAC 70

Query: 106 IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
              I  S       ++D   +   +W            +  FF   R+    S + +  R
Sbjct: 71  GLDIERSVF---YRQSDIPQVTELSWY-----------LSCFFPYQRLTLAHSFKDKADR 116

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
            + ++   F+Y +L A D +     YD  +   G DQ  +I    D+  R          
Sbjct: 117 LEDINSGLFSYPMLMAADIL----LYDAEIVPVGKDQLQHIEMTRDVASRFHAKMGEVFV 172

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEM 251
            P          +    G KM K+    I + +  
Sbjct: 173 MPEANVQKDSMYVPGTDGAKMSKSKENTINIFQTD 207


>gi|313125091|ref|YP_004035355.1| tryptophanyl-tRNA synthetase [Halogeometricum borinquense DSM
           11551]
 gi|312291456|gb|ADQ65916.1| tryptophanyl-tRNA synthetase [Halogeometricum borinquense DSM
           11551]
          Length = 538

 Score = 43.6 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 70/231 (30%), Gaps = 25/231 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R +      G       G+  T    H GH      + W Q+ G   
Sbjct: 69  LMRRGVIFGHRDYRPVAEAMRDGDPFAVLSGFMPTGDP-HIGHKLVFDEIIWHQQQG--- 124

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
               G    +I D           R    +E  +  +    S +  G    +  +     
Sbjct: 125 ----GDAYGLIAD-----LEAHSARGMTWEEIDKHARDYLLSLLALGFDPEEGELYRQSD 175

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-LAK 189
              + +  DL  E+GS  + +         +    +   +      ++ Q  D +     
Sbjct: 176 ---NRQLQDLSFELGSKANFSE------FEAIYGFDSGTNVSHLQSVVTQMADILYPQLD 226

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF-ALTSPLLTTASGTKMGK 239
                +   G DQ  ++    DL  R++  K+  A  S  LT A    +  
Sbjct: 227 EPKPTVIPVGPDQDPHVRLARDLAARMRFFKVTEAYASFELTDAERDLVAS 277


>gi|270295727|ref|ZP_06201927.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D20]
 gi|317479868|ref|ZP_07938986.1| S4 domain-containing protein [Bacteroides sp. 4_1_36]
 gi|270273131|gb|EFA18993.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D20]
 gi|316903977|gb|EFV25813.1| S4 domain-containing protein [Bacteroides sp. 4_1_36]
          Length = 494

 Score = 43.6 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 15/154 (9%), Positives = 42/154 (27%), Gaps = 4/154 (2%)

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII---ATEITTMVHGREEAEKAAT 321
                  +  R  +       R            +              +    +     
Sbjct: 171 SYNTDRPYRPRYNSEDGDRPQRPRYNNEGGDRPYRPRFNSGGGRPGGYGNRDSYSRPVRR 230

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           +A    +     +          + +  + L   +  AG   S  EA   + +  + +N 
Sbjct: 231 SADYDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNG 289

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +++    +IK  D     +  +S  +K +++ +
Sbjct: 290 EVVTELGTKIKRGDEVKFHDQTVSIERKIYVLLN 323


>gi|224013303|ref|XP_002295303.1| probable tryptophanyl tRNA synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220969026|gb|EED87369.1| probable tryptophanyl tRNA synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 405

 Score = 43.6 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L     R       +  ++    +       Y G   ++S++H GHL   +   WLQK  
Sbjct: 47  LHRFLRREIFFSHRDIEKISKEPTGPCPFYLYTGRGPSSSAMHLGHLVPFLFTAWLQKAF 106

Query: 68  HKPISL 73
             P+ +
Sbjct: 107 RCPLVI 112


>gi|218128458|ref|ZP_03457262.1| hypothetical protein BACEGG_00026 [Bacteroides eggerthii DSM 20697]
 gi|317475716|ref|ZP_07934975.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
 gi|217989349|gb|EEC55662.1| hypothetical protein BACEGG_00026 [Bacteroides eggerthii DSM 20697]
 gi|316908099|gb|EFV29794.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
          Length = 364

 Score = 43.6 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 88/325 (27%), Gaps = 35/325 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  M   ++++
Sbjct: 13  PTGR-LHIGHYVGSLRRRVELQNSGLYDKTFVFIADAQAL---------TDNMENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPAKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMIEQAREIVRRFNFIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
              L  P +             T    KM K+L   I+L+          +      +  
Sbjct: 176 GDTLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADEVQKKVKSMYTDPNHL 235

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            V    ++    +                     + E     + R               
Sbjct: 236 RVQDPGKIEGNTVFTYLDAFCRPEHFERYLPDYPSLEELKAHYQRGGLGDMKVKGFL--- 292

Query: 329 MSIHSQHMPTISISKDEVSRGMGLL 353
            +I  + +  I   + E  + +  +
Sbjct: 293 NNIMQETLEPIRNRRKEFEKDIPAI 317


>gi|329113791|ref|ZP_08242562.1| Putative RNA pseudouridine synthase [Acetobacter pomorum DM001]
 gi|326696801|gb|EGE48471.1| Putative RNA pseudouridine synthase [Acetobacter pomorum DM001]
          Length = 258

 Score = 43.6 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           G  +   + ++G   S  +A R ++ N I++N   +++    +   D 
Sbjct: 7   GERIAKWLARSG-VASRRDAERMIEENRIRLNGQPVTHPATFVTNGDI 53


>gi|295687634|ref|YP_003591327.1| RNA-binding S4 domain-containing protein [Caulobacter segnis ATCC
           21756]
 gi|295429537|gb|ADG08709.1| RNA-binding S4 domain protein [Caulobacter segnis ATCC 21756]
          Length = 426

 Score = 43.6 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   + +AG   S  E  R +++  + IN  +++   +++K  DF 
Sbjct: 24  PGERVAKALARAG-VASRREVERLIEAGRVAINGKVLTTPAIKVKPGDFL 72


>gi|258543615|ref|YP_003189048.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634693|dbj|BAI00669.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637749|dbj|BAI03718.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640803|dbj|BAI06765.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643858|dbj|BAI09813.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646913|dbj|BAI12861.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649966|dbj|BAI15907.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652956|dbj|BAI18890.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256656010|dbj|BAI21937.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 258

 Score = 43.6 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           G  +   + ++G   S  +A R ++ N I++N   +++    +   D 
Sbjct: 7   GERIAKWLARSG-VASRRDAERMIEENRIRLNGQPVTHPATFVTNGDI 53


>gi|312142411|ref|YP_003993857.1| RNA-binding S4 domain protein [Halanaerobium sp. 'sapolanicus']
 gi|311903062|gb|ADQ13503.1| RNA-binding S4 domain protein [Halanaerobium sp. 'sapolanicus']
          Length = 72

 Score = 43.6 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD----STGNIK 403
             + L   +  A  A S  EA+  ++   + +N  + +     +K+ D      +     
Sbjct: 9   DTINLDQFLKWANIAMSGGEAKYLIQEGEVTVNGEVETQRGKTLKVGDVVSLTGNDKKYI 68

Query: 404 LSFG 407
           +S G
Sbjct: 69  VSRG 72


>gi|153809643|ref|ZP_01962311.1| hypothetical protein RUMOBE_00024 [Ruminococcus obeum ATCC 29174]
 gi|149833821|gb|EDM88901.1| hypothetical protein RUMOBE_00024 [Ruminococcus obeum ATCC 29174]
          Length = 356

 Score = 43.6 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKERVKLQNSGDYDEVYIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     +    N  +  E   
Sbjct: 61  QNIIQV-ALDYLACGIDPAKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKAEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +       G DQ   +    ++  +  T  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFRATH----VPVGEDQLPMLEQCKEIVHKFNTVY 173

Query: 221 LFALTSPLLTTASGTKM 237
              LT P +   S    
Sbjct: 174 GETLTDPKIVLPSNKAC 190


>gi|220929165|ref|YP_002506074.1| pseudouridine synthase [Clostridium cellulolyticum H10]
 gi|219999493|gb|ACL76094.1| pseudouridine synthase [Clostridium cellulolyticum H10]
          Length = 235

 Score = 43.6 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKL 404
           G+ L   I  AG   S   A   +K   + +NN+++ +    +   DF       +K+
Sbjct: 3   GIRLQKFIAHAG-VASRRTAEEMIKQGRVAVNNTVVQDMGFTVSNDDFVTVDGKPVKI 59


>gi|222480274|ref|YP_002566511.1| aminoacyl-tRNA synthetase class Ib [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453176|gb|ACM57441.1| aminoacyl-tRNA synthetase class Ib [Halorubrum lacusprofundi ATCC
           49239]
          Length = 534

 Score = 43.6 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 71/244 (29%), Gaps = 25/244 (10%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I        +     +     A  G+  T    H GH      + W Q+ G   
Sbjct: 59  LMRRGVIFGHREYDAVAEAMANDEPFAALSGFMPTGDP-HIGHKLVFDEIIWHQQQG--- 114

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
               G    +I D           R     E  E  +    S +  G    +  +     
Sbjct: 115 ----GDAFGLIAD-----LEAHSARGMSWDEIDEHARNYLLSLLALGFDAEEGELYRQSD 165

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
              + +  DL  E+GS  + +         +    +   +      +I Q  D +     
Sbjct: 166 ---NREVQDLGFELGSKANFSE------FEAIYGFDGETNISHMQSVITQTADILYPQLV 216

Query: 191 YDCRLQM--GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            + +  +   G DQ  ++    DL  R++  K+    +         ++ +    A+   
Sbjct: 217 DEPKPTVIPVGPDQDPHVRLTRDLATRVRYFKVTEAFASFELNDDERQLVRAAYDALAAG 276

Query: 249 KEMT 252
            E  
Sbjct: 277 DESD 280


>gi|120402567|ref|YP_952396.1| tryptophanyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119955385|gb|ABM12390.1| tryptophanyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 341

 Score = 43.6 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 81/236 (34%), Gaps = 33/236 (13%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSFRDE 89
           +      + G   T+ SLH G+     +  W  LQ+ G+     +    +          
Sbjct: 7   NTPRPVVFSGAQPTSDSLHLGNALGA-VAQWVGLQE-GNDAYFCVVDLHA---------- 54

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
              +  SQ+ +   ++     + ++  G     A +          +   +L     F  
Sbjct: 55  ---ITVSQDPETLRKRTLATAAQYLALGVDPDRATVFVQSHVPAHAELAWVLGCFTGFGQ 111

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+  +S+ +   S +   F Y +L A D +     YD  L   G DQ  ++   
Sbjct: 112 ASRMTQFKD-KSQKQGADSTTVGLFTYPVLMAADVL----LYDTGLVPVGEDQRQHLELA 166

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSP 254
            DL +R+    P  F +   ++  A+           KM K+      L   +  P
Sbjct: 167 RDLAQRINARFPGTFVVPEAMIPKATAKIYDLQDPTAKMSKSADSDAGLISLLDDP 222


>gi|302544630|ref|ZP_07296972.1| tryptophan-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462248|gb|EFL25341.1| tryptophan-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 337

 Score = 43.6 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 72/235 (30%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ+T H     +    +I                 E+
Sbjct: 11  GIQPTAGSFHLGNYLGAIRQYVALQET-HDAFYTVVDLHAIT----------VPQDPAEL 59

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N           +  G       +          +   ++  +  F   +RM  F+  
Sbjct: 60  RANSRLAAAQL---LASGLDPDRCTLFIQSHVPEHAQLGWVMNCLTGFGEASRMTQFKD- 115

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +S  +     +   F Y ILQ  D + L +     +   G DQ  +I    DL +R    
Sbjct: 116 KSAKQGADRSTVGLFTYPILQVADIL-LYQANHVPV---GEDQRQHIELTRDLADRFNGR 171

Query: 220 KLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                T P   +   +G          KM K+ S    +   +  P    +  ++
Sbjct: 172 FGETFTVPDAYIVKETGKIYDLQDPTVKMSKSASTPKGIVNLLDEPKVSAKKIKS 226


>gi|134298996|ref|YP_001112492.1| tryptophanyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134051696|gb|ABO49667.1| tryptophanyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 330

 Score = 43.6 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 85/277 (30%), Gaps = 35/277 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH + L     LQ+  +    ++    ++                +E +
Sbjct: 10  GMRPTGR-LHLGHQSVLNNWVRLQEE-YDCFFMVADWHAL------------TTGWEESK 55

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESV 159
           E       + + ++  G       +      L   +   L         + R+    + +
Sbjct: 56  EIHSNTIEMVADWLATGLNPEKCAIFRQSAILEHAELHLLFSMTTPLSWLERVPTYKDQI 115

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +   +  + ++   F  Y +L A D + + K     +   G DQ  ++    +L  R   
Sbjct: 116 QKLGEMGKDINTYGFLGYPLLMAADIL-IYKATTVPV---GEDQIPHVELTRELARRFNH 171

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                   P         +L    G KM K+    I++        +  +  +N++    
Sbjct: 172 LFKPVFPEPQAIVNKEVAVLPGVDGAKMSKSYHNYIFIGA------DVEEIKKNVNLMVT 225

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
                R T     ++  + K       +  K I TE 
Sbjct: 226 DPARIRKTDPGNPDVCVVHKFHRIYNPDVLKGIETEC 262


>gi|314927283|gb|EFS91114.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium
           acnes HL044PA1]
          Length = 257

 Score = 43.2 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             +V+AG A S   A R ++   + +N  +++   +++   D
Sbjct: 17  QALVEAGLARSRTLATRLVREGRVTVNGIVVTKPAMKVSASD 58


>gi|254282767|ref|ZP_04957735.1| tryptophanyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678970|gb|EED35319.1| tryptophanyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 335

 Score = 43.2 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 84/300 (28%), Gaps = 43/300 (14%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   +++       +    ++I              ++  +E      
Sbjct: 17  HLGNYVGAIKPAIEASRRSDTDAYLFLADYHALI------KCEDPEQVARSSKEIAAAW- 69

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVR----SR 162
                 +  G     +            +   +L    +   +NR  +   +V+    S 
Sbjct: 70  ------LALGLDPAGSHFYRQSDIPEVAELCWILCCNTAKGLMNRAHAYKAAVQANDASN 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
              +  +    F+Y IL A D +     ++      G DQ  ++    D+ +R       
Sbjct: 124 DDPDFGIKMGLFSYPILMAADIL----IFNAERVPVGRDQIQHVEMARDIAQRFNHHYEP 179

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW----------RN 263
             T P         +L    G KM K+ +  I L +                      ++
Sbjct: 180 LFTLPEAVVDDNVAVLQGLDGRKMSKSYNNTIPLFEGEKKLQKSINKIKTNLLEPGEPKD 239

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
            DD+ V             E  R     G    EAKK++   I   +    E  +     
Sbjct: 240 PDDSIVFQIWSAFADNEQRESMRQDFADGIAWGEAKKLLFKRINEELAPARERYQYLMDH 299


>gi|150020759|ref|YP_001306113.1| RNA-binding S4 domain-containing protein [Thermosipho melanesiensis
           BI429]
 gi|149793280|gb|ABR30728.1| RNA-binding S4 domain protein [Thermosipho melanesiensis BI429]
          Length = 230

 Score = 43.2 bits (100), Expect = 0.069,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           M L   +  A    S  E +R +K   +KIN  II+N   ++K  D 
Sbjct: 1   MRLDKFLSNAK-VGSRKEVKRLIKFGIVKINGEIITNVDFKVKENDI 46


>gi|317485053|ref|ZP_07943935.1| tRNA synthetase class I [Bilophila wadsworthia 3_1_6]
 gi|316923588|gb|EFV44792.1| tRNA synthetase class I [Bilophila wadsworthia 3_1_6]
          Length = 364

 Score = 43.2 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 90/331 (27%), Gaps = 36/331 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNSGKYDKIFIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    LC + +  +     +    N  +  E   
Sbjct: 61  QNIIEV-ALDYLACGLDPVKSTMFIQSQIPELCELSFYYMNLVTVARLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  +     
Sbjct: 120 RNFEASIPVGF--FTYPISQASDITAFK----ATAVPVGEDQAPMLEQTKEIVRKFNAVY 173

Query: 221 LFALTSPLLTT------------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
              L  P +                  KM K+L   I+L ++               +  
Sbjct: 174 GDTLVEPEMLLPDNKACLRLPGIDGKAKMSKSLGNCIYLGEDADEVKKKVMSMFTDPNHL 233

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            V    ++   P+                       +     + R               
Sbjct: 234 RVEDPGQVEDNPVFIYLDAFSRPEHFERHFPDYQNIQEMKAHYTRGGLGDMKVKKFL--- 290

Query: 329 MSIHSQHMPTISISKDEVSRGMG-LLTLIVK 358
            ++    +  I   + E+ + +  +  ++ +
Sbjct: 291 NNVLQDELEPIRNRRRELEKDIPAIYDILKE 321


>gi|322705373|gb|EFY96959.1| tryptophanyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 402

 Score = 43.2 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 24/304 (7%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK-TGHKPIS 72
           RG +    +    LD   S   +  + G   ++ SLH GH        WLQ+  G K I 
Sbjct: 79  RGIVFAHRDLHLILDRYESGLPIYLFTGRGPSSDSLHLGHSIPFEFTQWLQETLGAKLIL 138

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENI-EKIKGIFSSFIKYGTGKTDALMLNNETW 131
           ++              + + +       +++ +      +  + +G   +   M +N  +
Sbjct: 139 MLTD------------DMKILHDKDLPIQDVRKYDIANATDILAFGFDLSKTFMFSNMDY 186

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY------DFV 185
           +    Y +++  I    +V  +                     +     +          
Sbjct: 187 IGGAFYQNIIS-IARHITVRSIKEALGFTDDHNVGMFYCCSTQSAGCFASSFPGILVADK 245

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS--PLLTTASGTKMGKTLSG 243
              ++  C +                 G+  +    F  +S  P L  A         + 
Sbjct: 246 ASLRSIPCLIPCSYDIDGYFAEVRKHAGKIGELAPSFLYSSLLPSLQGADQKMSASVKTS 305

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AI+L  +             I    +    + L      + +          ++   I  
Sbjct: 306 AIYLTDDDDVVREKIIAAFPIGQKSMDVALEWLRFFLEDDEELATIQTKHRAHQLLSIEL 365

Query: 304 TEIT 307
            EI 
Sbjct: 366 REIL 369


>gi|296138678|ref|YP_003645921.1| tryptophanyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296026812|gb|ADG77582.1| tryptophanyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 341

 Score = 43.2 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 73/242 (30%), Gaps = 31/242 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               A  G   T+ S H G+    +     LQ    +    +                  
Sbjct: 10  KRQRALSGIQPTSDSFHLGNYLGAVKQWVDLQDE-FETFYFIPNMHG------------- 55

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +    + +   E+     +  +  G     + +          +   +L  I  F   +R
Sbjct: 56  ITTPHDPKVLRERTVFAVAQLLALGVDPERSTIFVQSQIPEHAELSWVLSCITGFGEASR 115

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+  +S      S S   F Y IL A D + L +     +   G DQ  ++    +L
Sbjct: 116 MTQFKD-KSAKNGTDSSSVGLFTYPILMAADIL-LYRPQVVPV---GEDQRQHLELTRNL 170

Query: 213 GERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            +R      K F +  P + + +           KM K+      L   +  P    +  
Sbjct: 171 AQRFNTRFKKTFVVPEPYIVSGTAKIYDLQNPTAKMSKSAESDAGLISILDEPAVIAKRV 230

Query: 262 RN 263
           ++
Sbjct: 231 KS 232


>gi|109897338|ref|YP_660593.1| 30S ribosomal protein S4 [Pseudoalteromonas atlantica T6c]
 gi|332307746|ref|YP_004435597.1| ribosomal protein S4 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|122972198|sp|Q15X49|RS4_PSEA6 RecName: Full=30S ribosomal protein S4
 gi|109699619|gb|ABG39539.1| SSU ribosomal protein S4P [Pseudoalteromonas atlantica T6c]
 gi|332175075|gb|AEE24329.1| ribosomal protein S4 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 206

 Score = 43.2 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++ +EAR+ +   AI +N  +++     +
Sbjct: 78  EAARLKGNTGENLLQLLEQRLDNVVYRIGFASTRSEARQLVSHKAILVNGQVVNVPSFNV 137

Query: 392 KLQDFDSTGN 401
              D  S   
Sbjct: 138 SADDVVSVRE 147


>gi|71402319|ref|XP_804088.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70866865|gb|EAN82237.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 252

 Score = 43.2 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 9   LSILSERGFIHQI----SNPRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFW 62
           L     RG +       +    +    + G   AY+  G   +A S+H GH    +L  +
Sbjct: 97  LHHFFRRGIVFSHRDFGTALDCVRASLATGTHRAYLYTGRGPSARSMHIGHCIPFLLTRY 156

Query: 63  LQKTGHKPISL 73
           LQ     P+ +
Sbjct: 157 LQDALGLPLVI 167


>gi|322693885|gb|EFY85730.1| tryptophanyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 402

 Score = 43.2 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 83/304 (27%), Gaps = 24/304 (7%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK-TGHKPIS 72
           RG +    +    LD   S   +  + G   ++ SLH GH        WLQ+  G K I 
Sbjct: 79  RGIVFAHRDLHLILDRYESGLPIYLFTGRGPSSDSLHLGHSIPFEFTQWLQETLGAKLIL 138

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENI-EKIKGIFSSFIKYGTGKTDALMLNNETW 131
           ++              + + +       +++ +      +  + +G   +   M +N  +
Sbjct: 139 MLTD------------DMKILHDKDLPIQDVRKYDIANATDILAFGFDLSKTFMFSNMDY 186

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY------DFV 185
           +    Y +++  I    +V+ +                     +     +          
Sbjct: 187 IGGAFYQNIIS-IARHITVSSIKEALGFTDDHNVGMFYCCSTQSAGCFASSFPGILVADK 245

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS--PLLTTASGTKMGKTLSG 243
              ++  C +                 G+  +    F  +S  P L            + 
Sbjct: 246 ASLRSIPCLIPCSYDIDGYFAEVRKHAGKIGELAPSFLYSSLLPSLQGDDQKMSASVKTS 305

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AI+L  E             I    +    + L      + +          ++   I  
Sbjct: 306 AIYLTDEDDVVREKILAAFPIGQKSMDVALEWLRFFLEDDEELATIQTKHRAHQLLSIEL 365

Query: 304 TEIT 307
            EI 
Sbjct: 366 REIL 369


>gi|269956101|ref|YP_003325890.1| RNA-binding S4 domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269304782|gb|ACZ30332.1| RNA-binding S4 domain protein [Xylanimonas cellulosilytica DSM
           15894]
          Length = 77

 Score = 43.2 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 336 MPTISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           MP+++     +    + L   +  AG A S NEAR  +    + +N  + +
Sbjct: 1   MPSMTPEAVPIRDDMIRLGQFLKLAGLADSGNEARDLIADGEVSVNGEVET 51


>gi|194748078|ref|XP_001956476.1| GF24575 [Drosophila ananassae]
 gi|190623758|gb|EDV39282.1| GF24575 [Drosophila ananassae]
          Length = 702

 Score = 43.2 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 84/276 (30%), Gaps = 42/276 (15%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGT 78
           + S+        S+     + G   T  SLH G+    +     +Q         +    
Sbjct: 75  KSSHNEGFPEGKSRWPRKVFSGVQPTG-SLHLGNYLGAVRKWVEMQNAREDVTICIVDLH 133

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
                      +        ++ENI  +    ++ +  G     + +    +     ++ 
Sbjct: 134 ---------SITLP-HNPPVLRENIFTM---AATLLSCGIDPAKSTLFVQSSVPEHAEFN 180

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  + +   + ++  F   +SRL ++  L    + Y +LQA D   L K     +   
Sbjct: 181 WILSSLTTMPRLAQLPQFRE-KSRLVKDVPLGL--YVYPVLQAADI-MLYKATQVPV--- 233

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPL---LTTASG-----------TKMGKTLSGA 244
           G+DQ  +I     L     T   +  T P+   L                 KM K+ +  
Sbjct: 234 GADQLQHIQLAQHLARSYNTR--YGETFPVCQALIEDGNASRVLSLRDPSKKMSKSEANP 291

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
                    P    Q  +      V  F   +T  P
Sbjct: 292 KATINLCDPPDVIVQKIK----KAVTDFTSDITFNP 323


>gi|330819662|ref|YP_004348524.1| tryptophanyl-tRNA synthetase II [Burkholderia gladioli BSR3]
 gi|327371657|gb|AEA63012.1| tryptophanyl-tRNA synthetase II [Burkholderia gladioli BSR3]
          Length = 358

 Score = 43.2 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 27/230 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +    L +  H+   L+    ++         +       +++ N+
Sbjct: 19  PTGP-LHLGHYVGSLRTRLLLQDTHQQNILVADTQAM---------TDNAHDPDKVRRNV 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++  +    +     +T   + +    L  +  + L     S    N  +  E      
Sbjct: 69  LEV-ALDYLAVGIDPARTTICLQSALPALAELTLLYLNFVTVSRLERNPTIKDEIQARGF 127

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
            R+    F    Y + QA D       +   +   G DQ   I    ++  RL       
Sbjct: 128 GRDIPAGF--LCYPVAQAADIT----GFRATVVPVGEDQAPLIEQTNEIVRRLNRQTGIE 181

Query: 220 --KLFALTSPLLTT----ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                    P L          KM K+L  AI L     +     +    
Sbjct: 182 LLPEVEALIPTLGRLPGIDGKAKMSKSLGNAISLAASEDAIRAAVRQMYT 231


>gi|195022033|ref|XP_001985504.1| GH17095 [Drosophila grimshawi]
 gi|193898986|gb|EDV97852.1| GH17095 [Drosophila grimshawi]
          Length = 683

 Score = 43.2 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 83/318 (26%), Gaps = 34/318 (10%)

Query: 37  TAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
             + G   T  SLH G+    +     LQK        +    S I  P      R  + 
Sbjct: 77  KIFSGIQPTG-SLHLGNYLGAVRKWTHLQKARENVTLCIVDMHS-ITMPHNPPMLRENIF 134

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                     +    S+          A       W+           + S  ++ R+  
Sbjct: 135 MMAATLLACGVDPAQSTLFVQSGVMEHAE----LNWI-----------LSSLTTMPRLAQ 179

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
               + + +R + +    + Y +LQA D   L K     +   G+DQ  +I     L   
Sbjct: 180 LPQFKEKSRRVKDVPLGLYVYPVLQAADI-MLYKATHVPV---GADQLQHIQLAQHLIRA 235

Query: 216 LK--TPKLFALTSPLLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                 ++F   SP++                KM K+            SP    +  + 
Sbjct: 236 FNTRYGEMFPECSPMIEENDASRVLSLREPSKKMSKSDQDPRGTINLSDSPELIREKIKK 295

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
                        +  P             + + A  +   ++      +E    A    
Sbjct: 296 AVTDFTSDITYSPSMRPGVSNLVNIHSHVTDESIATVVEEAKLLDTAKYKERVADAVIEH 355

Query: 324 MECFDMSIHSQHMPTISI 341
           +      I+        +
Sbjct: 356 LRPIREKINMHLANEREL 373


>gi|71402285|ref|XP_804076.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70866843|gb|EAN82225.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 246

 Score = 43.2 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 25/180 (13%)

Query: 9   LSILSERGFIHQISN----PRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFW 62
           L     RG +    +       +    + G   AY+  G   +A S+H GH+   +L  +
Sbjct: 41  LQHFFRRGIVFSHRDFGAALDCVRASFATGTHRAYLYTGRGPSAQSMHIGHVMPFLLTRY 100

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK-IKGIFSSFIKYGTGKT 121
           LQ     P+ +       I D    DE           E     +       I +G    
Sbjct: 101 LQDALGLPLVI------QITD----DEKHFFRDIPVSGERASGLVVENIKDIIAFGFDPR 150

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  ++  +          +   V RML+  +V++    + S +  +  +  +QA
Sbjct: 151 KTFIFRNTMYMGDMYP--------TVVQVQRMLTLSAVKNAFGLKDSDNVGKAAFPAVQA 202


>gi|291523263|emb|CBK81556.1| tryptophanyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 360

 Score = 43.2 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNSGEYDKVFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 61  QNVIEV-ALDYMACGLDPAKSTLFIQSQIAELCELSFYYMNLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  +  +  
Sbjct: 120 RNFETSIPVGF--FTYPISQAADITAFK----ATTVPVGEDQSPMIEQTREIVHKFNSVY 173

Query: 221 LFALTSPLLTTASGTKM 237
              L  P +        
Sbjct: 174 GETLVEPKILLPDNEAC 190


>gi|160881602|ref|YP_001560570.1| tryptophanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160430268|gb|ABX43831.1| tryptophanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 331

 Score = 43.2 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 95/342 (27%), Gaps = 45/342 (13%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            S+       G D T   LH GH    +     LQ   +    L+    ++         
Sbjct: 1   MSEAKKRILTG-DRTTGKLHLGHYVGSLSQRVELQDE-YDTFILLADIQAL--------- 49

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSF 147
                  +    N   I  +    +  G       +        +  +     +    + 
Sbjct: 50  --TTHFERPELINA-SIYDVAMDNLSVGLDPNKVTIFQQSQIKAIAELTIFYSMFVSVNV 106

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              N  +  E   +     + L++    Y + Q+ D        +  L   G DQ  ++ 
Sbjct: 107 LRHNPTIKTE---AANYGYEDLTYGFLGYPVSQSADIT----FCNADLVPVGEDQLPHME 159

Query: 208 CGIDLGER---------LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
               +  R          +     +  S L+      KMGK+L  AI+L+ +  +     
Sbjct: 160 MTRKIVRRFNDLYGETLHEPKAKLSSCSRLVGLDGNAKMGKSLGNAIYLSDDAKTVSEKV 219

Query: 259 QYWRNIDDAD------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           +      +              V ++ K        ++    +         KK +A ++
Sbjct: 220 RNAVTDPNRITLKDPGNPEICVVQAYHKVFNPTEHEDVCNRCRTATIGCVACKKRLAEKL 279

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
             ++    +      A        I +       I ++ V++
Sbjct: 280 NELLDPFRDRRAYYEAHRSEVKEIIMAGSEKANKIGEETVAK 321


>gi|167574884|ref|ZP_02367758.1| tryptophanyl-tRNA synthetase II [Burkholderia oklahomensis C6786]
          Length = 346

 Score = 43.2 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 68/231 (29%), Gaps = 29/231 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    F    Y + QA D               G DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRRINRQAGV 181

Query: 219 -----PKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                      T+  L      TKM K+   AI L+    +  +  +    
Sbjct: 182 DVLPEANALIPTTGRLPGVDGKTKMSKSQGNAIPLSSSPDAITDAVKRMYT 232


>gi|254448529|ref|ZP_05061989.1| tyrosyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261912|gb|EDY86197.1| tyrosyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 77

 Score = 43.2 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 12/34 (35%)

Query: 15 RGFIHQISNPRELDILCSQGVVTAYIGYDLTASS 48
          RG    +     ++ L     +    G+D TA  
Sbjct: 16 RGADEVLLESELVEKLKLGRPLRVKAGFDPTAPD 49


>gi|116250744|ref|YP_766582.1| FtsJ cell division/haemolysin-like protein [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255392|emb|CAK06467.1| putative FtsJ cell division/haemolysin-like protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 248

 Score = 43.2 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V  G   S + AR  ++   ++I   +++         
Sbjct: 11  QLLVSLGLFASRSRARDAVQRGTVRIGGQVVTKAGALFSAD 51


>gi|332296071|ref|YP_004437994.1| tryptophanyl-tRNA synthetase [Thermodesulfobium narugense DSM
           14796]
 gi|332179174|gb|AEE14863.1| tryptophanyl-tRNA synthetase [Thermodesulfobium narugense DSM
           14796]
          Length = 329

 Score = 43.2 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 27/232 (11%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T  SLH GH   ++     LQ+  +K    +    ++              + Q+ 
Sbjct: 8   GMRPTG-SLHIGHYLGVLENWKILQEN-YKCFFGIVDWHAL------------TTKWQDS 53

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +    I+ + + ++  G     + ++        +    +L  +     + R  + +  
Sbjct: 54  ADLKAYIEEMLAEWLSCGIDPKKSTIILQSLVPEHVHLHMVLSMLTPVSWLERNPTVKEQ 113

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
              L  E+ L++    Y +L A D + + K+    +   G DQ  ++    ++  R    
Sbjct: 114 ARELGIEEQLTYGHLGYPVLMAADIL-IYKSKKVPV---GIDQVPHLEMTREIARRFNFH 169

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                  P+      P L    G KM K+ + AI+L  +  S          
Sbjct: 170 YKEIFPEPEALLAEFPKLLGVDGRKMSKSYNNAIYLKDDEKSVNEKVASMIT 221


>gi|260944778|ref|XP_002616687.1| hypothetical protein CLUG_03928 [Clavispora lusitaniae ATCC 42720]
 gi|238850336|gb|EEQ39800.1| hypothetical protein CLUG_03928 [Clavispora lusitaniae ATCC 42720]
          Length = 468

 Score = 43.2 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            + ++ FA+S  +AR  +K+  +K+N   I +    +K  D  S
Sbjct: 108 ALFRSMFASSVRQAREFIKNGHVKVNGVTIKHPAFPLKSGDIFS 151


>gi|169838964|ref|ZP_02872152.1| putative tyrosyl-tRNA synthetase 1 [candidate division TM7
           single-cell isolate TM7a]
          Length = 79

 Score = 43.2 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
            R + R +  S+ +  N+E +K  + +F        +  ++NN  W   I YID L  IG
Sbjct: 1   GRKQERDLRNSETVNNNVESLKSNYQNF-----QGKNFELVNNYDWFKDINYIDFLYRIG 55

Query: 146 SFFSVNRMLSFESVRSRLKREQS 168
              S+ +ML  + V+ R+    S
Sbjct: 56  KHVSMTQMLDRDFVQQRIGEGGS 78


>gi|327295753|ref|XP_003232571.1| 30S ribosomal subunit S4 [Trichophyton rubrum CBS 118892]
 gi|326464882|gb|EGD90335.1| 30S ribosomal subunit S4 [Trichophyton rubrum CBS 118892]
          Length = 500

 Score = 43.2 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 36/116 (31%), Gaps = 1/116 (0%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  +   +         A   +          + +P   
Sbjct: 54  HGEQVRESQWERMFSRRLRAVVPMDPFDLARNDGSKNAAGRGSGMDKGDREDGRQVPDTP 113

Query: 341 ISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                 +     L   I +A FA+ST +AR+ +    + +N   +      +   D
Sbjct: 114 YMLMTFAPLERRLDVAIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYLLNPGD 169


>gi|167567430|ref|ZP_02360346.1| tryptophanyl-tRNA synthetase II [Burkholderia oklahomensis EO147]
          Length = 346

 Score = 43.2 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 68/231 (29%), Gaps = 29/231 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRVALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    F    Y + QA D               G DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRRINRQAGV 181

Query: 219 -----PKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                      T+  L      TKM K+   AI L+    +  +  +    
Sbjct: 182 DVLPEANALIPTTGRLPGVDGKTKMSKSQGNAIPLSSSPDAIADAVKRMYT 232


>gi|294054852|ref|YP_003548510.1| pseudouridine synthase [Coraliomargarita akajimensis DSM 45221]
 gi|293614185|gb|ADE54340.1| pseudouridine synthase [Coraliomargarita akajimensis DSM 45221]
          Length = 243

 Score = 43.2 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFDSTGNI 402
               +  LI  AG   S  EA R ++   +++N  I    +K +I    F +   +
Sbjct: 5   EKQRIQKLIANAGLC-SRREAERLIEDGKVRVNGKIAQLGDKARISDDIFVNNKPL 59


>gi|83590753|ref|YP_430762.1| tryptophanyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83573667|gb|ABC20219.1| tryptophanyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 337

 Score = 43.2 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 77/290 (26%), Gaps = 39/290 (13%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFR 87
            + ++       G   T   LH GH    ++    LQ   +    ++    ++       
Sbjct: 3   EIQTKKKGRILTGDRPTGK-LHLGHYVGSLINRVRLQDE-YDTFLIIADVQAL------- 53

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIG 145
                    +E ++    ++ +   ++  G     + +        +  +     +    
Sbjct: 54  -----TTNFEEPEKLARDVREVALDYLAAGIDPEKSTIFVQSLVPEIAELTIFYSMIITV 108

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           +    N  +  E+ +        +++    Y + QA D           L   G DQ  +
Sbjct: 109 NTLRHNPTIKSEAAQRGYTD---MTYGFLGYPVSQAADIT----FCKANLVPVGEDQLPH 161

Query: 206 IICGIDLGERLK---------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
           I     L  R              L      L+      KM K+L  AI L+     P  
Sbjct: 162 IELTRKLVRRFNSLYGPVLVEPEALVGEVPRLVGLDGAAKMSKSLDNAINLS---DPPEE 218

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
             +  +N           R T     +I  +              I    
Sbjct: 219 VERRVKNAVTDPAR---IRATDPGHPDICTVFAYHTAFNKPVIPEIEESC 265


>gi|71403717|ref|XP_804630.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70867703|gb|EAN82779.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 371

 Score = 43.2 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 6  SDFLSILSERGFIHQI----SNPRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLML 59
          ++ ++    RG +       +    +    + G   AY+  G   +A S+H GH+   +L
Sbjct: 20 TNGIAPFFRRGIVFSHRDFGTALDCVRASFATGTHRAYLYTGRGPSAQSMHIGHVIPFLL 79

Query: 60 LFWLQKTGHKPISL 73
            +LQ     P+ +
Sbjct: 80 TRYLQDALGLPLVI 93


>gi|326693118|ref|ZP_08230123.1| tryptophanyl-tRNA synthetase II [Leuconostoc argentinum KCTC 3773]
          Length = 338

 Score = 42.8 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 56/180 (31%), Gaps = 19/180 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G ++P  ++    +      F D +R   + ++   
Sbjct: 12  PTGK-LHIGHYIGSLKNRVAMQNSGEYEPFVMIADTQA------FTDNARNPEKIRQSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +         ++  G   T   +          +  +    + S   + R  + ++  S
Sbjct: 65  EVALD------YLAVGIDPTKTTIFVQSQIKGLFELTEYFMNLVSVARLQRNPTVKAEIS 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           +    + +      Y + QA D   + +     +   G DQ   +    +L         
Sbjct: 119 QKGFGEGIPAGFLTYPVSQAADI-AIFRATKVPV---GDDQEPMLEQARELVRSFNNAYQ 174


>gi|227827919|ref|YP_002829699.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227459715|gb|ACP38401.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 386

 Score = 42.8 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 77/318 (24%), Gaps = 39/318 (12%)

Query: 5   KSDFLSILS---ERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLM 58
             + +  L     R       +    L+          Y G    A SL  H GHL   +
Sbjct: 44  MKNLVGELHVMLRRNVFFSHRDLELVLNDYEKGKGFFLYTGR---APSLGMHIGHLIPFI 100

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
              WLQ         +                  +   ++   N E       S+     
Sbjct: 101 FTKWLQDK-FNVNLYI-----------------EITDDEKFMRNPEYTLDQTRSWAYDNI 142

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
               A+  N +          +         + + L+F  VR+    + S +     Y  
Sbjct: 143 LDIIAVGFNADKTFIFQDTEYIRNMYPIAVKIAKKLTFSEVRATFGLDVSSNIGLIFYPA 202

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ    +   K       +     W       +     K  ++ +   P LT   G    
Sbjct: 203 LQIAPTMFEKKRCLIPAGIDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSS 262

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK------------RLTTLPMSEIDR 286
                AI+L  +  +       +        +   +            +       E D 
Sbjct: 263 SNPETAIYLVDDPKTVERKIMKYAFSGGQPTIELHRKYGGNPEIDVPFQWLYYFFEEDDN 322

Query: 287 MAKLQGKEINEAKKIIAT 304
             K   +E    K +   
Sbjct: 323 RIKEIEEEYRSGKMLTGE 340


>gi|319900074|ref|YP_004159802.1| tryptophanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415105|gb|ADV42216.1| tryptophanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 364

 Score = 42.8 bits (99), Expect = 0.091,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 69/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  M   ++++
Sbjct: 13  PTGR-LHIGHYVGSLRRRVELQNSGLYDKTFIFIADAQAL---------TDNMENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADITAFR----ATTVPVGEDQEPMLEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 176 GETLVEPEILLPENAACLRLPGTDGKAKMSKSLGNCIYLSDTADEVQKKVKSMYT 230


>gi|330814795|ref|XP_003291416.1| hypothetical protein DICPUDRAFT_156014 [Dictyostelium purpureum]
 gi|325078409|gb|EGC32062.1| hypothetical protein DICPUDRAFT_156014 [Dictyostelium purpureum]
          Length = 383

 Score = 42.8 bits (99), Expect = 0.091,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 30/249 (12%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM-LLFWLQKT--------- 66
            ++  ++  E+     +  VT + G   T+++LH G+    M     +Q           
Sbjct: 25  LVNLKTSIEEI-NFDEKRKVTVFSGMQPTSAALHLGNYLGAMDNWLKIQDLIAKHNEVSP 83

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK I  +    S+    +   +             +             G      ++ 
Sbjct: 84  GHKLIFSIVDLHSLTATKTLSPKELHSNTLSVAINYLAS-----------GIDPQKVILF 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           N        +   +   I SF  ++ M+ F+         QS+S    +Y +L A D + 
Sbjct: 133 NQSMVAAHSELTWIFNCIASFSKLSTMVQFK--EKSKSNSQSISNGLLSYPVLMAADIL- 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +     +   G DQ  +I    ++         K +     ++++ +  ++     G 
Sbjct: 190 LYRATHVPV---GDDQTQHIEFTREIVNSFHHTYKKKYFPLPTIISSETSKRIMSLQDGR 246

Query: 245 IWLNKEMTS 253
           + ++K   S
Sbjct: 247 VKMSKSDPS 255


>gi|302348317|ref|YP_003815955.1| Tryptophanyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328729|gb|ADL18924.1| Tryptophanyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 373

 Score = 42.8 bits (99), Expect = 0.091,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 82/261 (31%), Gaps = 42/261 (16%)

Query: 6   SDFLSILSE----------RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHL 54
           S+ L  L            RG I    +    L+   S   V    G+  +    H GH+
Sbjct: 31  SEILEKLKSMGVEPSAFMRRGIIFGHRDMDVVLNAWASGEPVAVVTGFMPSGQ-FHFGHM 89

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
              + L + Q+ G +    M    +           RR+ R + I+  +E+        +
Sbjct: 90  LTGLQLVFYQRLGFRVFVCMADAEAY--------AVRRVSREEAIKSALEEFIPNL-LAL 140

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                +T+              Y +L++   +  + N M +             LS  + 
Sbjct: 141 GLDPQRTEFYFQTGRE----GPYHELIQLFSAKVTFNEMEA---------IYGDLSPAKV 187

Query: 175 NYMILQAYDFVE----LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTS 226
              + QA D +         Y   +   G+DQ  +I    D+  R+K         A   
Sbjct: 188 MSALTQAADILHPMLKEYGGYKYVVVPVGADQDPHIRLSRDIATRMKGEIELTPPAATYH 247

Query: 227 PLLTTASGTKMGKTLSGAIWL 247
            L+    G KM K+   A   
Sbjct: 248 KLIRGLDGGKMSKSRPEATIF 268


>gi|296111064|ref|YP_003621445.1| tryptophanyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832595|gb|ADG40476.1| tryptophanyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 338

 Score = 42.8 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 54/180 (30%), Gaps = 19/180 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G + P  ++    +      F D +R   + ++   
Sbjct: 12  PTGK-LHIGHYIGSLKNRVRMQNSGEYSPFVMIADTQA------FTDNARNPEKIRQSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +         ++  G       +          +  +    + S   + R  + +S  S
Sbjct: 65  EVALD------YLAVGIDPAKTTIFVQSQIKGLFELTEYFMNLVSVARLQRNPTVKSEIS 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           +    + +      Y + QA D   + +     +   G DQ   +    +L         
Sbjct: 119 QKGFNEGIPAGFLTYPVSQAADI-AIFRATKVPV---GDDQEPMLEQARELVRSFNNAYQ 174


>gi|39995572|ref|NP_951523.1| S4 domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39982335|gb|AAR33796.1| S4 domain protein [Geobacter sulfurreducens PCA]
          Length = 71

 Score = 42.8 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           + L + +  A    S  EA+  +   A+++N  
Sbjct: 14  IKLDSFLKAANLVASGGEAKIIIAEGAVRVNGE 46


>gi|261878969|ref|ZP_06005396.1| tryptophan-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334425|gb|EFA45211.1| tryptophan-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 363

 Score = 42.8 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 82/324 (25%), Gaps = 46/324 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGDYDRMFVFMADVQAL---------TDNADDPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESV 159
           +N   +  +   ++  G       +          +    L  I S   V R       V
Sbjct: 61  QN---MMEVALDYLSAGLDPEKCTIYIQSRIPELAELTTYLMNIVSVSRVQRNPTVKTEV 117

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R     S+    F Y + QA D               G DQ   +    +L  R    
Sbjct: 118 KMRGFENNSIPLGFFCYPVSQAADIAAFK----ATTVPAGEDQEPMLELARELVNRFNQT 173

Query: 220 KLFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR----- 262
               L  P +             T    KM K+L   I+L+ +  + +   +        
Sbjct: 174 YAPVLVEPNIMLPENAKARRLPGTDGKEKMSKSLGNCIFLSDDADTVWKKVKGMYTDPTH 233

Query: 263 -------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
                  +++   V ++    +       D        +  +A                 
Sbjct: 234 LNVSDPGHVEGNAVFTYLDAFS-NDQDFADFWPDFANLDELKAAYTAGGIGDMKCKKLLN 292

Query: 316 AEKAATAAMECFDMSIHSQHMPTI 339
                             Q +P I
Sbjct: 293 NVINRMLNPIRARRHEFEQDIPEI 316


>gi|154500357|ref|ZP_02038395.1| hypothetical protein BACCAP_04024 [Bacteroides capillosus ATCC
           29799]
 gi|150270862|gb|EDM98145.1| hypothetical protein BACCAP_04024 [Bacteroides capillosus ATCC
           29799]
          Length = 359

 Score = 42.8 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 65/250 (26%), Gaps = 28/250 (11%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +   W  +         M    +I          R+       
Sbjct: 37  GIQPSGD-LHLGNYLGAIK-NWGARADEFDCYYFMADMHTI--------TVRQTPADLRR 86

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                +     + +I  G       +          +   +L     F  ++RM  F+  
Sbjct: 87  -----RTLEQLAQYIACGLDPEKNTLFVQSHVHQHAELAWVLSCYTMFGELSRMTQFKD- 140

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
               K   +++   F Y  L A D +     Y       G DQ  ++    ++ +R    
Sbjct: 141 -KSAKHADNINAGLFTYPCLMAADIL----LYQPDFVPVGEDQKQHVELTRNIAQRFNHV 195

Query: 219 -PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
              +  +  P +       M           K   S      +     +  +  F + +T
Sbjct: 196 YGDVLKMPEPYIPKMGARVMSLNQPDT----KMSKSIPEGCVFLMEKPEDIMRKFKRAIT 251

Query: 278 TLPMSEIDRM 287
                   R 
Sbjct: 252 DSDTEHCVRY 261


>gi|326389494|ref|ZP_08211061.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994499|gb|EGD52924.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW
           200]
          Length = 327

 Score = 42.8 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 69/259 (26%), Gaps = 33/259 (12%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             + G   T   +H G+      +      Q   ++         ++             
Sbjct: 3   RVFSGVQPTGD-IHIGNYLG--AMRQFVALQD-DYECFFCAVDLHAL------------- 45

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNR 152
              Q+ +   EK   + + ++  G       +         +     L  +    +    
Sbjct: 46  TVPQDPKVLKEKTIELAALYLAIGLDPKKVTIFIQS----HVPAHAELAWLLQCITYFGE 101

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +      + + K ++S+S   F Y  L A D +     Y+      G DQ  ++    D+
Sbjct: 102 LSRMTQFKDKSKGKESVSVGLFTYPDLMAADIL----LYNTHYVPVGEDQKQHLELTRDI 157

Query: 213 GERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
            +R      + F +  P++       M  T         +  S  N      +       
Sbjct: 158 AQRFNNRFGETFVVPEPMILKLGARIMSLT--DPTKKMSKSDSDPNNRINLLDEPSVIKK 215

Query: 271 SFAKRLTTLPMSEIDRMAK 289
              + +T            
Sbjct: 216 KIMRAVTDSETEIRIDWEN 234


>gi|284166876|ref|YP_003405155.1| tryptophanyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016531|gb|ADB62482.1| tryptophanyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 542

 Score = 42.8 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 65/213 (30%), Gaps = 24/213 (11%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R +     +        G+  T    H GH      + W Q+ G   
Sbjct: 80  LMRRGVIFGHRDYRPVAEALQNDEPAAVLSGFMPTGDP-HIGHKLVFDEIIWHQQQG--- 135

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
                    +I D           R    +E  E  +    S +  G    +  +     
Sbjct: 136 ----ADAYGLIAD-----LEANSARGMSWEEIDEHARDYLLSLLALGFDPEEGELYRQSE 186

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-LAK 189
              + +  DL  E+G+  + +        ++    +          ++ Q  D +    +
Sbjct: 187 ---NRELQDLAFELGADANFSE------FQAIYGFDGETDVSHMQSVVTQMADILYPQLE 237

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
                +   G DQ  ++    DL ER++  K+ 
Sbjct: 238 EPKPTVIPVGPDQDPHVRLARDLAERMRFFKVT 270


>gi|227832358|ref|YP_002834065.1| Tryptophanyl-tRNA synthetase [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183782|ref|ZP_06043203.1| tryptophanyl-tRNA synthetase [Corynebacterium aurimucosum ATCC
           700975]
 gi|227453374|gb|ACP32127.1| Tryptophanyl-tRNA synthetase [Corynebacterium aurimucosum ATCC
           700975]
          Length = 344

 Score = 42.8 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 20/188 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ + H+    +    +I                +E+
Sbjct: 17  GIQPTADSYHLGNYLGALKQWIDLQDS-HEAFYFIPDLHAIT----------VEQNPEEL 65

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +             I  G     + +          +   +L+ +  F   +RM  F+  
Sbjct: 66  RHRTVAGAAQL---IALGIDPAKSTLFVQSHVPAHAELTWVLQCLTGFGEASRMTQFKD- 121

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +S  + +   S   F Y +L A D + L   +   +   G DQ  ++    +L ER    
Sbjct: 122 KSLKQGQDRTSVGLFTYPVLMAADIL-LYSPHYVPV---GEDQRQHLELTRNLAERFNNK 177

Query: 220 KLFALTSP 227
                  P
Sbjct: 178 YGVVFRVP 185


>gi|28209926|ref|NP_780870.1| tRNA pseudouridine synthase A [Clostridium tetani E88]
 gi|28202361|gb|AAO34807.1| tRNA pseudouridine synthase A [Clostridium tetani E88]
          Length = 235

 Score = 42.8 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M L   I   G   S  EA   +K   +K+N   I+     +  +D        L   KK
Sbjct: 1   MRLNNFISSTGIC-SRREADELIKQKKVKVNGE-IAPLGYIVNSKDKIEVNGKLLQK-KK 57

Query: 410 N 410
           N
Sbjct: 58  N 58


>gi|160914096|ref|ZP_02076321.1| hypothetical protein EUBDOL_00107 [Eubacterium dolichum DSM 3991]
 gi|158434013|gb|EDP12302.1| hypothetical protein EUBDOL_00107 [Eubacterium dolichum DSM 3991]
          Length = 328

 Score = 42.8 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 63/240 (26%), Gaps = 31/240 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   L  G+    +  F   +  +     +    +             +    E  
Sbjct: 7   GIKPTGR-LTLGNYIGAIRNFVAYQEDYDMYVFIANLHA-------------ITVPIERA 52

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E  +  K + + ++  G     A +          +   +L        + RM  ++   
Sbjct: 53  ELKQNTKDLIALYLACGLDPKKATIFLQSDLHEHAELGWILTCNSYVGELQRMTQYKD-- 110

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              K E  ++   F Y  L A D +     YD      G DQ  ++    DL ER     
Sbjct: 111 KTAKGETGITAGLFTYPSLMAADIL----LYDADYVPVGVDQKQHVELTRDLAERFNHRY 166

Query: 221 LFALTSP-----------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
               T P                   KM K+          +  P    +   +     +
Sbjct: 167 GDTFTVPEPLVAKVGAKVYSLQDPRKKMSKSEDNPKGTIDLLDEPSVARKKIMSAVTDSI 226


>gi|291460666|ref|ZP_06600056.1| ribosomal large subunit pseudouridine synthase F [Oribacterium sp.
           oral taxon 078 str. F0262]
 gi|291416625|gb|EFE90344.1| ribosomal large subunit pseudouridine synthase F [Oribacterium sp.
           oral taxon 078 str. F0262]
          Length = 247

 Score = 42.8 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           + + G   S  EA R +    +++N       +   +    +  G +    GK
Sbjct: 7   LSELGLC-SRREADRWIAEGRVRLNGETAEMGQQVEEKDRLELDGKLVKKAGK 58


>gi|227830641|ref|YP_002832421.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579524|ref|YP_002837922.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229581788|ref|YP_002840187.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|229585186|ref|YP_002843688.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238620145|ref|YP_002914971.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284998168|ref|YP_003419935.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457089|gb|ACP35776.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010238|gb|ACP46000.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228012504|gb|ACP48265.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228020236|gb|ACP55643.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238381215|gb|ACR42303.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284446063|gb|ADB87565.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323475006|gb|ADX85612.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477736|gb|ADX82974.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 386

 Score = 42.8 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 81/318 (25%), Gaps = 39/318 (12%)

Query: 5   KSDFLSILS---ERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLM 58
             + +  L     R       +    L+          Y G    A SL  H GHL   +
Sbjct: 44  MKNLVGELHVMLRRNVFFSHRDLDLVLNDYEKGKGFFLYTGR---APSLGMHIGHLIPFI 100

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
              WLQ         +      I D    DE         + +            I  G 
Sbjct: 101 FTKWLQDK-FNVNLYI-----EITD----DEKFMRNPEYTLDQTRSWAYDNILDIIAVGF 150

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +  +  ++ ++  I +         + + L+F  VR+    + S +     Y  
Sbjct: 151 NPDKTFIFQDTEYIRNMYPIAV--------KIAKKLTFSEVRATFGLDVSSNIGLIFYPA 202

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ    +   K       +     W       +     K  ++ +   P LT   G    
Sbjct: 203 LQIAPTMFEKKRCLIPAGIDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSS 262

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK------------RLTTLPMSEIDR 286
                AI+L  +  +       +        +   +            +       E D 
Sbjct: 263 SNPETAIYLVDDPKTVERKIMKYAFSGGQPTIELHRKYGGNPEIDVPFQWLYYFFEEDDN 322

Query: 287 MAKLQGKEINEAKKIIAT 304
             K   +E    K +   
Sbjct: 323 RIKEIEEEYRSGKMLTGE 340


>gi|260424785|ref|ZP_05733291.2| ribosomal small subunit pseudouridine synthase A [Dialister invisus
           DSM 15470]
 gi|260403192|gb|EEW96739.1| ribosomal small subunit pseudouridine synthase A [Dialister invisus
           DSM 15470]
          Length = 277

 Score = 42.8 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +    M L   +       +  E +R ++  A+++N   I++    +   D
Sbjct: 12  ADEEDVMRLDKFLSDMNM-GTRTELKRDIRKGAVQVNGEKITDPGFMVNEND 62


>gi|124027820|ref|YP_001013140.1| tryptophanyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|166225534|sp|A2BLD4|SYW_HYPBU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|123978514|gb|ABM80795.1| Tryptophanyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 373

 Score = 42.8 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +  + L+   S   +    G+  +    H GH      + + QK G + 
Sbjct: 46  LMRRGIIFGHRDYEKILEAYRSGERIALVTGFMPSGK-FHFGHKMVADQIIYYQKLGFEI 104

Query: 71  ISLMGGGTSI 80
             ++    + 
Sbjct: 105 FVVIADAEAY 114


>gi|302387646|ref|YP_003823468.1| pseudouridine synthase [Clostridium saccharolyticum WM1]
 gi|302198274|gb|ADL05845.1| pseudouridine synthase [Clostridium saccharolyticum WM1]
          Length = 262

 Score = 42.8 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+ L   + +AG   S  EA R +++  + IN    +  +  +  Q     G      G
Sbjct: 4   EGIRLNKFLSEAGIC-SRREADRFIEAGKVSINGKAAATGQKVLPGQSVTINGRTV-QAG 61

Query: 408 K 408
           K
Sbjct: 62  K 62


>gi|227831921|ref|YP_002833628.1| hypothetical protein cauri_0091 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183175|ref|ZP_06042596.1| hypothetical protein CaurA7_04220 [Corynebacterium aurimucosum ATCC
           700975]
 gi|227452937|gb|ACP31690.1| hypothetical protein cauri_0091 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 102

 Score = 42.8 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 18/57 (31%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +        + L   +  A    +  EA+  ++   + +N  +       + L D  
Sbjct: 12  LEVSIRGESIKLGQFLKLASLVATGGEAKELIEQGQVTVNGEVTKQRGATLALGDVI 68


>gi|311896456|dbj|BAJ28864.1| putative tryptophanyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 345

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 80/256 (31%), Gaps = 33/256 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +G      G   T+ S H G+    +     LQ+  +    ++    +I           
Sbjct: 11  KGRPRVLSGIQPTSGSFHLGNYLGAVRQWVDLQEA-NDAFYMVVDLHAIT---------- 59

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                  +++N           +  G       +          +   ++  +  F    
Sbjct: 60  VEQDPAVLRQNTRISAAQL---LGAGLDPERCTLFVQSQVPEHAQLAWVMNCLTGFGEAA 116

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +     +   F Y +L   D + L +     +   G DQ  ++    D
Sbjct: 117 RMTQFKD-KSAKQGSDRTTVGLFTYPVLMVADVL-LYQADAVPV---GEDQRQHLELTRD 171

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L +R      + F +  P +  A+           KM K+ +    L   +       + 
Sbjct: 172 LADRFNTRYGQTFTVPEPYILKATAKIQDLQDPAAKMSKSAATDKGLVNLLDPAKTSAKK 231

Query: 261 WRN--IDDADVVSFAK 274
           +++   D   VVS+ +
Sbjct: 232 FKSAVTDTDTVVSYDE 247


>gi|13476819|ref|NP_108388.1| hypothetical protein mlr8253 [Mesorhizobium loti MAFF303099]
 gi|14027580|dbj|BAB53849.1| mlr8253 [Mesorhizobium loti MAFF303099]
          Length = 546

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++     G  +   + +AG A S  +A   + +  +K+N   +++    +   D   
Sbjct: 90  AEATEEAGERIAKRLARAGLA-SRRDAEELIAAGRVKVNGRALTSPAFNVMPGDIIH 145


>gi|282891379|ref|ZP_06299880.1| hypothetical protein pah_c052o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498731|gb|EFB41049.1| hypothetical protein pah_c052o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 370

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 98/348 (28%), Gaps = 45/348 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +Q       G   T   LH GH    +      +       ++     +           
Sbjct: 18  NQPKKRILTGDRPTGL-LHLGHYVGSLKNRVKLQEKFDCYFIIADLHVL----------- 65

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                 E +  ++  + I    I Y     D                 +        S+N
Sbjct: 66  --TTKPEKESILKLRENISQMVIDYLACGIDPQKSVIYLQSAVPAVYQMNLIFQMLISLN 123

Query: 152 RMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           R+       E  R+     +S+ +    Y +LQ+ D +         L   G D   +I 
Sbjct: 124 RLTGLPSLKEMARNAHMSSESIPYGLVGYPVLQSADILMPR----AHLVPVGKDNEAHIE 179

Query: 208 CGIDLGERLKT---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
              D+  R              L +    L+ T    KM K+++ AI+L  +  +     
Sbjct: 180 LTRDIARRFNMYYGEFFPLPECLLSDVPTLIGTDGQGKMSKSVNNAIFLADDAKTVEKKV 239

Query: 259 QYWR------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIAT 304
           +                ++   V ++     T      D  ++ +  ++   E K+ +  
Sbjct: 240 KGMYTDPNRIRADMPGKVEGNPVFAYHDVFNTDKAEVEDLKSRYREGKVGDVEVKEKLTR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
            +   +    E  K         D  I+      I IS + V   + L
Sbjct: 300 ALNHFLDPIREKRKYYEQEKGLVDQVIYEGTQKMIEISNETVKEMLSL 347


>gi|291287275|ref|YP_003504091.1| tryptophanyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884435|gb|ADD68135.1| tryptophanyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 326

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 89/319 (27%), Gaps = 36/319 (11%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH    +     LQ   +     +    ++               + E 
Sbjct: 7   GMRPTGR-LHIGHYFGALKNWVDLQDK-YDCNYFVADWHAL-------------TTNYEA 51

Query: 100 QENIEKIKGIFSSFI-KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            ENI + +          G       M      +   +   LL  I     + R  +++ 
Sbjct: 52  PENIIENRKQLVLDWLSVGLDPEKCTMFVQSHNIYHAELSMLLSMITPVPWLERCPTYKE 111

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           ++     +   +    +Y ++   D +     Y  +    G DQ  +I    ++  R   
Sbjct: 112 IKQEQANKDLSNLGFLSYPVIMTSDII----MYGAKYVPVGEDQLPHIEISREIVRRFHH 167

Query: 219 --------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                        LT  P L    G KM K+   AI L++++       +      +   
Sbjct: 168 LYNCEVFEEPKGLLTEVPRLPGLDGRKMSKSYGNAIMLSEDLKEVEKKIKRMLTDTN--- 224

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
               KRLT     E+  +         E ++   TE  T         K          +
Sbjct: 225 ---RKRLTDPGNPEVCPVFDYHKVFSTEDERAEITEGCTKATMGCMDCKKILMKHMFALL 281

Query: 330 SIHSQHMPTISISKDEVSR 348
               +         D++  
Sbjct: 282 EPIQERRNKFEAEIDDIDE 300


>gi|220903318|ref|YP_002478630.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867617|gb|ACL47952.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 329

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 76/242 (31%), Gaps = 30/242 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDES 90
              +    G   T   LH GH   +  L    +  H  +    +    ++         +
Sbjct: 2   SKELRTVSGMRPTGP-LHLGHYFGV--LKNWVELQHTEEAYFFVADWHAL---------T 49

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                  ++ +NI   + +   ++  G    D ++          +   LL  I     +
Sbjct: 50  SDYADPSKVGQNI---REMVKDWVGAGLNPEDCVIFRQSAVKEHAELSLLLSMITPVSWL 106

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R  +++  + ++  +   +     Y +L A D + + + +   +   G DQ  ++    
Sbjct: 107 ERNPTYKEQQQQISNKDLGNAGFLCYPVLMAADIL-MYRPHGVPV---GEDQLPHMELTR 162

Query: 211 DLGERLKT---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
           ++  R            PK     +       G KM K+ +  I+L+  M       +  
Sbjct: 163 EIARRFNYLYGGDLLPEPKAMLTPAAKCPGLDGRKMSKSYNNGIFLSDNMADIQEKVRGM 222

Query: 262 RN 263
             
Sbjct: 223 FT 224


>gi|195591193|ref|XP_002085327.1| GD14730 [Drosophila simulans]
 gi|194197336|gb|EDX10912.1| GD14730 [Drosophila simulans]
          Length = 664

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 99/310 (31%), Gaps = 44/310 (14%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   S+     + G   T  SLH G+    +     LQ         +    SI      
Sbjct: 72  EEHNSRWPRKIFSGIQPTG-SLHLGNYLGAVRKWVELQNARDDVTVCIVDLHSIT----- 125

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                       ++ENI  +    ++ +  G   T + +          ++  +L  + +
Sbjct: 126 -----MPHNPPLLRENIFTM---AATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D   L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAADI-MLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLTT--------------ASGTKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T                   KM K+ +          
Sbjct: 231 QLAQHLSRIYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCD 288

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           SP    Q  +      V  F   +T  P   + +  +  +  +   ++ K +  E  T+ 
Sbjct: 289 SPDLITQKIK----KAVTDFTSDITYNPGKRAGVSNLVNIHAQVTGQSIKTVVNEAATLD 344

Query: 311 HGREEAEKAA 320
             + +   A 
Sbjct: 345 TAKYKDRVAE 354


>gi|126732069|ref|ZP_01747871.1| RNA pseudouridylate synthase family protein [Sagittula stellata
           E-37]
 gi|126707358|gb|EBA06422.1| RNA pseudouridylate synthase family protein [Sagittula stellata
           E-37]
          Length = 341

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++   G  +  +I +AG   S  EA R +    + +N ++I +  L +  +D  
Sbjct: 3   NKTPPGDRIAKVIARAG-RASRREAERMIAEGRVAVNGTVIDSPALNVTDKDRI 55


>gi|114776453|ref|ZP_01451498.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Mariprofundus ferrooxydans
           PV-1]
 gi|114553283|gb|EAU55681.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Mariprofundus ferrooxydans
           PV-1]
          Length = 289

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +   G   S  EA R +++  + IN  +I    + +K  D
Sbjct: 49  LAHCGLC-SRREADRWIQAGRVSINGQLIEAPGVIVKSGD 87


>gi|66803753|gb|AAY56636.1| unknown [Drosophila simulans]
          Length = 665

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 99/310 (31%), Gaps = 44/310 (14%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   S+     + G   T  SLH G+    +     LQ         +    SI      
Sbjct: 72  EEHNSRWPRKIFSGIQPTG-SLHLGNYLGAVRKWVELQNARDDVTVCIVDLHSIT----- 125

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                       ++ENI  +    ++ +  G   T + +          ++  +L  + +
Sbjct: 126 -----MPHNPPLLRENIFTM---AATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D   L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAADI-MLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLTT--------------ASGTKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T                   KM K+ +          
Sbjct: 231 QLAQHLSRIYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCD 288

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           SP    Q  +      V  F   +T  P   + +  +  +  +   ++ K +  E  T+ 
Sbjct: 289 SPDLITQKIK----KAVTDFTSDITYNPGKRAGVSNLVNIHAQVTGQSIKTVVNEAATLD 344

Query: 311 HGREEAEKAA 320
             + +   A 
Sbjct: 345 TAKYKDRVAE 354


>gi|110667025|ref|YP_656836.1| tryptophanyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109624772|emb|CAJ51178.1| tryptophan--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 614

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 77/260 (29%), Gaps = 29/260 (11%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I        +     +   V    G+  T    H GH      + W Q+ G   
Sbjct: 117 LMRRGVIFGHRGYDPVAEALQNNDPVAVLSGFMPTGDP-HIGHKLVFDEIIWHQQRGADA 175

Query: 71  ISLMGG--GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            +L+      +  G           +   EI ++    +    S +  G       +   
Sbjct: 176 YALIADLEAHAARG-----------LSWSEIDDHA---RDYLLSLLALGFDPESGELYRQ 221

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-L 187
                + +  D   E+GS  + +              +   +      +I Q  D +   
Sbjct: 222 SE---NRELQDFAFELGSKANFSE------FEGIYGFDSETNVAYMQSVITQMADILYPQ 272

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF-ALTSPLLTTASGTKMGKTLSGAIW 246
            +     +   G DQ  ++    DL  R++  K+  A  S  LT +    +         
Sbjct: 273 LEEPKPTVIPVGPDQDPHVRFARDLAARMRFFKVTKAYASFELTESERELVAAVYDERET 332

Query: 247 LNKEMTSPYNFWQYWRNIDD 266
             ++++ P         +D+
Sbjct: 333 YAEDVSRPRCAEAATWLVDN 352


>gi|315650379|ref|ZP_07903450.1| tryptophan--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315487306|gb|EFU77617.1| tryptophan--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 361

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 54/179 (30%), Gaps = 24/179 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +  M   ++++
Sbjct: 11  PTGK-LHVGHYIGSLKRRVELQNSGEFKKIFIMVADAQAL---------TDNMENPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ENI     +   ++  G     + M        L  + +  +     S    N  +  E 
Sbjct: 61  ENI---IEVVLDYLACGLDPEKSTMFIQSMVPELTELSFYYMNLVTVSRLQRNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                +    + F  F Y I QA D               G DQ   I    ++  +  
Sbjct: 118 GLRNFENSIPVGF--FTYPISQASDITAFK----ATTVPVGEDQLPMIEQTREIVRKFN 170


>gi|15610472|ref|NP_217853.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15842933|ref|NP_337970.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31794521|ref|NP_857014.1| tryptophanyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121639265|ref|YP_979489.1| tryptophanyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148663200|ref|YP_001284723.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824542|ref|YP_001289296.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167967106|ref|ZP_02549383.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215405356|ref|ZP_03417537.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215413217|ref|ZP_03421918.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428828|ref|ZP_03426747.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215432305|ref|ZP_03430224.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215447651|ref|ZP_03434403.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218755123|ref|ZP_03533919.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219559403|ref|ZP_03538479.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224991762|ref|YP_002646451.1| tryptophanyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800382|ref|YP_003033383.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           1435]
 gi|254233948|ref|ZP_04927273.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis C]
 gi|254365960|ref|ZP_04982005.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552444|ref|ZP_05142891.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188389|ref|ZP_05765863.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260202595|ref|ZP_05770086.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260206698|ref|ZP_05774189.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289445013|ref|ZP_06434757.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289449029|ref|ZP_06438773.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555616|ref|ZP_06444826.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           605]
 gi|289571568|ref|ZP_06451795.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T17]
 gi|289576064|ref|ZP_06456291.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis K85]
 gi|289747157|ref|ZP_06506535.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289752037|ref|ZP_06511415.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T92]
 gi|289755462|ref|ZP_06514840.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           EAS054]
 gi|289759486|ref|ZP_06518864.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T85]
 gi|289763528|ref|ZP_06522906.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis GM 1503]
 gi|294995895|ref|ZP_06801586.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635994|ref|ZP_06953774.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732991|ref|ZP_06962109.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526814|ref|ZP_07014223.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777668|ref|ZP_07416005.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu001]
 gi|306782394|ref|ZP_07420731.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu002]
 gi|306786216|ref|ZP_07424538.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu003]
 gi|306790584|ref|ZP_07428906.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu004]
 gi|306795108|ref|ZP_07433410.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu005]
 gi|306799303|ref|ZP_07437605.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu006]
 gi|306805150|ref|ZP_07441818.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu008]
 gi|306809338|ref|ZP_07446006.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu007]
 gi|306969442|ref|ZP_07482103.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu009]
 gi|306973788|ref|ZP_07486449.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu010]
 gi|307081498|ref|ZP_07490668.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu011]
 gi|307086105|ref|ZP_07495218.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu012]
 gi|313660323|ref|ZP_07817203.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039696|sp|P67591|SYW_MYCBO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|54042053|sp|P67590|SYW_MYCTU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|2894246|emb|CAA17108.1| PROBABLE TRYPTOPHANYL-TRNA SYNTHETASE TRPS (TRYPTOPHAN--TRNA
           LIGASE) (TRPRS) (TRYPTOPHAN TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|13883268|gb|AAK47784.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31620117|emb|CAD95489.1| PROBABLE TRYPTOPHANYL-TRNA SYNTHETASE TRPS (TRYPTOPHAN--TRNA
           LIGASE) (TRPRS) (TRYPTOPHAN TRANSLASE) [Mycobacterium
           bovis AF2122/97]
 gi|121494913|emb|CAL73396.1| Probable tryptophanyl-tRNA synthetase trpS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599477|gb|EAY58581.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis C]
 gi|134151473|gb|EBA43518.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507352|gb|ABQ75161.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148723069|gb|ABR07694.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis F11]
 gi|224774877|dbj|BAH27683.1| tryptophanyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321885|gb|ACT26488.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           1435]
 gi|289417932|gb|EFD15172.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289421987|gb|EFD19188.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440248|gb|EFD22741.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           605]
 gi|289540495|gb|EFD45073.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis K85]
 gi|289545322|gb|EFD48970.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T17]
 gi|289687685|gb|EFD55173.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289692624|gb|EFD60053.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T92]
 gi|289696049|gb|EFD63478.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           EAS054]
 gi|289711034|gb|EFD75050.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis GM 1503]
 gi|289715050|gb|EFD79062.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T85]
 gi|298496608|gb|EFI31902.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214004|gb|EFO73403.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu001]
 gi|308324943|gb|EFP13794.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu002]
 gi|308329175|gb|EFP18026.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu003]
 gi|308333008|gb|EFP21859.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu004]
 gi|308336630|gb|EFP25481.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu005]
 gi|308340495|gb|EFP29346.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu006]
 gi|308344366|gb|EFP33217.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu007]
 gi|308348304|gb|EFP37155.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu008]
 gi|308353028|gb|EFP41879.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu009]
 gi|308356865|gb|EFP45716.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu010]
 gi|308360821|gb|EFP49672.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu011]
 gi|308364427|gb|EFP53278.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu012]
 gi|323718009|gb|EGB27192.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905178|gb|EGE52111.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           W-148]
 gi|328460115|gb|AEB05538.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           4207]
          Length = 336

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 65/199 (32%), Gaps = 23/199 (11%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           G    + G   T+ SLH G+     +  W  LQ   H     +    + I  P   +  R
Sbjct: 6   GSRRIFSGVQPTSDSLHLGNALGA-VAQWVGLQD-DHDAFFCVVDLHA-ITIPQDPEALR 62

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R            +     + ++  G     A +          +   +L     F   +
Sbjct: 63  R------------RTLITAAQYLALGIDPGRATIFVQSQVPAHTQLAWVLGCFTGFGQAS 110

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +  ++ +   F Y +LQA D +     YD  L   G DQ  ++    D
Sbjct: 111 RMTQFKD-KSARQGSEATTVGLFTYPVLQAADVLA----YDTELVPVGEDQRQHLELARD 165

Query: 212 L-GERLKTPKLFALTSPLL 229
           +            +   +L
Sbjct: 166 VAQRFNSRFPGTLVVPDVL 184


>gi|317475710|ref|ZP_07934970.1| S4 domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316908166|gb|EFV29860.1| S4 domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 331

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 27/87 (31%), Gaps = 1/87 (1%)

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             +    +      A    +     +          + +  + L   +  AG   S  EA
Sbjct: 55  YGNRDSYSRPIRRTADYDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANAGVC-SRREA 113

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQD 395
              + +  + +N  +++    +IK  D
Sbjct: 114 DEFITAGVVSVNGEVVTELGTKIKRGD 140


>gi|46201216|ref|ZP_00208014.1| COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 294

 Score = 42.8 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +G  +   + +AG   S  EA R ++   + +N   + +    +   D  
Sbjct: 4   EKGERIAKRLARAGLC-SRREAERWIEMGRVSVNGKTLDSPACVVGPGDII 53


>gi|332295067|ref|YP_004436990.1| pseudouridine synthase Rsu [Thermodesulfobium narugense DSM 14796]
 gi|332178170|gb|AEE13859.1| pseudouridine synthase Rsu [Thermodesulfobium narugense DSM 14796]
          Length = 248

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKLSF 406
           M +   +  +G   S  +A   + S  +++N+ +IS+   ++         +   +K+  
Sbjct: 1   MRINKFLSFSGLT-SRRKAEDLILSGKVEVNDKVISDLSYKVDPNKDVVKVNGRLVKIR- 58

Query: 407 GKKNHIIC 414
            KK H + 
Sbjct: 59  -KKRHYLL 65


>gi|306835373|ref|ZP_07468394.1| tryptophan--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568739|gb|EFM44283.1| tryptophan--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 343

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 74/235 (31%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ+ G+     +    +             +   Q  
Sbjct: 16  GIQPTADSYHLGNYLGALKQWIDLQE-GYDAFYFIPDLHA-------------ITVEQNP 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +E   +     +  I  G     + +          +   + + +  F   +RM  F+  
Sbjct: 62  EELRNRTMAGAAQLIALGIEPEKSTLFVQSHVPAHAELTWVFQCLTGFGEASRMTQFKD- 120

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +S  +     S   F Y IL A D + L       +   G DQ  ++    +L ER    
Sbjct: 121 KSAKRGADRTSVGLFTYPILMAADIL-LYSPDYVPV---GEDQRQHLELTRNLAERFNNK 176

Query: 220 --KLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +  P +   +           KM K+      L   + +P    +  ++
Sbjct: 177 YGETFHVPEPFIPEGAAKIYDLQDPTSKMSKSGPNPKGLVNLLDAPKTSAKRIKS 231


>gi|312140775|ref|YP_004008111.1| tryptophan-tRNA synthetase trps [Rhodococcus equi 103S]
 gi|325675585|ref|ZP_08155269.1| tryptophan--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311890114|emb|CBH49432.1| tryptophan-tRNA synthetase TrpS [Rhodococcus equi 103S]
 gi|325553556|gb|EGD23234.1| tryptophan--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 347

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 67/243 (27%), Gaps = 35/243 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                 G   TA S H G+      L     LQ         +    + I  P    E R
Sbjct: 15  KPRVLSGIQPTADSFHLGNFLG--ALQQWVPLQD-DFDAFYFIPDLHA-ITVPQDPKELR 70

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +       Q     I    S+          A +            ++ +   G    + 
Sbjct: 71  QRTLRAVAQLLALGIDPERSTLFVQSQVPEHAELAW---------VLNCITGFGEASRMT 121

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +       +S  +     S   F Y +L A D + L +     +   G DQ  ++    D
Sbjct: 122 QFKD----KSARQGSDHASVGLFTYPVLMAADIL-LYRPQRVPV---GEDQRQHLELARD 173

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L  R      K F +  P +   +           KM K+      L   +  P    + 
Sbjct: 174 LAGRFNTRFGKTFVIPEPQIIKGTAKIYDLQDPTSKMSKSGPTPAGLVNLLDDPKVSAKK 233

Query: 261 WRN 263
            ++
Sbjct: 234 IKS 236


>gi|241203351|ref|YP_002974447.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857241|gb|ACS54908.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 248

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            L+V  G   S + AR  ++   +KI   +++
Sbjct: 11  QLLVSLGLFASRSRARDAVQRGTVKIGGQVVT 42


>gi|16124485|ref|NP_419049.1| S4 domain-containing protein [Caulobacter crescentus CB15]
 gi|221233169|ref|YP_002515605.1| ribosomal large subunit pseudouridine synthase B [Caulobacter
           crescentus NA1000]
 gi|13421359|gb|AAK22217.1| S4 domain protein [Caulobacter crescentus CB15]
 gi|220962341|gb|ACL93697.1| ribosomal large subunit pseudouridine synthase B [Caulobacter
           crescentus NA1000]
          Length = 421

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   + +AG   S  E  R +++  + IN  +++   +++   DF 
Sbjct: 33  PGERVAKALARAG-VASRREVERLIEAGRVAINGKVLTTPAVKVAPGDFL 81


>gi|83313225|ref|YP_423489.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Magnetospirillum magneticum
           AMB-1]
 gi|82948066|dbj|BAE52930.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 348

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           S G  +   + +AG   S  EA R ++   + +N   +S+    +   D 
Sbjct: 49  SEGERIAKRLARAGLC-SRREAERWIEDGRVTVNGHRLSSPACVVGPGDI 97


>gi|163815909|ref|ZP_02207279.1| hypothetical protein COPEUT_02089 [Coprococcus eutactus ATCC 27759]
 gi|158448719|gb|EDP25714.1| hypothetical protein COPEUT_02089 [Coprococcus eutactus ATCC 27759]
          Length = 353

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKRRVDLQNSGRYDEIYIMVADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     +    N  +  E   
Sbjct: 61  QNIMQV-ALDYLACGIDPEKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKAEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D     K  +  +   G DQ   I    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAF-KATEVPV---GEDQMPMIEQCKEIVHKFNSVY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              L  P +             T    KM K+L   I+L+++   P +  +   ++
Sbjct: 174 GETLVDPKIVLPDNEACLRLPGTDGKAKMSKSLGNCIYLSED---PADIKKKVMSM 226


>gi|187734754|ref|YP_001876866.1| pseudouridine synthase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424806|gb|ACD04085.1| pseudouridine synthase [Akkermansia muciniphila ATCC BAA-835]
          Length = 467

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            E + G+ +   +   G   S   A R +    +++N  +I    +++  +DF  
Sbjct: 8   SEENGGIRINKFLASCGI-DSRRVADRLIGEGRVEVNGKVIDTPGMRVTEKDFVK 61


>gi|318079465|ref|ZP_07986797.1| tryptophanyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 315

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 74/235 (31%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +A S H G+    +     LQ++ H     +    + I  P   D  R   R    
Sbjct: 4   GIQPSAGSFHLGNYLGAVRQWVALQES-HDAFYTVVDMHA-ITVPQDPDTLRANTRLSAA 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q     I    S+       +  A +            ++ L   G    + +       
Sbjct: 62  QLLAAGIDPERSALFVQSHVREHAELAW---------IMNCLTGFGEASRMTQFKD---- 108

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           ++  +  +  +   F Y +LQ  D + L + +   +   G DQ  ++    DL ER    
Sbjct: 109 KAAKQGAEGTTVGLFTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELTRDLAERFNAR 164

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +    +   +           KM K+ +    L   M  P    +  ++
Sbjct: 165 YGETFVVPEAYILKETAKIYDLQEPSAKMSKSAASPKGLVNLMDEPKATARKIKS 219


>gi|318058751|ref|ZP_07977474.1| tryptophanyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 330

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 74/235 (31%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +A S H G+    +     LQ++ H     +    + I  P   D  R   R    
Sbjct: 4   GIQPSAGSFHLGNYLGAVRQWVALQES-HDAFYTVVDMHA-ITVPQDPDTLRANTRLSAA 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q     I    S+       +  A +            ++ L   G    + +       
Sbjct: 62  QLLAAGIDPERSALFVQSHVREHAELAW---------IMNCLTGFGEASRMTQFKD---- 108

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           ++  +  +  +   F Y +LQ  D + L + +   +   G DQ  ++    DL ER    
Sbjct: 109 KAAKQGAEGTTVGLFTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELTRDLAERFNAR 164

Query: 218 TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +    +   +           KM K+ +    L   M  P    +  ++
Sbjct: 165 YGETFVVPEAYILKETAKIYDLQEPSAKMSKSAASPKGLVNLMDEPKATARKIKS 219


>gi|255011767|ref|ZP_05283893.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis 3_1_12]
 gi|313149605|ref|ZP_07811798.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis 3_1_12]
 gi|313138372|gb|EFR55732.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis 3_1_12]
          Length = 466

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 35/110 (31%), Gaps = 1/110 (0%)

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
                  +  +           +     +          + +  + L   +  AG   S 
Sbjct: 187 FNNDNRSQGFSRPVRRTGDYDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANAGVC-SR 245

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            EA   + +  + +N  +++    +IK  D     +  +S  +K +++ +
Sbjct: 246 READEFITAGVVSVNGEVVTELGTKIKRADVVKFHDETVSIERKVYVLLN 295


>gi|212538099|ref|XP_002149205.1| 30S ribosomal subunit  S4, putative [Penicillium marneffei ATCC
           18224]
 gi|210068947|gb|EEA23038.1| 30S ribosomal subunit S4, putative [Penicillium marneffei ATCC
           18224]
          Length = 439

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 57/174 (32%), Gaps = 13/174 (7%)

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS-E 283
           T+PL  + +  +   +      L++    P     +++         +  + T      E
Sbjct: 6   TTPL--SKAKIRQSWSKYNLYNLHRFRAPPTANRTFFQQK-------WTAKSTARSYHGE 56

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISIS 342
             R ++           ++      +         A   +    +      +  P  +++
Sbjct: 57  QIRESQWTRMFSRRLASVVPMNPQQLARDDGSIISAGRGSGLESEGKTLTPKRTPYTNMT 116

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
              + R + +   I +A FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 117 FAPLERRLDV--AIFRAMFASSTRQARQFVVHGAVTVNGKKMQFPGYLLNPGDL 168


>gi|298528982|ref|ZP_07016385.1| tryptophanyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510418|gb|EFI34321.1| tryptophanyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 332

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 85/293 (29%), Gaps = 40/293 (13%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
             G      G   T   LH GH    L      Q+  +     +    ++         +
Sbjct: 3   QGGEKRVVSGMRPTGP-LHLGHYFGVLQNWVDFQEN-YTCYYFVADWHAL---------T 51

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                 ++I+  +     +   +I  G      ++          +   LL  I     +
Sbjct: 52  SEYAEPRKIKPFVA---ELVKDWIASGLDPEKCVLFQQSLIKEHAELNLLLSMITPLGWL 108

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R  +++ +R  L  +   +     Y +LQA D + + +     +   G DQ  ++    
Sbjct: 109 ERNPTYKEIRQELINKDLNTHGFLGYPVLQAADIL-IYRPDFVPV---GHDQLPHLELTR 164

Query: 211 DLGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           ++  R               LT    L    G KM K+    I+L +EM +         
Sbjct: 165 EIARRFNHLYGDFLPEPQAKLTESAKLPGLDGRKMSKSYGNCIYLGEEMETIRPKVMSML 224

Query: 263 NIDDAD------------VVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKII 302
                             +  + + +T      EI            + KK++
Sbjct: 225 TDTSRMRKADPGDPEVCNLYPYHRLMTPEETCREIRENCTQAKWGCVDCKKLL 277


>gi|297180168|gb|ADI16390.1| ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit (s4 paralog) [uncultured bacterium
           HF130_12L15]
          Length = 129

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +   +  A    S + A R ++S A+++N   I+     +K+ D
Sbjct: 9   IDKWLFFARVVKSRSLAARLVQSGAVRVNREKIAQPAFPVKVGD 52


>gi|302660531|ref|XP_003021944.1| hypothetical protein TRV_03930 [Trichophyton verrucosum HKI 0517]
 gi|291185865|gb|EFE41326.1| hypothetical protein TRV_03930 [Trichophyton verrucosum HKI 0517]
          Length = 509

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 40/118 (33%), Gaps = 5/118 (4%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI---HSQHMP 337
             E  R ++ +       + ++  +   +         A   +             Q  P
Sbjct: 67  HGEQVRESQWERMFSRRLRAVVPMDPFDLARNDGSKNAAGRGSGMDKGGKEDGRQVQDTP 126

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + ++   + R + +   I +A FA+ST +AR+ +    + +N   +      +   D
Sbjct: 127 YMLMTFAPLERRLDV--AIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYLLNPGD 182


>gi|71399233|ref|XP_802734.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70864738|gb|EAN81288.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 525

 Score = 42.8 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            Y G   +A S+H GH+   +L  +LQ     P+ +
Sbjct: 212 LYTGRGPSARSMHIGHVIPFLLTRYLQDALGLPLVI 247


>gi|330996056|ref|ZP_08319950.1| tryptophan--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574053|gb|EGG55631.1| tryptophan--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 364

 Score = 42.8 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 98/352 (27%), Gaps = 42/352 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K         ++         +  +   ++++
Sbjct: 13  PTGK-LHIGHYVGSLRRRVELQNSGQFDKIFIFEADAQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGIDPAKSTIFIQSQIPELCELSFYFMDLVSVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  R     
Sbjct: 122 RNFEASIPVGF--FAYPISQAADITAFK----ATTVPVGEDQEPMLEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
              L  P +             T    KM K+L   I+L+          +      +  
Sbjct: 176 GDTLVEPNILLPENAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVEKKIRTMYTDPNHL 235

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            VS   ++    +                       E     + R               
Sbjct: 236 KVSDPGQVEGNTVFTYLDAFSRPEHFGRYLPDYADLEELKAHYRRGGLGDVKVKKFL--- 292

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST-------NEARRHLK 373
            ++  + +  I   + E  + +  +  ++K G   +        +E R+ +K
Sbjct: 293 AAVMQEELEPIRQRRKEFEQDIPAVYEMLKNGCEAARAVAADTLSEVRKAMK 344


>gi|298504578|gb|ADI83301.1| S4 domain protein [Geobacter sulfurreducens KN400]
          Length = 65

 Score = 42.8 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           + L + +  A    S  EA+  +   A+++N  
Sbjct: 8   IKLDSFLKAANLVASGGEAKIIIAEGAVRVNGE 40


>gi|289578445|ref|YP_003477072.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528158|gb|ADD02510.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 327

 Score = 42.8 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 62/210 (29%), Gaps = 31/210 (14%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             + G   T   +H G+      +      Q   ++    +    ++             
Sbjct: 3   RVFSGVQPTGD-IHIGNYLG--AMRQFVALQD-DYECFFCVVDLHALT----------VP 48

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNR 152
               +++EN      +   ++  G       +         +     L  +    +    
Sbjct: 49  QDPIKLKEN---TIELAGLYLAIGLDPKKVTLFVQS----HVAAHAELAWLLQCMTYFGE 101

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +      + + K ++++S   F Y  L A D +     Y+      G DQ  ++    D+
Sbjct: 102 LSRMTQFKEKSKGKETVSVGLFTYPDLMAADIL----LYNTHYVPVGEDQKQHLELTRDI 157

Query: 213 GERLK--TPKLFALTSPLLTTASGTKMGKT 240
            +R      + F +  P++       M  T
Sbjct: 158 AQRFNNRFGETFVVPEPMILKLGARIMSLT 187


>gi|226305497|ref|YP_002765457.1| tryptophanyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229489670|ref|ZP_04383533.1| tryptophan-tRNA ligase [Rhodococcus erythropolis SK121]
 gi|226184614|dbj|BAH32718.1| tryptophanyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229323767|gb|EEN89525.1| tryptophan-tRNA ligase [Rhodococcus erythropolis SK121]
          Length = 344

 Score = 42.8 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 76/243 (31%), Gaps = 35/243 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                 G   T+ S H G+      L     LQ         +    +            
Sbjct: 12  KPRVLSGIQPTSDSFHLGNYLG--ALQQWVPLQD-DFDAFYFIPDLHA------------ 56

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            +  +Q+ +E   + K   +  +  G     A +          +   +L  I  F   +
Sbjct: 57  -ITVTQDPKELRRRTKVAVAQLLAVGIDPDRATLFVQSQVPEHAQLAWVLNCITGFGEAS 115

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +   + S   F Y +L A D + L +     +   G DQ  ++    D
Sbjct: 116 RMTQFKD-KSAKQGSDNASVGLFTYPVLMAADIL-LYRPQRVPV---GEDQRQHLELARD 170

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L  R      K F +  P +   +           KM K+ + A  L   +  P    + 
Sbjct: 171 LAGRFNTRYGKAFVVPEPQIIKGTAKIYDLQDPTAKMSKSAASAAGLINLLDDPKVSAKK 230

Query: 261 WRN 263
            ++
Sbjct: 231 IKS 233


>gi|189192653|ref|XP_001932665.1| tryptophanyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187978229|gb|EDU44855.1| tryptophanyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 493

 Score = 42.8 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 73/254 (28%), Gaps = 24/254 (9%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD+         Y G   ++ ++H GH        WLQ     P+ +
Sbjct: 84  RGLFFSHRDLELILDVYERGDDFLLYTGRGPSSDAMHIGHTIPFEFTKWLQDVFDVPLVI 143

Query: 74  MGGGTSIIGD---PSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---------YGTGKT 121
                 ++ D     F+++ ++    +  ++N + I  I     K         + +G  
Sbjct: 144 ------MLTDDEKFLFKEKLKQEEVYEFSRQNAKDIISIGFDVKKTFMYIDSEFFTSGYN 197

Query: 122 DALMLNNETW----LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
               LN   +      +           +    N   + + V +         + E    
Sbjct: 198 RHFSLNTTEFEKLITNNQVRGAFGFHGSTNIGSNAFAAKQCVAA-FASSYPFIWGEDYKT 256

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
             ++     +     C +      +     CG       K   + +     L  A G   
Sbjct: 257 YRRSKKLAAIPCLIPCAIDQDPYFRLVRENCGRMDLPSPKPALIHSKFLTALQGAGGKMS 316

Query: 238 GKTLSGAIWLNKEM 251
               + AI+++   
Sbjct: 317 ASNANSAIFMSDTP 330


>gi|220931740|ref|YP_002508648.1| Tryptophanyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219993050|gb|ACL69653.1| Tryptophanyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 333

 Score = 42.8 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 99/343 (28%), Gaps = 45/343 (13%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRD 88
           +  +       G   T   LH GH    +     LQK  +    ++    ++        
Sbjct: 1   MAEKKKKRILTGDRPTGK-LHLGHYVGSLQNRVRLQKE-YDTFLIIADVQAL-------- 50

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
                  + E  E + +     ++         +   +  ++     +  +L        
Sbjct: 51  -----TTNFETPEKLSRDVRQVATDYLAVGIDPEVTTIFVQS--MVPEIAELTVFYSMIV 103

Query: 149 SVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           +VN++    +++S         +++    Y + QA D           L   G DQ  +I
Sbjct: 104 TVNQLRHNPTIKSEAAQYGYNDMTYGFLGYPVSQAADIT----FCKANLVPVGEDQLPHI 159

Query: 207 ICGIDLGERLKT---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
                +  +              L +    L+     +KM K+L  AI+L+         
Sbjct: 160 EQTRRIVRKFNNLYAPVFPEPEALVSDIPRLVGLDGKSKMSKSLDNAIYLSDSEEEVNRK 219

Query: 258 WQYWR------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            Q               + +   V  + K   +  ++EI+   +         KK +A  
Sbjct: 220 VQKAVTDPARIRKTDPGHPEVCTVFEYHKAFNSDEVNEIEEKCRAGKIGCVACKKRLAEV 279

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
           +  ++    E         +  D  + +       I K  +  
Sbjct: 280 LNNLLEPMRERRVKYEQNPDIVDEILMAGTKKVREIGKKTLEE 322


>gi|300024100|ref|YP_003756711.1| RNA-binding S4 domain protein [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525921|gb|ADJ24390.1| RNA-binding S4 domain protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 302

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           P  S + +     M +   + +AG   S  EA R +    + +N  ++     ++  +D
Sbjct: 25  PITSNTAETRDGPMRIAKAMARAGLC-SRREAERWIADGRVSVNGKLLKTPACEVGPKD 82


>gi|119899681|ref|YP_934894.1| 30S ribosomal protein S4 [Azoarcus sp. BH72]
 gi|152060933|sp|A1KB02|RS4_AZOSB RecName: Full=30S ribosomal protein S4
 gi|119672094|emb|CAL96008.1| 30S ribosomal protein S4 [Azoarcus sp. BH72]
          Length = 209

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GF  S  EAR+ ++ N + +N   ++     ++  D     
Sbjct: 90  GENLLQLLEGRLDSVAYRMGFGASRAEARQVVRHNGVLVNGKRVNIPSYTVRPGDVIELA 149

Query: 401 NIKLSFGKKNHIICH 415
                 G K H+   
Sbjct: 150 E-----GTKGHLRVK 159


>gi|70988895|ref|XP_749299.1| tryptophanyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66846930|gb|EAL87261.1| tryptophanyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159128713|gb|EDP53827.1| tryptophanyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 416

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 70/258 (27%), Gaps = 53/258 (20%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQ--LMLLFWLQKTGH 68
              RG +    +    LD          Y G   ++ S+H GH          ++     
Sbjct: 81  FMRRGIVFSHRDLNLILDRYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKCKYMH---- 136

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
                                     +  E+ +  +  K      I  G       + ++
Sbjct: 137 -------------------------SQKIEVDDAKKYAKANAKDIIAVGFDMKKTFIFSD 171

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             ++    Y ++         + + ++  SVR       S +  EF++   Q+      +
Sbjct: 172 FDFVGGAFYENIC-------RMAKRITINSVRGTFGFNDSNNVGEFHFCATQSATAFATS 224

Query: 189 --------KNYDCRLQM---GGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASG 234
                   +     +        DQ        +  E++K  K   + A+  P L     
Sbjct: 225 FPHIFGTDRKKVSSIPCLIPCAIDQDPYFRQCREHAEKMKYKKPSLIHAIFLPALQGPGS 284

Query: 235 TKMGKTLSGAIWLNKEMT 252
                  + AI++N    
Sbjct: 285 KMSASVETSAIFMNDAPN 302


>gi|52081501|ref|YP_080292.1| putative pseudouridine synthase YtzF [Bacillus licheniformis ATCC
           14580]
 gi|52786879|ref|YP_092708.1| hypothetical protein BLi03154 [Bacillus licheniformis ATCC 14580]
 gi|319647410|ref|ZP_08001631.1| pseudouridine synthase [Bacillus sp. BT1B_CT2]
 gi|52004712|gb|AAU24654.1| putative Pseudouridine synthase YtzF [Bacillus licheniformis ATCC
           14580]
 gi|52349381|gb|AAU42015.1| putative protein [Bacillus licheniformis ATCC 14580]
 gi|317390456|gb|EFV71262.1| pseudouridine synthase [Bacillus sp. BT1B_CT2]
          Length = 240

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M L  L+  +G   S  E ++ LK+ A+++N+ ++ + K  +  +
Sbjct: 1   MRLDKLLSNSG-YGSRKEVKKMLKNGAVRVNDQLVKDAKKHVDPE 44


>gi|288937374|ref|YP_003441433.1| tryptophanyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288892083|gb|ADC60401.1| tryptophanyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 335

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               T   G   T   LH GH    +      +  H+   L+     +         +  
Sbjct: 2   NHPQTILTGDRPTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL---------TDN 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               Q+I  +I ++       +      T   + +    L  +  + +     +    N 
Sbjct: 52  GSNPQKISHHILEVMA-DYLAVGIDPRLTTICLQSALPALAELSALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + F    Y I QA D           L   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGF--LAYPISQAADITAFK----AELVPVGDDQLPMIEQTNEI 164

Query: 213 GERLK 217
             ++ 
Sbjct: 165 VHKMN 169


>gi|213964800|ref|ZP_03392999.1| tryptophanyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952336|gb|EEB63719.1| tryptophanyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 351

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 74/244 (30%), Gaps = 31/244 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
           S        G   TA S H G+    +     LQ         +    +I          
Sbjct: 15  SARKQRVLSGIQPTADSYHLGNYLGALKNWINLQD-DFDAYYFIPDLHAI--------TV 65

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
            +  +    +          +  I  G     +++          +   +L  +  F   
Sbjct: 66  EQNPKELRQRTIAG-----AAQLIALGIDPEKSVLFVQSHVPEHAELGWVLTCLTGFGEA 120

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +RM  F+  +S  +  +  S   F Y +L A D + L +     +   G DQ  ++    
Sbjct: 121 SRMTQFKD-KSSRQGAEHTSAGLFAYPMLMAADIL-LYRPQLVPV---GEDQRQHLELTR 175

Query: 211 DLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
           +L +R      K F +  P +   S           KM K+ +    +   +  P    +
Sbjct: 176 NLAQRFNSRYKKTFVVPDPHIMEGSAKIYDLQDPTSKMSKSGANPKGIINLLDDPKVSAK 235

Query: 260 YWRN 263
             R+
Sbjct: 236 RIRS 239


>gi|195494708|ref|XP_002094954.1| GE19932 [Drosophila yakuba]
 gi|194181055|gb|EDW94666.1| GE19932 [Drosophila yakuba]
          Length = 662

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 86/274 (31%), Gaps = 42/274 (15%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSI 80
           +     +   S+     + G   T  SLH G+    +     LQ         +    SI
Sbjct: 64  TGDSGHEEHNSRWQRKIFSGIQPTG-SLHLGNYLGAVRKWVQLQNARDDVTVCIVDLHSI 122

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
                             ++ENI  +    ++ +  G   T + +          ++  +
Sbjct: 123 T----------MPHNPPLLRENIFTM---AATLLACGIDPTKSTLFVQSAVAAHAEFNWI 169

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  + +   + ++  F   +SRL ++  L    + Y +LQA D   L K     +   G+
Sbjct: 170 LSSLTTMPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAADI-MLYKATHVPV---GA 222

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTT--------------ASGTKMGKTLSGAIW 246
           DQ  +I     L +   +   +  T P+ T                   KM K+ +    
Sbjct: 223 DQIQHIQLAQHLAKTYNSR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKA 280

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
                 SP    Q  +      V  F   +T  P
Sbjct: 281 TINLCDSPDLITQKIK----KAVTDFTSDITYNP 310


>gi|38233242|ref|NP_939009.1| tryptophanyl-tRNA synthetase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199501|emb|CAE49152.1| tryptophanyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 344

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 76/244 (31%), Gaps = 31/244 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
           +Q       G   TA S H G+    +     LQ   ++    +    +I  D       
Sbjct: 9   TQKKQRVLSGIQPTADSYHLGNYLGALKQWIELQDN-YEAFYFIPDLHAITVD------- 60

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                 +E++E            +  G     + +          +   +L  +  F   
Sbjct: 61  ---QDPRELRERTIAGAAQL---LALGIDPHKSTLFVQSHVPEHAELGWVLTCLTGFGEA 114

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +RM  F+  +S  +     S   F Y +L A D + L +     +   G DQ  ++    
Sbjct: 115 SRMTQFKD-KSAKRGADRTSAGLFTYPMLMAADIL-LYRPQFVPV---GEDQRQHLELTR 169

Query: 211 DLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
            L ER      K F +   ++   +           KM K+ S    L   +  P    +
Sbjct: 170 TLAERFNSRFKKTFVVPDGIIPEGAAKIYDLQDPTSKMSKSGSNPKGLINLLDDPKVSAK 229

Query: 260 YWRN 263
             R+
Sbjct: 230 RIRS 233


>gi|114566216|ref|YP_753370.1| tryptophan--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337151|gb|ABI67999.1| tryptophanyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 331

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 69/232 (29%), Gaps = 33/232 (14%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                  G   T  SLH GH    +     LQ   +    ++    ++            
Sbjct: 3   KKKRILTGDRPTG-SLHLGHYVGSLANRVKLQDE-YDSYIIIADVQAL------------ 48

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
                E  EN+ +     ++       K +   +  ++     +  +L      F +VN 
Sbjct: 49  -TTHWEKDENLSRDVFQIATDYLAAGIKPEVSTIFIQS--MIPEIHELTMYYSMFTTVNV 105

Query: 153 MLSFESVRSRLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +    ++++   +     +++    Y + QA D       +   L   G DQ  +I    
Sbjct: 106 LRHNPTIKTEAAQHGLSDMTYGFLGYPVSQAADIT----IFKADLVPVGEDQIPHIELSR 161

Query: 211 DLGERLKT-------PKL--FALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            +  R                     L+      KM K+L+ AI+L      
Sbjct: 162 KIVRRFNELYEPVLVEPQVLVGDVPRLVGLDGKDKMSKSLNNAIFLADSADE 213


>gi|295093587|emb|CBK82678.1| tryptophanyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 353

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKRRVDLQNSGKYDEIYIMVADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     +    N  +  E   
Sbjct: 61  QNIMQV-ALDYLACGIDPEKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKAEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D     K  +  +   G DQ   I    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAF-KATEVPV---GEDQMPMIEQCKEIVHKFNSVY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              L  P +             T    KM K+L   I+L+++   P +  +   ++
Sbjct: 174 GETLVDPKIVLPDNEACLRLPGTDGKAKMSKSLGNCIYLSED---PADIKKKVMSM 226


>gi|291545897|emb|CBL19005.1| tryptophanyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 354

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 26/200 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLAERVKLQNSGLYDEIYIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            NI          + Y     D    N        +  +L     +  +V R+    +V+
Sbjct: 61  HNI------LQVALDYLACGLDPEKSNIFIQSMVPELTELTFYYMNLVTVARVQRNPTVK 114

Query: 161 SRLKREQ---SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           S +K      S+    F Y I QA D       +       G DQ   +    ++  +  
Sbjct: 115 SEIKMRNFEASIPVGFFCYPISQAADITAFRATH----VPVGEDQLPMLEQCKEIVHKFN 170

Query: 218 TPKLFALTSPLLTTASGTKM 237
           T     LT P +  +S    
Sbjct: 171 TVYGDTLTDPEIVLSSNKAC 190


>gi|145225447|ref|YP_001136125.1| tryptophanyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315445800|ref|YP_004078679.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145217933|gb|ABP47337.1| tryptophanyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315264103|gb|ADU00845.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 337

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 76/238 (31%), Gaps = 37/238 (15%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT----QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           +      + G   T+ SLH G+      Q + L          + L     +   DP   
Sbjct: 3   NTTRPVVFSGAQPTSDSLHLGNALGAVSQWVSLQDGYDAYFCVVDLHAITVAQ--DP--- 57

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
             + R                    ++  G   + A +          +   +L     F
Sbjct: 58  -ATLRRRTLVTAA-----------QYLALGIDPSRATVFVQSHVPSHAELAWVLGCFTGF 105

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +RM  F+  +S+ +  ++ +   F Y +L A D +     YD  L   G DQ  ++ 
Sbjct: 106 GQASRMTQFKD-KSQKQGAEATTVGLFTYPVLMAADVL----LYDTELVPVGEDQRQHLE 160

Query: 208 CGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSP 254
              D+ +R+    P  F +   ++  A+           KM K+      L   +  P
Sbjct: 161 LARDVAQRINARFPDTFVVPEAMIPKATAKIFDLQDPTAKMSKSAESDAGLISLLDDP 218


>gi|293392659|ref|ZP_06636978.1| tryptophan-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424776|gb|EFE97986.1| tryptophan-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 340

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 77/313 (24%), Gaps = 38/313 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  ++   L+     +  + S   + R  +         
Sbjct: 19  PTGP-LHLGHFVGSLRQRVALQRDYQQFVLIADLQGLTDNGSNPQKIRDNIPEVLADYLA 77

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             I              T   + +    L  +  + +     +    N  +  E ++   
Sbjct: 78  AGI----------DPSLTTLCLQSALPALAELTALYMNIVTVARVERNPTVKNEIIQKGF 127

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------- 216
            R   + F    Y I QA D      +        G DQ   I    ++  ++       
Sbjct: 128 ARSLPVGF--LVYPISQAADITAFKADR----VPVGDDQLPMIEQTNEIVHKMNSLFPEP 181

Query: 217 ---KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS-------PYNFWQYWRNIDD 266
                  + + TS L       KM K+L   + L+    +        Y    + +  D 
Sbjct: 182 VLRHCKAMLSETSRLPGIDGNAKMSKSLGNTLLLSASEETIHRAVGAMYTDANHLKVTDP 241

Query: 267 ADV---VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
             V   + F                K   +               M      A      A
Sbjct: 242 GQVTGNMVFTYLDAFHSDKAKVAEMKAHYQRGGLG-DRTCKNELEMCLQELIAPMRELRA 300

Query: 324 MECFDMSIHSQHM 336
               D  +    +
Sbjct: 301 TYIQDKGMLMALL 313


>gi|189426809|ref|YP_001949908.1| hypothetical protein RSL1_gp033 [Ralstonia phage RSL1]
 gi|189233121|dbj|BAG41478.1| hypothetical protein [Ralstonia phage RSL1]
          Length = 57

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            S +E RR ++ ++I +N  ++ + K  I L
Sbjct: 8   ASGSEIRRWIQQSSIVVNGQVVRDPKAVIAL 38


>gi|332519519|ref|ZP_08395986.1| tryptophanyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045367|gb|EGI81560.1| tryptophanyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 326

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 89/308 (28%), Gaps = 54/308 (17%)

Query: 50  HAGH----LTQLMLLFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQEIQENI 103
           H G+    L   M L       ++    +    S+  I D     E+ R          +
Sbjct: 19  HLGNILGALIPAMALAN--DASNESYLFIADMHSLTQIKD----GETLRNNTYSTAATWL 72

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                I ++       ++D       TW            +  FF   R+    S + + 
Sbjct: 73  ALGLDIENTVF---YRQSDIPQTTELTWY-----------LSCFFPYQRLTLAHSFKDKA 118

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
            R   ++   F Y +L A D +     YD  +   G DQ  +I    D+  R  T     
Sbjct: 119 DRLDDVNAGLFTYPMLMAADIL----LYDAEIIPVGKDQLQHIEMTRDVASRFHTKMGDT 174

Query: 224 LTSP---------LLTTASGTKMGKTLSGAIWLN-------------KEMTSPYNFWQYW 261
              P         L+    G KM K+    I +              +  ++P    + W
Sbjct: 175 FVIPEAKIQEQTKLIPGTDGAKMSKSKGNTINIFLPEKKLRKQIMTIETDSTPLEEPKDW 234

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
            + +   +  ++   +   +  +    +        AK+ +   I        E      
Sbjct: 235 ASCNCFAI--YSLMASESEIETMKANYENGNYGYGHAKQALFELILKTFETERERYNYYM 292

Query: 322 AAMECFDM 329
             ++  D 
Sbjct: 293 NNLDKIDE 300


>gi|329943300|ref|ZP_08292074.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287877|ref|YP_004422778.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848449|emb|CBY17453.1| putative tryptophanyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507319|gb|ADZ18957.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814847|gb|EGF84837.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328915139|gb|AEB55972.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 345

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 33/246 (13%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH    +     LQ    +    ++    ++         +
Sbjct: 2   NKKKRVLTGDRPTGK-LHLGHWVGSIKNRLDLQNNPAYDCFFIVADLHTL--------TT 52

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R         +N   I  + + ++  G     + +          +  +L        S+
Sbjct: 53  RVRKEQVLDVDN--HIYEVLADWLSVGIDPNKSTIYLQSAI---PEIYELHLLFSMLISI 107

Query: 151 NRMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           NR++      E  ++    E  LS     Y +LQ+ D +        +L   G D   +I
Sbjct: 108 NRIMGIPSLKEMAKNASIEEGGLSLGLVGYPVLQSADIL----LAKAQLVPVGKDNEAHI 163

Query: 207 ICGIDLGE---------RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
               D+             +   L    + L+      KM K+ + AI+L+ +  +  + 
Sbjct: 164 ELTRDIARNFNRLYGEIFPEPETLQGELTSLVGIDGQGKMSKSANNAIYLSDDDATIKDK 223

Query: 258 WQYWRN 263
            +    
Sbjct: 224 IRKMYT 229


>gi|239929353|ref|ZP_04686306.1| tryptophanyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291437683|ref|ZP_06577073.1| tryptophanyl-tRNA synthetase 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291340578|gb|EFE67534.1| tryptophanyl-tRNA synthetase 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 337

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 73/256 (28%), Gaps = 33/256 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   T+ S H G+    +     +Q T H    ++    + +  P    E
Sbjct: 1   MASERPRVLSGIQPTSGSFHLGNYLGAVRQWVDMQNT-HDAFYMVVDLHA-VTVPQDPKE 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A       WL +      +   G    
Sbjct: 59  LRENTRVAAAQLLAAGLDPDRCTLFVQSHVPEHA----QLGWLMN-----CITGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S  +     +   F Y +L   D + L +     +   G DQ  ++   
Sbjct: 110 MTQFKD----KSARQGSDRTTVGLFTYPMLMVADIL-LYQADQVPV---GEDQRQHLELT 161

Query: 210 IDLGERLKTPKLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            DL +R         T P   +   +           KM K+ S    L   +  P    
Sbjct: 162 RDLADRFNQTYGDTFTVPSAYILKETAKIYDLQDPTIKMSKSASTPKGLINLLDEPKTTA 221

Query: 259 QYWRN--IDDADVVSF 272
           +  ++   D   V+ +
Sbjct: 222 KKVKSAVTDTDTVIRY 237


>gi|255323628|ref|ZP_05364758.1| S4 domain protein [Campylobacter showae RM3277]
 gi|255299342|gb|EET78629.1| S4 domain protein [Campylobacter showae RM3277]
          Length = 257

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +K   + +N  +IS     +  +D        +   KK   + 
Sbjct: 17  SRREADELIKQGKVSVNGRVISELATSVSDEDKVKINGRIVRL-KKEFTMI 66


>gi|294775216|ref|ZP_06740740.1| pseudouridylate synthase [Bacteroides vulgatus PC510]
 gi|294450921|gb|EFG19397.1| pseudouridylate synthase [Bacteroides vulgatus PC510]
          Length = 488

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 248 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 306

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 307 SIERKTYILLN 317


>gi|255534341|ref|YP_003094712.1| Tryptophanyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340537|gb|ACU06650.1| Tryptophanyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 322

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 90/331 (27%), Gaps = 45/331 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWL-QKTGHKPISLMGGGTSIIGDPSFRDE-SRRMMRSQ 97
           G   T +  H G+L   ++    L +K+ ++    +    S+      ++    R    +
Sbjct: 7   GIQATGTP-HLGNLLGAIIPAIELSKKSDNESFLFIANLHSL---TQIKNAGELRQNTYE 62

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                +        +   +   ++D   +   +W            +  FF   R+    
Sbjct: 63  IAAAWLACG---LDTDKTFFYRQSDIPEVCELSWY-----------LSCFFPYQRLTLAH 108

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           S + +  R + ++   F Y +L   D +     YD  +   G DQ  ++    D+G R  
Sbjct: 109 SFKDKADRLEDVNAGLFTYPVLMGADIL----LYDAEVVPVGKDQLQHLEMARDMGSRFN 164

Query: 218 TPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                    P          +    G KM K+    I +                   + 
Sbjct: 165 HQMGEVFVLPTAELQEETKYVPGTDGQKMSKSRGNIINIFLPEKELKKQVMGIETDSKSL 224

Query: 269 VVS-----------FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
                         F    T      +             AK  +   I T      E  
Sbjct: 225 EEPKDPETDKVFAIFKLIATAEEAEFLREKYLAGNFGYGHAKTELLNLILTKFARERELF 284

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSR 348
                 +   +  + +    T  I+   +S+
Sbjct: 285 SYYMNNLPELEEKLQAGATKTREIAAKTLSK 315


>gi|254884798|ref|ZP_05257508.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           4_3_47FAA]
 gi|319644140|ref|ZP_07998665.1| pseudouridine synthase [Bacteroides sp. 3_1_40A]
 gi|254837591|gb|EET17900.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           4_3_47FAA]
 gi|317384262|gb|EFV65233.1| pseudouridine synthase [Bacteroides sp. 3_1_40A]
          Length = 487

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 247 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 305

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 306 SIERKTYILLN 316


>gi|237708147|ref|ZP_04538628.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           9_1_42FAA]
 gi|229457700|gb|EEO63421.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           9_1_42FAA]
          Length = 485

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 245 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 303

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 304 SIERKTYILLN 314


>gi|237723682|ref|ZP_04554163.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D4]
 gi|265756803|ref|ZP_06090791.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_1_33FAA]
 gi|229437893|gb|EEO47970.1| ribosomal large subunit pseudouridine synthase B [Bacteroides dorei
           5_1_36/D4]
 gi|263233589|gb|EEZ19209.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_1_33FAA]
          Length = 485

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 245 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 303

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 304 SIERKTYILLN 314


>gi|150004186|ref|YP_001298930.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           vulgatus ATCC 8482]
 gi|149932610|gb|ABR39308.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           vulgatus ATCC 8482]
          Length = 488

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 248 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 306

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 307 SIERKTYILLN 317


>gi|291451731|ref|ZP_06591121.1| tryptophanyl-tRNA synthetase 2 [Streptomyces albus J1074]
 gi|291354680|gb|EFE81582.1| tryptophanyl-tRNA synthetase 2 [Streptomyces albus J1074]
          Length = 337

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 69/245 (28%), Gaps = 31/245 (12%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +        G   TA S H G+    +     LQ+T H    ++    + I  P    E
Sbjct: 1   MASDRPRVLSGIQPTAGSFHLGNYLGAVRQWVALQET-HDAFYMVVDLHA-ITVPQDPAE 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R   R    Q     +     +          A +            ++ L   G    
Sbjct: 59  LRANTRLAAAQLLAAGLDPERCTLFVQSQVPEHAQLGW---------VMNCLTGFGEASR 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + +       +S  +     +   F Y +L   D + L +     +   G DQ  ++   
Sbjct: 110 MTQFKD----KSAKQGNDRTTVGLFTYPMLMVADIL-LYQADQVPV---GEDQRQHLELT 161

Query: 210 IDLGERLKTPKLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
             L ER         T P   +   +           KM K+ +    L   +  P    
Sbjct: 162 RTLAERFNGTYGETFTVPGAYILKETAKIYDLQDPTAKMSKSAANPKGLINLLDEPKATM 221

Query: 259 QYWRN 263
           +  ++
Sbjct: 222 KKIKS 226


>gi|254718615|ref|ZP_05180426.1| Cell division protein FtsJ [Brucella sp. 83/13]
 gi|265983592|ref|ZP_06096327.1| hemolysin A [Brucella sp. 83/13]
 gi|306839867|ref|ZP_07472665.1| hemolysin A [Brucella sp. NF 2653]
 gi|264662184|gb|EEZ32445.1| hemolysin A [Brucella sp. 83/13]
 gi|306405053|gb|EFM61334.1| hemolysin A [Brucella sp. NF 2653]
          Length = 253

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V+ GF  + + AR  ++   +K++   I+     +   
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVASD 54


>gi|329962615|ref|ZP_08300563.1| tryptophan--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529646|gb|EGF56544.1| tryptophan--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 380

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 72/257 (28%), Gaps = 32/257 (12%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGT 78
           +N                 G   T   LH GH    +     LQ +G   K    +    
Sbjct: 7   TNKELKKYKNMAKEKIILTGDRPTGR-LHIGHYVGSLRRRVELQNSGLYDKTFVFIADAQ 65

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++         +  M   +++++N+ ++  +          K+   + +    LC + + 
Sbjct: 66  AL---------TDNMENPEKVRQNVIEV-ALDYLACGLDPTKSTIFIQSQIPELCELTFY 115

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +     S    N  +  E      +    + F  F Y I QA D               
Sbjct: 116 YMDLVTVSRLQRNPTVKTEIQMRNFETSIPVGF--FTYPISQAADITAFR----ATTVPV 169

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLT------------TASGTKMGKTLSGAIW 246
           G DQ   I    ++  R        L  P +             T    KM K+L   I+
Sbjct: 170 GEDQEPMIEQAREIVRRFNYIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIY 229

Query: 247 LNKEMTSPYNFWQYWRN 263
           L+          +    
Sbjct: 230 LSDTADEVQKKVKSMYT 246


>gi|325115456|emb|CBZ51011.1| tryptophanyl-tRNAsynthetase,related [Neospora caninum Liverpool]
          Length = 607

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            Y G   ++ +LH GHL   M   +LQ 
Sbjct: 294 LYTGRGPSSEALHIGHLVPFMFTKYLQD 321


>gi|291533003|emb|CBL06116.1| Tryptophanyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 223

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 20/178 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++++
Sbjct: 11  PTGR-LHIGHYVGSLKRRVELQNSGEFEKIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC +    +     S    N  +  E   
Sbjct: 61  QNVLEV-ALDYLACGIDPKKSTIFVQSQIPQLCELTCYYMNLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +    + F    Y + QA D               G DQ   I    ++  R   
Sbjct: 120 RNFEASIPVGF--LAYPVSQASDITAFK----ATTVPVGEDQEPMIEQTREIVRRFNM 171


>gi|302345864|ref|YP_003814217.1| pseudouridylate synthase [Prevotella melaninogenica ATCC 25845]
 gi|302150213|gb|ADK96475.1| pseudouridylate synthase [Prevotella melaninogenica ATCC 25845]
          Length = 514

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 33/96 (34%), Gaps = 1/96 (1%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             +     +     +          + +  + L   +  AG   S  EA   + S A+ +
Sbjct: 249 QHSTDYDPNAKYSLKKRIEYKEENYDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTV 307

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           N  ++     ++   D     +  +S  KK +++ +
Sbjct: 308 NGEVVKELGSKVMRTDEVYFQDKLVSLEKKVYVLLN 343


>gi|330013704|ref|ZP_08307767.1| tryptophan--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328533370|gb|EGF60112.1| tryptophan--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 335

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               T   G   T   LH GH    +      +  H+   L+     +         +  
Sbjct: 2   NHPQTILTGDRPTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL---------TDN 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               Q+I  +I ++       +      T   + +  + L  +  + +     +    N 
Sbjct: 52  GSNPQKISHHILEVMA-DYLAVGIDPRLTTICLQSALSALAELSALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + F    Y I QA D           L   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGF--LAYPISQAADITAFK----AELVPVGDDQLPMIEQTNEI 164

Query: 213 GERLK 217
             ++ 
Sbjct: 165 VHKMN 169


>gi|307595749|ref|YP_003902066.1| tryptophanyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550950|gb|ADN51015.1| tryptophanyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 374

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           L  RGF +   + + +      G     Y G   +A  LH GHL   ML  W   
Sbjct: 48  LIRRGFFYAHRDLQSILNRQRSGLRWALYNGRGPSAD-LHIGHLVPWMLSKWFVD 101


>gi|147677573|ref|YP_001211788.1| tryptophanyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273670|dbj|BAF59419.1| tryptophanyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 324

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 72/233 (30%), Gaps = 32/233 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +  SLH G+   +M  +   Q+       L+    ++    S  D    ++R Q  
Sbjct: 6   GIQPSG-SLHLGNYFGMMKRMVEYQENNELFCFLV-NYHAL---TSVFDAE--LLRRQTF 58

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +   + +             ++D   +   TWL           + +   +  +    S 
Sbjct: 59  EAACDFLALGLDPEKSVFWVQSDVQEVTELTWL-----------LSNVTGMGLLERSHSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           + +  +    S   F Y +L A D +     Y       G DQ  ++    D+  R    
Sbjct: 108 KDKTAKGIPASHGLFAYPVLMAADIL----LYGAEKVPVGKDQKQHLEIARDIAIRFNNT 163

Query: 218 TPKLFALTSPLLTTA-------SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +  P +  +        G KM K+   AI +              + 
Sbjct: 164 YGETFVVPEPDIEESVATVPGIDGQKMSKSYGNAIEIFAGEKEMREKVMKIKT 216


>gi|85680329|gb|ABC72358.1| tryptophanyl-tRNA synthetase [Haloquadratum walsbyi]
          Length = 606

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I        +     +   V    G+  T    H GH      + W Q+ G   
Sbjct: 109 LMRRGVIFGHRGYDPVAEALQNNDPVAVLSGFMPTGDP-HIGHKLVFDEIIWHQQRGADA 167

Query: 71  ISLMGG 76
            +L+  
Sbjct: 168 YALIAD 173


>gi|150866939|ref|XP_001386705.2| hypothetical protein PICST_50481 [Scheffersomyces stipitis CBS
           6054]
 gi|149388195|gb|ABN68676.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 471

 Score = 42.4 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG--NIKLSFGKKN 410
           FA+S  +AR  +   ++ +N  +I +    +K  D        + L+ G+  
Sbjct: 114 FASSVRQAREFILGGSVSVNGVVIKHPSFPLKSGDIFHVKPEKVLLAMGRTK 165


>gi|297616728|ref|YP_003701887.1| tryptophanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144565|gb|ADI01322.1| tryptophanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM
           12680]
          Length = 327

 Score = 42.4 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 29/234 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GHL+ L     LQ+T ++    +    ++                 E +
Sbjct: 8   GMRPTGK-LHIGHLSVLRNWVMLQET-YRCFFAIVDWHAL------------TTSFDETE 53

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESV 159
              E I+ +F  ++  G     + +          +   LL  +     + R     E +
Sbjct: 54  IIQENIRDMFLDWLSVGLDPAKSAVFVQSHVKEHAELHLLLSMVTPVSWLERCPTYKEQI 113

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +   K  + +S   F  Y +L A D + + K     +   G DQ  ++    ++  R   
Sbjct: 114 QELGKEGKDISTYGFLGYPLLMAADIL-VYKADTVPV---GKDQLPHLELCREIARRFNY 169

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                    P+      P++    G KM K+ +  I L        +  +    
Sbjct: 170 LFNVSLFPEPQALLSKVPVIPGIDGRKMSKSYNNYISLTDSTEEIRDKTRMMIT 223


>gi|297571264|ref|YP_003697038.1| RNA-binding S4 domain protein [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931611|gb|ADH92419.1| RNA-binding S4 domain protein [Arcanobacterium haemolyticum DSM
           20595]
          Length = 75

 Score = 42.4 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I + +V   + L   +  AG   +  +AR  ++   +++NN I ++   ++   D     
Sbjct: 2   IEEFDVRLPIQLGQFVKLAGLTETGGQAREVIQEGWVRVNNEINTHRSAKLADGDVVDVR 61

Query: 401 N 401
            
Sbjct: 62  Y 62


>gi|71402184|ref|XP_804035.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70866783|gb|EAN82184.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 164

 Score = 42.4 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 22  SNPRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           +    +    + G   AY+  G   +A S+H GH    +L  +LQ     P+ +
Sbjct: 64  TALDCVRASLATGTHRAYLYTGRGPSAQSMHIGHCIPFLLTRYLQDALGLPLVI 117


>gi|163744706|ref|ZP_02152066.1| tryptophanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161381524|gb|EDQ05933.1| tryptophanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 338

 Score = 42.4 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 69/209 (33%), Gaps = 28/209 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              + G   +   LH G+      L      Q+ G + I  M    +             
Sbjct: 8   PRVFSGIQPSGD-LHLGNYLG--ALKRFADAQEQGVQSIYCMVDLHA------------- 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +   Q+ ++  +  + + + FI  G     ++++N        +   +   +     + R
Sbjct: 52  ITVPQKPEDLKKSTRELCAGFIASGIDPEKSILINQSQVPEHAQLAWVFNCVARMGWMGR 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  ++      K  ++ S   F Y  L A D + +       +   G DQ  ++    D+
Sbjct: 112 MTQWKD--KAGKNAEAASLGLFAYPALMAADIL-IYHATHVPV---GEDQKQHLELTRDI 165

Query: 213 GERLKTP---KLFALTSPLLTTASGTKMG 238
             +         F LT P++  A+   M 
Sbjct: 166 AAKFNHDYGVDFFPLTEPVIEGAATRVMS 194


>gi|330719864|gb|EGG98351.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 45

 Score = 42.4 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDL 44
          M +  ++ L I+  RG    +     +  L S   +    G+D 
Sbjct: 1  MTSM-AETLDIIK-RGADEILLEEELVKKLESGKPLRVKAGFDP 42


>gi|326796385|ref|YP_004314205.1| pseudouridine synthase Rsu [Marinomonas mediterranea MMB-1]
 gi|326547149|gb|ADZ92369.1| pseudouridine synthase Rsu [Marinomonas mediterranea MMB-1]
          Length = 228

 Score = 42.4 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHI 412
           S  EA+R +    I++N  +++     +      +S G + L   K+ + 
Sbjct: 14  SRKEAKRFIAKGKIRVNGDVVTKPNASVTEDCKVESHGEVILWR-KEKYF 62


>gi|307297760|ref|ZP_07577566.1| RNA-binding S4 domain protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306917020|gb|EFN47402.1| RNA-binding S4 domain protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 231

 Score = 42.4 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S +E+RR ++SN + +N  + +N    +   D
Sbjct: 14  SRSESRRIIRSNGVSLNGVLTNNPSEVVDETD 45


>gi|237508275|ref|ZP_04520990.1| tryptophan--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|235000480|gb|EEP49904.1| tryptophan--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 346

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
             R+    F    Y + QA D               G DQ   I    ++  R
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRR 174


>gi|156096242|ref|XP_001614155.1| tryptophan--tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803029|gb|EDL44428.1| tryptophan--tRNA ligase, putative [Plasmodium vivax]
          Length = 645

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 63/222 (28%), Gaps = 15/222 (6%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
            L+          Y G   ++ S+H GHL       +LQ   + P+ +            
Sbjct: 294 LLNSYEQHKCFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLVI-----------Q 342

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             D+ + +       E I  +       I       +   +   T      Y  +L    
Sbjct: 343 MSDDEKFLFNQNYSLEYINTLTKENVKDIIAVGLNPELTFIFKNTQYAGYLYPTVLSIH- 401

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
              ++N+ ++     +       +S+  F      +  F +        L   G DQ   
Sbjct: 402 KKTTLNQSMNVFGF-NHSDNIGKISYPSFQIAPCFSQCFPQFLPPNIPCLVPQGIDQDPY 460

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTAS--GTKMGKTLSGAI 245
                D+  ++   K   + S  +       TKM  T     
Sbjct: 461 FRLSRDIAVKMALHKPVVVHSVFMPGLQGVNTKMSSTKKKDE 502


>gi|217422230|ref|ZP_03453733.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 576]
 gi|254193766|ref|ZP_04900198.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169650517|gb|EDS83210.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|217394461|gb|EEC34480.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 346

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
             R+    F    Y + QA D               G DQ   I    ++  R
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRR 174


>gi|56416291|ref|YP_153366.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197365215|ref|YP_002144852.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56130548|gb|AAV80054.1| trpS-like protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197096692|emb|CAR62314.1| trpS-like protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 337

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 23/177 (12%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T  SLH GH      L     LQ+  H+   L+     +         +      Q+I+
Sbjct: 13  PTG-SLHLGHYVG--SLRQHVALQQ-DHQQYVLIADLQGL---------TDNGSNPQKIR 59

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++       +      T   + +    L  +  + +     +    N  +  E  +
Sbjct: 60  DNIPQVLA-DYLAVGIDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQ 118

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R   + F    Y I QA D           +   G DQ   I    ++  ++ 
Sbjct: 119 KGFTRSLPVGF--MAYPISQAADITAFK----AEMVPVGDDQLPMIEQTNEIVHKMN 169


>gi|11499766|ref|NP_071009.1| hypothetical protein AF2184 [Archaeoglobus fulgidus DSM 4304]
 gi|2648341|gb|AAB89068.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 208

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 21/40 (52%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ GF +S + A+  +K   + ++   ++    ++  +
Sbjct: 6   LLVRRGFFSSRSRAKEAIKKGFVLVDGKKVTKPSAEVDFE 45


>gi|126457253|ref|YP_001076558.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 1106a]
 gi|242311663|ref|ZP_04810680.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|126231021|gb|ABN94434.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242134902|gb|EES21305.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 346

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
             R+    F    Y + QA D               G DQ   I    ++  R
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRR 174


>gi|167724752|ref|ZP_02407988.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei DM98]
 gi|167899316|ref|ZP_02486717.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 7894]
 gi|167915992|ref|ZP_02503083.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 112]
 gi|167923836|ref|ZP_02510927.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei BCC215]
 gi|254184802|ref|ZP_04891391.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184215394|gb|EDU12375.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 346

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
             R+    F    Y + QA D               G DQ   I    ++  R
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRR 174


>gi|53716475|ref|YP_105053.1| tryptophanyl-tRNA synthetase II [Burkholderia mallei ATCC 23344]
 gi|67643138|ref|ZP_00441886.1| tryptophan--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121597311|ref|YP_991009.1| tryptophanyl-tRNA synthetase II [Burkholderia mallei SAVP1]
 gi|124382585|ref|YP_001025409.1| tryptophanyl-tRNA synthetase II [Burkholderia mallei NCTC 10229]
 gi|126443775|ref|YP_001063662.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 668]
 gi|126447438|ref|YP_001077472.1| tryptophanyl-tRNA synthetase II [Burkholderia mallei NCTC 10247]
 gi|134278622|ref|ZP_01765336.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167002340|ref|ZP_02268130.1| tryptophan--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254177298|ref|ZP_04883954.1| tryptophanyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254186021|ref|ZP_04892539.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254202988|ref|ZP_04909350.1| tryptophanyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208320|ref|ZP_04914669.1| tryptophanyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|52422445|gb|AAU46015.1| tryptophanyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121225109|gb|ABM48640.1| tryptophanyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|126223266|gb|ABN86771.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126240292|gb|ABO03404.1| tryptophan--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134250406|gb|EBA50486.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147746033|gb|EDK53111.1| tryptophanyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751007|gb|EDK58075.1| tryptophanyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|157933707|gb|EDO89377.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|160698338|gb|EDP88308.1| tryptophanyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238524398|gb|EEP87831.1| tryptophan--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243061988|gb|EES44174.1| tryptophan--tRNA ligase [Burkholderia mallei PRL-20]
 gi|261826872|gb|ABM99667.2| tryptophan--tRNA ligase [Burkholderia mallei NCTC 10229]
          Length = 346

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
             R+    F    Y + QA D               G DQ   I    ++  R
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRR 174


>gi|53722884|ref|YP_111869.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei K96243]
 gi|76818779|ref|YP_336114.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 1710b]
 gi|167743699|ref|ZP_02416473.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 14]
 gi|167820890|ref|ZP_02452570.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 91]
 gi|167829244|ref|ZP_02460715.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 9]
 gi|167850717|ref|ZP_02476225.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei B7210]
 gi|167907654|ref|ZP_02494859.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei NCTC
           13177]
 gi|226195696|ref|ZP_03791283.1| tryptophan--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254263184|ref|ZP_04954049.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254301081|ref|ZP_04968525.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|52213298|emb|CAH39341.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76583252|gb|ABA52726.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157810715|gb|EDO87885.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|225932181|gb|EEH28181.1| tryptophan--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254214186|gb|EET03571.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 346

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
             R+    F    Y + QA D               G DQ   I    ++  R
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRR 174


>gi|167840515|ref|ZP_02467199.1| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis MSMB43]
          Length = 346

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ T H+   L+    ++         +       +++ N
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQDT-HRQFILVADTQAL---------TDNAHDPDKVRRN 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     ++   + +    L  +    L     +    N  +  E     
Sbjct: 69  VIEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R+    F    Y + QA D               G DQ   +    ++  R+   
Sbjct: 128 FGRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLVEQTNEIVRRINRQ 178


>gi|330443971|ref|YP_004376957.1| tryptophanyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807081|gb|AEB41254.1| tryptophanyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 347

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 103/345 (29%), Gaps = 47/345 (13%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH    +     LQ    ++   ++    ++          
Sbjct: 2   NKKKRILTGDRPTGK-LHLGHWIGSIKNRLELQNHPEYECFFIIADLHTM-------TTK 53

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
            R     ++  N+     + + ++  G   T + +          +  +L        S+
Sbjct: 54  VRKEEVLDVDNNV---YEVLADWLSVGIDPTKSTIYLQSLI---PEIYELHLLFSMLISI 107

Query: 151 NRMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           NR++      E  ++    E  LS+    Y +LQ+ D +        +L   G D   +I
Sbjct: 108 NRVMGIPSLKEMAKNASIEEGGLSYGLIGYPVLQSADIL----LAKAQLVPVGKDNEAHI 163

Query: 207 ICGIDLGE---------RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
               D+             +   L    + L+      KM K+ + AI+L+ +  +    
Sbjct: 164 ELTRDIARNFNRLYGEIFPEPEVLQGELTSLVGIDGQGKMSKSANNAIYLSDDEATIQEK 223

Query: 258 WQYWR------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
            +                ++   V  +            D   + +   I   E K  +A
Sbjct: 224 VRRMYTDPSRIHATTPGRVEGNPVFIYHDLFNPNKDEVEDFKTRYRQGNIKDTEVKARLA 283

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
            EI + +    E      A  +    ++    +    ++K  +  
Sbjct: 284 EEILSFLKPFRERRMEFLAHPQLLQEALQQGTLRMREVAKATMEE 328


>gi|325295032|ref|YP_004281546.1| pseudouridine synthase Rsu [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065480|gb|ADY73487.1| pseudouridine synthase Rsu [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 238

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL--QDFDSTGNIK 403
           M L  L+  +GF  + ++ +R +K   + +N   I +    +     +    G + 
Sbjct: 1   MRLDKLLADSGF-GTRSQVKRLIKKGFVTVNGETIKDPSFNVDPQKDEVLVDGELV 55


>gi|284992779|ref|YP_003411333.1| tryptophanyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284066024|gb|ADB76962.1| tryptophanyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 340

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 24/182 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   TA S H G+      L     LQ+  H+    +    +I  D              
Sbjct: 12  GIQPTADSFHLGNYLG--ALRQWVALQQ-DHEAFYCVVDLHAITVD-------------W 55

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           + +    +     +  +  G     + +         ++   ++  +  F   +RM  F+
Sbjct: 56  DPETLRRRTLVSAAQLLALGVDPARSTLFVQSHVPEHVQLSWVMESLARFGEASRMTQFK 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +S+ +     S   F Y +LQA D + L +     +   G DQ  ++    DL  R  
Sbjct: 116 D-KSQREGAAGTSVALFTYPVLQAADIL-LYQADRVPV---GEDQRQHLELTRDLATRFN 170

Query: 218 TP 219
             
Sbjct: 171 NR 172


>gi|154147941|ref|YP_001407262.1| RNA pseudouridine synthase [Campylobacter hominis ATCC BAA-381]
 gi|153803950|gb|ABS50957.1| hypothetical RNA pseudouridine synthase (RNA-uridine isomerase)
           (RNA pseudouridylate synthase) [Campylobacter hominis
           ATCC BAA-381]
          Length = 253

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +K+  + +N  IIS+  ++I   D        +   KK+  + 
Sbjct: 14  SRREADELIKNGKVSVNGRIISDF-IEINESDKIRINKHLIKL-KKDFTMI 62


>gi|118475394|ref|YP_892916.1| pseudouridine synthase, Rsu:RNA-binding S4:pseudouridine synthase
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118414620|gb|ABK83040.1| pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Campylobacter fetus subsp. fetus 82-40]
          Length = 254

 Score = 42.0 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +K+  + INN +I N    +K  D        +   KK   I 
Sbjct: 14  SRREADELVKNGKVSINNKVIDNLATDVKEDDKIKINGRFIRL-KKEFSII 63


>gi|238892881|ref|YP_002917615.1| tryptophanyl-tRNA synthetase II [Klebsiella pneumoniae NTUH-K2044]
 gi|238545197|dbj|BAH61548.1| putative tryptophanyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 335

 Score = 42.0 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               T   G   T   LH GH    +      +  H+   L+     +         +  
Sbjct: 2   NHPQTILTGDRPTGQ-LHLGHYVGSLRQRVALQHNHQQFILIADLQGL---------TDN 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               Q+I  +I ++       +      T   + +    L  +  + +     +    N 
Sbjct: 52  GSNPQKISHHILEVMA-DYLAVGIDPRLTTICLQSALPALAELSALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + F    Y I QA D           L   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGF--LAYPISQAADITAFK----AELVPVGDDQLPMIEQTNEI 164

Query: 213 GERLK 217
             ++ 
Sbjct: 165 VHKMN 169


>gi|84489462|ref|YP_447694.1| tryptophanyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372781|gb|ABC57051.1| TrpS [Methanosphaera stadtmanae DSM 3091]
          Length = 365

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 71/239 (29%), Gaps = 28/239 (11%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +  ++ D L +        G   +   +H GH   +  L W Q+     
Sbjct: 39  LMTRGIIFGQRDYNKITDALNNNKPFATMTGMMPSGK-MHIGHKMVVDQLKWYQEKNADI 97

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    +            R +  ++ +E            +     + +  +     
Sbjct: 98  YVSIADMEAYAA---------RGISKEKSRELALNEYITNYIALGLDVTRDNFHLYLQSE 148

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-LAK 189
              +    +L   IG   + N+M      RS      S +       +LQ  D +    K
Sbjct: 149 ---NDDVKNLAYIIGKKVTFNQM------RSIYGFNNSTNIAHIYTPLLQVADILHPQLK 199

Query: 190 NYDCRLQM---GGSDQWGNIICGIDLGERLKTP----KLFALTSPLLTTASGTKMGKTL 241
            Y     +    G DQ  +I    DL  +        +  A     +T  +G KM  + 
Sbjct: 200 KYGGPKPVIVPVGPDQDPHIRLTRDLASKFNEEYGFIEPSATFHRFMTGLTGEKMSSSK 258


>gi|307292742|ref|ZP_07572588.1| RNA-binding S4 domain protein [Sphingobium chlorophenolicum L-1]
 gi|306880808|gb|EFN12024.1| RNA-binding S4 domain protein [Sphingobium chlorophenolicum L-1]
          Length = 267

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +    +  L+ +AG   S  E  R ++   I +N   I+     +
Sbjct: 26  NEPQRIAKLLARAG-VASRREVERMIEEGRITLNGEAITTPATLL 69


>gi|227528862|ref|ZP_03958911.1| tryptophan--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351224|gb|EEJ41515.1| tryptophan--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 341

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 64/238 (26%), Gaps = 39/238 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++         +      ++I+ 
Sbjct: 15  PTGK-LHIGHYVGSLKNRVRLQNTGDYNTFIMIADQQAL---------TDNARDPEKIR- 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFESV 159
             + +  +   ++  G     A +        L  +    L     +    N  +  E  
Sbjct: 64  --KSLHEVALDYLAVGIDPKKATIFVQSQIPALSELTMHYLNLVTIARLHRNPTVKTEIQ 121

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           + +        F  F Y + QA D               G DQ   +    ++       
Sbjct: 122 QKKFGESVPAGF--FIYPVSQAADITAFK----ADTVPVGDDQEPMLEQTREIVRSFNRI 175

Query: 219 -------PKLFALTS------PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                                P L      KM K+L  AI+L+ +  +          
Sbjct: 176 YNEDILVEPQGVFPPKGEGRIPGL--DGNAKMSKSLGNAIYLSDDADTVQKKVMSMYT 231


>gi|288869787|ref|ZP_05976326.2| tryptophan--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860247|gb|EFC92545.1| tryptophan--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 365

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 81/252 (32%), Gaps = 36/252 (14%)

Query: 6   SDFLSI------LSERGFIHQISNPRELDILCSQGVVTAYIG-YDLTASSLHAGHLTQLM 58
           SD +        L +RG I    +  +++ L ++    A +G    +   +H GH   + 
Sbjct: 28  SDLIDDVENPHRLMKRGVIFGHRDFDKVNNLINKKEDFAVVGGMMPSGQ-MHIGHKMVVD 86

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L W Q  G     L+    S          +R M   +     +       +++I  G 
Sbjct: 87  QLKWYQDKGAMLSILIADLESY--------AARDMSFEKARDIAVN---EYLTNYIALGL 135

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +   +N      +    DL  +     + N +      ++     QS +       +
Sbjct: 136 DLEE-DNVNVYLQSKNDTLRDLAFKASKKTNFNEL------KAIYGFTQSTNIAHIQAPL 188

Query: 179 LQAYDFV-----ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLL 229
           +Q  D +     E        + +G  DQ  +I    D+  +L          +     L
Sbjct: 189 VQVADILLPQLEEFGGPKRVVVPVG-VDQDPHIRLTRDIAHKLNDEYGFIPPSSTYHRFL 247

Query: 230 TTASGTKMGKTL 241
           T  SG KM  + 
Sbjct: 248 TGLSGDKMSSSK 259


>gi|225376831|ref|ZP_03754052.1| hypothetical protein ROSEINA2194_02473 [Roseburia inulinivorans DSM
           16841]
 gi|225211327|gb|EEG93681.1| hypothetical protein ROSEINA2194_02473 [Roseburia inulinivorans DSM
           16841]
          Length = 365

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 86/323 (26%), Gaps = 25/323 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRD 88
           ++       G   T   LH GH    +     LQ +G   K   ++    ++        
Sbjct: 3   NKKPKIILTGDRPTGK-LHVGHYVGSLKRRVELQNSGEFDKIFIMIADAQAL-------- 53

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            +       +I++NI ++  +    +     K++  + ++   L  + +  +     S  
Sbjct: 54  -TDNADNPAKIRDNIMEV-ALDYLSVGLDPAKSNIFIQSHVAELTELTFYYMNLVTVSRL 111

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
             N  +  E      +    + F  FNY I QA D               G DQ   +  
Sbjct: 112 QRNPTVKAEIQMRNFETSIPMGF--FNYPISQAADITAFK----ATTVPVGEDQLPMLEQ 165

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
             ++  +     ++  T   L               +                  + +++
Sbjct: 166 TKEIVHKFNA--VYGET---LVDPEILLPSNKACLRLPGIDGKAKMSKSLGNCIYLSESE 220

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
                K ++     +  R+      E N     +              E A    ++   
Sbjct: 221 ADVKKKVMSMFTDPDHIRIEDPGKLEGNTVFTYLDAFSNEGHFAEYLPEYANLDELKDHY 280

Query: 329 MSIHSQHMPTISISKDEVSRGMG 351
                  +       + +   + 
Sbjct: 281 KRGGLGDVKVKKFLNNVLQEELS 303


>gi|60683236|ref|YP_213380.1| putative ribosomal large subunit pseudouridine synthase
           [Bacteroides fragilis NCTC 9343]
 gi|60494670|emb|CAH09471.1| putative ribosomal large subunit pseudouridine synthase
           [Bacteroides fragilis NCTC 9343]
          Length = 466

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 1/109 (0%)

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
                 +  +           +     +          + +  + L   +  AG   S  
Sbjct: 188 NNDNRSQGFSRPIRRTGDYDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANAGVC-SRR 246

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EA   + +  + +N  +++    +IK  D     +  +S  +K +++ +
Sbjct: 247 EADEFITAGVVSVNGEVVTELGTKIKRADVVKFHDETVSIERKVYVLLN 295


>gi|53715301|ref|YP_101293.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis YCH46]
 gi|253567192|ref|ZP_04844642.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_2_5]
 gi|265767788|ref|ZP_06095320.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_16]
 gi|52218166|dbj|BAD50759.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis YCH46]
 gi|251944023|gb|EES84542.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_2_5]
 gi|263252460|gb|EEZ23988.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_16]
 gi|301164755|emb|CBW24314.1| putative ribosomal large subunit pseudouridine synthase
           [Bacteroides fragilis 638R]
          Length = 466

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 1/109 (0%)

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
                 +  +           +     +          + +  + L   +  AG   S  
Sbjct: 188 NNDNRSQGFSRPIRRTGDYDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANAGVC-SRR 246

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EA   + +  + +N  +++    +IK  D     +  +S  +K +++ +
Sbjct: 247 EADEFITAGVVSVNGEVVTELGTKIKRADVVKFHDETVSIERKVYVLLN 295


>gi|327188063|gb|EGE55290.1| hemolysin A [Rhizobium etli CNPAF512]
          Length = 261

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                L  L+V  G   S + AR  ++   ++I   +++     I 
Sbjct: 17  QNSQRLDQLLVSRGLFASRSRARDAVQRGTVRIGGQVVTKAGALIS 62


>gi|218513418|ref|ZP_03510258.1| hemolysin A [Rhizobium etli 8C-3]
          Length = 211

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                L  L+V  G   S + AR  ++   ++I   +++     I 
Sbjct: 17  QNSQRLDQLLVSRGLFASRSRARDAVQRGTVRIGGQVVTKAGALIS 62


>gi|125973211|ref|YP_001037121.1| ribosomal large subunit pseudouridine synthase B [Clostridium
           thermocellum ATCC 27405]
 gi|256003686|ref|ZP_05428674.1| pseudouridine synthase [Clostridium thermocellum DSM 2360]
 gi|281417410|ref|ZP_06248430.1| pseudouridine synthase [Clostridium thermocellum JW20]
 gi|125713436|gb|ABN51928.1| ribosomal large subunit pseudouridine synthase B [Clostridium
           thermocellum ATCC 27405]
 gi|255992247|gb|EEU02341.1| pseudouridine synthase [Clostridium thermocellum DSM 2360]
 gi|281408812|gb|EFB39070.1| pseudouridine synthase [Clostridium thermocellum JW20]
 gi|316940559|gb|ADU74593.1| pseudouridine synthase [Clostridium thermocellum DSM 1313]
          Length = 239

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           + M L   + + G   S  +A   +    +K+N   ++    ++   D        +   
Sbjct: 2   KEMRLQKYLAECG-VASRRKAEELISQGRVKVNGETVTQMGKKVSQNDVVEVDGKLVKME 60

Query: 408 KKNHII 413
           K+   I
Sbjct: 61  KRKVYI 66


>gi|116492060|ref|YP_803795.1| tryptophanyl-tRNA synthetase II [Pediococcus pentosaceus ATCC
           25745]
 gi|116102210|gb|ABJ67353.1| tryptophanyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 342

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 95/340 (27%), Gaps = 48/340 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG ++   ++    ++       D +R   + +    
Sbjct: 13  PTGK-LHIGHYVGSLKNRVQLQNTGDYETFIMIADMQAL------TDNARDPEKIRNSLI 65

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 66  QVALDY----LAVGIDPAKSTIFVQSQIPALSELTQHYMNLVSVARLERNPTVKTEIKQK 121

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID--------LG 213
              +     F  F Y + QA D               G DQ   +    +          
Sbjct: 122 AFGQSIPAGF--FTYPVSQAADITAFK----ADTVPVGDDQEPMLEQTREIVRSFNNIYQ 175

Query: 214 ERLKTPKLFALTSPLL----TTASGTKMGKTLSGAIW-------LNKEMTSPYNFWQYWR 262
           + +            +          KM K+L  AI+       + K++ S Y   Q+ R
Sbjct: 176 KEVLVEPEGYFPPKGMGRIPGLDGNAKMSKSLGNAIYLADDEETIQKKVMSMYTDPQHIR 235

Query: 263 -----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK-----KIIATEITTMVHG 312
                +I+   V ++            +   + Q   + + K       +       +  
Sbjct: 236 VEDPGHIEGNTVFTYLDIFDPDKQKVQELKDQYQAGGLGDVKIKRYLNEVLQNELRPIRE 295

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           R E  +A   A+         +       +  EV   +G+
Sbjct: 296 RRERYEADIDAVYQILKDGSDKANAVAEQTLKEVRDAIGI 335


>gi|322695971|gb|EFY87770.1| tryptophanyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 489

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           LD          Y G   ++ S+H GH      + WLQ+T   P+ +M
Sbjct: 96  LDRYEKNEPFFLYTGRGPSSDSMHIGHTQVFDFVKWLQETLDVPLIVM 143


>gi|315051574|ref|XP_003175161.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340476|gb|EFQ99678.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 396

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T    H G+   L+      + G + I       + +                ++Q   
Sbjct: 47  PTGKP-HIGYFIPLIKFADFIRAGGEVIVEYIDVYAFL--------VNYKFPWDQVQHRA 97

Query: 104 EKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              + I ++ +K  G   +   M+ + ++  + K+     ++ +  S           + 
Sbjct: 98  TYYRSIITAALKAIGVPSSKVSMVQSSSFQGTHKFCLDFWKLCALCSQQDSRD-----TG 152

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
            +   S         +LQ      L    D  +Q GG DQ G    G     +L   K  
Sbjct: 153 AEVGASTMLSPMLTPLLQELSEEHL----DVDVQFGGKDQRGIFNLGEQFLPQLGYAKRV 208

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLN 248
            L + +L + +G KM  +      + 
Sbjct: 209 HLLNEMLPSLTGGKMSSSHPAHTKIM 234


>gi|317056623|ref|YP_004105090.1| hemolysin A [Ruminococcus albus 7]
 gi|315448892|gb|ADU22456.1| hemolysin A [Ruminococcus albus 7]
          Length = 263

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +   A S   A+  +KS  ++IN  + +    ++   D   
Sbjct: 7   LTEKALAKSRERAKSMIKSGCVRINGKVCTKPAAEVGDSDLIE 49


>gi|254585373|ref|XP_002498254.1| ZYRO0G05918p [Zygosaccharomyces rouxii]
 gi|238941148|emb|CAR29321.1| ZYRO0G05918p [Zygosaccharomyces rouxii]
          Length = 479

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 14/117 (11%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    EK           S+        S+   +      LL     
Sbjct: 44  QKWTAKQETRAYHGEHLTEKRWQFFFNPKLDSVAQLD---ASLKGGKEEETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
                   + +A FA+S  +AR+ +    + +N   I++    +K  D       K+
Sbjct: 101 LEKRLDFAVFRAMFASSVRQARQFILQGNVFVNGIKIAHPNYTLKPGDVFRVRPSKV 157


>gi|158424014|ref|YP_001525306.1| pseudouridine synthase [Azorhizobium caulinodans ORS 571]
 gi|158330903|dbj|BAF88388.1| pseudouridine synthase [Azorhizobium caulinodans ORS 571]
          Length = 717

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +          +  +I +AG   S  E    + +  + +N  ++++    +  +D
Sbjct: 20  ELPAAAPKEAERIAKVIARAGL-GSRREIEEWITAGRVSVNGEVLASPAFTVTAED 74


>gi|306842278|ref|ZP_07474940.1| hemolysin A [Brucella sp. BO2]
 gi|306287586|gb|EFM59037.1| hemolysin A [Brucella sp. BO2]
          Length = 253

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V+ GF  + + AR  ++   +K++   I+     +   
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVARD 54


>gi|306845066|ref|ZP_07477646.1| hemolysin A [Brucella sp. BO1]
 gi|306274481|gb|EFM56276.1| hemolysin A [Brucella sp. BO1]
          Length = 253

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V+ GF  + + AR  ++   +K++   I+     +   
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVARD 54


>gi|297620435|ref|YP_003708572.1| Tryptophanyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297375736|gb|ADI37566.1| Tryptophanyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 348

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 66/243 (27%), Gaps = 31/243 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                  G   T   LH GH    +      +  +    ++    ++             
Sbjct: 3   EKKRILTGDRPTGK-LHLGHYVGSLKNRVALQDKYDCYFIIADLHTL------------- 48

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
               E +  +E    I    + Y     D           +     +        S NR+
Sbjct: 49  TTKPEKEHIMEMRGNIREMVLDYLACGIDPSKSTIYLQSATSAVYQMNLYFEMMISFNRL 108

Query: 154 LS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                  E  R+     +S+ F    Y +LQ  D +         L   G D   +I   
Sbjct: 109 TGLPSLKEMARNAHIDAESIPFGLIGYPVLQTADILMPR----AHLVPVGKDNEAHIELS 164

Query: 210 IDLGERL--KTPKLF-------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
             +  +      ++F       +    L+ T    KM K+   AI+L+ +  S     + 
Sbjct: 165 RGIARKFNQYYGEVFPLPEVLLSDVPTLIGTDGKGKMSKSAGNAIFLSDDPKSVEKKVKG 224

Query: 261 WRN 263
              
Sbjct: 225 MFT 227


>gi|225352189|ref|ZP_03743212.1| hypothetical protein BIFPSEUDO_03805 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157436|gb|EEG70775.1| hypothetical protein BIFPSEUDO_03805 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 253

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 19/43 (44%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +++ G   S ++A+R +    + +N   ++    ++   D  
Sbjct: 15  ALLERGLTDSRSKAQRLIADGKVSVNGVTVTKASAKVGGDDVI 57


>gi|306834898|ref|ZP_07467955.1| S4 domain protein [Corynebacterium accolens ATCC 49726]
 gi|304569197|gb|EFM44705.1| S4 domain protein [Corynebacterium accolens ATCC 49726]
          Length = 93

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 19/55 (34%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +        + L   I  A    +  EA+  +   A+ +N    +     +++ D
Sbjct: 2   LEVAISGESIKLGQFIKLASLVGTGGEAKELIAEGAVTVNGETETRRGATLQIGD 56


>gi|227502334|ref|ZP_03932383.1| S4 domain protein [Corynebacterium accolens ATCC 49725]
 gi|227076888|gb|EEI14851.1| S4 domain protein [Corynebacterium accolens ATCC 49725]
          Length = 94

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 19/55 (34%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +        + L   I  A    +  EA+  +   A+ +N    +     +++ D
Sbjct: 2   LEVAISGESIKLGQFIKLASLVGTGGEAKELIAEGAVTVNGETETRRGATLQIGD 56


>gi|322707045|gb|EFY98624.1| tryptophanyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 491

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           LD          Y G   ++ S+H GH      + WLQ+T   P+ +M
Sbjct: 99  LDRYEKNEPFFLYTGRGPSSDSMHIGHTQVFDFVKWLQETLDVPLIVM 146


>gi|322372156|ref|ZP_08046697.1| 30S ribosomal protein S4e [Haladaptatus paucihalophilus DX253]
 gi|320548165|gb|EFW89838.1| 30S ribosomal protein S4e [Haladaptatus paucihalophilus DX253]
          Length = 233

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G+ LL ++    G+A S  EAR  L  +A+ +N   +S+E+  I + D  
Sbjct: 35  DGVPLLIIMRDVLGYAASKKEARYALNQDAVLVNGQSVSDEQRPIGMFDIL 85


>gi|255711504|ref|XP_002552035.1| KLTH0B05698p [Lachancea thermotolerans]
 gi|238933413|emb|CAR21597.1| KLTH0B05698p [Lachancea thermotolerans]
          Length = 480

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 16/125 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    E            S+        S+   E+ +   LL     
Sbjct: 44  QKWTAKQETRAYHGEHMTEGRWQTTFTPKLDSVAQLD---ASLKGGEIDQTPILLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSF 406
                   + +A FA+S  +AR+ +    + +N   I+     +K  D F+      L  
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVFVNGIKITQPGYPLKAGDVFNVKPEKVLQA 160

Query: 407 -GKKN 410
            G K 
Sbjct: 161 LGAKK 165


>gi|226323342|ref|ZP_03798860.1| hypothetical protein COPCOM_01116 [Coprococcus comes ATCC 27758]
 gi|225208026|gb|EEG90380.1| hypothetical protein COPCOM_01116 [Coprococcus comes ATCC 27758]
          Length = 361

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 71/236 (30%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNSGEYDKIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYLSCGLDPEKSTIFIQSQVPELTELSFYYMNLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--T 218
              +    + F  F Y I QA D               G DQ   I    ++  +     
Sbjct: 120 RNFEASIPVGF--FTYPISQAADITAFK----ATTVPVGEDQLPMIEQCREIVHKFNSVY 173

Query: 219 PKLFALTSPLLT----------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            +   +   L+           T    KM K+L   I+L+    S     Q    +
Sbjct: 174 GEALVMPKALIPENESCCRLPGTDGKAKMSKSLGNCIYLS---DSEEEVRQKIMGM 226


>gi|294012129|ref|YP_003545589.1| ribosomal large subunit pseudouridine synthase B [Sphingobium
           japonicum UT26S]
 gi|292675459|dbj|BAI96977.1| ribosomal large subunit pseudouridine synthase B [Sphingobium
           japonicum UT26S]
          Length = 304

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +    +  L+ +AG   S  E  R ++   I +N   +S     + 
Sbjct: 63  NEPQRIAKLLARAG-VASRREVERMIEEGRITLNGEAVSTPATLLS 107


>gi|332796660|ref|YP_004458160.1| tryptophanyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694395|gb|AEE93862.1| tryptophanyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 380

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 84/311 (27%), Gaps = 36/311 (11%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQK 65
           L ++  R       +    L           Y G    A SL  H GHL   +   WLQ+
Sbjct: 45  LHVMLRRDVFFSHRDLDLVLKDYEEGKGFFLYTGR---APSLGMHIGHLVPFIFTRWLQE 101

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
              K    +      I D    DE         +++  +         I  G       +
Sbjct: 102 K-FKVNLYI-----EITD----DEKFMRNPELTLEQTRQFAYDNILDIIAVGFDPDRTFI 151

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             +  ++ ++  +           + + L+F  VR+    E S +     Y  LQ    +
Sbjct: 152 FQDTEYIRNMYPLAT--------KIAKKLTFSEVRATFGLENSSNIGIIFYPALQIAPTM 203

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
              K       +     W       +     K  ++ +   P LT   G         AI
Sbjct: 204 FEKKRCLIPAGIDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSSSIPESAI 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAK------------RLTTLPMSEIDRMAKLQGK 293
           +L  +  +       +        +   +            +   +   E D   K   +
Sbjct: 264 YLTDDPKTVERKIMKYAFSGGQPTIELHRKYGGNPEIDVSFQWLYMFFEEDDNKIKKIEE 323

Query: 294 EINEAKKIIAT 304
           +    K +   
Sbjct: 324 DYRSGKMLTGE 334


>gi|291295322|ref|YP_003506720.1| tryptophanyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470281|gb|ADD27700.1| tryptophanyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 346

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 57/198 (28%), Gaps = 33/198 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPS-----FRDE 89
             + G+  T   LH G+    M+  +   +K G   I  +    +    P+      +D 
Sbjct: 3   RVFSGFQPTGD-LHIGNYLGAMVNYIALGEKLGQDAIYCIVDYHA----PTNPVAYDKDL 57

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R+      +                    ++         W+             +   
Sbjct: 58  LRQRTFEAALVNIAAG----LDPNKVILFVQSHVPEHTELAWI-----------FTTQTP 102

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
              +      + +  + +S+      Y +L A D + L K     +   G DQ  ++   
Sbjct: 103 YGDLTRMTQFKDKAAKLESVPAGLLMYPVLMAADIL-LYKADTVPV---GDDQTQHLELT 158

Query: 210 IDLGERLKTPKLFALTSP 227
            ++  R    + +  T P
Sbjct: 159 REIARRWN--QTYGETFP 174


>gi|157164791|ref|YP_001466227.1| tryptophanyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112801539|gb|EAT98883.1| tryptophanyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 321

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 72/228 (31%), Gaps = 32/228 (14%)

Query: 36  VTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +  +Q+  ++    +    ++              
Sbjct: 1   MRVLTGLQPSGK-LHLGNYFASIKQMVDMQEQ-NEMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
              E +   +       +F+  G     ++           + ++L   +     +  + 
Sbjct: 46  SLSEAKALKQNTFDAACAFLALGIDPNKSIFWVQSD---VKEVLELYWVLSQHTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S     F+Y +L A D +     Y+ ++   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSSHHGLFSYPVLMAADIL----LYNAQVVPVGKDQIQHVEIARDIAI 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTS 253
           +         T P          +   +G KM K+    I +  +  +
Sbjct: 159 KFNNEHGEIFTLPEAKIDENVATVPGTNGEKMSKSYGNTIDIFADAKT 206


>gi|152973219|ref|YP_001338365.1| tryptophanyl-tRNA synthetase II [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150958068|gb|ABR80098.1| putative tryptophanyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 335

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               T   G   T   LH GH    +      +  H+   L+     +         +  
Sbjct: 2   NHPQTILTGDRPTGQ-LHLGHYVGSLRQRVALQHNHQQFILIADLQGL---------TDN 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               Q+I  +I ++       +   T  T   + +    L  +  + +     +    N 
Sbjct: 52  GSNPQKISHHILEVMA-DYLAVGIDTRLTTICLQSALPALAELSALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + F    Y I QA D           L   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGF--LAYPISQAADITAFK----AELVPVGDDQLPMIEQTNEI 164

Query: 213 GERLK 217
             ++ 
Sbjct: 165 VHKMN 169


>gi|253578469|ref|ZP_04855741.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850787|gb|EES78745.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 353

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 60/197 (30%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++I+
Sbjct: 11  PTGR-LHVGHYVGSLSERVRLQNSGLYDEIYIMIADAQAL---------TDNAEHPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     +    N  +  E   
Sbjct: 61  QNILQV-ALDYLACGIDPEKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  +  T  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFR----ATTVPVGEDQLPMLEQCKEIVHKFNTVY 173

Query: 221 LFALTSPLLTTASGTKM 237
              LT P +   S    
Sbjct: 174 GETLTEPEIILPSNKAC 190


>gi|70921159|ref|XP_733954.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506229|emb|CAH83422.1| hypothetical protein PC300495.00.0 [Plasmodium chabaudi chabaudi]
          Length = 210

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query: 26 ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           L+          Y G   ++ S+H GHL       +LQ   + P+ +
Sbjct: 51 LLNYYEKNKSFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLII 98


>gi|154505113|ref|ZP_02041851.1| hypothetical protein RUMGNA_02626 [Ruminococcus gnavus ATCC 29149]
 gi|153794592|gb|EDN77012.1| hypothetical protein RUMGNA_02626 [Ruminococcus gnavus ATCC 29149]
          Length = 362

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 71/225 (31%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNTGDFDEMFVMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K    + +    LC + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYLACGLDPQKCTLFIQSQIPQLCELSFYYMNLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D           +   G DQ   +    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FTYPISQAADITAFK----ANVVPVGEDQLPMLEQTKEIVRKFNSVY 173

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTS 253
              L  P +             T    KM K+L   I+L++E   
Sbjct: 174 GDTLVEPEILLPENQACLRLPGTDGKAKMSKSLGNCIYLSEEPDE 218


>gi|319651915|ref|ZP_08006038.1| pseudouridine synthase [Bacillus sp. 2_A_57_CT2]
 gi|317396407|gb|EFV77122.1| pseudouridine synthase [Bacillus sp. 2_A_57_CT2]
          Length = 239

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 17/31 (54%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  + ++ LK  A+ +N+  + + K Q+  +
Sbjct: 14  SRKDVKKLLKDGAVTVNDEKVKDPKHQVDPE 44


>gi|154251100|ref|YP_001411924.1| RNA-binding S4 domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155050|gb|ABS62267.1| RNA-binding S4 domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 327

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           S  +   G  +  +I +AG   S  EA + ++   + ++  ++ +  L +          
Sbjct: 7   SSPDTPAGDRIAKVIARAGIC-SRREAEKLIEEGRVTVDGKVLKSPALNVT------GRE 59

Query: 402 IKLSFGK 408
             +  GK
Sbjct: 60  TIIVDGK 66


>gi|313202763|ref|YP_004041420.1| RNA-binding s4 domain protein [Paludibacter propionicigenes WB4]
 gi|312442079|gb|ADQ78435.1| RNA-binding S4 domain protein [Paludibacter propionicigenes WB4]
          Length = 514

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 3/135 (2%)

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
            +D     ++ +        E         K     K                  K    
Sbjct: 190 RLDSNGEKTYGRSYNRPSEDEPRTGKLSFKKPGEGQKSEFIETRYDNKKDGVTFRKPYRK 249

Query: 323 AMECFDMSIHSQHMPTISISK--DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           A + +D +    +   +   K   ++++ + L   +  AG   S  EA  ++++  I +N
Sbjct: 250 ADDSYDPNSKYSNKKQLEFKKTVVDLTKPIRLNKFLANAGIC-SRREADEYIQAGVISVN 308

Query: 381 NSIISNEKLQIKLQD 395
             I++   +++ L D
Sbjct: 309 GEIVTEMGVKVLLTD 323


>gi|70951642|ref|XP_745045.1| tryptophan--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56525240|emb|CAH81224.1| tryptophan--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 367

 Score = 42.0 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            L+          Y G   ++ S+H GHL       +LQ   + P+ +
Sbjct: 306 LLNYYEKNKSFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLII 353


>gi|119025929|ref|YP_909774.1| hemolysin-like protein [Bifidobacterium adolescentis ATCC 15703]
 gi|118765513|dbj|BAF39692.1| hemolysin-like protein with S4 domain [Bifidobacterium adolescentis
           ATCC 15703]
          Length = 251

 Score = 42.0 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            +V+ G   S ++A+R ++S  +++N ++ S   L++   D   
Sbjct: 14  ALVERGVTDSRSKAQRLIESGKVRVNGTVASKASLKVTAADTLD 57


>gi|315426331|dbj|BAJ47972.1| tryptophanyl-tRNA synthetase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 362

 Score = 42.0 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 77/282 (27%), Gaps = 20/282 (7%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPS 85
           LD   S      Y G   +   +H GH+       WLQ + G      M        D  
Sbjct: 68  LDDHESGRGFYLYTGRGPSGP-MHVGHIIPFFFTKWLQERFGANVYIQMTD------DEK 120

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
           F +E+R +        +++ +  I +             +  N  ++         R   
Sbjct: 121 FLEETRGLTLEDTAYWSLDNMVNIAAVGFDPD----KTFIFRNTEFM--------ARMYR 168

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
               V R ++F  VR+     +  +     +  +Q    +   +       +     W  
Sbjct: 169 PVLKVARKINFSWVRAVFGFNEQTNIGMVFFPAIQIVPTMFEKRRCLIPAAIDQDPYWRI 228

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
                +     K   + +     LT  +G         A++L  +  +         +  
Sbjct: 229 QRDIAESLGFYKAAAIHSRFLMPLTGPTGKMSASQPEAAVFLTDDDKTVRKKIWQAFSGG 288

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
              V    K      +    +      +E +   + +  E  
Sbjct: 289 QPTVELHRKLGGNPDIDVAFQWLYYFFEEDDRKVEQLREEYV 330


>gi|195379256|ref|XP_002048396.1| GJ11372 [Drosophila virilis]
 gi|194155554|gb|EDW70738.1| GJ11372 [Drosophila virilis]
          Length = 691

 Score = 42.0 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 34/242 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   T  SLH G+    +     LQK+       +    SI             
Sbjct: 51  PRKIFSGIQPTG-SLHLGNYLGAVRKWTQLQKSRENVTICIVDMHSIT----------MP 99

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                ++ENI  +    ++ +  G     + +      +   +   +L  + +   + ++
Sbjct: 100 HNPPLLRENIFTM---AATLLACGVDPAQSTLFVQSAVMEHSELNWILNSLTTMPRLAQL 156

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + + +  + +    F Y +LQA D   L K     +   G DQ  +I     L 
Sbjct: 157 PQ---FKEKSRMVRDVPLGLFVYPVLQAADI-MLYKATHVPV---GIDQLQHIQLAQHLA 209

Query: 214 ERLK--TPKLFALTSPLLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFWQYW 261
                   ++F + +P++    G           KM K+            SP    +  
Sbjct: 210 RNFNTRYGEMFPVCTPMIEENDGSRILSLREPSKKMSKSDQNPKATINLSDSPDVIKEKI 269

Query: 262 RN 263
           + 
Sbjct: 270 KK 271


>gi|299783031|gb|ADJ41029.1| Ribosomal protein S4e [Lactobacillus fermentum CECT 5716]
          Length = 261

 Score = 42.0 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 66/232 (28%), Gaps = 16/232 (6%)

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  D++  A +    +     +     I  +    + +    F    P      G     
Sbjct: 20  QVNDWLTTAGDQYRPVLTAFLNPRQRYIMRVIANRQDEVKVAFKGAYPGAEMQRGLAYPA 79

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEIN 296
                    +      N+ Q +  +    V+           +  D        Q     
Sbjct: 80  YYQPTEDDFELQLLEINYPQKFAELHHRQVMGAVLSTGVERGAFGDIIASDEHWQIIVQR 139

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +    +  ++T++   +   EK            +  +    +  +   +      L  +
Sbjct: 140 QLSDYLIEQVTSIGKAKVRLEKREL-----QGARVPQEDWQELVTTVASLR-----LDAV 189

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLS 405
           V A F  S N A++ ++   +++N   I     ++  +D       G IK+ 
Sbjct: 190 VAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDLISVRHGGRIKVQ 241


>gi|238021224|ref|ZP_04601650.1| hypothetical protein GCWU000324_01122 [Kingella oralis ATCC 51147]
 gi|237868204|gb|EEP69210.1| hypothetical protein GCWU000324_01122 [Kingella oralis ATCC 51147]
          Length = 78

 Score = 42.0 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNI 402
           E    + L  L+  AG A S  +A+  + +  ++ N +  + +  +I+  +        +
Sbjct: 8   EDQDHIALCDLLKLAGLAESGGQAKALIAAGQVQRNGATETRKTAKIRAGEIITLHGNEL 67

Query: 403 KLSFG 407
           ++  G
Sbjct: 68  EIQAG 72


>gi|94309385|ref|YP_582595.1| tryptophanyl-tRNA synthetase II [Cupriavidus metallidurans CH34]
 gi|93353237|gb|ABF07326.1| Tryptophanyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 342

 Score = 42.0 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 27/201 (13%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGT 78
             +NP +  ++ +            T   LH GH    +     LQ+T HK   L+    
Sbjct: 3   DQTNPDKRPVILTGDR--------PTGP-LHLGHFVGSLKSRVTLQET-HKQYVLLADTQ 52

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++         +       +++ N+ ++  +    +     KT   + ++   L  +  +
Sbjct: 53  AM---------TDNAHDPDKVRRNVLEV-ALDYLAVGIDPAKTTISVQSHLPALAELTLM 102

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            L     S    N  +  E       R+    F    Y   QA D       +   L   
Sbjct: 103 YLNFVTVSRLERNPTIKEEIQARGFGRDIPAGF--LCYPASQAADIT----GFKAVLVPV 156

Query: 199 GSDQWGNIICGIDLGERLKTP 219
           G DQ   I    ++  R+   
Sbjct: 157 GEDQAPLIEQTNEIVRRVNNQ 177


>gi|300121522|emb|CBK22041.2| Pseudouridine synthase [Blastocystis hominis]
          Length = 271

 Score = 42.0 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +  +  +  M +   I ++G   S  EA R ++   + +N  +I++  + +  QD   
Sbjct: 2   LPPNAAALSMRIAKRIARSGVC-SRREAERWIEMGRVTLNGKVITSPAINVTQQDIIH 58


>gi|224436535|ref|ZP_03657544.1| hypothetical protein HcinC1_01225 [Helicobacter cinaedi CCUG 18818]
          Length = 240

 Score = 42.0 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSF 406
           L + VK+   +S  +A+  ++S  +K+N +++      ++  D     + ++ LS 
Sbjct: 3   LDIYVKS-LCSSRTKAKEAIESGCVKVNGAVVKKGSFLLEKDDEVGVDSKDLLLSR 57


>gi|332878095|ref|ZP_08445825.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684057|gb|EGJ56924.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 364

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 98/352 (27%), Gaps = 42/352 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K         ++         +  +   ++++
Sbjct: 13  PTGK-LHIGHYVGSLRRRVELQNSGQFDKIFIFEADAQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGIDPAKSTIFIQSQIPELCELSFYFMDLVSVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  R     
Sbjct: 122 RNFEASIPVGF--FTYPISQAADITAFK----ATTVPVGEDQEPMLEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
              L  P +             T    KM K+L   I+L+          +      +  
Sbjct: 176 GDTLVEPNILLPENAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVEKKIRTMYTDPNHL 235

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            VS   ++    +                       E     + R               
Sbjct: 236 KVSDPGQVEGNTVFTYLDAFSRPEHFGRYLPDYADLEELKAHYRRGGLGDVKVKKFL--- 292

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST-------NEARRHLK 373
            ++  + +  I   + E  + +  +  ++K G   +        +E R+ +K
Sbjct: 293 AAVMQEELEPIRQRRKEFEQDIPAVYEMLKKGCEAARAVAADTLSEVRKAMK 344


>gi|254423526|ref|ZP_05037244.1| photosystem II S4 domain protein [Synechococcus sp. PCC 7335]
 gi|196191015|gb|EDX85979.1| photosystem II S4 domain protein [Synechococcus sp. PCC 7335]
          Length = 259

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 8/127 (6%)

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             A+ ++  E+   +       ++ +      +MS      P        V   M L   
Sbjct: 131 RGAQAVVVPELVEFLTTSLTQVRSVSVKTRPIEMSELRVREPKKK-EMTTVEASMRL-DA 188

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG-----KK 409
           +  AGF  S ++    +    +++N   ++     ++  D  +  G  +L  G     KK
Sbjct: 189 LASAGFGMSRSKMADMITGGDVRVNWKPVTQASQTLQPGDLVAIRGKGRLEVGEMAVTKK 248

Query: 410 NHIICHL 416
                 L
Sbjct: 249 QRYRVQL 255


>gi|327312548|ref|YP_004327985.1| pseudouridylate synthase [Prevotella denticola F0289]
 gi|326945115|gb|AEA21000.1| pseudouridylate synthase [Prevotella denticola F0289]
          Length = 507

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 1/96 (1%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A    +     +          + +  + L   +  AG   S  EA   + S A+ +
Sbjct: 242 QRTADYDPNAKYSLKKRIEYKEENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTV 300

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           N  ++     ++   D        +S  KK +++ +
Sbjct: 301 NGEVVKELGSKVLRSDVVLFQEKPVSLEKKVYVLLN 336


>gi|326472324|gb|EGD96333.1| 30S ribosomal subunit S4 [Trichophyton tonsurans CBS 112818]
          Length = 483

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 40/118 (33%), Gaps = 5/118 (4%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI---HSQHMP 337
             E  R ++ +       + ++  +   +         A   +             Q  P
Sbjct: 54  HGEQVRESQWERMFSRRLRAVVPMDPFDLARNDGSKNAAGRGSGMDKGGREDGRQVQDTP 113

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + ++   + R + +   I +A FA+ST +AR+ +    + +N   +      +   D
Sbjct: 114 YMLMTFAPLERRLDV--AIFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYLLNPGD 169


>gi|325851841|ref|ZP_08171006.1| pseudouridylate synthase [Prevotella denticola CRIS 18C-A]
 gi|325484683|gb|EGC87596.1| pseudouridylate synthase [Prevotella denticola CRIS 18C-A]
          Length = 507

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 1/96 (1%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A    +     +          + +  + L   +  AG   S  EA   + S A+ +
Sbjct: 242 QRTADYDPNAKYSLKKRIEYKEENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTV 300

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           N  ++     ++   D        +S  KK +++ +
Sbjct: 301 NGEVVKELGSKVLRSDVVLFQEKPVSLEKKVYVLLN 336


>gi|325268750|ref|ZP_08135378.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           multiformis DSM 16608]
 gi|324988918|gb|EGC20873.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           multiformis DSM 16608]
          Length = 509

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 1/96 (1%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A    +     +          + +  + L   +  AG   S  EA   + S A+ +
Sbjct: 244 QRTADYDPNAKYSLKKRIEYKEENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTV 302

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           N  ++     ++   D        +S  KK +++ +
Sbjct: 303 NGEVVKELGSKVLRSDVVLFQEKPVSLEKKVYVLLN 338


>gi|227514818|ref|ZP_03944867.1| ribosomal protein S4e [Lactobacillus fermentum ATCC 14931]
 gi|227086808|gb|EEI22120.1| ribosomal protein S4e [Lactobacillus fermentum ATCC 14931]
          Length = 262

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 66/232 (28%), Gaps = 16/232 (6%)

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  D++  A +    +     +     I  +    + +    F    P      G     
Sbjct: 21  QVNDWLTTAGDQYRPVLTAFLNPRQRYIMRVIANRQDEVKVAFKGAYPGAEMQRGLAYPA 80

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEIN 296
                    +      N+ Q +  +    V+           +  D        Q     
Sbjct: 81  YYQPTEDDFELQLLEINYPQKFAELHHRQVMGAVLSTGVERGAFGDIIASDEHWQIIVQR 140

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +    +  ++T++   +   EK            +  +    +  +   +      L  +
Sbjct: 141 QLSDYLIEQVTSIGKAKVRLEKREL-----QGARVPQEDWQELVTTVASLR-----LDAV 190

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLS 405
           V A F  S N A++ ++   +++N   I     ++  +D       G IK+ 
Sbjct: 191 VAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDLISVRHGGRIKVQ 242


>gi|152979774|ref|YP_001352535.1| tryptophanyl-tRNA synthetase II [Janthinobacterium sp. Marseille]
 gi|151279851|gb|ABR88261.1| tryptophanyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 344

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 71/215 (33%), Gaps = 29/215 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ T HK   L+    ++         +  + R Q + EN
Sbjct: 22  PTGP-LHLGHYIGSLKSRLELQDT-HKQFILLADTQAM---------TDNVGRHQRVTEN 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++  +    +     K+   + +    L  +  + L     S    N  +  E     
Sbjct: 71  VLEV-ALDYLAVGIDPEKSTIFIQSQIPELYELSMVLLNLVTVSRLERNPTIKEEIRLRN 129

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
            +R+    F    Y + QA D           L   G+DQ   I    +L  +       
Sbjct: 130 FERDIPAGF--LTYPVSQAADITAFK----ATLVPVGNDQLPMIEQTNELVRKFNSVVGK 183

Query: 218 -----TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  +L + TS L       KM K+L  +I L
Sbjct: 184 DILVECKELLSATSRLPGIDGKAKMSKSLGNSIAL 218


>gi|290512758|ref|ZP_06552124.1| tryptophanyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289775099|gb|EFD83101.1| tryptophanyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 335

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+     +         +      Q+I  +I
Sbjct: 13  PTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL---------TDNGSNPQKISHHI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  LEVMA-DYLAVGIDPRLTTICLQSALPALAELSALYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           L   G DQ   I    ++  ++ 
Sbjct: 122 ARSLPVGF--LAYPISQAADITAFK----AELVPVGDDQLPMIEQTNEIVHKMN 169


>gi|294495319|ref|YP_003541812.1| RNA-binding S4 domain protein [Methanohalophilus mahii DSM 5219]
 gi|292666318|gb|ADE36167.1| RNA-binding S4 domain protein [Methanohalophilus mahii DSM 5219]
          Length = 218

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS--------TGNIKLS 405
           +++ GF +S   A++ +    +K++ ++I+    ++   +            G  KL 
Sbjct: 7   LIETGFFSSRGRAKKAISEGHVKVDGNVITKSSREVSEFNEIEVDEGLDKPRGYFKLR 64


>gi|108803126|ref|YP_643063.1| tryptophanyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108764369|gb|ABG03251.1| tryptophanyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 330

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 84/315 (26%), Gaps = 37/315 (11%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDES 90
                 + G   +  +LH G+    +  +   +  ++    +    ++    DP    E 
Sbjct: 2   DQRQRVFSGIQPSG-NLHIGNYVGAIKNWVAIQERYENYFCIVDLHALTVPQDPK---EL 57

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           RR +R          +        +       A      TWL +         I  F  +
Sbjct: 58  RRKIREVAAIYLASGLDPQRCVIFRQSHVSAHAE----LTWLLN--------CIARFGEL 105

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +RM  F+  ++R +  +S S   F+Y +L A D +     Y+  L   G DQ  ++    
Sbjct: 106 SRMTQFKD-KARKEGTESASVGLFDYPVLMASDIL----LYNAHLVPVGDDQRQHLELTR 160

Query: 211 DLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            L  R      + F +   ++       M             + +P            + 
Sbjct: 161 TLARRFNNLYGETFVVPEAMILKTGARVMA------------LDAPNEKMSKSSPRPASY 208

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           V       T                   E K  I   +        +             
Sbjct: 209 VAILDDPDTVRRKIRRAVTDSGTEIVAREDKPAITNLLDIYAAITGKTVPELEEQYRGRG 268

Query: 329 MSIHSQHMPTISISK 343
                + +  + +  
Sbjct: 269 YGEFKKDLAEVVVEA 283


>gi|320009846|gb|ADW04696.1| tryptophanyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 352

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 80/241 (33%), Gaps = 34/241 (14%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIG 82
           EL+   ++      +  G   T  +LH GH    +     LQ  G     L+     +  
Sbjct: 18  ELEAQLARDPGRFRVLTGDRPTG-ALHLGHYFGTLHNRVRLQDLGVDVFVLIADYQVL-- 74

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
             + RD + R+          E ++G+   ++  G     A + N+           LL 
Sbjct: 75  --TDRDVAERLN---------EHVEGLLLDYLAIGIDPARATVFNHS---AVPALNQLLL 120

Query: 143 EIGSFFSVNRMLSFESVRSR--LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
              S  SV  +    +V+      R+ ++S L + Y + QA D +         L   G 
Sbjct: 121 PFLSLVSVAELGRNPTVKDEIAHSRQSAVSGLMYTYPVHQAADIL----FCKGNLVPVGQ 176

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSP--------LLTTASGTKMGKTLSGAIWLNKEMT 252
           DQ  ++     +  R           P        LL     TKM K+   AI L  +  
Sbjct: 177 DQLPHLELTRTVARRFNERYGNVFPEPDALLSAAPLLLGTDATKMSKSRGNAIALGADAD 236

Query: 253 S 253
            
Sbjct: 237 E 237


>gi|212690763|ref|ZP_03298891.1| hypothetical protein BACDOR_00250 [Bacteroides dorei DSM 17855]
 gi|212666640|gb|EEB27212.1| hypothetical protein BACDOR_00250 [Bacteroides dorei DSM 17855]
          Length = 243

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 3   DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 61

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 62  SIERKTYILLN 72


>gi|159042497|ref|YP_001541749.1| tryptophanyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157921332|gb|ABW02759.1| tryptophanyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 383

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 8/58 (13%)

Query: 12  LSERGFIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           L  RGF +     R    + ++  +      Y G   +   LH GHL   +L  W   
Sbjct: 57  LIRRGFFYAH---RGFREILNRAKLGESWALYNGRGPSGD-LHVGHLVPWILTKWFVD 110


>gi|29653614|ref|NP_819306.1| 30S ribosomal protein S4 [Coxiella burnetii RSA 493]
 gi|154706831|ref|YP_001425158.1| 30S ribosomal protein S4 [Coxiella burnetii Dugway 5J108-111]
 gi|161831288|ref|YP_001596209.1| 30S ribosomal protein S4 [Coxiella burnetii RSA 331]
 gi|212213226|ref|YP_002304162.1| 30S ribosomal protein S4 [Coxiella burnetii CbuG_Q212]
 gi|41017834|sp|Q83EQ3|RS4_COXBU RecName: Full=30S ribosomal protein S4
 gi|189045376|sp|A9KD07|RS4_COXBN RecName: Full=30S ribosomal protein S4
 gi|189045377|sp|A9NAZ4|RS4_COXBR RecName: Full=30S ribosomal protein S4
 gi|226697830|sp|B6J239|RS4_COXB2 RecName: Full=30S ribosomal protein S4
 gi|29540876|gb|AAO89820.1| SSU ribosomal protein S4P [Coxiella burnetii RSA 493]
 gi|154356117|gb|ABS77579.1| SSU ribosomal protein S4P [Coxiella burnetii Dugway 5J108-111]
 gi|161763155|gb|ABX78797.1| ribosomal protein S4 [Coxiella burnetii RSA 331]
 gi|212011636|gb|ACJ19017.1| SSU ribosomal protein S4P [Coxiella burnetii CbuG_Q212]
          Length = 206

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 8/60 (13%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S G  LL L+           GFA +  EAR+ +   AI +N  +++    Q+K  D   
Sbjct: 85  STGDNLLKLLESRLDNVVYRMGFAATRAEARQLISHKAILVNGEVVNIPSYQVKPGDIIE 144


>gi|167577056|ref|ZP_02369930.1| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis TXDOH]
          Length = 346

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 51/176 (28%), Gaps = 17/176 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  +LH GH    +      +  H+   L+    ++         +       +++ N+
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQQTHRQFILVADTQAL---------TDNAHDPDKVRRNV 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++  +    +     ++   + +    L  +    L     +    N  +  E      
Sbjct: 70  IEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARGF 128

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            R+    F    Y + QA D               G DQ   I    ++  R+   
Sbjct: 129 GRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRRINRQ 178


>gi|161723123|ref|YP_438712.2| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis E264]
 gi|167615223|ref|ZP_02383858.1| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis Bt4]
 gi|257141787|ref|ZP_05590049.1| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis E264]
          Length = 346

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 51/176 (28%), Gaps = 17/176 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  +LH GH    +      +  H+   L+    ++         +       +++ N+
Sbjct: 20  PTG-ALHLGHYIGSLKTRIALQQTHRQFILVADTQAL---------TDNAHDPDKVRRNV 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++  +    +     ++   + +    L  +    L     +    N  +  E      
Sbjct: 70  IEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARGF 128

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            R+    F    Y + QA D               G DQ   I    ++  R+   
Sbjct: 129 GRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRRINRQ 178


>gi|83650193|gb|ABC34257.1| tryptophanyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 374

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 51/176 (28%), Gaps = 17/176 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  +LH GH    +      +  H+   L+    ++         +       +++ N+
Sbjct: 48  PTG-ALHLGHYIGSLKTRIALQQTHRQFILVADTQAL---------TDNAHDPDKVRRNV 97

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++  +    +     ++   + +    L  +    L     +    N  +  E      
Sbjct: 98  IEV-ALDYLAVGIDPRRSTIAVQSGLPALAELTLFYLNFVTVARLERNPTIKDEIHARGF 156

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            R+    F    Y + QA D               G DQ   I    ++  R+   
Sbjct: 157 GRDIPAGF--LCYPVAQAADITAFK----ADTVPVGDDQLPLIEQTNEIVRRINRQ 206


>gi|289581366|ref|YP_003479832.1| tryptophan--tRNA ligase [Natrialba magadii ATCC 43099]
 gi|289530919|gb|ADD05270.1| Tryptophan--tRNA ligase [Natrialba magadii ATCC 43099]
          Length = 570

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R + + L +        G+  T    H GH      + W Q+ G   
Sbjct: 89  LMRRGVIFGQRDYRPVVEALQNDEPAAVLSGFMPTGDP-HIGHKLVFDEIIWHQQQGADA 147

Query: 71  ISLMGG 76
            +L+  
Sbjct: 148 YALIAD 153


>gi|206580076|ref|YP_002240675.1| tryptophanyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|206569134|gb|ACI10910.1| tryptophanyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 335

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+     +         +      Q+I  +I
Sbjct: 13  PTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL---------TDNGSNPQKISHHI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  LEVMA-DYLAVGIDPRLTTICLQSALPALAELSALYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           L   G DQ   I    ++  ++ 
Sbjct: 122 ARSLPVGF--LAYPISQAADITAFK----AELVPVGDDQLPMIEQTNEIVHKMN 169


>gi|260663600|ref|ZP_05864489.1| RNA-binding S4 domain-containing protein [Lactobacillus fermentum
           28-3-CHN]
 gi|260551826|gb|EEX24941.1| RNA-binding S4 domain-containing protein [Lactobacillus fermentum
           28-3-CHN]
          Length = 261

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 65/232 (28%), Gaps = 16/232 (6%)

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  D++  A +    +     +     I  +    + +    F    P      G     
Sbjct: 20  QVNDWLTTAGDQYRPVLTAFLNPRQRYIMRVIANRQDEVKVAFKGAYPGAEMQRGLAYPA 79

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEIN 296
                    +      N+ Q +  +    V+           +  D        Q     
Sbjct: 80  YYQPTEDDFELQLLEINYPQKFAELHHRQVMGAVLSTGVERGAFGDIIASDEHWQIIIQR 139

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +    +  ++T++   +   EK               +    +  +   +      L  +
Sbjct: 140 QLSDYLIEQVTSIGKAKVRLEKREL-----QGARAPQEDWQELVTTVASLR-----LDAV 189

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLS 405
           V A F  S N A++ ++   +++N   I     ++  +D       G IK+ 
Sbjct: 190 VAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDLISVRHGGRIKVQ 241


>gi|262045084|ref|ZP_06018125.1| tryptophan-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037599|gb|EEW38829.1| tryptophan-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 335

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+     +         +      Q+I  +I
Sbjct: 13  PTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL---------TDNGSNPQKISHHI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  LEVMA-DYLAVGIDPRLTTICLQSALPALAELSALYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D           L   G DQ   I    ++  ++ 
Sbjct: 122 ARSLPVGF--LAYPISQAADITAFK----AELVPVGDDQLPMIEQTNEIVHKMN 169


>gi|254712999|ref|ZP_05174810.1| Cell division protein FtsJ [Brucella ceti M644/93/1]
 gi|254716647|ref|ZP_05178458.1| Cell division protein FtsJ [Brucella ceti M13/05/1]
 gi|261218448|ref|ZP_05932729.1| hemolysin A [Brucella ceti M13/05/1]
 gi|261320702|ref|ZP_05959899.1| hemolysin A [Brucella ceti M644/93/1]
 gi|260923537|gb|EEX90105.1| hemolysin A [Brucella ceti M13/05/1]
 gi|261293392|gb|EEX96888.1| hemolysin A [Brucella ceti M644/93/1]
          Length = 240

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            L+V+ GF  + + AR  ++   +K++   I+     +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMV 51


>gi|254693218|ref|ZP_05155046.1| Cell division protein FtsJ [Brucella abortus bv. 3 str. Tulya]
 gi|261213461|ref|ZP_05927742.1| hemolysin A [Brucella abortus bv. 3 str. Tulya]
 gi|260915068|gb|EEX81929.1| hemolysin A [Brucella abortus bv. 3 str. Tulya]
          Length = 253

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            L+V+ GF  + + AR  ++   +K++   I+     +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMV 51


>gi|148559255|ref|YP_001258457.1| hemolysin A [Brucella ovis ATCC 25840]
 gi|148370512|gb|ABQ60491.1| hemolysin A [Brucella ovis ATCC 25840]
          Length = 253

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            L+V+ GF  + + AR  ++   +K++   I+     +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMV 51


>gi|154174444|ref|YP_001407732.1| tryptophanyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112803611|gb|EAU00955.1| tryptophanyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 321

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 86/313 (27%), Gaps = 45/313 (14%)

Query: 36  VTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   QKT  +    +    ++              
Sbjct: 1   MRVLTGLQPSGK-LHLGNYFASIKQMIEAQKTS-EMFMFIANYHAM-------------- 44

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI--KYIDLLREIGSFFSVNR 152
                  N  K     +                +  W+ S   + ++L   +  +  +  
Sbjct: 45  ----TSLNDAKALKQNTLEAAAAFLALGIDPKKSVFWVQSDVKEVLELYWVLSQYTPMGL 100

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +    S + ++ +    S   F+Y +L A D +     Y  ++   G DQ  ++    D+
Sbjct: 101 LERAHSYKDKVAKGIGASHGLFSYPVLMAADIL----LYSAQIVPVGKDQIQHVEIARDI 156

Query: 213 GERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             +        LT P          +    G KM K+    I +       +   +  + 
Sbjct: 157 AIKFNNEHGEILTLPTHRVDENVATVPGTDGAKMSKSYGNTIDI-------FADAKTLKK 209

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA--TEITTMVHGREEAEKAAT 321
              + V +             +     +     + +K +    E     HG  +A     
Sbjct: 210 QISSIVTASEPLEAPKQWQNCNVYNIAKLFLDEDGQKALQARYEKGGEGHGHFKAYLNEL 269

Query: 322 AAMECFDMSIHSQ 334
                 D     +
Sbjct: 270 IWAYFKDAREKFE 282


>gi|17987780|ref|NP_540414.1| hemolysin [Brucella melitensis bv. 1 str. 16M]
 gi|225851973|ref|YP_002732206.1| hemolysin A [Brucella melitensis ATCC 23457]
 gi|256044154|ref|ZP_05447061.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112957|ref|ZP_05453865.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
 gi|256264519|ref|ZP_05467051.1| cell division protein FtsJ [Brucella melitensis bv. 2 str. 63/9]
 gi|260563511|ref|ZP_05833997.1| cell division protein FtsJ [Brucella melitensis bv. 1 str. 16M]
 gi|265990566|ref|ZP_06103123.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994396|ref|ZP_06106953.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
 gi|17983504|gb|AAL52678.1| hemolysin [Brucella melitensis bv. 1 str. 16M]
 gi|225640338|gb|ACO00252.1| hemolysin A [Brucella melitensis ATCC 23457]
 gi|260153527|gb|EEW88619.1| cell division protein FtsJ [Brucella melitensis bv. 1 str. 16M]
 gi|262765509|gb|EEZ11298.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
 gi|263001350|gb|EEZ13925.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094852|gb|EEZ18590.1| cell division protein FtsJ [Brucella melitensis bv. 2 str. 63/9]
 gi|326408469|gb|ADZ65534.1| hemolysin A [Brucella melitensis M28]
 gi|326538186|gb|ADZ86401.1| hemolysin A [Brucella melitensis M5-90]
          Length = 253

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            L+V+ GF  + + AR  ++   +K++   I+     +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMV 51


>gi|23501338|ref|NP_697465.1| hemolysin A [Brucella suis 1330]
 gi|62289422|ref|YP_221215.1| hemolysin A [Brucella abortus bv. 1 str. 9-941]
 gi|82699349|ref|YP_413923.1| cell division protein FtsJ [Brucella melitensis biovar Abortus
           2308]
 gi|161618409|ref|YP_001592296.1| hemolysin A [Brucella canis ATCC 23365]
 gi|189023673|ref|YP_001934441.1| Cell division protein FtsJ [Brucella abortus S19]
 gi|225626945|ref|ZP_03784984.1| hemolysin A [Brucella ceti str. Cudo]
 gi|237814910|ref|ZP_04593908.1| hemolysin A [Brucella abortus str. 2308 A]
 gi|254688735|ref|ZP_05151989.1| Cell division protein FtsJ [Brucella abortus bv. 6 str. 870]
 gi|254696863|ref|ZP_05158691.1| Cell division protein FtsJ [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701242|ref|ZP_05163070.1| Cell division protein FtsJ [Brucella suis bv. 5 str. 513]
 gi|254703789|ref|ZP_05165617.1| Cell division protein FtsJ [Brucella suis bv. 3 str. 686]
 gi|254707834|ref|ZP_05169662.1| Cell division protein FtsJ [Brucella pinnipedialis M163/99/10]
 gi|254709585|ref|ZP_05171396.1| Cell division protein FtsJ [Brucella pinnipedialis B2/94]
 gi|254729768|ref|ZP_05188346.1| Cell division protein FtsJ [Brucella abortus bv. 4 str. 292]
 gi|256031077|ref|ZP_05444691.1| Cell division protein FtsJ [Brucella pinnipedialis M292/94/1]
 gi|256060571|ref|ZP_05450739.1| Cell division protein FtsJ [Brucella neotomae 5K33]
 gi|256159141|ref|ZP_05456962.1| Cell division protein FtsJ [Brucella ceti M490/95/1]
 gi|256254480|ref|ZP_05460016.1| Cell division protein FtsJ [Brucella ceti B1/94]
 gi|256256982|ref|ZP_05462518.1| Cell division protein FtsJ [Brucella abortus bv. 9 str. C68]
 gi|256368892|ref|YP_003106398.1| hemolysin A [Brucella microti CCM 4915]
 gi|260168208|ref|ZP_05755019.1| hemolysin A [Brucella sp. F5/99]
 gi|260545826|ref|ZP_05821567.1| cell division protein FtsJ [Brucella abortus NCTC 8038]
 gi|260566958|ref|ZP_05837428.1| cell division protein FtsJ [Brucella suis bv. 4 str. 40]
 gi|260754214|ref|ZP_05866562.1| hemolysin A [Brucella abortus bv. 6 str. 870]
 gi|260757434|ref|ZP_05869782.1| hemolysin A [Brucella abortus bv. 4 str. 292]
 gi|260761259|ref|ZP_05873602.1| hemolysin A [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883239|ref|ZP_05894853.1| hemolysin A [Brucella abortus bv. 9 str. C68]
 gi|261221653|ref|ZP_05935934.1| hemolysin A [Brucella ceti B1/94]
 gi|261315321|ref|ZP_05954518.1| hemolysin A [Brucella pinnipedialis M163/99/10]
 gi|261317113|ref|ZP_05956310.1| hemolysin A [Brucella pinnipedialis B2/94]
 gi|261324566|ref|ZP_05963763.1| hemolysin A [Brucella neotomae 5K33]
 gi|261751781|ref|ZP_05995490.1| hemolysin A [Brucella suis bv. 5 str. 513]
 gi|261754436|ref|ZP_05998145.1| hemolysin A [Brucella suis bv. 3 str. 686]
 gi|261757669|ref|ZP_06001378.1| cell division protein FtsJ [Brucella sp. F5/99]
 gi|265988150|ref|ZP_06100707.1| hemolysin A [Brucella pinnipedialis M292/94/1]
 gi|265997615|ref|ZP_06110172.1| hemolysin A [Brucella ceti M490/95/1]
 gi|294851815|ref|ZP_06792488.1| hemolysin [Brucella sp. NVSL 07-0026]
 gi|297247835|ref|ZP_06931553.1| hemolysin [Brucella abortus bv. 5 str. B3196]
 gi|23347229|gb|AAN29380.1| hemolysin A [Brucella suis 1330]
 gi|62195554|gb|AAX73854.1| TlyA, hemolysin A [Brucella abortus bv. 1 str. 9-941]
 gi|82615450|emb|CAJ10419.1| Cell division protein FtsJ:RNA-binding S4:Hemolysin A [Brucella
           melitensis biovar Abortus 2308]
 gi|161335220|gb|ABX61525.1| hemolysin A [Brucella canis ATCC 23365]
 gi|189019245|gb|ACD71967.1| Cell division protein FtsJ [Brucella abortus S19]
 gi|225618602|gb|EEH15645.1| hemolysin A [Brucella ceti str. Cudo]
 gi|237789747|gb|EEP63957.1| hemolysin A [Brucella abortus str. 2308 A]
 gi|255999050|gb|ACU47449.1| hemolysin A [Brucella microti CCM 4915]
 gi|260097233|gb|EEW81108.1| cell division protein FtsJ [Brucella abortus NCTC 8038]
 gi|260156476|gb|EEW91556.1| cell division protein FtsJ [Brucella suis bv. 4 str. 40]
 gi|260667752|gb|EEX54692.1| hemolysin A [Brucella abortus bv. 4 str. 292]
 gi|260671691|gb|EEX58512.1| hemolysin A [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674322|gb|EEX61143.1| hemolysin A [Brucella abortus bv. 6 str. 870]
 gi|260872767|gb|EEX79836.1| hemolysin A [Brucella abortus bv. 9 str. C68]
 gi|260920237|gb|EEX86890.1| hemolysin A [Brucella ceti B1/94]
 gi|261296336|gb|EEX99832.1| hemolysin A [Brucella pinnipedialis B2/94]
 gi|261300546|gb|EEY04043.1| hemolysin A [Brucella neotomae 5K33]
 gi|261304347|gb|EEY07844.1| hemolysin A [Brucella pinnipedialis M163/99/10]
 gi|261737653|gb|EEY25649.1| cell division protein FtsJ [Brucella sp. F5/99]
 gi|261741534|gb|EEY29460.1| hemolysin A [Brucella suis bv. 5 str. 513]
 gi|261744189|gb|EEY32115.1| hemolysin A [Brucella suis bv. 3 str. 686]
 gi|262552083|gb|EEZ08073.1| hemolysin A [Brucella ceti M490/95/1]
 gi|264660347|gb|EEZ30608.1| hemolysin A [Brucella pinnipedialis M292/94/1]
 gi|294820404|gb|EFG37403.1| hemolysin [Brucella sp. NVSL 07-0026]
 gi|297175004|gb|EFH34351.1| hemolysin [Brucella abortus bv. 5 str. B3196]
          Length = 253

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            L+V+ GF  + + AR  ++   +K++   I+     +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMV 51


>gi|315426265|dbj|BAJ47907.1| tryptophanyl-tRNA synthetase [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427916|dbj|BAJ49507.1| tryptophanyl-tRNA synthetase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 386

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 77/282 (27%), Gaps = 20/282 (7%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPS 85
           LD   S      Y G   +   +H GH+       WLQ + G      M        D  
Sbjct: 68  LDDHESGRGFYLYTGRGPSGP-MHVGHIIPFFFTKWLQERFGANVYIQMTD------DEK 120

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
           F +E+R +        +++ +  I +             +  N  ++         R   
Sbjct: 121 FLEETRGLTLEDTAYWSLDNMVNIAAVGFDPD----KTFIFRNTEFM--------ARMYR 168

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
               V R ++F  VR+     +  +     +  +Q    +   +       +     W  
Sbjct: 169 PVLKVARKINFSWVRAVFGFNEQTNIGMVFFPAIQIVPTMFEKRRCLIPAAIDQDPYWRI 228

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
                +     K   + +     LT  +G         A++L  +  +         +  
Sbjct: 229 QRDIAESLGFYKAAAIHSRFLMPLTGPTGKMSASQPEAAVFLTDDDKTVRKKIWQAFSGG 288

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
              V    K      +    +      +E +   + +  E  
Sbjct: 289 QPTVELHRKLGGNPDIDVAFQWLYYFFEEDDRKVEQLREEYV 330


>gi|330916756|ref|XP_003297547.1| hypothetical protein PTT_07987 [Pyrenophora teres f. teres 0-1]
 gi|311329706|gb|EFQ94347.1| hypothetical protein PTT_07987 [Pyrenophora teres f. teres 0-1]
          Length = 492

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD+         Y G   ++ ++H GH        WLQ     P+ +
Sbjct: 84  RGLFFSHRDLELILDVYERGDDFLLYTGRGPSSDAMHIGHTIPFEFTKWLQDVFDVPLVI 143

Query: 74  M 74
           M
Sbjct: 144 M 144


>gi|229819835|ref|YP_002881361.1| tryptophanyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565748|gb|ACQ79599.1| tryptophanyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 410

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 68/246 (27%), Gaps = 33/246 (13%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKP 70
           L  R    + +     +I    G      G   T   LH GH    +     LQ+ G + 
Sbjct: 67  LRAR---ARSTQLEA-EIAADAGRFRVLTGDRPTGR-LHLGHYLATLRSRVRLQELGVRT 121

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++     +I D       R  +                   +    G+T     +   
Sbjct: 122 FVVIADYQ-VITDRDAPGPVRDRVLDLVADYLA----------LGLDPGRTTIFAHSQVP 170

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            L  +    L     +    N  +  E         +  S L   Y + QA D +     
Sbjct: 171 ELNELMLPFLSLVTDAELRRNPTVKSE---LADSGGRPFSGLLLTYPVHQAADIL----F 223

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKT---------PKLFALTSPLLTTASGTKMGKTL 241
               L   G DQ  ++     +  R            P+     +P +    G KM K+ 
Sbjct: 224 CGANLVPVGKDQLPHLELARTIARRFAERYGDAGLVAPEALLTDAPHVLGLDGRKMSKSR 283

Query: 242 SGAIWL 247
             A+ L
Sbjct: 284 GNAVEL 289


>gi|199597823|ref|ZP_03211249.1| tryptophanyl-tRNA synthetase II [Lactobacillus rhamnosus HN001]
 gi|229551448|ref|ZP_04440173.1| tryptophan--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258509604|ref|YP_003172355.1| tryptophanyl-tRNA synthetase II [Lactobacillus rhamnosus GG]
 gi|258540808|ref|YP_003175307.1| tryptophanyl-tRNA synthetase II [Lactobacillus rhamnosus Lc 705]
 gi|199591259|gb|EDY99339.1| tryptophanyl-tRNA synthetase II [Lactobacillus rhamnosus HN001]
 gi|229315173|gb|EEN81146.1| tryptophan--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257149531|emb|CAR88504.1| Tryptophanyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257152484|emb|CAR91456.1| Tryptophanyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|259650870|dbj|BAI43032.1| tryptophanyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 338

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 51/176 (28%), Gaps = 25/176 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSI---IGDPSFRDESRRMMRSQE 98
            T   LH GH    +     LQ +G ++P  ++    ++     DP   ++ R  +    
Sbjct: 12  PTGR-LHIGHYIGSLKNRVELQNSGEYEPFVMIADTQALTDNANDP---EKIRHSLLEVA 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +              +     KT  L+ +    L  +    L     +    N  +  E 
Sbjct: 68  LDYLA----------VGIDPDKTTILVQSQIPALFELTAYYLDLVTVNRLERNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            +          F  F Y + QA D               G DQ   +    ++  
Sbjct: 118 KQKAFGDSVPAGF--FIYPVSQAADITAFK----ATTVPVGDDQEPMLEQTREIVR 167


>gi|229084572|ref|ZP_04216842.1| Pseudouridine synthase [Bacillus cereus Rock3-44]
 gi|228698722|gb|EEL51437.1| Pseudouridine synthase [Bacillus cereus Rock3-44]
          Length = 242

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  +++    ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKVVTELGTKVTPQDKVEVNNIPL 55


>gi|184155056|ref|YP_001843396.1| hypothetical protein LAF_0580 [Lactobacillus fermentum IFO 3956]
 gi|183226400|dbj|BAG26916.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
          Length = 262

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 65/232 (28%), Gaps = 16/232 (6%)

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  D++  A +    +     +     I  +    + +    F    P      G     
Sbjct: 21  QVNDWLTTAGDQYRPVLTAFLNPRQRYIMRVIANRQDEVKVAFKGAYPGAEMQRGLAYPA 80

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEIN 296
                    +      N+ Q +  +    V+           +  D        Q     
Sbjct: 81  YYQPTEDDFELQLLEINYPQKFAELHHRQVMGAVLSTGVERGAFGDIIASDEHWQIIVQR 140

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +    +  ++T++   +   EK               +    +  +   +      L  +
Sbjct: 141 QLSDYLIEQVTSIGKAKVRLEKREL-----QGARAPQEDWQELVTTVASLR-----LDAV 190

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLS 405
           V A F  S N A++ ++   +++N   I     ++  +D       G IK+ 
Sbjct: 191 VAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDLISVRHGGRIKVQ 242


>gi|29349280|ref|NP_812783.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253570374|ref|ZP_04847783.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           1_1_6]
 gi|298384818|ref|ZP_06994377.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           1_1_14]
 gi|29341188|gb|AAO78977.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251840755|gb|EES68837.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           1_1_6]
 gi|298261962|gb|EFI04827.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           1_1_14]
          Length = 496

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           +    +     +          + +  + L   +  AG   S  EA   + +  + +N  
Sbjct: 234 SDYDPNAKYSIKKQIEYKEQFVDPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGE 292

Query: 383 IISNEKLQIKLQDFDS 398
           +++    +IK  D   
Sbjct: 293 VVTELGTKIKRSDVVK 308


>gi|228990582|ref|ZP_04150547.1| Pseudouridine synthase [Bacillus pseudomycoides DSM 12442]
 gi|228996683|ref|ZP_04156320.1| Pseudouridine synthase [Bacillus mycoides Rock3-17]
 gi|229004333|ref|ZP_04162121.1| Pseudouridine synthase [Bacillus mycoides Rock1-4]
 gi|228756916|gb|EEM06173.1| Pseudouridine synthase [Bacillus mycoides Rock1-4]
 gi|228763002|gb|EEM11912.1| Pseudouridine synthase [Bacillus mycoides Rock3-17]
 gi|228769108|gb|EEM17706.1| Pseudouridine synthase [Bacillus pseudomycoides DSM 12442]
          Length = 244

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  +++    ++  QD     NI L
Sbjct: 6   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKVVTELGTKVTPQDKVEVNNIPL 57


>gi|242310659|ref|ZP_04809814.1| RNA pseudouridine synthase [Helicobacter pullorum MIT 98-5489]
 gi|239523057|gb|EEQ62923.1| RNA pseudouridine synthase [Helicobacter pullorum MIT 98-5489]
          Length = 250

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  EA R +    + IN  II +   Q+  +
Sbjct: 14  SRREADRLIAQGKVSINKEIIKDFSYQVDDK 44


>gi|78776590|ref|YP_392905.1| tryptophanyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497130|gb|ABB43670.1| tryptophanyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 319

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 89/332 (26%), Gaps = 36/332 (10%)

Query: 36  VTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q++  +  + +    ++    S   +  R+ 
Sbjct: 1   MRVLTGIQPSGD-LHIGNYFGSIKQMVDAQESS-QTFAFIANYHAM---TSGGKDLARLT 55

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                                    ++D   +    W+           + SF  +  + 
Sbjct: 56  MQCATDFLALG----IDPKKSIFWVQSDVKEVLELYWI-----------LSSFTPMGLLE 100

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + +  +    +   F+Y +L A D +     +   +   G DQ  ++    D+  
Sbjct: 101 RAHSYKDKTAKGIGANHSLFSYPVLMAADIL----IFGSEVVPVGKDQIQHVEIARDIAI 156

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW--RN 263
           R        LT P          +    G KM K+    I +  E  +     +     N
Sbjct: 157 RFNNQYGDILTIPEFRVQEEVQTVLGTDGQKMSKSYGNIINIFGEEKAQLKTIKKIVTEN 216

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           +   +   F                 L   +    K         M       E      
Sbjct: 217 VAVEEPKEFESCNVYNMAKLFLEGDNLIALQDRYKKGGEGHGHFKMYLAEVIWEYFKDFR 276

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            +      H   +  I     + +R + L T+
Sbjct: 277 QKREYFEAHQDEVRGILKVGADKAREIALPTI 308


>gi|326387186|ref|ZP_08208796.1| pseudouridine synthase, Rsu [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208367|gb|EGD59174.1| pseudouridine synthase, Rsu [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 316

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            G  +  L+ +AG A S  +  R +    IK+N+ +++     +
Sbjct: 74  EGERIAKLLARAGIA-SRRDVERMIGEGRIKLNDELVTTPATLL 116


>gi|302871910|ref|YP_003840546.1| hemolysin A [Caldicellulosiruptor obsidiansis OB47]
 gi|302574769|gb|ADL42560.1| hemolysin A [Caldicellulosiruptor obsidiansis OB47]
          Length = 269

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G A S  +AR  + S  + +NN  I      I   
Sbjct: 8   LLVEKGLAASREKARALILSGNVYVNNQKIEKAGEMIDES 47


>gi|169840905|ref|ZP_02874018.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 58

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             F  N ML  +   +R+     LSFLEFNYMILQ+YDF  L  +Y C +Q GG DQW  
Sbjct: 1   RIFPYNNMLRAKCYENRM--ANGLSFLEFNYMILQSYDFYRLFLDYGCNMQFGGDDQWYK 58


>gi|118579018|ref|YP_900268.1| tryptophanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118501728|gb|ABK98210.1| tryptophanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 355

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 69/249 (27%), Gaps = 30/249 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                  G   T   LH GHL   +     LQ  G     ++     +         + R
Sbjct: 25  KKFRVLTGDRPTGR-LHVGHLFGSLQNRIRLQSLGVPTFIVIADYQVL---------TDR 74

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
                  +  ++      S  I      TD    ++   L  +    L     S    N 
Sbjct: 75  DHFDSIAENTLQLAIDYLSVGIDPIGEDTDIFPHSHVPELNQLLLPFLTLVTLSELDRNP 134

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E ++S   +  +     + Y I QA D +         +   G DQ  ++     +
Sbjct: 135 TV-KEEIQSAGLKRINAGM--YTYPIHQAADIL----FCKGNVVPVGKDQLPHLEITRTI 187

Query: 213 GERLKTP------------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
             R                 L +    +L      KM K+ + AI L+          + 
Sbjct: 188 ARRFNEKFGQGKQVFPEPQPLLSQAPLILGLDGSQKMSKSRNNAIMLSATAEETAALIKK 247

Query: 261 WRNIDDADV 269
            +   +  +
Sbjct: 248 AKTDSERRI 256


>gi|126663357|ref|ZP_01734355.1| ribosomal large subunit pseudouridine synthase F [Flavobacteria
           bacterium BAL38]
 gi|126625015|gb|EAZ95705.1| ribosomal large subunit pseudouridine synthase F [Flavobacteria
           bacterium BAL38]
          Length = 262

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                +   + + GF  S  EA R ++   + IN   +     ++   D        + 
Sbjct: 3   ENATRINKFLSETGFC-SRREADRLIEQGRVTING-KVPEMGTKVTPSDEVRVNGKLIQ 59


>gi|323352538|gb|EGA85037.1| Nam9p [Saccharomyces cerevisiae VL3]
          Length = 486

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 14/113 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG              F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLT---EKRWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                   + +A FA+S  +AR+ +    +++N   I +    +K  D  S  
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVK 153


>gi|323303395|gb|EGA57191.1| Nam9p [Saccharomyces cerevisiae FostersB]
          Length = 486

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 14/113 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG              F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLT---EKRWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                   + +A FA+S  +AR+ +    +++N   I +    +K  D  S  
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVK 153


>gi|298480189|ref|ZP_06998387.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D22]
 gi|298273470|gb|EFI15033.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D22]
          Length = 495

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 255 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 307


>gi|293369516|ref|ZP_06616095.1| pseudouridylate synthase [Bacteroides ovatus SD CMC 3f]
 gi|292635401|gb|EFF53914.1| pseudouridylate synthase [Bacteroides ovatus SD CMC 3f]
          Length = 485

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 245 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 297


>gi|262408169|ref|ZP_06084716.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_22]
 gi|262353721|gb|EEZ02814.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_22]
          Length = 495

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 255 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 307


>gi|260171988|ref|ZP_05758400.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D2]
 gi|315920300|ref|ZP_07916540.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D2]
 gi|313694175|gb|EFS31010.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D2]
          Length = 482

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 242 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 294


>gi|254671590|emb|CBA09257.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 133

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE    +H                +      ++   ++  ++ +  + L  L+  AG A 
Sbjct: 24  TEQAVRIHRWFCGNFGYGGGRCYNNGLFLQGNIMEATVYLED-NEYIALCDLLKLAGLAE 82

Query: 364 STNEARRHLKSNAIKINNS 382
           S  +A+  +    +  N  
Sbjct: 83  SGGQAKALIAEGLVSRNGE 101


>gi|237719081|ref|ZP_04549562.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_2_4]
 gi|229451460|gb|EEO57251.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_2_4]
          Length = 493

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 253 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 305


>gi|153809092|ref|ZP_01961760.1| hypothetical protein BACCAC_03402 [Bacteroides caccae ATCC 43185]
 gi|149128425|gb|EDM19644.1| hypothetical protein BACCAC_03402 [Bacteroides caccae ATCC 43185]
          Length = 494

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 254 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 306


>gi|40063126|gb|AAR37973.1| tryptophanyl-tRNA synthetase [uncultured marine bacterium 561]
          Length = 335

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 82/299 (27%), Gaps = 34/299 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   ++        +    ++I     +     ++    ++     + 
Sbjct: 17  HLGNYVGAIRPAVLASREAEVDAYLFLADYHALI-----KCHDPAVVAQSSLEIAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
               +   +   ++D   +   +W+ +      L      +      + E   +    + 
Sbjct: 72  SGLDAEQAHFYRQSDIPEVTELSWILTCNAAKGLMNRAHAYKAAVQSNRE---AEEDPDF 128

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F+Y +L A D + +   +D  +   G DQ  ++    D+ +R         T P
Sbjct: 129 GVTMGLFSYPVLMAADIL-IFNAHDVPV---GRDQIQHVEMARDIAQRFNHNFSNIFTLP 184

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN----------IDDAD 268
                    +L    G KM K+    I L              +            +++ 
Sbjct: 185 KAVVGEHVAVLQGLDGRKMSKSYGNTIPLFGTPKQLQKSINKIKTNLLEPGEPKIPEEST 244

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           V        T             G    +AKK +  E+                A    
Sbjct: 245 VFQIWSAFATDDERARMYADFEGGIGWGDAKKQL-FELVNGELAEARERYNELMAKPMQ 302


>gi|75910708|ref|YP_325004.1| hemolysin A [Anabaena variabilis ATCC 29413]
 gi|75704433|gb|ABA24109.1| Hemolysin A [Anabaena variabilis ATCC 29413]
          Length = 272

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+V+     S   A+R +++  + +N  +I     ++ +        
Sbjct: 8   NLLVELNLCNSRTLAQRLIQAGEVTVNEQVIDKPGTEVDVAAQIKIKE 55


>gi|331003032|ref|ZP_08326544.1| tryptophanyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330413076|gb|EGG92451.1| tryptophanyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 362

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 24/179 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +  M   ++++
Sbjct: 11  PTGK-LHVGHYIGSVKRRVELQNSGEFKKIFIMVADAQAL---------TDNMENPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G     + +        L  + +  +     S    N  +  E 
Sbjct: 61  QNI---IEVVLDYLACGIDPKKSTIFIQSMVPELTELAFYYMNLVTVSRLQRNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                +    + F  F Y I QA D               G DQ   I    ++  +  
Sbjct: 118 GLRNFENSIPVGF--FTYPISQASDITAFK----ATTVPVGEDQLPMIEQTREIVRKFN 170


>gi|190409124|gb|EDV12389.1| mitochondrial S4 ribosomal protein [Saccharomyces cerevisiae
           RM11-1a]
 gi|207341770|gb|EDZ69735.1| YNL137Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259149224|emb|CAY82466.1| Nam9p [Saccharomyces cerevisiae EC1118]
 gi|323307464|gb|EGA60737.1| Nam9p [Saccharomyces cerevisiae FostersO]
 gi|323331931|gb|EGA73343.1| Nam9p [Saccharomyces cerevisiae AWRI796]
 gi|323335936|gb|EGA77214.1| Nam9p [Saccharomyces cerevisiae Vin13]
 gi|323346867|gb|EGA81146.1| Nam9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 486

 Score = 41.7 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 14/113 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG              F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLT---EKRWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                   + +A FA+S  +AR+ +    +++N   I +    +K  D  S  
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVK 153


>gi|312135105|ref|YP_004002443.1| hemolysin a [Caldicellulosiruptor owensensis OL]
 gi|311775156|gb|ADQ04643.1| hemolysin A [Caldicellulosiruptor owensensis OL]
          Length = 269

 Score = 41.7 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G A S  +AR  + S  + +NN  I      I   
Sbjct: 8   LLVEKGLAASREKARALILSGNVYVNNQKIEKAGEMIDES 47


>gi|237752429|ref|ZP_04582909.1| RNA pseudouridine synthase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375918|gb|EEO26009.1| RNA pseudouridine synthase [Helicobacter winghamensis ATCC BAA-430]
          Length = 262

 Score = 41.7 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  EA R +K   + IN  ++S+   Q+   
Sbjct: 14  SRREADRLIKEGKVTINKEVVSDFSYQVDKN 44


>gi|151944400|gb|EDN62678.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
           YJM789]
          Length = 486

 Score = 41.7 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 14/113 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG              F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLT---EKRWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                   + +A FA+S  +AR+ +    +++N   I +    +K  D  S  
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVK 153


>gi|6324192|ref|NP_014262.1| Nam9p [Saccharomyces cerevisiae S288c]
 gi|1346661|sp|P27929|NAM9_YEAST RecName: Full=37S ribosomal protein NAM9, mitochondrial; AltName:
           Full=Nuclear accommodation of mitochondria protein 9;
           Flags: Precursor
 gi|507139|gb|AAA19439.1| NAM9+ protein [Saccharomyces cerevisiae]
 gi|854500|emb|CAA86888.1| mitochondrial ribosomal protein (putative) [Saccharomyces
           cerevisiae]
 gi|1302082|emb|CAA96019.1| NAM9 [Saccharomyces cerevisiae]
 gi|285814517|tpg|DAA10411.1| TPA: Nam9p [Saccharomyces cerevisiae S288c]
          Length = 486

 Score = 41.7 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 14/113 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG              F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLT---EKRWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                   + +A FA+S  +AR+ +    +++N   I +    +K  D  S  
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVK 153


>gi|149911772|ref|ZP_01900377.1| hypothetical protein PE36_14851 [Moritella sp. PE36]
 gi|149805160|gb|EDM65181.1| hypothetical protein PE36_14851 [Moritella sp. PE36]
          Length = 200

 Score = 41.7 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 23/58 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I        + L  ++      TS +EA+ ++    + +N  + + ++ +I   D   
Sbjct: 10  IPVVVAEEPIELYKILKIENLVTSGSEAKNYIADGYVYVNGEVETRKRKKIMFGDIIG 67


>gi|312072137|ref|XP_003138928.1| hypothetical protein LOAG_03343 [Loa loa]
 gi|307765903|gb|EFO25137.1| hypothetical protein LOAG_03343 [Loa loa]
          Length = 1347

 Score = 41.7 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 90/319 (28%), Gaps = 17/319 (5%)

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           +  S      Q  ++N+   K   SS  +     T     N         Y  +      
Sbjct: 595 KSSSDSQEMKQNGRKNVLIEKEQNSSHSESLLDLTTKNTSNYNELEEDNMYDVISFPYQI 654

Query: 147 FFSVNRMLSFE-SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
               N  +  +    S  +   S        M L+      + +  D + +     ++ N
Sbjct: 655 HKVRNEQMPSDSCFSSTDEGRASNVSRLMLEMELRNCREESVWRFNDFKAE-----KFEN 709

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
                +L          A+   L+   +       L     ++++  S       +   +
Sbjct: 710 CHKFDELHNTEVATTQVAIDKKLIYEDNRDLFNNDLDERYLISRKQQSDSISNLKFDETN 769

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
                   +  +   M +     K +     + ++    E       ++   +      +
Sbjct: 770 STASDILDEIYSDYDMVKKRERNKEEQSFTVKGREWS--ESANEEADKKFQIQEMNIIRK 827

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA-GFATSTNEARRHL---KSNAIKINN 381
                  S  + T  I++ E  +   L  + VK  G A      R  +   K   IK N+
Sbjct: 828 FETYGTKSDELATAEITRSEDQKTDDLRQIKVKNEGLA-----LRHSINGTKQEGIKYND 882

Query: 382 SIISNEKLQIKLQDFDSTG 400
             +  E+ +++  +    G
Sbjct: 883 LKVEREEWKVEGDETYQNG 901


>gi|116496052|ref|YP_807786.1| tryptophanyl-tRNA synthetase II [Lactobacillus casei ATCC 334]
 gi|191639533|ref|YP_001988699.1| tryptophanyl-tRNA synthetase II [Lactobacillus casei BL23]
 gi|227532965|ref|ZP_03963014.1| tryptophanyl-tRNA synthetase II [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239630456|ref|ZP_04673487.1| tryptophanyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301067608|ref|YP_003789631.1| tryptophanyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116106202|gb|ABJ71344.1| tryptophanyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190713835|emb|CAQ67841.1| Tryptophanyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|227189366|gb|EEI69433.1| tryptophanyl-tRNA synthetase II [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526739|gb|EEQ65740.1| tryptophanyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300440015|gb|ADK19781.1| Tryptophanyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|327383633|gb|AEA55109.1| Tryptophanyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386824|gb|AEA58298.1| Tryptophanyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 338

 Score = 41.7 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 51/176 (28%), Gaps = 25/176 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSI---IGDPSFRDESRRMMRSQE 98
            T   LH GH    +     LQ +G ++P  ++    ++     DP   ++ R  +    
Sbjct: 12  PTGR-LHIGHYIGSLKNRVELQNSGEYEPFVMIADTQALTDNANDP---EKIRHSLLEVA 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +              +     KT  L+ +    L  +    L     +    N  +  E 
Sbjct: 68  LDYLA----------VGIDPDKTTILVQSQIPALFELTAYYLDLVTVNRLERNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            +          F  F Y + QA D               G DQ   +    ++  
Sbjct: 118 KQKAFGDSVPAGF--FIYPVSQAADITAFK----ATTVPVGDDQEPMLEQTREIVR 167


>gi|15791051|ref|NP_280875.1| tryptophanyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236801|ref|YP_001690001.1| tryptophan--tRNA ligase [Halobacterium salinarum R1]
 gi|20178139|sp|Q9HN66|SYW2_HALSA RecName: Full=Tryptophanyl-tRNA synthetase 2; AltName:
           Full=Tryptophan--tRNA ligase 2; Short=TrpRS 2
 gi|10581646|gb|AAG20355.1| tryptophanyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727867|emb|CAP14655.1| tryptophan--tRNA ligase [Halobacterium salinarum R1]
          Length = 380

 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 5/66 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK-TGHKP 70
           L  RG  +     R++D   + G  +   G   +   +H GH         LQ   G + 
Sbjct: 45  LVNRGLFYA---GRDVDDFLTAGEQSIVTGVGPSGP-MHLGHAMVFYFARRLQDEFGARV 100

Query: 71  ISLMGG 76
              +  
Sbjct: 101 YVPLSD 106


>gi|300728207|ref|ZP_07061576.1| tryptophan--tRNA ligase [Prevotella bryantii B14]
 gi|299774546|gb|EFI71169.1| tryptophan--tRNA ligase [Prevotella bryantii B14]
          Length = 362

 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 93/326 (28%), Gaps = 51/326 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGDYDKMFVFMADVQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI          + Y +   D             +  +L   + +  +V+R+    +V+
Sbjct: 61  QNI------IEVALDYLSAGLDPAKCTLYIQSQIPELAELTTYLMNLITVSRVQRNPTVK 114

Query: 161 SRLKREQ---SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           + +K      ++    F Y + QA D               G DQ   +    +L  R  
Sbjct: 115 TEIKMRNFEANIPLGFFCYPVSQAADIAAFK----ATTVPAGEDQEPMLEVTRELVRRFN 170

Query: 218 TPKLFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR--- 262
                 L  P +             T    KM K+L   I+L+ +  + ++  +      
Sbjct: 171 QTYADVLVEPNILLPENATARRLPGTDGKEKMSKSLGNCIYLSDDKDTVWSKVKSMYTDP 230

Query: 263 ---------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
                    +++   V ++    +T      +   + Q  +  +A               
Sbjct: 231 THVNVSDPGHVEGNAVFTYLDAFST-DEDFAEFWPEFQNLDELKAAYTAGGIGDMKCKKL 289

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTI 339
                             + Q +P I
Sbjct: 290 LNNVINKMLDPIRARRREYEQDIPEI 315


>gi|315127932|ref|YP_004069935.1| 30S ribosomal protein S4 [Pseudoalteromonas sp. SM9913]
 gi|332533190|ref|ZP_08409057.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis ANT/505]
 gi|315016446|gb|ADT69784.1| 30S ribosomal protein S4 [Pseudoalteromonas sp. SM9913]
 gi|332037269|gb|EGI73724.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis ANT/505]
          Length = 206

 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++  EAR+ +   AI +N  +++     I
Sbjct: 78  EAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAILVNGRVVNIPSYVI 137

Query: 392 KLQD 395
             +D
Sbjct: 138 TPED 141


>gi|332557705|ref|ZP_08412027.1| RNA-binding S4 domain-containing protein [Rhodobacter sphaeroides
           WS8N]
 gi|332275417|gb|EGJ20732.1| RNA-binding S4 domain-containing protein [Rhodobacter sphaeroides
           WS8N]
          Length = 385

 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  +A R ++   I +N   I +  L +  +D  
Sbjct: 3   DSKDGERIAKVLSRAGIA-SRRDAERMIELGRIAVNGRTIDSPALNVGPKDRI 54


>gi|221638684|ref|YP_002524946.1| Pseudouridine synthase [Rhodobacter sphaeroides KD131]
 gi|221159465|gb|ACM00445.1| Pseudouridine synthase [Rhodobacter sphaeroides KD131]
          Length = 491

 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  +A R ++   I +N   I +  L +  +D  
Sbjct: 3   DSKDGERIAKVLSRAGIA-SRRDAERMIELGRIAVNGRTIDSPALNVGPKDRI 54


>gi|126461709|ref|YP_001042823.1| RNA-binding S4 domain-containing protein [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126103373|gb|ABN76051.1| RNA-binding S4 domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 489

 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  +A R ++   I +N   I +  L +  +D  
Sbjct: 3   DSKDGERIAKVLSRAGIA-SRRDAERMIELGRIAVNGRTIDSPALNVGPKDRI 54


>gi|77462817|ref|YP_352321.1| pseudouridine synthase [Rhodobacter sphaeroides 2.4.1]
 gi|77387235|gb|ABA78420.1| Pseudouridine synthase, (predicted) [Rhodobacter sphaeroides 2.4.1]
          Length = 508

 Score = 41.7 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  +A R ++   I +N   I +  L +  +D  
Sbjct: 3   DSKDGERIAKVLSRAGIA-SRRDAERMIELGRIAVNGRTIDSPALNVGPKDRI 54


>gi|186685337|ref|YP_001868533.1| hemolysin A [Nostoc punctiforme PCC 73102]
 gi|186467789|gb|ACC83590.1| hemolysin A [Nostoc punctiforme PCC 73102]
          Length = 272

 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 21/47 (44%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           L+V+    +S   A+R +++  + +N  ++     ++ +    +   
Sbjct: 9   LLVELNLCSSRALAQRLIQAGEVTVNQQLVDKPGTEVDISAQINIKE 55


>gi|119504000|ref|ZP_01626081.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2080]
 gi|119460003|gb|EAW41097.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2080]
          Length = 335

 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 67/210 (31%), Gaps = 23/210 (10%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   ++        +    ++I     +     ++    ++     + 
Sbjct: 17  HLGNYVGAIRPAVLASREAEVDAYLFLADYHALI-----KCHDPAVVAQSSLEIAATWLA 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
               +   +   ++D   +   +W+ +      L      +      + E   +    + 
Sbjct: 72  SGLDAEQAHFYRQSDIPEVTELSWILTCNAAKGLMNRAHAYKAAVQSNRE---AEEDPDF 128

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F+Y +L A D + +   +D  +   G DQ  ++    D+ +R         T P
Sbjct: 129 GVTMGLFSYPVLMAADIL-IFNAHDVPV---GRDQIQHVEMARDIAQRFNHNFSNIFTLP 184

Query: 228 ---------LLTTASGTKMGKTLSGAIWLN 248
                    +L    G KM K+    I L 
Sbjct: 185 KAVVGEHVAVLQGLDGRKMSKSYGNTIPLF 214


>gi|161751105|ref|NP_376017.2| tryptophanyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|20178130|sp|Q976M1|SYW_SULTO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
          Length = 381

 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 74/262 (28%), Gaps = 24/262 (9%)

Query: 3   AFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLML 59
           +  +D L ++  R       +    L           Y G    A SL  H GHL   + 
Sbjct: 40  SIINDELHVMLRRDVFFSHRDLDLVLKDYQDGKGFFLYTGR---APSLGMHIGHLIPFIF 96

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
             WLQ         +      I D    DE         + +  +         I  G  
Sbjct: 97  TKWLQDK-FNVNLYI-----EITD----DEKFMRNPEYTLDQTRQWAYDNILDIIAVGFN 146

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  +  ++ ++  I +         + + L+F  VR+    + S +     Y  L
Sbjct: 147 PDKTFIFQDTEYIRNMYPIAI--------KIAKKLTFSEVRATFGLDTSSNIGIIWYPAL 198

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q    +   +       +     W       +     K  ++ +   P LT   G     
Sbjct: 199 QIAPTMFEKRRCLIPAGIDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSSS 258

Query: 240 TLSGAIWLNKEMTSPYNFWQYW 261
               AI+L  +  +       +
Sbjct: 259 QPETAIYLTDDPKTVERKIMKY 280


>gi|325969826|ref|YP_004246018.1| tryptophanyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323709029|gb|ADY02516.1| tryptophanyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 356

 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 12 LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          L  R F +   + + +      G     Y G   +A  LH GHL   ML  W   
Sbjct: 30 LIRRNFFYAHRDLQSILNRQRNGLKWALYNGRGPSAD-LHIGHLVPWMLSKWFVD 83


>gi|239917013|ref|YP_002956571.1| tryptophanyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414525|ref|ZP_06246267.1| tryptophanyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838220|gb|ACS30017.1| tryptophanyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 360

 Score = 41.7 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 33/236 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +A SLH G+    ++ +   +   +    +    +             +   Q+  
Sbjct: 34  GMQPSADSLHLGNYLGALVNWERTQADFEAFFFIPDLHA-------------ITVPQDPA 80

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E+ +   + FI  G     + +          +   +L  +       RM  F+  +
Sbjct: 81  ALAERTRVAAAQFIAGGIDPERSTLFVQSQVPEHAQLAWVLTCMTGMGEAMRMTQFKD-K 139

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           S  +   +       Y +L A D + L + +   +   G DQ  ++    DL +R     
Sbjct: 140 SAKQGADAAGVGLLAYPMLMAADIL-LYQPHGVPV---GDDQRQHVELTRDLAQRFNHR- 194

Query: 221 LFALTSPLLTTASGT-------------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            +  T  + T                  KM K+ +    L   +  P    +  ++
Sbjct: 195 -YGETFVVPTGFYPETGARIYDLQDPTSKMSKSAASPNGLINVLDEPKKTAKKIKS 249


>gi|160894187|ref|ZP_02074965.1| hypothetical protein CLOL250_01741 [Clostridium sp. L2-50]
 gi|156864220|gb|EDO57651.1| hypothetical protein CLOL250_01741 [Clostridium sp. L2-50]
          Length = 356

 Score = 41.7 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G+  +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLSERVKLQNSGNYDEIYIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     S    N  +  E   
Sbjct: 61  QNIIQV-ALDYLACGIDPEKSTIFIQSMVPELTELSFYYMNLVTVSRVQRNPTVKSEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D     +  +  +   G DQ   +    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAF-RATEVPV---GEDQLPMLEQCKEIVHKFNSVY 173

Query: 221 LFALTSPLLTTASGTKM 237
              LT P +   S    
Sbjct: 174 GETLTDPEIVLPSNKAC 190


>gi|2501069|sp|Q46127|SYW_CLOLO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|1100074|gb|AAC05711.1| tryptophanyl-tRNA synthetase [Clostridium longisporum]
          Length = 341

 Score = 41.7 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 45/320 (14%), Positives = 86/320 (26%), Gaps = 49/320 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G ++   ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYVGSLKNRVQLQNSGDYRSFIMIADQQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+  L+ +    L  +    L     S    N  +  E  + 
Sbjct: 65  EVALDY----LAVGIDPLKSTILVQSQIPELNELTMHYLNLVTLSRLERNPTVKAEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
             +      F    Y + QA D               G DQ   I    ++     T   
Sbjct: 121 NFENSIPAGF--LIYPVSQAADITAFK----ATTVPVGEDQLPMIEQAREIVRSFNTIYG 174

Query: 219 PKLFALTSPLLT---------TASGTKMGKTLSGAIWLNKEMT-------SPYNFWQYWR 262
            ++      ++          T    KM K++  AI+L  E         S Y    + +
Sbjct: 175 KEVLVEPKAVIPKGTIGRLPGTDGKAKMSKSIGNAIYLADEADVIKQKVMSMYTDPNHIK 234

Query: 263 NIDDADVV---SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
             D   V     F    T    +E     K            +   +  ++    E  + 
Sbjct: 235 VTDPGQVEGNTVFTYLDTFCKDTETLEEMKAHYSRGGLGDVKVKKFLNEILQAELEPIR- 293

Query: 320 ATAAMECFDMSIHSQHMPTI 339
                         + +P +
Sbjct: 294 -------NRRKEFQKDIPEV 306


>gi|294806727|ref|ZP_06765554.1| pseudouridylate synthase [Bacteroides xylanisolvens SD CC 1b]
 gi|294446009|gb|EFG14649.1| pseudouridylate synthase [Bacteroides xylanisolvens SD CC 1b]
          Length = 319

 Score = 41.3 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 79  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 131


>gi|294645459|ref|ZP_06723160.1| pseudouridylate synthase [Bacteroides ovatus SD CC 2a]
 gi|292639160|gb|EFF57477.1| pseudouridylate synthase [Bacteroides ovatus SD CC 2a]
          Length = 320

 Score = 41.3 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 80  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 132


>gi|149916264|ref|ZP_01904785.1| NAD(P) transhydrogenase subunit alpha [Roseobacter sp. AzwK-3b]
 gi|149809924|gb|EDM69775.1| NAD(P) transhydrogenase subunit alpha [Roseobacter sp. AzwK-3b]
          Length = 348

 Score = 41.3 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 14/26 (53%)

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQD 395
           R +   A+ +N + +++ K +I   D
Sbjct: 39  RLIAEGAVSVNGTPVTDPKSRISEGD 64


>gi|229541389|ref|ZP_04430449.1| tryptophanyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325809|gb|EEN91484.1| tryptophanyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 330

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 25/212 (11%)

Query: 44  LTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            + + +H G+    M     LQ +       +    + I  P  R E R+          
Sbjct: 10  PSGT-IHIGNYLGSMKQFVELQNS-FNCYFCIADEHA-ITVPQDRLELRK---------- 56

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRMLSFESVRS 161
              I+ + + ++  G     A +         +        +    + V  +      + 
Sbjct: 57  --NIRSLAAFYLAVGIDPNKATLFIQSE----VPAHAQAAWMLQCVAYVGELERMTQFKD 110

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           +   ++S+S     Y  L A D +     Y   L   G DQ  ++    DL ER     L
Sbjct: 111 KSAGKESVSAGLLTYPPLMAADIL----LYSTDLVPVGEDQKQHLELTRDLAERFNKRYL 166

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
              T P +  ++      +L   +    +   
Sbjct: 167 EIFTLPDIKLSNSGARIMSLQDPMKKMSKSDP 198


>gi|146296859|ref|YP_001180630.1| hemolysin A [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410435|gb|ABP67439.1| hemolysin A [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 270

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 8/72 (11%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK--LSFG--K-- 408
           L+V+ GFA S  +AR  + S  + +NN  I      I              +S G  K  
Sbjct: 8   LLVEKGFAESREKARALILSGNVYVNNQKIEKAGELIDCNAQIVVKEQLKFVSRGGLKLE 67

Query: 409 K--NHIICHLCG 418
           K  N     + G
Sbjct: 68  KALNFFSIDVSG 79


>gi|288929146|ref|ZP_06422991.1| ribosomal large subunit pseudouridine synthase B [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288329248|gb|EFC67834.1| ribosomal large subunit pseudouridine synthase B [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 509

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-- 395
                  + +  + L   +  AG   S  EA + ++S  +K+N ++++    ++   D  
Sbjct: 262 EYKEENIDPNEPLRLNKFLANAGVC-SRREADQFIQSGMVKVNGNVVTELGTKVLRSDEI 320

Query: 396 FDSTGNIKLSFGKKNHIICH 415
                 + L   KK +++ +
Sbjct: 321 IFHDQPVTLE--KKVYVLIN 338


>gi|261367368|ref|ZP_05980251.1| ribosomal large subunit pseudouridine synthase B [Subdoligranulum
           variabile DSM 15176]
 gi|282570129|gb|EFB75664.1| ribosomal large subunit pseudouridine synthase B [Subdoligranulum
           variabile DSM 15176]
          Length = 267

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 10/70 (14%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSII-----SNEKLQIKLQDFDSTGNIKLSF 406
           +  ++   G   S  EA R + +  +K+N   +      +          D      +  
Sbjct: 6   IQKVLADQGIC-SRREAERLIAAGKVKVNGRPVGLGDKMDPDY--DKVSIDGKNVRIVR- 61

Query: 407 GKKNHIICHL 416
            K+ +    L
Sbjct: 62  -KRQYTYIML 70


>gi|297171070|gb|ADI22082.1| tryptophanyl-tRNA synthetase [uncultured Planctomycetales bacterium
           HF0200_11L05]
          Length = 335

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 94/322 (29%), Gaps = 46/322 (14%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   +L  +     T  +    +    S+I        +   +      E      
Sbjct: 18  HIGNLAGAILPAIKASLNTSTESFLFLADYHSLI------KNNDPELTHSSSFEIAACW- 70

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV--RSRLK 164
                 +  G    + +          ++   +L  + S   +NR  +   SV    +  
Sbjct: 71  ------LACGLDPEEVIFYRQSDIPHIMELTWVLGCLTSKGLMNRAHAYKASVAENKKND 124

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL 224
            ++ ++   FNY IL A D +      +  +   G DQ  ++    D+  R         
Sbjct: 125 PDKGITMGLFNYPILMAADILMF----NADVVPVGQDQKQHVEMTRDIALRFNHHYGDVF 180

Query: 225 TSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
             P          L    G KM K+    I +     +  +  +    I           
Sbjct: 181 NIPDVSIEEDAGTLPGIDGRKMSKSYKNVIPIF---LNKDDLRKKIMKIK---------- 227

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             T      +     +    N  K   + ++T  +  + +   A   A E     +  + 
Sbjct: 228 --TDSKEPGEPKEIEESSIFNIYKAFASEKLTAELTNKYKEGIAWGKAKELLFELLEEKI 285

Query: 336 MPTISISKDEVSRGMGLLTLIV 357
            P     ++ +    GL  +++
Sbjct: 286 NPLRKNYEELIDDRTGLEKILM 307


>gi|282899112|ref|ZP_06307093.1| RNA-binding S4 [Cylindrospermopsis raciborskii CS-505]
 gi|281196028|gb|EFA70944.1| RNA-binding S4 [Cylindrospermopsis raciborskii CS-505]
          Length = 259

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 8/127 (6%)

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             A+ I+  E+   +    +  ++     +  D S      P        V   + L   
Sbjct: 131 RGAQAIVVPELAEFLTMNLQQVRSVPVKTQVIDSSELKIREPKKK-ELTTVEASLRL-DA 188

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG-----KK 409
           I  AGF  S ++    + S  +++N   I+    Q+K+ D  +  G  +L  G     KK
Sbjct: 189 IASAGFGMSRSKMVDLIDSGDVRVNWKEITQSSYQLKMGDLIAIRGKGRLQVGEIAVTKK 248

Query: 410 NHIICHL 416
           +     L
Sbjct: 249 DRYRIQL 255


>gi|255948696|ref|XP_002565115.1| Pc22g11690 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592132|emb|CAP98457.1| Pc22g11690 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 457

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 54/169 (31%), Gaps = 10/169 (5%)

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
            +    +   +      + +  + P     +++          AK  +     E  R  +
Sbjct: 9   LSKGKIRQSWSKYNLYNMQRFRSPPTTNRTFFQQK------WSAKAASRAYHGEQVREGQ 62

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT--ISISKDEVS 347
            +    +  + +I    + +         +   +          Q  PT    ++   + 
Sbjct: 63  WKRMFNHRIRSVIPMNASDLAADDGSLVSSGRGSGLDKGGKPAYQTRPTPYTHMTFAPLE 122

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           R + +   I +A FA+S  +AR+ +   A+ +N   + +    +   D 
Sbjct: 123 RRLDV--AIFRALFASSARQARQFVIHGAVTVNGQKMKHPSYLLNPGDL 169


>gi|225027595|ref|ZP_03716787.1| hypothetical protein EUBHAL_01852 [Eubacterium hallii DSM 3353]
 gi|224955111|gb|EEG36320.1| hypothetical protein EUBHAL_01852 [Eubacterium hallii DSM 3353]
          Length = 353

 Score = 41.3 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 60/197 (30%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLSERVRLQNSGDYDEIYIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     +    N  +  E   
Sbjct: 61  QNIIQV-ALDYLACGIDPEKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKSEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFR----ATTVPVGEDQMPMIEQCKEIVHKFNSVY 173

Query: 221 LFALTSPLLTTASGTKM 237
              LT P +   S    
Sbjct: 174 GETLTDPQIVLPSNKAC 190


>gi|196018955|ref|XP_002118899.1| hypothetical protein TRIADDRAFT_34916 [Trichoplax adhaerens]
 gi|190577809|gb|EDV18614.1| hypothetical protein TRIADDRAFT_34916 [Trichoplax adhaerens]
          Length = 222

 Score = 41.3 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 72/243 (29%), Gaps = 33/243 (13%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRD 88
           +  +       G   T   LH GH    +     LQK  +    ++    ++        
Sbjct: 1   MAEKKKKRILTGDRPTGK-LHLGHYVGSLQNRVRLQKE-YDTFLIIADVQAL-------- 50

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
                  + E  E + +     ++         +   +  ++     +  +L        
Sbjct: 51  -----TTNFETPEKLSRDVRQVATDYLAVGIDPEVTTIFVQS--MVPEIAELTVFYSMIV 103

Query: 149 SVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           +VN++    +++S         +++    Y + QA D           L   G DQ  +I
Sbjct: 104 TVNQLRHNPTIKSEAAQYGYNDMTYGFLGYPVSQAADIT----FCKANLVPVGEDQLPHI 159

Query: 207 ICGIDLGERLKT---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
                +  +              L +    L+     +KM K+L  AI+L+         
Sbjct: 160 EQTRRIVRKFNNLYAPVFPEPEALVSDIPRLVGLDGKSKMSKSLDNAIYLSDSEEEVNRK 219

Query: 258 WQY 260
            Q 
Sbjct: 220 VQK 222


>gi|83944323|ref|ZP_00956778.1| tryptophanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83844867|gb|EAP82749.1| tryptophanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 338

 Score = 41.3 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 66/209 (31%), Gaps = 28/209 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              + G   +   LH G+      L      Q  G + I  M    +             
Sbjct: 8   PRVFSGIQPSGD-LHLGNYLG--ALKRFADAQDKGVQSIYCMVDLHA------------- 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +   Q+  +     + + + FI  G     ++++N        +   +   +     + R
Sbjct: 52  ITVWQDPADLKRSTRELCAGFIASGIDPDKSILINQSQVPEHAQLAWVFNCVARMGWMGR 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  ++      K  ++ S   F Y  L A D + +       +   G DQ  ++    D+
Sbjct: 112 MTQWKD--KAGKNAEAASLGLFAYPALMAADIL-IYHATHVPV---GEDQKQHLELTRDI 165

Query: 213 GERLKTP---KLFALTSPLLTTASGTKMG 238
             +         F LT P++  A+   M 
Sbjct: 166 AAKFNHDYGVDFFPLTEPVIEGAATRVMS 194


>gi|124513482|ref|XP_001350097.1| tryptophan--tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23615514|emb|CAD52506.1| tryptophan--tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 632

 Score = 41.3 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 65/225 (28%), Gaps = 14/225 (6%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              RG      +    L+          Y G   ++ S+H GHL       +LQ+  + P
Sbjct: 278 FIRRGIFFSHRDLDFLLNYYEQHKCFYIYTGRGPSSLSMHLGHLIPFYFCKYLQEAFNVP 337

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +       + D    DE     ++  ++             I  G       +  N  
Sbjct: 338 LVI------QLSD----DEKYLFNQNYSLEYINTLTNENVKDIISVGLNPELTFIFKNTE 387

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +  +      +  I    ++N+ ++     +       +S+  F      +  F      
Sbjct: 388 Y--AGYLYPTVLSIHKKTTLNQSMNVFGF-NHSDNIGKISYPSFQIAPCFSQCFPNFLGK 444

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
               L   G DQ        D+  ++   K   + S  +    G 
Sbjct: 445 NIPCLVPQGIDQDPYFRLSRDIAVKMALHKPVVVHSVFMPGLQGV 489


>gi|83953365|ref|ZP_00962087.1| tryptophanyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842333|gb|EAP81501.1| tryptophanyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 338

 Score = 41.3 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 66/209 (31%), Gaps = 28/209 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              + G   +   LH G+      L      Q  G + I  M    +             
Sbjct: 8   PRVFSGIQPSGD-LHLGNYLG--ALKRFADAQDKGVQSIYCMVDLHA------------- 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +   Q+  +     + + + FI  G     ++++N        +   +   +     + R
Sbjct: 52  ITVWQDPADLKRSTRELCAGFIASGIDPDKSILINQSQVPEHAQLAWVFNCVARMGWMGR 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  ++      K  ++ S   F Y  L A D + +       +   G DQ  ++    D+
Sbjct: 112 MTQWKD--KAGKNAEAASLGLFAYPALMAADIL-IYHATHVPV---GEDQKQHLELTRDI 165

Query: 213 GERLKTP---KLFALTSPLLTTASGTKMG 238
             +         F LT P++  A+   M 
Sbjct: 166 AAKFNHDYGVDFFPLTEPVIEGAATRVMS 194


>gi|90018154|gb|ABD83890.1| tryptophanyl-tRNA synthetase [Ictalurus punctatus]
          Length = 239

 Score = 41.3 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 64/221 (28%), Gaps = 32/221 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            ++ ++H GHL   +   WLQ   + P+ +                    +   E     
Sbjct: 5   PSSEAMHMGHLIPFIFTKWLQDVFNVPLVI-------------------QLTDDEKYLWK 45

Query: 104 EKIKGIFSSFIKYGTGKTDAL--MLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFESVR 160
           +  +    SF         A    +N       + Y+ +      +   + + ++F  V+
Sbjct: 46  DLTQEQCYSFAVENAKDIIACGFDVNKTFIFSDLDYMGMSSSFYRNVVKIQKHVTFNQVK 105

Query: 161 SRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQM---GGSDQWGNIICGIDLG 213
                  S    + ++  +QA            N    LQ       DQ        D+ 
Sbjct: 106 GIFGFTDSDCIGKISFPAIQAAPSFSSSFPQIFNSRTDLQCLIPCAIDQDPYFRMTRDVA 165

Query: 214 ERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            R+  PK     +   P L  A         + +I+L    
Sbjct: 166 PRVGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTP 206


>gi|289423095|ref|ZP_06424910.1| hemolysin A [Peptostreptococcus anaerobius 653-L]
 gi|289156426|gb|EFD05076.1| hemolysin A [Peptostreptococcus anaerobius 653-L]
          Length = 292

 Score = 41.3 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           L+V  G+  S  +ARR + +  + +NN  +      +K+        I +  GK
Sbjct: 8   LLVDFGYFASREQARRTIMAGNVFVNNQRVDKPGTAVKI-----DSEILVK-GK 55


>gi|166032509|ref|ZP_02235338.1| hypothetical protein DORFOR_02224 [Dorea formicigenerans ATCC
           27755]
 gi|166026866|gb|EDR45623.1| hypothetical protein DORFOR_02224 [Dorea formicigenerans ATCC
           27755]
          Length = 353

 Score = 41.3 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLQERVKLQNSGDYDEIYIMIADAQAL---------TDNAEHPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI  +  +          K++  + +    L  + +  +     S    N  +  E  +
Sbjct: 61  QNIMNV-ALDYLACGIDPAKSNIFIQSMVPELTELTFYYMNLVTVSRVQRNPTVKAEIQQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFR----ATTVPVGEDQLPMLEQCKEIVHKFNSVY 173

Query: 221 LFALTSPLLTTASGTKM 237
              LT P +   S    
Sbjct: 174 GETLTEPDIILPSNKAC 190


>gi|303242311|ref|ZP_07328797.1| pseudouridine synthase [Acetivibrio cellulolyticus CD2]
 gi|302590150|gb|EFL59912.1| pseudouridine synthase [Acetivibrio cellulolyticus CD2]
          Length = 237

 Score = 41.3 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS-FGKKNHIIC 414
           I   G   S  +A   ++  ++K+N  ++S   +++   D        +    KK +I+ 
Sbjct: 10  IADCG-VASRRKAEELIQQGSVKVNGIVVSEMGIKVSSSDRVEVNGSVIKPESKKVYILL 68

Query: 415 H 415
           +
Sbjct: 69  N 69


>gi|312221335|emb|CBY01275.1| similar to tryptophanyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 492

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           LD+      +  Y G   ++ ++H GH        WLQ     P+ +M
Sbjct: 97  LDLYERGEDILLYTGRGPSSDAMHIGHTIPFEFTKWLQDVFDVPLVIM 144


>gi|227494659|ref|ZP_03924975.1| hypothetical protein HMPREF0044_0513 [Actinomyces coleocanis DSM
           15436]
 gi|226831841|gb|EEH64224.1| hypothetical protein HMPREF0044_0513 [Actinomyces coleocanis DSM
           15436]
          Length = 80

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M    I    V+  + L  L+  A       EAR  ++   + I++   +    Q++   
Sbjct: 1   MDNEEIPVITVTGTIRLGQLLKLANLVEDGGEARAAIQGGFVYIDDEQCTQRGKQLQDGQ 60

Query: 396 FDS 398
             S
Sbjct: 61  IVS 63


>gi|146304925|ref|YP_001192241.1| tryptophanyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703175|gb|ABP96317.1| tryptophanyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 381

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 80/293 (27%), Gaps = 37/293 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWL-QKTGHKPISLMGGGTSIIGD 83
           L    +      Y G    A SL  H GH+   +   WL QK G      +         
Sbjct: 65  LKDWKAGKGFFLYTGR---APSLGMHIGHMIPFIFTAWLQQKFGVNVYIEITD------- 114

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
               DE         + +  +         I  G       +  +  ++ ++  + +   
Sbjct: 115 ----DEKFMRNLDYTLDQTRQWALDNILDIIAAGFDPDKTFIFQDTEYIRNMYPLAI--- 167

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
                 + + L+F  V++    + S +     Y  LQ    +   +       +     W
Sbjct: 168 -----KIAKKLTFSEVKATFGLDVSSNIGIIFYPSLQIVPTMFEKRRCLIPAGIDQDPYW 222

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW-- 261
                  +     K  ++ +   P LT   G         AI+L+ +  +       +  
Sbjct: 223 RLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSSSIPESAIYLSDDPKTVERKIMKYAF 282

Query: 262 ----------RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
                     R +     +    +       E D   +  G+E    K +   
Sbjct: 283 SGGQPTIELQRKLGANLDIDVPYQWLYYFFEEDDERIRKIGEEYKSGKMLTGE 335


>gi|291446017|ref|ZP_06585407.1| tryptophanyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348964|gb|EFE75868.1| tryptophanyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 383

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 69/219 (31%), Gaps = 28/219 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ  G   I L+         P ++  + R    +  +  
Sbjct: 69  PTG-ALHLGHYFGSLRNRVRLQDLGVDVIVLI---------PDYQVITDRDTAERLAEYT 118

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              +    +  +     ++     +    L  +    L     +  + N  +  E   SR
Sbjct: 119 DGLLLDYLA--LGIDPARSTVFCHSAVPALNQLMLPFLSLVSVAELNRNPTVKDEIAHSR 176

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER------- 215
                 L      Y + QA D +    +    L   G DQ  ++     +  R       
Sbjct: 177 QSTVSGLML---TYPVHQAADIL----SCKGNLVPVGRDQAPHLEVTRTIARRFNERYGQ 229

Query: 216 -LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
               P +    +PLL    GTKM K+ + ++ L+     
Sbjct: 230 VFPEPDILLSAAPLLLGTDGTKMSKSRANSVPLSATADE 268


>gi|239942558|ref|ZP_04694495.1| putative tryptophanyl-tRNA synthetase [Streptomyces roseosporus
           NRRL 15998]
 gi|239989020|ref|ZP_04709684.1| putative tryptophanyl-tRNA synthetase [Streptomyces roseosporus
           NRRL 11379]
          Length = 345

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 69/219 (31%), Gaps = 28/219 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ  G   I L+         P ++  + R    +  +  
Sbjct: 31  PTG-ALHLGHYFGSLRNRVRLQDLGVDVIVLI---------PDYQVITDRDTAERLAEYT 80

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              +    +  +     ++     +    L  +    L     +  + N  +  E   SR
Sbjct: 81  DGLLLDYLA--LGIDPARSTVFCHSAVPALNQLMLPFLSLVSVAELNRNPTVKDEIAHSR 138

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER------- 215
                 L      Y + QA D +    +    L   G DQ  ++     +  R       
Sbjct: 139 QSTVSGLML---TYPVHQAADIL----SCKGNLVPVGRDQAPHLEVTRTIARRFNERYGQ 191

Query: 216 -LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
               P +    +PLL    GTKM K+ + ++ L+     
Sbjct: 192 VFPEPDILLSAAPLLLGTDGTKMSKSRANSVPLSATADE 230


>gi|189463697|ref|ZP_03012482.1| hypothetical protein BACINT_00028 [Bacteroides intestinalis DSM
           17393]
 gi|189438647|gb|EDV07632.1| hypothetical protein BACINT_00028 [Bacteroides intestinalis DSM
           17393]
          Length = 364

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 67/225 (29%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLRRRVELQNSGLYDKIFVFIADAQAL---------TDNVDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPEKSTIFIQSQIAELCELSFYFMNMVTVSRLQRNPTVKAEIQL 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                   + F  F Y I QA D               G DQ   +    ++  R     
Sbjct: 122 RNFDASIPVGF--FTYPISQAADITAFK----ATTVPVGEDQEPMLEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTS 253
              L  P +             T    KM K+L   I+L+     
Sbjct: 176 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADE 220


>gi|195328493|ref|XP_002030949.1| GM25723 [Drosophila sechellia]
 gi|194119892|gb|EDW41935.1| GM25723 [Drosophila sechellia]
          Length = 664

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 98/310 (31%), Gaps = 44/310 (14%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   S+     + G   T  SLH G+    +     LQ         +    SI      
Sbjct: 72  EEHNSRWPRKIFSGIQPTG-SLHLGNYLGAVRKWVELQNARDDVTVCIVDLHSIT----- 125

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                       ++ENI  +    ++ +  G   T + +          ++  +L  + +
Sbjct: 126 -----MPHNPPLLRENIFTM---AATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D   L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAADI-MLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLTT--------------ASGTKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T                   KM K  +          
Sbjct: 231 QLAQHLSRIYNGR--YGETFPVCTAIIEDGDASRVLSLQDPSKKMSKWEANPKATINLCD 288

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           SP    Q  +      V  F   +T  P   + +  +  +  +   ++ K +  E  T+ 
Sbjct: 289 SPDLITQKIK----KAVTDFTSDITYNPGKRAGVSNLVNIHAQVTGQSIKTVVNEAATLD 344

Query: 311 HGREEAEKAA 320
             + +   A 
Sbjct: 345 TAKYKDRVAE 354


>gi|161579488|ref|NP_294817.2| tryptophanyl-tRNA synthetase II [Deinococcus radiodurans R1]
          Length = 341

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 64/220 (29%), Gaps = 28/220 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GHL   +     LQ    +   L+    ++         +    R ++++EN
Sbjct: 21  PTG-ALHLGHLAGSLQNRVRLQDEA-ELFVLLADVQAL---------TDHFDRPEQVREN 69

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +  +  +          KT  ++ +    L  +    L     S    N  +  E  +  
Sbjct: 70  VLAV-ALDYLAAGLDPQKTTCVVQSAVPELAELTVYFLNLVTVSHLRQNPTVKAEIAQKG 128

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
                   F  F Y + QA D           L   G DQ   +    ++  R       
Sbjct: 129 YGERVPAGF--FVYPVSQAADIAAF----GATLVPVGDDQLPMLEQTREIVRRFNALYAP 182

Query: 218 ----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                    +    L       KM K+L  AI L      
Sbjct: 183 VLAEPQAQLSRVPRLPGLDGQAKMSKSLGNAIALGDSADE 222


>gi|73536116|pdb|2A4M|A Chain A, Structure Of Trprs Ii Bound To Atp
 gi|73536117|pdb|2A4M|B Chain B, Structure Of Trprs Ii Bound To Atp
 gi|73536118|pdb|2A4M|C Chain C, Structure Of Trprs Ii Bound To Atp
          Length = 331

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 64/220 (29%), Gaps = 28/220 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GHL   +     LQ    +   L+    ++         +    R ++++EN
Sbjct: 11  PTG-ALHLGHLAGSLQNRVRLQDEA-ELFVLLADVQAL---------TDHFDRPEQVREN 59

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +  +  +          KT  ++ +    L  +    L     S    N  +  E  +  
Sbjct: 60  VLAV-ALDYLAAGLDPQKTTCVVQSAVPELAELTVYFLNLVTVSHLRQNPTVKAEIAQKG 118

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
                   F  F Y + QA D           L   G DQ   +    ++  R       
Sbjct: 119 YGERVPAGF--FVYPVSQAADIAAF----GATLVPVGDDQLPMLEQTREIVRRFNALYAP 172

Query: 218 ----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                    +    L       KM K+L  AI L      
Sbjct: 173 VLAEPQAQLSRVPRLPGLDGQAKMSKSLGNAIALGDSADE 212


>gi|70606285|ref|YP_255155.1| tryptophanyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363446|sp|Q4JBG7|SYW_SULAC RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|68566933|gb|AAY79862.1| tryptophanyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 381

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 77/265 (29%), Gaps = 27/265 (10%)

Query: 6   SDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFW 62
           +D L ++  R       +    L+          Y G    A SL  H GHL   +   W
Sbjct: 43  NDELHVMLRRDVFFSHRDFDLILNDYEKGNGFFLYTGR---APSLGMHIGHLIPFIFTKW 99

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+   K    +      I D    DE         + +  E         I  G     
Sbjct: 100 LQEK-FKVNVYI-----EITD----DEKFLRNVDYTLDQTKEWSYENILDIIAVGFDPNK 149

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  +  ++ ++  + +         + + L+F  VR+    + S +     Y  LQ  
Sbjct: 150 TFIFQDTEYIKNMYPLSV--------KIAKKLTFNEVRATFGLDTSSNIGIIFYPALQIV 201

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
             +   +         G DQ        D+ E L   K   + S  L   +G +   + S
Sbjct: 202 PTMFEKRRCLIP---AGIDQDPYWRLQRDIAESLGYFKAAQIHSKFLPPLTGPEGKMSSS 258

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDA 267
                      P    +       +
Sbjct: 259 QPETAIYLTDDPKTVERKIMKYAFS 283


>gi|62903516|sp|Q9RVD6|SYW2_DEIRA RecName: Full=Tryptophanyl-tRNA synthetase 2; AltName:
           Full=Tryptophan--tRNA ligase II; Short=TrpRS II;
           AltName: Full=Tryptophanyl-tRNA synthetase II
 gi|61680678|pdb|1YI8|B Chain B, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
           Deinococcus Radiodurans In Complex With L-Trp
 gi|61680679|pdb|1YI8|A Chain A, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
           Deinococcus Radiodurans In Complex With L-Trp
 gi|61680680|pdb|1YI8|C Chain C, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
           Deinococcus Radiodurans In Complex With L-Trp
 gi|61680681|pdb|1YIA|B Chain B, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With 5-Hydroxy
           Tryptophan.
 gi|61680682|pdb|1YIA|A Chain A, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With 5-Hydroxy
           Tryptophan.
 gi|61680683|pdb|1YIA|C Chain C, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With 5-Hydroxy
           Tryptophan.
 gi|73535683|pdb|1YID|B Chain B, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With Atp.
 gi|73535684|pdb|1YID|A Chain A, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With Atp.
 gi|73535685|pdb|1YID|C Chain C, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With Atp.
 gi|6458825|gb|AAF10665.1|AE001959_5 tryptophanyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 351

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 64/220 (29%), Gaps = 28/220 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GHL   +     LQ    +   L+    ++         +    R ++++EN
Sbjct: 31  PTG-ALHLGHLAGSLQNRVRLQDEA-ELFVLLADVQAL---------TDHFDRPEQVREN 79

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +  +  +          KT  ++ +    L  +    L     S    N  +  E  +  
Sbjct: 80  VLAV-ALDYLAAGLDPQKTTCVVQSAVPELAELTVYFLNLVTVSHLRQNPTVKAEIAQKG 138

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
                   F  F Y + QA D           L   G DQ   +    ++  R       
Sbjct: 139 YGERVPAGF--FVYPVSQAADIAAF----GATLVPVGDDQLPMLEQTREIVRRFNALYAP 192

Query: 218 ----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                    +    L       KM K+L  AI L      
Sbjct: 193 VLAEPQAQLSRVPRLPGLDGQAKMSKSLGNAIALGDSADE 232


>gi|152974996|ref|YP_001374513.1| pseudouridine synthase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023748|gb|ABS21518.1| pseudouridine synthase [Bacillus cytotoxicus NVH 391-98]
          Length = 242

 Score = 41.3 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I++    ++  QD     +I L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVTELGTKVTPQDKVEVNHIPL 55


>gi|319784272|ref|YP_004143748.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170160|gb|ADV13698.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 670

 Score = 41.3 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +   + +AG A S  +A   + +  +K+N   +++    +   D   
Sbjct: 224 IAKRLARAGLA-SRRDAEELIAAGRVKVNGRALTSPAFNVMPDDIIH 269


>gi|304388352|ref|ZP_07370465.1| S4 RNA-binding domain protein [Neisseria meningitidis ATCC 13091]
 gi|304337669|gb|EFM03825.1| S4 RNA-binding domain protein [Neisseria meningitidis ATCC 13091]
          Length = 118

 Score = 41.3 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 8/73 (10%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           +                 +      ++   ++  ++ +  + L  L+  AG A S  +A+
Sbjct: 15  MCCLFCGNFGYGGGRCYNNGLFLQGNIMEATVYLED-NEYIALCDLLKLAGLAESGGQAK 73

Query: 370 RHLKSNAIKINNS 382
             +    +  N  
Sbjct: 74  ALIAEGLVSRNGE 86


>gi|161869392|ref|YP_001598559.1| hypothetical protein NMCC_0399 [Neisseria meningitidis 053442]
 gi|161594945|gb|ABX72605.1| conserved hypothetical protein [Neisseria meningitidis 053442]
 gi|254673557|emb|CBA09031.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
          Length = 104

 Score = 41.3 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 8/73 (10%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           +                 +      ++   ++  ++ +  + L  L+  AG A S  +A+
Sbjct: 1   MCCLFCGNFGYGGGRCYNNGLFLQGNIMEATVYLED-NEYIALCDLLKLAGLAESGGQAK 59

Query: 370 RHLKSNAIKINNS 382
             +    +  N  
Sbjct: 60  ALIAEGLVSRNGE 72


>gi|221310234|ref|ZP_03592081.1| pseudouridine synthase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 245

 Score = 41.3 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           EV     L  +I  AG   S  +A   +K   +K+N  +++   +++   D      +K+
Sbjct: 13  EVKDMERLQKVIAHAG-VASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKV 71


>gi|302670616|ref|YP_003830576.1| tryptophanyl-tRNA synthetase TrpS [Butyrivibrio proteoclasticus
           B316]
 gi|302395089|gb|ADL33994.1| tryptophanyl-tRNA synthetase TrpS [Butyrivibrio proteoclasticus
           B316]
          Length = 364

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 72/235 (30%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++++
Sbjct: 11  PTGK-LHVGHYVGSLRRRVELQNSGEFDKIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +    +     K+   + +    L  + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYLSVGLDPAKSTLFIQSQIPELTELSFYYMNLVTVSRLQRNPTVKSEIAM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  +  +  
Sbjct: 120 RNFETSIPVGF--FTYPISQAADITAFK----ATTVPVGEDQEPMIEQCKEIVRKFNSVY 173

Query: 221 LFALTSPLLTT------------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             AL  P +                  KM K+L   I+L++E  S          
Sbjct: 174 GEALVEPEILLPDNAACLRLPGIDGKAKMSKSLGNCIYLSEEPESIKKKVMSMFT 228


>gi|282897968|ref|ZP_06305963.1| RNA-binding S4 [Raphidiopsis brookii D9]
 gi|281197112|gb|EFA72013.1| RNA-binding S4 [Raphidiopsis brookii D9]
          Length = 259

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 8/127 (6%)

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             A+ I+  E+   +    +  ++     +  D S      P        V   + L   
Sbjct: 131 RGAQAIVVPELAEFLTMNLQQVRSVPVKTQVIDPSELKIREPKKK-ELTTVEASLRL-DA 188

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG-----KK 409
           I  AGF  S ++    + S  +++N   I+    Q+K+ D  +  G  +L  G     KK
Sbjct: 189 IASAGFGMSRSKMVDLIDSGDVRVNWKEITQSSYQLKMGDLIAIRGKGRLQVGEIAVTKK 248

Query: 410 NHIICHL 416
           +     L
Sbjct: 249 DRYRIQL 255


>gi|302382935|ref|YP_003818758.1| hemolysin A [Brevundimonas subvibrioides ATCC 15264]
 gi|302193563|gb|ADL01135.1| hemolysin A [Brevundimonas subvibrioides ATCC 15264]
          Length = 241

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 32/82 (39%), Gaps = 18/82 (21%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS------NEKLQIK---LQDFDSTG 400
           M L  L+V  G   S   A+  +++  + ++  +++      ++   +      D+   G
Sbjct: 1   MRLDQLLVSKGLIDSRARAKAAIQAGGVTVDGIVVTNAARAFDDDAIVTVTQAHDWVGRG 60

Query: 401 NIKLSFGKKNHII----CHLCG 418
            +KL     +H +      + G
Sbjct: 61  ALKL-----DHALTLWPVEVAG 77


>gi|50303139|ref|XP_451507.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640638|emb|CAH03095.1| KLLA0A11660p [Kluyveromyces lactis]
          Length = 482

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG-NIKLSF-GKKN 410
            + +A FA+S  +AR+ +    + +N   I++    +K  D  +      L   G K 
Sbjct: 108 ALFRAMFASSVRQARQFILHGNVHVNGVKITSPGYALKAGDVFNVRPEKVLQALGAKK 165


>gi|167749348|ref|ZP_02421475.1| hypothetical protein EUBSIR_00300 [Eubacterium siraeum DSM 15702]
 gi|167657688|gb|EDS01818.1| hypothetical protein EUBSIR_00300 [Eubacterium siraeum DSM 15702]
          Length = 347

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 40/331 (12%), Positives = 98/331 (29%), Gaps = 36/331 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHIGHYVGSLRRRVQLQNTGDFDEIYIMIADAQAL---------TDNFDNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            NI ++  +          K+   + +    L  + +  +     S    N  +  E   
Sbjct: 61  SNIGEV-ALDYMAAGLDPEKSTIFIQSMIPELTELTFYYMNLVTVSRLQRNPTVKAEITM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--T 218
              +      F    Y I Q  D               G DQ   +    ++  +     
Sbjct: 120 RNFEASIPAGF--LCYPISQTADITAFK----ATTVPVGEDQLPMLEQAKEIVHKFNSIY 173

Query: 219 PKLFALTSPLLT----------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
             +      LL           T    KM K+L   I+L     SP +      ++    
Sbjct: 174 EPVLVEPEILLPENEACMRLPGTDGKAKMSKSLGNCIYLA---DSPADIKAKIMSMFTDP 230

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           +         +  + +         + +  + +   +    +    +        ++ F 
Sbjct: 231 LHIQVSDPGHIEGNTVFTYLDAFCTDEHFERYLPDYKNLDELKEHYKRGGLGDMKIKKFL 290

Query: 329 MSIHSQHMPTISISKDEVSRGMG-LLTLIVK 358
            ++  + +  I + ++E+++ M  +  ++ K
Sbjct: 291 NNVMQEELEPIRLRREELAKNMDYVYDVLKK 321


>gi|239979875|ref|ZP_04702399.1| tryptophanyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 330

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 68/235 (28%), Gaps = 31/235 (13%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ+T H    ++    + I  P    E R   R    
Sbjct: 4   GIQPTAGSFHLGNYLGAVRQWVALQET-HDAFYMVVDLHA-ITVPQDPAELRANTRLAAA 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q     +     +          A +            ++ L   G    + +       
Sbjct: 62  QLLAAGLDPERCTLFVQSQVPEHAQLGW---------VMNCLTGFGEASRMTQFKD---- 108

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +S  +     +   F Y +L   D + L +     +   G DQ  ++     L ER    
Sbjct: 109 KSAKQGNDRTTVGLFTYPMLMVADIL-LYQADQVPV---GEDQRQHLELTRTLAERFNGT 164

Query: 220 KLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                T P   +   +           KM K+ +    L   +  P    +  ++
Sbjct: 165 YGETFTVPGAYILKETAKIYDLQDPTAKMSKSAANPKGLINLLDEPKATMKKIKS 219


>gi|254409976|ref|ZP_05023756.1| hemolysin A [Microcoleus chthonoplastes PCC 7420]
 gi|196183012|gb|EDX77996.1| hemolysin A [Microcoleus chthonoplastes PCC 7420]
          Length = 281

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI--KLQDFDSTGNIKLSFG 407
           L+V      S  +A+R + +  +++N  ++     +I    +   +  +  +S G
Sbjct: 8   LLVDLNLCESRQQAQRLILAGEVRVNQQLVDKPGTEIETTAEIKINQKSPYVSRG 62


>gi|73666743|ref|YP_302759.1| tryptophanyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|72393884|gb|AAZ68161.1| tryptophanyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 333

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 74/203 (36%), Gaps = 26/203 (12%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T  S+H G+    +     LQ + +K    +    ++         + +     E+
Sbjct: 9   GIQPTG-SIHLGNYLGSIRNWVSLQNS-YKCFFFLADLHTL---------TSQSYNPAEL 57

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N        ++++  G     +++    +     + + +L  I S   +NRM      
Sbjct: 58  KQN---SINTLATYLACGIDPNKSVLFIQSSINAHSELLWILSCITSTGQLNRMTQ---F 111

Query: 160 RSRLKREQSLSFLE-FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG---ER 215
           + + + + S S L  ++Y +L A D +     Y   +   G DQ  ++    D+      
Sbjct: 112 KEKSRNKASASCLGLYSYPVLMAADIL----IYKANIVPVGVDQKQHLELTRDIAISFNS 167

Query: 216 LKTPKLFALTSPLLTTASGTKMG 238
               + F +  PL+   S   M 
Sbjct: 168 TYNTQYFQIPEPLIVQESAKIMS 190


>gi|320528363|ref|ZP_08029525.1| tryptophan--tRNA ligase [Solobacterium moorei F0204]
 gi|320131277|gb|EFW23845.1| tryptophan--tRNA ligase [Solobacterium moorei F0204]
          Length = 329

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 26/204 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   LH G+      L      +  ++  + +                  +   Q 
Sbjct: 7   GIKPTGQ-LHLGNYIG--ALRHFVESQNEYEMFAFIANLH-------------CITVPQN 50

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            QE  + +K   + ++  G     A +          +   ++        +NRM  F+ 
Sbjct: 51  PQELQKNLKDCVALYLACGLDPNKATIFLQTDVKEHAQLGFIMCCHTYMGELNRMTQFKD 110

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
              + K E++LS   + Y  L A D + L       +   G DQ  ++    D+ ER+  
Sbjct: 111 --KQAKGEKNLSGGLYTYPALMAADIL-LYSPDYVPV---GEDQKQHVELTRDVAERMNN 164

Query: 218 -TPKLFALTSPLLTTASGTKMGKT 240
              +LF +  PL+       M  +
Sbjct: 165 RYGQLFTVPEPLVAKVGARIMSLS 188


>gi|224536170|ref|ZP_03676709.1| hypothetical protein BACCELL_01036 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522210|gb|EEF91315.1| hypothetical protein BACCELL_01036 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 364

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 67/235 (28%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  +   ++++
Sbjct: 13  PTGR-LHIGHYVGSLRRRVELQNSGLYDKIFVFIADAQAL---------TDNVDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLACGLDPAKSTIFIQSQIAELCELSFYFMNMVTVSRLQRNPTVKAEIQL 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                   + F  F Y I Q  D               G DQ   +    ++  R     
Sbjct: 122 RNFDASIPVGF--FTYPISQTADIAAFK----ATTVPVGEDQEPMLEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 176 GETLVEPEILLPENAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVQKKVKGMYT 230


>gi|90961200|ref|YP_535116.1| tryptophanyl-tRNA synthetase II [Lactobacillus salivarius UCC118]
 gi|227891860|ref|ZP_04009665.1| tryptophanyl-tRNA synthetase II [Lactobacillus salivarius ATCC
           11741]
 gi|90820394|gb|ABD99033.1| Tryptophanyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227866323|gb|EEJ73744.1| tryptophanyl-tRNA synthetase II [Lactobacillus salivarius ATCC
           11741]
 gi|300214126|gb|ADJ78542.1| Tryptophanyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 339

 Score = 41.3 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 65/225 (28%), Gaps = 34/225 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G +    ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHVGHYIGSLKKRVSMQNSGKYDSYIMIADQQAL------TDNARDPEKIKNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 65  QVALDY----LAVGLDPKKSTIFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---- 217
             +R     F  F Y + QA D           L   G DQ   +    ++         
Sbjct: 121 HFERSIPAGF--FTYPVSQAADITAFK----ANLVPVGDDQEPMLEQTREIVRTFNSIYG 174

Query: 218 ---TPKLFALTS------PLLTTASGTKMGKTLSGAIWLNKEMTS 253
                             P L      KM K+L+ AI+L+ +  +
Sbjct: 175 EVLVEPQGVFAPKGSGRLPGL--DGNAKMSKSLNNAIYLSDDADT 217


>gi|326381942|ref|ZP_08203635.1| tryptophanyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199368|gb|EGD56549.1| tryptophanyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 339

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 72/255 (28%), Gaps = 39/255 (15%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTS 79
           +++P     + S        G   T+ S H G+    +     LQ         +    +
Sbjct: 1   MTSPEPRRRVLS--------GIQPTSDSFHLGNYLGAVRQWVQLQDE-FDAFYFIPDMHA 51

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            I  P      R            E+ +   +  +  G     A +          +   
Sbjct: 52  -ITVPQDPKVLR------------ERTRRSVAQLLAVGVDPERATIYVQSHVPEIAQLTW 98

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  +  F   +RM  F+  +S      +     F Y IL A D +             G
Sbjct: 99  VLTCLTGFGEASRMTQFKD-KSAKSGTDAAGVGLFTYPILMAADILAFQ----VDSVPVG 153

Query: 200 SDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLN 248
            DQ  ++    DL +R      K   +  P +               KM K+      L 
Sbjct: 154 EDQRQHLELTRDLAQRFNKRYGKALTVPKPYIVEEFAKIYDLQNPTAKMSKSADSDAGLI 213

Query: 249 KEMTSPYNFWQYWRN 263
             +  P    +  R+
Sbjct: 214 NLLDEPKRSAKKIRS 228


>gi|239613660|gb|EEQ90647.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis ER-3]
          Length = 498

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 43/116 (37%), Gaps = 2/116 (1%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  +   +       E A   +         +   P + 
Sbjct: 58  HGEQVRESQWEKMFSRRLRSVVPMDANYLARNDGSFESAGRGSGVEGVGPRKAPLTPHMQ 117

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           ++   + R + +   I +A FA+ST +AR+ +    + +N + + +    +   D 
Sbjct: 118 MTFAPLERRLDV--AIFRAMFASSTRQARQFVVHGFVTVNGTKMRHPGYLLNPGDL 171


>gi|261193076|ref|XP_002622944.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis SLH14081]
 gi|239589079|gb|EEQ71722.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis SLH14081]
 gi|327352581|gb|EGE81438.1| 30S ribosomal subunit S4 [Ajellomyces dermatitidis ATCC 18188]
          Length = 498

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 43/116 (37%), Gaps = 2/116 (1%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E  R ++ +       + ++  +   +       E A   +         +   P + 
Sbjct: 58  HGEQVRESQWEKMFSRRLRSVVPMDANYLARNDGSFESAGRGSGVEGVGPRKAPLTPHMQ 117

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           ++   + R + +   I +A FA+ST +AR+ +    + +N + + +    +   D 
Sbjct: 118 MTFAPLERRLDV--AIFRAMFASSTRQARQFVVHGFVTVNGTKMRHPGYLLNPGDL 171


>gi|225389033|ref|ZP_03758757.1| hypothetical protein CLOSTASPAR_02778 [Clostridium asparagiforme
           DSM 15981]
 gi|225044908|gb|EEG55154.1| hypothetical protein CLOSTASPAR_02778 [Clostridium asparagiforme
           DSM 15981]
          Length = 366

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 59/199 (29%), Gaps = 24/199 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 14  PTGR-LHVGHYVGSLKRRVELQNSGEFDEIYIMIADAQAL---------TDNADNPEKVR 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G     +++        LC + +  +     S    N  +  E 
Sbjct: 64  QNI---IEVALDYLACGLDPEKSVLFIQSQIPELCEMTFYYMDLVTVSRLQRNPTVKSEI 120

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   I    ++  +  +
Sbjct: 121 QMRNFEASIPVGF--FTYPISQAADITAFK----ATTVPVGEDQAPMIEQTREIVHKFNS 174

Query: 219 PKLFALTSPLLTTASGTKM 237
                L  P +        
Sbjct: 175 VYGETLVEPDILLPDNKAC 193


>gi|297583839|ref|YP_003699619.1| tryptophanyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142296|gb|ADH99053.1| tryptophanyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 329

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 68/241 (28%), Gaps = 38/241 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMM 94
             + G   + + L  G+    M           H+    +    + I  P  + E R+ +
Sbjct: 3   RIFSGIQPSGT-LTLGNYLGAMT--HFVDLQEDHESFFCIVDQHA-ITVPQDKLELRKNI 58

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRM 153
            S              + ++  G     A +         +     L  +    S +  +
Sbjct: 59  LSL------------AALYVAVGLDPKKATLFIQSE----VPAHAQLGWMMQCVSYIGEL 102

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   ++++S     Y  L A D +     Y   +   G DQ  ++    DL 
Sbjct: 103 ERMTQFKDKSDGKEAVSSALLTYPPLMAADIL----LYKTDIVPVGEDQKQHLELTRDLA 158

Query: 214 ERLKTPKLFALTSPLL-----------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           ER         T P +            T    KM K+          +  P    +  +
Sbjct: 159 ERFNHKYNDIFTIPEVRIPKQGARIMSLTDPTKKMSKSNPNPKSYISMLDEPNTIRKKIK 218

Query: 263 N 263
           +
Sbjct: 219 S 219


>gi|90420290|ref|ZP_01228198.1| RNA-binding S4 domain protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90335624|gb|EAS49374.1| RNA-binding S4 domain protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 143

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD----STGNIKL 404
           G  +   +  A    S + A++ +++  ++IN     N    ++  D          + L
Sbjct: 17  GQRIDKWLFFARVVKSRSLAQKLVQAGGVRINGDKTDNAARAVRPGDTLTIARRDEILVL 76

Query: 405 SF 406
             
Sbjct: 77  KI 78


>gi|50292421|ref|XP_448643.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527955|emb|CAG61606.1| unnamed protein product [Candida glabrata]
          Length = 484

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSF-GKKN 410
           FA+S  +AR+ +    + +N   I +    +K  D F+      L   G K 
Sbjct: 114 FASSVRQARQFILHGNVYVNGVKIKHPGYTLKPGDTFNVKPEKVLQALGSKK 165


>gi|149193898|ref|ZP_01870996.1| Hemolysin A [Caminibacter mediatlanticus TB-2]
 gi|149135851|gb|EDM24329.1| Hemolysin A [Caminibacter mediatlanticus TB-2]
          Length = 238

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           M L   +VK     + ++A+  +K+  +K+N+ II     +IK  D        L  
Sbjct: 1   MRLDEALVKRDLVETRSKAKELIKNEKVKVNDKIIKKPSFEIKDNDKIE----ILQK 53


>gi|159036398|ref|YP_001535651.1| tryptophanyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157915233|gb|ABV96660.1| tryptophanyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 341

 Score = 41.3 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 28/201 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIG--DPSFRDESRRMMRS 96
           G   TA S H G+    +   W  LQ T H     +    +I    DP    +  R+  +
Sbjct: 13  GIQPTADSFHLGNYLGAVG-HWVALQDT-HDAFYCVVDLHAITAGHDPRMLAQRSRIAAA 70

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           Q +   ++  +       +       A       W        +L  I  F    RM  F
Sbjct: 71  QLLAVGLDPERCTLFVQSQVPEHAQLA-------W--------VLGCITGFGEAGRMTQF 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +  +S+ +  +  S   F Y +LQA D + L +     +   G DQ  ++    DL +R 
Sbjct: 116 KD-KSQRQGNERASVGLFTYPVLQAADIL-LYQADAVPV---GEDQRQHLELSRDLAQRF 170

Query: 217 K--TPKLFALTSPLLTTASGT 235
                  F +    +   +  
Sbjct: 171 NTLFGPTFTVPEAHIVKDTAK 191


>gi|299782727|gb|ADJ40725.1| Tryptophan--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 337

 Score = 41.3 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q++G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYVGSLRERVKMQESGEYDPFIMIADQQAL------TDNARDPEKIRRSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 65  EVALDY----LAVXLDPAKSTLFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              R     F  F Y + Q  D           L   G DQ   +    ++  
Sbjct: 121 NFNRSIPAGF--FTYPVSQTADITAFK----ANLVPVGDDQEPMLEQAREIVR 167


>gi|282863847|ref|ZP_06272905.1| tryptophanyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282561548|gb|EFB67092.1| tryptophanyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 352

 Score = 41.3 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 67/221 (30%), Gaps = 32/221 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ  G     L+     +                   +  
Sbjct: 38  PTG-ALHLGHYFGTLRNRVRLQDLGVDVFVLIADYQVL-------------TDRDIAERL 83

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
            E ++G+   ++  G       + N+           LL    S  SV  +    +V+  
Sbjct: 84  SEHVEGLLLDYLAIGIDPARTTVFNHS---AVPALNQLLLPFLSLVSVAELGRNPTVKDE 140

Query: 163 --LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
               R+ ++S L + Y + QA D +         L   G DQ  ++     +  R     
Sbjct: 141 IAHSRQAAVSGLMYTYPVHQAADIL----FCKGNLVPVGQDQLPHLEVTRTVARRFNERY 196

Query: 221 LFALTSP--------LLTTASGTKMGKTLSGAIWLNKEMTS 253
                 P        LL    GTKM K+   ++ L      
Sbjct: 197 GAVFPEPDALLSAAPLLLGTDGTKMSKSRHNSVALGASEDE 237


>gi|193216644|ref|YP_001999886.1| ribosomal large subunit pseudouridine synthase B [Mycoplasma
           arthritidis 158L3-1]
 gi|193001967|gb|ACF07182.1| ribosomal large subunit pseudouridine synthase B [Mycoplasma
           arthritidis 158L3-1]
          Length = 251

 Score = 41.3 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 14/79 (17%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +KDE  + + +   I + G+  S  +A   +K   IKIN+ + +  +  +          
Sbjct: 4   TKDEFEKTIKIQKAISQVGYC-SRRQAEELIKQKRIKINHQVATLGQRVLADDQIFID-- 60

Query: 402 IKLSFGKK------NHIIC 414
                GKK         + 
Sbjct: 61  -----GKKLNIKPPKFYLV 74


>gi|262195687|ref|YP_003266896.1| pseudouridine synthase [Haliangium ochraceum DSM 14365]
 gi|262079034|gb|ACY15003.1| pseudouridine synthase, RluA family [Haliangium ochraceum DSM
           14365]
          Length = 322

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 18/39 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
             +     A S ++ +R +   A++++ + +     +++
Sbjct: 27  QFLTACELALSRSQVKRLIDEGAVQVDGAEVRKPGFKLQ 65


>gi|206900201|ref|YP_002250765.1| hemolysin A [Dictyoglomus thermophilum H-6-12]
 gi|206739304|gb|ACI18362.1| hemolysin A [Dictyoglomus thermophilum H-6-12]
          Length = 271

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK--LSFG----K 408
           L+VK GF  S  +A+  + +  +K+N +I++   L+I +            +S G    K
Sbjct: 10  LLVKRGFFESREKAKAAIIAGVVKVNGNIVTKPDLKIPVDSLIEIKETIPYVSKGGFKLK 69

Query: 409 K 409
           K
Sbjct: 70  K 70


>gi|75765038|ref|ZP_00744346.1| Ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74487472|gb|EAO51380.1| Ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 100

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|190890624|ref|YP_001977166.1| hemolysin protein [Rhizobium etli CIAT 652]
 gi|190695903|gb|ACE89988.1| hemolysin protein [Rhizobium etli CIAT 652]
          Length = 248

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                L  L+V  G   S + AR  ++   ++I   +++     I 
Sbjct: 4   QNSQRLDQLLVSRGLFASRSRARDAVQRGTVRIGGQLVTKAGALIS 49


>gi|154491797|ref|ZP_02031423.1| hypothetical protein PARMER_01414 [Parabacteroides merdae ATCC
           43184]
 gi|154088038|gb|EDN87083.1| hypothetical protein PARMER_01414 [Parabacteroides merdae ATCC
           43184]
          Length = 249

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++   +++N  I++    +I  QD
Sbjct: 8   ADPNEPIRLNKFLSNAGVC-SRREADEFIQEGVVQVNGQIVTELGTKITRQD 58


>gi|157869606|ref|XP_001683354.1| tryptophanyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68126419|emb|CAJ04019.1| putative tryptophanyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 412

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 55/167 (32%), Gaps = 18/167 (10%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     + +     +   +  V  Y G   +A ++H GH+   ML  +LQ     P+ + 
Sbjct: 79  RDLHKALVDIEA-SVKTGERSVFLYTGRGPSAGTMHLGHVLPFMLTKYLQDVFSLPLVI- 136

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
                 I D   +   R +       +  E I+      I +        +  N  ++  
Sbjct: 137 -----QITD-DEKFLFRDVPFEGAKAD--ELIRSNIKDIIAFNFNPRHTFIFRNTHYMGD 188

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           +          +   + R ++  +V+  L    S +  +  +   QA
Sbjct: 189 MYP--------TVLRLQRSMTGNAVKHTLGITDSDNVGKLAFPATQA 227


>gi|57238843|ref|YP_179979.1| tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57160922|emb|CAH57827.1| tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 332

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 80/245 (32%), Gaps = 33/245 (13%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T  S+H G+    +     LQ + +K    +    ++         +       E+
Sbjct: 9   GIQPTG-SIHLGNYLGFIRNGVSLQNS-YKCFFFLADLHTL---------TSETYNPDEL 57

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N        ++++  G    ++++ +        + + +   I S   +NRM  F+  
Sbjct: 58  KKN---SINTLATYLACGIDPENSVLFSQSFIPAHTELLWIFSCITSTGQLNRMTQFK-- 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
                +  + S   ++Y +L A D +     Y   +   G DQ  ++    D+ +   T 
Sbjct: 113 EKSRNKVSTASLGLYSYPVLMAADIL----LYQANIVPVGIDQKQHLELARDIAQAFNTK 168

Query: 220 ---KLFALTSPLL---------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
              + F L  PL+               KM K+            S     Q        
Sbjct: 169 YNTQYFQLPEPLIVQESAKIMSLRDGKKKMSKSDVSDYSRINLEDSNDLIAQKINKATTD 228

Query: 268 DVVSF 272
            +V F
Sbjct: 229 SIVGF 233


>gi|410137|gb|AAA67493.1| ORFX13 [Bacillus subtilis subsp. subtilis str. 168]
          Length = 229

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S ++A   +K   +K+N  +++   +++   D      +K+
Sbjct: 4   LQKVIAHAG-VASRSKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKV 55


>gi|330991270|ref|ZP_08315221.1| Putative RNA pseudouridine synthase [Gluconacetobacter sp. SXCC-1]
 gi|329761289|gb|EGG77782.1| Putative RNA pseudouridine synthase [Gluconacetobacter sp. SXCC-1]
          Length = 259

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           S     RG  +   + ++G   S  +A R +    +++N +++++    +   D      
Sbjct: 7   SSASAERGDRIAKWLARSG-VASRRDAERMIAEGRVQLNGAVVNHPATFVGAGDIVQVNG 65

Query: 402 IKL 404
             +
Sbjct: 66  SVV 68


>gi|254473658|ref|ZP_05087054.1| pseudouridylate synthase, subunit B protein [Pseudovibrio sp.
           JE062]
 gi|211957370|gb|EEA92574.1| pseudouridylate synthase, subunit B protein [Pseudovibrio sp.
           JE062]
          Length = 681

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  +   + +AG   S  EA   +++  + +N +++      +  +D
Sbjct: 36  GERIAKAMARAGLC-SRREAETWIEAGRVSVNGNVLDTPAFTVTQKD 81


>gi|295100369|emb|CBK97914.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Faecalibacterium prausnitzii L2-6]
          Length = 849

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 44/371 (11%), Positives = 104/371 (28%), Gaps = 46/371 (12%)

Query: 23  NPRELDILCSQGVVTAYIGYD---LTASSLHAGH-----LTQLMLLFWLQKTGHKPISLM 74
           + +             Y   +    + + LH GH        ++     Q  G+  +  M
Sbjct: 18  DEKTFHAEIDHKKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQN-GYNVLYPM 76

Query: 75  G-GGTSIIGDPSFR-DESRRMMRSQEIQENIEKIKGI-----FSSFIKYGTGKTDALMLN 127
           G     +   P+        +  +   ++N++  +       FS         TD     
Sbjct: 77  GWDAFGL---PTENFAMKNHIHPAIVTKKNVDHFREQLKALGFSFDWDREINTTDPEYYK 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              W+  ++            +VN     + V +  +    +     + ++ +      L
Sbjct: 134 WTQWIF-LQLYKKGLAYKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHRVKSQWML 192

Query: 188 AKNYDCRLQMGGSD---------QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
                    + G D                G   G  +        T  + TT   T  G
Sbjct: 193 KITAYADKLIDGLDGLDYIERVATQQKNWIGRSHGAEVNFGTTAGDTLTVYTTRCDTLFG 252

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
            T    + ++ E      + +     +   V ++         +E  R +  +  E+N+ 
Sbjct: 253 AT---YMVVSPEHAILKEWLEKGIIKNADAVKAY--------QAEAARKSDFERSELNKE 301

Query: 299 KKIIATEITTMVHGREEAEKAATAAMEC--FDMSIHSQHMPTISISKDEVSR--GMGLLT 354
           K  +  E    ++   + E     +        +     +P       E ++  G+ ++ 
Sbjct: 302 KTGVQLEGVMGINPVNDKEIPIFISDYVLATYGTGAIMAVPAHDTRDWEFAKKFGLPIIE 361

Query: 355 LIVKAGFATST 365
           ++   G   S 
Sbjct: 362 VVK--GSTPSN 370


>gi|254479483|ref|ZP_05092808.1| tryptophanyl-tRNA synthetase [Carboxydibrachium pacificum DSM
           12653]
 gi|214034587|gb|EEB75336.1| tryptophanyl-tRNA synthetase [Carboxydibrachium pacificum DSM
           12653]
          Length = 329

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 72/258 (27%), Gaps = 33/258 (12%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             + G   +   +H G+      +      Q   +     +    ++             
Sbjct: 5   RVFSGVQPSGD-IHIGNYLG--AMRQFVALQD-DYDCFFCVVDLHALT----------VP 50

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNR 152
               E+++N      + + ++  G       +         +     L  +    +    
Sbjct: 51  QDPVELKKN---TIELAALYMAIGLDPKKVTLFVQS----HVSAHAELAWLLQCITYFGE 103

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +      + + K ++S+S   F Y  L A D + L K +   +   G DQ  ++    D+
Sbjct: 104 LSRMTQFKEKSKGKESVSVGLFTYPDLMAADIL-LYKTHYVPV---GEDQKQHLELTRDV 159

Query: 213 GERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
            +R      + F +  P++       M  T         +  +  N      +  D    
Sbjct: 160 AQRFNNRFGETFVIPEPMILKFGARIMSLT--NPTKKMSKSDADPNNRVNLLDDPDTIYR 217

Query: 271 SFAKRLTTLPMSEIDRMA 288
              K +T           
Sbjct: 218 KIMKAVTDSESEIRLDWE 235


>gi|209879744|ref|XP_002141312.1| tryptophanyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209556918|gb|EEA06963.1| tryptophanyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 598

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           L+   +  +   Y G   ++ +LH GHL  L+   +LQ     P+ +
Sbjct: 271 LNAYEAGKLFYLYTGRGPSSEALHIGHLIPLLFTKYLQDVFKVPLVI 317


>gi|15823695|dbj|BAB69032.1| tryptophanyl-tRNA synthetase [Encephalitozoon hellem]
          Length = 111

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG +    +   L D +        Y G   +  ++H GH+   +L  ++Q 
Sbjct: 59  RGIVFAHRDFNLLLDEISKGKAFYLYTGRGPSTKAMHIGHVVPFLLCKYIQD 110


>gi|20807900|ref|NP_623071.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|25009428|sp|Q8R9X8|SYW_THETN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|20516467|gb|AAM24675.1| Tryptophanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 327

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 72/258 (27%), Gaps = 33/258 (12%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             + G   +   +H G+      +      Q   +     +    ++             
Sbjct: 3   RVFSGVQPSGD-IHIGNYLG--AMRQFVALQD-DYDCFFCVVDLHALT----------VP 48

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNR 152
               E+++N      + + ++  G       +         +     L  +    +    
Sbjct: 49  QDPVELKKN---TIELAALYMAIGLDPKKVTLFVQS----HVSAHAELAWLLQCITYFGE 101

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +      + + K ++S+S   F Y  L A D + L K +   +   G DQ  ++    D+
Sbjct: 102 LSRMTQFKEKSKGKESVSVGLFTYPDLMAADIL-LYKTHYVPV---GEDQKQHLELTRDV 157

Query: 213 GERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
            +R      + F +  P++       M  T         +  +  N      +  D    
Sbjct: 158 AQRFNNRFGETFVIPEPMILKFGARIMSLT--NPTKKMSKSDADPNNRVNLLDDPDTIYR 215

Query: 271 SFAKRLTTLPMSEIDRMA 288
              K +T           
Sbjct: 216 KIMKAVTDSESEIRLDWE 233


>gi|325971145|ref|YP_004247336.1| tryptophanyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026383|gb|ADY13142.1| tryptophanyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 330

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 41/329 (12%), Positives = 87/329 (26%), Gaps = 46/329 (13%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDE 89
             Q       G D T   LH GH    +     LQ + +    L+    ++         
Sbjct: 1   MEQNKKRILTG-DRTTGRLHLGHYVGSLKSRVELQDS-YDTFILLADVQAL--------- 49

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                       N         + +  G        +            +L        +
Sbjct: 50  --TTHFEHPELINSSIYDVTMDN-LAVGLDPAKVTFVQQSQIT---SIAELTVFYSMIVT 103

Query: 150 VNRMLSFESVRS--RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           VN++    ++++  +      L++    Y + Q  D        +  L   G DQ  +I 
Sbjct: 104 VNQLRHNPTIKTEAKNYGYADLTYGFLGYPVSQTADIT----FCNANLVPVGEDQVPHIE 159

Query: 208 CGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
               +  +       ++  P         L       KMGK+L  AI+L+    + ++  
Sbjct: 160 LARKIVRKFNDLYGTSIVEPEAKLSAVGRLSGLDGNAKMGKSLGNAIYLSDTPETVWDRV 219

Query: 259 QYWR------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           +               + +  +V  +          +I    +         KK +  E+
Sbjct: 220 RNAVTDPARITIKIPGHPEICNVYKYHCVFNPDEKDDIADRCRNAQIGCVACKKRL-NEV 278

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH 335
              +       +A           +  + 
Sbjct: 279 LNSLLDPIRERRAYYEGHREQVRELIIEG 307


>gi|268319699|ref|YP_003293355.1| hypothetical protein FI9785_1227 [Lactobacillus johnsonii FI9785]
 gi|262398074|emb|CAX67088.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
           johnsonii FI9785]
          Length = 265

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 19/136 (13%)

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
            D     Q     E K     EI  +   + +  +   + +   +         TIS+  
Sbjct: 129 NDENGNWQFFVKAELKDYFLEEIDRIGRTKVKLSELPLSKVLMQEDDSEEMTSVTISLRL 188

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----T 399
           D V   +             S ++ ++ +++  +K+N  +++   + I +QD  S     
Sbjct: 189 DAVISAI--------TNL--SRSQVKKIIEAGEVKLNWHLVTQSNIIISVQDMLSIRHYG 238

Query: 400 GNIKL-----SFGKKN 410
               +       GKK 
Sbjct: 239 RYEIINLATTKKGKKR 254


>gi|194335471|ref|YP_002017265.1| ribosomal protein S4 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226699099|sp|B4SBX3|RS4_PELPB RecName: Full=30S ribosomal protein S4
 gi|194307948|gb|ACF42648.1| ribosomal protein S4 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 203

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 8/58 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G  L+ L+         +AGFA S + AR+ +    + IN   +      +   +   
Sbjct: 84  GDNLVKLLERRFDNVVFRAGFAPSRSGARQLVTHGHLLINGKKVDIPSYIVSPSEVIE 141


>gi|327330001|gb|EGE71755.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL097PA1]
          Length = 245

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I ++  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVDQGRRVDPE 50


>gi|295425708|ref|ZP_06818395.1| tryptophan--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064724|gb|EFG55645.1| tryptophan--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 342

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 49/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++       D +R   + Q    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYDPYIMIADTQAL------TDNARDPEKIQNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     S    N  +  E  + 
Sbjct: 65  QVALDY----LAVGLDPKKSTIFVQSQIPALFELTAYYMDLVTVSRLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  + FL   Y + QA D           L   G DQ   I    ++  
Sbjct: 121 GFNDSIPVGFLN--YPVSQAADITAFK----ATLVPVGDDQEPMIEQAREIVR 167


>gi|194467617|ref|ZP_03073604.1| tryptophanyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454653|gb|EDX43550.1| tryptophanyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 340

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++       D +R   + +    
Sbjct: 14  PTGK-LHIGHYVGSLKNRIELQNTGKYDTFIMIADQQAL------TDNARDPEKIRRSLH 66

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+  L+ +    L  +    L     +    N  +  E  + 
Sbjct: 67  EVALDY----LAVGIDPKKSTILVQSQIPALSELTMHYLNLVTVARLRRNPTVKTEIKQK 122

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +        F  F Y + QA D               G DQ   +    ++  
Sbjct: 123 KFGESVPAGF--FIYPVSQAADITAFK----ADTVPVGDDQEPMLEQTREIVR 169


>gi|15621130|dbj|BAB65126.1| 406aa long hypothetical tryptophanyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 406

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 74/262 (28%), Gaps = 24/262 (9%)

Query: 3   AFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLML 59
           +  +D L ++  R       +    L           Y G    A SL  H GHL   + 
Sbjct: 65  SIINDELHVMLRRDVFFSHRDLDLVLKDYQDGKGFFLYTGR---APSLGMHIGHLIPFIF 121

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
             WLQ         +      I D    DE         + +  +         I  G  
Sbjct: 122 TKWLQDK-FNVNLYI-----EITD----DEKFMRNPEYTLDQTRQWAYDNILDIIAVGFN 171

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  +  ++ ++  I +         + + L+F  VR+    + S +     Y  L
Sbjct: 172 PDKTFIFQDTEYIRNMYPIAI--------KIAKKLTFSEVRATFGLDTSSNIGIIWYPAL 223

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q    +   +       +     W       +     K  ++ +   P LT   G     
Sbjct: 224 QIAPTMFEKRRCLIPAGIDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSSS 283

Query: 240 TLSGAIWLNKEMTSPYNFWQYW 261
               AI+L  +  +       +
Sbjct: 284 QPETAIYLTDDPKTVERKIMKY 305


>gi|315635454|ref|ZP_07890720.1| RNA pseudouridine synthase [Arcobacter butzleri JV22]
 gi|315480212|gb|EFU70879.1| RNA pseudouridine synthase [Arcobacter butzleri JV22]
          Length = 275

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 10/52 (19%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S  EA + ++   I++NN ++++   ++K  D       K+  GKK   +  
Sbjct: 33  SRREADKLIEEGKIRVNNKVVTDLATKVKSTD-------KVEIGKK---LIK 74


>gi|332995248|gb|AEF05303.1| 30S ribosomal protein S4 [Alteromonas sp. SN2]
          Length = 206

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ K         GFA++  EAR+ +   AI +N  +++     +
Sbjct: 78  EAARLKGNTGENLLQLLEKRLDNVVYRMGFASTRAEARQLVSHKAIMVNGQVVNIPSFNV 137

Query: 392 KLQDFDSTGN 401
             +D  S   
Sbjct: 138 SAEDVVSVRE 147


>gi|322491894|emb|CBZ27167.1| putative tryptophanyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 412

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 99/353 (28%), Gaps = 31/353 (8%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     + +     I   +  V  Y G   +A ++H GH+   ML  +LQ     P+ + 
Sbjct: 79  RDLHKALVDIEA-SIKTGERSVFLYTGRGPSAGTMHLGHVLPFMLTKYLQDVFDLPLVI- 136

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
                 I D   +   R +       +  E I+      I +        +  N  ++  
Sbjct: 137 -----QITD-DEKFLFRDVPFEGAKAD--ELIRSNIKDIIAFDFSPRHTFIFRNTHYMGH 188

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA------ 188
           +          +   + R ++  +V+  L    + +  +  +   QA      A      
Sbjct: 189 MYP--------TVLRLQRSMTGNAVKHTLGITDNDNVGKLAFPATQAAPCFSTAFRRVLQ 240

Query: 189 ---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSG 243
              +   C +     DQ    +       RLK      L +  L    G   KM  +   
Sbjct: 241 NGDRPMRCLIPC-AIDQDPFFVLTRAAALRLKQLPPALLHTKFLPALKGLEHKMSSSAEE 299

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
              +     +     +  R        +  +   T    E+D   +       +      
Sbjct: 300 N-GVITLHDTDKQVRKKLRRAFSGGCATLEQMQETGANLEVDVAYQYLRFFCPDDTLFAD 358

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
                        E    AA       +H+      +++ D+V     +  ++
Sbjct: 359 VTQRYRSGTLNSGEVKDLAADCIIREVLHNWRERRATVTDDDVMEFCSIRDIL 411


>gi|157736321|ref|YP_001489004.1| ribosomal large subunit pseudouridine synthase B [Arcobacter
           butzleri RM4018]
 gi|157698175|gb|ABV66335.1| ribosomal large subunit pseudouridine synthase B [Arcobacter
           butzleri RM4018]
          Length = 275

 Score = 40.9 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 10/52 (19%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S  EA + ++   I++NN ++++   ++K  D       K+  GKK   +  
Sbjct: 33  SRREADKLIEEGKIRVNNKVVTDLATKVKSTD-------KVEIGKK---LIK 74


>gi|288924622|ref|ZP_06418559.1| tryptophan--tRNA ligase [Prevotella buccae D17]
 gi|288338409|gb|EFC76758.1| tryptophan--tRNA ligase [Prevotella buccae D17]
          Length = 362

 Score = 40.9 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 72/236 (30%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNAGDYERMFVFMADVQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N   +  +   ++  G       +          +    L  + +   V R  + ++  
Sbjct: 61  QN---MMEVALDYLAAGLDPEKCTLFVQSQIPELAELTTYLMNLITVSRVQRNPTVKTEI 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                E ++    F Y + QA D   L K         G DQ   +    +L  R     
Sbjct: 118 KMRNFEANIPLGFFCYPVSQAADI-ALFKATTVP---AGEDQEPMLEVTRELVRRFNQTY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              L  P +             T    KM K+L   I+L+    S    WQ  R++
Sbjct: 174 GEVLVEPAIMLPENATARRLPGTDGKEKMSKSLGNCIYLS---DSAEEVWQKVRSM 226


>gi|303236216|ref|ZP_07322813.1| tryptophan--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483589|gb|EFL46587.1| tryptophan--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 361

 Score = 40.9 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 87/323 (26%), Gaps = 45/323 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVELQNMGDFDKMFVFMADVQAL---------TDNAENPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI     +   ++  G       +          +       + S   V R  + ++  
Sbjct: 61  QNI---IEVALDYLAAGLDPQKCTLFIQSQISEIAELTTFFMNLVSVSRVQRNPTVKTEI 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--T 218
                E ++    F Y + QA D               G DQ   +    ++  R     
Sbjct: 118 KMRNFEANIPMGFFAYPVSQAADIAAFK----ATTVPAGEDQEPMLEVAREIVRRFNTIY 173

Query: 219 PKLFALTSPLLT----------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------ 262
             +    + +L           T    KM K+L   I+L+ +  + ++  +         
Sbjct: 174 APVLVEPNIMLPENVTARRLPGTDGKEKMSKSLGNCIYLSDDADTVWSKVKGMYTDPTHL 233

Query: 263 ------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA 316
                 +++   V ++    +T      D  ++    +  +A                  
Sbjct: 234 NVSDPGHVEGNAVFTYLDAFST-DQDFADFWSEFANLDELKAAYTAGGIGDMKCKKLLNN 292

Query: 317 EKAATAAMECFDMSIHSQHMPTI 339
                            Q +P I
Sbjct: 293 VLNRMLEPMRARRHEFEQDIPEI 315


>gi|294102083|ref|YP_003553941.1| tryptophanyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617063|gb|ADE57217.1| tryptophanyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 331

 Score = 40.9 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 99/349 (28%), Gaps = 45/349 (12%)

Query: 37  TAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
             + G   T   LH GHL   L     LQ   ++ +  +    +++ D +     R+   
Sbjct: 4   RVFSGMRPTGK-LHLGHLAGALTNWVRLQNE-YECLYCIVDWHALMSDYADSSRIRK--- 58

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                      K +   ++  G     + +          +    L  I     + R  +
Sbjct: 59  ---------NCKEVLLDWLAAGLDPEKSTIFVQSHVPQHAELHLALSMITPLGWLQRNPT 109

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           ++     ++ +   ++    Y +L A D +     Y   +   G DQ  ++    +L  R
Sbjct: 110 YKEQILNIQNKDLGTYAFLGYPVLMASDIL----LYKAEMVPVGEDQSAHLEISRELARR 165

Query: 216 LKT-------PKLFALTS-PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
                          LT  P +    G KM K+   +I +     SP   W   R +   
Sbjct: 166 FNNFYGEILPEPQMLLTPTPKVPGTDGRKMSKSYGNSIDIA---DSPEEMWNKIRTMITD 222

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI----------IATEITTMVHGREEAE 317
                 +R       +       +    ++ +            I       +       
Sbjct: 223 PARE--RRTDPGDPEKCPVWDLHKVFNDDKEQHKEIIKGCTTAGIGCVQCKKMLMEHVKR 280

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDE---VSRGMGLLTLIVKAGFAT 363
                         HS+++  I ++  E   +     +  ++   GF  
Sbjct: 281 VMEPIHERRRYYESHSENLRNIILAGAERAQILAQQTIDEIVNSIGFVP 329


>gi|148543441|ref|YP_001270811.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri DSM 20016]
 gi|184152849|ref|YP_001841190.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri JCM 1112]
 gi|227363590|ref|ZP_03847707.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri MM2-3]
 gi|325681784|ref|ZP_08161303.1| tryptophan--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530475|gb|ABQ82474.1| tryptophanyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224193|dbj|BAG24710.1| tryptophanyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071386|gb|EEI09692.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri MM2-3]
 gi|324978875|gb|EGC15823.1| tryptophan--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 340

 Score = 40.9 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++       D +R   + +    
Sbjct: 14  PTGK-LHIGHYVGSLKNRVELQNTGKYDTFIMIADQQAL------TDNARDPEKIRRSLH 66

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+  L+ +    L  +    L     +    N  +  E  + 
Sbjct: 67  EVALDY----LAVGIDPKKSTILVQSQIPALSELTMHYLNLVTVARLRRNPTVKTEIKQK 122

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +        F  F Y + QA D               G DQ   +    ++  
Sbjct: 123 KFGESVPAGF--FTYPVSQAADITAFK----ADTVPVGDDQEPMLEQTREIVR 169


>gi|319948322|ref|ZP_08022468.1| RNA-binding S4 domain protein [Dietzia cinnamea P4]
 gi|319438004|gb|EFV92978.1| RNA-binding S4 domain protein [Dietzia cinnamea P4]
          Length = 99

 Score = 40.9 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           P +     ++S  + L   +  A    S  EA+  + S A+ +N  +
Sbjct: 21  PPVDDVDCDLSSKLTLGQFLKLASLLDSGAEAKDAVASGAVSVNGEV 67


>gi|239907694|ref|YP_002954435.1| tryptophanyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239797560|dbj|BAH76549.1| tryptophanyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 335

 Score = 40.9 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 89/316 (28%), Gaps = 54/316 (17%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSII---GDPSFR 87
           +       G   T  +LH GH   ++   W  +Q + H+    +    ++     DP   
Sbjct: 7   KENKRIVSGMRPTG-ALHLGHYFGVLK-NWVNIQDS-HECFFFVADWHALTTEYADPKRI 63

Query: 88  DESRRMMRSQEIQENIEKIKG---IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
                 +    +   ++  K      S   ++        M+   +WL          + 
Sbjct: 64  KGFVPELVKDWVAAGLDPEKSVLFQQSQVKEHAELHLLLSMVTPVSWLERCPTYKDQLQE 123

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +   +N                  ++    Y +L A D +     Y       G DQ  
Sbjct: 124 LAAKELN------------------TYGFLGYPVLMASDIL----LYKPGFVPVGLDQLP 161

Query: 205 NIICGIDLGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYN 256
           ++    ++  R               LT    L    G KM K+   AI L++E  +   
Sbjct: 162 HLELTREIARRANHLYGNFFPEPQAMLTPDSKLPGLDGRKMSKSYGNAIGLSEEPGAMKK 221

Query: 257 FWQYWRNIDDA------------DVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIA 303
                   +              ++  + + LT      EI            + KK++ 
Sbjct: 222 KVMSMLTCEKRARLTDPGDPKECNLFPYHELLTDPARLPEIVDGCTHATWGCGDCKKLLV 281

Query: 304 TEITTMVHGREEAEKA 319
             +   +    +  KA
Sbjct: 282 ESMNAFLEPVRDRRKA 297


>gi|227544741|ref|ZP_03974790.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri CF48-3A]
 gi|300909013|ref|ZP_07126476.1| tryptophan--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185281|gb|EEI65352.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri CF48-3A]
 gi|300894420|gb|EFK87778.1| tryptophan--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 340

 Score = 40.9 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++       D +R   + +    
Sbjct: 14  PTGK-LHIGHYVGSLKNRVELQNTGKYDTFIMIADQQAL------TDNARDPEKIRRSLH 66

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+  L+ +    L  +    L     +    N  +  E  + 
Sbjct: 67  EVALDY----LAVGIDPKKSTILVQSQIPALSELTMHYLNLVTVARLRRNPTVKTEIKQK 122

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +        F  F Y + QA D               G DQ   +    ++  
Sbjct: 123 KFGESVPAGF--FTYPVSQAADITAFK----ADTVPVGDDQEPMLEQTREIVR 169


>gi|289705978|ref|ZP_06502352.1| tryptophan--tRNA ligase [Micrococcus luteus SK58]
 gi|289557315|gb|EFD50632.1| tryptophan--tRNA ligase [Micrococcus luteus SK58]
          Length = 360

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 62/191 (32%), Gaps = 20/191 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +A SLH G+    ++ +   +   +    +    +             +   Q+  
Sbjct: 34  GMQPSADSLHLGNYLGALVNWERTQADFEAFFFIPDLHA-------------ITVPQDPA 80

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E+ +   + FI  G     + +          +   +L  +       RM  F+  +
Sbjct: 81  ALAERTRVAAAQFIAGGIDPERSTLFVQSQVPEHAQLAWVLTCMTGMGEAMRMTQFKD-K 139

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           S  +   +       Y +L A D + L + +   +   G DQ  ++    DL +R     
Sbjct: 140 SAKQGADAAGVGLLAYPMLMAADIL-LYQPHGVPV---GDDQRQHVELTRDLAQRFNHR- 194

Query: 221 LFALTSPLLTT 231
            +  T  + T 
Sbjct: 195 -YGETFVVPTG 204


>gi|227877963|ref|ZP_03995967.1| tryptophanyl-tRNA synthetase II [Lactobacillus crispatus JV-V01]
 gi|256844343|ref|ZP_05549829.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849253|ref|ZP_05554686.1| tryptophanyl-tRNA synthetase II [Lactobacillus crispatus MV-1A-US]
 gi|262047268|ref|ZP_06020226.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|295692074|ref|YP_003600684.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|312978354|ref|ZP_07790096.1| tryptophan--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227862433|gb|EEJ69948.1| tryptophanyl-tRNA synthetase II [Lactobacillus crispatus JV-V01]
 gi|256613421|gb|EEU18624.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256714029|gb|EEU29017.1| tryptophanyl-tRNA synthetase II [Lactobacillus crispatus MV-1A-US]
 gi|260572513|gb|EEX29075.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|295030180|emb|CBL49659.1| Tryptophanyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|310894697|gb|EFQ43769.1| tryptophan--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 340

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPAKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 DFKDSIPIGFLN--YPVSQAADITAFK----ATVIPVGDDQEPMLEQTREIVR 167


>gi|238852843|ref|ZP_04643248.1| tryptophan-tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282852542|ref|ZP_06261884.1| tryptophan--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|238834537|gb|EEQ26769.1| tryptophan-tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282556284|gb|EFB61904.1| tryptophan--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 342

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G ++P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYEPYIMIADTQAL------TDNARDPEKIKNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 NFKDSIPVGFLN--YPVSQAADITAFK----ATVVPVGDDQEPMLEQTREIVR 167


>gi|168003714|ref|XP_001754557.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694178|gb|EDQ80527.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 388

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 84/247 (34%), Gaps = 33/247 (13%)

Query: 19  HQISNPR----ELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLF---WLQKTGHKP 70
           ++         EL  L ++      Y G++ +   +H      +M +     L K+G   
Sbjct: 50  NKCIPEENDFAELRNLLAKKKDPVCYDGFEPSGR-MHI--AQGIMKVINVNKLTKSGCVF 106

Query: 71  ISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              +    + + +    D +  + +    I+                G        L + 
Sbjct: 107 KFWIADWFAQLNNKMGGDLKKIQTVGRYMIEVWKAA-----------GMDLERVEFLWSS 155

Query: 130 TWLCSI--KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
             +     +Y  L+ +I    ++NR+    ++  R + ++ +S  +  Y  +Q  D   L
Sbjct: 156 DEINGRASEYWPLVMDIARRNTLNRITRCCTIMGRKEGDE-MSAGQIFYPCMQCADIFFL 214

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTLSGA 244
                  +   G+DQ    +   +  +++K   K   L+  +L    A   KM K+   +
Sbjct: 215 K----ADICQLGNDQVRVNVLAREYCDQIKRKLKPIILSHHMLPGLLAGQEKMSKSDPNS 270

Query: 245 IWLNKEM 251
               ++ 
Sbjct: 271 AIFMEDD 277


>gi|293381480|ref|ZP_06627475.1| tryptophan--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|290921950|gb|EFD98957.1| tryptophan--tRNA ligase [Lactobacillus crispatus 214-1]
          Length = 340

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPAKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 DFKDSIPIGFLN--YPVSQAADITAFK----ATVIPVGDDQEPMLEQTREIVR 167


>gi|258652004|ref|YP_003201160.1| tryptophanyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258555229|gb|ACV78171.1| tryptophanyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 351

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 71/240 (29%), Gaps = 31/240 (12%)

Query: 24  PRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           P  L+    +   T  +  G   T  +LH GH    +     LQ  G   + ++     +
Sbjct: 14  PEPLEQRIRRHPHTFRVLSGDRPTG-ALHLGHYLGTLRNRVQLQNLGVPVVVVIADYQ-V 71

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D S     R  +R+   +                    +    LN            L
Sbjct: 72  ITDRSDLGPVRDRVRTLVAEYLAAG----LDPARSVIFPHSAVAALNQL------MLPFL 121

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
                +    N  +  E++ SR      L  L   Y + QA D + +        +    
Sbjct: 122 SLVTDAELRRNPTVKAEALASRR----PLGGLLLTYPVHQAADILGVGGTVVPVGR---- 173

Query: 201 DQWGNIICGIDLGERLK--TPKLFALTSPL------LTTASGTKMGKTLSGAIWLNKEMT 252
           DQ  ++     +  R       +FAL  PL      L    G KM KT    I L     
Sbjct: 174 DQLPHLELTRVIARRFNERYGPVFALPEPLLSGTPNLLGTDGAKMSKTRGNTIALGDTAD 233


>gi|227894426|ref|ZP_04012231.1| tryptophan--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227863796|gb|EEJ71217.1| tryptophan--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 340

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPSKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 NFKDSIPVGFLN--YPVSQAADITAFK----ATIVPVGDDQEPMLEQTREIVR 167


>gi|149203456|ref|ZP_01880426.1| tryptophanyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149143289|gb|EDM31328.1| tryptophanyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 342

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 91/349 (26%), Gaps = 44/349 (12%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              + G   +  +LH G+      L      Q  G + +  M    +             
Sbjct: 8   PRVFSGIQPSG-NLHLGNYLG--ALKRFAEAQNKGIQTLYCMVDLHA------------- 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +   Q   +     + + + FI  G     +++ N        +   +   +     + R
Sbjct: 52  ITVWQNPADLARATRELAAGFIASGLDPAKSILFNQSQVAEHTQMAWVFNCVARMGWMQR 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+      K  Q+ S   F Y  L A D +     +   + +G  DQ  ++    D+
Sbjct: 112 MTQFKD--KAGKNAQNASLGLFAYPALMAADILT---YHATHVPVG-EDQKQHLELTRDI 165

Query: 213 GERLKTP---KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
             +       + F +  P++  A+   M  +L        +            +  D   
Sbjct: 166 AIKFNHDYGVEFFPIPEPVIEGAATRVM--SLRDGSNKMSKSDPSDMSRINLTDDADTIA 223

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
               K  T       +        E      I A      V        A        + 
Sbjct: 224 KKIRKAKTDPEPLPSEAAGLEGRPEARNLVNIYAALADMTVDQ----VMAEAGGKPFSEF 279

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
                 +    I+         +  L          +E  R L   A +
Sbjct: 280 KPMLADLAVDRIAPISTEMARLMQDL----------SEIDRILADGAAR 318


>gi|323491252|ref|ZP_08096437.1| tryptophanyl-tRNA synthetase II [Vibrio brasiliensis LMG 20546]
 gi|323314378|gb|EGA67457.1| tryptophanyl-tRNA synthetase II [Vibrio brasiliensis LMG 20546]
          Length = 340

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 60/214 (28%), Gaps = 29/214 (13%)

Query: 45  TASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           T   LH GH    +     LQ   H    L+     +         +       ++  NI
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQDI-HDQTILVADMQGL---------TDNAHNPSKVSSNI 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +       +     KT   + +    L  +          S    N  +  E      
Sbjct: 69  LNVVA-DYLAVGIDPTKTTICLQSQLPALAELTMYYSNLVSISRLERNPTVKSEIQNKGF 127

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------ 217
           +R     F    Y I QA D       ++  L   G DQ   +    ++  ++       
Sbjct: 128 ERSIPAGF--LTYPISQAADIT----GFNASLIPVGDDQLPMLEQTNEIVRKINSLAGRA 181

Query: 218 ----TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  L      L +T    KM KT+  AI L
Sbjct: 182 VLTECRPLLGNAPRLPSTDGKNKMSKTMGNAINL 215


>gi|227505353|ref|ZP_03935402.1| tryptophanyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198055|gb|EEI78103.1| tryptophanyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 339

 Score = 40.9 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 61/204 (29%), Gaps = 22/204 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   TA S H G+    +     LQ   +     +    +I                +E+
Sbjct: 12  GIQPTADSYHLGNYLGALKQWIDLQN-DYDAFYFIPDLHAIT----------VEQNPEEL 60

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +             I  G     + +          +   +L+ +  F   +RM  F+  
Sbjct: 61  RNRTVAGAAQL---IALGIDPEKSTLFVQSHVPAHTELTWVLQCLTGFGEASRMTQFKD- 116

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +S  +     +   F Y +L A D + L       +   G DQ  ++    +L ER    
Sbjct: 117 KSAKQGTDRTTVGLFTYPVLMAADIL-LYSPNYVPV---GEDQRQHLELTRNLAERFNNK 172

Query: 220 --KLFALTSPLLTTASGTKMGKTL 241
             + F +  P +   S        
Sbjct: 173 YGETFRVPEPFIPEDSAKIYDLQE 196


>gi|331252013|ref|XP_003338582.1| hypothetical protein PGTG_20023 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309317572|gb|EFP94163.1| hypothetical protein PGTG_20023 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 399

 Score = 40.9 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 52/170 (30%), Gaps = 16/170 (9%)

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +P     S  +M         L +    P N    +            +         + 
Sbjct: 6   NPFNVKKSFPRMSWNPQNLFNLYQRSFGPENKDTNFLRSSKTVYWQKWRS------KAVT 59

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
           R       +  + K+                  A  ++++        + +P  ++   E
Sbjct: 60  RAYHGDWIQEKKFKR--------HYLPASLPALAVKSSLKKSRYGNREEKVPLAALMYQE 111

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + R + +   I ++ FA S  EARR +   A+K+N    +    ++   D
Sbjct: 112 LERRLDV--AIFRSCFADSVYEARRIVIHGAVKLNGVKCNAPWTRLHPGD 159


>gi|296131863|ref|YP_003639110.1| ribosomal protein S4 [Thermincola sp. JR]
 gi|296030441|gb|ADG81209.1| ribosomal protein S4 [Thermincola potens JR]
          Length = 208

 Score = 40.9 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA+S  EAR+ ++     +N+  ++     +K+ D      
Sbjct: 102 NVVYRLGFASSRTEARQLVRHGHFTVNDKKVNIPSYSLKVGDVIKIKE 149


>gi|118475659|ref|YP_892487.1| tryptophanyl-tRNA synthetase [Campylobacter fetus subsp. fetus
           82-40]
 gi|261886443|ref|ZP_06010482.1| tryptophanyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
 gi|118414885|gb|ABK83305.1| tryptophanyl-tRNA synthetase [Campylobacter fetus subsp. fetus
           82-40]
          Length = 323

 Score = 40.9 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/307 (10%), Positives = 82/307 (26%), Gaps = 41/307 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHK-PISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   +   LH G+    +  +   Q  G+      +    ++                 E
Sbjct: 6   GLQPSGK-LHLGNYFASIKPMVDTQNLGNDDMFMFIANYHAM-------------TSVNE 51

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            ++  E       +F+  G     +              ++L   +     +  +    +
Sbjct: 52  AKKLKESTFEAACAFLALGIDPNKSTFWVQSD---VKDVLELYWILSQLTPMGLVERAHA 108

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +        F+Y +L A D +     ++  +   G DQ  ++    D+  +   
Sbjct: 109 YKDKVAKGFEAHHGLFSYPVLMAADIL----LFNSNIVPVGKDQIQHVEIARDIAIKFNN 164

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                 T P          +    G KM K+    I +       ++  +  +    + V
Sbjct: 165 AHGDIFTIPEAGVQQNVATVPGIDGAKMSKSYGNTIDI-------FSDAKTLKKQCSSIV 217

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA--TEITTMVHGREEAEKAATAAMECF 327
                          +     +     E ++ +A   E     +G  +            
Sbjct: 218 TDSTALEAPKQWRNCNIFNIAKLFLNTEEQEALAARYEKGGEGYGHFKMYLNELVWNYFA 277

Query: 328 DMSIHSQ 334
           +     +
Sbjct: 278 EAKEKFE 284


>gi|42522113|ref|NP_967493.1| tryptophanyl-tRNA synthetase II [Bdellovibrio bacteriovorus HD100]
 gi|39574644|emb|CAE78486.1| Tryptophan--tRNA ligase [Bdellovibrio bacteriovorus HD100]
          Length = 331

 Score = 40.9 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 71/229 (31%), Gaps = 25/229 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ + H    ++    ++         +     + ++++N
Sbjct: 11  PTGP-LHLGHYVGSLKNRVDLQDS-HDQYIIIADVQAL---------TDNYDDTTKVRDN 59

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           I     +   ++  G     + +          +       + +   + R  + ++   +
Sbjct: 60  I---LQVTLDYLAAGIDPAKSTIFVQSELPELFEMTTYFMNLVTVARLERNPTVKTEIQQ 116

Query: 163 LKREQSLSFLEFNYMILQAYDFV--------ELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              E+SL      Y + QA D +                  Q     Q  N I   D  +
Sbjct: 117 KNLEKSLPAGFLTYPVSQAADILGFKANLVPAGEDQNPMIEQTNEIAQRFNHIYKTDFFK 176

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            +K     A   P +      KM K+L  AI+L+ +  +     Q    
Sbjct: 177 PVKGMPGVAGRLPGI--DGKAKMSKSLGNAIYLSDDADTIKKKVQKMYT 223


>gi|157147660|ref|YP_001454979.1| tryptophanyl-tRNA synthetase II [Citrobacter koseri ATCC BAA-895]
 gi|157084865|gb|ABV14543.1| hypothetical protein CKO_03463 [Citrobacter koseri ATCC BAA-895]
          Length = 335

 Score = 40.9 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  +LH GH    +      +  H+   L+     +         +      Q+I++NI
Sbjct: 13  PTG-ALHLGHYVGSLRQRVALQHTHQQFVLIADLQGL---------TDNGTNPQKIRDNI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++              T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 63  PEVLA-DYLAAGIDPELTTLCLQSALPALAELTMLYMNVVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R   + F    Y I QA D       Y       G DQ   I    ++  ++ 
Sbjct: 122 TRSLPVGF--MVYPISQAADITAFKAEY----VPVGDDQLPMIEQTNEIVHKMN 169


>gi|58616832|ref|YP_196031.1| tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|58416444|emb|CAI27557.1| Tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 340

 Score = 40.9 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 80/245 (32%), Gaps = 33/245 (13%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T  S+H G+    +     LQ + +K    +    ++         +       E+
Sbjct: 16  GIQPTG-SIHLGNYLGFIRNGVSLQNS-YKCFFFLADLHTL---------TSEAYNPDEL 64

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N        ++++  G    ++++ +        + + +   I S   +NRM  F+  
Sbjct: 65  KKN---SINTLATYLACGIDPENSVLFSQSFIPAHTELLWIFSCITSTGQLNRMTQFK-- 119

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
                +  + S   ++Y +L A D +     Y   +   G DQ  ++    D+ +   T 
Sbjct: 120 EKSRNKVSTASLGLYSYPVLMAADIL----LYQANIVPVGIDQKQHLELARDIAQAFNTK 175

Query: 220 ---KLFALTSPLL---------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
              + F L  PL+               KM K+            S     Q        
Sbjct: 176 YNTQYFQLPEPLIVQESAKIMSLRDGKKKMSKSDVSDYSRINLEDSNDLIAQKINKATTD 235

Query: 268 DVVSF 272
            +V F
Sbjct: 236 SIVGF 240


>gi|221058665|ref|XP_002259978.1| tryptophan--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193810051|emb|CAQ41245.1| tryptophan--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 651

 Score = 40.9 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            L+          Y G   ++ S+H GHL       +LQ   + P+ +
Sbjct: 294 LLNYYEQNKCFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLVI 341


>gi|170288482|ref|YP_001738720.1| pseudouridine synthase [Thermotoga sp. RQ2]
 gi|170175985|gb|ACB09037.1| pseudouridine synthase [Thermotoga sp. RQ2]
          Length = 239

 Score = 40.9 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +  +G   +  E ++ +K   + +N  ++ +    +   D  +     + F KK +I+
Sbjct: 7   LSNSG-VGTRKEVKKLIKQGRVTVNGRVVLDPGHPVLENDAVALDGEVVRFHKKVYIL 63


>gi|326384768|ref|ZP_08206445.1| hemolysin A [Gordonia neofelifaecis NRRL B-59395]
 gi|326196576|gb|EGD53773.1| hemolysin A [Gordonia neofelifaecis NRRL B-59395]
          Length = 300

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 20/39 (51%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G A S  +AR  +++ ++K+N +  +     +   
Sbjct: 11  LVRRGLARSREQARELIEAGSVKVNGTPATKASTNVAKD 49


>gi|317490401|ref|ZP_07948885.1| ribosomal protein S4 [Eggerthella sp. 1_3_56FAA]
 gi|325833388|ref|ZP_08165837.1| ribosomal protein S4 [Eggerthella sp. HGA1]
 gi|316910536|gb|EFV32161.1| ribosomal protein S4 [Eggerthella sp. 1_3_56FAA]
 gi|325485312|gb|EGC87781.1| ribosomal protein S4 [Eggerthella sp. HGA1]
          Length = 208

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 42/123 (34%), Gaps = 3/123 (2%)

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           +  T     E    A  +  +    +     ++      +             +DM+   
Sbjct: 25  RCYTEKCAIERRNYAPGEAGKKRIKESEYRNQLREKQKTKRIYGVLEKQFRHYYDMANRQ 84

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + +   ++ +   SR   ++    + GFA S  EAR+ ++   I +N   +     ++K 
Sbjct: 85  KGVTGENLLRILESRLDNVVY---RLGFAKSRAEARQQVRHGHITVNGRRVDIPSFRVKP 141

Query: 394 QDF 396
            D 
Sbjct: 142 GDL 144


>gi|89897860|ref|YP_514970.1| tryptophanyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89331232|dbj|BAE80825.1| tryptophanyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 345

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 81/280 (28%), Gaps = 38/280 (13%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH    +     LQ    ++   ++    ++         +
Sbjct: 2   NNKKRVLTGDRPTGK-LHLGHWVGSIKNRLDLQNNPAYECFFIVADLHTL--------TT 52

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R         +N   I  + + ++  G   + + +          +  +L        SV
Sbjct: 53  RVRKEQVLDVDN--HIYEVLADWLSVGIDPSKSAIYLQSAI---PEIYELHLLFSMLISV 107

Query: 151 NRMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           NR++      E  ++    E  LS     Y +LQ+ D +        +L   G D   ++
Sbjct: 108 NRIMGLPSLKEMAKNASIEEGGLSLGLVGYPVLQSADIL----LAKAQLVPVGKDNEAHV 163

Query: 207 ICGIDLGE---------RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
               D+             +   L    + L+      KM K+ + AI+L+ +     + 
Sbjct: 164 ELTRDIARNFNRLYGEIFPEPETLQGDLTSLVGIDGQGKMSKSANNAIYLSDDAEIIQDK 223

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
            +           +     T   +              N+
Sbjct: 224 VKRMYT-----DPNRIHATTPGKVEGNPLFIYHDIFNPNK 258


>gi|260662605|ref|ZP_05863500.1| tryptophanyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553296|gb|EEX26239.1| tryptophanyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 337

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q++G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYVGSLRERVKMQESGEYDPFIMIADQQAL------TDNARDPEKIRRSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 65  EVALDY----LAVGLDPAKSTLFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              R     F  F Y + Q  D           L   G DQ   +    ++  
Sbjct: 121 NFNRSIPAGF--FTYPVSQTADITAFK----ANLVPVGDDQEPMLEQAREIVR 167


>gi|269128486|ref|YP_003301856.1| 30S ribosomal protein S4 [Thermomonospora curvata DSM 43183]
 gi|268313444|gb|ACY99818.1| ribosomal protein S4 [Thermomonospora curvata DSM 43183]
          Length = 209

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            ++ +AGFA S + AR+ ++    K+N   +      +   D     
Sbjct: 102 NVVYRAGFAKSRDMARQLIRHGHFKVNGRKVDIPSFLVSENDVIEVK 148


>gi|225174878|ref|ZP_03728875.1| hemolysin A [Dethiobacter alkaliphilus AHT 1]
 gi|225169518|gb|EEG78315.1| hemolysin A [Dethiobacter alkaliphilus AHT 1]
          Length = 273

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI--KLSFG 407
           +  AG   S + AR  + +  + ++   +      + +        +   +S G
Sbjct: 12  LTDAGLFPSRSAARAAVMAGLVTVDGQRVDKPGTAVSVDAAVDVRELPRYVSRG 65


>gi|170746519|ref|YP_001752779.1| RNA-binding S4 domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653041|gb|ACB22096.1| RNA-binding S4 domain protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 601

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E   G  +   + +AG A S  +A   + +  + +N   +++    +   D  
Sbjct: 81  ETPPGERIAKAMARAGIA-SRRDAETMIVAGRVSVNGETLTSPARNVTENDRI 132


>gi|28211988|ref|NP_782932.1| putative ribosomal small subunit pseudouridine synthase A
           [Clostridium tetani E88]
 gi|28204431|gb|AAO36869.1| putative ribosomal small subunit pseudouridine synthase A
           [Clostridium tetani E88]
          Length = 238

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 17/31 (54%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  E ++ +K+N +++N   + +  + I  +
Sbjct: 15  SRKEVKKLIKNNLVEVNGEKVKDPSINIDPE 45


>gi|89099642|ref|ZP_01172516.1| 16S pseudouridylate synthase [Bacillus sp. NRRL B-14911]
 gi|89085585|gb|EAR64712.1| 16S pseudouridylate synthase [Bacillus sp. NRRL B-14911]
          Length = 239

 Score = 40.9 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  E ++ LK  ++ +N+  I + K  +  +
Sbjct: 14  SRKEVKKLLKDGSVTVNDEKIKDAKQHVDPE 44


>gi|257792535|ref|YP_003183141.1| 30S ribosomal protein S4 [Eggerthella lenta DSM 2243]
 gi|257476432|gb|ACV56752.1| ribosomal protein S4 [Eggerthella lenta DSM 2243]
          Length = 208

 Score = 40.9 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 42/123 (34%), Gaps = 3/123 (2%)

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           +  T     E    A  +  +    +     ++      +             +DM+   
Sbjct: 25  RCYTEKCAIERRNYAPGEAGKKRIKESEYRNQLREKQKTKRIYGVLEKQFRHYYDMANRQ 84

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + +   ++ +   SR   ++    + GFA S  EAR+ ++   I +N   +     ++K 
Sbjct: 85  KGVTGENLLRILESRLDNVVY---RLGFAKSRAEARQQVRHGHITVNGRRVDIPSFRVKP 141

Query: 394 QDF 396
            D 
Sbjct: 142 GDL 144


>gi|254424480|ref|ZP_05038198.1| hemolysin A [Synechococcus sp. PCC 7335]
 gi|196191969|gb|EDX86933.1| hemolysin A [Synechococcus sp. PCC 7335]
          Length = 283

 Score = 40.9 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           L+V+ G   S  +A+R +++  +KI   II      +         
Sbjct: 22  LLVEQGLCPSRQQAQRLIRAGEVKIAQQIIDKPGTLVATDAVIELK 67


>gi|15643034|ref|NP_228077.1| 16S pseudouridylate synthase [Thermotoga maritima MSB8]
 gi|4980760|gb|AAD35352.1|AE001708_20 16S pseudouridylate synthase [Thermotoga maritima MSB8]
          Length = 239

 Score = 40.9 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +  +G   +  E ++ +K   + +N  ++ +    +   D  +     + F KK +I+
Sbjct: 7   LSNSG-VGTRKEVKKLIKQGRVTVNGRVVLDPGHPVLENDAVALDGEVVRFHKKVYIL 63


>gi|229029250|ref|ZP_04185341.1| Pseudouridine synthase [Bacillus cereus AH1271]
 gi|229172210|ref|ZP_04299774.1| Pseudouridine synthase [Bacillus cereus MM3]
 gi|228611198|gb|EEK68456.1| Pseudouridine synthase [Bacillus cereus MM3]
 gi|228732063|gb|EEL82954.1| Pseudouridine synthase [Bacillus cereus AH1271]
          Length = 242

 Score = 40.9 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|169604893|ref|XP_001795867.1| hypothetical protein SNOG_05462 [Phaeosphaeria nodorum SN15]
 gi|111065406|gb|EAT86526.1| hypothetical protein SNOG_05462 [Phaeosphaeria nodorum SN15]
          Length = 495

 Score = 40.9 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R F       + LD          Y G   ++ ++H GH        WLQ     P+
Sbjct: 82  LRRRLFFSHRDLEQILDTYERGEDFLLYTGRGPSSDAMHIGHTIPFEFTKWLQDVFDVPL 141

Query: 72  SLM 74
            +M
Sbjct: 142 VIM 144


>gi|325299964|ref|YP_004259881.1| tryptophanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319517|gb|ADY37408.1| tryptophanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 363

 Score = 40.9 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 70/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K       G ++         +  +   ++I+
Sbjct: 13  PTGK-LHIGHYVGSLRRRVELQNSGLYDKIFVFEADGQAL---------TDNIDNPEKIR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +    +     K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLSVGLDPAKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  R     
Sbjct: 122 RNFETSIPVGF--FVYPISQAADITAFK----ATTVPVGEDQEPMLEQAREIVRRFNYIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 176 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDPADEVEKKVRSMYT 230


>gi|300362472|ref|ZP_07058648.1| tryptophan--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353463|gb|EFJ69335.1| tryptophan--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 342

 Score = 40.9 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G ++P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYEPYIMIADTQAL------TDNARDPEKIKNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 NFKDSIPVGFLN--YPVSQAADITAFK----ATVVPVGDDQEPMLEQTREIVR 167


>gi|320581194|gb|EFW95415.1| Mitochondrial ribosomal component of the small subunit [Pichia
           angusta DL-1]
          Length = 476

 Score = 40.9 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 54/188 (28%), Gaps = 30/188 (15%)

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T+    T    +M           K+    +     +                       
Sbjct: 6   TNLFSLTRGRVRMALNKHNLFNFYKDRAPMFKVMSMFMQK----------------WDSK 49

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
            +     G+ I E +         +   + +      A++           + T ++ + 
Sbjct: 50  QKTRGYHGEHIPEGRW------LKLFQKKLDGVAQMDASLSGKANDETPMVLQTFAVLEK 103

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIK 403
            +         + +A FA+S  +AR+ + +  +K+N   I +    +   D F    +  
Sbjct: 104 RLDV------AVFRAMFASSVRQARQFILAGDVKVNGVPIKHPSYPLSPGDVFSVEPDRV 157

Query: 404 LSF-GKKN 410
           L   G+K 
Sbjct: 158 LQALGEKK 165


>gi|58578773|ref|YP_196985.1| tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417399|emb|CAI26603.1| Tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 339

 Score = 40.9 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 80/245 (32%), Gaps = 33/245 (13%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T  S+H G+    +     LQ + +K    +    ++         +       E+
Sbjct: 16  GIQPTG-SIHLGNYLGFIRNGVSLQNS-YKCFFFLADLHTL---------TSETYNPDEL 64

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N        ++++  G    ++++ +        + + +   I S   +NRM  F+  
Sbjct: 65  KKN---SINTLATYLACGIDPENSVLFSQSFIPAHTELLWIFSCITSTGQLNRMTQFK-- 119

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
                +  + S   ++Y +L A D +     Y   +   G DQ  ++    D+ +   T 
Sbjct: 120 EKSRNKVSTASLGLYSYPVLMAADIL----LYQANIVPVGIDQKQHLELARDIAQAFNTK 175

Query: 220 ---KLFALTSPLL---------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
              + F L  PL+               KM K+            S     Q        
Sbjct: 176 YNTQYFQLPEPLIVQESAKIMSLRDGKKKMSKSDVSDYSRINLEDSNDLIAQKINKATTD 235

Query: 268 DVVSF 272
            +V F
Sbjct: 236 SIVGF 240


>gi|160890592|ref|ZP_02071595.1| hypothetical protein BACUNI_03037 [Bacteroides uniformis ATCC 8492]
 gi|156859591|gb|EDO53022.1| hypothetical protein BACUNI_03037 [Bacteroides uniformis ATCC 8492]
          Length = 242

 Score = 40.9 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 2   DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQTV 60

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 61  SIERKIYVLLN 71


>gi|325207507|gb|ADZ02959.1| S4 RNA-binding domain protein [Neisseria meningitidis NZ-05/33]
          Length = 77

 Score = 40.9 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           I   E +  + L  L+  AG A S  +A+  +    +  N  
Sbjct: 4   IVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGE 45


>gi|325201528|gb|ADY96982.1| S4 RNA-binding domain protein [Neisseria meningitidis M01-240149]
          Length = 77

 Score = 40.9 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           I   E +  + L  L+  AG A S  +A+  +    +  N  
Sbjct: 4   IVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGE 45


>gi|327441294|dbj|BAK17659.1| tryptophanyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 329

 Score = 40.5 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 69/242 (28%), Gaps = 21/242 (8%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   T + +  G+    +  F   +  +  I  +    + I  P  R E R+ +RS
Sbjct: 3   TIFSGVQPTGT-ITLGNYIGAIKQFPALQENNNAIYCIVDQHA-ITVPQDRLELRKNIRS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                                  +++        W+           +    S+  +   
Sbjct: 61  LAAMYIACG----IDPKKSILFIQSEVPAHAQAGWM-----------LQCVASIGELERM 105

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +   ++S+S     Y  L A D +     Y+  +   G DQ  +I    DL ER 
Sbjct: 106 TQFKDKSTGKESVSAALLTYPPLMAADIL----LYNTDIVPVGEDQKQHIELTRDLAERF 161

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
                  LT P +         K+L        +  +         +            +
Sbjct: 162 NKRYNDVLTIPDIQLPKEGARIKSLQEPTKKMSKSDTNSKATIRLLDTAKEIEKKIKSAV 221

Query: 277 TT 278
           T 
Sbjct: 222 TD 223


>gi|229160522|ref|ZP_04288517.1| Pseudouridine synthase [Bacillus cereus R309803]
 gi|228622932|gb|EEK79763.1| Pseudouridine synthase [Bacillus cereus R309803]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|315607506|ref|ZP_07882501.1| tryptophan--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250689|gb|EFU30683.1| tryptophan--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 382

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 71/236 (30%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++         +      ++I+
Sbjct: 31  PTGK-LHLGHYVGSLRRRVQLQNAGDYERMFVFMADVQAL---------TDNADNPEKIR 80

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N   +  +   ++  G       +          +    L  + +   V R  + ++  
Sbjct: 81  QN---MMEVALDYLAAGLDPEKCTLFVQSQIPELAELTTYLMNLITVSRVQRNPTVKTEI 137

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                E ++    F Y + QA D       +       G DQ   +    +L  R     
Sbjct: 138 KMRNFEANIPLGFFCYPVSQAADI----ALFKATTVPAGEDQEPMLEVTRELVRRFNQTY 193

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              L  P +             T    KM K+L   I+L+    S    WQ  R++
Sbjct: 194 GEVLVEPAIMLPENATARRLPGTDGKEKMSKSLGNCIYLS---DSAEEVWQKVRSM 246


>gi|303233613|ref|ZP_07320270.1| tryptophan--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495282|gb|EFL55031.1| tryptophan--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 360

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 51/180 (28%), Gaps = 24/180 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G   K   ++    ++         +       +++
Sbjct: 11  PTGK-LHLGHYVGSLKNRVIMQNKGDFDKMYVMIADAQAL---------TDNFNNPDKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ENI     +   ++  G       +        L  + +  +     S    N  +  E 
Sbjct: 61  ENI---IEVALDYLSCGIDPNKVTIFVQSHVEQLTELMFYYMNLVTLSRLERNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +        + F    Y I QA D       ++  +   G DQ   +    ++      
Sbjct: 118 KQKEFGASLPVGF--LTYPISQAADIT----LFNANIVPVGEDQLPMLEQTREIVRTFNN 171


>gi|284006805|emb|CBA72072.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 70

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 22/57 (38%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            I   +    + L  L+   G   S   A+  +    +K++  + + ++ +I   + 
Sbjct: 2   EIFHLDGQPYIKLCDLLKLQGLVESGAAAKTLIAQGEVKVDGKVETRKRCKISKNNI 58


>gi|269102853|ref|ZP_06155550.1| tryptophanyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162751|gb|EEZ41247.1| tryptophanyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 359

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 59/225 (26%), Gaps = 26/225 (11%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           LH GH    +      +  ++   L+     +         +       ++  NI  +  
Sbjct: 42  LHLGHFVGSLQQRVALQHQYQQTILIADMQGL---------TDNGHNPHKVASNILNVMA 92

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
                +     KT   + +    L  +          S    N  +  E    +  +   
Sbjct: 93  -DYLAVGIDPTKTTICLQSALPALAELTMFYSNVVSVSRLQRNPTVKAEIQSKQFGQSIP 151

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFALT 225
             F    Y I QA D           L   G DQ   I    ++  ++       +    
Sbjct: 152 TGF--LTYPISQAADITAFK----ATLIPVGDDQLPMIEQTNEIVRKINTIADKDILVEC 205

Query: 226 SPLLTT-------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            PLL+            KM K++   I+L           +    
Sbjct: 206 QPLLSHVARLPSPDGKNKMSKSMGNCIFLGASEKEIRQAVKAMFT 250


>gi|260641988|ref|ZP_05859178.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           finegoldii DSM 17565]
 gi|260624005|gb|EEX46876.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           finegoldii DSM 17565]
          Length = 253

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 13  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 65


>gi|30019620|ref|NP_831251.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           ATCC 14579]
 gi|49477247|ref|YP_035689.1| pseudouridylate synthase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118477028|ref|YP_894179.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis str. Al Hakam]
 gi|196036830|ref|ZP_03104219.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           W]
 gi|196039034|ref|ZP_03106341.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           NVH0597-99]
 gi|196047636|ref|ZP_03114843.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           03BB108]
 gi|206968047|ref|ZP_03229003.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH1134]
 gi|218232708|ref|YP_002366253.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           B4264]
 gi|218902682|ref|YP_002450516.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH820]
 gi|225863435|ref|YP_002748813.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           03BB102]
 gi|228914146|ref|ZP_04077764.1| Pseudouridine synthase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228920281|ref|ZP_04083629.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228926603|ref|ZP_04089672.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228932858|ref|ZP_04095725.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228945172|ref|ZP_04107528.1| Pseudouridine synthase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228951948|ref|ZP_04114046.1| Pseudouridine synthase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228957847|ref|ZP_04119587.1| Pseudouridine synthase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229043313|ref|ZP_04191033.1| Pseudouridine synthase [Bacillus cereus AH676]
 gi|229069124|ref|ZP_04202416.1| Pseudouridine synthase [Bacillus cereus F65185]
 gi|229078754|ref|ZP_04211308.1| Pseudouridine synthase [Bacillus cereus Rock4-2]
 gi|229090533|ref|ZP_04221769.1| Pseudouridine synthase [Bacillus cereus Rock3-42]
 gi|229109026|ref|ZP_04238627.1| Pseudouridine synthase [Bacillus cereus Rock1-15]
 gi|229121114|ref|ZP_04250351.1| Pseudouridine synthase [Bacillus cereus 95/8201]
 gi|229126886|ref|ZP_04255898.1| Pseudouridine synthase [Bacillus cereus BDRD-Cer4]
 gi|229144171|ref|ZP_04272585.1| Pseudouridine synthase [Bacillus cereus BDRD-ST24]
 gi|229149770|ref|ZP_04278000.1| Pseudouridine synthase [Bacillus cereus m1550]
 gi|229177979|ref|ZP_04305351.1| Pseudouridine synthase [Bacillus cereus 172560W]
 gi|229183767|ref|ZP_04310984.1| Pseudouridine synthase [Bacillus cereus BGSC 6E1]
 gi|229189653|ref|ZP_04316668.1| Pseudouridine synthase [Bacillus cereus ATCC 10876]
 gi|254721252|ref|ZP_05183042.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A1055]
 gi|296502142|ref|YP_003663842.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis BMB171]
 gi|29895164|gb|AAP08452.1| Ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           ATCC 14579]
 gi|49328803|gb|AAT59449.1| pseudouridylate synthase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118416253|gb|ABK84672.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis str. Al Hakam]
 gi|195990559|gb|EDX54538.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           W]
 gi|196021550|gb|EDX60250.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           03BB108]
 gi|196030179|gb|EDX68779.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           NVH0597-99]
 gi|206736967|gb|EDZ54114.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH1134]
 gi|218160665|gb|ACK60657.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           B4264]
 gi|218539452|gb|ACK91850.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH820]
 gi|225790880|gb|ACO31097.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           03BB102]
 gi|228593917|gb|EEK51721.1| Pseudouridine synthase [Bacillus cereus ATCC 10876]
 gi|228599616|gb|EEK57219.1| Pseudouridine synthase [Bacillus cereus BGSC 6E1]
 gi|228605467|gb|EEK62916.1| Pseudouridine synthase [Bacillus cereus 172560W]
 gi|228633801|gb|EEK90400.1| Pseudouridine synthase [Bacillus cereus m1550]
 gi|228639179|gb|EEK95595.1| Pseudouridine synthase [Bacillus cereus BDRD-ST24]
 gi|228656826|gb|EEL12652.1| Pseudouridine synthase [Bacillus cereus BDRD-Cer4]
 gi|228662233|gb|EEL17836.1| Pseudouridine synthase [Bacillus cereus 95/8201]
 gi|228674495|gb|EEL29738.1| Pseudouridine synthase [Bacillus cereus Rock1-15]
 gi|228692800|gb|EEL46523.1| Pseudouridine synthase [Bacillus cereus Rock3-42]
 gi|228704627|gb|EEL57059.1| Pseudouridine synthase [Bacillus cereus Rock4-2]
 gi|228714069|gb|EEL65952.1| Pseudouridine synthase [Bacillus cereus F65185]
 gi|228726027|gb|EEL77264.1| Pseudouridine synthase [Bacillus cereus AH676]
 gi|228801763|gb|EEM48640.1| Pseudouridine synthase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228807871|gb|EEM54392.1| Pseudouridine synthase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228814407|gb|EEM60672.1| Pseudouridine synthase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228826779|gb|EEM72546.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228832979|gb|EEM78547.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228839480|gb|EEM84773.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228845479|gb|EEM90512.1| Pseudouridine synthase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|296323194|gb|ADH06122.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis BMB171]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|332637945|ref|ZP_08416808.1| tryptophanyl-tRNA synthetase II [Weissella cibaria KACC 11862]
          Length = 339

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 68/236 (28%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G ++P  ++    +      F D +R   +      
Sbjct: 13  PTGK-LHIGHYVGSLKNRVAMQDSGEYEPFIMIADKQA------FTDNARDPEKIHNSLL 65

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     +    N  +  E  + 
Sbjct: 66  EVALDY----LAVGIDPSKSTIFVQSAVPELSELTEYFLNLVSIARLQRNPTVKTEIQQK 121

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
                    F  F Y + QA D   L K     +   G DQ   +    +L         
Sbjct: 122 GFGESIPAGF--FIYPVSQAADI-ALFKGQVVPV---GDDQEPMLEQTRELVRTFNNYYG 175

Query: 219 -----PKLFALTS------PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                              P L      KM K+L+ AI+L+ +  + +   +    
Sbjct: 176 EGILVEPQGVFPPKGQGRIPGL--DGNAKMSKSLNNAIYLSDDEDTLWTKVKSMYT 229


>gi|319787503|ref|YP_004146978.1| pseudouridine synthase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466015|gb|ADV27747.1| pseudouridine synthase [Pseudoxanthomonas suwonensis 11-1]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 7/61 (11%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSF---GKKNHII 413
            GF  S  EA R +    + +N    +     +   D        +KL     GK+ H+ 
Sbjct: 15  TGFC-SRREADRLIAERRVTVNGQP-AGVGAVVGEGDEVRVDGQPLKLRAARPGKRRHVY 72

Query: 414 C 414
            
Sbjct: 73  I 73


>gi|229166414|ref|ZP_04294170.1| Pseudouridine synthase [Bacillus cereus AH621]
 gi|228616988|gb|EEK74057.1| Pseudouridine synthase [Bacillus cereus AH621]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|254453766|ref|ZP_05067203.1| ribosomal large subunit pseudouridine synthase [Octadecabacter
           antarcticus 238]
 gi|198268172|gb|EDY92442.1| ribosomal large subunit pseudouridine synthase [Octadecabacter
           antarcticus 238]
          Length = 328

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
              +   G  +  ++ +AG   S  EA + +++  + +N   I    L +  +D  
Sbjct: 15  PDTKAIPGDRIAKVLARAG-VASRREAEKIIEAGRVTVNGKTILTPALNVTDKDRI 69


>gi|158338042|ref|YP_001519218.1| hemolysin A [Acaryochloris marina MBIC11017]
 gi|158308283|gb|ABW29900.1| hemolysin A, putative [Acaryochloris marina MBIC11017]
          Length = 272

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNE--KLQIKLQDFDSTGNIKLSFG 407
           L+V     TS  +A+R +++  +K+N+ II     ++Q+  +      +  +S G
Sbjct: 9   LLVSLELCTSRQQAQRVIRAGEVKVNDQIIDKPGTEVQLTAEIQVKQKSPFVSRG 63


>gi|111114827|ref|YP_709445.1| tryptophanyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|110890101|gb|ABH01269.1| tryptophanyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 348

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 72/223 (32%), Gaps = 34/223 (15%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS-------INTIPF 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+   + +   ++  G       +          +  +L        +V R+    S++ 
Sbjct: 62  NV---REMVLDYLACGINPNKVSIYLQSAI---PELFELYLIFSMIVTVARLQRIPSIKD 115

Query: 162 RLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
                  + + +    Y +L + D +         L   G D   +I    +L  R    
Sbjct: 116 MSIAAGLKEIPYGLLGYPVLMSADILMAK----ANLVPVGRDNESHIEFARELARRFNHL 171

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                      +F  +SPL+      KM K+L  AI+LN +  
Sbjct: 172 YKNNFFPIPESVFTDSSPLVGICGKNKMSKSLDNAIFLNDDEN 214


>gi|330813627|ref|YP_004357866.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486722|gb|AEA81127.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 246

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 5/75 (6%)

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTG 400
           K E+   + +   +       S  E  R +++  I +N  I++     +   D       
Sbjct: 2   KKELPEKVRISKFLASYN-VGSRREIERMIENGRIYLNGEILTTPVHFVNKTDSIKLDGK 60

Query: 401 NIKLSFGKK--NHII 413
            +     K+      
Sbjct: 61  LLLFKKFKQIYKFYK 75


>gi|154498912|ref|ZP_02037290.1| hypothetical protein BACCAP_02904 [Bacteroides capillosus ATCC
           29799]
 gi|150271752|gb|EDM98978.1| hypothetical protein BACCAP_02904 [Bacteroides capillosus ATCC
           29799]
          Length = 200

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/117 (13%), Positives = 36/117 (30%), Gaps = 3/117 (2%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
               +  G ++ + K   A +++     +             ++ +     MP  +    
Sbjct: 27  KESNRNPGGQMRKKKSEYALQLSEKQKVKFVYGIMEKQFRSYYEKAAR---MPGKTGDNL 83

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            V     L   + + GFA +  EAR+ +      +N   +      +K  D      
Sbjct: 84  LVLVERRLDNAVYRLGFANTRREARQLVNHGHFTVNGQRVDIPSYLVKAGDVIEVKE 140


>gi|146310150|ref|YP_001175224.1| tryptophanyl-tRNA synthetase II [Enterobacter sp. 638]
 gi|145317026|gb|ABP59173.1| tryptophanyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 334

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 27/229 (11%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +T   G   T   LH GH    +      +  ++   L+     +         +    
Sbjct: 4   KITILTGDRPTGP-LHLGHFVGSLRQRVALQHEYQQYILVADLQGL---------TDNGS 53

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             Q+I++NI ++              T   + +    L  +  + +     +    N  +
Sbjct: 54  TPQKIRDNIPEVLA-DYLAAGIDPALTTICLQSALPALAELTALYMNIVTVARVERNPTV 112

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E  +    R   + F    Y I QA D           +   G DQ   I    ++ +
Sbjct: 113 KNEIAQKGFARSLPVGF--LVYPISQAADISAFK----AEVVPVGDDQLPMIEQTNEIVQ 166

Query: 215 RL----------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           ++              + + TS L       KM K+L   + L+    +
Sbjct: 167 KMNSLLPAPVLRHCKAMLSDTSRLPGIDGSAKMSKSLGNTLLLSASEET 215


>gi|169825170|ref|YP_001692781.1| tryptophanyl-tRNA synthetase II [Finegoldia magna ATCC 29328]
 gi|167831975|dbj|BAG08891.1| tryptophanyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 360

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 51/180 (28%), Gaps = 24/180 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G   K   ++    ++         +       +++
Sbjct: 11  PTGK-LHLGHYVGSLKNRVIMQNKGDFDKMYVMIADAQAL---------TDNFNNPDKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ENI     +   ++  G       +        L  + +  +     S    N  +  E 
Sbjct: 61  ENI---IEVALDYLSCGIDPNKVTVFVQSHVEQLTELMFYYMNLVTLSRLERNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +        + F    Y I QA D       ++  +   G DQ   +    ++      
Sbjct: 118 KQKEFGASLPVGF--LTYPISQAADIT----LFNANIVPVGEDQLPMLEQTREIVRTFNN 171


>gi|116628877|ref|YP_814049.1| tryptophanyl-tRNA synthetase II [Lactobacillus gasseri ATCC 33323]
 gi|116094459|gb|ABJ59611.1| tryptophanyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 346

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G ++P  ++    ++       D +R   + +    
Sbjct: 16  PTGK-LHIGHYIGSLKNRVKLQNEGKYEPYIMIADTQAL------TDNARDPEKIKNSLI 68

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 69  QVALDY----LAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 124

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 125 NFKDSIPVGFLN--YPVSQAADITAFK----ATVVPVGDDQEPMLEQTREIVR 171


>gi|323139327|ref|ZP_08074379.1| tryptophanyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322395393|gb|EFX97942.1| tryptophanyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 366

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 91/336 (27%), Gaps = 33/336 (9%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H+   L+    ++         +       +++ N+ 
Sbjct: 18  TGP-LHLGHFVGSLRNRVALQHSHRQYLLLADAQAL---------TDNAHDPGKVRRNVL 67

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
           ++  +    +    G T   + +    L  +  + L     +    N  +  E       
Sbjct: 68  EV-ALDYLAVGIDPGVTTICLQSALPALAELTMLYLNFVTVARLERNPTIKEEIQARGFG 126

Query: 165 REQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDLGERL 216
           R+    F    Y   QA D                    Q     +  N   G D+    
Sbjct: 127 RDIPAGF--ICYPAAQAADITAFRATIVPVGEDQAPLIEQTNEIVRRINRQAGRDILAEA 184

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLN-------KEMTSPYNFWQYWRNIDDADV 269
           +         P +      KM K+   AI L+       + +   Y    + R  D   V
Sbjct: 185 RALIPEMGRLPGV--DGKAKMSKSQGNAIPLSASDAEIAEAVNRMYTDPDHLRVSDPGRV 242

Query: 270 V-SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA-TEITTMVHGREEAEKAATAAMECF 327
             +           + D + +L+          +   +    +            A    
Sbjct: 243 EGNVVFTYLDAFDEDRDALNELKAHYRRGGLGDMTLKQRLASILREIVGPIRERRAALAR 302

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           D       + T +++  E ++ + L  +    G  +
Sbjct: 303 DPDHVLDIIRTGTLAGRERTK-VTLEEISTALGLFS 337


>gi|210634327|ref|ZP_03298063.1| hypothetical protein COLSTE_01985 [Collinsella stercoris DSM 13279]
 gi|210158854|gb|EEA89825.1| hypothetical protein COLSTE_01985 [Collinsella stercoris DSM 13279]
          Length = 402

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 59/213 (27%), Gaps = 29/213 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ+ G     L+     I    + RD +  +         
Sbjct: 89  PTGR-LHLGHYFGTLKSRVELQELGVHTNVLIADYQVI----TDRDSTENIQD-NVYNMV 142

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           I+ +              +     N            L     +    N  +  E   S 
Sbjct: 143 IDYLACGLDPDKTMIYTHSAVPACNQL------MLPFLSLVSEALLQRNPTVKAEMEASN 196

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--- 219
            +    L+ L   Y + QA D +         +   G DQ  +I     +  +       
Sbjct: 197 HE----LTGLLLTYPVHQACDIL----FCKGNVVPVGRDQLPHIELTRTIARKFNNRFGN 248

Query: 220 -----KLFALTSPLLTTASGTKMGKTLSGAIWL 247
                      +PLL    G KM K+   AI +
Sbjct: 249 VFPEVDALLSDTPLLPGLDGRKMSKSYGNAINI 281


>gi|198277516|ref|ZP_03210047.1| hypothetical protein BACPLE_03738 [Bacteroides plebeius DSM 17135]
 gi|198270014|gb|EDY94284.1| hypothetical protein BACPLE_03738 [Bacteroides plebeius DSM 17135]
          Length = 253

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +    + L   +  AG   S  EA   + +  + +N  I++    ++K  D
Sbjct: 13  DPDEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEIVTELGTKVKRSD 62


>gi|65318840|ref|ZP_00391799.1| COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Bacillus anthracis str.
           A2012]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|325679067|ref|ZP_08158661.1| pseudouridylate synthase [Ruminococcus albus 8]
 gi|324109191|gb|EGC03413.1| pseudouridylate synthase [Ruminococcus albus 8]
          Length = 244

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + +  +I ++GF  S  +A   + +  + +N   ++     +  +D      IK+   
Sbjct: 2   EKIRIQKIIAESGFC-SRRKAEEFIAAGKVTVNGRKVTLGDKALPGKDLIVVDGIKIDQP 60

Query: 408 KKN--HII 413
           KK   + I
Sbjct: 61  KKRNLYYI 68


>gi|291279397|ref|YP_003496232.1| ribosomal small subunit pseudouridine synthase A [Deferribacter
           desulfuricans SSM1]
 gi|290754099|dbj|BAI80476.1| ribosomal small subunit pseudouridine synthase A [Deferribacter
           desulfuricans SSM1]
          Length = 239

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK---NHII-CHL 416
           S  EA R +++  + +N  +I+N   +  + D       KL F KK          +
Sbjct: 22  SRREADRLIQNGFVLVNGVVITNPAEKFSINDHVVVNGEKLDFNKKVYIKFYKPIKV 78


>gi|257469264|ref|ZP_05633358.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063511|ref|ZP_07927996.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689187|gb|EFS26022.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           ulcerans ATCC 49185]
          Length = 236

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 14/75 (18%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS------IISNEKLQ-IKLQDFDSTG 400
             M +   +   G A S  E  + ++  AIK+N         +S+E    IK +  +   
Sbjct: 2   EEMRINKYLASLGIA-SRREVDKMIEEGAIKVNGEKAAPGIKVSDEDEIYIKGKKIEKNT 60

Query: 401 NIKLSFGKKNHIICH 415
                  KK + I +
Sbjct: 61  E------KKVYYILN 69


>gi|299134222|ref|ZP_07027415.1| RNA-binding S4 domain protein [Afipia sp. 1NLS2]
 gi|298590969|gb|EFI51171.1| RNA-binding S4 domain protein [Afipia sp. 1NLS2]
          Length = 695

 Score = 40.5 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +   + +AG   S  +A   +    + +N  +I++  L + ++D  
Sbjct: 367 KTGERIAKAVARAGLC-SRRDAEEWITQGRVAVNGRVINSPALDVTVRDVI 416


>gi|229074764|ref|ZP_04207783.1| Pseudouridine synthase [Bacillus cereus Rock4-18]
 gi|229096063|ref|ZP_04227037.1| Pseudouridine synthase [Bacillus cereus Rock3-29]
 gi|229102175|ref|ZP_04232885.1| Pseudouridine synthase [Bacillus cereus Rock3-28]
 gi|229115019|ref|ZP_04244430.1| Pseudouridine synthase [Bacillus cereus Rock1-3]
 gi|228668435|gb|EEL23866.1| Pseudouridine synthase [Bacillus cereus Rock1-3]
 gi|228681245|gb|EEL35412.1| Pseudouridine synthase [Bacillus cereus Rock3-28]
 gi|228687355|gb|EEL41259.1| Pseudouridine synthase [Bacillus cereus Rock3-29]
 gi|228708362|gb|EEL60516.1| Pseudouridine synthase [Bacillus cereus Rock4-18]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|297587848|ref|ZP_06946492.1| tryptophan--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574537|gb|EFH93257.1| tryptophan--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 360

 Score = 40.5 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 51/180 (28%), Gaps = 24/180 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G   K   ++    ++         +       +++
Sbjct: 11  PTGK-LHLGHYVGSLKNRVIMQNKGDFDKMYVMIADAQAL---------TDNFNNPDKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ENI     +   ++  G       +        L  + +  +     S    N  +  E 
Sbjct: 61  ENI---IEVALDYLSCGIDPNKVTIFVQSHVEQLTELMFYYMNLVTLSRLERNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +        + F    Y I QA D       ++  +   G DQ   +    ++      
Sbjct: 118 KQKEFGASLPVGF--LTYPISQAADIT----LFNANIVPVGEDQLPMLEQTREIVRTFNN 171


>gi|315037463|ref|YP_004031031.1| tryptophanyl-tRNA synthetase II [Lactobacillus amylovorus GRL 1112]
 gi|325955921|ref|YP_004286531.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus 30SC]
 gi|312275596|gb|ADQ58236.1| tryptophanyl-tRNA synthetase II [Lactobacillus amylovorus GRL 1112]
 gi|325332486|gb|ADZ06394.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus 30SC]
 gi|327182756|gb|AEA31203.1| tryptophanyl-tRNA synthetase II [Lactobacillus amylovorus GRL 1118]
          Length = 340

 Score = 40.5 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGLDPNKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 DFKDSIPVGFLN--YPVSQAADITAFK----ATIIPVGDDQEPMLEQTREIVR 167


>gi|49184399|ref|YP_027651.1| RNA pseudouridine [Bacillus anthracis str. Sterne]
 gi|165872651|ref|ZP_02217281.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0488]
 gi|167634452|ref|ZP_02392773.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0442]
 gi|167641611|ref|ZP_02399857.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0193]
 gi|170689224|ref|ZP_02880420.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0465]
 gi|170706366|ref|ZP_02896827.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0389]
 gi|177651473|ref|ZP_02934262.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0174]
 gi|190568102|ref|ZP_03021012.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis Tsiankovskii-I]
 gi|227815681|ref|YP_002815690.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. CDC 684]
 gi|229602768|ref|YP_002865978.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0248]
 gi|254682364|ref|ZP_05146225.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. CNEVA-9066]
 gi|254733779|ref|ZP_05191493.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740530|ref|ZP_05198221.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Kruger B]
 gi|254753919|ref|ZP_05205954.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Vollum]
 gi|254759015|ref|ZP_05211042.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Australia 94]
 gi|270000599|ref|YP_003329038.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Ames]
 gi|291612213|ref|YP_003541027.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178326|gb|AAT53702.1| RNA pseudouridine [Bacillus anthracis str. Sterne]
 gi|164711595|gb|EDR17142.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0488]
 gi|167510404|gb|EDR85804.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0193]
 gi|167530340|gb|EDR93066.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0442]
 gi|170128900|gb|EDS97766.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0389]
 gi|170666779|gb|EDT17546.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0465]
 gi|172082751|gb|EDT67814.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0174]
 gi|190560836|gb|EDV14811.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis Tsiankovskii-I]
 gi|224552864|gb|ACN55073.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|227004794|gb|ACP14537.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. CDC 684]
 gi|229267176|gb|ACQ48813.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0248]
 gi|269850258|gb|ACZ49988.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Ames]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|68067989|ref|XP_675913.1| tryptophan--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56495362|emb|CAH99468.1| tryptophan--tRNA ligase, putative [Plasmodium berghei]
          Length = 376

 Score = 40.5 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
              R       +    L+          Y G   ++ S+H GHL       +LQ   + P
Sbjct: 291 FIRRNIFFSHRDLDFLLNYYEKNKSFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDVFNVP 350

Query: 71  ISL 73
           + +
Sbjct: 351 LII 353


>gi|237743977|ref|ZP_04574458.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|256027410|ref|ZP_05441244.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|260497956|ref|ZP_05816073.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|289765373|ref|ZP_06524751.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|229433008|gb|EEO43220.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|260196517|gb|EEW94047.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|289716928|gb|EFD80940.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 325

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 97/338 (28%), Gaps = 45/338 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    M     LQ   +     +    S+                 + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFIDLQD-DYDGFYFIADYHSL-------------TSLTKA 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF-ES 158
           +   E    I   ++  G     + +        ++     L  + S  +   +L    S
Sbjct: 52  ETLKENTYNIVLDYLAIGLDPNKSTIFLQS----NVPEHTELTWLLSNITPVGLLERGHS 107

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +   
Sbjct: 108 YKDKIAKGIPSNTGLLTYPVLMAADIL----IYDSDIVPVGKDQKQHLEMTRDIAMKFNQ 163

Query: 219 P---KLFALTSPLLTTA-------SGTKMGKTLSGAIWLNKEMTSPYNFWQYW------- 261
               + F L  PL+           G KM K+ +  I +                     
Sbjct: 164 QYEVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFATKKKLKEQVMSIVTDSTPL 223

Query: 262 ---RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              +N D+     +A        +E+             AK  +   I        E  +
Sbjct: 224 EEPKNPDNNIAKIYALFNNIDKQNELKEKFLAGNFGYGHAKTELLNSILEYFGKAREKRE 283

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
                ++     ++       +I+ +++ +   ++ LI
Sbjct: 284 ELEKDIDYVKDVLNEGSKKARAIAIEKIKKAKEIVGLI 321


>gi|156742179|ref|YP_001432308.1| pseudouridine synthase [Roseiflexus castenholzii DSM 13941]
 gi|156233507|gb|ABU58290.1| pseudouridine synthase [Roseiflexus castenholzii DSM 13941]
          Length = 309

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             G+ L   +  A    S  EA   +    + +N   + +  +++ + 
Sbjct: 9   DPGVSLRDALTAA--LGSEGEAAWLIARGGVWVNGRRVRDPDVRLPVD 54


>gi|15888079|ref|NP_353760.1| hemolysin [Agrobacterium tumefaciens str. C58]
 gi|15155705|gb|AAK86545.1| hemolysin [Agrobacterium tumefaciens str. C58]
          Length = 250

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 19/51 (37%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            + S    L  L+V  G   S + AR  +    + +N  I++     +   
Sbjct: 2   SKTSENERLDQLLVSRGHFASRSRARDAVSRGTVSVNGKIVTKPSQTVAAN 52


>gi|325981829|ref|YP_004294231.1| 30S ribosomal protein S4 [Nitrosomonas sp. AL212]
 gi|325531348|gb|ADZ26069.1| ribosomal protein S4 [Nitrosomonas sp. AL212]
          Length = 208

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  LL L+           GF  S +EAR+ ++ N I IN S ++    ++K  D
Sbjct: 89  GDNLLQLLEGRLDNVAFHMGFGASRSEARQIVRHNGILINGSRVNIPSYRVKAGD 143


>gi|296126235|ref|YP_003633487.1| RNA-binding S4 domain protein [Brachyspira murdochii DSM 12563]
 gi|296018051|gb|ADG71288.1| RNA-binding S4 domain protein [Brachyspira murdochii DSM 12563]
          Length = 381

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           + K +    + L+ +I+++GFA S     + + S  I++NN +I +   ++K  D  S  
Sbjct: 1   MKKQKNEEAVRLVKVILESGFA-SRRNCEKAIMSGRIRVNNEVILDPAYRVKESDSVSID 59

Query: 401 NIKLSFGKKNH 411
              +   +K +
Sbjct: 60  RKLIERQRKRY 70


>gi|154503047|ref|ZP_02040107.1| hypothetical protein RUMGNA_00869 [Ruminococcus gnavus ATCC 29149]
 gi|153796288|gb|EDN78708.1| hypothetical protein RUMGNA_00869 [Ruminococcus gnavus ATCC 29149]
          Length = 71

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           +I   E    + L   +  AG   S  EA+  ++   + +N  +
Sbjct: 3   TIKLRETDEFIKLGQALKAAGLVESGVEAKEVIQDGMVTVNGEV 46


>gi|220907439|ref|YP_002482750.1| hemolysin A [Cyanothece sp. PCC 7425]
 gi|219864050|gb|ACL44389.1| hemolysin A [Cyanothece sp. PCC 7425]
          Length = 267

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 21/40 (52%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V      S  +A+R +++  +++N  +I     ++ +Q
Sbjct: 9   LLVDRQLCDSRQQAQRLIRAGEVRVNQQVIDKPGTEVDVQ 48


>gi|163939386|ref|YP_001644270.1| pseudouridine synthase [Bacillus weihenstephanensis KBAB4]
 gi|229132378|ref|ZP_04261232.1| Pseudouridine synthase [Bacillus cereus BDRD-ST196]
 gi|163861583|gb|ABY42642.1| pseudouridine synthase [Bacillus weihenstephanensis KBAB4]
 gi|228651084|gb|EEL07065.1| Pseudouridine synthase [Bacillus cereus BDRD-ST196]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|42780671|ref|NP_977918.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           ATCC 10987]
 gi|47569145|ref|ZP_00239833.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           G9241]
 gi|206978260|ref|ZP_03239138.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           H3081.97]
 gi|217959048|ref|YP_002337596.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH187]
 gi|222095202|ref|YP_002529262.1| ribosomal large subunit pseudouridine synthase b [Bacillus cereus
           Q1]
 gi|228984651|ref|ZP_04144824.1| Pseudouridine synthase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229138265|ref|ZP_04266860.1| Pseudouridine synthase [Bacillus cereus BDRD-ST26]
 gi|229155139|ref|ZP_04283251.1| Pseudouridine synthase [Bacillus cereus ATCC 4342]
 gi|229195772|ref|ZP_04322532.1| Pseudouridine synthase [Bacillus cereus m1293]
 gi|300117500|ref|ZP_07055290.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           SJ1]
 gi|301053111|ref|YP_003791322.1| pseudouridylate synthase [Bacillus anthracis CI]
 gi|42736591|gb|AAS40526.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           ATCC 10987]
 gi|47554216|gb|EAL12579.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           G9241]
 gi|206743509|gb|EDZ54938.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           H3081.97]
 gi|217066494|gb|ACJ80744.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH187]
 gi|221239260|gb|ACM11970.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           Q1]
 gi|228587669|gb|EEK45727.1| Pseudouridine synthase [Bacillus cereus m1293]
 gi|228628266|gb|EEK84981.1| Pseudouridine synthase [Bacillus cereus ATCC 4342]
 gi|228645157|gb|EEL01394.1| Pseudouridine synthase [Bacillus cereus BDRD-ST26]
 gi|228775045|gb|EEM23438.1| Pseudouridine synthase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|298725335|gb|EFI65987.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           SJ1]
 gi|300375280|gb|ADK04184.1| pseudouridylate synthase [Bacillus cereus biovar anthracis str. CI]
 gi|324325588|gb|ADY20848.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|227514190|ref|ZP_03944239.1| tryptophan--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087453|gb|EEI22765.1| tryptophan--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 337

 Score = 40.5 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q++G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYVGSLRERVKMQESGEYDPFIMIADQQAL------TDNARDPEKIRRSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 65  EVALDY----LAVGLDPAKSTLFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              R     F  F Y + Q  D           L   G DQ   +    ++  
Sbjct: 121 NFNRSIPAGF--FTYPVSQTADITAFK----ANLVPVGDDQEPMLEQAREIVR 167


>gi|281421738|ref|ZP_06252737.1| tryptophan--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404233|gb|EFB34913.1| tryptophan--tRNA ligase [Prevotella copri DSM 18205]
          Length = 361

 Score = 40.5 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 62/233 (26%), Gaps = 32/233 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++  +    ++ R+ +    + 
Sbjct: 11  PTGK-LHLGHYIGSLQRRVQLQNAGDFDRMFVFMADVQALTDNADNPEKIRQNITEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +     +                   L  +    +     S    N  +  E   
Sbjct: 70  YLSAGLDPQKCTLYIQSMIPE----------LAELTTYLMNLISVSRVQRNPTVKTEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    L F  F Y + QA D               G DQ   +    +L  R     
Sbjct: 120 RNFEANIPLGF--FCYPVSQAADITAFK----ATTVPAGEDQEPMLEVTRELVRRFNQTY 173

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
              L  P +             T    KM K+L   I+++ +  + +   +  
Sbjct: 174 APVLVEPEILLPEIACCRRLPGTDGKEKMSKSLGNCIYMSDDEKTVWKKVKKM 226


>gi|126697668|ref|YP_001086565.1| 30S ribosomal protein S4 [Clostridium difficile 630]
 gi|254973759|ref|ZP_05270231.1| 30S ribosomal protein S4 [Clostridium difficile QCD-66c26]
 gi|255091149|ref|ZP_05320627.1| 30S ribosomal protein S4 [Clostridium difficile CIP 107932]
 gi|255099260|ref|ZP_05328237.1| 30S ribosomal protein S4 [Clostridium difficile QCD-63q42]
 gi|255305043|ref|ZP_05349215.1| 30S ribosomal protein S4 [Clostridium difficile ATCC 43255]
 gi|255312803|ref|ZP_05354386.1| 30S ribosomal protein S4 [Clostridium difficile QCD-76w55]
 gi|255515562|ref|ZP_05383238.1| 30S ribosomal protein S4 [Clostridium difficile QCD-97b34]
 gi|255648657|ref|ZP_05395559.1| 30S ribosomal protein S4 [Clostridium difficile QCD-37x79]
 gi|255654190|ref|ZP_05399599.1| 30S ribosomal protein S4 [Clostridium difficile QCD-23m63]
 gi|260681874|ref|YP_003213159.1| 30S ribosomal protein S4 [Clostridium difficile CD196]
 gi|260685472|ref|YP_003216605.1| 30S ribosomal protein S4 [Clostridium difficile R20291]
 gi|296449771|ref|ZP_06891540.1| 30S ribosomal protein S4 [Clostridium difficile NAP08]
 gi|296877835|ref|ZP_06901857.1| 30S ribosomal protein S4 [Clostridium difficile NAP07]
 gi|122974220|sp|Q18CI6|RS4_CLOD6 RecName: Full=30S ribosomal protein S4
 gi|115249105|emb|CAJ66916.1| 30S ribosomal protein S4 [Clostridium difficile]
 gi|260208037|emb|CBA60237.1| 30S ribosomal protein S4 [Clostridium difficile CD196]
 gi|260211488|emb|CBE01627.1| 30S ribosomal protein S4 [Clostridium difficile R20291]
 gi|296261369|gb|EFH08195.1| 30S ribosomal protein S4 [Clostridium difficile NAP08]
 gi|296431135|gb|EFH16960.1| 30S ribosomal protein S4 [Clostridium difficile NAP07]
          Length = 207

 Score = 40.5 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  LL+L+ +         G A+S  EAR+ +      +N + +    L +K+ D   
Sbjct: 87  KAGENLLSLLERRLDNVVYRMGLASSRKEARQLVTHGHFTLNGNKVDIPSLIVKVGDVIE 146

Query: 399 TGN 401
              
Sbjct: 147 VKE 149


>gi|72161417|ref|YP_289074.1| 30S ribosomal protein S4 [Thermobifida fusca YX]
 gi|90101732|sp|Q47R66|RS4_THEFY RecName: Full=30S ribosomal protein S4
 gi|71915149|gb|AAZ55051.1| SSU ribosomal protein S4P [Thermobifida fusca YX]
          Length = 203

 Score = 40.5 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 44/125 (35%)

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           T   +   ++     G+     ++  +         ++       +  +   +  +++  
Sbjct: 19  TRKAVKYFEKRPYPPGEHGRRVRRSTSDYAVRQAEKQKLRWYYDLSEKQLARVYENAKKR 78

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  +  +      + L T++++AGFA S   AR+ +    I ++   +     Q+K    
Sbjct: 79  PGRTGEEMIAELELRLATVLLRAGFAASIYAARQFINHGHITVDGKKVDIPSYQVKPGQI 138

Query: 397 DSTGN 401
            S   
Sbjct: 139 VSVRE 143


>gi|298346265|ref|YP_003718952.1| tryptophan--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|315654860|ref|ZP_07907765.1| tryptophan--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|298236326|gb|ADI67458.1| tryptophan--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|315490821|gb|EFU80441.1| tryptophan--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 375

 Score = 40.5 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 72/224 (32%), Gaps = 29/224 (12%)

Query: 1   MPAFKSDFLSILSERGFI--HQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQ 56
           M   ++   S    R  +   Q ++      + +   G      G   T   LH GH   
Sbjct: 1   MTKDENQVASETEVRATLKAAQETSKAIAADIAAGNVGKYRILTGDRPTG-FLHIGHYFG 59

Query: 57  LMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-EKIKGIFSSFI 114
            +     LQ  G     L+                 +++  ++   N+ E +  + + ++
Sbjct: 60  TLKTRVDLQNLGIDTTVLIADY--------------QVITDRDNLGNVREYVLNLVADYL 105

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLE 173
             G     + +  +          ++L    S  +   +    +V++ L+   + +S L 
Sbjct: 106 AAGIDPEKSTIFCHSQI---PAIHEMLVIFLSLVTEAELHRNPTVKAELEAAARPMSGLL 162

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             Y + QA D +         L   G DQ  ++     L +R  
Sbjct: 163 LTYPVHQAADILCAK----ANLVPVGQDQLPHLEQARVLAKRFN 202


>gi|229058206|ref|ZP_04196594.1| Pseudouridine synthase [Bacillus cereus AH603]
 gi|228720070|gb|EEL71654.1| Pseudouridine synthase [Bacillus cereus AH603]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|114569169|ref|YP_755849.1| pseudouridine synthase, Rsu [Maricaulis maris MCS10]
 gi|114339631|gb|ABI64911.1| Pseudouridine synthase, Rsu [Maricaulis maris MCS10]
          Length = 372

 Score = 40.5 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 7/58 (12%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +   + +AG   S  E  R ++   +K++   +     ++   +           GK+
Sbjct: 11  IAKFLARAG-VASRREVERMIEGGRVKVDGKTLDTPAFKVTGSEHIEVD------GKR 61


>gi|302380459|ref|ZP_07268927.1| tryptophan--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311770|gb|EFK93783.1| tryptophan--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 360

 Score = 40.5 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 51/180 (28%), Gaps = 24/180 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G   K   ++    ++         +       +++
Sbjct: 11  PTGK-LHLGHYVGSLKNRVIMQNKGDFDKMYVMIADAQAL---------TDNFNNPDKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ENI     +   ++  G       +        L  + +  +     S    N  +  E 
Sbjct: 61  ENI---IEVALDYLSCGIDPNKVTIFVQSHVEQLTELMFYYMNLVTLSRLERNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +        + F    Y I QA D       ++  +   G DQ   +    ++      
Sbjct: 118 KQKEFGASLPVGF--LTYPISQAADIT----LFNANIVPVGEDQLPMLEQTREIVRTFNN 171


>gi|218896501|ref|YP_002444912.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           G9842]
 gi|228900151|ref|ZP_04064384.1| Pseudouridine synthase [Bacillus thuringiensis IBL 4222]
 gi|228907203|ref|ZP_04071064.1| Pseudouridine synthase [Bacillus thuringiensis IBL 200]
 gi|228938683|ref|ZP_04101288.1| Pseudouridine synthase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228964544|ref|ZP_04125654.1| Pseudouridine synthase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228971565|ref|ZP_04132189.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978176|ref|ZP_04138554.1| Pseudouridine synthase [Bacillus thuringiensis Bt407]
 gi|218545922|gb|ACK98316.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           G9842]
 gi|228781648|gb|EEM29848.1| Pseudouridine synthase [Bacillus thuringiensis Bt407]
 gi|228788224|gb|EEM36179.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228795144|gb|EEM42640.1| Pseudouridine synthase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228821059|gb|EEM67079.1| Pseudouridine synthase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228852424|gb|EEM97217.1| Pseudouridine synthase [Bacillus thuringiensis IBL 200]
 gi|228859557|gb|EEN03984.1| Pseudouridine synthase [Bacillus thuringiensis IBL 4222]
 gi|326939191|gb|AEA15087.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|229010875|ref|ZP_04168072.1| Pseudouridine synthase [Bacillus mycoides DSM 2048]
 gi|228750549|gb|EEM00378.1| Pseudouridine synthase [Bacillus mycoides DSM 2048]
          Length = 242

 Score = 40.5 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|317509130|ref|ZP_07966756.1| tryptophanyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316252566|gb|EFV12010.1| tryptophanyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 339

 Score = 40.5 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 45/347 (12%), Positives = 94/347 (27%), Gaps = 57/347 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T SS+H G+    +  +   +  ++ +  +    S             +    +  
Sbjct: 9   GIQATGSSVHLGNYLGAIKQWVELQHDYEALYFIPDLHS-------------ITTPHDPA 55

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E      +  +  G       +        + +   +L  +  F   +RM  F+   
Sbjct: 56  QLRESTLQYIAQLLALGLDPAQCTIFVQSHVPANAQLAWVLSCLTGFGEASRMTQFKD-- 113

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              K+ +  S   F Y  L A D +     Y   L   G DQ  ++    +L ER     
Sbjct: 114 KSDKQGEQTSVGLFTYPCLMAADILA----YQAELVPVGDDQSQHLELTRNLAERFNHRF 169

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
            + F +    L  A        L        +  S  +    + +        F   +T 
Sbjct: 170 GQTFVVPKARLVKAGARVY--DLREPTKKMSKSASSDSGIVNFMDDPKTSAKKFRSAVTD 227

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           +             +    AK  ++      +      + A   A++       +  +  
Sbjct: 228 MDGE---------VRFDPAAKPGVSN--LLAIFAALTGQTAEEVALKYQGGGYGALKV-- 274

Query: 339 ISISKDEVSRGMGLLTLIVK---------AGFATSTNEARRHLKSNA 376
                        L    V+          G+  + +E  R +    
Sbjct: 275 ------------DLADAFVEFAAPVRERTLGWLENRSELDRIISEGG 309


>gi|225620831|ref|YP_002722089.1| pseudouridine synthase [Brachyspira hyodysenteriae WA1]
 gi|225215651|gb|ACN84385.1| pseudouridine synthase [Brachyspira hyodysenteriae WA1]
          Length = 359

 Score = 40.5 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           + K +    + L+ +I+++GFA S     + + S  +++NN +I +   ++K  D  S  
Sbjct: 1   MKKQQNEEAVRLVKVILESGFA-SRRNCEKAIMSGRVRVNNQVILDPAYRVKEDDSVSID 59

Query: 401 NIKLSFGKKNH 411
              +    K +
Sbjct: 60  RELIKRQTKRY 70


>gi|239996313|ref|ZP_04716837.1| 30S ribosomal protein S4 [Alteromonas macleodii ATCC 27126]
 gi|332142182|ref|YP_004427920.1| 30S ribosomal protein S4 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226697796|sp|B4RT52|RS4_ALTMD RecName: Full=30S ribosomal protein S4
 gi|327552204|gb|AEA98922.1| 30S ribosomal protein S4 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 206

 Score = 40.5 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++  EAR+ +   AI +N  +++     +
Sbjct: 78  EAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAIMVNGQVVNIPSFNV 137

Query: 392 KLQDFDSTGN 401
             +D  S   
Sbjct: 138 SAEDVVSVRE 147


>gi|313143038|ref|ZP_07805231.1| hemolysin [Helicobacter cinaedi CCUG 18818]
 gi|313128069|gb|EFR45686.1| hemolysin [Helicobacter cinaedi CCUG 18818]
          Length = 234

 Score = 40.5 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSF 406
             +S  +A+  ++S  +K+N +++      ++  D     + ++ LS 
Sbjct: 4   LCSSRTKAKEAIESGCVKVNGAVVKKGSFLLEKDDEVGVDSKDLLLSR 51


>gi|218532076|ref|YP_002422892.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum
           CM4]
 gi|218524379|gb|ACK84964.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum
           CM4]
          Length = 674

 Score = 40.5 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +   +     G  +   I +AG A S  +A   +++  + +N  ++++  + +   D 
Sbjct: 9   PAVPADQPAAPEGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGKVLTSPAINVTDSDR 67

Query: 397 D 397
            
Sbjct: 68  I 68


>gi|294672844|ref|YP_003573460.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           ruminicola 23]
 gi|294472710|gb|ADE82099.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           ruminicola 23]
          Length = 449

 Score = 40.5 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 1/96 (1%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A    +     +          + +  + L   +  AG   S  EA   +++  + +
Sbjct: 184 QRTADYDPNAKYSMKKRIEYKEINYDPNEPLRLNKFLANAGVC-SRREADEFIQAGVVSV 242

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           N  I++    +I   D     +  ++  KK +++ +
Sbjct: 243 NGEIVTELGTKILRTDVVKFHDQPVNIEKKVYVLLN 278


>gi|285017365|ref|YP_003375076.1| pseudouridylate synthase [Xanthomonas albilineans GPE PC73]
 gi|283472583|emb|CBA15088.1| probable pseudouridylate synthase protein [Xanthomonas albilineans]
          Length = 275

 Score = 40.5 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           GL   + K G   S  EA R + +  + ++  I+++ +  I
Sbjct: 33  GLARTLSKLGLC-SRTEAVRWIAAGRVAVDGRIVTDPEFPI 72


>gi|77361711|ref|YP_341286.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis TAC125]
 gi|90101708|sp|Q3IJJ5|RS4_PSEHT RecName: Full=30S ribosomal protein S4
 gi|76876622|emb|CAI87844.1| 30S ribosomal subunit protein S4 [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 206

 Score = 40.5 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++  EAR+ +   AI +N  +++     I
Sbjct: 78  EAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAILVNGRVVNVPSYVI 137

Query: 392 KLQD 395
             +D
Sbjct: 138 APED 141


>gi|254525127|ref|ZP_05137182.1| pseudouridylate synthase [Stenotrophomonas sp. SKA14]
 gi|219722718|gb|EED41243.1| pseudouridylate synthase [Stenotrophomonas sp. SKA14]
          Length = 240

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           GL  ++ KAG   S +EA R +    ++++  I+ + +  I
Sbjct: 4   GLARVLSKAGVC-SRSEAARWIAEGRVRVSGRIVRDPEFPI 43


>gi|190572990|ref|YP_001970835.1| putative RNA pseudouridine synthase [Stenotrophomonas maltophilia
           K279a]
 gi|190010912|emb|CAQ44521.2| putative RNA pseudouridine synthase [Stenotrophomonas maltophilia
           K279a]
          Length = 277

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           GL  ++ KAG   S +EA R +    ++++  I+ + +  I
Sbjct: 41  GLARVLSKAGVC-SRSEAARWIAEGRVRVSGRIVRDPEFPI 80


>gi|194364580|ref|YP_002027190.1| pseudouridine synthase [Stenotrophomonas maltophilia R551-3]
 gi|194347384|gb|ACF50507.1| pseudouridine synthase [Stenotrophomonas maltophilia R551-3]
          Length = 268

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           GL  ++ KAG   S +EA R +    ++++  I+ + +  I
Sbjct: 32  GLARVLSKAGVC-SRSEAARWIAEGRVRVSGRIVRDPEFPI 71


>gi|39934240|ref|NP_946516.1| pseudouridine synthase Rsu [Rhodopseudomonas palustris CGA009]
 gi|39648088|emb|CAE26608.1| Pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Rhodopseudomonas palustris CGA009]
          Length = 731

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                  G  +  ++ +AG   S  +A   +    + +N  +I +  L +K  D  
Sbjct: 397 PAKSDKAGERIAKVVARAGLC-SRRDAEAWITEGRVTVNGKVIDSPALDVKASDII 451


>gi|212218098|ref|YP_002304885.1| 30S ribosomal protein S4 [Coxiella burnetii CbuK_Q154]
 gi|226697829|sp|B6J5F6|RS4_COXB1 RecName: Full=30S ribosomal protein S4
 gi|212012360|gb|ACJ19740.1| SSU ribosomal protein S4P [Coxiella burnetii CbuK_Q154]
          Length = 206

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 8/60 (13%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S G  LL L+           GF+ +  EAR+ +   AI +N  +++    Q+K  D   
Sbjct: 85  STGDNLLKLLESRLDNVVYRMGFSATRAEARQLISHKAILVNGEVVNIPSYQVKPGDIIE 144


>gi|146278267|ref|YP_001168426.1| RNA-binding S4 domain-containing protein [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145556508|gb|ABP71121.1| RNA-binding S4 domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 466

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + + G  +  ++ +AG   S  +A R ++   + +N   I +  L +  +D  
Sbjct: 3   DSTDGERIAKVLSRAG-VASRRDAERMIELGRVAVNGRTIDSPALNVGPKDRI 54


>gi|11496535|ref|NP_044545.1| ribosomal protein S4 [Toxoplasma gondii RH]
 gi|74828576|sp|Q9XQQ7|RR4_TOXGO RecName: Full=Apicoplast 30S ribosomal protein S4
 gi|5231238|gb|AAD41132.1|U87145_1 ribosomal protein S4 [Toxoplasma gondii]
          Length = 198

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 12/82 (14%)

Query: 341 ISKDEVSRGMGLLTL-----IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I   ++   + ++ L     I + GFA S N+AR+ +    I IN+ ++      +  +D
Sbjct: 71  IKLLKIFNLIQIIELRLDATIFRLGFAKSINQARQLITHGFIFINSILVKKPSFILTEKD 130

Query: 396 FDSTGNIKLSFGKKNHIICHLC 417
                        K   I  +C
Sbjct: 131 LIYINP-------KKFTIILIC 145


>gi|289597181|ref|YP_003483877.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
           boonei T469]
 gi|289534968|gb|ADD09315.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
           boonei T469]
          Length = 236

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
             + LL ++ +  G A++  EA++ L S  +K++  ++ + K  I   D  S G+I
Sbjct: 36  ESIPLLVVLREILGIASNKREAKKILNSRKVKVDGRVVRDVKFPIGFMDVISIGDI 91


>gi|260102227|ref|ZP_05752464.1| tryptophan-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083968|gb|EEW68088.1| tryptophan-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 340

 Score = 40.5 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPSKSTIYVQSQIPALFELTSYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 DFKDSIPVGFLN--YPVSQAADITAFK----ATIVPVGDDQEPMLEQTREIVR 167


>gi|226365709|ref|YP_002783492.1| tryptophanyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226244199|dbj|BAH54547.1| tryptophanyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 344

 Score = 40.5 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 75/243 (30%), Gaps = 35/243 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                 G   TA S H G+      L     LQ         +    +            
Sbjct: 12  KPRVLSGIQPTADSFHLGNFLG--ALQQWVPLQD-DFDAFYFIPDLHA------------ 56

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            +  +Q+ +E   + K   +  +  G     A +          +   +L  I  F   +
Sbjct: 57  -ITVAQDPKELRRRTKIAVAQLLALGIDPDRATLFVQSQVPEHAQLAWVLNCITGFGEAS 115

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +  ++ S   F Y +L A D + L +     +   G DQ  ++    D
Sbjct: 116 RMTQFKD-KSAKQGSENASVGLFTYPVLMAADIL-LYRPQRVPV---GEDQRQHLELARD 170

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L +R      K F +    +   +           KM K+      L   +  P    + 
Sbjct: 171 LAQRFNTRFGKAFVIPEAQIIKGTAKIYDLQDPTSKMSKSGPSPAGLINLLDDPKVSAKK 230

Query: 261 WRN 263
            ++
Sbjct: 231 IKS 233


>gi|328463917|gb|EGF35435.1| tryptophanyl-tRNA synthetase II [Lactobacillus helveticus MTCC
           5463]
          Length = 340

 Score = 40.5 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPSKSTIYVQSQIPALFELTSYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 DFKDSIPVGFLN--YPVSQAADITAFK----ATIVPVGDDQEPMLEQTREIVR 167


>gi|268318769|ref|YP_003292425.1| hypothetical protein FI9785_274 [Lactobacillus johnsonii FI9785]
 gi|262397144|emb|CAX66158.1| trpS [Lactobacillus johnsonii FI9785]
          Length = 342

 Score = 40.5 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYDPYIMIADTQAL------TDNARDPEKIKNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 NFKDSIPIGFLN--YPVSQAADITAFK----ATVIPVGDDQEPMLEQTREIVR 167


>gi|256370719|ref|YP_003108544.1| tryptophanyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009511|gb|ACU52871.1| tryptophanyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 324

 Score = 40.5 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 42/329 (12%), Positives = 94/329 (28%), Gaps = 47/329 (14%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L  +ML  +   + +  +   L+    S     S ++   +    +     +    
Sbjct: 15  HIGNLLGVMLPTIKNSKTSLKEVFILIADFHSFTNIKSIKNI--KNNTYKIAAAWLACG- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                       ++D   +    W  +            FF   R+    S +S+     
Sbjct: 72  --LKLDKAILYRQSDIPQITELFWFLN-----------CFFPYQRLKLSHSFKSKNNINT 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            L    F Y IL A D +     +D ++   G DQ  +I     + +++          P
Sbjct: 119 GL----FTYPILMAADIL----LFDSKIVFVGKDQLQHIEITRKIAKKINNKIKNLFLIP 170

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW----------RNIDDAD 268
                     +    G KM K+    I +                        +N+ +  
Sbjct: 171 EAKIKKTSMAIPGIDGYKMSKSRKNTIDIFSSKEKIKTQIMKIHTSSNSTFSKKNLKNEI 230

Query: 269 VVSFAKRLTT--LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           + +  K L           ++ +       +AK+ +   I        +        ++ 
Sbjct: 231 IYNIYKLLFNKKYFFLFEKKLMEDPSFGYEKAKRKLYKHILCFFSNERKKFNFYIKNIKI 290

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            D  +         I+ + +++   +  L
Sbjct: 291 IDSILEKGAQKARKIAINTINKVRSVFNL 319


>gi|71905986|ref|YP_283573.1| 30S ribosomal protein S4 [Dechloromonas aromatica RCB]
 gi|90101686|sp|Q47J78|RS4_DECAR RecName: Full=30S ribosomal protein S4
 gi|71845607|gb|AAZ45103.1| SSU ribosomal protein S4P [Dechloromonas aromatica RCB]
          Length = 209

 Score = 40.5 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 339 ISISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
               + +   G  LL L+           GF  S +E+R+ ++ N I +N   ++     
Sbjct: 80  AEADRRKGQTGENLLQLLEARLDSVAYRMGFGASRSESRQVVRHNGILVNGKRVNIPSFI 139

Query: 391 IKLQD 395
           +K  D
Sbjct: 140 VKPGD 144


>gi|76803069|ref|YP_331164.1| 30S ribosomal protein S4e [Natronomonas pharaonis DSM 2160]
 gi|121731890|sp|Q3IMX6|RS4E_NATPD RecName: Full=30S ribosomal protein S4e
 gi|76558934|emb|CAI50530.1| ribosomal protein S4.eR [Natronomonas pharaonis DSM 2160]
          Length = 237

 Score = 40.5 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G+ LL ++    G+  S  EAR  L+ ++I IN + +S+E+  + + D  
Sbjct: 34  EEGVPLLIVLRDVLGYVDSKKEARYALEQDSILINGTAVSDERRPVGMFDIL 85


>gi|304389969|ref|ZP_07371926.1| tryptophan--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315657220|ref|ZP_07910104.1| tryptophan--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|304326862|gb|EFL94103.1| tryptophan--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315492323|gb|EFU81930.1| tryptophan--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 375

 Score = 40.5 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 25/177 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     L+                 +++  ++   N
Sbjct: 48  PTG-FLHIGHYFGTLKTRVDLQNLGIDTTVLIADY--------------QVITDRDNLGN 92

Query: 103 I-EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           + E +  + + ++  G     + +  +          ++L    S  +   +    +V++
Sbjct: 93  VREYVLNLVADYLAAGIDPEKSTIFCHSQI---PAIHEMLVIFLSLVTEAELHRNPTVKA 149

Query: 162 RLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            L+   + +S L   Y + QA D +         L   G DQ  ++     L +R  
Sbjct: 150 ELEAAARPMSGLLLTYPVHQAADILCAK----ANLVPVGQDQLPHLEQARVLAKRFN 202


>gi|254563182|ref|YP_003070277.1| hypothetical protein METDI4845 [Methylobacterium extorquens DM4]
 gi|254270460|emb|CAX26460.1| conserved hypothetical protein; putative pseudouridine
           synthase-like domain [Methylobacterium extorquens DM4]
          Length = 669

 Score = 40.5 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +   +     G  +   I +AG A S  +A   +++  + +N  ++++  + +   D 
Sbjct: 9   PAVPADQPATPEGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGKVLTSPAINVTDSDR 67

Query: 397 D 397
            
Sbjct: 68  I 68


>gi|240140668|ref|YP_002965148.1| hypothetical protein MexAM1_META1p4234 [Methylobacterium extorquens
           AM1]
 gi|240010645|gb|ACS41871.1| conserved hypothetical protein with putative pseudouridine
           synthase-like domain [Methylobacterium extorquens AM1]
          Length = 669

 Score = 40.5 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +   +     G  +   I +AG A S  +A   +++  + +N  ++++  + +   D 
Sbjct: 9   PAVPADQPATPEGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGKVLTSPAINVTDSDR 67

Query: 397 D 397
            
Sbjct: 68  I 68


>gi|161349358|ref|ZP_02096742.1| ribosomal protein S4 [Coxiella burnetii 'MSU Goat Q177']
 gi|164601574|gb|EDQ95165.1| ribosomal protein S4 [Coxiella burnetii 'MSU Goat Q177']
          Length = 206

 Score = 40.5 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 8/60 (13%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S G  LL L+           GF+ +  EAR+ +   AI +N  +++    Q+K  D   
Sbjct: 85  STGDNLLKLLESRLDNVVYRMGFSATRAEARQLISHKAILVNGEVVNIPSYQVKPGDIIE 144


>gi|239623806|ref|ZP_04666837.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521837|gb|EEQ61703.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 364

 Score = 40.5 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 20/197 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNSGGFDEIYIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYLACGLDPAKSVLFIQSQIPELCEMSFYYMDLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  +  +  
Sbjct: 120 RGFEASIPVGF--FTYPISQAADITAFK----ATTVPVGEDQAPMIEQTREIVHKFNSVY 173

Query: 221 LFALTSPLLTTASGTKM 237
              L  P +        
Sbjct: 174 GETLVEPDILLPDNKAC 190


>gi|329118188|ref|ZP_08246898.1| S4 RNA-binding domain protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465609|gb|EGF11884.1| S4 RNA-binding domain protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 79

 Score = 40.5 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 24/62 (38%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           E    + L  L+  A  A S  +A+  +    ++ N +  + +  +I+  D    G   L
Sbjct: 8   EDQEYIALCDLLKLAALAHSGGQAKALIAEGKVRRNGATETRKTAKIRGGDTIECGGAVL 67

Query: 405 SF 406
             
Sbjct: 68  QV 69


>gi|294673313|ref|YP_003573929.1| tryptophan--tRNA ligase [Prevotella ruminicola 23]
 gi|294474118|gb|ADE83507.1| tryptophan--tRNA ligase [Prevotella ruminicola 23]
          Length = 362

 Score = 40.5 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 73/237 (30%), Gaps = 36/237 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNQGDFDRMFVFMADVQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESV 159
           +NI     +   ++  G       +          +    L  + S   V R       V
Sbjct: 61  QNI---IEVALDYLAAGLDPEKCTLFIQSQIPELAELTTYLMNLVSVSRVQRNPTVKTEV 117

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           + R    +S+    F Y + QA D       +       G DQ   +    +L  R    
Sbjct: 118 KMRGFEGESIPLGFFCYPVSQAADIT----LFKATTVPAGEDQEPMLEVTRELVRRFNQI 173

Query: 218 TPKLFALTSPLLT----------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              +    + +L           T    KM K+L   I+L+    +  + WQ  R++
Sbjct: 174 YAPVLVEPNIMLPENLTARRLPGTDGKEKMSKSLGNCIYLS---DTAEDVWQKVRSM 227


>gi|222529280|ref|YP_002573162.1| hemolysin A [Caldicellulosiruptor bescii DSM 6725]
 gi|222456127|gb|ACM60389.1| hemolysin A [Caldicellulosiruptor bescii DSM 6725]
          Length = 269

 Score = 40.5 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+V+ G   S  +AR  + S  + +NN  I      I  
Sbjct: 8   LLVEKGLVESREKARALILSGNVYVNNQKIEKAGEMIDE 46


>gi|209548167|ref|YP_002280084.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209533923|gb|ACI53858.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 248

 Score = 40.5 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 18/48 (37%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
                L  L+V  G   S + AR  ++   ++I   +++     I   
Sbjct: 4   QNSQRLDQLLVSRGLFASRSRARDAVQRGTVRIAGQVVTKAGALIGDD 51


>gi|311279813|ref|YP_003942044.1| tryptophanyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749008|gb|ADO48760.1| tryptophanyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 339

 Score = 40.1 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 49/174 (28%), Gaps = 17/174 (9%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+     +         +    + +++  NI
Sbjct: 17  PTGP-LHLGHYVGSLRQRVALQHQHPQYILIADLQGL---------TDNGSQPEKVVNNI 66

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +      +   + +    L  +  + +     S    N  +  E ++   
Sbjct: 67  LEVMA-DYLAVGIRPDLSTICLQSALPALAELTMLYMNIVTVSRVERNPTVKNEILQKGF 125

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            R     F    Y I QA D               G DQ   I    ++  ++ 
Sbjct: 126 SRSLPTGF--LVYPISQAADITAF----GADRVPVGDDQLPMIEQTNEIVHKMN 173


>gi|170289928|ref|YP_001736744.1| tryptophanyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174008|gb|ACB07061.1| tryptophanyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 390

 Score = 40.1 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 66/252 (26%), Gaps = 21/252 (8%)

Query: 3   AFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
                +L I   R F     +    L           Y G   +   +H GH+    +  
Sbjct: 45  ELTKSYLPIFLRRKFFFSHRDYDLVLKDYEEGRGFFLYTGRGPSGP-MHIGHIIPFYMTA 103

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W Q+        +      + D    DE   +    E ++               G    
Sbjct: 104 WFQEK-FDVNLYI-----QVTD----DEKFIIHPEFEFEDTKRWALQNIFDIAAVGFNPD 153

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  +          +       +++ ++F + R+     +S       Y  +QA
Sbjct: 154 KTFIFQNSEYT---------KIYEIAIPISKKITFSTARAVFGFNESSKIGIIFYPAIQA 204

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                  +       +     W       +     KT  +     P LT  SG       
Sbjct: 205 APTFFERRRCLIPAAIDQDPYWRIQRDIAESLGYFKTAAIHGKFFPPLTGISGKMSASMP 264

Query: 242 SGAIWLNKEMTS 253
             A++L  +  +
Sbjct: 265 ETAVYLTDDPET 276


>gi|78358646|ref|YP_390095.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78221051|gb|ABB40400.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 329

 Score = 40.1 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 31/222 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESR-RMMRSQ 97
           G   T  +LH GH   +  L    +  H  +    +    ++  D  F D +R +    +
Sbjct: 9   GMRPTG-ALHLGHYFGV--LKNWVEMQHEMEAFFFVADWHALTSD--FADPTRIKGFVPE 63

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            + + +             G       +          +   LL  I     + R  +++
Sbjct: 64  LVMDWVAS-----------GLDPQKCTIFQQSQVKQHAELHLLLSMITPLGWLERCPTYK 112

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             + ++  +   ++    Y +L A D + + +     +   G DQ  ++    ++  R  
Sbjct: 113 EQQQQITNKDLGNYGFLGYPVLMASDIL-IYRPQWVPV---GQDQLPHLEMTREICRRFN 168

Query: 218 T-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEM 251
                        LT         G KM K+   AI L + M
Sbjct: 169 HFYGEYLVEPQARLTPAAKCPGLDGRKMSKSYGNAIHLGEPM 210


>gi|325129567|gb|EGC52391.1| S4 RNA-binding domain protein [Neisseria meningitidis OX99.30304]
 gi|325133601|gb|EGC56262.1| S4 RNA-binding domain protein [Neisseria meningitidis M13399]
 gi|325135611|gb|EGC58228.1| S4 RNA-binding domain protein [Neisseria meningitidis M0579]
 gi|325143828|gb|EGC66144.1| S4 RNA-binding domain protein [Neisseria meningitidis M01-240013]
 gi|325204783|gb|ADZ00237.1| S4 RNA-binding domain protein [Neisseria meningitidis M01-240355]
 gi|325206742|gb|ADZ02195.1| S4 RNA-binding domain protein [Neisseria meningitidis M04-240196]
          Length = 77

 Score = 40.1 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           E +  + L  L+  AG A S  +A+  +    +  N  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGE 45


>gi|312622474|ref|YP_004024087.1| hemolysin a [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202941|gb|ADQ46268.1| hemolysin A [Caldicellulosiruptor kronotskyensis 2002]
          Length = 269

 Score = 40.1 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+V+ G   S  +AR  + S  + +NN  I      I  
Sbjct: 8   LLVEKGLVESREKARALILSGNVYVNNQKIEKAGEMIDE 46


>gi|302674230|ref|XP_003026800.1| hypothetical protein SCHCODRAFT_258801 [Schizophyllum commune H4-8]
 gi|300100484|gb|EFI91897.1| hypothetical protein SCHCODRAFT_258801 [Schizophyllum commune H4-8]
          Length = 335

 Score = 40.1 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           P  S+   +V R + +  LI ++  A S  EARR +    +K+N     N   ++   D
Sbjct: 122 PVTSLMFADVERRIDV--LIFRSCLAPSVYEARRLVVHGKVKLNGKQHQNANTRLAPGD 178


>gi|297544721|ref|YP_003677023.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842496|gb|ADH61012.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 327

 Score = 40.1 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 61/209 (29%), Gaps = 29/209 (13%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMM 94
             + G   +   +H G+      +         ++    +    ++              
Sbjct: 3   RVFSGVQPSGD-IHIGNYLG--AMRQFVALQEDYECFFCVVDLHALT----------VPQ 49

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRM 153
              +++EN      +   ++  G       +         +     L  +    +    +
Sbjct: 50  DPIKLKEN---TIELAGLYLAIGLDPKKVNLFVQS----HVSAHAELAWLLQCMTYFGEL 102

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + + K ++++S   F Y  L A D +     Y+      G DQ  ++    D+ 
Sbjct: 103 SRMTQFKEKSKGKETVSVGLFTYPDLMAADIL----LYNTHYVPVGEDQKQHLELTRDIA 158

Query: 214 ERLK--TPKLFALTSPLLTTASGTKMGKT 240
           +R      + F +  P++       M  T
Sbjct: 159 QRFNNRFGETFVVPEPMILKFGARIMSLT 187


>gi|296810354|ref|XP_002845515.1| 37S ribosomal protein NAM9 [Arthroderma otae CBS 113480]
 gi|238842903|gb|EEQ32565.1| 37S ribosomal protein NAM9 [Arthroderma otae CBS 113480]
          Length = 477

 Score = 40.1 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 4/150 (2%)

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           + +  T P  F+Q  +    +   ++          E     +L+     +A+ +   + 
Sbjct: 29  VRRPNTKPRTFFQQ-KWTAKSMTRAYHGEQVRESQWERMFSRRLRAVVPMDARSLSRNDG 87

Query: 307 TTMVHGREEAEKAATAAMECFDMSIH-SQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    GR    +A        D      +  P + ++   + R + +   I +A FA+ST
Sbjct: 88  SAQSAGRGSGLEALPEEQGGRDRKAQKPRDTPYMQMTFAPLERRLDV--AIFRALFASST 145

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +AR+ +    + +N   +      +   D
Sbjct: 146 RQARQFVIHGGVTVNGKKMQYPGYLLNPGD 175


>gi|218676602|ref|YP_002395421.1| tryptophanyl-tRNA synthetase II [Vibrio splendidus LGP32]
 gi|218324870|emb|CAV26621.1| Tryptophanyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 353

 Score = 40.1 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 53/194 (27%), Gaps = 20/194 (10%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H    L+     +         +       ++  NI 
Sbjct: 33  TGP-LHLGHYVGSLKQRVSLQHIHDQTILVADMQGL---------TDNAHNPSKVSSNIL 82

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +       +     KT   + +    L  +          +    N  +  E       
Sbjct: 83  NVVA-DYLAVGIDPTKTTICLQSQLPVLAELTMFYSNLVSIARLERNPTVKSEIQNKEFG 141

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---PKL 221
           R     F    Y I QA D        +  L   G DQ   +    ++  ++ +     +
Sbjct: 142 RSIPAGF--LTYPISQAADITAF----NATLVPVGDDQLPMLEQTNEIVRKVNSLAGKPI 195

Query: 222 FALTSPLLTTASGT 235
                PLL+ AS  
Sbjct: 196 LNECRPLLSNASRL 209


>gi|311747236|ref|ZP_07721021.1| tryptophan--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578947|gb|EAZ83111.1| tryptophan--tRNA ligase [Algoriphagus sp. PR1]
          Length = 325

 Score = 40.1 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 89/307 (28%), Gaps = 44/307 (14%)

Query: 50  HAGHL----TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQENIE 104
           H G++       + L   Q    +    +    S+    S +D E+R+          + 
Sbjct: 15  HLGNILGAIVPAIELIN-QNDKEESFIFIADLHSL---TSSKDGETRKQNTLAVAAAWLA 70

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
                      +G      +           +  +L   +  F     + +  S + + +
Sbjct: 71  -----------FGLDIDKTVFYRQS---RRPEVAELTWYLSCFTPFPMLANAHSFKDKSE 116

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTPKLFA 223
           R   ++   F Y +L A D +     Y   L   G DQ  ++    D+     +  +   
Sbjct: 117 RLSDVNAGLFTYPVLMAADIL----LYSADLVPVGKDQMQHLEMTRDIASAFNRITEEEI 172

Query: 224 LTSP---------LLTTASGTKMGKTLSGAI-------WLNKEMTSPYNFWQYWRNIDDA 267
           LT P          +    G KM K+ +  I        L K + S            D 
Sbjct: 173 LTMPEARISESVKTIPGTDGQKMSKSYNNFIDIFLPEKALKKNVNSIVTDSTPLEEPKDP 232

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           DV +  K  + +   E  +  + +    N        E   ++  +   E+         
Sbjct: 233 DVCNVYKLYSLIATEEQTQQLRAKYLGGNYGYGHAKKEFMQLILDKYSKERELFNYYMEH 292

Query: 328 DMSIHSQ 334
              I  +
Sbjct: 293 PEEIERK 299


>gi|119469122|ref|ZP_01612106.1| 16S rRNA pseudouridylate 516 synthase [Alteromonadales bacterium
           TW-7]
 gi|119447374|gb|EAW28642.1| 16S rRNA pseudouridylate 516 synthase [Alteromonadales bacterium
           TW-7]
          Length = 232

 Score = 40.1 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKNHIICHLCG 418
             +AR  +K   + +N  +I+    Q+   D     G   +  GK+  ++    G
Sbjct: 19  RTQARASIKRKEVSVNGEVITAHNFQLAKDDVVLHNGEPLVFLGKRYFMLNKPVG 73


>gi|167040341|ref|YP_001663326.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256750726|ref|ZP_05491611.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914425|ref|ZP_07131741.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724339|ref|YP_003904090.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166854581|gb|ABY92990.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256750309|gb|EEU63328.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889360|gb|EFK84506.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581400|gb|ADN54799.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 327

 Score = 40.1 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 83/316 (26%), Gaps = 42/316 (13%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             + G   +   +H G+      +      Q   ++         ++             
Sbjct: 3   KVFSGVQPSGD-IHIGNYLG--AMRQFVALQD-DYECFFCAVDLHAL------------- 45

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNR 152
              Q+ +   EK   + + ++  G       +         +     L  +    +    
Sbjct: 46  TVPQDPKVLKEKTIELAALYLAIGLDPKKVTIFIQS----HVPAHAELAWLLQCITYFGE 101

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +      + + K ++S+S   F Y  L A D +     Y+      G DQ  ++    D+
Sbjct: 102 LSRMTQFKDKSKGKESVSVGLFTYPDLMAADIL----LYNTHYVPVGEDQKQHLELTRDI 157

Query: 213 GERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
            +R      + F +  P++       M  T         +  S  N      +   +   
Sbjct: 158 AQRFNNRFGETFVVPEPMILKLGARIMSLT--DPTKKMSKSDSDPNNRINLLDEPSSIKK 215

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
              K +T                   + K  ++  +T          +            
Sbjct: 216 KIMKAVTDSESEIRLDW---------DNKPGVSNLLTIYSLFTGMEIEEVINKFNGQGYG 266

Query: 331 IHSQHMPTISISKDEV 346
              + +  + I K  V
Sbjct: 267 TLKKELAEVVIDKLTV 282


>gi|319790172|ref|YP_004151805.1| pseudouridine synthase [Thermovibrio ammonificans HB-1]
 gi|317114674|gb|ADU97164.1| pseudouridine synthase [Thermovibrio ammonificans HB-1]
          Length = 238

 Score = 40.1 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           M L  L+ + GF  + ++ +R +K   +++N  ++ +   Q+  
Sbjct: 1   MRLDKLLAEGGF-GTRSQVKRLIKKGHVEVNGEVVKDPSFQVDP 43


>gi|323142425|ref|ZP_08077251.1| tryptophan--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413118|gb|EFY04011.1| tryptophan--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 363

 Score = 40.1 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 67/232 (28%), Gaps = 27/232 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++++
Sbjct: 14  PTGR-LHVGHYVGSLRQRVQLQNSGAYDKVYIMIADAQAL---------TDNAEHPEKVR 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     S    N  +  E   
Sbjct: 64  KNIIEV-ALDYLACGLDPAKSTLFIQSMVPQLTELTFYYMNLVTVSRLQRNPTVKNEIKM 122

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDL 212
              +      F  F Y I QA D                    Q        N + G  L
Sbjct: 123 RNFEASIPTGF--FCYPISQAADITAFRATVVPVGEDQLPMLEQCKEIVHKFNSVYGETL 180

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            +             L       KM K+L   I+L+     P +  +   ++
Sbjct: 181 VDPDIMLPQNDACLRLPGIDGKAKMSKSLGNCIYLS---DEPEDIKKKVMSM 229


>gi|318042231|ref|ZP_07974187.1| hypothetical protein SCB01_11007 [Synechococcus sp. CB0101]
          Length = 263

 Score = 40.1 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +  AG   S +     ++  ++++N  +I++   +++  D
Sbjct: 191 LDAVASAGLGLSRSRMADLIRQGSVRVNWQVITSPSKELRCGD 233


>gi|317486146|ref|ZP_07944990.1| S4 domain-containing protein [Bilophila wadsworthia 3_1_6]
 gi|316922595|gb|EFV43837.1| S4 domain-containing protein [Bilophila wadsworthia 3_1_6]
          Length = 262

 Score = 40.1 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            + + +   +  AG   S   A   + +  + +N   +++  LQ+   
Sbjct: 2   EKTVRINKALADAGVC-SRRRADELIAAGRVSVNGEPVASPGLQVTPG 48


>gi|172035830|ref|YP_001802331.1| hemolysin A [Cyanothece sp. ATCC 51142]
 gi|171697284|gb|ACB50265.1| hemolysin A [Cyanothece sp. ATCC 51142]
          Length = 270

 Score = 40.1 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNE--KLQIKLQDFDSTGNIKLSFG 407
           L+V+    +S  +A+R +++  +K+N  II     +++I            +S G
Sbjct: 9   LLVERNLCSSRQQAQRCIRAGEVKVNQRIIDKPGTEIEITADIELKQKPPYVSRG 63


>gi|172058280|ref|YP_001814740.1| pseudouridine synthase [Exiguobacterium sibiricum 255-15]
 gi|171990801|gb|ACB61723.1| pseudouridine synthase [Exiguobacterium sibiricum 255-15]
          Length = 239

 Score = 40.1 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L  L+   G A S  E ++ LKS AI+++  I+ + K  +  ++
Sbjct: 1   MRLDKLLSNMG-AGSRKEVKQLLKSGAIQVDGEIVYDPKQHVDTEN 45


>gi|302390984|ref|YP_003826804.1| 30S ribosomal protein S4P [Acetohalobium arabaticum DSM 5501]
 gi|302203061|gb|ADL11739.1| SSU ribosomal protein S4P [Acetohalobium arabaticum DSM 5501]
          Length = 208

 Score = 40.1 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 3/122 (2%)

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           +  +     E    A  +     +       ++      R+    + +   + F+    +
Sbjct: 25  RCFSDKCAIERRPYAPGEQGNKRQKLSEFGVQLREKQKVRQIYGVSESQFKKYFE---MA 81

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            + P I+           L  ++ + GFA S NEAR+ ++     +N   +      ++ 
Sbjct: 82  DNKPGITGENFLKILESRLDNIVYRLGFAASRNEARQLVRHGHFLVNGERVDIPSYLVEE 141

Query: 394 QD 395
            D
Sbjct: 142 GD 143


>gi|323500011|ref|ZP_08104965.1| tryptophanyl-tRNA synthetase II [Vibrio sinaloensis DSM 21326]
 gi|323314867|gb|EGA67924.1| tryptophanyl-tRNA synthetase II [Vibrio sinaloensis DSM 21326]
          Length = 340

 Score = 40.1 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 64/220 (29%), Gaps = 29/220 (13%)

Query: 45  TASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           T   LH GH    +     LQ T H    L+     +         +      +++  NI
Sbjct: 20  TGP-LHLGHYVGSLAQRVALQDT-HDQTILVADMQGL---------TDNAHTPEKVSSNI 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +       +     KT   + +    L  +          S    N  +  E      
Sbjct: 69  LNVVA-DYLAVGISVEKTTICLQSQLPALAELTMYYSNLVTISRLERNPTVKNEIQSKGF 127

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------ 217
           +R     F    Y I QA D       ++  L   G DQ   +    ++  ++       
Sbjct: 128 ERSIPAGF--LTYPISQAADIT----GFNASLVPVGDDQLPMLEQTNEIVRKINTLAGHN 181

Query: 218 ----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                  L + +  L +T    KM K++  AI L      
Sbjct: 182 VLTECRPLLSQSPRLPSTDGKNKMSKSMGNAINLGATPDE 221


>gi|229496471|ref|ZP_04390186.1| ribosomal large subunit pseudouridine synthase B [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316611|gb|EEN82529.1| ribosomal large subunit pseudouridine synthase B [Porphyromonas
           endodontalis ATCC 35406]
          Length = 459

 Score = 40.1 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 44/134 (32%), Gaps = 7/134 (5%)

Query: 282 SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI 341
            +   +   + ++     + +  +        +  +K         +  I    MP    
Sbjct: 162 EDDRPIYPFERQKKRHNAEPLDEKAQHAGQSPKGKKKKKKKIQRRPEEVISYPEMP---- 217

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              +    + L   +  +G   S   A + +    + +N  I++     +  +DF S   
Sbjct: 218 --VDPKTPLRLNKFLASSGVC-SRRVADQLIVDGHVSVNGEIVTQLGKHVTREDFISVDG 274

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +++ +
Sbjct: 275 KPVSIEKKIYVLLN 288


>gi|322371492|ref|ZP_08046041.1| tryptophanyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549024|gb|EFW90689.1| tryptophanyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 520

 Score = 40.1 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 32/282 (11%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           + + +     A  G+  T    H GH      L W Q+ G       G    +I D    
Sbjct: 81  EAMRNDEPFAALSGFMPTGDP-HIGHKLVFDELIWHQQQG-------GDTYGLIAD---- 128

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                  R    +E  E  +    S I  G    +  +        + +  DL  E+GS 
Sbjct: 129 -LEAHSARGLSWEEIDEHARDYLLSLIALGFDPEEGTLYRQSE---NRELQDLAFELGSK 184

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-LAKNYDCRLQMGGSDQWGNI 206
            + +        +S    +   +      ++ Q  D +          +   G DQ  ++
Sbjct: 185 ANFSE------FQSIYGFDGETNVSHVQSVVTQMADILYPQLSEPKPTVIPVGPDQDPHV 238

Query: 207 ICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSP-----YNFWQY 260
               DL  R++    F +T    +  A   ++    +      +    P      +   +
Sbjct: 239 RLARDLAVRMRY---FGVTKAYASFEADEEELSHVAAAYEARKEYADDPDMPRCEDAAAW 295

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
                D+DV +    ++ L  + ++ +          A +  
Sbjct: 296 LAEHGDSDVPAVETTISKLENAGMEPLRPRVRFLDRNATEEA 337


>gi|260425745|ref|ZP_05779725.1| ribosomal large subunit pseudouridine synthase B [Citreicella sp.
           SE45]
 gi|260423685|gb|EEX16935.1| ribosomal large subunit pseudouridine synthase B [Citreicella sp.
           SE45]
          Length = 316

 Score = 40.1 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  ++ +AG   S  EA + ++   + +N  II+   L +  +D
Sbjct: 52  PAGDRIAKVLARAG-VASRREAEKMIEMGRVAVNGEIITRAALNVTDKD 99


>gi|218663826|ref|ZP_03519756.1| RNA-pseudouridine synthase protein, ribosomal large subunit B
           [Rhizobium etli IE4771]
          Length = 267

 Score = 40.1 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            ++ D   + + L   + K G+  S  +A R +    + ++   +++    + L
Sbjct: 15  KLTADAAGKRVTLPRALSKLGYC-SRTQAERLIAEGRVSVDGRTVNDPSAWVDL 67


>gi|119511719|ref|ZP_01630823.1| Hemolysin A [Nodularia spumigena CCY9414]
 gi|119463628|gb|EAW44561.1| Hemolysin A [Nodularia spumigena CCY9414]
          Length = 270

 Score = 40.1 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 18/47 (38%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           L+V     +S   A+R +++  + +N  ++     ++          
Sbjct: 9   LLVDLNLCSSRALAQRLIQAGEVTVNQQVVDKAGTEVDTAAQIKVKE 55


>gi|42518284|ref|NP_964214.1| tryptophanyl-tRNA synthetase II [Lactobacillus johnsonii NCC 533]
 gi|227888946|ref|ZP_04006751.1| tryptophanyl-tRNA synthetase II [Lactobacillus johnsonii ATCC
           33200]
 gi|41582568|gb|AAS08180.1| tryptophanyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227850534|gb|EEJ60620.1| tryptophanyl-tRNA synthetase II [Lactobacillus johnsonii ATCC
           33200]
 gi|329666594|gb|AEB92542.1| tryptophanyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 342

 Score = 40.1 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYDPYIMIADTQAL------TDNARDPEKIKNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 NFKDSIPVGFLN--YPVSQAADITAFK----ATIIPVGDDQEPMLEQTREIVR 167


>gi|225569254|ref|ZP_03778279.1| hypothetical protein CLOHYLEM_05336 [Clostridium hylemonae DSM
           15053]
 gi|225162053|gb|EEG74672.1| hypothetical protein CLOHYLEM_05336 [Clostridium hylemonae DSM
           15053]
          Length = 247

 Score = 40.1 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M L   + +AG   S  EA R ++   + ++        +Q+            +  GKK
Sbjct: 1   MRLNKFLSEAGVC-SRREADRLIEEGRVTVDGKKAV-PGMQVDPSSE-------VRVGKK 51

Query: 410 N 410
            
Sbjct: 52  R 52


>gi|154488635|ref|ZP_02029484.1| hypothetical protein BIFADO_01942 [Bifidobacterium adolescentis
           L2-32]
 gi|154082772|gb|EDN81817.1| hypothetical protein BIFADO_01942 [Bifidobacterium adolescentis
           L2-32]
          Length = 238

 Score = 40.1 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 19/42 (45%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +++ G   S ++A+R +    + +N   ++    ++   D  
Sbjct: 1   MLERGLTDSRSKAQRLIADGKVSVNGVTVTKASAKVGGDDVI 42


>gi|304393184|ref|ZP_07375112.1| ribosomal large subunit pseudouridine synthase B [Ahrensia sp.
           R2A130]
 gi|303294191|gb|EFL88563.1| ribosomal large subunit pseudouridine synthase B [Ahrensia sp.
           R2A130]
          Length = 344

 Score = 40.1 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +   + +AG   S  +A R +++  +K+N  +++     +  +D   
Sbjct: 21  IAKRMARAGLC-SRRDAERWIEAGRVKVNGKLLTTPAHTVTPRDRIE 66


>gi|188996649|ref|YP_001930900.1| pseudouridine synthase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931716|gb|ACD66346.1| pseudouridine synthase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 244

 Score = 40.1 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLS-FGKKNHII 413
           I ++G   S  +A   +K   +K+N  II +   +I  + D        +    KK +I 
Sbjct: 9   IAQSGIC-SRRKADELIKEGKVKVNGEIIKDLGAKINPEKDIVEVEGNIIKPVEKKIYIK 67

Query: 414 C 414
            
Sbjct: 68  I 68


>gi|171690318|ref|XP_001910084.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945107|emb|CAP71218.1| unnamed protein product [Podospora anserina S mat+]
          Length = 449

 Score = 40.1 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           FA+S  +AR+ +   A+K+N   + +    +   D 
Sbjct: 147 FASSARQARQFVIHGAVKVNGKKMQHPGYLLNPGDL 182


>gi|309389171|gb|ADO77051.1| hemolysin A [Halanaerobium praevalens DSM 2228]
          Length = 275

 Score = 40.1 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 4/59 (6%)

Query: 353 LTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK---LSFG 407
           L ++V +     S ++A+R + +  + +N         QI           K   +S G
Sbjct: 7   LDILVTERKMFKSRSQAKRAIMAGLVFVNGQREDKAGTQIDPAAEIEYKGTKNPYVSRG 65


>gi|51598268|ref|YP_072456.1| tryptophanyl-tRNA synthetase [Borrelia garinii PBi]
 gi|51572839|gb|AAU06864.1| tryptophanyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 345

 Score = 40.1 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 70/223 (31%), Gaps = 34/223 (15%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS-------INTIPF 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+   + +   ++  G       +          +  +L        +V R+    S++ 
Sbjct: 62  NV---REMVLDYLACGINPNKVSIYLQSAI---PELFELYLMFSMIVTVARLQRIPSIKD 115

Query: 162 RLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
                  + + +    Y +L + D +         L   G D   +I    +L  R    
Sbjct: 116 MSIAAGLKEIPYGLLGYPVLMSADILMAK----ANLVPVGRDNESHIEFARELARRFNHL 171

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                      +F  + PL+      KM K+L  AI+L  +  
Sbjct: 172 YENNFFPIPESVFTDSRPLVGICGKNKMSKSLDNAIFLKDDEN 214


>gi|325292121|ref|YP_004277985.1| hemolysin [Agrobacterium sp. H13-3]
 gi|325059974|gb|ADY63665.1| hemolysin [Agrobacterium sp. H13-3]
          Length = 250

 Score = 40.1 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 16/48 (33%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +      L  L+V  G   S + AR  +    + +N    +     +
Sbjct: 2   SKTPENERLDQLLVSLGHFASRSRARDAIARGTVSVNGKTATKPSQTV 49


>gi|184154543|ref|YP_001842883.1| tryptophanyl-tRNA synthetase II [Lactobacillus fermentum IFO 3956]
 gi|183225887|dbj|BAG26403.1| tryptophanyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 337

 Score = 40.1 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q++G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLRERVKMQESGEYDPFIMIADQQAL------TDNARDPEKIRRSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 65  EVALDY----LAVSLDPAKSTLFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              R     F  F Y + Q  D           L   G DQ   +    ++  
Sbjct: 121 NFNRSIPAGF--FTYPVSQTADITAFK----ANLVPVGDDQEPMLEQAREIVR 167


>gi|182419189|ref|ZP_02950442.1| tryptophanyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237668767|ref|ZP_04528751.1| tryptophan--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376829|gb|EDT74400.1| tryptophanyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657115|gb|EEP54671.1| tryptophan--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 338

 Score = 40.1 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 38/309 (12%), Positives = 83/309 (26%), Gaps = 43/309 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ++G ++   ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVQLQESGEYESFIMIADQQAL------TDNARDPEKIRRSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     ++   + +    L  +    L     S    N  +  E  + 
Sbjct: 65  EVALDY----LAVGLDPARSTIFVQSQLPELHELTMHYLNLVTLSRLERNPTVKSEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TP 219
             +      F    Y + QA D               G DQ   I    ++         
Sbjct: 121 NYENSIPAGF--LIYPVSQAADITAFK----ATTVPVGEDQLPMIEQTREIVRSFNSLYG 174

Query: 220 KLFALTSPLLT----------TASGTKMGKTLSGAIWLNKEMT-------SPYNFWQYWR 262
           ++      ++           T    KM K++   I+L+ +         S Y    + R
Sbjct: 175 EVLVEPEAVIPKNDTCGRLPGTDGKAKMSKSIGNCIYLSDDADTIKKKVMSMYTDPNHIR 234

Query: 263 -----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
                 I+   V ++            +  A  +   + + K                 +
Sbjct: 235 VEDPGQIEGNTVFTYLDVFAPNKEEVEEMKAHYKRGGLGDMKVKKYLNEVMQAELEPIRK 294

Query: 318 KAATAAMEC 326
           +    A + 
Sbjct: 295 RREEFAKDM 303


>gi|315103776|gb|EFT75752.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium
           acnes HL050PA2]
          Length = 263

 Score = 40.1 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 24/49 (48%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            + L   +V+AG A S   A R ++   + +N ++++   +++   D  
Sbjct: 18  PVRLDQALVEAGLARSRTLATRLVREGRVTVNRAVVTKPAMKVSTTDVL 66


>gi|256821686|ref|YP_003145649.1| 30S ribosomal protein S4 [Kangiella koreensis DSM 16069]
 gi|256795225|gb|ACV25881.1| ribosomal protein S4 [Kangiella koreensis DSM 16069]
          Length = 206

 Score = 40.1 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              + + + G+ LL L+           G+A +  EAR+ +   AI IN   ++     +
Sbjct: 78  EADRLKGATGVNLLQLLESRLDNVVYRMGYAATRGEARQLVSHKAILINGETVNIPSYTV 137

Query: 392 KLQDFDSTGN 401
           K +D  S   
Sbjct: 138 KAEDVVSVRE 147


>gi|255658173|ref|ZP_05403582.1| hemolysin A [Mitsuokella multacida DSM 20544]
 gi|260849481|gb|EEX69488.1| hemolysin A [Mitsuokella multacida DSM 20544]
          Length = 268

 Score = 40.1 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G A S   A+R + +  + ++   I      +K +
Sbjct: 9   LLVERGLAGSRERAKRMIMAGEVLVDGQKIDKAGTTVKPE 48


>gi|163853261|ref|YP_001641304.1| RNA-binding S4 domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163664866|gb|ABY32233.1| RNA-binding S4 domain protein [Methylobacterium extorquens PA1]
          Length = 669

 Score = 40.1 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +   +     G  +   I +AG A S  +A   +++  + +N  ++++  + +   D 
Sbjct: 9   PAVPADQPAAPEGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGKVLTSPAINVTDADR 67

Query: 397 D 397
            
Sbjct: 68  I 68


>gi|258512643|ref|YP_003186077.1| 30S ribosomal protein S4 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479369|gb|ACV59688.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 208

 Score = 40.1 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+           GFA S  EAR+ ++   I++N   +      +K  D  S  
Sbjct: 89  GETLLQLLESRLDNVVYRLGFAASRAEARQLVRHGHIQVNGRRVDIPSFLVKEGDVVSVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|218289979|ref|ZP_03494156.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius LAA1]
 gi|218239964|gb|EED07151.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius LAA1]
          Length = 208

 Score = 40.1 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+           GFA S  EAR+ ++   I++N   +      +K  D  S  
Sbjct: 89  GETLLQLLESRLDNVVYRLGFAASRAEARQLVRHGHIQVNGRRVDIPSFLVKEGDVVSVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|327403468|ref|YP_004344306.1| tryptophanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318976|gb|AEA43468.1| tryptophanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 322

 Score = 40.1 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 95/322 (29%), Gaps = 46/322 (14%)

Query: 50  HAGHLT-QLMLLFWL-QKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQEIQENIEK 105
           H G+L   ++    L + + +     +    S+  I D     E+ R          +  
Sbjct: 15  HLGNLLGAILPAIELAKDSKNDSFLFIANLHSLTQIKD----SETMRENTYSTAAVWLAC 70

Query: 106 IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
                         ++D   +    W            +  +F   R+    S + +   
Sbjct: 71  G---LDPEKTTFYRQSDVAEVTELMW-----------HLLCYFPFQRLTLAHSFKDKADY 116

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFA 223
              ++   F Y IL A D +     YD  +   G DQ  ++    D+  R   +  + F 
Sbjct: 117 LADVNAGLFTYPILMAADIL----LYDAEVVPVGKDQLQHLEIARDVASRFNHQMGETFV 172

Query: 224 L-------TSPLLTTASGTKMGKTLSGAIWLN-------KEMTSPYNFWQYWRNIDDADV 269
           L       T+ ++    G KM K+ +  I +        K++ S     +   +  D + 
Sbjct: 173 LPDARIDETTKIIPGTDGEKMSKSRNNFINIFLPEKQLKKQVMSILTDSKGLEDPKDPET 232

Query: 270 VSFAKRL----TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
               +      +   +  +       G     AK  +   I        E   A      
Sbjct: 233 CHIFRLYELLASATEIETMRSNYLAGGYGYGHAKTALLELILRKFSTEREKYNALMEDKY 292

Query: 326 CFDMSIHSQHMPTISISKDEVS 347
             D ++         I+++ + 
Sbjct: 293 QIDKALEIGASKARLIAQETLK 314


>gi|188583517|ref|YP_001926962.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001]
 gi|179347015|gb|ACB82427.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001]
          Length = 577

 Score = 40.1 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +   I +AG A S  +A   +++  + +N  I+++  + +   D  
Sbjct: 23  PEGERIAKAIARAGIA-SRRDAEAMIEAGRVSLNGKILTSPAINVTESDRI 72


>gi|302882319|ref|XP_003040070.1| hypothetical protein NECHADRAFT_72284 [Nectria haematococca mpVI
           77-13-4]
 gi|256720937|gb|EEU34357.1| hypothetical protein NECHADRAFT_72284 [Nectria haematococca mpVI
           77-13-4]
          Length = 511

 Score = 40.1 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+S  +AR+ +   A+K+N   + +    +   D
Sbjct: 173 FASSVRQARQFIIHGAVKVNGKKMVHPSYALNPGD 207


>gi|118595311|ref|ZP_01552658.1| 30S ribosomal protein S4 [Methylophilales bacterium HTCC2181]
 gi|118441089|gb|EAV47716.1| 30S ribosomal protein S4 [Methylophilales bacterium HTCC2181]
          Length = 209

 Score = 40.1 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  LL L+         K G   S  E+R+ +K NAI +N   ++    Q+   D
Sbjct: 90  GENLLQLLESRLDNVVYKMGLGASRTESRQIVKHNAILVNGKRVNIPSFQVSPGD 144


>gi|16331005|ref|NP_441733.1| hypothetical protein slr0950 [Synechocystis sp. PCC 6803]
 gi|1653500|dbj|BAA18413.1| slr0950 [Synechocystis sp. PCC 6803]
          Length = 274

 Score = 40.1 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 19/40 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V  G   S   A+R +++  +K+N  ++      + + 
Sbjct: 12  LLVAKGLCESRALAQRLIRAGEVKVNQQLVDKPGTLVTMD 51


>gi|192360200|ref|YP_001982275.1| RNA pseudouridylate synthase family protein [Cellvibrio japonicus
           Ueda107]
 gi|190686365|gb|ACE84043.1| RNA pseudouridylate synthase family protein [Cellvibrio japonicus
           Ueda107]
          Length = 376

 Score = 40.1 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 55/147 (37%), Gaps = 12/147 (8%)

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAME 325
            +  +    +  P   +  +A  +  ++    AK     ++T     R  + KA + + +
Sbjct: 1   MIKKYTPDSSDTPTRAVKPVASKKRADVSAKPAKSSRPEKLTNSTSTRPASGKADSKSAK 60

Query: 326 CFDMSIHSQHMP-TISISKDEVSRGMGLLT-----LIVKAGFATSTNEARRHLKSNAIKI 379
                   + +P    I+K  V      +      ++ +AG   S  E  R ++   +K+
Sbjct: 61  P--AKTPLKSLPKEAKIAKPSVKESASPVDEKLQKVLARAGI-GSRREMERAIEEGRVKV 117

Query: 380 NNSIIS-NEKLQIKLQDFDSTGNIKLS 405
           N+ I +  +++ +  + F     + L 
Sbjct: 118 NDRIATLGDRVTLTDKIFVGGQRVVLR 144


>gi|302682412|ref|XP_003030887.1| hypothetical protein SCHCODRAFT_56595 [Schizophyllum commune H4-8]
 gi|300104579|gb|EFI95984.1| hypothetical protein SCHCODRAFT_56595 [Schizophyllum commune H4-8]
          Length = 396

 Score = 40.1 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 76/263 (28%), Gaps = 31/263 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R    ++  P  +  + ++G     Y G   T    H  +   L  +      G +
Sbjct: 11  ELITRDL-QEVLGPDIIKNILAEGRTPKCYWGTACTGRP-HIAYFVPLTKIADFLHAGVE 68

Query: 70  PI---------SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
                       L     + +       ++ +       Q        + + F   G   
Sbjct: 69  VTKPLLRFSCPFL--DVHAFL-------DNLKAPIELVEQRCKYYRFVLMAVFETLGIPT 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES-VRSRLKREQSLSFLEFNYMIL 179
           +   ++   ++  + +Y      + +  + +      + V  +++           Y  L
Sbjct: 120 SKLRIVEGSSYQLTKEYNMDNYRLCAIVTEHDAKKAGAEVVKQVESPL---LSGLLYPGL 176

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA D   L     C  Q GG DQ            +L   K   L + ++   +G KM  
Sbjct: 177 QALDEQYL----GCDFQFGGVDQRKIFTFAEAYLPKLGYAKRAHLMNAMVPGLAGGKM-- 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWR 262
           + S        +  P    +  +
Sbjct: 231 SASDPNSKIDFLDPPEVVRKKIK 253


>gi|300778150|ref|ZP_07088008.1| ribosomal large subunit pseudouridine synthase B [Chryseobacterium
           gleum ATCC 35910]
 gi|300503660|gb|EFK34800.1| ribosomal large subunit pseudouridine synthase B [Chryseobacterium
           gleum ATCC 35910]
          Length = 393

 Score = 40.1 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            I KD     + L   I  +G   S  EA   +    +++N  +++    Q++  D
Sbjct: 151 KIEKDVHKDSIRLNKYIANSGIC-SRREADELITQGLVEVNGKVVTEMGYQVQKTD 205


>gi|156938197|ref|YP_001435993.1| 30S ribosomal protein S4e [Ignicoccus hospitalis KIN4/I]
 gi|189045350|sp|A8ACD4|RS4E_IGNH4 RecName: Full=30S ribosomal protein S4e
 gi|156567181|gb|ABU82586.1| SSU ribosomal protein S4E [Ignicoccus hospitalis KIN4/I]
          Length = 255

 Score = 40.1 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +   + LL L+    G+A ++ EAR+ +    IK++  +  + K  +   D   
Sbjct: 40  IEESIPLLILVRDVLGYAETSREARKLIAEGRIKVDGRVRKDYKFPVGAMDVIE 93


>gi|147677969|ref|YP_001212184.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Pelotomaculum
           thermopropionicum SI]
 gi|146274066|dbj|BAF59815.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Pelotomaculum
           thermopropionicum SI]
          Length = 252

 Score = 40.1 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 14/70 (20%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK--- 408
           L  ++ +AG   S     R + + A+K+N  +++    ++           K+  G    
Sbjct: 16  LQKVMARAG-VASRRHCERLIAAGAVKVNGKVVTEVGCKVDPARD------KIQVGNRTI 68

Query: 409 ----KNHIIC 414
               + + I 
Sbjct: 69  SLFPRRYYIL 78


>gi|332982681|ref|YP_004464122.1| 30S ribosomal protein S4P [Mahella australiensis 50-1 BON]
 gi|332700359|gb|AEE97300.1| SSU ribosomal protein S4P [Mahella australiensis 50-1 BON]
          Length = 206

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 8/60 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+ +         GFA S  +AR+ ++   I +N   ++     +K  D  +  
Sbjct: 88  GENLLQLLERRLDNTVYRIGFADSRAQARQLVRHGHITVNGRKVNIPSYSVKPGDIIAVK 147


>gi|331005382|ref|ZP_08328766.1| Tryptophanyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330420836|gb|EGG95118.1| Tryptophanyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 347

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 83/290 (28%), Gaps = 33/290 (11%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q+  +     +    ++I     + +    +    ++     + 
Sbjct: 28  HLGNYVGAIRPAIEASQQADNLSFYFLADFHALI-----KSQEPEKIHLSSMEIAATWLA 82

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
               +       ++D   +    WL +      L      +      + E+ +     + 
Sbjct: 83  LGLDTDNAVFYRQSDVPEIPELCWLLTCMAAKGLMNRAHAYKAAVQANQEASQ---DADF 139

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   ++Y +L A D +      +      G DQ  ++    D+  R         T P
Sbjct: 140 GVTMGLYSYPVLMAADILMF----NADRVPVGKDQIQHVEMARDIAARFNHHFGENFTLP 195

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW----------RNIDDAD 268
                    +L    G KM K+ +  I L                        ++ D + 
Sbjct: 196 QAVVGDNVAVLQGLDGRKMSKSYNNTIPLFLPEKQLKKHINKIKTNLLEPGDPKDPDTST 255

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           V    +   T   +   R A   G    EAKK +   +   +    E   
Sbjct: 256 VFQIWEAFATPEQTAEMRQAFADGIAWGEAKKRLFELVNNEIGDARERYN 305


>gi|313896630|ref|ZP_07830179.1| ribosomal RNA large subunit methyltransferase J [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312974815|gb|EFR40281.1| ribosomal RNA large subunit methyltransferase J [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 268

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 10/63 (15%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDF--DSTGNIKL 404
           L+V  G A S   A+R + +  + ++   +         +  L++  +D    S G IKL
Sbjct: 9   LLVAQGLAPSRERAKRLIMAGQVLVDERRVDKAGTTVDADASLRVTGEDLPYVSRGGIKL 68

Query: 405 SFG 407
           + G
Sbjct: 69  AKG 71


>gi|227832272|ref|YP_002833979.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
 gi|262183872|ref|ZP_06043293.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
 gi|254764581|sp|C3PL37|RS4_CORA7 RecName: Full=30S ribosomal protein S4
 gi|227453288|gb|ACP32041.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
          Length = 201

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I +AG A +  +AR+ +      +N   I+    ++   D      
Sbjct: 95  NVIYRAGLANTRRQARQLVSHGHFTVNGKKINVPSFRVTQYDIIDVRE 142


>gi|223938948|ref|ZP_03630834.1| hemolysin A [bacterium Ellin514]
 gi|223892375|gb|EEF58850.1| hemolysin A [bacterium Ellin514]
          Length = 252

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 8/73 (10%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKLSFGKK- 409
             +V+ G   S  +ARR + +  + IN         ++K  D     S        G K 
Sbjct: 8   QALVERGLCESREKARRAIMAGQVTINQQPAKKPSDRVKQGDNIALASGDKYVSRGGLKM 67

Query: 410 ----NHIICHLCG 418
                H   ++ G
Sbjct: 68  EHALKHFALNVAG 80


>gi|70950009|ref|XP_744364.1| tyrosyl-tRNA synthetase [Plasmodium chabaudi chabaudi]
 gi|56524288|emb|CAH74412.1| tyrosyl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi]
          Length = 372

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 87/277 (31%), Gaps = 29/277 (10%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMGGGT 78
           I        L  +  +  Y G++ +   +H   G L +  ++  L   G   I  +    
Sbjct: 41  IQPEELKLKLLQKRKLICYDGFEPSGR-MHIAQG-LLKSHIVNTLTNNGCTFIFWIADWF 98

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK-- 136
           + + +   +         +  Q  IE  K         G    +   +     +      
Sbjct: 99  AQLNN---KMSGDLNKIKKVGQYFIEVWKS-------CGMNMENVQFMWASDEINKNPDK 148

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           Y   + +I   F++NR+    ++  R + E +    +  Y  +Q  D   L    +  + 
Sbjct: 149 YWSTVIDISRSFNINRIKRCLTIMGRTEGEDNY-CSQILYPCMQCADIFFL----NVDIC 203

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFAL----TSPLLTTASGTKMGKTLSGAIWLNKEMT 252
             G+DQ    +   +  +  K  K   +      P L            + AI+++    
Sbjct: 204 QLGTDQRKVNMLAREYCDIKKIKKKPVILSHGMLPGLLEGQEKMSKSDENSAIFMDDNEA 263

Query: 253 SPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEID 285
                 +        I++  + ++AK +      E +
Sbjct: 264 DVNRKIKKGYCPPNVIENNPIFAYAKTIIFPHYKEFN 300


>gi|86139313|ref|ZP_01057883.1| tryptophanyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824157|gb|EAQ44362.1| tryptophanyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 342

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 69/209 (33%), Gaps = 28/209 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              + G   +  +LH G+      L      Q    + I  M    +             
Sbjct: 8   PRVFSGIQPSG-NLHLGNYLG--ALKRFVDWQDRDVESIYCMVDLHA------------- 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +   Q  Q+ ++  + + + FI  G     A+++N        +   +   +     + R
Sbjct: 52  ITVWQNPQDLMKSTRELCAGFIAAGLDPEQAILINQSQVPEHAQLAWIFNCVARMGWMQR 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+      K  Q+ S   F Y  L A D +     +   + +G  DQ  ++    D+
Sbjct: 112 MTQFKD--KAGKNAQNASLGLFAYPALMAADILT---YHATHVPVG-EDQKQHLELTRDI 165

Query: 213 GERLKTP---KLFALTSPLLTTASGTKMG 238
             +         F +T P++  A+   M 
Sbjct: 166 ATKFNHDYDVDFFPITEPVIEGAATRVMS 194


>gi|330827739|ref|YP_004390691.1| tryptophanyl-tRNA synthetase II [Aeromonas veronii B565]
 gi|328802875|gb|AEB48074.1| tryptophanyl-tRNA synthetase II [Aeromonas veronii B565]
          Length = 337

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 58/195 (29%), Gaps = 20/195 (10%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  ++   ++    ++         +       ++ +N+
Sbjct: 12  PTGK-LHIGHYVGSLRQRVEAQHHYRQFVMIADLQAL---------TDNGHNPAKVTDNV 61

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +     KT   + +    L  +    L     +    N  +  E  +   
Sbjct: 62  LEVMA-DYLAVGLDPAKTTFCLQSALPALAELTCYYLNLVSVARLERNPTVKAEIQQKGF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---PK 220
           +R     F    Y + QA D      ++       G DQ   +    ++  R  +    +
Sbjct: 121 ERTLPAGF--LVYPVSQAADITAFRASH----VPVGEDQLPMLEQTNEIVRRFNSLVGKE 174

Query: 221 LFALTSPLLTTASGT 235
           +     P+L+     
Sbjct: 175 VLTECQPILSDTGRL 189


>gi|296395159|ref|YP_003660043.1| tryptophanyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296182306|gb|ADG99212.1| tryptophanyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 339

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 80/235 (34%), Gaps = 32/235 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T SS+H G+    +   W+Q +  ++ +  +    S I  P         +   ++
Sbjct: 9   GIQATGSSIHLGNYLGAIK-QWVQLQQDYEALYFIPDQHS-ITTP---------IDPAQL 57

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN  +        +  G       +        + +   +L  +  F   +RM  F+  
Sbjct: 58  RENTLRYVAQL---LALGLDPEQCTIFVQSHVPANAQLAWVLSCLTGFGEASRMTQFKD- 113

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
               K+ +  S   F Y  L A D +     Y   L   G DQ  ++    +L ER    
Sbjct: 114 -KSDKQGEQTSVGLFTYPCLMAADILA----YQAELVPVGEDQSQHLELTRNLAERFNHR 168

Query: 219 -PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +    L  A            KM K+ S    + + M  P    + +R+
Sbjct: 169 FGETFVVPKARLVKAGARVYDLREPTKKMSKSASSESGIVQLMDEPKVSAKKFRS 223


>gi|154686561|ref|YP_001421722.1| RluB [Bacillus amyloliquefaciens FZB42]
 gi|154352412|gb|ABS74491.1| RluB [Bacillus amyloliquefaciens FZB42]
          Length = 244

 Score = 40.1 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A   +K   +K+N  +I+   +++   D      +K+
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVITELGVKVTGSDQIEVNGLKV 55


>gi|313837519|gb|EFS75233.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314927273|gb|EFS91104.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
 gi|314972725|gb|EFT16822.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
 gi|328907871|gb|EGG27634.1| pseudouridylate synthase [Propionibacterium sp. P08]
          Length = 245

 Score = 40.1 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  + 
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEEMIAAGRVEVNGELIVEQGRRVDPEH 51


>gi|300866710|ref|ZP_07111394.1| hemolysin A [Oscillatoria sp. PCC 6506]
 gi|300335310|emb|CBN56554.1| hemolysin A [Oscillatoria sp. PCC 6506]
          Length = 292

 Score = 40.1 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           L+V      S  +A+R +++  + +N  +I     ++ +        
Sbjct: 9   LLVNLDLCASRQQAQRLIRAGEVTVNQQVIDKPGTEVDILAVIKIKE 55


>gi|257457324|ref|ZP_05622495.1| tryptophan--tRNA ligase [Treponema vincentii ATCC 35580]
 gi|257445246|gb|EEV20318.1| tryptophan--tRNA ligase [Treponema vincentii ATCC 35580]
          Length = 359

 Score = 40.1 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 35/224 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T  +LH GH    +     LQ+   +   ++    ++   P            Q I E 
Sbjct: 18  PTG-NLHLGHYVGSIKNRVRLQEE-FECFFIIADLHTLTTKP----------DKQYIDEL 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS----FES 158
            + ++ +   ++  G     +++          +  +L        +V R+       + 
Sbjct: 66  ADNVRQMALDYLACGIDPEKSVIYLQS---AVPEVCELNLFFSDLVTVPRLQRIPSIKDM 122

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            ++    E  L      Y +LQA D +         L   G D   ++    ++ +R   
Sbjct: 123 AKAAHLSELPLGL--LGYPVLQAADIL----LPRANLVPVGKDNESHVELTREIAKRFNY 176

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTS 253
                   P         L+ T    KM K+L+ AI+L  +  +
Sbjct: 177 MYGEVFPLPEVMVSDYGSLVGTDGQAKMSKSLNNAIFLCDDEKT 220


>gi|227541137|ref|ZP_03971186.1| RNA-binding S4 domain protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227183097|gb|EEI64069.1| RNA-binding S4 domain protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 88

 Score = 40.1 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              + L   +  A  A +  EA+  +    I++N  +
Sbjct: 9   DDSIKLGQFLKLANLAETGGEAKNLIAEGQIRVNGEV 45


>gi|227487393|ref|ZP_03917709.1| RNA-binding S4 domain protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092617|gb|EEI27929.1| RNA-binding S4 domain protein [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 87

 Score = 40.1 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              + L   +  A  A +  EA+  +    I++N  +
Sbjct: 9   DDSIKLGQFLKLANLAETGGEAKNLIAEGQIRVNGEV 45


>gi|330948840|gb|EGH49100.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 49

 Score = 40.1 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 6/49 (12%)

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S +++I+  ++ +         F          GKK      L 
Sbjct: 1   RDLLASGSVRIDGEVV-DRSFV-----FKLGATHVCQAGKKAFGRVTLV 43


>gi|294678028|ref|YP_003578643.1| ribosomal large subunit pseudouridine synthase B [Rhodobacter
           capsulatus SB 1003]
 gi|294476848|gb|ADE86236.1| ribosomal large subunit pseudouridine synthase B [Rhodobacter
           capsulatus SB 1003]
          Length = 594

 Score = 40.1 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
              P  +++ D   R   +  +I ++G   S  +A + + +  + +N   + +  L +K 
Sbjct: 5   HETPAQTLTADTAER---IAKVIARSG-VASRRDAEKMILAGRVTVNGKKVDSPALDVKP 60

Query: 394 QD--FDSTGNI 402
            D        I
Sbjct: 61  ADKVAIDGKPI 71


>gi|58336550|ref|YP_193135.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus NCFM]
 gi|227903101|ref|ZP_04020906.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus ATCC
           4796]
 gi|58253867|gb|AAV42104.1| trp-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227869087|gb|EEJ76508.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus ATCC
           4796]
          Length = 340

 Score = 40.1 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPTKSTIYVQSQIPALFELTSYYMDLVSVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           L   G DQ   +    ++  
Sbjct: 121 DFKDSIPVGFLN--YPVSQAADITAFK----ATLIPVGDDQEPMLEQTREIVR 167


>gi|300709388|ref|YP_003735202.1| tryptophanyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123071|gb|ADJ13410.1| tryptophanyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 521

 Score = 40.1 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 19/66 (28%), Gaps = 2/66 (3%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I        +           A  G+  T    H GH      L W Q+ G   
Sbjct: 61  LMRRGVIFGHRGYDRVARAMREGEPFAALSGFMPTGDP-HIGHKLVFDELIWHQEQGGDT 119

Query: 71  ISLMGG 76
             L+  
Sbjct: 120 YGLIAD 125


>gi|257068537|ref|YP_003154792.1| putative rRNA methylase [Brachybacterium faecium DSM 4810]
 gi|256559355|gb|ACU85202.1| predicted rRNA methylase [Brachybacterium faecium DSM 4810]
          Length = 281

 Score = 40.1 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            ++ AG A S + ARR ++    + +   ++     I   
Sbjct: 9   ALLAAGLARSRSHARRIIEEGRARADGRAVTKPSTPIPPG 48


>gi|302345045|ref|YP_003813398.1| tryptophan--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149354|gb|ADK95616.1| tryptophan--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 362

 Score = 40.1 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 45/323 (13%), Positives = 88/323 (27%), Gaps = 45/323 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVELQNLGDYDKMFVFMADVQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI     +   ++  G       +          +    L  + S   V R  + ++  
Sbjct: 61  QNI---IEVALDYLSAGLSPEKCTLYIQSQIPEIAELTTFLMNLVSVSRVQRNPTVKTEI 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                E ++    F Y + QA D               G DQ   +    +L  R     
Sbjct: 118 KMRNFEANIPMGFFAYPVSQAADIAAFK----ATTVPAGEDQEPMLELTRELVRRFNQIY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------ 262
              L  P +             T    KM K+L   I+L+ +  + +   +         
Sbjct: 174 APVLVEPAIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKTMYTDPTHL 233

Query: 263 ------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA 316
                 +++   V ++    +T      +   + Q  +  +A                 +
Sbjct: 234 NVSDPGHVEGNAVFTYLDAFST-DEDFAEFWPEFQNLDELKAAYTAGGIGDMKCKKLLNS 292

Query: 317 EKAATAAMECFDMSIHSQHMPTI 339
                          + Q +P I
Sbjct: 293 VLNKMLDPIRTRRREYEQDIPEI 315


>gi|218289628|ref|ZP_03493848.1| hemolysin A [Alicyclobacillus acidocaldarius LAA1]
 gi|218240278|gb|EED07461.1| hemolysin A [Alicyclobacillus acidocaldarius LAA1]
          Length = 279

 Score = 40.1 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V  G  +S   ARR + +  ++++         ++   
Sbjct: 9   LLVARGLYSSREAARRAIMAGLVRVDGVRADKPGFKVAED 48


>gi|159036791|ref|YP_001536044.1| tryptophanyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157915626|gb|ABV97053.1| tryptophanyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 352

 Score = 40.1 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 70/233 (30%), Gaps = 34/233 (14%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH        +   Q+  ++   ++     +    + ++         +I  
Sbjct: 12  PTGK-LHLGHYVGSIANRVKLHQR--YESFFIIADLHML----TTKN------TRDDIAR 58

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVR 160
             +  + +    +  G     A                L + + +   + R+ S  +  R
Sbjct: 59  ATQNARDMVLDSLAAGIDPDTATFYLQSAIQEVGDLNTLFQNLVTVPRLERVPSLKDMAR 118

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              K E         Y +LQA D + +       +   G D   ++    +L  R     
Sbjct: 119 DAGKDEMPYGL--LGYPVLQAADILCVK----AHVVPVGKDNAAHVEVTRELARRFNHLY 172

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                    + A T  L+ T    KM K+L   I L+     P +  +    +
Sbjct: 173 GEVFPVPELVSAETPTLVGTDGRAKMSKSLGNVIALS---DEPADVRRKVMGM 222


>gi|26553585|ref|NP_757519.1| pseudouridine synthase [Mycoplasma penetrans HF-2]
 gi|26453591|dbj|BAC43923.1| pseudouridine synthase [Mycoplasma penetrans HF-2]
          Length = 298

 Score = 40.1 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 26/52 (50%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L ++V + F+ S + A+  +++N + +N  IIS    ++  +        K+
Sbjct: 7   LDILVSSKFSLSRSIAKHKIENNLVTVNGKIISKPNTKVDEESEIILKEEKI 58


>gi|311693777|gb|ADP96650.1| pseudouridine synthase family 1 protein [marine bacterium HP15]
          Length = 312

 Score = 39.7 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R+++   + IN    +     +        G + 
Sbjct: 13  ISESGMC-SRREADRYIEQGNVYINGKRATVGDQVLPGDTVKVNGQVI 59


>gi|317505010|ref|ZP_07962958.1| tryptophan--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663892|gb|EFV03611.1| tryptophan--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 361

 Score = 39.7 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 63/235 (26%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G+  +    M    ++  +    ++ R+ +    + 
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGNYDRMFVFMADVQALTDNADNPEKIRQNIIEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +     +                   L  +    +     S    N  +  E   
Sbjct: 70  YLSAGLDPQLCTLYIQSQIPE----------LAELTTYLMNLVSVSRVQRNPTVKTEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y + QA D               G DQ   I    +L  R     
Sbjct: 120 RNFEANLPMGF--FCYPVSQAADITAFK----ATTIPAGEDQEPMIELTRELARRFNQVY 173

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+ +  + +   +    
Sbjct: 174 SEVLVEPNILLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKSMYT 228


>gi|313114987|ref|ZP_07800480.1| leucyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622678|gb|EFQ06140.1| leucyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 849

 Score = 39.7 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 46/371 (12%), Positives = 103/371 (27%), Gaps = 46/371 (12%)

Query: 23  NPRELDILCSQGVVTAYIGYD---LTASSLHAGH-----LTQLMLLFWLQKTGHKPISLM 74
           + +   +         Y   +    + + LH GH        ++     Q  G+  +  M
Sbjct: 18  DEKTFHVEIDHKKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQN-GYNVLYPM 76

Query: 75  G-GGTSIIGDPSFR-DESRRMMRSQEIQENIEKIKGI-----FSSFIKYGTGKTDALMLN 127
           G     +   P+        +  +   + N++  +       FS         TD     
Sbjct: 77  GWDAFGL---PTENFAMKNHIHPAIVTKNNVDHFRSQLKALGFSFDWDREINTTDPEYYK 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              W+    Y   L       +VN     + V +  +    +     + ++ +      L
Sbjct: 134 WTQWIFLQLYKHGLA-YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHRVKSQWML 192

Query: 188 AKNYDCRLQMGGSD---------QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
                    + G D                G   G  +        T  + TT   T  G
Sbjct: 193 KITAYADKLIDGLDGLDYIERVATQQKNWIGRSHGAEVNFGTTAGDTLTVYTTRCDTLFG 252

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
            T    + ++ E      +       +   V ++         +E  R +  +  E+N+ 
Sbjct: 253 AT---YMVVSPEHAMVKEWLDKGILKNADAVKAY--------QAEAARKSDFERSELNKE 301

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKDEVSR--GMGLLT 354
           K  +  E    ++   + E     +        +     +P       E ++  G+ ++ 
Sbjct: 302 KTGVKLEGVMGINPVNDTEIPIFISDYVLSTYGTGAIMAVPAHDTRDWEFAKKFGLPIIE 361

Query: 355 LIVKAGFATST 365
           ++   G   S 
Sbjct: 362 VVK--GNTPSN 370


>gi|58039267|ref|YP_191231.1| tRNA pseudouridine synthase A [Gluconobacter oxydans 621H]
 gi|58001681|gb|AAW60575.1| tRNA pseudouridine synthase A [Gluconobacter oxydans 621H]
          Length = 264

 Score = 39.7 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            +G  +   + +AG   S  +  R ++   IK+   I+++    ++  D 
Sbjct: 18  PKGERIAKALARAG-VASRRDIERMIEDGRIKLGGQIVTHPATFVQPGDI 66


>gi|126667221|ref|ZP_01738195.1| 23S rRNA pseudouridine synthase [Marinobacter sp. ELB17]
 gi|126628377|gb|EAZ99000.1| 23S rRNA pseudouridine synthase [Marinobacter sp. ELB17]
          Length = 317

 Score = 39.7 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R+++   ++IN    S     +        G I 
Sbjct: 13  ISESGIC-SRREADRYIEQGNVRINGKRASVGDQVLPTDTVMVNGQII 59


>gi|310658781|ref|YP_003936502.1| rlub [Clostridium sticklandii DSM 519]
 gi|308825559|emb|CBH21597.1| RluB [Clostridium sticklandii]
          Length = 235

 Score = 39.7 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           M +   I   G A S  +A   ++   ++IN+S++S+   ++   D        +S 
Sbjct: 1   MRINKFIASCGIA-SRRKAEEMIQEGRVRINDSVVSDLSTKVSEIDIVKIDGKIISK 56


>gi|257054497|ref|YP_003132329.1| 30S ribosomal protein S4 [Saccharomonospora viridis DSM 43017]
 gi|256584369|gb|ACU95502.1| SSU ribosomal protein S4P [Saccharomonospora viridis DSM 43017]
          Length = 202

 Score = 39.7 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 8/60 (13%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  LL L+          AG A +  +AR+ +      +N   ++    ++   D   
Sbjct: 80  KTGDNLLQLLESRLDNVVYRAGLARTRRQARQLVSHGHFLVNGEKVNIPSYRVSKFDIID 139


>gi|219120673|ref|XP_002181070.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407786|gb|EEC47722.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 331

 Score = 39.7 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  SI   +  R   +L+L  +     S  EA R ++S  + +  +++++  + +K +D 
Sbjct: 27  PHASIFSTDTVRLSKVLSLHTE-NLVISRREAERMIRSGDVTLAGNVLTSPMMMLKEEDL 85

Query: 397 DSTGNIKLSF-GK 408
           +      L   GK
Sbjct: 86  NDGA---LKVNGK 95


>gi|221052046|ref|XP_002257599.1| tyrosyl-trna synthetase [Plasmodium knowlesi strain H]
 gi|193807429|emb|CAQ37935.1| tyrosyl-trna synthetase, putative [Plasmodium knowlesi strain H]
          Length = 385

 Score = 39.7 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 97/320 (30%), Gaps = 36/320 (11%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLM 58
               ++ LSI SE         P EL            Y G++ +   +H   G L +  
Sbjct: 40  SRRMTEILSIASE------CIQPEELKARLLLRRRLICYDGFEPSGR-MHIAQG-LLKCQ 91

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           ++  L   G   I  +    + + +   +         +     IE  K         G 
Sbjct: 92  IVNKLTSNGCTFIFWIADWFAQLNN---KMSGDLKKIRKVGNYFIEVWKS-------CGM 141

Query: 119 GKTDALMLNNETWLCSIK--YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              +   L     +      Y  L+ +I   F++NR+     +  R + E++    +  Y
Sbjct: 142 NMENVKFLWASEEINKKPNEYWSLVIDISKSFNINRIKRCLKIMGRSEGEENY-CSQIMY 200

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL----TSPLLTTA 232
             +Q  D   L    +  +   G DQ    +   +  +  K  K   +      P L   
Sbjct: 201 PCMQCADIFFL----NVDICQLGIDQRKVNMLAREYCDIKKIKKKPIILSHEMLPGLLEG 256

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN----IDDADVVSFAKRLTTLPMSEIDRMA 288
                    + AI+++          +        I++  + ++A+ +     +E   + 
Sbjct: 257 QEKMSKSDENSAIFMDDSEADVNRKIKKGYCPPGVIENNPIFAYARNIIFPHYNEFALLR 316

Query: 289 KLQGKEINEAKKIIATEITT 308
           K +         I   E   
Sbjct: 317 KEKNGGNKTYTTIAELEADY 336


>gi|126739159|ref|ZP_01754853.1| tryptophanyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719776|gb|EBA16484.1| tryptophanyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 342

 Score = 39.7 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 28/209 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              + G   T  +LH G+      L      Q    + I  M    +             
Sbjct: 8   PRVFSGIQPTG-NLHLGNYLG--ALKRFVDWQARDAETIYCMVDLHA------------- 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +   Q+ ++ ++  + + + FI  G     ++++N        +   +   +     + R
Sbjct: 52  ITVWQDPKDLMKSTRELCAGFIAAGLDPEQSILINQSQVPEHAQLAWVFNCVARMGWMQR 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+      K  Q+ S   F Y  L A D +     +   + +G  DQ  ++    D+
Sbjct: 112 MTQFKD--KAGKNAQNASLGLFAYPALMAADILV---YHATHVPVG-EDQKQHLELTRDI 165

Query: 213 GERLKTP---KLFALTSPLLTTASGTKMG 238
             +         F +T P++  A    M 
Sbjct: 166 ATKFNHDYGVDFFPITEPVIEGAGTRVMS 194


>gi|167037680|ref|YP_001665258.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320116095|ref|YP_004186254.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166856514|gb|ABY94922.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929186|gb|ADV79871.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 327

 Score = 39.7 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 61/209 (29%), Gaps = 29/209 (13%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMM 94
             + G   +   +H G+      +         ++         ++              
Sbjct: 3   KVFSGVQPSGD-IHIGNYLG--AMRQFVALQEDYECFFCAVDLHAL-------------T 46

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRM 153
             Q+ +   EK   + + ++  G       +         +     L  +    +    +
Sbjct: 47  VPQDPKVLKEKTIELAALYLAIGLDPKKVTIFIQS----HVPAHAELAWLLQCITYFGEL 102

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + + K ++S+S   F Y  L A D +     Y+      G DQ  ++    D+ 
Sbjct: 103 SRMTQFKDKSKGKESVSVGLFTYPDLMAADIL----LYNTHYVPVGEDQKQHLELTRDIA 158

Query: 214 ERLK--TPKLFALTSPLLTTASGTKMGKT 240
           +R      + F +  P++       M  T
Sbjct: 159 QRFNNRFGETFVVPEPMILKLGARIMSLT 187


>gi|319948928|ref|ZP_08023035.1| tryptophanyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437408|gb|EFV92421.1| tryptophanyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 364

 Score = 39.7 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 73/242 (30%), Gaps = 31/242 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                  G   TA S H G+    +     LQ   +     +    +I            
Sbjct: 28  KRQRVLSGIQPTADSYHLGNYLGAVRQWVELQD-DYDAYYFIPDLHAIT----------V 76

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +E++E + +        +  G     +++          +   +L  I  +    R
Sbjct: 77  KQDPKELRERVFRGCAQL---LALGVDPARSVLFVQSHVPEHAELAWVLGCITGYGEAAR 133

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+  ++  +     +   F Y +L A D + L + +   +   G DQ  ++    DL
Sbjct: 134 MTQFKD-KAAKQGTDGTTVGLFTYPVLMAADIL-LYRPHLVPV---GEDQRQHLELTRDL 188

Query: 213 GERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             R      K F +    +   S           KM K+      +   +  P    +  
Sbjct: 189 AMRFNSRYKKTFVVPEGKILEGSAKIYDLQDPTAKMSKSGENPKGIVNLLDDPKVSAKRI 248

Query: 262 RN 263
           R+
Sbjct: 249 RS 250


>gi|161506808|ref|YP_001576762.1| tryptophanyl-tRNA synthetase II [Lactobacillus helveticus DPC 4571]
 gi|160347797|gb|ABX26471.1| Tryptophanyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTG-NLHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPSKSTIYVQSQIPALFELTSYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 DFKDSIPVGFLN--YPVSQAADITAFK----ATIVPVGDDQEPMLEQTREIVR 167


>gi|134076525|emb|CAK39720.1| unnamed protein product [Aspergillus niger]
          Length = 436

 Score = 39.7 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 1/148 (0%)

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +  S     Q W   +  ++  F+ +          +            +++       M
Sbjct: 7   QHLSKPKVRQSWSKWNLYNMKRFSVKNPMFRTHFQQKWDAKSIARGYHGEQVSEKHWVRM 66

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAGFATSTNEA 368
              R  +      A    D +   Q       ++   +     L + V +A FA+ST +A
Sbjct: 67  FSPRIRSVVPMDPAKLAKDDADADQLERPFPYTQATFAPLERRLDVAVFRAMFASSTRQA 126

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDF 396
           R+ +   A+ +N   +      +   D 
Sbjct: 127 RQFVIHGAVTVNGKKMRYPGYLLNPGDL 154


>gi|78484663|ref|YP_390588.1| ribosomal protein S4 [Thiomicrospira crunogena XCL-2]
 gi|90101733|sp|Q31IV9|RS4_THICR RecName: Full=30S ribosomal protein S4
 gi|78362949|gb|ABB40914.1| SSU ribosomal protein S4P [Thiomicrospira crunogena XCL-2]
          Length = 206

 Score = 39.7 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              + + S G+ LL L+           GFA++  EAR+ +   +I++N   ++    ++
Sbjct: 78  EADRRKGSTGVNLLQLLESRLDNVVYRMGFASTRAEARQLVSHKSIQVNGQSVNIPSYEV 137

Query: 392 KLQDFDSTGN 401
              D  S   
Sbjct: 138 SAGDVISIRE 147


>gi|85704569|ref|ZP_01035671.1| tryptophanyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670977|gb|EAQ25836.1| tryptophanyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 342

 Score = 39.7 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 65/209 (31%), Gaps = 28/209 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              + G   +  +LH G+      L      Q  G + +  M    +             
Sbjct: 8   PRVFSGIQPSG-NLHLGNYLG--ALKRFAEAQNKGIQTLYCMVDLHA------------- 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +   QE  +     + + + FI  G     +++ N        +   +   +     + R
Sbjct: 52  VTVWQEPADLARATRELAAGFIASGLDPAKSILFNQSQVAEHSQMAWVFNCVARMGWMQR 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+      K  Q+ S   F Y  L A D +     +   + +G  DQ  ++    D+
Sbjct: 112 MTQFKD--KAGKNAQNASLGLFAYPALMAADILT---YHATHVPVG-EDQKQHLELTRDI 165

Query: 213 GERLKTP---KLFALTSPLLTTASGTKMG 238
             +         F +  P++  +    M 
Sbjct: 166 AMKFNHDYGVDFFPIPEPVIEGSGTRVMS 194


>gi|326797290|ref|YP_004315110.1| pseudouridine synthase Rsu [Marinomonas mediterranea MMB-1]
 gi|326548054|gb|ADZ93274.1| pseudouridine synthase Rsu [Marinomonas mediterranea MMB-1]
          Length = 355

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 2/59 (3%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
               + +   I ++G   S  EA R +   ++ IN          +   D        +
Sbjct: 3   FKTSIRINKYISESGLC-SRREADRFIDQGSVFINGKRAGTGDQ-VSPGDLVKVNGQII 59


>gi|308174106|ref|YP_003920811.1| pseudouridine synthase [Bacillus amyloliquefaciens DSM 7]
 gi|307606970|emb|CBI43341.1| pseudouridine synthase [Bacillus amyloliquefaciens DSM 7]
 gi|328552765|gb|AEB23257.1| pseudouridine synthase [Bacillus amyloliquefaciens TA208]
 gi|328912437|gb|AEB64033.1| pseudouridine synthase [Bacillus amyloliquefaciens LL3]
          Length = 244

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A   +K   +K+N  +I+   +++   D      +K+
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVITELGVKVTGSDQIEVNGLKV 55


>gi|291536988|emb|CBL10100.1| Uncharacterized conserved protein [Roseburia intestinalis M50/1]
 gi|291539808|emb|CBL12919.1| Uncharacterized conserved protein [Roseburia intestinalis XB6B4]
          Length = 71

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD- 397
           I I   E    + L   + KAG   S  +A+  ++   +K+N         +I   D   
Sbjct: 2   IEIQIRETDEFIKLGQALKKAGLVESGVDAKFVIQDGLVKVNGETELQRGKKIHDGDLIS 61

Query: 398 -STGNIKLSF 406
            +   +K+S 
Sbjct: 62  YNGETVKVSK 71


>gi|255535111|ref|YP_003095482.1| Ribosomal large subunit pseudouridine synthase B [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341307|gb|ACU07420.1| Ribosomal large subunit pseudouridine synthase B [Flavobacteriaceae
           bacterium 3519-10]
          Length = 371

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +SK+     + L   I  +G   S  EA   +    +++N ++++    Q++  D
Sbjct: 129 KLSKEVPKETIRLNKYIANSGIC-SRREADELITQGLVQVNGAVVTEMGYQVQKTD 183


>gi|237653971|ref|YP_002890285.1| 30S ribosomal protein S4 [Thauera sp. MZ1T]
 gi|237625218|gb|ACR01908.1| ribosomal protein S4 [Thauera sp. MZ1T]
          Length = 209

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  LL L+         + GF  S  EAR+ ++ N + +N   ++     ++  D
Sbjct: 90  GENLLQLLEGRLDAVAYRMGFGASRAEARQVVRHNGVLVNGKRVNIPSYVVRPGD 144


>gi|152989816|ref|YP_001355538.1| RNA pseudouridine synthase [Nitratiruptor sp. SB155-2]
 gi|151421677|dbj|BAF69181.1| RNA pseudouridine synthase [Nitratiruptor sp. SB155-2]
          Length = 260

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIK 403
           S  EA R ++   +K+N  I+      ++  D  F     IK
Sbjct: 14  SRREADRLIQEGFVKVNRQIVKEPFYDVQEGDKVFVKGKLIK 55


>gi|289579115|ref|YP_003477742.1| ribosomal protein S4 [Thermoanaerobacter italicus Ab9]
 gi|297545302|ref|YP_003677604.1| 30S ribosomal protein S4 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289528828|gb|ADD03180.1| ribosomal protein S4 [Thermoanaerobacter italicus Ab9]
 gi|296843077|gb|ADH61593.1| ribosomal protein S4 [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 206

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+ +         GFA S  +AR+ +    I++N   +      +K  D  S  
Sbjct: 89  GENLLQLLERRLDNVVYRLGFAVSRRQARQLVSHGHIEVNGKKVDIPSFLVKPGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|256827112|ref|YP_003151071.1| tryptophanyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583255|gb|ACU94389.1| tryptophanyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 384

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 66/236 (27%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 34  PTGR-LHVGHYVGSLRERVALQNSGTFDEIFIMIADAQAL---------TDNADNPEKVR 83

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI     +   ++  G       +          +       + +   V R  + +S  
Sbjct: 84  QNI---VEVALDYLSCGIDPAKTTIFIQSQIPELFELTSYYMNLVTVARVQRNPTVKSEI 140

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--T 218
                   +    F Y I QA D               G DQ   I    ++        
Sbjct: 141 QMRGFAADVPCGFFTYPISQASDITAFK----ATTVPVGVDQLPMIEQTREIVRSFNRTY 196

Query: 219 PKLFALTSPLLTT----------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             +      L+ T              KM K+L   I+L     SP       R++
Sbjct: 197 GPVLIEPEALIPTEESSKRLPGIDGKAKMSKSLGNGIYLA---DSPEEVAAKVRSM 249


>gi|110632789|ref|YP_672997.1| pseudouridine synthase, Rsu [Mesorhizobium sp. BNC1]
 gi|110283773|gb|ABG61832.1| Pseudouridine synthase, Rsu [Chelativorans sp. BNC1]
          Length = 466

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            I +D  + G  +   + +AG A S  +A   +++  +K+N  ++S+    ++  D   
Sbjct: 39  EIREDGRTDGERIAKRLARAGLA-SRRDAEAMIEAGRVKVNGRVLSSPAFNVRPSDRIE 96


>gi|315283294|ref|ZP_07871515.1| tryptophan--tRNA ligase [Listeria marthii FSL S4-120]
 gi|313613056|gb|EFR86977.1| tryptophan--tRNA ligase [Listeria marthii FSL S4-120]
          Length = 331

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   ++    +    + I  P  R + R  
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITVPQDRLKLR-- 56

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                     E+ + + + ++  G     A +          +   +L+       + RM
Sbjct: 57  ----------EQTRSLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSDGKAGVSAGLLTYPPLMAADIL----LYQTDLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|299534954|ref|ZP_07048282.1| GerA spore germination protein [Lysinibacillus fusiformis ZC1]
 gi|298729596|gb|EFI70143.1| GerA spore germination protein [Lysinibacillus fusiformis ZC1]
          Length = 491

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 61/197 (30%), Gaps = 1/197 (0%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           + L+  EF   + +    +     +D        ++  N I              ++L  
Sbjct: 187 EGLTNPEFVSTVKEKISEINFDLFFDSSQVAAFMEEHQNSIFPQFQQTDRPDIVAYSLGL 246

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
             +T          L   I       SP ++   W       ++ +A  + ++ +     
Sbjct: 247 GKITLLVDNT-PFALVAPITFFHLFQSPEDYINRWIVASFLRIIRYASFVLSITLIPFYV 305

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
                  ++   + ++    +  +       +A    +    +   S  MPT +     V
Sbjct: 306 ALTTHHYQMIPMQTLLVLVESRSMLPFTPFWEAFIMLIFIEIIKEASLRMPTKTGQTLGV 365

Query: 347 SRGMGLLTLIVKAGFAT 363
             G+ +    V+AGFA+
Sbjct: 366 IGGIVIGQAAVEAGFAS 382


>gi|313125802|ref|YP_004036072.1| SSU ribosomal protein s4e [Halogeometricum borinquense DSM 11551]
 gi|312292167|gb|ADQ66627.1| SSU ribosomal protein S4E [Halogeometricum borinquense DSM 11551]
          Length = 236

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G+ LL L+    G+  +  EAR  L  + + +N   IS+E+  I + D  
Sbjct: 34  EAGVPLLILLRDVLGYVDNKKEARYALNQDGVLVNGDAISDEQRPIGMFDIL 85


>gi|55379554|ref|YP_137404.1| tryptophanyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232279|gb|AAV47698.1| tryptophanyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 549

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R +     +     A  G+  T    H GH      + W Q+ G   
Sbjct: 88  LMRRGVIFGHRDYRPVADAMRNDDPFAALSGFMPTGDP-HIGHKLVFDEIIWHQQQGGDA 146

Query: 71  ISLMGG 76
            +L+  
Sbjct: 147 YALIAD 152


>gi|260773125|ref|ZP_05882041.1| tryptophanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612264|gb|EEX37467.1| tryptophanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 49/174 (28%), Gaps = 19/174 (10%)

Query: 45  TASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           T   LH GH    +     LQ   H+   L+     +         +       ++  NI
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQDI-HEQTVLVADMQGL---------TDNAHNPNKVSSNI 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +       +     KT   + +    L  +          S    N  +  E      
Sbjct: 69  LNVVA-DYLAVGIDPCKTTICLQSQLPALAELTMYYSNLVTISRLERNPTVKSEIQSKGF 127

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           +R     F    Y I QA D       ++  L   G DQ   +    ++  ++ 
Sbjct: 128 ERSIPAGF--LTYPISQAADIT----GFNATLVPVGDDQLPMLEQTNEIVRKIN 175


>gi|212715757|ref|ZP_03323885.1| hypothetical protein BIFCAT_00657 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661124|gb|EEB21699.1| hypothetical protein BIFCAT_00657 [Bifidobacterium catenulatum DSM
           16992]
          Length = 260

 Score = 39.7 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +++ G   S ++A+R +    + +N   I+    ++   D  
Sbjct: 22  ALLERGLIGSRSKAQRLIADGKVSVNGVDITKVSTKVGCDDII 64


>gi|116491760|ref|YP_811304.1| tryptophanyl-tRNA synthetase II [Oenococcus oeni PSU-1]
 gi|118587427|ref|ZP_01544852.1| tryptophanyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|290891396|ref|ZP_06554457.1| hypothetical protein AWRIB429_1847 [Oenococcus oeni AWRIB429]
 gi|116092485|gb|ABJ57639.1| tryptophanyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|118432077|gb|EAV38818.1| tryptophanyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|290479042|gb|EFD87705.1| hypothetical protein AWRIB429_1847 [Oenococcus oeni AWRIB429]
          Length = 341

 Score = 39.7 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 60/223 (26%), Gaps = 31/223 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G +    ++    +      F D +R      E   
Sbjct: 12  PTGK-LHIGHYVGSLKNRVEMQNSGNYDSFVMIADTQA------FTDNARDP----EKIR 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N      +    +     KT   + +    L  +    +     +    N  +  E  + 
Sbjct: 61  NSLTEVALDYLAVGLDPKKTTIFVQSQIKGLFELTEYYMNLVSVARLQRNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---- 217
                  + F  F Y + QA D               G DQ   I    +L         
Sbjct: 121 GFGESVPVGF--FTYPVSQAADITIFRAQK----VPAGDDQEPMIEQARELVRSFNSAYH 174

Query: 218 ----TPKLFALTSPLLTT----ASGTKMGKTLSGAIWLNKEMT 252
                          L          KM K+L  AI+L+ +  
Sbjct: 175 TDTLVEPEGVFPPNGLGRIPGIDGNAKMSKSLGNAIYLSDDED 217


>gi|319787863|ref|YP_004147338.1| pseudouridine synthase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466375|gb|ADV28107.1| pseudouridine synthase [Pseudoxanthomonas suwonensis 11-1]
          Length = 268

 Score = 39.7 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           GL  ++ KAG   S  EA R +++  ++++  I+ + + 
Sbjct: 25  GLARVLSKAGLC-SRTEAARWIEAGRVQVDGRIVRDPEY 62


>gi|313673441|ref|YP_004051552.1| SSU ribosomal protein s4p [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940197|gb|ADR19389.1| SSU ribosomal protein S4P [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 208

 Score = 39.7 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+ +        AGFA+S  +AR+ ++ N   +N   ++     +K+ D     
Sbjct: 89  GENLLQLLERRLDNAVYRAGFASSRTQARQLVRHNHFTVNGKKVNIPSYLLKVGDVIELR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|307244571|ref|ZP_07526676.1| ribosomal protein S4 [Peptostreptococcus stomatis DSM 17678]
 gi|306492098|gb|EFM64146.1| ribosomal protein S4 [Peptostreptococcus stomatis DSM 17678]
          Length = 201

 Score = 39.7 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A S  +AR+ +    I +N   +      + + D  S   
Sbjct: 93  NLVYRMGLANSIRQARQMVSHGNIHVNGRKVDIPSYIVSVGDEISLRE 140


>gi|218264461|ref|ZP_03478294.1| hypothetical protein PRABACTJOHN_03990 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221954|gb|EEC94604.1| hypothetical protein PRABACTJOHN_03990 [Parabacteroides johnsonii
           DSM 18315]
          Length = 249

 Score = 39.7 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   +++  +++N+ +++    +I  QD
Sbjct: 8   ADPNEPIRLNKFLSNAGVC-SRREADEFIQAGVVQVNDQVVTELGTKITRQD 58


>gi|328951538|ref|YP_004368873.1| pseudouridine synthase Rsu [Marinithermus hydrothermalis DSM 14884]
 gi|328451862|gb|AEB12763.1| pseudouridine synthase Rsu [Marinithermus hydrothermalis DSM 14884]
          Length = 243

 Score = 39.7 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +  ++   GF  +  E +R L++  ++++  ++ +  +++   
Sbjct: 8   IDKILAHLGF-GTRKEVKRLLRAGGVRVDGRVVRDPGMKLDPA 49


>gi|296332250|ref|ZP_06874712.1| pseudouridine synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674952|ref|YP_003866624.1| pseudouridine synthase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150564|gb|EFG91451.1| pseudouridine synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413196|gb|ADM38315.1| pseudouridine synthase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 244

 Score = 39.7 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A   +K   +K+N  +++   +++   D      +K+
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKV 55


>gi|260777457|ref|ZP_05886351.1| tryptophanyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607123|gb|EEX33397.1| tryptophanyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 341

 Score = 39.7 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 88/331 (26%), Gaps = 33/331 (9%)

Query: 45  TASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           T   LH GH    +     LQ+T H    L+     +         +      +++  NI
Sbjct: 21  TGP-LHLGHYVGSLKQRVALQET-HDQTILVADMQGL---------TDNAHNPKKVSSNI 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +       +     KT   + +    L  +          S    N  +  E      
Sbjct: 70  LNVVA-DYLAVGIDPSKTTICLQSQLPALAELTMYYSNLVSISRLERNPTVKNEIQNKGF 128

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           +R     F    Y I QA D       ++  L   G DQ   +    ++  ++ +     
Sbjct: 129 ERSIPAGF--LTYPISQAADIT----GFNASLVPVGDDQLPMLEQTNEIVRKINS----- 177

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
                LT  +  +   + +  +                 N+   +        +      
Sbjct: 178 --LAGLTVLNECRPLLSNAPRLPSTDGKNKMSKTMGNTINLSSTEKEIKTAVNSMYTDPN 235

Query: 284 IDRMAKLQGKEINEA-KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM-----P 337
             R+      E N     + A         + +         +     +  + +     P
Sbjct: 236 HLRVEDPGNIEGNIVFTYLDAFHPDEDYVDQLKEHYRRGGLGDGQTKKVLEECLQDLLRP 295

Query: 338 TISISKDEVSRGMGLLTLIVK-AGFATSTNE 367
                 D ++    L+ ++ K +  + S  E
Sbjct: 296 IRERRADYLNDKAQLIDILKKGSQISRSKTE 326


>gi|257387888|ref|YP_003177661.1| ribosomal protein S4E, central domain protein [Halomicrobium
           mukohataei DSM 12286]
 gi|257170195|gb|ACV47954.1| Ribosomal protein S4E, central domain protein [Halomicrobium
           mukohataei DSM 12286]
          Length = 265

 Score = 39.7 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G+ LL ++    G+  S  EAR  L ++++ IN   +S+E+  + + D  
Sbjct: 34  EAGVPLLIVLRDVLGYVDSRKEARYALNNDSVLINGKAVSDEERPVGMFDIL 85


>gi|167036828|ref|YP_001664406.1| 30S ribosomal protein S4 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039547|ref|YP_001662532.1| 30S ribosomal protein S4 [Thermoanaerobacter sp. X514]
 gi|256752659|ref|ZP_05493511.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus CCSD1]
 gi|300915202|ref|ZP_07132517.1| ribosomal protein S4 [Thermoanaerobacter sp. X561]
 gi|307725126|ref|YP_003904877.1| 30S ribosomal protein S4 [Thermoanaerobacter sp. X513]
 gi|320115250|ref|YP_004185409.1| 30S ribosomal protein S4 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|226695091|sp|B0KCM7|RS4_THEP3 RecName: Full=30S ribosomal protein S4
 gi|226695092|sp|B0K5S0|RS4_THEPX RecName: Full=30S ribosomal protein S4
 gi|166853787|gb|ABY92196.1| RNA-binding S4 domain protein [Thermoanaerobacter sp. X514]
 gi|166855662|gb|ABY94070.1| RNA-binding S4 domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|256748479|gb|EEU61531.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus CCSD1]
 gi|300888926|gb|EFK84073.1| ribosomal protein S4 [Thermoanaerobacter sp. X561]
 gi|307582187|gb|ADN55586.1| ribosomal protein S4 [Thermoanaerobacter sp. X513]
 gi|319928341|gb|ADV79026.1| ribosomal protein S4 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 206

 Score = 39.7 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  +AR+ +    I++N   +      +K  D  S  
Sbjct: 89  GENLLQLLERRLDNVVFRLGFAASRPQARQLVSHGHIEVNGKKVDIPSFLVKPGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|320529115|ref|ZP_08030207.1| ribosomal RNA large subunit methyltransferase J [Selenomonas
           artemidis F0399]
 gi|320138745|gb|EFW30635.1| ribosomal RNA large subunit methyltransferase J [Selenomonas
           artemidis F0399]
          Length = 268

 Score = 39.7 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 10/63 (15%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDF--DSTGNIKL 404
           L+V  G A S   A+R + +  + ++   +         +  L++  +D    S G +KL
Sbjct: 9   LLVAQGLAPSRERAKRLIMAGQVLVDERRVDKAGTTVDADASLRVTGEDLPYVSRGGLKL 68

Query: 405 SFG 407
           + G
Sbjct: 69  AKG 71


>gi|299141527|ref|ZP_07034663.1| ribosomal large subunit pseudouridine synthase B [Prevotella oris
           C735]
 gi|298576863|gb|EFI48733.1| ribosomal large subunit pseudouridine synthase B [Prevotella oris
           C735]
          Length = 490

 Score = 39.7 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N ++++    ++   D     +  +
Sbjct: 250 DPNEPIRLNKYLANAGVC-SRREADEFISAGVVSVNGTVVTELGTKVLRSDEVKFHDQLV 308

Query: 405 SFGKKNHIICH 415
           S  KK +++ +
Sbjct: 309 SLEKKVYVLLN 319


>gi|86356557|ref|YP_468449.1| hemolysin protein [Rhizobium etli CFN 42]
 gi|86280659|gb|ABC89722.1| hemolysin protein [Rhizobium etli CFN 42]
          Length = 248

 Score = 39.7 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                L  L+V  G   S + AR  ++   ++I   +++
Sbjct: 4   QNSQRLDQLLVSRGLFASRSRARDAVQRGTVRIGGQLVT 42


>gi|295688343|ref|YP_003592036.1| RNA-binding S4 domain-containing protein [Caulobacter segnis ATCC
           21756]
 gi|295430246|gb|ADG09418.1| RNA-binding S4 domain protein [Caulobacter segnis ATCC 21756]
          Length = 256

 Score = 39.7 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + +    +   + ++G   S  EA + +    + I+  ++ +   +I+  
Sbjct: 8   DEAEPQRVNKWLAQSGVC-SRREAEQLISDGLVSIDGEVVEDVGRKIQPG 56


>gi|257052743|ref|YP_003130576.1| tryptophanyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691506|gb|ACV11843.1| Tryptophan--tRNA ligase [Halorhabdus utahensis DSM 12940]
          Length = 537

 Score = 39.7 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 9/73 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R +      G       G+  T    H GH      + W Q+ G   
Sbjct: 75  LMRRGVIFGHRDYRPVARAMRDGDPFAVLSGFMPTGDP-HIGHKLVFDEIIWHQRQG--- 130

Query: 71  ISLMGGGTSIIGD 83
               G    +I D
Sbjct: 131 ----GDAYGLIAD 139


>gi|16125108|ref|NP_419672.1| RNA pseudouridylate synthase [Caulobacter crescentus CB15]
 gi|221233835|ref|YP_002516271.1| ribosomal large subunit pseudouridine synthase F [Caulobacter
           crescentus NA1000]
 gi|13422112|gb|AAK22840.1| RNA pseudouridylate synthase, putative [Caulobacter crescentus
           CB15]
 gi|220963007|gb|ACL94363.1| ribosomal large subunit pseudouridine synthase F [Caulobacter
           crescentus NA1000]
          Length = 255

 Score = 39.7 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + +    +   + ++G   S  EA + +    + I+  ++ +   +I+  
Sbjct: 8   DEAEPQRVNKWLAQSGVC-SRREAEQLISDGLVSIDGEVVEDVGRKIQPG 56


>gi|221319479|ref|ZP_03600773.1| RluB [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221323755|ref|ZP_03605049.1| RluB [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767501|ref|NP_390197.2| pseudouridine synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|321311788|ref|YP_004204075.1| pseudouridine synthase [Bacillus subtilis BSn5]
 gi|251757325|sp|P35159|RLUB_BACSU RecName: Full=Ribosomal large subunit pseudouridine synthase B;
           AltName: Full=rRNA pseudouridylate synthase B; AltName:
           Full=rRNA-uridine isomerase B
 gi|225185129|emb|CAB14248.2| pseudouridine synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|291484745|dbj|BAI85820.1| pseudouridine synthase [Bacillus subtilis subsp. natto BEST195]
 gi|320018062|gb|ADV93048.1| pseudouridine synthase [Bacillus subtilis BSn5]
          Length = 244

 Score = 39.7 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A   +K   +K+N  +++   +++   D      +K+
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKV 55


>gi|71021869|ref|XP_761165.1| hypothetical protein UM05018.1 [Ustilago maydis 521]
 gi|46100645|gb|EAK85878.1| hypothetical protein UM05018.1 [Ustilago maydis 521]
          Length = 464

 Score = 39.7 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                MPT S+   +V R + ++  + ++ FA S  E+R  +    + +N    SN    
Sbjct: 142 EEMDPMPTASLFMRDVERRLDVV--VFRSCFARSAYESRSMVVQGKVTLNGVKCSNPNQL 199

Query: 391 IKLQDFDS 398
           ++  D  S
Sbjct: 200 LEPGDLIS 207


>gi|297568048|ref|YP_003689392.1| tryptophanyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296923963|gb|ADH84773.1| tryptophanyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 321

 Score = 39.7 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 30/217 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+   +M         H+  + +    ++    S  D  R  + +  ++
Sbjct: 6   GIQPSGQ-LHIGNYFGMMQPMISNMAEHELYAFIVDLHAL---TSVHDAQR--LATGTLE 59

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             ++ +             ++D   +   TW            + +   +  +    S +
Sbjct: 60  AAVDFMALGLEPERCIFWVQSDVPEVTELTW-----------VLSTLTPMGLLERCHSYK 108

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--T 218
            ++ +  + S   F Y +L A D + L +     +   G DQ  ++    D+  +     
Sbjct: 109 DKIAKGIASSHGLFAYPVLMAADIL-LYQAQRVPV---GKDQKQHLEVARDIAIKFNSLF 164

Query: 219 PKLFALTSPLL-------TTASGTKMGKTLSGAIWLN 248
              F L  P++           G KM K+    I + 
Sbjct: 165 GDTFVLPEPVIDADLAVVPGLDGQKMSKSYGNTIPIF 201


>gi|224531550|ref|ZP_03672182.1| tryptophanyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511015|gb|EEF81421.1| tryptophanyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 350

 Score = 39.7 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 91/322 (28%), Gaps = 34/322 (10%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQE-DYETYFIIADLHTLTTKPDLKS-------INTIPY 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+   + +   ++  G       +          +  +L        +V R+    S++ 
Sbjct: 62  NV---REMVLDYLACGINPNKVSIYLQSAI---PELFELYLIFSMIVTVARLQRIPSIKD 115

Query: 162 RLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
                  + + +    Y +L + D +         L   G D   +I    +L  R    
Sbjct: 116 MSIAAGLKEIPYGLLGYPVLMSADILMAK----ANLVPVGRDNESHIEFTRELARRFNHL 171

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                      +F  + PL+      KM K+L+ AI+LN                 +   
Sbjct: 172 YKDNFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDSENLLEKKIMSMYTDPNRIR 231

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                 +   P+     +     +E+ + K          V  +++   A    ++    
Sbjct: 232 ADIPGNVENNPVFIYHSIFNSNHEEVEDLKSRYKKGKVGDVEVKKKLFLALNNFLKPIRD 291

Query: 330 SIHSQHMPTISISKDEVSRGMG 351
                         + +  G  
Sbjct: 292 KRSFYEAKKKDYVDEIIFDGTS 313


>gi|239618238|ref|YP_002941560.1| ribosomal protein S4 [Kosmotoga olearia TBF 19.5.1]
 gi|259495284|sp|C5CGH5|RS4_KOSOT RecName: Full=30S ribosomal protein S4
 gi|239507069|gb|ACR80556.1| ribosomal protein S4 [Kosmotoga olearia TBF 19.5.1]
          Length = 208

 Score = 39.7 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA+S  +AR+ +    + +N   ++     ++  D      
Sbjct: 108 GFASSRKQARQLVSHGHVLVNGRKVNKASYSVRPGDIIEIKE 149


>gi|183220527|ref|YP_001838523.1| tryptophanyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910636|ref|YP_001962191.1| tryptophanyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775312|gb|ABZ93613.1| Tryptophan--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778949|gb|ABZ97247.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase; TrpRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 322

 Score = 39.7 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 32/223 (14%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q +  +    +    ++    +FR +    +
Sbjct: 1   MRVLTGLQPSGK-LHLGNYFSAIKKILDYQ-SKEELFLFIANLHAL---TTFRSKEE--L 53

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           +   I   I+ +             ++D   +   TW            +    +V+++ 
Sbjct: 54  KEYTIGCAIDLLALGVDPNKTVFWVQSDVPEVTELTWY-----------LSQSITVSQLQ 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +        F Y IL A D + L       +   G DQ  ++    D+ E
Sbjct: 103 LAHSFKDKVAKGFVPGAGLFTYPILMASDIL-LFSAEKVPV---GKDQKQHLEFARDIAE 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLN 248
           R  T     LT P          +    G KM K+    I   
Sbjct: 159 RFNTQFGSVLTIPEPDIDENTATVPGVDGAKMSKSYQNTIDFF 201


>gi|328479049|gb|EGF48515.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 36

 Score = 39.7 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 8  FLSILSERGFIHQISNPRELDILCSQG 34
           L  L  RG ++Q+++   L  L  +G
Sbjct: 9  ILDELKWRGALNQLTDEAGLRKLTEEG 35


>gi|307266987|ref|ZP_07548503.1| ribosomal protein S4 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326390634|ref|ZP_08212189.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus JW 200]
 gi|306917972|gb|EFN48230.1| ribosomal protein S4 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325993312|gb|EGD51749.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus JW 200]
          Length = 206

 Score = 39.7 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+ +         GFA S  +AR+ +    I++N   +      +K  D  S  
Sbjct: 89  GENLLQLLERRLDNVVYRLGFAASRPQARQLVSHGHIEVNGKKVDIPSFLVKPGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|257386731|ref|YP_003176504.1| tryptophanyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169038|gb|ACV46797.1| tryptophanyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 540

 Score = 39.7 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 9/73 (12%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R +           A  G+  T    H GH      + W Q+ G   
Sbjct: 84  LMRRGVIFGHRDYRPVARAMREGEPFAALSGFMPTGDP-HIGHKLVFDEIIWHQERG--- 139

Query: 71  ISLMGGGTSIIGD 83
               G    +I D
Sbjct: 140 ----GDAYGLIAD 148


>gi|25027252|ref|NP_737306.1| tryptophanyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259506611|ref|ZP_05749513.1| tryptophan--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|39932212|sp|Q8FRR3|SYW_COREF RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|23492533|dbj|BAC17506.1| putative tryptophanyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
 gi|259165809|gb|EEW50363.1| tryptophan--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 346

 Score = 39.7 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 80/258 (31%), Gaps = 33/258 (12%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFR 87
              +Q       G   TA S H G+    +     LQ + +     +    +I  D    
Sbjct: 7   DHTAQTPARVLSGIQPTADSYHLGNYLGAVKQWIDLQNS-YDAFYFIPDLHAITVD---- 61

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                    +E++             +  G     + +          +   +L  +  F
Sbjct: 62  ------QNPEELRARTVSGAAQL---LALGIDPERSTLFVQSHIPAHAELSWVLTCLTGF 112

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +RM  F+  +S  +  +  S   F Y +L A D + L +     +   G DQ  ++ 
Sbjct: 113 GEASRMTQFKD-KSTKQGAERTSAGLFTYPMLMAADIL-LYRPQLVPV---GEDQRQHLE 167

Query: 208 CGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYN 256
               L ER       +F +    +   +           KM K+      L   +  P  
Sbjct: 168 LTRTLAERFNNRFGTVFEVPEGFIPEGASKIYDLQNPTAKMSKSGENPKGLINLLDDPKV 227

Query: 257 FWQYWRN--IDDADVVSF 272
             +  ++   D+  V++F
Sbjct: 228 SSKRIKSAVTDNDGVIAF 245


>gi|46908432|ref|YP_014821.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47091867|ref|ZP_00229662.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224806|ref|YP_002758913.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825238|ref|ZP_05230239.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853323|ref|ZP_05242671.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931689|ref|ZP_05265048.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255520168|ref|ZP_05387405.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763993|ref|ZP_07073989.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461794|sp|Q71XG7|SYW_LISMF RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|46881703|gb|AAT04998.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47019878|gb|EAL10616.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225877268|emb|CAS05982.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|258606686|gb|EEW19294.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583244|gb|EFF95276.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594484|gb|EFG02245.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515334|gb|EFK42385.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|332312650|gb|EGJ25745.1| Tryptophanyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 331

 Score = 39.7 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   ++    +    + I  P  R + R  
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITVPQDRLKLR-- 56

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                     E+ + + + ++  G     A +          +   +L+       + RM
Sbjct: 57  ----------EQTRSLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSDGKAGVSAGLLTYPPLMAADIL----LYQTDLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|320353891|ref|YP_004195230.1| RNA-binding S4 domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122393|gb|ADW17939.1| RNA-binding S4 domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 97

 Score = 39.7 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 23/57 (40%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           + L  L+ +     S  EAR  +    + +N  +   ++ +++  D  + G   L  
Sbjct: 23  IELDKLLKRENLTASGGEARYLISQGLVLVNGIVELRKRRKLRSGDVVTCGETTLRV 79


>gi|313159346|gb|EFR58710.1| pseudouridylate synthase [Alistipes sp. HGB5]
          Length = 423

 Score = 39.7 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            + ++G   S  EA   + +  + +N  I++    ++   D     + ++  G+K   + 
Sbjct: 194 FLAQSGLC-SRREADDFITAGLVTVNGQIVTQLGTKVLPTDEVKFNDSRVQ-GEKKVYLV 251


>gi|225570327|ref|ZP_03779352.1| hypothetical protein CLOHYLEM_06424 [Clostridium hylemonae DSM
           15053]
 gi|225160859|gb|EEG73478.1| hypothetical protein CLOHYLEM_06424 [Clostridium hylemonae DSM
           15053]
          Length = 69

 Score = 39.7 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 15/36 (41%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
              + L   +  AG   S  EA+  ++   +K+N  
Sbjct: 8   EEFIKLGQALKAAGLVDSGVEAKEVIQDGLVKVNGE 43


>gi|216263852|ref|ZP_03435846.1| tryptophanyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215979896|gb|EEC20718.1| tryptophanyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 346

 Score = 39.7 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 71/223 (31%), Gaps = 34/223 (15%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS-------INTIPF 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+   + +   ++  G       +          +  +L        +V R+    S++ 
Sbjct: 62  NV---REMVLDYLACGINPNKVSIYLQSAI---PELFELYLIFSMIVTVARLQRIPSIKD 115

Query: 162 RLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
                  + + +    Y +L + D +         L   G D   +I    +L  R    
Sbjct: 116 MSIAAGLKEIPYGLLGYPVLMSADILMAK----ANLVPVGRDNESHIEFARELARRFNHL 171

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                      +F  + PL+      KM K+L  AI+LN +  
Sbjct: 172 YKNNFFPIPESVFTDSRPLVGICGKNKMSKSLDNAIFLNDDEN 214


>gi|313888127|ref|ZP_07821801.1| tryptophan--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845817|gb|EFR33204.1| tryptophan--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 330

 Score = 39.7 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 76/252 (30%), Gaps = 25/252 (9%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +     Y G   +  SL  G+    +     LQ   +    ++    +            
Sbjct: 2   EDKKIVYSGIQPSG-SLTIGNYIGALKNFIGLQDEYNCLYCIV-DMHA------------ 47

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-V 150
            +  +QE ++  +    + + ++  G     +++         +     L  + +  + +
Sbjct: 48  -ITVAQEPKDLRKNTLDVLALYLAAGLDPKKSIIYIQS----HVPAHAELGWVLNTMTGL 102

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            ++      + + K+   +     NY +L A D +     Y       G DQ  +I    
Sbjct: 103 GQLQRMTQFKDKAKKYTDVQAGLLNYPVLMAADIL----LYQSSFVPVGEDQKQHIEITR 158

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           DL +R  +      T P + T        +L        +     + +    + +D    
Sbjct: 159 DLAQRFNSRYSETFTIPEILTPKVGARIMSLKDPSSKMSKSDPNKDGYILLLDSEDDTRK 218

Query: 271 SFAKRLTTLPMS 282
              + +T     
Sbjct: 219 KIKRAVTDSSGE 230


>gi|192289766|ref|YP_001990371.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192283515|gb|ACE99895.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 736

 Score = 39.7 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                  G  +  ++ +AG   S  +A   +    + +N  +I +  L +K  D  
Sbjct: 402 PAKSDKAGERIAKVVARAGLC-SRRDAEAWITEGRVTVNGKVIDSPALDVKASDVI 456


>gi|86740572|ref|YP_480972.1| tryptophanyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86567434|gb|ABD11243.1| tryptophanyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 370

 Score = 39.7 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 58/197 (29%), Gaps = 22/197 (11%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIG 82
           EL+ L         +  G   T   LH GH    +     LQ  G +   ++     +  
Sbjct: 33  ELEELILSNPERFRVLTGDRPTGR-LHLGHYFGTLHNRVRLQDLGTEIFLIIADYQVL-- 89

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
             + RD +   + +   +  ++ +              +    LN          +  L 
Sbjct: 90  --TDRDVAD-NLTAHVEELVLDYLAIGIDPARSTIFTHSAVPALNQL-------MLPFLS 139

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +            E +     R+ ++S L + Y + QA D +         L   G DQ
Sbjct: 140 LVSVAELNRNPTVKEEIA--HSRQSAVSGLMYTYPVHQAADIL----FCKGNLVPVGQDQ 193

Query: 203 WGNIICGIDLGERLKTP 219
             ++     +  R    
Sbjct: 194 LPHLELARTIARRFNDR 210


>gi|85713166|ref|ZP_01044198.1| 30S ribosomal protein S4 [Idiomarina baltica OS145]
 gi|85693036|gb|EAQ31002.1| 30S ribosomal protein S4 [Idiomarina baltica OS145]
          Length = 206

 Score = 39.7 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++  EAR+ +   A+ +N  +++     +
Sbjct: 78  EAARIKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAVVVNGQVVNIPSFMV 137

Query: 392 KLQDFDSTGN 401
           + +D  S   
Sbjct: 138 RPEDVVSVRE 147


>gi|222823545|ref|YP_002575119.1| tryptophanyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538767|gb|ACM63868.1| tryptophanyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 319

 Score = 39.7 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 42/345 (12%), Positives = 105/345 (30%), Gaps = 51/345 (14%)

Query: 36  VTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +  +Q+  ++    +    ++              
Sbjct: 1   MRVITGLQPSGD-LHIGNYFGSIKQMLNMQEK-NQMYMFIANYHAM-------------- 44

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI--KYIDLLREIGSFFSVNR 152
                  N EK++   S                +  WL S   + ++L   +  F  +  
Sbjct: 45  ---TSNFNGEKLR-QNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGL 100

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +    S + ++ +  + +   F+Y +L A D +     ++ ++   G DQ  ++    D+
Sbjct: 101 LERAHSYKDKIAKGLNANHGLFSYPVLMAADIL----LFNAQMVPVGKDQIQHVEIARDI 156

Query: 213 GERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             ++        T P         ++    G KM K+    I +                
Sbjct: 157 ALKVNNEWGEIFTLPQAKVNDEVAVVPGTDGAKMSKSYQNTIDIFNTP------------ 204

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
                +      + T   +  D            AK  +       + GR E        
Sbjct: 205 ---KAIKKQISSIVTDSTALEDPKDWQNCNIFKIAKLFLDKTEQEALKGRYEKGGEGYGH 261

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            + +   I +++  +     +++      +  I++ G + +  +A
Sbjct: 262 FKMYLNEIINEYFASAKGEYEKLLANPSKIEEILEFGASKAKKQA 306


>gi|221314557|ref|ZP_03596362.1| pseudouridine synthase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
          Length = 229

 Score = 39.7 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A   +K   +K+N  +++   +++   D      +K+
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKV 55


>gi|320040475|gb|EFW22408.1| 30S ribosomal subunit S4 [Coccidioides posadasii str. Silveira]
          Length = 463

 Score = 39.7 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            I +A FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 136 AIFRAMFASSTRQARQFVVHGAVTVNGKKMQYPGYLLNPGDL 177


>gi|119196147|ref|XP_001248677.1| hypothetical protein CIMG_02448 [Coccidioides immitis RS]
 gi|303321920|ref|XP_003070954.1| S4 domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110651|gb|EER28809.1| S4 domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 463

 Score = 39.7 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            I +A FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 136 AIFRAMFASSTRQARQFVVHGAVTVNGKKMQYPGYLLNPGDL 177


>gi|18976613|ref|NP_577970.1| tryptophanyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|25009432|sp|Q8U453|SYW_PYRFU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|18892180|gb|AAL80365.1| tryptophanyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 385

 Score = 39.7 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 42/319 (13%), Positives = 80/319 (25%), Gaps = 25/319 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           KS+ L I   R F     +  + LD          Y G   +   +H GH+       WL
Sbjct: 43  KSE-LPIFFRRKFFFSHRDYDKVLDDYEQGKGFFLYTGRGPSGP-MHIGHIIPFFATKWL 100

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI-FSSFIKYGTGKTD 122
           Q+        +      I D     + + + +     E+ +          I  G     
Sbjct: 101 QEK-FDVNLYI-----QITD-----DEKFLFKENLTFEDTKYWAYQNILDIIAVGFDPDK 149

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  +          +       + + ++F   ++     +        +  +QA 
Sbjct: 150 TFIFQNSEFT---------KIYEMAIPIAKKINFSMAKAVFGFTEQSKIGMIFFPAIQAA 200

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
                 K       +     W       +     KT  L +   P LT   G        
Sbjct: 201 PTFFEKKRCLIPAAIDQDPYWRLQRDFAESLGYYKTAALHSKFFPPLTGLEGKMSASKPE 260

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            AI+L            +   +         +R       +      L+     + KK++
Sbjct: 261 TAIYLTDNPEEA-GKKIWKFALTGGQPTLKEQREKGGNPEKCVVFKWLEIFFEPDDKKLM 319

Query: 303 ATEITTMVHGREEAEKAAT 321
                         E    
Sbjct: 320 ERYYACKNGELLCGECKRY 338


>gi|288803809|ref|ZP_06409236.1| tryptophan--tRNA ligase [Prevotella melaninogenica D18]
 gi|288333716|gb|EFC72164.1| tryptophan--tRNA ligase [Prevotella melaninogenica D18]
          Length = 362

 Score = 39.7 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 45/323 (13%), Positives = 88/323 (27%), Gaps = 45/323 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVELQNLGDYDKMFVFMADVQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI     +   ++  G       +          +    L  + S   V R  + ++  
Sbjct: 61  QNI---IEVALDYLSAGLSPEKCTLYIQSQIPEIAELTTFLMNLVSVSRVQRNPTVKTEI 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                E ++    F Y + QA D               G DQ   +    +L  R     
Sbjct: 118 KMRNFEANIPMGFFAYPVSQAADIAAFK----ATTVPAGEDQEPMLELTRELVRRFNQIY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------ 262
              L  P +             T    KM K+L   I+L+ +  + +   +         
Sbjct: 174 APVLVEPAIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKTMYTDPTHL 233

Query: 263 ------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA 316
                 +++   V ++    +T      +   + Q  +  +A                 +
Sbjct: 234 NVSDPGHVEGNAVFTYLDAFSTNE-DFAEFWPEFQNLDELKAAYTAGGIGDMKCKKLLNS 292

Query: 317 EKAATAAMECFDMSIHSQHMPTI 339
                          + Q +P I
Sbjct: 293 VLNKMLDPIRARRHEYEQDIPEI 315


>gi|262200160|ref|YP_003271368.1| RNA-binding S4 domain-containing protein [Gordonia bronchialis DSM
           43247]
 gi|262083507|gb|ACY19475.1| RNA-binding S4 domain protein [Gordonia bronchialis DSM 43247]
          Length = 76

 Score = 39.7 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 22/53 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           + L   +  A    S +EA+  +    +++N  + +    Q+ + D    G +
Sbjct: 16  IRLGQFLKLANLIESGSEAKEVIGDGLVRVNGEVETRRGRQLSVGDVVEIGGV 68


>gi|152988322|ref|YP_001350132.1| putative pseudouridylate synthase [Pseudomonas aeruginosa PA7]
 gi|150963480|gb|ABR85505.1| probable pseudouridylate synthase [Pseudomonas aeruginosa PA7]
          Length = 230

 Score = 39.7 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 20/45 (44%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           S  +A+R +    ++++  ++ +   ++++          L  GK
Sbjct: 14  SRRDAQRLIAGGRLRVDGQVVRDGTHEVRVFSRVELDERLLQAGK 58


>gi|210614350|ref|ZP_03290169.1| hypothetical protein CLONEX_02383 [Clostridium nexile DSM 1787]
 gi|210150694|gb|EEA81703.1| hypothetical protein CLONEX_02383 [Clostridium nexile DSM 1787]
          Length = 69

 Score = 39.7 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              + L   +  AG   S  EA+  ++   +K+N  +
Sbjct: 8   EEFIKLGQALKAAGLVESGVEAKEVIQDGLVKVNGEV 44


>gi|328465999|gb|EGF37180.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 331

 Score = 39.7 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   ++    +    + I  P  R + R  
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITVPQDRLKLR-- 56

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                     E+ + + + ++  G     A +          +   +L+       + RM
Sbjct: 57  ----------EQTRSLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSDGKAGVSAGLLTYPPLMAADIL----LYQTDLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|315604117|ref|ZP_07879183.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313823|gb|EFU61874.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 275

 Score = 39.7 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSII------SNEKLQIKLQDFDSTGNIKLSFG 407
           +V+ G A S + A R ++   +K++  ++       +    I + + D      +S G
Sbjct: 10  LVRRGIAPSRSSAARMIEEGRVKLDGQVVLKAARQMDPAQAIVVAESDEADY--VSRG 65


>gi|150395716|ref|YP_001326183.1| hemolysin A [Sinorhizobium medicae WSM419]
 gi|150027231|gb|ABR59348.1| hemolysin A [Sinorhizobium medicae WSM419]
          Length = 251

 Score = 39.7 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 17/45 (37%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + L  L++  G   S   AR  ++   +K++   ++         
Sbjct: 9   IRLDQLLLNRGLVASRARARDAIQRGTVKVDGRTVTKPSSTFAEG 53


>gi|16801365|ref|NP_471633.1| tryptophanyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|20178128|sp|Q929H5|SYW_LISIN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|16414813|emb|CAC97529.1| tryptophanyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 331

 Score = 39.7 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   ++    +    + I  P  R + R  
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITVPQDRLKLR-- 56

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                     E+ + + + ++  G     A +          +   +L+       + RM
Sbjct: 57  ----------EQTRSLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSDGKAGVSAGLLTYPPLMAADIL----LYQTNLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|325973258|ref|YP_004250322.1| 30S ribosomal protein S4 [Mycoplasma suis str. Illinois]
 gi|325989693|ref|YP_004249392.1| 30S ribosomal protein S4 [Mycoplasma suis KI3806]
 gi|323574778|emb|CBZ40438.1| 30S ribosomal protein S4 [Mycoplasma suis]
 gi|323651860|gb|ADX97942.1| 30S ribosomal protein S4 [Mycoplasma suis str. Illinois]
          Length = 202

 Score = 39.7 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 18/48 (37%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L  L+ +AG A +   AR+ +    I++N   +      +       
Sbjct: 96  KLDNLVFRAGMANTRRAARQLIVHGHIRLNGKKVDIPSYVVPPSSVIE 143


>gi|311068833|ref|YP_003973756.1| RluB protein [Bacillus atrophaeus 1942]
 gi|310869350|gb|ADP32825.1| RluB [Bacillus atrophaeus 1942]
          Length = 244

 Score = 39.7 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A   +K   +K+N  II+   +++   D      +K+
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKIITELGVKVTGSDQIEVNGMKI 55


>gi|269965448|ref|ZP_06179567.1| pseudouridine synthase family 1 protein [Vibrio alginolyticus 40B]
 gi|269829927|gb|EEZ84157.1| pseudouridine synthase family 1 protein [Vibrio alginolyticus 40B]
          Length = 385

 Score = 39.7 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             I + GF  S  EA R ++   + IN +        +   D    G
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGNKPEMGTKVLPGDDVCVDG 56


>gi|260901209|ref|ZP_05909604.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308106693|gb|EFO44233.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 80/312 (25%), Gaps = 38/312 (12%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      ++ H    L+     +         +       ++  NI 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQSEHDQTILVADMQGL---------TDNAHNPSKVSSNIL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +       +     +T   + +    L  +          +    N  +  E      +
Sbjct: 70  NVVA-DYLAVGIDPIQTTICLQSQLPALAELTMYYSNLVSIARLERNPTVKNEIQSKGFE 128

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------- 217
           R     F    Y I QA D       +   L   G DQ   +    ++  ++        
Sbjct: 129 RSIPAGF--LTYPISQAADIT----GFRATLVPVGDDQLPMLEQTNEIVRKINDLGGQEI 182

Query: 218 ---TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM-------TSPYNFWQYWRNIDDA 267
                 L +    L +T    KM K++  AI L            S Y    +WR  D  
Sbjct: 183 LKECRPLLSDAPRLPSTDGKHKMSKSMGNAINLGATEKEISVAVKSMYTDPSHWRIEDPG 242

Query: 268 DV---VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            V   + F          E     K   +           ++                A+
Sbjct: 243 QVKGNIVFTYLDAFHSDKEHVEQLKAHYRRGGLG-DGTTKKVLEECLQEMLRPIREKRAL 301

Query: 325 ECFDMSIHSQHM 336
              D +   + +
Sbjct: 302 YLNDKAQLIEIL 313


>gi|241895829|ref|ZP_04783125.1| tryptophanyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
 gi|241870872|gb|EER74623.1| tryptophanyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
          Length = 339

 Score = 39.7 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G + P  ++    +      F D +R      E  +
Sbjct: 13  PTGK-LHIGHYVGSLKNRVDMQNSGQYDPYIMVADKQA------FTDNARNP----EKIQ 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N      +    +     KT   + +    L  +    L     +    N  +  E  + 
Sbjct: 62  NSLLEVVLDYLAVGIDPAKTTIFVQSAVPELSELTEYFLNLVSVARVQRNPTVKAEIQQK 121

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                    F  F Y + QA D   L K     +   G DQ   +    +L  
Sbjct: 122 GFGESIPTGF--FIYPVSQAADI-ALFKGQVVPV---GDDQKPMLEQTRELVR 168


>gi|218884768|ref|YP_002429150.1| tryptophanyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766384|gb|ACL11783.1| tryptophanyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 371

 Score = 39.7 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 45/336 (13%), Positives = 93/336 (27%), Gaps = 39/336 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+ L     V    G+  +    H G       L +LQ  G      +    + I     
Sbjct: 60  LEALKRGEKVAVLTGFMPSGRP-HLGTAMVYEELKFLQSLGAHIKIAIADAEAYI----- 113

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
               RR  RS+ I+  +E +    +       G                +Y  L++    
Sbjct: 114 ---VRREDRSEVIRRGVEFVAHSIA------WGINPDNAEFYYQTAMDNEYYRLIQLFSR 164

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL----AKNYDCRLQMGGSDQ 202
             +   M +             ++  +    + Q+ D + L       Y   +   G+DQ
Sbjct: 165 KITAAEMEA---------IYGDINPGKIMAALTQSADILHLQLDKYGGYKYIVVPVGADQ 215

Query: 203 WGNIICGIDLGERLKT----PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
             ++    D+ +R +      +  ++   LL    G KM K+     +       P    
Sbjct: 216 DPHLRLTRDIADRFEQEFGLKRPSSIYHKLLRGLDGNKMSKS--RPEYAIHLDDDPEMAE 273

Query: 259 QYWRNI----DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV-HGR 313
           +   N                      S  +        +  E K+     +   +  G+
Sbjct: 274 KKLANALTGGRATAEEQRRLGGEPWKCSIFELYVYHLIDDEKELKERYDECVNGKILCGQ 333

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
            +   A        +     + + T  I +  + + 
Sbjct: 334 CKRIAAEKLRKLLIEHQKRFKEVITSGIVEKILKKP 369


>gi|91228934|ref|ZP_01262832.1| pseudouridine synthase family 1 protein [Vibrio alginolyticus
           12G01]
 gi|91187517|gb|EAS73851.1| pseudouridine synthase family 1 protein [Vibrio alginolyticus
           12G01]
          Length = 385

 Score = 39.7 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             I + GF  S  EA R ++   + IN +        +   D    G
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGNKPEMGTKVLPGDDVCVDG 56


>gi|254230555|ref|ZP_04923923.1| conserved hypothetical protein, putative [Vibrio sp. Ex25]
 gi|262394965|ref|YP_003286819.1| ribosomal large subunit pseudouridine synthase F [Vibrio sp. Ex25]
 gi|151936927|gb|EDN55817.1| conserved hypothetical protein, putative [Vibrio sp. Ex25]
 gi|262338559|gb|ACY52354.1| ribosomal large subunit pseudouridine synthase F [Vibrio sp. Ex25]
          Length = 385

 Score = 39.7 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             I + GF  S  EA R ++   + IN +        +   D    G
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGNKPEMGTKVLPGDDVCVDG 56


>gi|331697591|ref|YP_004333830.1| pseudouridine synthase Rsu [Pseudonocardia dioxanivorans CB1190]
 gi|326952280|gb|AEA25977.1| pseudouridine synthase Rsu [Pseudonocardia dioxanivorans CB1190]
          Length = 252

 Score = 39.7 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIK 403
           S G+ L  ++ +AG   S   A   + +  + ++  I+     ++             I 
Sbjct: 6   SDGVRLQKVLAQAG-VASRRAAEELIAAGRVSVDGEIVREMGRRVDPDTAVVHVDGSRIV 64

Query: 404 LS 405
           L 
Sbjct: 65  LR 66


>gi|313622777|gb|EFR93113.1| tryptophan--tRNA ligase [Listeria innocua FSL J1-023]
          Length = 348

 Score = 39.7 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 65/217 (29%), Gaps = 27/217 (12%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGD 83
           ++L+    +     + G   +   L  G+    +  F   Q   ++    +    + I  
Sbjct: 11  KKLEEYKMKK--VIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITV 65

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P  R + R            E+ + + + ++  G     A +          +   +L+ 
Sbjct: 66  PQDRLKLR------------EQTRSLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQC 113

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
                 + RM      + +   +  +S     Y  L A D +     Y   L   G DQ 
Sbjct: 114 NVYIGELERMTQ---FKDKSDGKAGVSAGLLTYPPLMAADIL----LYQTNLVPVGEDQK 166

Query: 204 GNIICGIDLGERLKTPKLFALTSP--LLTTASGTKMG 238
            +I    DL ER         T P   +       M 
Sbjct: 167 QHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMS 203


>gi|296120174|ref|ZP_06838727.1| conserved domain protein [Corynebacterium ammoniagenes DSM 20306]
 gi|295966866|gb|EFG80138.1| conserved domain protein [Corynebacterium ammoniagenes DSM 20306]
          Length = 96

 Score = 39.7 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 15/44 (34%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            I        + L   I  A    +  EA+  +   A+ +N  +
Sbjct: 3   DIEVPITGESIKLGQFIKLASLVATGGEAKTAIAEGAVTVNGEV 46


>gi|194468386|ref|ZP_03074372.1| RNA-binding S4 domain protein [Lactobacillus reuteri 100-23]
 gi|194453239|gb|EDX42137.1| RNA-binding S4 domain protein [Lactobacillus reuteri 100-23]
          Length = 261

 Score = 39.7 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 24/46 (52%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L ++V AGF  S N A++ ++   +++N   I     QI + D  S
Sbjct: 186 LDVVVAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDLIS 231


>gi|56460992|ref|YP_156273.1| 30S ribosomal protein S4 [Idiomarina loihiensis L2TR]
 gi|61215388|sp|Q5QXV7|RS4_IDILO RecName: Full=30S ribosomal protein S4
 gi|56180002|gb|AAV82724.1| Ribosomal protein S4 [Idiomarina loihiensis L2TR]
          Length = 206

 Score = 39.7 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++  EAR+ +   A+ +N  +++    ++
Sbjct: 78  EAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAVVVNGQVVNIPSFKV 137

Query: 392 KLQDFDSTGN 401
           + +D  S   
Sbjct: 138 RPEDVVSVRE 147


>gi|320352938|ref|YP_004194277.1| 30S ribosomal protein S4P [Desulfobulbus propionicus DSM 2032]
 gi|320121440|gb|ADW16986.1| SSU ribosomal protein S4P [Desulfobulbus propionicus DSM 2032]
          Length = 209

 Score = 39.7 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 25/48 (52%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ ++GFA+S ++AR+ ++ N   +N   ++    Q+   D  +   
Sbjct: 103 NVLYRSGFASSRDQARQMVRHNLFTLNGKKVNIPSHQVNAGDIIALKE 150


>gi|111023204|ref|YP_706176.1| tryptophanyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110822734|gb|ABG98018.1| tryptophan--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 344

 Score = 39.7 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 72/243 (29%), Gaps = 35/243 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                 G   TA S H G+      L     LQ         +    +I           
Sbjct: 12  KPRVLSGIQPTADSFHLGNFLG--ALQQWVPLQD-DFDAFYFIPDLHAIT---------- 58

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                +E++   +         +  G     A +          +   +L  I  F   +
Sbjct: 59  VAQDPKELRRRTKIAAAQL---LALGIDPDRATLFVQSQVPEHAQLAWVLNCITGFGEAS 115

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +  ++ S   F Y +L A D + L +     +   G DQ  ++    D
Sbjct: 116 RMTQFKD-KSAKQGSENASVGLFTYPVLMAADIL-LYRPQRVPV---GEDQRQHLELSRD 170

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L +R      K F +    +   +           KM K+      L   +  P    + 
Sbjct: 171 LAQRFNTRFGKAFVIPEAQIIKGTAKIYDLQDPTSKMSKSGPSPAGLINLLDDPKVSAKK 230

Query: 261 WRN 263
            ++
Sbjct: 231 IKS 233


>gi|148260478|ref|YP_001234605.1| RNA-binding S4 domain-containing protein [Acidiphilium cryptum
           JF-5]
 gi|326403671|ref|YP_004283753.1| ribosomal large subunit pseudouridine synthase B [Acidiphilium
           multivorum AIU301]
 gi|146402159|gb|ABQ30686.1| RNA-binding S4 domain protein [Acidiphilium cryptum JF-5]
 gi|325050533|dbj|BAJ80871.1| ribosomal large subunit pseudouridine synthase B [Acidiphilium
           multivorum AIU301]
          Length = 247

 Score = 39.7 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + +   RG  +   + +AG   S  +A R ++S  + +N + + +    +   D  
Sbjct: 3   NPESGERGERIAKYLARAG-VASRRDAERMIESGRVALNGTKVLHPATFVAAGDII 57


>gi|83814349|ref|YP_445783.1| tryptophanyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294507684|ref|YP_003571742.1| Tryptophanyl-tRNA synthetase [Salinibacter ruber M8]
 gi|83755743|gb|ABC43856.1| tryptophanyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294344012|emb|CBH24790.1| Tryptophanyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 344

 Score = 39.7 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 66/238 (27%), Gaps = 38/238 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   +   LH G+      L         H     +    ++    + +D  R  +R   
Sbjct: 23  GIQPSGR-LHLGNYFG--ALRQHIDLHQQHDAYYFIVNYHAM---TTVQDAER--LREHT 74

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
               ++ +   F         ++D   +    W+          E G  +        + 
Sbjct: 75  FNVALDYLALGFDPDEAALFVQSDVPEVTELMWIFFNLLPTSALEKGVAY-------KDK 127

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V + L     L    FNY +LQA D +     Y   L   G+DQ  N+    DL  R   
Sbjct: 128 VEAGLTPNAGL----FNYPVLQAADILA----YGGSLVPVGADQKQNLEIARDLARRFNN 179

Query: 219 -------------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                                 ++    G KM K+    I +  E  +          
Sbjct: 180 RFCPEDEPLLPVPEPQILDDVAVVPGTDGRKMSKSYDNTIGIFDEGDALEEKVMNIVT 237


>gi|92118637|ref|YP_578366.1| pseudouridine synthase, Rsu [Nitrobacter hamburgensis X14]
 gi|91801531|gb|ABE63906.1| Pseudouridine synthase, Rsu [Nitrobacter hamburgensis X14]
          Length = 687

 Score = 39.4 bits (90), Expect = 0.99,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 37/120 (30%), Gaps = 5/120 (4%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
             P    +   +   +   + +     E  + V  +  A     A  E           P
Sbjct: 292 DRPGGSRNAWQERPRRNDRDERPRRDNEDDSRVFAKRPAFGGRGAYRERKPDDDRRGARP 351

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                K     G  +  ++ +AG   S  +A   +    + +N  +I++  L +  +D  
Sbjct: 352 EPRSKKT----GERIAKVMARAG-VASRRDAEEWVTQGRVAVNGRVINSPALDVTSRDVI 406


>gi|309803647|ref|ZP_07697737.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164245|gb|EFO66502.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 339

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNPEKIKNSLI 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 64  QVALDY----LAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIKQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 120 EFNDSLPIGFLN--YPVSQAADITAFK----ASIIPVGDDQEPMLEQTREIVR 166


>gi|258515319|ref|YP_003191541.1| tryptophanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779024|gb|ACV62918.1| tryptophanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 325

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 68/233 (29%), Gaps = 32/233 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +  SLH G+   +M  +   Q+  H+    +    ++                 + 
Sbjct: 6   GIQPSG-SLHLGNYFGMMKRMIDYQEN-HELFCFLVNYHAL-------------TTVFDS 50

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +    +       F+  G     ++           +  +L   + +   +  +    + 
Sbjct: 51  ELLRRQTFEAVCDFLALGLDPEKSVFWVQSD---VPEVTELTWILSNVTGMGLLERCHAF 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           + +  +    +   F Y +L A D +     +       G DQ  ++    D+  R    
Sbjct: 108 KDKTAKGIPANHGLFAYPVLMAADIL----LFGGEKVPVGKDQKQHLEVAKDIALRFNNA 163

Query: 218 TPKLFALTSP-------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             + F +  P       ++    G KM K+    I +  +  +          
Sbjct: 164 YGETFVVPEPDIEEDFAVVPGTDGQKMSKSYGNNIEIFADEKTLKKKIMGIMT 216


>gi|161777477|ref|NP_341988.2| tryptophanyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284173275|ref|ZP_06387244.1| tryptophanyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|20178133|sp|Q97ZX0|SYW_SULSO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
          Length = 380

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 82/311 (26%), Gaps = 36/311 (11%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQK 65
           L ++  R       +    L+          Y G    A SL  H GHL   +   WLQ+
Sbjct: 45  LHVMLRRNVFFSHRDLDLVLNDYEKSKGFFLYTGR---APSLGMHIGHLIPFIFTKWLQE 101

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
                   +      I D    DE         + +            I  G       +
Sbjct: 102 K-FNANLYI-----EITD----DEKYMRNPEFTLDQTRSWAYDNILDIIAVGFNPDKTFI 151

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             +  ++ ++  I +         + + L+F  VR+    + S +     Y  LQ    +
Sbjct: 152 FQDTEYIRNMYPITV--------KIAKKLTFSEVRATFGLDASSNIGLIFYPALQIAPTM 203

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
              K       +     W       +     K  ++ +   P LT   G         AI
Sbjct: 204 FEKKRCLIPAGIDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSSSNPETAI 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAK------------RLTTLPMSEIDRMAKLQGK 293
           +L  +  +       +        +   +            +       E D   K   +
Sbjct: 264 YLVDDPKTVERKIMKYAFSGGQPTIELHRKYGGNPEIDVPFQWLYYFFEEDDNRIKEIEE 323

Query: 294 EINEAKKIIAT 304
           E    K +   
Sbjct: 324 EYRSGKMLTGE 334


>gi|310816564|ref|YP_003964528.1| ribosomal large subunit pseudouridine synthase B
           [Ketogulonicigenium vulgare Y25]
 gi|308755299|gb|ADO43228.1| ribosomal large subunit pseudouridine synthase B
           [Ketogulonicigenium vulgare Y25]
          Length = 649

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  +  ++ +AG A S  +  R +    + +N  +I++  + +  +D
Sbjct: 19  GERIAKVLARAGIA-SRRDVERMILDGRVSVNGKVINSPAVNVADRD 64


>gi|257439124|ref|ZP_05614879.1| leucine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257198375|gb|EEU96659.1| leucine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 848

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 43/363 (11%), Positives = 103/363 (28%), Gaps = 44/363 (12%)

Query: 23  NPRELDILCSQGVVTAYIGYD---LTASSLHAGH-----LTQLMLLFWLQKTGHKPISLM 74
           + +   +         Y   +    + + LH GH        ++     Q  G+  +  M
Sbjct: 18  DEKTFHVEIDHKKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRQN-GYNVLYPM 76

Query: 75  G-GGTSIIGDPSFR-DESRRMMRSQEIQENIEKIKGI-----FSSFIKYGTGKTDALMLN 127
           G     +   P+        +  +   ++N++  +       FS         TD     
Sbjct: 77  GWDAFGL---PTENFAMKNHIHPAIVTKKNVDHFREQLKALGFSFDWDREINTTDPEYYK 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              W+    Y   L       +VN     + V +  +    +     + ++ +      L
Sbjct: 134 WTQWIFLQLYKHGLA-YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHKVKSQWML 192

Query: 188 AKNYDCRLQMGGSD---------QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
                    + G D                G   G  +        T  + TT   T  G
Sbjct: 193 KITAYADKLIDGLDGLDYIERVATQQKNWIGRSHGAEVNFGTTAGDTLTVYTTRCDTLFG 252

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
            T    + ++ E      + +     +   V ++         +E  R +  +  E+N+ 
Sbjct: 253 AT---YMVVSPEHAMVKEWLEKGLLKNADAVTAY--------QAEAARKSDFERSELNKE 301

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKDEVSR--GMGLLT 354
           K  +  E    ++   + +     +        +     +P       E ++  G+ ++ 
Sbjct: 302 KTGVKLEGVMGINPVNDKQIPIFISDYVLSTYGTGAIMAVPAHDTRDWEFAKKFGLPIIE 361

Query: 355 LIV 357
           ++ 
Sbjct: 362 VVK 364


>gi|269955784|ref|YP_003325573.1| tryptophanyl-tRNA synthetase [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304465|gb|ACZ30015.1| tryptophanyl-tRNA synthetase [Xylanimonas cellulosilytica DSM
           15894]
          Length = 357

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 69/204 (33%), Gaps = 32/204 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSI-IG-DPSF-RDESRRMM 94
           G   T  SLH G+      L     LQ+     +  +    S+ +  DP+  R+ +RR  
Sbjct: 27  GMQPTDGSLHLGNYIG--ALRQWVALQE-DFDALYFVADLHSLTVNPDPAALRERTRRTA 83

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                                    ++         WL        L+    F   +RM 
Sbjct: 84  AQYLAAG--------VDPSRSVLFVQSHVPEHAQLGWL--------LQCQTGFGEASRMT 127

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            F+  +S  +  +  +   F Y +L A D +     YD  L   G DQ  ++    DL E
Sbjct: 128 QFKD-KSAKQGSEGTTVGLFAYPMLMAADIL----LYDSALVPVGEDQRQHLELTRDLAE 182

Query: 215 RLKTPKLFALTSPLLTTASGTKMG 238
           R+ T   F   + ++  A   K G
Sbjct: 183 RVNTR--FGDGTVVVPGAHIVKAG 204


>gi|167999805|ref|XP_001752607.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696138|gb|EDQ82478.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 415

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 25/202 (12%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGG 76
           +  +  + L+ +          G   T  S+H G+    +   W  LQ   +  + L+  
Sbjct: 51  NSSTAEKPLENVAVTKKRVV-SGVQPTG-SIHLGNYLGAIK-SWVGLQDL-YDTLFLVVD 106

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             +             +    ++++  +  +   + +I  G   T + +          +
Sbjct: 107 LHA-------------ITMPHDVEQLTKSTRTSAALYIACGIDPTKSSIFVQSHVSAHAE 153

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
              LL  +     +N+M+ F+    +   +         Y +L A D +     Y   L 
Sbjct: 154 LTWLLSCVTPISWLNKMIQFKEKSRKSGEDVGTGL--LTYPLLMASDII----LYQSDLV 207

Query: 197 MGGSDQWGNIICGIDLGERLKT 218
             G DQ  ++    D+ +R+  
Sbjct: 208 PVGEDQRQHLELTRDVADRVNH 229


>gi|94968282|ref|YP_590330.1| SSU ribosomal protein S4P [Candidatus Koribacter versatilis
           Ellin345]
 gi|152060923|sp|Q1IS94|RS4_ACIBL RecName: Full=30S ribosomal protein S4
 gi|94550332|gb|ABF40256.1| SSU ribosomal protein S4P [Candidatus Koribacter versatilis
           Ellin345]
          Length = 209

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 2/129 (1%)

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            K  T     E    A  Q  +  +AK +            +    A       +     
Sbjct: 24  PKCFTDKCAIEKRNFAPGQHGKDRKAKIVGYGLQLREKQKTKRMYFAQENQFRNYFEKAA 83

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                T  +   ++ R +    ++ + GFA++  +AR+ ++   I +N   ++    Q+ 
Sbjct: 84  KGQGVTGEMLLQQLERRLD--NVVYRLGFASARRQARQLVRHGHIAVNGKKVNIPSYQVS 141

Query: 393 LQDFDSTGN 401
           ++D  +   
Sbjct: 142 VKDEIAVRE 150


>gi|296284815|ref|ZP_06862813.1| S4 domain-containing protein [Citromicrobium bathyomarinum JL354]
          Length = 100

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD----STGNIKLSF 406
            + +  F  + + ARR ++S  +++N + +     +I + D      ++G + +  
Sbjct: 6   ALCRLRFVRARSAARRLVESGHLRVNGTRVERVSREITVGDVLTIPRTSGVLVIRI 61


>gi|269986974|gb|EEZ93250.1| tryptophanyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 382

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           LD   +      Y G   +   +H GHL       WLQ+T
Sbjct: 67  LDDYENNRPFYLYTGRGPSGK-MHIGHLLPFTFALWLQRT 105


>gi|52143877|ref|YP_082953.1| pseudouridylate synthase [Bacillus cereus E33L]
 gi|51977346|gb|AAU18896.1| pseudouridylate synthase [Bacillus cereus E33L]
          Length = 242

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVAPQDKVEVNNIPL 55


>gi|13813608|gb|AAK40778.1| Tryptophanyl-tRNA synthetase (trpS) [Sulfolobus solfataricus P2]
 gi|261602061|gb|ACX91664.1| tryptophanyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 386

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 82/311 (26%), Gaps = 36/311 (11%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQK 65
           L ++  R       +    L+          Y G    A SL  H GHL   +   WLQ+
Sbjct: 51  LHVMLRRNVFFSHRDLDLVLNDYEKSKGFFLYTGR---APSLGMHIGHLIPFIFTKWLQE 107

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
                   +      I D    DE         + +            I  G       +
Sbjct: 108 K-FNANLYI-----EITD----DEKYMRNPEFTLDQTRSWAYDNILDIIAVGFNPDKTFI 157

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             +  ++ ++  I +         + + L+F  VR+    + S +     Y  LQ    +
Sbjct: 158 FQDTEYIRNMYPITV--------KIAKKLTFSEVRATFGLDASSNIGLIFYPALQIAPTM 209

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
              K       +     W       +     K  ++ +   P LT   G         AI
Sbjct: 210 FEKKRCLIPAGIDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEGKMSSSNPETAI 269

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAK------------RLTTLPMSEIDRMAKLQGK 293
           +L  +  +       +        +   +            +       E D   K   +
Sbjct: 270 YLVDDPKTVERKIMKYAFSGGQPTIELHRKYGGNPEIDVPFQWLYYFFEEDDNRIKEIEE 329

Query: 294 EINEAKKIIAT 304
           E    K +   
Sbjct: 330 EYRSGKMLTGE 340


>gi|110637412|ref|YP_677619.1| tryptophanyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280093|gb|ABG58279.1| tryptophanyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 322

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 67/213 (31%), Gaps = 37/213 (17%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDES-RRMMRSQEIQENIEKI 106
           H G++   ++    L  T G++ +  +    ++    S +D + R+          +   
Sbjct: 15  HLGNVLGAILPAIELSNTPGNESLFFIADLHTL---TSLKDGALRKQNTYAVAAAWLA-- 69

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                    +G      +           +  +L   +  F     + +  S + +  R 
Sbjct: 70  ---------FGFDTDKHIFYKQSDI---PQVCELTWILNCFTPYPMLANAHSFKDKSNRL 117

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
             ++   F Y +L A D +     Y+  +   G DQ  ++    D+         +  T 
Sbjct: 118 SDVNAGLFVYPVLMAADIL----MYNADIVPVGKDQIQHLEITRDI--ATAFNNQYGETF 171

Query: 227 PL-----------LTTASGTKMGKTLSGAIWLN 248
            L           +    G KM K+ +  I + 
Sbjct: 172 ILPKVKVDENIMTIPGIDGQKMSKSYNNYIDIF 204


>gi|283955139|ref|ZP_06372641.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793352|gb|EFC32119.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           414]
          Length = 314

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/323 (11%), Positives = 95/323 (29%), Gaps = 41/323 (12%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+  ++    +    ++              
Sbjct: 1   MRVLTGLQPSGD-LHIGNYFGAIKQMVDAQEK-NQMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + ++L   +  F  +  + 
Sbjct: 46  SSQDGEKLKQNSLKAAAAFLSLGIDPKKSVFWLQSD---VKEVMELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L A D +     +D ++   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMAADIL----LFDTQIVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           ++        T P         ++    G KM K+    I +       ++  +  +   
Sbjct: 159 KVNNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDI-------FSSEKALKKQI 211

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA--TEITTMVHGREEAEKAATAA 323
            + V                     +       +K +    E     +G  +        
Sbjct: 212 SSIVTDSTALEDPKDHENCSVFKIAKLFLDEVGQKELQMRYEKGGEGYGHFKMYLNDLVN 271

Query: 324 MECFDMSIHSQHMPTISISKDEV 346
               +       +    +   E+
Sbjct: 272 AYFKEAREKYNELLEKPLHLKEI 294


>gi|269215122|ref|ZP_06159051.1| S4 RNA-binding domain protein [Neisseria lactamica ATCC 23970]
 gi|269208236|gb|EEZ74691.1| S4 RNA-binding domain protein [Neisseria lactamica ATCC 23970]
          Length = 121

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE    +H R              +      ++   ++  ++ +  + L  L+  AG A 
Sbjct: 12  TEQAVRIHRRLCGNFGYGGGRCYNNGLFLQGNIMEATVYLED-NEYIALCDLLKLAGLAE 70

Query: 364 STNEARRHLKSNAIKINNS 382
           S  +A+  +    +  N  
Sbjct: 71  SGGQAKAFIAEGLVLRNGE 89


>gi|148642809|ref|YP_001273322.1| 30S ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
 gi|222445040|ref|ZP_03607555.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350391|ref|ZP_05975808.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
 gi|189045354|sp|A5UL76|RS4E_METS3 RecName: Full=30S ribosomal protein S4e
 gi|148551826|gb|ABQ86954.1| ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
 gi|222434605|gb|EEE41770.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861174|gb|EFC93472.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
          Length = 242

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL--TLIVKAGFAT 363
           +  M   +      A                P+      E S  + L+   ++     A 
Sbjct: 1   MAKMGSRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDIL---KLAD 57

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++ EA+R + S  + ++  +I + K  +   D   
Sbjct: 58  NSREAKRIINSGNVLVDGRVIKDYKFPVGFMDIIE 92


>gi|114327123|ref|YP_744280.1| ribosomal large subunit pseudouridine synthase B [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315297|gb|ABI61357.1| ribosomal large subunit pseudouridine synthase B [Granulibacter
           bethesdensis CGDNIH1]
          Length = 251

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            RG  +   + +AG   S  +A + ++   +++NN ++++    +   D  +     +
Sbjct: 14  PRGERIAKWLARAG-VASRRDAEKLVEDGRVRLNNQVVTHPATFVGSGDLVTVNGALV 70


>gi|222480845|ref|YP_002567082.1| Ribosomal protein S4E, central domain protein [Halorubrum
           lacusprofundi ATCC 49239]
 gi|254764559|sp|B9LSR5|RS4E_HALLT RecName: Full=30S ribosomal protein S4e
 gi|222453747|gb|ACM58012.1| Ribosomal protein S4E, central domain protein [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 240

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G+ L+ L+    G+  ST EAR  L ++++ +N   IS+E+  I + D  
Sbjct: 34  EAGVPLVVLLRDVLGYVDSTKEARYALNNDSVLVNGDAISDEQRPIGMFDIL 85


>gi|77413645|ref|ZP_00789830.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77160300|gb|EAO71426.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 341

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 46/178 (25%), Gaps = 19/178 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G +     +    ++       D ++      E   
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQNEGSYTLFVFLADQQAL------TDHAKDPQTIVESIG 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  NVALDY----LAVGLDPNKSTLFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
                    F    Y + QA D           L   G+DQ   I    ++       
Sbjct: 121 GFGESIPAGF--LVYPVAQAADITAFK----ANLVPVGTDQKPMIEQTREIVRSFNHA 172


>gi|22538302|ref|NP_689153.1| tryptophanyl-tRNA synthetase II [Streptococcus agalactiae 2603V/R]
 gi|25012162|ref|NP_736557.1| tryptophanyl-tRNA synthetase II [Streptococcus agalactiae NEM316]
 gi|76787411|ref|YP_330716.1| tryptophanyl-tRNA synthetase II [Streptococcus agalactiae A909]
 gi|76798674|ref|ZP_00780898.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77405630|ref|ZP_00782719.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77407689|ref|ZP_00784444.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77411780|ref|ZP_00788116.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|39932194|sp|Q8DWP7|SYW_STRA5 RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|39932197|sp|Q8E2J5|SYW_STRA3 RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|22535218|gb|AAN01026.1|AE014290_1 tryptophanyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413706|emb|CAD47786.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76562468|gb|ABA45052.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585984|gb|EAO62518.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77162171|gb|EAO73146.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77173688|gb|EAO76802.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77175774|gb|EAO78554.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|319746193|gb|EFV98463.1| tryptophan--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 341

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 46/178 (25%), Gaps = 19/178 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G +     +    ++       D ++      E   
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQNEGSYTLFVFLADQQAL------TDHAKDPQTIVESIG 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  NVALDY----LAVGLDPNKSTLFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
                    F    Y + QA D           L   G+DQ   I    ++       
Sbjct: 121 GFGESIPAGF--LVYPVAQAADITAFK----ANLVPVGTDQKPMIEQTREIVRSFNHA 172


>gi|295131962|ref|YP_003582638.1| tryptophanyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294979977|gb|ADF50442.1| tryptophanyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 322

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 67/215 (31%), Gaps = 35/215 (16%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSI--IGDPSFRDESRRMMRSQEIQENIEK 105
           H G+L   +M    +  +  +     +    S+  I D     E+ R          +  
Sbjct: 15  HLGNLLGAIMPAIKMANSPENDSFIFIADMHSLTQIKD----AETLRNNTYSVAATWLAC 70

Query: 106 IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
              I  +       ++D    +  +W            +  FF   R+    S + +  R
Sbjct: 71  GIDIEKTVF---YRQSDIPQASELSWY-----------LSCFFPYQRLTLAHSFKDKADR 116

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
            + ++   F Y +L A D +     YD  +   G DQ  ++    D+  R          
Sbjct: 117 LEDVNAGLFTYPMLMAADIL----LYDAEIVPVGKDQLQHLEITRDVASRFHAKMGETFV 172

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEM 251
            P          +    G+KM K+    + + +  
Sbjct: 173 IPEAKVEENILYVPGTDGSKMSKSKDNTVNIFQTD 207


>gi|282859008|ref|ZP_06268144.1| tryptophan--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588176|gb|EFB93345.1| tryptophan--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 362

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 69/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYIGSLRRRVELQNLGDYDKMFVFMADVQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI     +   ++  G      ++          +       + +   V R  + ++  
Sbjct: 61  QNI---IEVALDYLSVGLDPEKCVLYIQSMIPELAELTTYFMNLITVSRVQRNPTVKTEI 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                E ++    F Y + QA D           +  G  DQ   I    ++  R     
Sbjct: 118 KMRNFEANIPMGFFAYPVSQAADIAAF---KGTTVPAG-EDQEPMIEVTREIVRRFNQVY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+ +  + +   +    
Sbjct: 174 SPVLVEPTIMLPQNATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWQKVRGMYT 228


>gi|182679330|ref|YP_001833476.1| RNA-binding S4 domain-containing protein [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182635213|gb|ACB95987.1| RNA-binding S4 domain protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 528

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/56 (10%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            + +      +  ++ +AG   S  +A   +    + +N ++++   + +  +D  
Sbjct: 82  EQKDAQEPQRIAKVMARAGLC-SRRDAEAWIAEGRVSVNGTVLTQPGVSVSDEDVI 136


>gi|157165467|ref|YP_001467825.1| putative peptide ABC transporter, permease protein [Campylobacter
           concisus 13826]
 gi|112801794|gb|EAT99138.1| hypothetical RNA pseudouridine synthase jhp_1352 (RNA-uridine
           isomerase) (RNA pseudouridylate synthase) [Campylobacter
           concisus 13826]
          Length = 257

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 5/53 (9%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSFGKKNHIIC 414
           S  EA   +K+  + I   ++S+    +   D    +   IKL   KK   + 
Sbjct: 17  SRREADELIKAGKVSIAGRVVSDLATSVDEDDKVRINGRLIKL---KKEFTVI 66


>gi|116873631|ref|YP_850412.1| tryptophanyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742509|emb|CAK21633.1| tryptophanyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 331

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 59/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q    +    +    + I  P  R + R  
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-FECFYCIVDEHA-ITVPQDRLKLR-- 56

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                     E+ + + + ++  G     A +          +   +L+       + RM
Sbjct: 57  ----------EQTRSLAALYLAVGLNPEKATLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSDGKAGVSAGLLTYPPLMAADIL----LYQTNLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           +R         T P   +       M 
Sbjct: 160 DRFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|255642537|gb|ACU21532.1| unknown [Glycine max]
          Length = 324

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           A+ I+  E+   +       +    +     +       P    S   +   +  +  + 
Sbjct: 198 AQIIVVPELVEFLMSTLVKVRNVPVSCTKIPLISLDYEPPRTK-SFKTIEASLR-VDALA 255

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG-----KKNH 411
            AGF  S ++    + +  ++IN   ++ +   +K  D  S +G  +L  G     KK  
Sbjct: 256 SAGFKVSRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSISGKGRLKIGEINSTKKGK 315

Query: 412 IICHLC 417
               L 
Sbjct: 316 FAVELI 321


>gi|257413346|ref|ZP_04742734.2| ribosomal small subunit pseudouridine synthase A [Roseburia
           intestinalis L1-82]
 gi|257203834|gb|EEV02119.1| ribosomal small subunit pseudouridine synthase A [Roseburia
           intestinalis L1-82]
          Length = 239

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            R M L  L+ + G   S +E +++++S  + +N  ++   + ++  ++
Sbjct: 2   ERAMRLDKLLTELG-TGSRSEVKKYIRSGLVTVNGEVVKKPEQRVDEKN 49


>gi|167648594|ref|YP_001686257.1| RNA-binding S4 domain-containing protein [Caulobacter sp. K31]
 gi|167351024|gb|ABZ73759.1| RNA-binding S4 domain protein [Caulobacter sp. K31]
          Length = 501

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +D+   G  +  ++ +AG   S     R ++   + +N  +++   ++++  D  
Sbjct: 17  QDDDGEGARVAKMLARAG-VASRRAVERLIEDGRVALNGEVLTTPAIKVRPGDIL 70


>gi|86605518|ref|YP_474281.1| S4 domain-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86554060|gb|ABC99018.1| S4 domain protein [Synechococcus sp. JA-3-3Ab]
          Length = 93

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 25/58 (43%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           + L   +   G   +  +A++ +++  +++N  + +    +++L D  +        G
Sbjct: 18  IKLDQFLKLTGVVPTGGQAKQLIQAGQVRVNGEVETRRGRKLRLGDEVAVAGQVWQVG 75


>gi|42518903|ref|NP_964833.1| hypothetical protein LJ0978 [Lactobacillus johnsonii NCC 533]
 gi|41583189|gb|AAS08799.1| hypothetical protein LJ_0978 [Lactobacillus johnsonii NCC 533]
          Length = 265

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 19/136 (13%)

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
            D     Q     E K     EI  +   + +   +     +       S+ M +++IS 
Sbjct: 129 NDENGNWQFFIKAELKDYFLEEIDRIGRTKVK--LSELPLSKVLVQEDDSEEMTSVAISL 186

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----T 399
              +    +  L        S ++ ++ +++  +K+N  +++   + I +QD  S     
Sbjct: 187 RLDAVISAITNL--------SRSQVKKIIEAGEVKLNWHLVTQSNIIISVQDMLSIRHYG 238

Query: 400 GNIKL-----SFGKKN 410
               +       GKK 
Sbjct: 239 RYEIINLATTKKGKKR 254


>gi|312880188|ref|ZP_07739988.1| hemolysin A [Aminomonas paucivorans DSM 12260]
 gi|310783479|gb|EFQ23877.1| hemolysin A [Aminomonas paucivorans DSM 12260]
          Length = 270

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS---TGNIKLSFG 407
            L+ + G ATS  EA+R ++   ++++  +I      +               +S G
Sbjct: 10  QLLAERGLATSRTEAQRWIEEGRVRVDGFVIVKPASLVDPDQGIQVDTPKETWVSRG 66


>gi|308048015|ref|YP_003911581.1| 30S ribosomal protein S4P [Ferrimonas balearica DSM 9799]
 gi|307630205|gb|ADN74507.1| SSU ribosomal protein S4P [Ferrimonas balearica DSM 9799]
          Length = 206

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+           GF  +  EAR+ +   AIK+N  +++     +
Sbjct: 78  EAARLKGNTGENLLQLLESRLDNVVYRMGFGATRAEARQLVSHKAIKVNGRVVNIPSFSV 137

Query: 392 KLQDFDSTGN 401
              D  +   
Sbjct: 138 SPNDVIAVRE 147


>gi|323465755|gb|ADX69442.1| Tryptophanyl-tRNA synthetase II [Lactobacillus helveticus H10]
          Length = 340

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPSKSTIYVQSQIPALFELTSYYMDLVPVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             K    + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 121 DFKDSIPVGFLN--YPVSQAADITAFK----ATIVPVGDDQEPMLEQTREIVR 167


>gi|229164572|ref|ZP_04292466.1| Ribonuclease J 1 [Bacillus cereus R309803]
 gi|228618888|gb|EEK75820.1| Ribonuclease J 1 [Bacillus cereus R309803]
          Length = 555

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 95/267 (35%), Gaps = 11/267 (4%)

Query: 148 FSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           FS++     +SV+      Q  + F  F   + +    VE +  Y+ ++ + G      I
Sbjct: 203 FSMSEKKVGQSVKEIFSEAQGRILFATFASNVHRLQQVVEASILYNRKVVVVGRSMEKTI 262

Query: 207 ICGIDLGERLKTPKLFALTSPL--LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             G DLG       +F     +  +  +    +  T S    +       YN  +  + I
Sbjct: 263 QIGRDLGYIQAPKDIFVGVHEINHIP-SHQVTIICTGSQGEPMAALSRIAYNNHRQIQII 321

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
               VV  +  +    +S    + +L     N     I+   T+    +EE +   +   
Sbjct: 322 PGDTVVLSSSPIPGNVLSVNRTINQLYRVGANVIHHKISDIHTSGHGAQEEQKLMLSLLK 381

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAG--FATSTNEAR---RHLKSNAIK 378
             + M IH ++       +  V  G+ L    V   G     S  EAR   + + S A+ 
Sbjct: 382 PKYFMPIHGEYRMLKKHVELAVECGVPLENCFVMDNGQVLEISKGEARISSKTISSQAVY 441

Query: 379 INNSIISNE-KLQIKLQDFDSTGNIKL 404
           ++ S I +   + ++ +   S   I +
Sbjct: 442 VDGSGIGDIGNIVLRDRRILSEEGIII 468


>gi|148555617|ref|YP_001263199.1| pseudouridine synthase [Sphingomonas wittichii RW1]
 gi|148500807|gb|ABQ69061.1| pseudouridine synthase [Sphingomonas wittichii RW1]
          Length = 286

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
               +  L+ +AG A S  E  R +    + I+ + I      + 
Sbjct: 45  EPQRIAKLLARAGIA-SRREIERMIAEGRVAIDGAAIDTPATLLT 88


>gi|34497146|ref|NP_901361.1| hypothetical protein CV_1691 [Chromobacterium violaceum ATCC 12472]
 gi|34103003|gb|AAQ59366.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 71

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 12/34 (35%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + L  L+       S   A+  +    + +N  +
Sbjct: 12  IALCDLLKACNVCHSGGAAKHFIAEGNVSVNGQV 45


>gi|15791034|ref|NP_280858.1| tryptophanyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236784|ref|YP_001689984.1| tryptophanyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|39932451|sp|Q9HN83|SYW1_HALSA RecName: Full=Tryptophanyl-tRNA synthetase 1; AltName:
           Full=Tryptophan--tRNA ligase 1; Short=TrpRS 1
 gi|10581625|gb|AAG20338.1| tryptophanyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727850|emb|CAP14638.1| tryptophan--tRNA ligase [Halobacterium salinarum R1]
          Length = 513

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           +     A  G+  T    H GH      L W Q+ G    +L+  
Sbjct: 74  NDEPFAALSGFMPTGDP-HIGHKMVFDELIWHQQQGGDAYALIAD 117


>gi|315607439|ref|ZP_07882435.1| ribosomal large subunit pseudouridine synthase B [Prevotella buccae
           ATCC 33574]
 gi|315250871|gb|EFU30864.1| ribosomal large subunit pseudouridine synthase B [Prevotella buccae
           ATCC 33574]
          Length = 492

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 35/93 (37%), Gaps = 1/93 (1%)

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           A    +     +     S    + +  + L   +  AG   S  EA   +++  + +N  
Sbjct: 230 ADYDPNAKYSMKKRIEYSEENIDPNEPIRLNKYLANAGVC-SRREADEFIQAGVVTVNGE 288

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++    ++   D     +  +S  KK +++ +
Sbjct: 289 VVTELGTKVLRTDEVKFHDNPVSLEKKVYVLLN 321


>gi|289522960|ref|ZP_06439814.1| tryptophan--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503503|gb|EFD24667.1| tryptophan--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 329

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 86/271 (31%), Gaps = 34/271 (12%)

Query: 41  GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   LH GHL   +   L  LQ    +    +    ++            M     
Sbjct: 8   GMRPTGK-LHLGHLAGALSNWLK-LQDE-FECYYCIVDWHAL------------MSEYMN 52

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             +  +  + I   ++  G     A++          +    L  I     + R   ++ 
Sbjct: 53  SSKIKDYCREILLDWLAVGLDPEKAVIFQQSHVSGHAELHLALSMIAPLGRLERNPIYKE 112

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--- 215
               +  +   ++    Y +L A D + L K     +   G DQ  ++    +L  +   
Sbjct: 113 QLENIADKDLQTYGFLGYPVLMAADIL-LYKATKVPV---GEDQSIHLEIAKELARKFNS 168

Query: 216 -----LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
                   P++    +P +    G KM K+ + A+++++++   ++  +           
Sbjct: 169 TFKEVFPEPEILLTPTPRVPGIDGRKMSKSYNNALFISEDLNEMWDKVRTMMT-----DP 223

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +  +R       +       +    +E KK 
Sbjct: 224 ARMRRSDPGEPEKCPVWHLHKIFTQDEEKKR 254


>gi|288924576|ref|ZP_06418513.1| ribosomal large subunit pseudouridine synthase B [Prevotella buccae
           D17]
 gi|288338363|gb|EFC76712.1| ribosomal large subunit pseudouridine synthase B [Prevotella buccae
           D17]
          Length = 492

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 35/93 (37%), Gaps = 1/93 (1%)

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           A    +     +     S    + +  + L   +  AG   S  EA   +++  + +N  
Sbjct: 230 ADYDPNAKYSMKKRIEYSEENIDPNEPIRLNKYLANAGVC-SRREADEFIQAGVVTVNGE 288

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++    ++   D     +  +S  KK +++ +
Sbjct: 289 VVTELGTKVLRTDEVKFHDNPVSLEKKVYVLLN 321


>gi|110636569|ref|YP_676776.1| ribosomal large subunit pseudouridine synthase B [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279250|gb|ABG57436.1| pseudouridylate synthase (ribosomal large subunit pseudouridine
           synthase B) [Cytophaga hutchinsonii ATCC 33406]
          Length = 562

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           I  +G   S  EA + +    +K+N  +++    ++K  D     N  L
Sbjct: 335 ISNSGIC-SRREADQLIIEGTVKVNGIVVTELGYKVKPGDSVKYNNKVL 382


>gi|300361463|ref|ZP_07057640.1| S4 domain protein [Lactobacillus gasseri JV-V03]
 gi|300354082|gb|EFJ69953.1| S4 domain protein [Lactobacillus gasseri JV-V03]
          Length = 265

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 19/136 (13%)

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
            D     Q     E K     ++T +   + +  +   + +   +       + TIS+  
Sbjct: 129 NDENGTWQFFVKTELKNYFLEQVTRVGRTKVKLHEFPLSKVLVQEDDSKELSVITISLRL 188

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----T 399
           D V   +             S ++ ++ ++   +K+N  +++   + + +QD  S     
Sbjct: 189 DAVVSAV--------TNL--SRSQVKKMIEDGEVKLNWHLVAQSNIIVSVQDMLSIRHYG 238

Query: 400 GNIKL-----SFGKKN 410
               +       GKK 
Sbjct: 239 RYEIINLTTTKKGKKR 254


>gi|219684830|ref|ZP_03539772.1| tryptophanyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671775|gb|EED28830.1| tryptophanyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 350

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 69/223 (30%), Gaps = 34/223 (15%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEK-YETYFIIADLHTLTTKPDLKS----------IDT 58

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               ++ +   ++  G       +          +  +L        +V R+    S++ 
Sbjct: 59  IPFNVREMVLDYLACGINPNKVSIYLQSAI---PELFELYLIFSMIVTVARLQRIPSIKD 115

Query: 162 RLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
                  + + +    Y +L + D +         L   G D   +I    +L  R    
Sbjct: 116 MSIAAGLKEIPYGLLGYPVLMSADILMAK----ANLVPVGRDNESHIEFARELARRFNHL 171

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                      +F  + PL+      KM K+L  AI+L  +  
Sbjct: 172 YENNFFPIPESVFTDSRPLVGICGKNKMSKSLDNAIFLKDDEN 214


>gi|121702393|ref|XP_001269461.1| 30S ribosomal subunit  S4, putative [Aspergillus clavatus NRRL 1]
 gi|119397604|gb|EAW08035.1| 30S ribosomal subunit S4, putative [Aspergillus clavatus NRRL 1]
          Length = 464

 Score = 39.4 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 35/117 (29%), Gaps = 1/117 (0%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E    ++         + ++  +   +         A   +    +         T  
Sbjct: 54  HGEQVPESQWSRMFTRRIRSVVPMDPVKLATDDGSKMSAGRGSGLETEADASDSKSSTTP 113

Query: 341 ISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            ++   +     L   I +A FA+S  +AR+ +   A+ +N   +      +   D 
Sbjct: 114 FTQMTFAPLERRLDVAIFRAMFASSARQARQFVVHGAVTVNGKKMRYPGYLLNPGDL 170


>gi|307264854|ref|ZP_07546416.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306920112|gb|EFN50324.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 327

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 60/209 (28%), Gaps = 29/209 (13%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMM 94
             + G   +   +H G+      +         ++    +    ++              
Sbjct: 3   KVFSGVQPSGD-IHIGNYLG--AMRQFVALQEDYECFFCVVDLHAL-------------T 46

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRM 153
             Q+  +  E    +   ++  G       +         +     L  +    +    +
Sbjct: 47  VPQDPIKLKENTIELAGLYLAIGLDPKKVTLFIQS----HVAAHAELAWLLQCMTYFGEL 102

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + + K ++++S   F Y  L A D +     Y+      G DQ  ++    D+ 
Sbjct: 103 SRMTQFKEKSKGKETVSVGLFTYPDLMAADIL----LYNTHYVPVGEDQKQHLELTRDIA 158

Query: 214 ERLK--TPKLFALTSPLLTTASGTKMGKT 240
           +R      + F +  P++       M  T
Sbjct: 159 QRFNNRFGETFVVPEPMILKFGARIMSLT 187


>gi|294791518|ref|ZP_06756675.1| cytotoxin/hemolysin [Scardovia inopinata F0304]
 gi|294457989|gb|EFG26343.1| cytotoxin/hemolysin [Scardovia inopinata F0304]
          Length = 276

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 22/49 (44%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           M +   +V  G   S   A+R L++  + +N  + +     ++ +D  S
Sbjct: 1   MRIDKALVSRGLCPSRTRAQRLLEAGLVLLNGHVCTKPSQTVEDKDQIS 49


>gi|256851964|ref|ZP_05557351.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661466|ref|ZP_05862379.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282931729|ref|ZP_06337217.1| tryptophan--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205165|ref|ZP_06922561.1| tryptophan--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256615376|gb|EEU20566.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547921|gb|EEX23898.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281304172|gb|EFA96286.1| tryptophan--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149743|gb|EFH30040.1| tryptophan--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 340

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGR-LHIGHYIGSLKNRVILQNEGKYNPYIMIADTQAM------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     +    N  +  E  + 
Sbjct: 65  EVALDY----LAVGIDPEKSTIFVQSQIPALFELTAYYLDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                    F    Y + QA D           +   G DQ   +    ++  
Sbjct: 121 NFNESIPAGF--LTYPVSQAADITAFK----ATVIPVGDDQEPMMEQTREIVR 167


>gi|224025961|ref|ZP_03644327.1| hypothetical protein BACCOPRO_02712 [Bacteroides coprophilus DSM
           18228]
 gi|224019197|gb|EEF77195.1| hypothetical protein BACCOPRO_02712 [Bacteroides coprophilus DSM
           18228]
          Length = 391

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 68/235 (28%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +       G ++         +  +   ++++
Sbjct: 40  PTGK-LHIGHYVGSLRRRVELQNSGLYDRIFVFEADGQAL---------TDNIENPEKVR 89

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    L  + +  +     S    N  +  E   
Sbjct: 90  QNVIEV-ALDYLAAGLDPTKSTIFIQSQIPELYELSFYFMDLVTVSRLQRNPTVKTEIQM 148

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 149 RNFETSIPVGF--FTYPISQAADIAAFK----ATTVPAGEDQEPMIEQAREIVRRFNYIY 202

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 203 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDPADEVEKKVRSMYT 257


>gi|304394150|ref|ZP_07376073.1| heat shock protein 15 [Ahrensia sp. R2A130]
 gi|303293590|gb|EFL87967.1| heat shock protein 15 [Ahrensia sp. R2A130]
          Length = 132

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/63 (11%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 336 MPTIS-ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           MP    + +  V + +    ++     A+S       ++   +++N   +++    +   
Sbjct: 1   MPDFETLPRLRVDKWLWFCRVVKTRSLASS------LIRGGGVRLNGERVASPSRAVVAD 54

Query: 395 DFD 397
           D  
Sbjct: 55  DVL 57


>gi|303236518|ref|ZP_07323103.1| pseudouridylate synthase [Prevotella disiens FB035-09AN]
 gi|302483266|gb|EFL46276.1| pseudouridylate synthase [Prevotella disiens FB035-09AN]
          Length = 505

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            +A    +     +          + +  + L   +  AG   S  EA   +++  + +N
Sbjct: 241 HSADYDPNAKYSLKKRIEYKEENFDPNEPLRLNKYLANAGVC-SRREADEFIQAGVVTVN 299

Query: 381 NSIISNEKLQIKLQDFD--STGNIKLSFGKKNHIICH 415
             +++    +I   D        + L   KK +++ +
Sbjct: 300 GEVVNELGTKILRSDVITFKGQPVTLE--KKVYVLLN 334


>gi|258511739|ref|YP_003185173.1| hemolysin A [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257478465|gb|ACV58784.1| hemolysin A [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 279

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 16/40 (40%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V  G   S   ARR + +  ++++         ++   
Sbjct: 9   LLVARGLYASREAARRAIMAGLVRVDGVRADKPGFKVAED 48


>gi|311069499|ref|YP_003974422.1| putative 16S pseudouridylate synthase [Bacillus atrophaeus 1942]
 gi|310870016|gb|ADP33491.1| putative 16S pseudouridylate synthase [Bacillus atrophaeus 1942]
          Length = 239

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L  L+  +G   S  E ++ +K+ A+ I+     + K  +   +
Sbjct: 1   MRLDKLLANSGI-GSRKEVKKIVKAGAVSIDGKQAKDVKTHVDPSE 45


>gi|261880058|ref|ZP_06006485.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           bergensis DSM 17361]
 gi|270333299|gb|EFA44085.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           bergensis DSM 17361]
          Length = 253

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                  + +  + L   +  AG   S  EA   +++  + +N  +++    ++   D  
Sbjct: 6   EYKEDHIDPNEPLRLNKFLANAGIC-SRREADEFIQAGVVTVNGEVVTELGTKVLRSDEV 64

Query: 398 STGNIKLSFGKKNHIICH 415
              +  ++  KK +++ +
Sbjct: 65  KFRDQPVTLEKKVYVLLN 82


>gi|50546507|ref|XP_500723.1| YALI0B10494p [Yarrowia lipolytica]
 gi|49646589|emb|CAG82968.1| YALI0B10494p [Yarrowia lipolytica]
          Length = 571

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG--NIKLSFGK 408
           FA S  +A + ++   + +N   I +    +K  D  S     +  + GK
Sbjct: 134 FAASIRQAGQFIRQGNVTVNGVKIKHASYTLKPGDLISVKPEKVLFAAGK 183


>gi|150015684|ref|YP_001307938.1| tryptophanyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149902149|gb|ABR32982.1| tryptophanyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 339

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 61/205 (29%), Gaps = 21/205 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ++G ++   ++    ++       D +R      E   
Sbjct: 12  PTGK-LHIGHYIGSLKNRVVLQESGLYESFIMIADQQAL------TDNARNP----EKIR 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N      +    +     K++  + +    L  +    L     S    N  +  E  + 
Sbjct: 61  NSLTEVALDYLAVGIDPSKSNIFVQSQIPELNELTMHYLNLVTLSRLERNPTVKQEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TP 219
             +      F    Y + QA D               G DQ   I    ++         
Sbjct: 121 NFENSIPAGF--LIYPVSQAADITAFK----ADTVPVGEDQLPMIEQTREIVRSFNSIYG 174

Query: 220 KLFALTSPLLTTASGTKMGKTLSGA 244
           ++      +L +++  ++  T   A
Sbjct: 175 EVLVEPEAVLPSSNAGRLPGTDGKA 199


>gi|282883330|ref|ZP_06291924.1| ribosomal protein S4 [Peptoniphilus lacrimalis 315-B]
 gi|300813858|ref|ZP_07094163.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|281296834|gb|EFA89336.1| ribosomal protein S4 [Peptoniphilus lacrimalis 315-B]
 gi|300512045|gb|EFK39240.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 198

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            L  + GFA+S  +AR+ +    I +N   +     +  + D  S        GKK
Sbjct: 92  NLCYRLGFASSIRQARQMVLHGHILVNGKKVDIPSYRCDVSDEISLS----RKGKK 143


>gi|269792512|ref|YP_003317416.1| hemolysin A [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100147|gb|ACZ19134.1| hemolysin A [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 269

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINN 381
           L+VK G A S +EAR  +++  ++I+ 
Sbjct: 7   LLVKRGLARSRDEARELIETGLVRIDG 33


>gi|256420249|ref|YP_003120902.1| pseudouridine synthase [Chitinophaga pinensis DSM 2588]
 gi|256035157|gb|ACU58701.1| pseudouridine synthase [Chitinophaga pinensis DSM 2588]
          Length = 516

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKL 404
              M L   I  +G   S  +A   +K   + +N  +I+    ++  +D    +   I +
Sbjct: 277 PGEMPLNKYIAHSGLC-SRRKAVDFVKEGKVTVNGELITEPAFKVTAKDEVAINNRKINI 335

Query: 405 SF 406
             
Sbjct: 336 QK 337


>gi|150399382|ref|YP_001323149.1| 30S ribosomal protein S4P [Methanococcus vannielii SB]
 gi|171460838|sp|A6UPW5|RS4_METVS RecName: Full=30S ribosomal protein S4P
 gi|150012085|gb|ABR54537.1| ribosomal protein S4 [Methanococcus vannielii SB]
          Length = 178

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 51/142 (35%), Gaps = 3/142 (2%)

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
           W           + +   +   E+ +M         +A+K+I+   T       +     
Sbjct: 18  WIGERIQKEREISHKYGLVNKKELWKMETQLRNYRRQARKLISDTTTQGGKEAVQLFNVL 77

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
                  +      H+ +++I   E      L TL+ + G A +  +AR+ +    I +N
Sbjct: 78  KRYAILVEQEPTLDHILSLNI---ESILERRLQTLVYRKGLAKTAKQARQLIVHGHIAVN 134

Query: 381 NSIISNEKLQIKLQDFDSTGNI 402
              +++    + + + ++ G +
Sbjct: 135 GRRVTSPSYLVSVSENNAIGYV 156


>gi|114776536|ref|ZP_01451581.1| hypothetical protein SPV1_02412 [Mariprofundus ferrooxydans PV-1]
 gi|114553366|gb|EAU55764.1| hypothetical protein SPV1_02412 [Mariprofundus ferrooxydans PV-1]
          Length = 74

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 23/52 (44%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
              + L  L+     A+S  EA+  +    +K+N  + + ++ +I + D   
Sbjct: 8   EEPIELYKLLKFENLASSGGEAKHVIAEGLVKLNGRLETQKRKKIVVGDIVE 59


>gi|327538476|gb|EGF25140.1| ribosomal large subunit pseudouridine synthase D [Rhodopirellula
           baltica WH47]
          Length = 321

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP  S+S        G + +IV+    TS ++AR  +    + IN S   +    +K  D
Sbjct: 1   MPLTSVSTTVDETNEGRVDIIVRELSETSRSQARGMIDHGCVMINGSPCKSVGTTVKPGD 60

Query: 396 FDSTGN 401
             +   
Sbjct: 61  LVAVRY 66


>gi|317154176|ref|YP_004122224.1| tryptophanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944427|gb|ADU63478.1| tryptophanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 327

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 69/229 (30%), Gaps = 30/229 (13%)

Query: 33  QGVVTAYIGYDLTASSLHAGHL--TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH        L  LQ+  +     +    ++         +
Sbjct: 2   SERQRILSGMRPTGP-LHLGHYFGVIANWLK-LQEE-YDCYFFVADWHAL---------T 49

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                ++ ++  I  +      +I  G      ++          +    L        +
Sbjct: 50  SEYADARRVKGFIPGL---VKDWIAAGLDPDKCVIFQQSMIKEHAELYLYLSMYTPLGWL 106

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R  +F+ + + L ++   +     Y +L A D + + K     +   G DQ  ++    
Sbjct: 107 ERCPTFKEMNAELSQKDLNTHGFLGYPVLMAADIL-MYKPCAVPV---GRDQLPHLELTR 162

Query: 211 DLGERLKT--------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKE 250
           ++  R                LT    L    G KM K+   +I L++ 
Sbjct: 163 EIARRFNHLTGSEALPEPADLLTEEAKLPGLDGRKMSKSYGNSIMLSEP 211


>gi|46198486|ref|YP_004153.1| hemolysin [Thermus thermophilus HB27]
 gi|46196108|gb|AAS80526.1| hemolysin [Thermus thermophilus HB27]
          Length = 235

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G   S  +A+R ++   +++   ++      +   
Sbjct: 7   LVERGLVESREKAKRLIQEGKVRVGGKVVQKPAHPVPEG 45


>gi|309808460|ref|ZP_07702359.1| putative tryptophan--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
 gi|308168288|gb|EFO70407.1| putative tryptophan--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
          Length = 227

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNPEKIKNSLI 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 64  QVALDY----LAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIKQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 120 GFNDSLPIGFLN--YPVSQAADITAFK----ASIIPVGDDQEPMLEQTREIVR 166


>gi|269127043|ref|YP_003300413.1| pseudouridine synthase [Thermomonospora curvata DSM 43183]
 gi|268312001|gb|ACY98375.1| pseudouridine synthase [Thermomonospora curvata DSM 43183]
          Length = 250

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            E   G+ L  ++ +AG   S  +  R +    +K++  ++S
Sbjct: 8   AEHKEGVRLQKVLAEAGL-GSRRQCERLIVEGRVKVDGEVVS 48


>gi|32472413|ref|NP_865407.1| ribosomal large subunit pseudouridine synthase D [Rhodopirellula
           baltica SH 1]
 gi|32443649|emb|CAD73091.1| ribosomal large subunit pseudouridine synthase D [Rhodopirellula
           baltica SH 1]
          Length = 321

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP  S+S        G + +IV+    TS ++AR  +    + IN S   +    +K  D
Sbjct: 1   MPLTSVSTTVDETNEGRVDIIVRELSETSRSQARGMIDHGCVMINGSPCKSVGTTVKPGD 60

Query: 396 FDSTGN 401
             +   
Sbjct: 61  LVAVRY 66


>gi|332295377|ref|YP_004437300.1| ribosomal protein S4 [Thermodesulfobium narugense DSM 14796]
 gi|332178480|gb|AEE14169.1| ribosomal protein S4 [Thermodesulfobium narugense DSM 14796]
          Length = 208

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ ++GFA+S  EAR+ +      +N+  +S     +K  D  S   
Sbjct: 103 NVLYRSGFASSRQEARQMISHGHFNVNSRRVSIPSYSVKPGDVISVRE 150


>gi|289435539|ref|YP_003465411.1| hypothetical protein lse_2178 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171783|emb|CBH28329.1| trpS [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313632287|gb|EFR99339.1| tryptophan--tRNA ligase [Listeria seeligeri FSL N1-067]
 gi|313636791|gb|EFS02434.1| tryptophan--tRNA ligase [Listeria seeligeri FSL S4-171]
          Length = 331

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   ++    +    + I  P  R + R+ 
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITVPQDRLKLRQ- 57

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                      + + + + ++  G     A +          +   +L+       + RM
Sbjct: 58  -----------QTRNLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSDGKAGVSAGLLTYPPLMAADIL----LYQTNLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|262164550|ref|ZP_06032288.1| tryptophanyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262026930|gb|EEY45597.1| tryptophanyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 340

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 65/218 (29%), Gaps = 29/218 (13%)

Query: 45  TASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           T   LH GH    +     LQ   H+   L+     +         +      +++  NI
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQDI-HEQTILVADMQGL---------TDNAHNPKKVSSNI 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +       +     KT   + +    L  +          S    N  +  E      
Sbjct: 69  LNVVA-DYLAVGIDPIKTTICLQSQLPALAELTMYYSNLVTISRLERNPTVKSEIQNKGF 127

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-------- 215
           +R     F    Y I QA D       ++  L   G DQ   +    ++  +        
Sbjct: 128 ERSIPAGF--LTYPISQAADIT----GFNATLVPVGDDQLPMLEQANEIVRKVNLLAGRA 181

Query: 216 --LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              +   L +  S L +T   +KM K++  AI L    
Sbjct: 182 VLNECRPLLSNASRLPSTDGKSKMSKSMGNAINLGASP 219


>gi|257095016|ref|YP_003168657.1| 30S ribosomal protein S4 [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047540|gb|ACV36728.1| ribosomal protein S4 [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 209

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA S +E+R+ ++ N + +N   ++    Q++  D
Sbjct: 109 GFAASRSESRQVVRHNGVLVNGRRVNIPSYQVRPGD 144


>gi|225621236|ref|YP_002722494.1| pseudouridylate synthase [Brachyspira hyodysenteriae WA1]
 gi|225216056|gb|ACN84790.1| pseudouridylate synthase [Brachyspira hyodysenteriae WA1]
          Length = 229

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I     A S  EA R +++  +K+N  I +N   Q+   D   
Sbjct: 7   IASLNLA-SRREADRLIQNGNVKVNGIINTNPATQVDENDKIE 48


>gi|196228479|ref|ZP_03127346.1| ribosomal protein S4 [Chthoniobacter flavus Ellin428]
 gi|196227882|gb|EDY22385.1| ribosomal protein S4 [Chthoniobacter flavus Ellin428]
          Length = 203

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +I + GFA S + AR+ +    +++N   +      +K  D  
Sbjct: 97  NVIYRLGFANSRSAARQLVSHGHVQVNGRKVDVSSFNVKAGDAI 140


>gi|224025133|ref|ZP_03643499.1| hypothetical protein BACCOPRO_01867 [Bacteroides coprophilus DSM
           18228]
 gi|224018369|gb|EEF76367.1| hypothetical protein BACCOPRO_01867 [Bacteroides coprophilus DSM
           18228]
          Length = 253

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + +  + L   +  AG   S  EA   + +  + +N  +++    ++K  D
Sbjct: 13  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKVKRTD 62


>gi|218671119|ref|ZP_03520790.1| hemolysin A [Rhizobium etli GR56]
          Length = 172

 Score = 39.4 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                L  L+V  G   S + AR  ++   ++I   +++
Sbjct: 17  QNSQRLDQLLVSRGLFASRSRARDAVQRGTVRIAGQVVT 55


>gi|313140389|ref|ZP_07802582.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132899|gb|EFR50516.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 264

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           LIV  G   S ++A+R ++   + ++   ++     +   
Sbjct: 19  LIVGLGLVPSRSKAQRLIRDGHVLVDGVAVTKPAANVATA 58


>gi|310287601|ref|YP_003938859.1| FtsJ-like methyltransferase domain [Bifidobacterium bifidum S17]
 gi|311064517|ref|YP_003971242.1| hemolysinIII-like protein [Bifidobacterium bifidum PRL2010]
 gi|309251537|gb|ADO53285.1| conserved hypothetical protein with FtsJ-like methyltransferase
           domain [Bifidobacterium bifidum S17]
 gi|310866836|gb|ADP36205.1| Hemolysin-like protein with S4 and FtsJ-like methyltransferase
           domains [Bifidobacterium bifidum PRL2010]
          Length = 252

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           LIV  G   S ++A+R ++   + ++   ++     +   
Sbjct: 7   LIVGLGLVPSRSKAQRLIRDGHVLVDGVAVTKPAANVATA 46


>gi|291538915|emb|CBL12026.1| ribosomal small subunit pseudouridine synthase A [Roseburia
           intestinalis XB6B4]
          Length = 235

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L  L+ + G   S +E +++++S  + +N  ++   + ++  ++
Sbjct: 1   MRLDKLLTELG-TGSRSEVKKYIRSGLVTVNGEVVKKPEQKVDEKN 45


>gi|291536218|emb|CBL09330.1| ribosomal small subunit pseudouridine synthase A [Roseburia
           intestinalis M50/1]
          Length = 235

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L  L+ + G   S +E +++++S  + +N  ++   + ++  ++
Sbjct: 1   MRLDKLLTELG-TGSRSEVKKYIRSGLVTVNGEVVKKPEQKVDEKN 45


>gi|282860273|ref|ZP_06269343.1| pseudouridylate synthase [Prevotella bivia JCVIHMP010]
 gi|282586947|gb|EFB92182.1| pseudouridylate synthase [Prevotella bivia JCVIHMP010]
          Length = 555

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 1/96 (1%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             +A    +     +          + +  + L   +  AG   S  EA   + +  + +
Sbjct: 290 QRSADYDPNAKYSLKKRIEYKEEHIDPTEPLRLNKFLANAGVC-SRREADDFILAGQVTV 348

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           N  +I+    +I   D     +  +S  KK +++ +
Sbjct: 349 NGEVINELGTKILRTDEVKFQDKLVSLEKKVYVLLN 384


>gi|224283243|ref|ZP_03646565.1| Putative rRNA methylase [Bifidobacterium bifidum NCIMB 41171]
          Length = 252

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           LIV  G   S ++A+R ++   + ++   ++     +   
Sbjct: 7   LIVGLGLVPSRSKAQRLIRDGHVLVDGVAVTKPAANVATA 46


>gi|145294850|ref|YP_001137671.1| tryptophanyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140844770|dbj|BAF53769.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 345

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 81/259 (31%), Gaps = 33/259 (12%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSF 86
             L +Q       G   TA S H G+    +     LQ + +     +    +I  D   
Sbjct: 6   KDLTAQTASRVLSGIQPTADSYHLGNYLGAVKQWIDLQDS-YDAFYFIPDLHAITVD--- 61

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                     +E++             +  G     + +          +   +L  +  
Sbjct: 62  -------QEPEELRNRTISGAAQL---LALGIDPERSTLFVQSHVPAHAELSWVLTCLTG 111

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           F   +RM  F+  +S  +     S   F Y +L A D + L + +   +   G DQ  ++
Sbjct: 112 FGEASRMTQFKD-KSSKRGADRTSAGLFTYPMLMAADIL-LYRPHLVPV---GEDQRQHL 166

Query: 207 ICGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPY 255
                L ER      K F +    +   +           KM K+      +   +  P 
Sbjct: 167 ELTRTLAERFNNRFGKAFEVPEGFIPQGASKIYDLQNPTAKMSKSGDNPKGIINLLDDPK 226

Query: 256 NFWQYWRN--IDDADVVSF 272
              +  ++   D+  V+++
Sbjct: 227 VSTKRIKSAVTDNDGVIAY 245


>gi|19551907|ref|NP_599909.1| tryptophanyl-tRNA synthetase [Corynebacterium glutamicum ATCC
           13032]
 gi|62389566|ref|YP_224968.1| tryptophanyl-tRNA synthetase [Corynebacterium glutamicum ATCC
           13032]
 gi|25009421|sp|Q8NSJ4|SYW_CORGL RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|21323443|dbj|BAB98070.1| Tryptophanyl-tRNA synthetase [Corynebacterium glutamicum ATCC
           13032]
 gi|41324900|emb|CAF19382.1| TRYPTOPHAN TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 345

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 81/259 (31%), Gaps = 33/259 (12%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSF 86
             L +Q       G   TA S H G+    +     LQ + +     +    +I  D   
Sbjct: 6   KDLTAQTASRVLSGIQPTADSYHLGNYLGAVKQWIDLQDS-YDAFYFIPDLHAITVD--- 61

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                     +E++             +  G     + +          +   +L  +  
Sbjct: 62  -------QEPEELRNRTISGAAQL---LALGIDPERSTLFVQSHVPAHAELSWVLTCLTG 111

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           F   +RM  F+  +S  +     S   F Y +L A D + L + +   +   G DQ  ++
Sbjct: 112 FGEASRMTQFKD-KSSKRGADRTSAGLFTYPMLMAADIL-LYRPHLVPV---GEDQRQHL 166

Query: 207 ICGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPY 255
                L ER      K F +    +   +           KM K+      +   +  P 
Sbjct: 167 ELTRTLAERFNNRFGKAFEVPEGFIPQGASKIYDLQNPTAKMSKSGDNPKGIINLLDDPK 226

Query: 256 NFWQYWRN--IDDADVVSF 272
              +  ++   D+  V+++
Sbjct: 227 VSTKRIKSAVTDNDGVIAY 245


>gi|257062155|ref|YP_003140043.1| hemolysin A [Cyanothece sp. PCC 8802]
 gi|256592321|gb|ACV03208.1| hemolysin A [Cyanothece sp. PCC 8802]
          Length = 266

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           L+V+    +S  EA+  +++  +K+N  +I      ++
Sbjct: 9   LLVERNLCSSRQEAQGLIRAGEVKVNQQVIDKPGTPVE 46


>gi|218249068|ref|YP_002374439.1| hemolysin A [Cyanothece sp. PCC 8801]
 gi|218169546|gb|ACK68283.1| hemolysin A [Cyanothece sp. PCC 8801]
          Length = 266

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           L+V+    +S  EA+  +++  +K+N  +I      ++
Sbjct: 9   LLVERNLCSSRQEAQGLIRAGEVKVNQQVIDKPGTPVE 46


>gi|116618935|ref|YP_819306.1| tryptophanyl-tRNA synthetase II [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431379|ref|ZP_03913430.1| tryptophanyl-tRNA synthetase II [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|116097782|gb|ABJ62933.1| tryptophanyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352842|gb|EEJ43017.1| tryptophanyl-tRNA synthetase II [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 339

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 81/272 (29%), Gaps = 37/272 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G + P  ++    +      F D +R   + ++   
Sbjct: 12  PTGK-LHIGHYIGSLKNRVSMQNSGDYLPFVMIADTQA------FTDNARNPEKIRQSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +         ++  G       +          +  +    + S   + R  + +S   
Sbjct: 65  EVALD------YLAVGIDPAKTTIFVQSQIKGLFELTEYFMNLVSVARLQRNPTVKSEIK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-- 219
           +   ++ +      Y + QA D   + +     +   G DQ   +    +L         
Sbjct: 119 QKGFDEGIPAGFLTYPVSQAADI-AIFRATKVPV---GDDQEPMLEQTRELVRSFNNAYK 174

Query: 220 -----KLFALTSP-----LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                +   +  P     L       KM K+L+  I+L+ +  +        + +     
Sbjct: 175 SDVLVEPVGVFPPKGQGRLPGLDGNAKMSKSLNNGIFLSDDADT------LVKKVKSMYT 228

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
                 +T     E + +         + K++
Sbjct: 229 DPLHINITDPGHVEGNVVFTYLDIFDPDKKRV 260


>gi|116623183|ref|YP_825339.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116226345|gb|ABJ85054.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 264

 Score = 39.4 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L  +  KAG A S  +AR+ +    +++N  ++ N    +    
Sbjct: 15  TLERVFSKAG-AGSRTDARKWISGGKVRVNGKVVLNPDHWVDPDH 58


>gi|296114351|ref|ZP_06833005.1| RNA-binding S4 domain protein [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979112|gb|EFG85836.1| RNA-binding S4 domain protein [Gluconacetobacter hansenii ATCC
           23769]
          Length = 258

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
                  G  +   + ++G   S  +A R ++   +++N  I+ +    +   D 
Sbjct: 7   PAPTTPHGDRIAKWLGRSG-VASRRDAERMIEEGRVRLNGDIVRHPATFVSDGDI 60


>gi|260463253|ref|ZP_05811454.1| RNA-binding S4 domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259030843|gb|EEW32118.1| RNA-binding S4 domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 607

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +   + +AG A S  +A   + +  +K+N  ++++    +   D   
Sbjct: 163 IAKRLARAGLA-SRRDAEDLIAAGRVKVNGRVLASPAFNVMPGDIIH 208


>gi|78189781|ref|YP_380119.1| 30S ribosomal protein S4 [Chlorobium chlorochromatii CaD3]
 gi|90101681|sp|Q3APJ9|RS4_CHLCH RecName: Full=30S ribosomal protein S4
 gi|78171980|gb|ABB29076.1| SSU ribosomal protein S4P [Chlorobium chlorochromatii CaD3]
          Length = 203

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  L+ L+         +AGF+ S   AR+ +    + +N   +      +   D
Sbjct: 84  GDNLVKLLERRLDNIVFRAGFSPSRAGARQLVSHGHVTVNGKKVDIPSYLVSPAD 138


>gi|228471718|ref|ZP_04056491.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228276871|gb|EEK15566.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 329

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 50/136 (36%), Gaps = 3/136 (2%)

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
              +    +  +    +  K     E T     +    K  +A       + + ++ P  
Sbjct: 27  TNQKRKTSSGKENFSSDRKKTTTGREKTPYKKEKPSYNKEKSAEYSPTTRAPYKRNTP-- 84

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
             +  + S+G+ L   I  AG      EA R++ +  +++N   ++    +++  D    
Sbjct: 85  KPNATDQSKGIRLNKYIANAGICA-RREADRYIAAGNVEVNGKPMTELGYRVQPTDVVKF 143

Query: 400 GNIKLSFGKKNHIICH 415
               +S  KK +I+ +
Sbjct: 144 DGKNISAEKKEYILLN 159


>gi|227505245|ref|ZP_03935294.1| ribosomal protein S4 [Corynebacterium striatum ATCC 6940]
 gi|227198144|gb|EEI78192.1| ribosomal protein S4 [Corynebacterium striatum ATCC 6940]
          Length = 201

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   I+    Q+   D      
Sbjct: 95  NVVYRAGLANTRRQARQLVSHGHFTVNGKKINVPSFQVSQYDIIDVRE 142


>gi|253998040|ref|YP_003050103.1| 30S ribosomal protein S4 [Methylovorus sp. SIP3-4]
 gi|313200105|ref|YP_004038763.1| 30S ribosomal protein S4 [Methylovorus sp. MP688]
 gi|253984719|gb|ACT49576.1| ribosomal protein S4 [Methylovorus sp. SIP3-4]
 gi|312439421|gb|ADQ83527.1| ribosomal protein S4 [Methylovorus sp. MP688]
          Length = 209

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  LL L+         + G  +S  EAR+ ++ N+I +N   ++    Q++  D
Sbjct: 90  GENLLQLLECRLDNVAYRMGLGSSRTEARQIVRHNSILVNGKRVNIPSYQVRPGD 144


>gi|169830463|ref|YP_001716445.1| RNA-binding S4 domain-containing protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|226732175|sp|B1I1B2|RS4_DESAP RecName: Full=30S ribosomal protein S4
 gi|169637307|gb|ACA58813.1| RNA-binding S4 domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 208

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I + G   S  EAR+ ++    K+N   +     Q+++ D  +   
Sbjct: 102 NVIYRLGLGASRAEARQLVRHGHFKVNGRKVDIPSYQVRVGDVIAVRE 149


>gi|20808633|ref|NP_623804.1| 30S ribosomal protein S4 [Thermoanaerobacter tengcongensis MB4]
 gi|26399396|sp|Q8R7Y1|RS4_THETN RecName: Full=30S ribosomal protein S4
 gi|20517267|gb|AAM25408.1| Ribosomal protein S4 and related proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 206

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+ +         GFA S  +AR+ +    I++N   +      +K  D  S  
Sbjct: 89  GENLLQLLERRLDNVVYRLGFAVSRAQARQLVSHGHIEVNGKKVDIPSYLVKPGDVISVK 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|88861470|ref|ZP_01136096.1| 30S ribosomal protein S4 [Pseudoalteromonas tunicata D2]
 gi|88816518|gb|EAR26347.1| 30S ribosomal protein S4 [Pseudoalteromonas tunicata D2]
          Length = 206

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 14/77 (18%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+ +         GFA++  EAR+ +   ++ +N S+++    +I   D   
Sbjct: 85  NTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKSVMVNGSVVNIPSYRITADD--- 141

Query: 399 TGNIKLS-FGKKNHIIC 414
              + +    KK   I 
Sbjct: 142 --VVVIREKAKKQARIV 156


>gi|315506778|ref|YP_004085665.1| tryptophanyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315413397|gb|ADU11514.1| tryptophanyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 352

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 95/343 (27%), Gaps = 47/343 (13%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH        +   Q+  ++   ++     +         +R      E   
Sbjct: 12  PTGR-LHLGHYVGSIANRVRLHQR--YESFFIIADLHML--------TTRNSRADIEQV- 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVR 160
                + + +  +  G     A                L + + +   + R+ S  E  R
Sbjct: 60  -AHNAREMVTDILAAGVEPERATFYLQSAIPEVGDLNTLFQNLITVPRLERVPSLKEMTR 118

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              K E         Y +LQA D + +       +   G D   ++    ++  R     
Sbjct: 119 DAGKDEMPYGL--LGYPVLQAADILCVKGQ----VVPVGKDNAAHVEVTREIARRFNHLY 172

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                    L + T  L+ T    KM K+   AI L+ +  +                  
Sbjct: 173 GEVFPVPDMLMSETPTLVGTDGAGKMSKSKGNAIALSDDAATVRRKVMG----------- 221

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
                T       D     +G  + E   I   +   +   +          +E  +   
Sbjct: 222 ---MYTDPNRVRADVPGTPEGNPVFEYHDIFNPDRAQVADLKARYRAGRVGDVEVKEALA 278

Query: 332 HSQH--MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            + +  +  I   +       GL+  ++  G   +  E RR L
Sbjct: 279 TALNRFLDPIRERRARFEAQPGLVDELIVTGTERTRAEVRRTL 321


>gi|312876014|ref|ZP_07736003.1| hemolysin A [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797212|gb|EFR13552.1| hemolysin A [Caldicellulosiruptor lactoaceticus 6A]
          Length = 269

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G   S  +A+  + S  + +NN  I      I   
Sbjct: 8   LLVEKGLVESREKAKALILSGNVYVNNQKIEKAGEMIDES 47


>gi|229817935|ref|ZP_04448217.1| hypothetical protein BIFANG_03222 [Bifidobacterium angulatum DSM
           20098]
 gi|229784539|gb|EEP20653.1| hypothetical protein BIFANG_03222 [Bifidobacterium angulatum DSM
           20098]
          Length = 271

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 20/37 (54%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           L+V+AG   +  +A++ +K+  + +N   ++     +
Sbjct: 29  LLVEAGVVGTRTKAQKLIKAGKVTVNGETVTKPAYAV 65


>gi|119897819|ref|YP_933032.1| hypothetical protein azo1528 [Azoarcus sp. BH72]
 gi|119670232|emb|CAL94145.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 74

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           + L  L+  A   +S  EA   +++ A+K++ 
Sbjct: 12  IQLDQLLKAANLVSSGGEAHAAVEAGAVKVDG 43


>gi|312793471|ref|YP_004026394.1| hemolysin a [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180611|gb|ADQ40781.1| hemolysin A [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 269

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G   S  +A+  + S  + +NN  I      I   
Sbjct: 8   LLVEKGLVESREKAKALILSGNVYVNNQKIEKAGEMIDES 47


>gi|224534949|ref|ZP_03675518.1| tryptophan--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513889|gb|EEF84214.1| tryptophan--tRNA ligase [Borrelia spielmanii A14S]
          Length = 348

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 73/223 (32%), Gaps = 34/223 (15%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS-------INTIPF 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+   + +   ++  G       +          + I+L        +V R+    S++ 
Sbjct: 62  NV---REMVLDYLACGINPNKVSIYLQSAI---PELIELYLIFSMIVTVARLQRIPSIKD 115

Query: 162 RLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
                  + + +    Y +L + D +         L   G D   +I    +L  R    
Sbjct: 116 MSIAAGLKEIPYGLLGYPVLMSADILMAK----ANLVPVGRDNESHIEFARELARRFNYL 171

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                      +F  + PL+      KM K+L+ AI+LN +  
Sbjct: 172 YKNNFFPIPESVFTDSRPLVGICGKNKMSKSLNNAIFLNDDEN 214


>gi|157363469|ref|YP_001470236.1| 30S ribosomal protein S4 [Thermotoga lettingae TMO]
 gi|172045985|sp|A8F4T8|RS4_THELT RecName: Full=30S ribosomal protein S4
 gi|157314073|gb|ABV33172.1| RNA-binding S4 domain protein [Thermotoga lettingae TMO]
          Length = 209

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA S  +AR+ +      +N   I     +++  D      
Sbjct: 102 NIVYRLGFAISRRQARQLVTHGHFSVNGVKIDIPSYKLRPGDIVEVRE 149


>gi|119719500|ref|YP_919995.1| tryptophanyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524620|gb|ABL77992.1| tryptophanyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 386

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 74/255 (29%), Gaps = 26/255 (10%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHK 69
           L  R F     +    L+          Y G   + S +H  H+   +   W Q K G  
Sbjct: 53  LLRRNFFFAHRDLNLVLNDYEEGRGFFLYTGRAPSNSPMHIAHIVPFIATRWFQEKFGAN 112

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI-FSSFIKYGTGKTDALMLNN 128
               +              E + + +  E  E IEK       + I  G  +    +  +
Sbjct: 113 VYIQIPD------------EEKFLAKKVETLEEIEKYAVQDILNIIALGFDENKTFIFRD 160

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             ++  +    +L        V R ++F + R+    +   +     Y  LQ    V   
Sbjct: 161 TEYISKLYKPAVL--------VARHINFSTARAVFGFDNESTIGLIFYPALQI---VPTF 209

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
                 L   G DQ        D+  RL   K   + S L+    G +   + S      
Sbjct: 210 FEKKRPLIPCGIDQDPYFRLQRDIAPRLNRYKAAEVLSKLVWGLKGPETKMSASEPDTAI 269

Query: 249 KEMTSPYNFWQYWRN 263
                P    +   N
Sbjct: 270 LLSDPPETVKRKIIN 284


>gi|83952469|ref|ZP_00961200.1| tryptophanyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836142|gb|EAP75440.1| tryptophanyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 339

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 28/209 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              + G   +  +LH G+      L      Q+ G + +  M    +             
Sbjct: 8   PRVFSGIQPSG-NLHLGNYLG--ALKRFAASQERGIESLFCMVDLHA------------- 51

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +   Q+  +     + + + FI  G     +++ N        +   +   I     + R
Sbjct: 52  VTVWQDPADLTRATRELAAGFIASGIDPDRSILFNQSQVPEHTQMAWVFNCIARMGWMQR 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+      K  Q+ S   F Y  L A D + +    +  +   G DQ  ++    D+
Sbjct: 112 MTQFKD--KAGKNAQNASLGLFAYPALMAADIL-VYHATEVPV---GEDQKQHLELTRDI 165

Query: 213 GERLKTP---KLFALTSPLLTTASGTKMG 238
             +         F  T P +  A+   M 
Sbjct: 166 AAKFNHDYGVNFFPETEPRIEGAATRVMS 194


>gi|119718096|ref|YP_925061.1| 30S ribosomal protein S4 [Nocardioides sp. JS614]
 gi|152112238|sp|A1SNI9|RS4_NOCSJ RecName: Full=30S ribosomal protein S4
 gi|119538757|gb|ABL83374.1| SSU ribosomal protein S4P [Nocardioides sp. JS614]
          Length = 202

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 8/71 (11%)

Query: 339 ISISKDEVSRGMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              S+     G  LL L+         +AGFA +   AR+ +     K+N   +     Q
Sbjct: 72  TEASRRAGKTGDNLLQLLECRLDNVVYRAGFARTRRHARQLVTHGHFKVNGKKVDIPSFQ 131

Query: 391 IKLQDFDSTGN 401
           +   D      
Sbjct: 132 VTAHDVIDVRE 142


>gi|253682663|ref|ZP_04863460.1| ribosomal protein S4 [Clostridium botulinum D str. 1873]
 gi|253562375|gb|EES91827.1| ribosomal protein S4 [Clostridium botulinum D str. 1873]
          Length = 206

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 8/57 (14%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           G  LL L+         + GF +S +EAR+ +      +N   +     ++   D  
Sbjct: 89  GENLLKLLEMRLDNVVYRLGFGSSRSEARQLVTHGHFLVNGKKVDIASFKVSAGDVI 145


>gi|254418727|ref|ZP_05032451.1| tryptophanyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184904|gb|EDX79880.1| tryptophanyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 346

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 29/195 (14%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSF 86
               G      G   +  +LH G+      L      Q  G      +    +       
Sbjct: 8   ALYTGPRRILSGIQASG-ALHLGNYLG--ALKRFVELQDQGAPVFVFVADMHA------- 57

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE-IG 145
                 +   QE  +   + + I ++++  G     A++        +++    L     
Sbjct: 58  ------ITVWQEPDKLAAQTREIAAAYLASGLDPAKAIIFPQS----AVRAHAELAWIFN 107

Query: 146 SFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
               +  +      + +  K ++  S   + Y +LQA D + L K  +  +   G DQ  
Sbjct: 108 CVARLGWLDRMTQFKEKSGKHKERASVGLYTYPVLQAADIL-LYKATEVPV---GEDQKQ 163

Query: 205 NIICGIDLGERLKTP 219
           ++    D+  +    
Sbjct: 164 HLELTRDIAAKFNND 178


>gi|156084532|ref|XP_001609749.1| tyrosyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154797001|gb|EDO06181.1| tyrosyl-tRNA synthetase, putative [Babesia bovis]
          Length = 418

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/274 (11%), Positives = 75/274 (27%), Gaps = 33/274 (12%)

Query: 38  AYIGYDLTASSLHAGHLTQLML---LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            Y G++ +   +H      +     +  L++ G   +  +    +++ D    +      
Sbjct: 93  CYDGFEPSGR-MHI--AQGICKAYKVNQLKRMGISSVMWIADWFAMLNDKLNGNME---- 145

Query: 95  RSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIK--YIDLLREIGSFFSVN 151
                  NI  +   F    +  G        L     +      Y  L+ +I   F++ 
Sbjct: 146 -------NIRLVGEYFKHVWRASGMDMNAVKFLWASEEINKNPDLYWRLVMDISRSFNIT 198

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           R+        R   +         Y  +Q  D   +       +   G DQ    +   +
Sbjct: 199 RLKRCSEALGRADGDNRPGA-SLLYPAMQCADIFYI----GADICQLGLDQRKINMLARE 253

Query: 212 LGERLKTPKLFAL----TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW----RN 263
             E         +      P L    G       + AI++           +      + 
Sbjct: 254 YCELKSVGARPIILSHHMMPSLAQQGGKMSKSIPNSAIFMEDSAEEVNAKIKSAWCPEKE 313

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           + D   +++ + +     + +    K +     +
Sbjct: 314 VCDNPCIAYFEHIVFPMFNTVTIPRKEKNGGKRD 347


>gi|310658498|ref|YP_003936219.1| ribosomal small subunit pseudouridine synthase a [Clostridium
           sticklandii DSM 519]
 gi|308825276|emb|CBH21314.1| Ribosomal small subunit pseudouridine synthase A [Clostridium
           sticklandii]
          Length = 243

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             S +E +R++K+  + +N   I++  L I L D       K+S+  +  +  
Sbjct: 19  VGSRSEIKRYIKNKRVMVNGVYITDNGLIINLDDDIIFDEEKISY--RKFVYI 69


>gi|266618748|pdb|3JXE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii
           Tryptophanyl-Trna Synthetase In Complex With Trpamp
 gi|266618749|pdb|3JXE|B Chain B, Crystal Structure Of Pyrococcus Horikoshii
           Tryptophanyl-Trna Synthetase In Complex With Trpamp
          Length = 392

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 64/258 (24%), Gaps = 27/258 (10%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           KS+ L I   R F     +    L           Y G   +   +H GH+       WL
Sbjct: 43  KSE-LPIFFRRKFFFSHRDYDLILKDYEEGRGFFLYTGRGPSGP-MHIGHIIPFFATKWL 100

Query: 64  Q-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           Q K G      +             DE      +    +            I  G     
Sbjct: 101 QEKFGVNLYIQITD-----------DEKFLFKENLTFDDTKRWAYDNILDIIAVGFDPDK 149

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  +          +       + + ++F   ++     +        +  +Q  
Sbjct: 150 TFIFQNSEFT---------KIYEMAIPIAKKINFSMAKAVFGFTEQSKIGMIFFPAIQIA 200

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
                 K       +   DQ        D  E L   K  AL S  + + +      + S
Sbjct: 201 PTFFERKRCLIPAAI---DQDPYWRLQRDFAESLGYYKTAALHSKFVPSLTSLSGKMSAS 257

Query: 243 GAIWLNKEMTSPYNFWQY 260
                     SP +  + 
Sbjct: 258 KPETAIYLTDSPEDVEKK 275


>gi|227431973|ref|ZP_03913993.1| ribosomal protein S4e [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352258|gb|EEJ42464.1| ribosomal protein S4e [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 265

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 42/119 (35%), Gaps = 14/119 (11%)

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL-----TLIV 357
           +     +    +   +     +    +S+    +  +    ++      LL       ++
Sbjct: 135 SRWQIIIDSKMQHYMQQMVTKIGHVQLSLIECDLNNVLPHINDWEENFLLLSSLRLDTVI 194

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AGF  S + A++ ++ N +++N S I     ++ + D        +S   + H    +
Sbjct: 195 SAGFDLSRSGAKKLIEENQVRVNWSEIVKPDAELAIGD-------VISV--RKHGRVQI 244


>gi|225377587|ref|ZP_03754808.1| hypothetical protein ROSEINA2194_03237 [Roseburia inulinivorans DSM
           16841]
 gi|225210563|gb|EEG92917.1| hypothetical protein ROSEINA2194_03237 [Roseburia inulinivorans DSM
           16841]
          Length = 71

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 19/73 (26%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I+++  E    + L   + KAG   S  +A+  ++   +K+N                  
Sbjct: 2   ITVNIRETDEFIKLGQALKKAGLVESGVDAKFFIQDGQVKLNGE---------------- 45

Query: 399 TGNIKLSFGKKNH 411
               +L  GKK +
Sbjct: 46  ---TELQRGKKLY 55


>gi|218280995|ref|ZP_03487585.1| hypothetical protein EUBIFOR_00143 [Eubacterium biforme DSM 3989]
 gi|218217766|gb|EEC91304.1| hypothetical protein EUBIFOR_00143 [Eubacterium biforme DSM 3989]
          Length = 352

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 62/223 (27%), Gaps = 28/223 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +       +++
Sbjct: 11  PTGK-LHIGHYVGSLRNRVLLQNSGEYDEIYIMIADAQAL---------TDNFDNPDKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNET--WLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ENI     +   ++  G   +   +        L  + +  +     S    N  +  E 
Sbjct: 61  ENI---LEVALDYLACGIDPSKTTIFIQSEISQLTELTFYYMNLVSVSRLQRNPTVKAEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGI 210
                     + F    Y I QA D                    Q        N I G 
Sbjct: 118 KMRGFDASIPVGFQ--CYPISQAADITAFKATTVPAGEDQMPMIEQTQEIVHKFNSIYGE 175

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            L E             L  T    KM K+L   I+L+ +  +
Sbjct: 176 TLVEPKILLPQNDACLRLPGTDGKAKMSKSLGNCIYLSDDEET 218


>gi|161349997|ref|NP_143750.2| tryptophanyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|20178122|sp|O59584|SYW_PYRHO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
          Length = 386

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 64/258 (24%), Gaps = 27/258 (10%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           KS+ L I   R F     +    L           Y G   +   +H GH+       WL
Sbjct: 43  KSE-LPIFFRRKFFFSHRDYDLILKDYEEGRGFFLYTGRGPSGP-MHIGHIIPFFATKWL 100

Query: 64  Q-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           Q K G      +             DE      +    +            I  G     
Sbjct: 101 QEKFGVNLYIQITD-----------DEKFLFKENLTFDDTKRWAYDNILDIIAVGFDPDK 149

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  +          +       + + ++F   ++     +        +  +Q  
Sbjct: 150 TFIFQNSEFT---------KIYEMAIPIAKKINFSMAKAVFGFTEQSKIGMIFFPAIQIA 200

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
                 K       +   DQ        D  E L   K  AL S  + + +      + S
Sbjct: 201 PTFFERKRCLIPAAI---DQDPYWRLQRDFAESLGYYKTAALHSKFVPSLTSLSGKMSAS 257

Query: 243 GAIWLNKEMTSPYNFWQY 260
                     SP +  + 
Sbjct: 258 KPETAIYLTDSPEDVEKK 275


>gi|86609348|ref|YP_478110.1| S4 domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557890|gb|ABD02847.1| S4 domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 87

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 20/36 (55%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L   +  AG A +  +A++ +++  +++N  + +
Sbjct: 21  IKLDQFLKLAGVAPTGGQAKQLIQAGQVRVNGEVET 56


>gi|125975412|ref|YP_001039322.1| SSU ribosomal protein S4P [Clostridium thermocellum ATCC 27405]
 gi|256005301|ref|ZP_05430267.1| ribosomal protein S4 [Clostridium thermocellum DSM 2360]
 gi|281419374|ref|ZP_06250389.1| ribosomal protein S4 [Clostridium thermocellum JW20]
 gi|152060944|sp|A3DJK0|RS4_CLOTH RecName: Full=30S ribosomal protein S4
 gi|125715637|gb|ABN54129.1| SSU ribosomal protein S4P [Clostridium thermocellum ATCC 27405]
 gi|255990737|gb|EEU00853.1| ribosomal protein S4 [Clostridium thermocellum DSM 2360]
 gi|281406994|gb|EFB37257.1| ribosomal protein S4 [Clostridium thermocellum JW20]
 gi|316939528|gb|ADU73562.1| ribosomal protein S4 [Clostridium thermocellum DSM 1313]
          Length = 208

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           G A S  EAR+ ++     +N   +      +K+ D  +   
Sbjct: 108 GLAVSRREARQLVRHGHFTVNGKRVDIPSYLVKVGDVIAVKE 149


>gi|307297368|ref|ZP_07577174.1| ribosomal protein S4 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916628|gb|EFN47010.1| ribosomal protein S4 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 208

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 22/48 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA+S  +AR+ +    + +N   ++     +++ D      
Sbjct: 102 NIVFRMGFASSRRQARQLVNHGHVLVNGRRVNKPSFNLRVGDIVEIKE 149


>gi|262173271|ref|ZP_06040948.1| tryptophanyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261890629|gb|EEY36616.1| tryptophanyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 340

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 66/218 (30%), Gaps = 29/218 (13%)

Query: 45  TASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           T   LH GH    +     LQ+  H+   L+     +         +      +++  NI
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQEI-HEQTILVADMQGL---------TDNAHNPKKVSSNI 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +       +     KT   + +    L  +          S    N  +  E      
Sbjct: 69  LNVVA-DYLAVGIDPTKTTICLQSQLPALAELTMYYSNLVTISRLERNPTVKSEIQNKGF 127

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-------- 215
           +R     F    Y I QA D       ++  L   G DQ   +    ++  +        
Sbjct: 128 ERSIPAGF--LTYPISQAADIT----GFNATLVPVGDDQLPMLEQANEIVRKVNSLAGRN 181

Query: 216 --LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              +   L +  S L +T   +KM K++  AI L    
Sbjct: 182 VLNECRPLLSNASRLPSTDGKSKMSKSMGNAINLGASP 219


>gi|171911749|ref|ZP_02927219.1| hemolysin A [Verrucomicrobium spinosum DSM 4136]
          Length = 245

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 17/43 (39%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           L+V  G   S  + +R + +  + +N+  ++     +      
Sbjct: 9   LLVARGLCASREQGKRLILAGDVLVNDVPVTKAGQLVPEDSVI 51


>gi|325269569|ref|ZP_08136185.1| tryptophan--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|325853509|ref|ZP_08171341.1| tryptophan--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|327313154|ref|YP_004328591.1| tryptophan--tRNA ligase [Prevotella denticola F0289]
 gi|324988188|gb|EGC20155.1| tryptophan--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|325484313|gb|EGC87241.1| tryptophan--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|326945139|gb|AEA21024.1| tryptophan--tRNA ligase [Prevotella denticola F0289]
          Length = 362

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 89/323 (27%), Gaps = 45/323 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   K    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVELQNLGDYDKMFVFMADVQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI     +   ++  G      ++          +       + S   V R  + ++  
Sbjct: 61  QNI---IEVALDYLSAGLTPEKCVLYIQSQIPELAELTTYFMNLVSVSRVQRNPTVKTEI 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--T 218
                E ++    F Y + QA D               G DQ   +    ++  R     
Sbjct: 118 KMRNFEANIPMGFFAYPVSQAADIAAFK----ATTVPAGEDQEPMLEVTREIVRRFNQIY 173

Query: 219 PKLFALTSPLLT----------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------ 262
             +    + +L           T    KM K+L   I+L+ +  + +   +         
Sbjct: 174 APVLVEPNIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKTMYTDPAHL 233

Query: 263 ------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA 316
                 +++   V ++    +T      +   + +  +  +A                 +
Sbjct: 234 NVSDPGHVEGNAVFTYLDAFST-DEDFAEFWPEFKNLDELKAAYTAGGIGDMKCKKLLNS 292

Query: 317 EKAATAAMECFDMSIHSQHMPTI 339
                          + Q +P I
Sbjct: 293 VLNKMLDPIRTRRHEYEQDIPEI 315


>gi|262191779|ref|ZP_06049952.1| tryptophanyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262032357|gb|EEY50922.1| tryptophanyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 340

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 65/218 (29%), Gaps = 29/218 (13%)

Query: 45  TASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           T   LH GH    +     LQ+  H+   L+     +         +      +++  NI
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQEI-HEQTILVADMQGL---------TDNAHNPKKVSSNI 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +       +     KT   + +    L  +          S    N  +  E      
Sbjct: 69  LNVVA-DYLAVGIDPTKTTICLQSQLPALAELTMYYSNLVTISRLDRNPTVKSEIQNKGF 127

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-------- 215
           +R     F    Y I QA D       ++  L   G DQ   +    ++  +        
Sbjct: 128 ERSIPAGF--LTYPISQAADIT----GFNATLVPVGDDQLPMLEQANEIVRKVNSLAGRN 181

Query: 216 --LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                  L +  S L +T   +KM K++  AI L    
Sbjct: 182 VLNDCRPLLSNASRLPSTDGKSKMSKSMGNAINLGASP 219


>gi|169841662|ref|ZP_02874775.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 62

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 43/59 (72%)

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
             + +P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+I+A  +T
Sbjct: 2   PSIDTPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSLWEGAKLNEAKEILAMHLT 60


>gi|291543409|emb|CBL16518.1| Uncharacterized conserved protein [Ruminococcus sp. 18P13]
          Length = 73

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + L +L+  AG   +   A+  ++   +K+N  I +    +I+  D    G  +L
Sbjct: 13  IKLDSLLKYAGLTDTGGFAKELIQGGQVKVNGEICTMRGKKIRSGDVVEAGEYRL 67


>gi|203283935|ref|YP_002221675.1| tryptophanyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083378|gb|ACH92969.1| tryptophanyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 350

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 67/221 (30%), Gaps = 28/221 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    ++     +  ++   ++    ++            +    EI  N+
Sbjct: 13  PTG-SLHLGHYVGSIVNRLKYQEEYETYIIIADLHTL-------TTQSDLKSINEISINV 64

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVRSR 162
              + I   ++  G       +         ++   +L  I     + R+    +   + 
Sbjct: 65  ---REIVLDYLSCGIDPERVNIYLQSAIPELLELNLILSMIVMVNRLQRIPSIKDMSINA 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
              E         Y +L + D +             G D   +I    +L  +       
Sbjct: 122 GLSEIPYGL--LGYPVLMSADILMAK----ADFVPVGRDNESHIELTRELARKFNFLYGE 175

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                   +F     L+     TKM K+L  AI+LN +  S
Sbjct: 176 NFFPIPEAIFTDFHTLVGIDGKTKMSKSLGNAIFLNDDEKS 216


>gi|20806545|ref|NP_621716.1| hypothetical protein TTE0003 [Thermoanaerobacter tengcongensis MB4]
 gi|20514982|gb|AAM23320.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 68

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLS 405
           + L   +  A    +  +A+R ++   +K+N  I      ++   D          + 
Sbjct: 11  ITLGQFLKYAKVCDTGGQAKRFIQEGKVKVNGVIELKRGRKLYKNDIIEVEGKTFVIK 68


>gi|19703747|ref|NP_603309.1| tryptophanyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|25009429|sp|Q8RGA3|SYW_FUSNN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|19713881|gb|AAL94608.1| Tryptophanyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 325

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 99/338 (29%), Gaps = 45/338 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    M     LQ + +     +    S+                 + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDS-YDGFYFIADYHSL-------------TSLTKA 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF-ES 158
           +   E    I   ++  G   + + +        ++     L  + S  +   +L    S
Sbjct: 52  ETLKENTYNIVLDYLAVGLDPSKSTIFLQS----NVPEHTELTWLLSNITPVGLLERGHS 107

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +   
Sbjct: 108 YKDKIAKGIPSNTGLLTYPVLMAADIL----IYDSDVVPVGKDQKQHLEMTRDIAMKFNQ 163

Query: 219 P---KLFALTSPLLTTA-------SGTKMGKTLSGAIWLNKEMTSPYNFWQYW------- 261
               + F L  PL+           G KM K+ +  I +                     
Sbjct: 164 QYGVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFATKKKLKEQVMSIVTDSTPL 223

Query: 262 ---RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              +N D+     +A        +E+             AK  +   I        E  +
Sbjct: 224 EEPKNPDNNIAKIYALFNNIDKQNELKDKFLAGNFGYGHAKTELLNSILEYFGTAREKRE 283

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
                M+     ++       +I+ +++ +   ++ L+
Sbjct: 284 ELEKNMDYVKDVLNEGSKKARTIAIEKIKKAKEIVGLV 321


>gi|257413823|ref|ZP_04744341.2| S4 RNA-binding domain protein [Roseburia intestinalis L1-82]
 gi|257202156|gb|EEV00441.1| S4 RNA-binding domain protein [Roseburia intestinalis L1-82]
          Length = 84

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 19/73 (26%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I I   E    + L   + KAG   S  +A+  ++   +K+N                  
Sbjct: 15  IEIQIRETDEFIKLGQALKKAGLVESGVDAKFVIQDGLVKVNGE---------------- 58

Query: 399 TGNIKLSFGKKNH 411
               +L  GKK H
Sbjct: 59  ---TELQRGKKIH 68


>gi|182412027|ref|YP_001817093.1| ribosomal protein S4 [Opitutus terrae PB90-1]
 gi|226699097|sp|B1ZNC4|RS4_OPITP RecName: Full=30S ribosomal protein S4
 gi|177839241|gb|ACB73493.1| ribosomal protein S4 [Opitutus terrae PB90-1]
          Length = 203

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            ++ L+   G A S   AR+ +    I++N   +      +K  D     
Sbjct: 96  SVVYLL---GLAKSRAAARQFVNHGHIRVNGHKVDIASYNVKAGDEIEVK 142


>gi|312137407|ref|YP_004004744.1| tryptophanyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311225126|gb|ADP77982.1| tryptophanyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 366

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 109/349 (31%), Gaps = 30/349 (8%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +  + L  + ++       G   +   +H GH   +  L W +K G + 
Sbjct: 36  LMRRGVIFGQRDYNKILKAMKNKEDFAIVTGMMPSGK-MHIGHKMIIDQLIWYEKKGAEI 94

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    +          +R     +  +  IE      ++++  G   T    +N   
Sbjct: 95  FIPIADMEAY--------STRNKSFEESKKIAIE---EYLANYLALGLDITK-DSINVYL 142

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
              ++   DL   +    + + + +          ++S S  +    I+QA D +    +
Sbjct: 143 QSENLVVEDLAYILSKKVNFSELRA------IYGFDESTSIAQTYIPIIQAADILHPQLD 196

Query: 191 Y----DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT----SPLLTTASGTKMGKTL- 241
                   L   G DQ  +I    DL  R K    F L        ++  +G KM  +  
Sbjct: 197 EFGGPKPVLVPVGPDQDPHIRLSRDLASRFKKEYSFILPSSTYHKFMSGITGGKMSSSKP 256

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           + AI+L        N     +      +    K   +     +  +     ++  + K I
Sbjct: 257 NDAIFLTDPPKVVENKIMQAKTGGRETLEDQRKYGGSPKDCVVYEILIYHVEDDKKVKDI 316

Query: 302 IATEIT-TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
                   ++ G  +   A        D+    + M   +    E S G
Sbjct: 317 YEKCKNGEIICGECKKIVAEHMKKLIIDIGKKREKMVEKAARVLEESNG 365


>gi|294787974|ref|ZP_06753218.1| S4 RNA-binding domain protein [Simonsiella muelleri ATCC 29453]
 gi|294484267|gb|EFG31950.1| S4 RNA-binding domain protein [Simonsiella muelleri ATCC 29453]
          Length = 77

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           E    + L  L+  AG   S  +A+  + S  +  N  +   +  +I+  D     N+ L
Sbjct: 8   EEQEYIALCDLLKLAGLVESGGQAKNAIASGKVLRNGKVEIRKTAKIRGGDVIEFSNVIL 67


>gi|153951987|ref|YP_001398569.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939433|gb|ABS44174.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 319

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/323 (11%), Positives = 93/323 (28%), Gaps = 41/323 (12%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+   +    +    ++              
Sbjct: 1   MRVLTGIQPSGD-LHIGNYFGAIKQMVDAQEKS-QMFIFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + I+L   +  F  +  + 
Sbjct: 46  SSQDGEKLKQNSLKAAAAFLSLGIDAQKSVFWLQSD---VKEVIELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L   D +     +D ++   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMTADIL----LFDTQVVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           ++        T P         ++    G KM K+    I +       ++  +  +   
Sbjct: 159 KVNNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDI-------FSSEKTLKKQI 211

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA--TEITTMVHGREEAEKAATAA 323
            + V               +     +       +K +    E     +G  +        
Sbjct: 212 SSIVTDSTALEDPKDYENCNIFKIAKLFLDEAGQKELQIRYEKGGEGYGHFKMYLNELVN 271

Query: 324 MECFDMSIHSQHMPTISISKDEV 346
               +       +        E+
Sbjct: 272 AYFKEAREKYNELLEKPSHLKEI 294


>gi|15605669|ref|NP_213044.1| 30S ribosomal protein S4 [Aquifex aeolicus VF5]
 gi|6226103|sp|O66484|RS4_AQUAE RecName: Full=30S ribosomal protein S4
 gi|2982819|gb|AAC06442.1| ribosomal protein S04 [Aquifex aeolicus VF5]
          Length = 211

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA++  +AR+ +    + +N   ++     ++  D      
Sbjct: 102 NVVYRLGFASTRRQARQLVAHGHVLVNGKKVNIPSYLVEPGDVIEIKE 149


>gi|86151397|ref|ZP_01069612.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86153784|ref|ZP_01071987.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121613675|ref|YP_001000099.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005057|ref|ZP_02270815.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315123948|ref|YP_004065952.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841744|gb|EAQ58991.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85842745|gb|EAQ59957.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87250172|gb|EAQ73130.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315017670|gb|ADT65763.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 319

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 91/316 (28%), Gaps = 34/316 (10%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+   +    +    ++              
Sbjct: 1   MRVLTGLQPSGD-LHIGNYFGAIKQMVDAQEKS-QMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + ++L   +  F  +  + 
Sbjct: 46  SSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSD---VKEVMELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L A D +     +D ++   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMAADIL----LFDTQIVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-- 263
           ++        T P         ++    G KM K+    I +     +            
Sbjct: 159 KVNNEWGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDS 218

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
               D   F               A  +  +I   K         M            A 
Sbjct: 219 TALEDPKDFKNCNVFKIAKLFLDEAGQKELQIRYEKGGEGYGHFKMYLNELANAYFKEAR 278

Query: 324 MECFDMSIHSQHMPTI 339
            +  ++     H+  I
Sbjct: 279 EKYNELLEKPSHLKEI 294


>gi|315427720|dbj|BAJ49316.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
           subterraneum]
          Length = 238

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 18/47 (38%), Gaps = 6/47 (12%)

Query: 368 ARRHLKSNAIKINNSIISNEKL------QIKLQDFDSTGNIKLSFGK 408
           ARR +K     ++  ++ + +        + + +      + +  GK
Sbjct: 54  ARRLIKQGKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGK 100


>gi|313205697|ref|YP_004044874.1| ribosomal large subunit pseudouridine synthase b [Riemerella
           anatipestifer DSM 15868]
 gi|312445013|gb|ADQ81368.1| ribosomal large subunit pseudouridine synthase B [Riemerella
           anatipestifer DSM 15868]
 gi|325336858|gb|ADZ13132.1| 16S rRNA uridine-516 pseudouridylate synthase related
           pseudouridylate synthase [Riemerella anatipestifer
           RA-GD]
          Length = 311

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  +G   S  EA   ++   ++IN  +++    Q++  D
Sbjct: 85  IANSGIC-SRREADELIQQGLVEINGKVVTELGYQVQKTD 123


>gi|315425862|dbj|BAJ47515.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
           subterraneum]
          Length = 238

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 6/47 (12%)

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDS------TGNIKLSFGK 408
           ARR +K     ++  ++ + +  + L D  S         + +  GK
Sbjct: 54  ARRLIKQGKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGK 100


>gi|315022583|gb|EFT35609.1| Ribosomal large subunit pseudouridine synthase B [Riemerella
           anatipestifer RA-YM]
          Length = 311

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  +G   S  EA   ++   ++IN  +++    Q++  D
Sbjct: 85  IANSGIC-SRREADELIQQGLVEINGKVVTELGYQVQKTD 123


>gi|50843284|ref|YP_056511.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202]
 gi|282855171|ref|ZP_06264503.1| ribosomal protein S4 [Propionibacterium acnes J139]
 gi|289424812|ref|ZP_06426594.1| ribosomal protein S4 [Propionibacterium acnes SK187]
 gi|289427659|ref|ZP_06429371.1| ribosomal protein S4 [Propionibacterium acnes J165]
 gi|295131353|ref|YP_003582016.1| ribosomal protein S4 [Propionibacterium acnes SK137]
 gi|61215507|sp|Q6A6R0|RS4_PROAC RecName: Full=30S ribosomal protein S4
 gi|50840886|gb|AAT83553.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202]
 gi|282581759|gb|EFB87144.1| ribosomal protein S4 [Propionibacterium acnes J139]
 gi|289154775|gb|EFD03458.1| ribosomal protein S4 [Propionibacterium acnes SK187]
 gi|289159150|gb|EFD07342.1| ribosomal protein S4 [Propionibacterium acnes J165]
 gi|291375309|gb|ADD99163.1| ribosomal protein S4 [Propionibacterium acnes SK137]
 gi|313763204|gb|EFS34568.1| ribosomal protein S4 [Propionibacterium acnes HL013PA1]
 gi|313773119|gb|EFS39085.1| ribosomal protein S4 [Propionibacterium acnes HL074PA1]
 gi|313793291|gb|EFS41349.1| ribosomal protein S4 [Propionibacterium acnes HL110PA1]
 gi|313801065|gb|EFS42333.1| ribosomal protein S4 [Propionibacterium acnes HL110PA2]
 gi|313808806|gb|EFS47260.1| ribosomal protein S4 [Propionibacterium acnes HL087PA2]
 gi|313810400|gb|EFS48114.1| ribosomal protein S4 [Propionibacterium acnes HL083PA1]
 gi|313812264|gb|EFS49978.1| ribosomal protein S4 [Propionibacterium acnes HL025PA1]
 gi|313816541|gb|EFS54255.1| ribosomal protein S4 [Propionibacterium acnes HL059PA1]
 gi|313817985|gb|EFS55699.1| ribosomal protein S4 [Propionibacterium acnes HL046PA2]
 gi|313819898|gb|EFS57612.1| ribosomal protein S4 [Propionibacterium acnes HL036PA1]
 gi|313823389|gb|EFS61103.1| ribosomal protein S4 [Propionibacterium acnes HL036PA2]
 gi|313824860|gb|EFS62574.1| ribosomal protein S4 [Propionibacterium acnes HL063PA1]
 gi|313828398|gb|EFS66112.1| ribosomal protein S4 [Propionibacterium acnes HL063PA2]
 gi|313830102|gb|EFS67816.1| ribosomal protein S4 [Propionibacterium acnes HL007PA1]
 gi|313832626|gb|EFS70340.1| ribosomal protein S4 [Propionibacterium acnes HL056PA1]
 gi|313837982|gb|EFS75696.1| ribosomal protein S4 [Propionibacterium acnes HL086PA1]
 gi|314914365|gb|EFS78196.1| ribosomal protein S4 [Propionibacterium acnes HL005PA4]
 gi|314917685|gb|EFS81516.1| ribosomal protein S4 [Propionibacterium acnes HL050PA1]
 gi|314919583|gb|EFS83414.1| ribosomal protein S4 [Propionibacterium acnes HL050PA3]
 gi|314925755|gb|EFS89586.1| ribosomal protein S4 [Propionibacterium acnes HL036PA3]
 gi|314930173|gb|EFS94004.1| ribosomal protein S4 [Propionibacterium acnes HL067PA1]
 gi|314957154|gb|EFT01258.1| ribosomal protein S4 [Propionibacterium acnes HL027PA1]
 gi|314957795|gb|EFT01898.1| ribosomal protein S4 [Propionibacterium acnes HL002PA1]
 gi|314960835|gb|EFT04936.1| ribosomal protein S4 [Propionibacterium acnes HL002PA2]
 gi|314963509|gb|EFT07609.1| ribosomal protein S4 [Propionibacterium acnes HL082PA1]
 gi|314964877|gb|EFT08976.1| ribosomal protein S4 [Propionibacterium acnes HL082PA2]
 gi|314969908|gb|EFT14006.1| ribosomal protein S4 [Propionibacterium acnes HL037PA1]
 gi|314973049|gb|EFT17145.1| ribosomal protein S4 [Propionibacterium acnes HL053PA1]
 gi|314975545|gb|EFT19640.1| ribosomal protein S4 [Propionibacterium acnes HL045PA1]
 gi|314979766|gb|EFT23860.1| ribosomal protein S4 [Propionibacterium acnes HL072PA2]
 gi|314984828|gb|EFT28920.1| ribosomal protein S4 [Propionibacterium acnes HL005PA1]
 gi|314986087|gb|EFT30179.1| ribosomal protein S4 [Propionibacterium acnes HL005PA2]
 gi|314988702|gb|EFT32793.1| ribosomal protein S4 [Propionibacterium acnes HL005PA3]
 gi|315077130|gb|EFT49197.1| ribosomal protein S4 [Propionibacterium acnes HL053PA2]
 gi|315079817|gb|EFT51793.1| ribosomal protein S4 [Propionibacterium acnes HL078PA1]
 gi|315083184|gb|EFT55160.1| ribosomal protein S4 [Propionibacterium acnes HL027PA2]
 gi|315086862|gb|EFT58838.1| ribosomal protein S4 [Propionibacterium acnes HL002PA3]
 gi|315089954|gb|EFT61930.1| ribosomal protein S4 [Propionibacterium acnes HL072PA1]
 gi|315090476|gb|EFT62452.1| ribosomal protein S4 [Propionibacterium acnes HL110PA4]
 gi|315093709|gb|EFT65685.1| ribosomal protein S4 [Propionibacterium acnes HL060PA1]
 gi|315096724|gb|EFT68700.1| ribosomal protein S4 [Propionibacterium acnes HL038PA1]
 gi|315097952|gb|EFT69928.1| ribosomal protein S4 [Propionibacterium acnes HL059PA2]
 gi|315100595|gb|EFT72571.1| ribosomal protein S4 [Propionibacterium acnes HL046PA1]
 gi|315104001|gb|EFT75977.1| ribosomal protein S4 [Propionibacterium acnes HL050PA2]
 gi|315106038|gb|EFT78014.1| ribosomal protein S4 [Propionibacterium acnes HL030PA1]
 gi|315109198|gb|EFT81174.1| ribosomal protein S4 [Propionibacterium acnes HL030PA2]
 gi|327325233|gb|EGE67038.1| ribosomal protein S4 [Propionibacterium acnes HL096PA2]
 gi|327325529|gb|EGE67328.1| ribosomal protein S4 [Propionibacterium acnes HL103PA1]
 gi|327332742|gb|EGE74476.1| ribosomal protein S4 [Propionibacterium acnes HL097PA1]
 gi|327451455|gb|EGE98109.1| ribosomal protein S4 [Propionibacterium acnes HL087PA3]
 gi|327451570|gb|EGE98224.1| ribosomal protein S4 [Propionibacterium acnes HL092PA1]
 gi|327451857|gb|EGE98511.1| ribosomal protein S4 [Propionibacterium acnes HL083PA2]
 gi|328752071|gb|EGF65687.1| ribosomal protein S4 [Propionibacterium acnes HL087PA1]
 gi|328755531|gb|EGF69147.1| ribosomal protein S4 [Propionibacterium acnes HL025PA2]
 gi|328756316|gb|EGF69932.1| ribosomal protein S4 [Propionibacterium acnes HL020PA1]
 gi|328761350|gb|EGF74877.1| ribosomal protein S4 [Propionibacterium acnes HL099PA1]
 gi|332676223|gb|AEE73039.1| 30S ribosomal protein S4 [Propionibacterium acnes 266]
          Length = 201

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|34764269|ref|ZP_00145114.1| Tryptophanyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|237740857|ref|ZP_04571338.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|256846796|ref|ZP_05552251.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|27885957|gb|EAA23288.1| Tryptophanyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|229431154|gb|EEO41366.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|256717762|gb|EEU31320.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 325

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 96/338 (28%), Gaps = 45/338 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    M     LQ   +     +    S+                 + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDN-YDGFYFIADYHSL-------------TSLTKA 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF-ES 158
           +   E    I   ++  G     + +        ++     L  + S  +   +L    S
Sbjct: 52  EILKENTYNIVLDYLAVGLDPNKSTIFLQS----NVPEHTELTWLLSNITPVGLLERGHS 107

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +   
Sbjct: 108 YKDKIAKGIPSNTGLLTYPVLMAADIL----IYDTDVVPVGKDQKQHLEMTRDIAMKFNQ 163

Query: 219 P---KLFALTSPLLTTA-------SGTKMGKTLSGAIWLNKEMTSPYNFWQYW------- 261
               + F L  P +           G KM K+ +  I +                     
Sbjct: 164 QYEVEFFKLPEPFILDDSAIVPGTDGQKMSKSYNNTINMFATKKKLKEQVMSIVTDSTPL 223

Query: 262 ---RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              +N D+     +A        +E+             AK  +   I        E  +
Sbjct: 224 EEPKNPDNNISKIYALFNNIDKQNELKDKFLAGNFGYGHAKTELLNSILEYFGKAREKRE 283

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
                ++     ++       +I+ +++ +   ++ LI
Sbjct: 284 ELEKDIDYVKDVLNEGSKKARAIAIEKIKKAKEIVGLI 321


>gi|312127717|ref|YP_003992591.1| pseudouridine synthase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777736|gb|ADQ07222.1| pseudouridine synthase [Caldicellulosiruptor hydrothermalis 108]
          Length = 233

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKLSF 406
           M L   +   GF  S ++ ++ ++   + +N   I     +I  ++         +K S 
Sbjct: 1   MRLDKFLTHCGF-GSRSQVKKLIRGGIVTVNGKRIVEVDFKINPEEDVVEVDGRIVKFSR 59


>gi|299144488|ref|ZP_07037567.1| tryptophan--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517576|gb|EFI41316.1| tryptophan--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 329

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 85/309 (27%), Gaps = 33/309 (10%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               Y     +  SL  G+    L     LQ+  +  I  +    + I  P    + R+ 
Sbjct: 3   KKIVYSAIQPSG-SLTIGNYIGALSNFGNLQEE-YDCIYCIADMHA-ITMPQEPKDLRKN 59

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                                     ++         W            + +  S+ ++
Sbjct: 60  TLDVISLYLAAG----LDPEKSILYIQSHVPQHTELGW-----------VLNTISSLGQL 104

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + + ++ + +     NY +L A D + L +     +   G DQ  +I    DL 
Sbjct: 105 QRMTQFKDKSQKSKEILAGILNYPVLMAADIL-LYQTSYVPV---GEDQRQHIELTRDLA 160

Query: 214 ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           ++  +      T P + T        +L        +  S  N +    + +D       
Sbjct: 161 QKFNSRYSDTFTIPEMMTPKVGARIMSLQNPESKMSKSDSDVNSYILILDSEDDTRRKIK 220

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           + +T                + N+ +  +   I        ++        +  +  I  
Sbjct: 221 RAVTDSVGE----------IKYNDEQPGLKNLINIYSSFSGKSTDEIVEYYKNSNYGIFK 270

Query: 334 QHMPTISIS 342
           + +  + + 
Sbjct: 271 EDLAEVVVE 279


>gi|226303561|ref|YP_002763519.1| hypothetical protein RER_00720 [Rhodococcus erythropolis PR4]
 gi|226182676|dbj|BAH30780.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 115

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 5/68 (7%)

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
                     M   + ++P + I        + L   +  A    S  EA+  +    + 
Sbjct: 28  CRVQFCGRRKMIDMTDNIPAVPIR----DEMIRLGQFLKLANLIESGAEAKEVIADGMVS 83

Query: 379 INNSIISN 386
           +N   + +
Sbjct: 84  VNGE-VED 90


>gi|217074322|gb|ACJ85521.1| unknown [Medicago truncatula]
          Length = 325

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI-KLSFG---- 407
           +  +  AGF  S ++    + +  ++IN   I+ +   +K  D  S   + +L  G    
Sbjct: 252 VDAVASAGFKISRSKLVDMISNGDVRINWIPITTKGTTVKSGDLVSVSGLGRLKIGEVNT 311

Query: 408 -KKNHIICHLC 417
            KK      L 
Sbjct: 312 TKKGKFAVELI 322


>gi|149184427|ref|ZP_01862745.1| hypothetical protein ED21_26953 [Erythrobacter sp. SD-21]
 gi|148831747|gb|EDL50180.1| hypothetical protein ED21_26953 [Erythrobacter sp. SD-21]
          Length = 255

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
             G  +  L+ +AG   S  E  R +    + ++  ++    ++++
Sbjct: 8   EAGDRIAKLLARAG-VASRREIERMIADGRVSLDGKVLDTPAVKLE 52


>gi|327449339|gb|EGE95993.1| ribosomal protein S4 [Propionibacterium acnes HL013PA2]
          Length = 201

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|327325138|gb|EGE66944.1| ribosomal protein S4 [Propionibacterium acnes HL096PA3]
          Length = 201

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|227535269|ref|ZP_03965318.1| ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187153|gb|EEI67220.1| ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 239

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A+S  +AR+ +    I ++   +     +++     +   
Sbjct: 133 NLVFRLGLASSRPQARQLVNHGHITVDGKRVDIPSYEVEPGQVIALRE 180


>gi|203287478|ref|YP_002222493.1| tryptophanyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201084698|gb|ACH94272.1| tryptophanyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 350

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 67/221 (30%), Gaps = 28/221 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    ++     +  ++   ++    ++            +    EI  N+
Sbjct: 13  PTG-SLHLGHYVGSIVNRLKYQEEYETYIIIADLHTL-------TTQSDLKSISEISINV 64

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVRSR 162
              + I   ++  G       +         ++   +L  I     + R+    +   + 
Sbjct: 65  ---REIVLDYLSCGIDPERVNIYLQSAIPELLELNLILSMIVMVNRLQRIPSIKDMSINA 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
              E         Y +L + D +             G D   +I    +L  +       
Sbjct: 122 GLSEIPYGL--LGYPVLMSADILMAK----ADFVPVGRDNESHIELTRELARKFNFLYGE 175

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                   +F     L+     TKM K+L  AI+LN +  S
Sbjct: 176 NFFPIPEAIFTDFHTLVGIDGKTKMSKSLGNAIFLNDDERS 216


>gi|85858172|ref|YP_460374.1| 30S ribosomal protein S4P [Syntrophus aciditrophicus SB]
 gi|123515693|sp|Q2LQD0|RS4_SYNAS RecName: Full=30S ribosomal protein S4
 gi|85721263|gb|ABC76206.1| SSU ribosomal protein S4P [Syntrophus aciditrophicus SB]
          Length = 209

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            GFA S NEAR+ ++ N   +N   ++     + + DF          G+KN+ I  
Sbjct: 108 LGFANSRNEARQLVRHNHFLVNGRKVNIPSFLVNIGDFIEVTEE----GRKNNKIIE 160


>gi|300857808|ref|YP_003782791.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis FRC41]
 gi|300685262|gb|ADK28184.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis FRC41]
 gi|302205543|gb|ADL09885.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis C231]
 gi|302330098|gb|ADL20292.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis 1002]
 gi|308275779|gb|ADO25678.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis I19]
          Length = 201

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  L+ L+          AG A +  +AR+ +      +N   I+    ++   D   
Sbjct: 80  KTGDNLVILLEARLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKINVPSYKVSQYDIID 139

Query: 399 TGN 401
              
Sbjct: 140 VRE 142


>gi|195970192|ref|NP_384985.2| hypothetical protein SMc00973 [Sinorhizobium meliloti 1021]
 gi|307304209|ref|ZP_07583961.1| hemolysin A [Sinorhizobium meliloti BL225C]
 gi|307320514|ref|ZP_07599929.1| hemolysin A [Sinorhizobium meliloti AK83]
 gi|187904153|emb|CAC45451.2| Probable hemolysin [Sinorhizobium meliloti 1021]
 gi|306893790|gb|EFN24561.1| hemolysin A [Sinorhizobium meliloti AK83]
 gi|306902677|gb|EFN33270.1| hemolysin A [Sinorhizobium meliloti BL225C]
          Length = 251

 Score = 39.0 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           + L  L++  G   S   AR  ++   +K++   ++  
Sbjct: 9   IRLDQLLLNRGLVASRARARDAIQRGTVKVDGRTVTKP 46


>gi|325912266|ref|ZP_08174663.1| tryptophan--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325912496|ref|ZP_08174886.1| tryptophan--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325475925|gb|EGC79094.1| tryptophan--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325478169|gb|EGC81291.1| tryptophan--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 339

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNPEKIKNSLI 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 64  QVALDY----LAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIKQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 120 GFNDSLPIGFLN--YPVSQAADITAFK----ASIIPVGDDQEPMLEQTREIVR 166


>gi|315185732|gb|EFU19499.1| tryptophanyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 358

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 65/231 (28%), Gaps = 29/231 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ   ++   ++     +   P  +D              
Sbjct: 12  PTGK-LHLGHYVGSLANRVKLQD-DYECFFIIADLHMLTTKPEKKDVE----------AI 59

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVRS 161
            E  + +   ++  G     +++          +       + +   + R+    E  ++
Sbjct: 60  AENAREMVLDYLACGIDPEKSVIYLQSAVPEVYELNLFFEMLVTVPRLQRIPTLKEMAQA 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
               E  L      Y +LQA D +         +   G D   ++    ++  R      
Sbjct: 120 AHLEEMPLGL--LGYPVLQAADIL----LPRAHVVPVGKDNVPHVELTREIARRFNFLYG 173

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                   L      L+      KM K+L  AI L+ +  +          
Sbjct: 174 EVFPVPDPLVGEVPTLVGIDGAAKMSKSLGNAILLSDDPKTVEKKVFKMYT 224


>gi|303327556|ref|ZP_07357997.1| tryptophan--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862496|gb|EFL85429.1| tryptophan--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 377

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 24/199 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++         +      ++++
Sbjct: 24  PTGR-LHIGHYVGSLKRRVELQNSGEFDEIYIMIADAQAL---------TDNADNPEKVR 73

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +NI     +   ++  G     +++        LC + +  +     S    N  +  E 
Sbjct: 74  QNI---IEVALDYLACGLDPEKSVLFIQSQVPELCEMAFYYMDLVTVSRLQRNPTVKSEI 130

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                +    + F  F Y I QA D               G DQ   I    ++  +   
Sbjct: 131 QLRNFETSLPVGF--FTYPISQAADITAFK----ATTVPVGEDQAPMIEQTKEIVHKFNA 184

Query: 219 PKLFALTSPLLTTASGTKM 237
                L  P +        
Sbjct: 185 VYGETLVEPTILLPDNEAC 203


>gi|300775302|ref|ZP_07085164.1| tryptophan--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506042|gb|EFK37178.1| tryptophan--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 322

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 88/321 (27%), Gaps = 37/321 (11%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWL-QKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRS 96
           G   T +  H G+L   ++    L ++ G++    +    ++  I D     ++ R    
Sbjct: 7   GIQATGTP-HLGNLLGAIIPAIELSKQEGNESFLFIANLHTLTQIKD----AQTLRQNTY 61

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +     +             G                  +  +L   +  FF   R+   
Sbjct: 62  EIAAAWLAC-----------GLDTEKTYFYRQSDI---AETCELSWHLSCFFPYQRLTLA 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
            S + +  R Q ++   F Y IL A D +     YD  +   G DQ  ++    D+  R 
Sbjct: 108 HSFKDKADRLQDVNAGLFTYPILMAADIL----LYDAEIVPVGKDQLQHLEFARDVASRF 163

Query: 217 KTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
                  L  P          +    G KM K+    I +                 D  
Sbjct: 164 NNQMGEILVLPQSELQEDTKYVPGTDGQKMSKSRGNIINIFLPEKELKKQVMSIE-TDSK 222

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
            +       T    +    +A  +  E   AK +                       E  
Sbjct: 223 ALEDPKDPETDKVFAIYQLIATPEQTEELRAKYLAGNFGYGHAKKELLDLILVRFEKERE 282

Query: 328 DMSIHSQHMPTISISKDEVSR 348
             + +  ++  +     + + 
Sbjct: 283 TFNYYMNNLDELEAKLQQGAE 303


>gi|254304303|ref|ZP_04971661.1| tryptophan--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324495|gb|EDK89745.1| tryptophan--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 325

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 96/338 (28%), Gaps = 45/338 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    M     LQ + +     +    S+                 + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDS-YDGFYFIADYHSL-------------TSLTKA 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF-ES 158
           +   +    I   ++  G     + +        ++     +  + S  +   +L    S
Sbjct: 52  ETLRQDTYNIVLDYLAVGLDPNKSTIYLQS----NVPEHTEMTWLLSNITPVGLLERGHS 107

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +   
Sbjct: 108 YKDKIAKGIPANTGLLTYPVLMAADIL----IYDTDVVPVGKDQKQHLEMTRDIAMKFNQ 163

Query: 219 P---KLFALTSPLLTTA-------SGTKMGKTLSGAIWLNKEMTSPYNFWQYW------- 261
                 F L  P +           G KM K+ +  I +                     
Sbjct: 164 QYEVDFFKLPEPFILDDSAIVPGTDGQKMSKSYNNTINMFVTKKKLKEQVMSIVTDSTPL 223

Query: 262 ---RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              +N D+     +A        +E+             AK  +   I        E  +
Sbjct: 224 EEPKNPDNNIAKIYALFNNIDKQNELKDKFLAGNFGYGHAKTELLNSILDYFGKAREKRE 283

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
                M+     ++       +I+ +++ +   ++ LI
Sbjct: 284 ELEKDMDYVKDVLNEGSKKARAIAIEKIKKAKEIVGLI 321


>gi|116494737|ref|YP_806471.1| ribosomal protein S4 [Lactobacillus casei ATCC 334]
 gi|191638248|ref|YP_001987414.1| 30S ribosomal protein S4 [Lactobacillus casei BL23]
 gi|239631669|ref|ZP_04674700.1| 30S ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066295|ref|YP_003788318.1| 30S ribosomal protein L4 [Lactobacillus casei str. Zhang]
 gi|122263845|sp|Q039U3|RS4_LACC3 RecName: Full=30S ribosomal protein S4
 gi|226699078|sp|B3WDV5|RS4_LACCB RecName: Full=30S ribosomal protein S4
 gi|116104887|gb|ABJ70029.1| SSU ribosomal protein S4P [Lactobacillus casei ATCC 334]
 gi|190712550|emb|CAQ66556.1| 30S ribosomal protein S4 [Lactobacillus casei BL23]
 gi|239526134|gb|EEQ65135.1| 30S ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438702|gb|ADK18468.1| Ribosomal protein S4 [Lactobacillus casei str. Zhang]
 gi|327382278|gb|AEA53754.1| 30S ribosomal protein S4 [Lactobacillus casei LC2W]
 gi|327385474|gb|AEA56948.1| 30S ribosomal protein S4 [Lactobacillus casei BD-II]
          Length = 203

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A+S  +AR+ +    I ++   +     +++     +   
Sbjct: 97  NLVFRLGLASSRPQARQLVNHGHITVDGKRVDIPSYEVEPGQVIALRE 144


>gi|326334734|ref|ZP_08200941.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           sp. oral taxon 338 str. F0234]
 gi|325693184|gb|EGD35116.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           sp. oral taxon 338 str. F0234]
          Length = 294

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +  + S+G+ L   I  AG      EA R++ +  +++N   ++    +++  D      
Sbjct: 52  NTTDDSKGIRLNKYIANAGICA-RREADRYITAGNVEVNGKPMTELGYRVQPNDIVKFDG 110

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +I+ +
Sbjct: 111 KNISAEKKEYILLN 124


>gi|297180260|gb|ADI16479.1| hypothetical protein [uncultured bacterium HF4000_05M23]
          Length = 208

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 342 SKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           S+ E   G  LL L+           GFA S  +AR+ +    I++N   ++    Q+  
Sbjct: 80  SRLEGVTGDRLLQLLESRLDNVVYRLGFADSRPQARQIVGHGHIRVNGKKVNIPSYQVSP 139

Query: 394 QDFDS 398
            D  S
Sbjct: 140 GDRIS 144


>gi|299141529|ref|ZP_07034665.1| tryptophan--tRNA ligase [Prevotella oris C735]
 gi|298576865|gb|EFI48735.1| tryptophan--tRNA ligase [Prevotella oris C735]
          Length = 361

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 62/235 (26%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++  +    ++ R+ M    + 
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGDYDRMFVFMADVQALTDNADNPEKIRQNMIEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +     +                   L  +    +     S    N  +  E   
Sbjct: 70  YLSAGLDPQLCTLYIQSQIPE----------LAELTTYLMNLVSVSRVQRNPTVKTEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y + QA D               G DQ   I    +L  R     
Sbjct: 120 RNFEANIPMGF--FCYPVSQAADIAAFK----ATTIPAGEDQEPMIELTRELVRRFNQVY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+ +  + +   +    
Sbjct: 174 SEVLVEPNIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWTKVKSMYT 228


>gi|187478027|ref|YP_786051.1| hypothetical protein BAV1525 [Bordetella avium 197N]
 gi|115422613|emb|CAJ49138.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 77

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP I     + S  + +  L+  +G   S    +  +    +++ N + + +  +I+   
Sbjct: 1   MPLIEFELAQGSPHIEINQLLKASGVCDSGGAGKALVAQGLVRVGNEVETRKTAKIRGGQ 60

Query: 396 FDSTGN--IKLS 405
             S G+  I + 
Sbjct: 61  IVSYGDTRIVVR 72


>gi|307941691|ref|ZP_07657046.1| ribosomal large subunit pseudouridine synthase B [Roseibium sp.
           TrichSKD4]
 gi|307775299|gb|EFO34505.1| ribosomal large subunit pseudouridine synthase B [Roseibium sp.
           TrichSKD4]
          Length = 380

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            G  +  ++ +AG   S  EA   + +  +++N   +    + +  +D
Sbjct: 14  EGERIAKVMARAGLC-SRREAETWIAAGRVEVNGKKLDTPAITVGAKD 60


>gi|308051543|ref|YP_003915117.1| putative RNA-binding protein [Legionella longbeachae NSW150]
 gi|288859968|emb|CBJ13953.1| putative RNA-binding protein [Legionella longbeachae NSW150]
          Length = 72

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN--SIISNEKLQIKLQDFDSTGNIKL 404
              + L  ++   G  +S  EA+  + + ++ +N        +++             +L
Sbjct: 8   KEPVELFKILKFEGITSSGAEAKEMIAAGSVLVNGIIEKQKRKRMVAGDTIELKGEVFRL 67

Query: 405 SFG 407
             G
Sbjct: 68  KLG 70


>gi|269302593|gb|ACZ32693.1| tryptophanyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 344

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 81/305 (26%), Gaps = 39/305 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH    +     LQ +  +    ++    ++      R E 
Sbjct: 2   NKKKRVLTGDRPTGK-LHLGHWVGSIKNRLELQNSPEYDCFFIIADLHTLT--TKIRKEE 58

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
              + +   +   + +             ++    +     L S+        I     +
Sbjct: 59  VLDVDNHIYEVLADWLSVGIDPTKSIIYLQSAIPEIYELHLLFSM-------LISINRVM 111

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
                 +  R+    E  LS+    Y ILQ+ D +        +    G D   ++    
Sbjct: 112 GIPSLKDMARNASIEEGGLSYGLIGYPILQSADIL----LAKAQFVPVGKDNEAHVELTR 167

Query: 211 DL---------GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW-------LNKEMTSP 254
           D+             +   L    + L+      KM K+ + AI+       + +++   
Sbjct: 168 DIARNFNRLYGQVFPEPEVLQGELTSLVGIDGQGKMSKSANNAIYLSDSDATITEKVRKM 227

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-------EAKKIIATEIT 307
           Y      R      V      +     +      +              E K  +A E+ 
Sbjct: 228 YTDPNRIRATTPGRVEGNPLFIYHDIFNPHKDEVEEFKARYRQGCIKDIEVKARLAEELI 287

Query: 308 TMVHG 312
             +  
Sbjct: 288 HFLKP 292


>gi|225386351|ref|ZP_03756115.1| hypothetical protein CLOSTASPAR_00095 [Clostridium asparagiforme
           DSM 15981]
 gi|225047533|gb|EEG57779.1| hypothetical protein CLOSTASPAR_00095 [Clostridium asparagiforme
           DSM 15981]
          Length = 69

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 23/62 (37%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   +  AG   S  EA+  ++   +K+N  + +    ++   D  +     +  
Sbjct: 8   DEYIKLGQALKAAGLVESGVEAKYAVEDGNVKVNGEVATQRGKKLVDGDVVAYKGETIKI 67

Query: 407 GK 408
            K
Sbjct: 68  VK 69


>gi|126723621|ref|NP_001075757.1| tryptophanyl-tRNA synthetase, cytoplasmic [Oryctolagus cuniculus]
 gi|165011|gb|AAA31246.1| eucaryotic release factor (eRF) [Oryctolagus cuniculus]
          Length = 475

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 69/235 (29%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G        + GHL   +   WLQ     P+ +             
Sbjct: 151 LDAYENKKPFYLYTGRGPLLKQCNVGHLIPFIFTKWLQDVFDVPLVV-----------QM 199

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIG 145
            D+ + + +   +++            +  G       + ++  ++  S  +   + +I 
Sbjct: 200 SDDEKYLWKDLTLEQVYGYTLENAKDIMPCGFDVNKTFIFSDLDYMGMSPGFYKNVVKIQ 259

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY--------DFVELAKNYDCRLQM 197
              + N+      V+       S    + ++  +QA                +  C +  
Sbjct: 260 KHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFHGQADIQCLIPC 313

Query: 198 GGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
              DQ        D+  R+  PK     +   P L  A         + +I+L  
Sbjct: 314 -AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 367


>gi|329667551|gb|AEB93499.1| cell division protein [Lactobacillus johnsonii DPC 6026]
          Length = 265

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 9/56 (16%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----TGNIKL-----SFGKKN 410
           S ++ ++ +++  +K+N  +++   + I +QD  S         +       GKK 
Sbjct: 199 SRSQVKKIIEAGEVKLNWHLVTQSNIIISVQDMLSIRHYGRYEIINLATTKKGKKR 254


>gi|166032888|ref|ZP_02235717.1| hypothetical protein DORFOR_02609 [Dorea formicigenerans ATCC
           27755]
 gi|166027245|gb|EDR46002.1| hypothetical protein DORFOR_02609 [Dorea formicigenerans ATCC
           27755]
          Length = 69

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + L   +  AG   S  EA+  ++   + +N  I
Sbjct: 11  IKLGQALKAAGLVESGVEAKEVIQDGQVSVNGEI 44


>gi|119496387|ref|XP_001264967.1| 30S ribosomal subunit S4, putative [Neosartorya fischeri NRRL 181]
 gi|119413129|gb|EAW23070.1| 30S ribosomal subunit S4, putative [Neosartorya fischeri NRRL 181]
          Length = 469

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            I +A FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 134 AIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDL 175


>gi|70991196|ref|XP_750447.1| 30S ribosomal subunit  S4 [Aspergillus fumigatus Af293]
 gi|66848079|gb|EAL88409.1| 30S ribosomal subunit  S4, putative [Aspergillus fumigatus Af293]
 gi|159130921|gb|EDP56034.1| 30S ribosomal subunit S4, putative [Aspergillus fumigatus A1163]
          Length = 469

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            I +A FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 134 AIFRAMFASSTRQARQFVVHGAVTVNGKKMRYPGYLLNPGDL 175


>gi|307107979|gb|EFN56220.1| hypothetical protein CHLNCDRAFT_30844 [Chlorella variabilis]
          Length = 341

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 22/195 (11%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           R    +     EL  L  +   + AY G++ +   +H   G L  L +   L K G    
Sbjct: 47  RSVGEECIQEAELRRLLEKKPHIVAYDGFEPSGR-MHIAQGVLKALNVNK-LTKCGVTFK 104

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D           +  +E  K +       G        L+    
Sbjct: 105 FWVADWFAQMNNKMGGDLK---KIQVVGRYLVEIWKAV-------GMNMERVEFLSCSEE 154

Query: 132 LCSIK--YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +      Y  L+ +I    ++ R+L    +  R + +  LS  +  Y I+QA D   L  
Sbjct: 155 INKRPDEYWSLVMDIARRNNLKRVLRCTQIMGRSENDD-LSAAQIFYPIMQAADIFFLK- 212

Query: 190 NYDCRLQMGGSDQWG 204
                +   G DQ  
Sbjct: 213 ---ADICQLGMDQRK 224


>gi|260591212|ref|ZP_05856670.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           veroralis F0319]
 gi|260537077|gb|EEX19694.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           veroralis F0319]
          Length = 253

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                  + +  + L   +  AG   S  EA   + S A+ +N  ++     ++   D  
Sbjct: 6   EYKEENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTVNGEVVKELGSKVLRTDVV 64

Query: 398 STGNIKLSFGKKNHIICH 415
              +  +S  KK +++ +
Sbjct: 65  LFQDKPVSLEKKVYVLLN 82


>gi|158320966|ref|YP_001513473.1| 30S ribosomal protein S4 [Alkaliphilus oremlandii OhILAs]
 gi|172048008|sp|A8MI45|RS4B_ALKOO RecName: Full=30S ribosomal protein S4 B
 gi|158141165|gb|ABW19477.1| RNA-binding S4 domain protein [Alkaliphilus oremlandii OhILAs]
          Length = 197

 Score = 39.0 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA+S  EAR+ +    I +N   +      I++ D
Sbjct: 98  GFASSIREARQMVNHGHILVNGKKVDRPSYPIQVDD 133


>gi|269114915|ref|YP_003302678.1| ribosomal large subunit pseudouridine synthase D [Mycoplasma
           hominis]
 gi|268322540|emb|CAX37275.1| Ribosomal large subunit pseudouridine synthaseD (RNA
           pseudouridylate synthase, RNA-uridine isomerase )
           [Mycoplasma hominis ATCC 23114]
          Length = 297

 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 18/32 (56%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S N+ +  +++ A+ +N+  I+  K  +K  D
Sbjct: 23  SRNDIKELIENGAVFVNSIKINKPKFVVKEGD 54


>gi|262282736|ref|ZP_06060504.1| S4 domain-containing protein [Streptococcus sp. 2_1_36FAA]
 gi|262262027|gb|EEY80725.1| S4 domain-containing protein [Streptococcus sp. 2_1_36FAA]
          Length = 264

 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 7/141 (4%)

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             T +    +DR          +  +++  +  T       ++ A T             
Sbjct: 111 FGTLMNRLGLDRRTFGDILVEKDRAQVLVDKRFTQFFIDHISKIAKTPVKLKEVGFERLL 170

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +    +SK+ ++  M L   ++ + F  S ++A + +    +K+N SII N    + L 
Sbjct: 171 RVQEAQVSKEILASSMRL-DKLIASSFKLSRSDASQLIFGKHVKVNYSIIDNPSYLVGLN 229

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
           D  S       FG     I  
Sbjct: 230 DLISVR----RFG--RFKIVK 244


>gi|167753109|ref|ZP_02425236.1| hypothetical protein ALIPUT_01380 [Alistipes putredinis DSM 17216]
 gi|167659423|gb|EDS03553.1| hypothetical protein ALIPUT_01380 [Alistipes putredinis DSM 17216]
          Length = 373

 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 71/248 (28%), Gaps = 48/248 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++++
Sbjct: 11  PTGK-LHLGHYVGSLRRRVELQNSGEFEKIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI          + Y +   D             +  +L     +  +V R+    +V+
Sbjct: 61  QNI------LEVALDYLSCGLDPAQSTLFIQSQVPELCELAFYYMNLVTVARLQRNPTVK 114

Query: 161 SRLK-------------REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           + ++             + Q +    F Y I QA D               G DQ   I 
Sbjct: 115 AEIQLRGFAEGNEEEGSQRQGIPVGFFTYPISQASDITAFK----ATTVPVGEDQEPMIE 170

Query: 208 CGIDLGERLKTPKLFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPY 255
              ++  +  +     L  P +             T    KM K+L   I+L+       
Sbjct: 171 QTREIVHKFNSVYGETLVMPGILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVK 230

Query: 256 NFWQYWRN 263
                   
Sbjct: 231 KKVMGMYT 238


>gi|325958372|ref|YP_004289838.1| tryptophanyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329804|gb|ADZ08866.1| tryptophanyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 365

 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 74/246 (30%), Gaps = 28/246 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +L +RG I    +   +     +        G   +   +H GH   +  L W QK G  
Sbjct: 36  VLMKRGIIFGQRDFGRIVKAMHEKSEFAVVSGMMPSGK-MHIGHKMIVDQLVWYQKHGAD 94

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    S     S RD   +  R   I   +E +    +  + +   + +       
Sbjct: 95  IFIPIADMES----FSARDIEFKESRELAI---VEYLTNYIALGLDFK--QKNIHCYLQS 145

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
               +     L    G   ++N M      ++      S +       ++Q  D +    
Sbjct: 146 E---NKTVQSLAYLTGKRVNLNEM------KAIYGFSGSTNISHLYVPLVQVADILHPQL 196

Query: 190 NY----DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT----SPLLTTASGTKMGKTL 241
                    +   G DQ  +I    D+ +RLK+   F          +T  +G KM  + 
Sbjct: 197 EEFGGPKPTVVPVGPDQDPHIRLTRDIADRLKSKFNFIAPSSTYHRFITGLTGDKMSSSK 256

Query: 242 SGAIWL 247
                 
Sbjct: 257 PKTAIF 262


>gi|260437271|ref|ZP_05791087.1| tryptophan--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292810581|gb|EFF69786.1| tryptophan--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 360

 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 54/199 (27%), Gaps = 24/199 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +       +I+
Sbjct: 11  PTGR-LHIGHYVGSLKRRVELQNSGEYDKIYIMIADAQAL---------TDNYDNPDKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           ENI     +   ++  G     +++        L  + +  +     +    N  +  E 
Sbjct: 61  ENI---VEVALDYLSCGIDPEKSVIFIQSMVPELTELTFYYMNLVTEARLHRNPTIKSEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                       F    Y I QA D               G DQ   +    ++  +  T
Sbjct: 118 EMRGFGGTIPAGF--LCYPISQASDITAFK----ATTVPVGEDQMPMLEQAREIVNKFNT 171

Query: 219 PKLFALTSPLLTTASGTKM 237
                L  P +        
Sbjct: 172 IYGETLVEPQILLPDNKAC 190


>gi|254669878|emb|CBA04354.1| Tryptophanyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 280

 Score = 39.0 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 77/284 (27%), Gaps = 35/284 (12%)

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM------LSFE 157
           +  + + ++++  G                 ++   +L  I +   +NR       +   
Sbjct: 4   QSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITAKGLMNRAHAYKAAVQAN 63

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           +  ++   +  +    F+Y IL   D +      +      G DQ  ++    D+  R  
Sbjct: 64  AENNQEDPDFGVEMGLFSYPILMTADILMF----NANEVPVGRDQIQHVEMARDIAGRFN 119

Query: 218 TPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                  T P         LL    G KM K+    I L +                   
Sbjct: 120 YRFQELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND-----------KKTQKS 168

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           V      +        +     +       K       T           A   A +   
Sbjct: 169 VNKIITNM----KEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLAEGLAWGEAKKLLA 224

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
             I+++         +  +    +  ++ +AG   +  EAR  L
Sbjct: 225 AKINAELAEPRERYNELTADPSQIEEIL-QAGAQKARKEARELL 267


>gi|309805774|ref|ZP_07699811.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|309805972|ref|ZP_07699999.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|312874097|ref|ZP_07734132.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|312874735|ref|ZP_07734754.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329920944|ref|ZP_08277493.1| tryptophan--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308164894|gb|EFO67140.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308167654|gb|EFO69806.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|311089480|gb|EFQ47905.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311090437|gb|EFQ48846.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|328935509|gb|EGG31980.1| tryptophan--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 339

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNPEKIKNSLI 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 64  QVALDY----LAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIKQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 120 GFNDSLPIGFLN--YPVSQAADITAFK----ASIIPVGDDQEPMLEQTREIVR 166


>gi|253581558|ref|ZP_04858783.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           varium ATCC 27725]
 gi|251836628|gb|EES65163.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           varium ATCC 27725]
          Length = 236

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 8/62 (12%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             M +   +   G A S  E  + ++  +IKIN    +   +++  +D      I    G
Sbjct: 2   EEMRINKYLASLGIA-SRREVDKMIEEGSIKINGEKAT-PGIKVSDKDEI---YI---RG 53

Query: 408 KK 409
           KK
Sbjct: 54  KK 55


>gi|313836059|gb|EFS73773.1| ribosomal protein S4 [Propionibacterium acnes HL037PA2]
 gi|314929595|gb|EFS93426.1| ribosomal protein S4 [Propionibacterium acnes HL044PA1]
 gi|314970518|gb|EFT14616.1| ribosomal protein S4 [Propionibacterium acnes HL037PA3]
 gi|328906196|gb|EGG25971.1| 30S ribosomal protein S4 [Propionibacterium sp. P08]
          Length = 201

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQLVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|325265440|ref|ZP_08132163.1| S4 domain protein [Clostridium sp. D5]
 gi|324029298|gb|EGB90590.1| S4 domain protein [Clostridium sp. D5]
          Length = 71

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           I   E    + L   +  AG   S  EA+  ++   +K+N  
Sbjct: 4   IKLRESDEFIKLGQALKAAGLVDSGVEAKEVVQDGMVKVNGE 45


>gi|314924148|gb|EFS87979.1| ribosomal protein S4 [Propionibacterium acnes HL001PA1]
          Length = 201

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|329893623|ref|ZP_08269757.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC3088]
 gi|328923550|gb|EGG30862.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC3088]
          Length = 206

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+           GFA++  EAR+ +    + +N S+++    Q+
Sbjct: 78  EAARRKGATGENLLQLLESRLDNVVYRMGFASTRAEARQLVSHKGVLVNGSVVNVPSYQV 137

Query: 392 KLQD 395
           +  D
Sbjct: 138 QPGD 141


>gi|281425343|ref|ZP_06256256.1| tryptophan--tRNA ligase [Prevotella oris F0302]
 gi|281400506|gb|EFB31337.1| tryptophan--tRNA ligase [Prevotella oris F0302]
          Length = 361

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 62/235 (26%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++  +    ++ R+ M    + 
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGDYDRMFVFMADVQALTDNADNPEKIRQNMIEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +     +                   L  +    +     S    N  +  E   
Sbjct: 70  YLSAGLDPQLCTLYIQSQIPE----------LAELTTYLMNLVSVSRVQRNPTVKTEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y + QA D               G DQ   I    +L  R     
Sbjct: 120 RNFEANIPMGF--FCYPVSQAADIAAFK----ATTIPAGEDQEPMIELTRELVRRFNQVY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+ +  + +   +    
Sbjct: 174 SEVLVEPNIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWTKVKSMYT 228


>gi|297588221|ref|ZP_06946865.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 53516]
 gi|297574910|gb|EFH93630.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 53516]
          Length = 198

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+++A FA+S  +AR+ +    I++N   +     Q+          
Sbjct: 94  NLVLRASFASSIRQARQMVSHGLIRVNGKKVDIPSYQVAEGSVIELKE 141


>gi|209886355|ref|YP_002290212.1| pseudouridine synthase, Rsu [Oligotropha carboxidovorans OM5]
 gi|209874551|gb|ACI94347.1| pseudouridine synthase, Rsu [Oligotropha carboxidovorans OM5]
          Length = 693

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 36/124 (29%), Gaps = 5/124 (4%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
                +     +   +E    +K    E         E +    A    F      +  P
Sbjct: 290 FERDRDERAPRRNAWQEHPRGEKRERFERDERPRRDNEDDSKIFAKRPAFGGRGGYRERP 349

Query: 338 TIS----ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +      K     G  +  ++ +AG   S  +A   +    + +N  +I +  L +  
Sbjct: 350 ASTDKRAAPKKADKSGERIAKVVARAGLC-SRRDAEDWIMQGRVAVNGRVIGSPALDVTA 408

Query: 394 QDFD 397
           +D  
Sbjct: 409 RDVI 412


>gi|329767515|ref|ZP_08259038.1| tryptophanyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328835849|gb|EGF85571.1| tryptophanyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 337

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 22/199 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ     +   ++    ++         +       ++ E
Sbjct: 11  PTGK-LHLGHYVGSLKNRIALQNEDDTEVFIMIADQQAL---------TDNADNPGKVIE 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           NI     +    +     KT   + +    L  +    +     S    N  +  E    
Sbjct: 61  NI-TEVALDYLAVGIDPSKTTIFIQSQIPQLAELYMYYMNLVSVSRLHRNPTVKQEINDK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
           +        F  F Y + QA D       +       G DQ   +    ++     R   
Sbjct: 120 KFGESIPAGF--FTYPVSQAADITAFKATH----VPVGEDQKPMLEQTREIVRDFNRTYN 173

Query: 219 PKLFALTSPLLTTASGTKM 237
            ++  L   +L   +  ++
Sbjct: 174 KEVLVLPEIVLPPKNHARL 192


>gi|312871289|ref|ZP_07731387.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872640|ref|ZP_07732705.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|315654039|ref|ZP_07906955.1| tryptophan--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|311091682|gb|EFQ50061.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093303|gb|EFQ51649.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488735|gb|EFU78381.1| tryptophan--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 339

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNPEKIKNSLI 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 64  QVALDY----LAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIKQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 120 GFNDSLPIGFLN--YPVSQAADITAFK----ASIIPVGDDQEPMLEQTREIVR 166


>gi|296126890|ref|YP_003634142.1| ribosomal protein S4 [Brachyspira murdochii DSM 12563]
 gi|296018706|gb|ADG71943.1| ribosomal protein S4 [Brachyspira murdochii DSM 12563]
          Length = 208

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA S N+AR+ +    I +N   +S     IK+ D  S
Sbjct: 102 NVVYRLGFAKSRNQARQFVAHGFISVNGKKMSIPSYSIKVGDKIS 146


>gi|15677662|ref|NP_274823.1| hypothetical protein NMB1826 [Neisseria meningitidis MC58]
 gi|7227080|gb|AAF42161.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316984429|gb|EFV63402.1| S4 RNA-binding domain protein [Neisseria meningitidis H44/76]
          Length = 123

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE    +H R              +      ++   ++  ++ +  + L  L+   G A 
Sbjct: 14  TEQAVRIHRRFFGNFGYGGGRCYNNGLFLQGNIMEATVYLED-NEYIALCDLLKLVGLAE 72

Query: 364 STNEARRHLKSNAIKINNS 382
           S  +A+  +    +  N  
Sbjct: 73  SGGQAKAFIAEGLVLRNGE 91


>gi|253578001|ref|ZP_04855273.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850319|gb|EES78277.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 323

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + +   + +AG   S  EA R ++   I +N     +   ++ L+D     NI +  
Sbjct: 11  DEKIRINKYLSEAGIC-SRREADRMIEEGRITVNGKKAES-GQKVSLEDEICADNIPVHK 68

Query: 407 GKKNHIIC 414
            +K  ++ 
Sbjct: 69  NEKKVLLL 76


>gi|171059203|ref|YP_001791552.1| RNA-binding S4 domain-containing protein [Leptothrix cholodnii
           SP-6]
 gi|170776648|gb|ACB34787.1| RNA-binding S4 domain protein [Leptothrix cholodnii SP-6]
          Length = 74

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           +GL  L+   G A S   A+  +    ++I+  
Sbjct: 13  IGLDALLKATGLADSGGAAKALIAQGLVQIDGQ 45


>gi|156083837|ref|XP_001609402.1| leucyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796653|gb|EDO05834.1| leucyl-tRNA synthetase, putative [Babesia bovis]
          Length = 782

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 53/186 (28%), Gaps = 19/186 (10%)

Query: 44  LTASSLHAGHLTQLMLL------FWLQKTGHKPISLMG-GGTSIIGDPSFRDESRRMMR- 95
            +   LH GHL     L        +Q  G++ +  +G     +   P+ R         
Sbjct: 121 PSGEGLHVGHLLGYTALDVVCRYKRMQ--GYQVLCPIGWDSFGL---PAERYAESVGRDV 175

Query: 96  SQEIQENIEKIKGIFSSF-IKYGTGKT----DALMLNNETWLCSIKYIDLLREIGSFFSV 150
            Q   ENI + K         +   +     D        W+    Y   +    +   V
Sbjct: 176 KQVTLENIARFKHQLKRMGFAFDWSRELATSDPGYYKWTQWMFQEFYRSGIA-YRANQLV 234

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           N      +V +  +    LS      +  +      L  +   +  + G D        I
Sbjct: 235 NWCPDLGTVLANEEVRNGLSARGGFPVYRKNAQQWLLRISQYAQRLLDGLDALDWPQSII 294

Query: 211 DLGERL 216
           D  ++ 
Sbjct: 295 DAQKKW 300


>gi|332798233|ref|YP_004459732.1| 30S ribosomal protein S4 [Tepidanaerobacter sp. Re1]
 gi|332695968|gb|AEE90425.1| ribosomal protein S4 [Tepidanaerobacter sp. Re1]
          Length = 208

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 22/36 (61%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA+S  +AR+ ++   +++N   ++    Q+K +D
Sbjct: 108 GFASSRPQARQLVRYGHVQVNGKRVTIPSYQVKEKD 143


>gi|304382274|ref|ZP_07364781.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           marshii DSM 16973]
 gi|304336631|gb|EFM02860.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           marshii DSM 16973]
          Length = 481

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-- 395
                  + +  + L   +  AG   S  EA   +++  + +N  +I+    +I   D  
Sbjct: 234 EYKEEHTDPNEPIRLNKYLANAGVC-SRREADEFIQAGVVTVNGQVITELGTKIVRTDEV 292

Query: 396 FDSTGNIKLSFGKKNHIICH 415
                 + L   KK +++ +
Sbjct: 293 KFHDQPVTLE--KKVYVLLN 310


>gi|270290922|ref|ZP_06197146.1| tryptophanyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280982|gb|EFA26816.1| tryptophanyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 340

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 77/284 (27%), Gaps = 47/284 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++       D +R   + +    
Sbjct: 13  PTGK-LHIGHYVGSLKNRVQLQNTGNYDTFIMIADMQAL------TDNARDPEKIRNSLI 65

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     S    N  +  E  + 
Sbjct: 66  QVALDY----LAVGIDPAKSTIFVQSQIPALSELTQHYMNLVSVSRLERNPTVKTEIKQK 121

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----- 216
              +     F    Y + QA D               G DQ   +    ++         
Sbjct: 122 AFGQSIPAGF--LTYPVSQAADITAFK----ADTVPVGDDQEPMLEQTREIVRSFNNIYG 175

Query: 217 ---------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT-------SPYNFWQY 260
                      P       P L      KM K+L+ AI+L  +         S Y   Q+
Sbjct: 176 KDVLVEPEGYFPPKGMGRIPGL--DGNAKMSKSLNNAIYLADDADTIQKKVMSMYTDPQH 233

Query: 261 WR-----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
            R     +I+   V ++            +     Q   + + K
Sbjct: 234 IRVEDPGHIEGNTVFTYLDIFDPDKEKVQELKDHYQAGGLGDVK 277


>gi|237737269|ref|ZP_04567750.1| ribosomal small subunit pseudouridine synthase A [Fusobacterium
           mortiferum ATCC 9817]
 gi|229421131|gb|EEO36178.1| ribosomal small subunit pseudouridine synthase A [Fusobacterium
           mortiferum ATCC 9817]
          Length = 230

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              M L   + + G   S  E ++ L +  I++N+ I+ N +  IK  
Sbjct: 2   EDKMRLDKFLTECGL-GSRREVKKLLDNGKIRVNDIIVKNPQANIKES 48


>gi|82540232|ref|XP_724451.1| tyrosyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479091|gb|EAA16016.1| tyrosyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 372

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 71/221 (32%), Gaps = 24/221 (10%)

Query: 38  AYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
            Y G++ +   +H   G L +  ++  L   G   I  +    + + +   +        
Sbjct: 58  CYDGFEPSGR-MHIAQG-LLKSHIVNTLTNNGCTFIFWIADWFAQLNN---KMSGDLNKI 112

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK--YIDLLREIGSFFSVNRM 153
            +  Q  IE  K         G    +   +     +      Y   + +I   F++NR+
Sbjct: 113 KKVGQYFIEVWKS-------CGMNMENVQFMWASDEINKNPDKYWSTVIDISRSFNINRI 165

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
               ++  R + E +    +  Y  +Q  D   L    +  +   G+DQ    +   +  
Sbjct: 166 KRCLTIMGRTEGEDNY-CSQILYPCMQCADIFFL----NVDICQLGTDQRKVNMLAREYC 220

Query: 214 ERLKTPKLFALTSPLL---TTASGTKMGKTLSGAIWLNKEM 251
           +  K  K   + S  +         KM K+   +     + 
Sbjct: 221 DIKKIKKKPVILSHGMLPGLLEGQEKMSKSDENSAIFMDDN 261


>gi|315658522|ref|ZP_07911394.1| S4 domain-containing protein YlmH [Staphylococcus lugdunensis
           M23590]
 gi|315496851|gb|EFU85174.1| S4 domain-containing protein YlmH [Staphylococcus lugdunensis
           M23590]
          Length = 264

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----TGNIKLSFG---KK-NHII 413
            S + A++ ++   +K+N++I+     Q++  D  S         L  G   KK  + I
Sbjct: 199 KSRSIAKQLIEKKRVKVNHTIVEASDFQLEPNDLLSIQGYGRAQLLEIGGRTKKDKYYI 257


>gi|304386421|ref|ZP_07368754.1| tryptophan--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327778|gb|EFL95005.1| tryptophan--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 340

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 77/284 (27%), Gaps = 47/284 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++       D +R   + +    
Sbjct: 13  PTGK-LHIGHYVGSLKNRVQLQNTGNYDTFIMIADMQAL------TDNARDPEKIRNSLI 65

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     S    N  +  E  + 
Sbjct: 66  QVALDY----LAVGIDPAKSTIFVQSQIPALSELTQHYMNLVSVSRLERNPTVKTEIKQK 121

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----- 216
              +     F    Y + QA D               G DQ   +    ++         
Sbjct: 122 AFGQSIPAGF--LTYPVSQAADITAFK----ADTVPVGDDQEPMLEQTREIVRSFNNIYG 175

Query: 217 ---------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT-------SPYNFWQY 260
                      P       P L      KM K+L+ AI+L  +         S Y   Q+
Sbjct: 176 KDVLVEPEGYFPPKGMGRIPGL--DGNAKMSKSLNNAIYLADDADTIQKKVMSMYTDPQH 233

Query: 261 WR-----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
            R     +I+   V ++            +     Q   + + K
Sbjct: 234 IRVEDPGHIEGNTVFTYLDIFDPDKEKVQELKDHYQAGGLGDVK 277


>gi|283955811|ref|ZP_06373302.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792766|gb|EFC31544.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 319

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/323 (11%), Positives = 95/323 (29%), Gaps = 41/323 (12%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+  ++    +    ++              
Sbjct: 1   MRVLTGLQPSGD-LHIGNYFGAIKQMVDAQEK-NQMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + ++L   +  F  +  + 
Sbjct: 46  SSQDGEKIQQNSLKAAAAFLSLGIDPQKSVFWLQSD---VKEVMELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L A D +     +D ++   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMAADIL----LFDTQIVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           ++        T P         ++    G KM K+    I +       ++  +  +   
Sbjct: 159 KVNNEWGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTIDI-------FSSEKTLKKQI 211

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA--TEITTMVHGREEAEKAATAA 323
            + V               +     +       +K +    E     +G  +        
Sbjct: 212 SSIVTDSTALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKMYLNELVN 271

Query: 324 MECFDMSIHSQHMPTISISKDEV 346
               +       +        E+
Sbjct: 272 AYFKEAREKYNELLEKPSHLKEI 294


>gi|291542663|emb|CBL15773.1| ribosomal large subunit pseudouridine synthase D [Ruminococcus
           bromii L2-63]
          Length = 306

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            G+ L   I  A    S + A   +++ A+ +N+S++S +K ++   D 
Sbjct: 11  SGVRLDKFISDANIDLSRSAAVNLIENGAVLVNDSVVS-KKYKLSQGDI 58


>gi|218296418|ref|ZP_03497161.1| hemolysin A [Thermus aquaticus Y51MC23]
 gi|218243212|gb|EED09743.1| hemolysin A [Thermus aquaticus Y51MC23]
          Length = 235

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G   S  +A+R +    +++   +++     +   
Sbjct: 7   LVEKGLVESREKAKRLIAEGKVRVGGRVVTKPAHPVPEG 45


>gi|66818983|ref|XP_643151.1| hypothetical protein DDB_G0276449 [Dictyostelium discoideum AX4]
 gi|60471215|gb|EAL69178.1| hypothetical protein DDB_G0276449 [Dictyostelium discoideum AX4]
          Length = 401

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKL 404
           +  ++ +AG A S  +A   +    +K+N  II  E++ +K  D        IK+
Sbjct: 140 IQKILARAGIA-SRRKAEELIIDGRVKVNGKIIKMEEILVKPHDIITVDDKPIKV 193


>gi|322695401|gb|EFY87210.1| 30S ribosomal subunit S4, putative [Metarhizium acridum CQMa 102]
          Length = 525

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+S  +AR+ +   A+K+N   + +   Q+   D
Sbjct: 165 FASSVRQARQFVIHGAVKVNGKKMVHPSYQLNPGD 199


>gi|289551026|ref|YP_003471930.1| S4-like RNA binding domain-containing hypothetical protein
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180558|gb|ADC87803.1| S4-like RNA binding domain-containing hypothetical protein
           [Staphylococcus lugdunensis HKU09-01]
          Length = 264

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----TGNIKLSFG---KK-NHII 413
            S + A++ ++   +K+N++I+     Q++  D  S         L  G   KK  + I
Sbjct: 199 KSRSIAKQLIEKKRVKVNHTIVEASDFQLEPNDLLSIQGYGRAQLLEIGGRTKKDKYYI 257


>gi|156310431|ref|XP_001617741.1| hypothetical protein NEMVEDRAFT_v1g156832 [Nematostella vectensis]
 gi|156195585|gb|EDO25641.1| predicted protein [Nematostella vectensis]
          Length = 207

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 342 SKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            K + + G  LL+L+           GF ++ +EAR+ +   AI +N   ++     +K+
Sbjct: 81  DKKKGNTGANLLSLLESRLDNVVYRMGFGSTRSEARQLVSHKAITVNGQSVNIPSYMVKV 140

Query: 394 QD 395
            D
Sbjct: 141 GD 142


>gi|55980515|ref|YP_143812.1| hemolysin [Thermus thermophilus HB8]
 gi|55771928|dbj|BAD70369.1| hemolysin [Thermus thermophilus HB8]
          Length = 235

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G   S  +A+R ++   +++   ++      +   
Sbjct: 7   LVERGLVESREKAKRLIQEGKVRVEGKVVQKPAHPVPEG 45


>gi|322712486|gb|EFZ04059.1| 30S ribosomal subunit S4 [Metarhizium anisopliae ARSEF 23]
          Length = 489

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+S  +AR+ +   A+K+N   + +   Q+   D
Sbjct: 129 FASSVRQARQFVIHGAVKVNGKKMIHPSYQLNPGD 163


>gi|297625817|ref|YP_003687580.1| 30S ribosomal protein S4 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921582|emb|CBL56136.1| 30S ribosomal protein S4 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 201

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AGFA++  +AR+ +    I +N   ++    ++   D   
Sbjct: 95  NVVYRAGFASTRRQARQMVSHGHILVNGKKVNIPSFRVAPLDIID 139


>gi|241888511|ref|ZP_04775819.1| tryptophan-tRNA ligase [Gemella haemolysans ATCC 10379]
 gi|241864778|gb|EER69152.1| tryptophan-tRNA ligase [Gemella haemolysans ATCC 10379]
          Length = 338

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 22/199 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ     +   ++    ++         +       ++ E
Sbjct: 11  PTGK-LHLGHYVGSLKNRIALQNEDDTEVFIMIADQQAL---------TDNADNPGKVIE 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           NI     +    +     KT   + +    L  +    +     S    N  +  E    
Sbjct: 61  NI-TEVALDYLAVGIDPKKTTIFIQSQIPQLAELYMYYMNLVSVSRLHRNPTVKQEINDK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
           +        F  F Y + QA D       +       G DQ   +    ++     R   
Sbjct: 120 KFGESIPAGF--FTYPVSQAADITAFKATH----VPVGEDQKPMLEQTREIVRDFNRTYN 173

Query: 219 PKLFALTSPLLTTASGTKM 237
            ++  L   +L   +  ++
Sbjct: 174 KEVLVLPEIVLPPKNHARL 192


>gi|95930497|ref|ZP_01313233.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684]
 gi|95133537|gb|EAT15200.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684]
          Length = 206

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 3/153 (1%)

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
           NF    + +    V  +        +          G          + ++T     R  
Sbjct: 4   NFTAKGKIVRRLGVNIYGNPKYDRLLERRPTPPGEHGAGRRGKPSDYSRQLTEKQKVRFC 63

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
              +       FD +   + +   ++    V     L  ++ + G A++ +EAR  ++  
Sbjct: 64  YGLSEKQFRRVFDKAKAMKGVTGHNM---LVLLERRLDNMVFRLGLASTRSEARLFVRHG 120

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              +N   +      ++  D           GK
Sbjct: 121 HFLVNGRKVDIPSYLVRAGDVIEVREKSRKIGK 153


>gi|302024660|ref|ZP_07249871.1| tryptophanyl-tRNA synthetase II [Streptococcus suis 05HAS68]
          Length = 150

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 40/148 (27%), Gaps = 15/148 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G H+    +    ++       D ++   +  E   
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQDAGQHELFVFLADQQAL------TDHAKEPQKIVESVG 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+                KT   + +    L  +    +     +    N  +  E  + 
Sbjct: 65  NVALDY----LAAGLDPAKTTIFIQSQIPELAELTMYYMNLVSVARLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAK 189
                    F    Y + QA D     +
Sbjct: 121 GFGEGIPAGF--LVYPVSQAADITAFRQ 146


>gi|293554034|ref|ZP_06674634.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601816|gb|EFF32068.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 336

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 52/177 (29%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 11  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFVMIADMQAL---------TDNAKNPEKVSS 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     K+   + +    L  +    L          N  +  E  + 
Sbjct: 61  NVLQV-ALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGRVRRNPTVKTEIEQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +      + F  F Y + QA D           L   G DQ   +    ++ +    
Sbjct: 120 KFGESVPIGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVQSFNH 170


>gi|288818043|ref|YP_003432390.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
 gi|288787442|dbj|BAI69189.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
 gi|308751644|gb|ADO45127.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
          Length = 209

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 8/69 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             SK + + G  LL L+ +         G A +  +AR+ +    I +N   +     ++
Sbjct: 80  EASKAKGNTGQVLLQLLERRLDNVVYRLGMAVTRRQARQMIAHGHILVNGKKVDIPSYRV 139

Query: 392 KLQDFDSTG 400
           ++ D     
Sbjct: 140 QVGDIIELK 148


>gi|218462484|ref|ZP_03502575.1| hemolysin A [Rhizobium etli Kim 5]
          Length = 261

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 17/39 (43%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                L  L+V  G   S + AR  L+   ++I   +++
Sbjct: 17  QNSQRLDQLLVSRGLFASRSRARDALQRGTVRIAGQVVT 55


>gi|322384358|ref|ZP_08058056.1| 30S ribosomal protein S4-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150860|gb|EFX44297.1| 30S ribosomal protein S4-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 199

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 3/112 (2%)

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
             G            ++      R             ++ +I    +P IS     +   
Sbjct: 34  QHGPTQRRKVSGYGMQLMEKQKLRHMYGLNEKQFHNLYNKAIK---LPGISGENFMILLE 90

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             L  L+ + GFA S   AR+ +    + +N   +     Q+ + D      
Sbjct: 91  SRLDNLVFRLGFANSRAGARQLVSHGHVTVNGKKVDIASYQVSVGDVIGLRE 142


>gi|289422683|ref|ZP_06424523.1| ribosomal protein S4 [Peptostreptococcus anaerobius 653-L]
 gi|289156862|gb|EFD05487.1| ribosomal protein S4 [Peptostreptococcus anaerobius 653-L]
          Length = 201

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A S  +AR+ +    I +N   ++     + + D  S   
Sbjct: 93  NLVYRMGLANSIRQARQMVGHGNIHVNGRKVNIPSFIVSVGDEISLRE 140


>gi|2982724|dbj|BAA25288.1| tryptophan-tRNA synthetase [Cavia porcellus]
          Length = 305

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 30/213 (14%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           +H GHL   +   WLQ   + P+ +              D+ + + +   +++       
Sbjct: 3   MHVGHLIPFIFTKWLQDVFNVPLVV-----------QMSDDEKYLWKDLTLEQAYGYTLE 51

Query: 109 IFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                I  G       + ++  ++  S  +   + +I    + N+      V+       
Sbjct: 52  NAKDIIACGFDINKTFIFSDLEYMGMSPGFYKNVVKIQKHVTFNQ------VKGIFGFTD 105

Query: 168 SLSFLEFNYMILQ-----AYDFVELAKNYDCRLQM---GGSDQWGNIICGIDLGERLKTP 219
           S    + ++  +Q     +  F ++ ++    +Q       DQ        D+  R+  P
Sbjct: 106 SDCIGKISFPAVQAAPSFSNSFPQIFRDR-TDIQCLIPCAIDQDPYFRMTRDVAPRIGYP 164

Query: 220 KL---FALTSPLLTTASGTKMGKTLSGAIWLNK 249
           K     +   P L  A         + +I+L  
Sbjct: 165 KPALLHSTFFPALQGAQTKMSASDPNSSIFLTD 197


>gi|320101354|ref|YP_004176946.1| 30S ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
 gi|319753706|gb|ADV65464.1| SSU ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
          Length = 252

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + R + LL L+    G+A +  EARR +     K++  +  + K  + L D   
Sbjct: 39  IERSIPLLVLVRNVLGYAETAREARRLIAGGHFKVDGKVRKDYKFPVGLMDVIE 92


>gi|319409851|emb|CBY90163.1| Uncharacterized protein ybcJ [Neisseria meningitidis WUE 2594]
          Length = 104

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 24/73 (32%), Gaps = 1/73 (1%)

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           +  R              +      ++   ++  ++ +  + L  L+  AG A S  +A+
Sbjct: 1   MCCRFCGNFGYGGGRCYNNGLFLQGNIMEATVYLED-NEYIALCDLLKLAGLAESGGQAK 59

Query: 370 RHLKSNAIKINNS 382
             +    +  N  
Sbjct: 60  AFIAEGLVLRNGE 72


>gi|312127649|ref|YP_003992523.1| hemolysin a [Caldicellulosiruptor hydrothermalis 108]
 gi|311777668|gb|ADQ07154.1| hemolysin A [Caldicellulosiruptor hydrothermalis 108]
          Length = 269

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+V+ G A S  +A+  + S  + +NN  I      I  
Sbjct: 8   LLVEKGLAESREKAKALILSGNVYVNNQKIEKAGEMIDE 46


>gi|260592795|ref|ZP_05858253.1| tryptophan--tRNA ligase [Prevotella veroralis F0319]
 gi|260535326|gb|EEX17943.1| tryptophan--tRNA ligase [Prevotella veroralis F0319]
          Length = 362

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 86/323 (26%), Gaps = 45/323 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++         +      ++I+
Sbjct: 11  PTGK-LHLGHYVGSLRRRVELQNLGDYDRMFVFMADVQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI     +   ++  G       +          +       + S   V R  + ++  
Sbjct: 61  QNI---IEVALDYLSAGLSPEKCTLYIQSQIPELAELTTFFMNLISVSRVQRNPTVKTEI 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                E ++    F Y + QA D               G DQ   I    ++  R     
Sbjct: 118 KMRNFEANIPMGFFAYPVSQAADIAAFK----ATTVPAGEDQEPMIEVTREIVRRFNQLY 173

Query: 221 LFALTSPLL------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------ 262
              L  P +             T    KM K+L   I+L+ +  + +   +         
Sbjct: 174 APVLVEPNIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKTMYTDPTHL 233

Query: 263 ------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA 316
                 +++   V ++    +T      +   + Q  +  +A                  
Sbjct: 234 NVSDPGHVEGNAVFTYLDAFST-DEDFAEFWPEFQNLDELKAAYTAGGIGDMKCKKLLNN 292

Query: 317 EKAATAAMECFDMSIHSQHMPTI 339
                          + Q +P I
Sbjct: 293 VLNKILDPIRARRHEYEQDIPEI 315


>gi|219685970|ref|ZP_03540761.1| tryptophan--tRNA ligase [Borrelia garinii Far04]
 gi|219672487|gb|EED29535.1| tryptophan--tRNA ligase [Borrelia garinii Far04]
          Length = 350

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 70/223 (31%), Gaps = 34/223 (15%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEK-YETYFIIADLHTLTTKPDLKS-------INTIPF 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+   + +   ++  G       +          +  +L        +V R+    S++ 
Sbjct: 62  NV---REMVLDYLACGINPNKVSIYLQSAI---PELFELYLIFSMIVTVARLQRIPSIKD 115

Query: 162 RLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
                  + + +    Y +L + D +         L   G D   +I    +L  R    
Sbjct: 116 MSIAAGLKEIPYGLLGYPVLMSADILMAK----ANLVPVGRDNESHIEFARELARRFNYL 171

Query: 219 ---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                      +F  + PL+      KM K+L  AI+L  +  
Sbjct: 172 YENNFFPIPESIFTDSRPLVGICGKNKMSKSLDNAIFLKDDEN 214


>gi|116618583|ref|YP_818954.1| cell division protein [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097430|gb|ABJ62581.1| Cell division protein, S4-like domain [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 265

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL-----TLIV 357
           +     +    +   +     +    +S+    +  +    ++      LL       ++
Sbjct: 135 SRWQIIIDSKMQHYMQQMVTKIGHVQVSLIECDLNNVLPHINDWEENFLLLSSLRLDTVI 194

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AGF  S + A++ ++ N +++N S I+   +++ + D        +S   + H    +
Sbjct: 195 SAGFDLSRSGAKKLIEENQVRVNWSEIAKPDVELAIGD-------VISV--RKHGRVQI 244


>gi|23007931|ref|ZP_00049587.1| COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 179

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   I +AG A S  +A   +++  + +N  ++++  + +   D  
Sbjct: 20  EGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGQVLTSPAINVTDSDRI 68


>gi|327444033|gb|EGE90687.1| ribosomal protein S4 [Propionibacterium acnes HL043PA1]
 gi|327449433|gb|EGE96087.1| ribosomal protein S4 [Propionibacterium acnes HL043PA2]
          Length = 201

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 100 AGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|298207286|ref|YP_003715465.1| tryptophanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849922|gb|EAP87790.1| tryptophanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 322

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 63/212 (29%), Gaps = 35/212 (16%)

Query: 50  HAGHLT-QLMLLFWLQ-KTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQEIQENIEK 105
           H G+L   ++    +     ++    +    S+  I D     E+ R          +  
Sbjct: 15  HLGNLLGAIIPAIEMSNDPKNESYLFIADLHSLTQIKD----AETLRQNTYATAATWLA- 69

Query: 106 IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
                     +G      +           +  +L   +  F+   R+    S + +  R
Sbjct: 70  ----------FGLDVNKTVFYRQSDI---PQVTELSWYLSCFYPYQRLTLAHSFKDKADR 116

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
            + ++   F Y +L A D +     YD  +   G DQ  +I    D+  R          
Sbjct: 117 LEDVNAGLFTYPMLMAADIL----IYDAEIIPVGKDQLQHIEMTRDVASRFHAKLGETFV 172

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLN 248
            P          +    G KM K+    I L 
Sbjct: 173 MPDGKIQEETMYIPGTDGAKMSKSKGNIINLF 204


>gi|254293522|ref|YP_003059545.1| RNA-binding S4 domain protein [Hirschia baltica ATCC 49814]
 gi|254042053|gb|ACT58848.1| RNA-binding S4 domain protein [Hirschia baltica ATCC 49814]
          Length = 315

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +      +   + ++G   S  EA   ++   I I+   ++    +I+  +
Sbjct: 8   DGEEPQRINKWLGQSGVC-SRREAEGLVEQGLISIDGVKVTEPGRKIEKGE 57


>gi|225016258|ref|ZP_03705450.1| hypothetical protein CLOSTMETH_00161 [Clostridium methylpentosum
           DSM 5476]
 gi|224950933|gb|EEG32142.1| hypothetical protein CLOSTMETH_00161 [Clostridium methylpentosum
           DSM 5476]
          Length = 208

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 3/114 (2%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
              A  Q  +  +       ++      +     +     + F+M+     M   ++ K 
Sbjct: 36  RSYAPGQHGQSRKKVSEYGLQLREKQMAKRYYNVSENQFYKYFEMAERKPGMTGENLLKI 95

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             SR   ++    +AGFA+S  EAR+ +  N  ++N   ++   L +K  D   
Sbjct: 96  LESRLDNIVY---RAGFASSRAEARQLVLHNHFRLNGKKVNICSLLVKPGDVIE 146


>gi|78779356|ref|YP_397468.1| RNA-binding S4 [Prochlorococcus marinus str. MIT 9312]
 gi|78712855|gb|ABB50032.1| RNA-binding S4 [Prochlorococcus marinus str. MIT 9312]
          Length = 58

 Score = 38.6 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   +      +S  EA+  +KS ++K+N  I +    ++   D
Sbjct: 1   MKLDQFLKWKNLVSSGGEAKTFIKSGSVKVNGVIETRRGRKLNKGD 46


>gi|298370567|ref|ZP_06981882.1| ribosomal protein S4 [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281177|gb|EFI22667.1| ribosomal protein S4 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 206

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GF ++  EAR+ +   AI +N  +++    Q+K  D  +   
Sbjct: 100 NVVYRLGFGSTRAEARQLVSHKAITVNGQVVNIPSYQVKAGDIIAVRE 147


>gi|196233446|ref|ZP_03132289.1| pseudouridine synthase [Chthoniobacter flavus Ellin428]
 gi|196222442|gb|EDY16969.1| pseudouridine synthase [Chthoniobacter flavus Ellin428]
          Length = 237

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            +  AG   S       + S  ++IN  ++++   Q+   D    G+  L 
Sbjct: 6   FLASAGL-GSRRGVEELITSGQVRINGQVVTDLSTQVGPTDAVKVGSRLLR 55


>gi|254418210|ref|ZP_05031934.1| conserved hypothetical protein, putative [Brevundimonas sp. BAL3]
 gi|196184387|gb|EDX79363.1| conserved hypothetical protein, putative [Brevundimonas sp. BAL3]
          Length = 259

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +    + +   + + G   S  EA   +    + I+   IS+   +I+  
Sbjct: 8   DGDEPVRVNKWLGQTGVC-SRREAESLIAEGLVSIDGETISDAGRKIEPG 56


>gi|194390522|dbj|BAG62020.1| unnamed protein product [Homo sapiens]
          Length = 181

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 15/35 (42%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           LD   ++     Y G   ++ ++H GHL   +   
Sbjct: 147 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTK 181


>gi|78043798|ref|YP_361091.1| 30S ribosomal protein S4 [Carboxydothermus hydrogenoformans Z-2901]
 gi|90101680|sp|Q3A9U3|RS4_CARHZ RecName: Full=30S ribosomal protein S4
 gi|77995913|gb|ABB14812.1| ribosomal protein S4 [Carboxydothermus hydrogenoformans Z-2901]
          Length = 208

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 3/128 (2%)

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           +  T          A  Q     +     A ++      +             F+M+   
Sbjct: 25  RCYTDKCAIARRNYAPGQHGHTRKKPTEYALQLREKQKAKRIYGVLEAQFRRYFEMAERQ 84

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
              P I+     V     L  ++ + G A S  +AR+ ++ N   +N   ++     +K+
Sbjct: 85  ---PGITGENLLVILERRLDNVVYRLGLAESRAQARQLVRHNFFTVNGRKVNIPSYLVKV 141

Query: 394 QDFDSTGN 401
            D  +   
Sbjct: 142 GDVIALKE 149


>gi|304393474|ref|ZP_07375402.1| ribosomal RNA large subunit methyltransferase J [Ahrensia sp.
           R2A130]
 gi|303294481|gb|EFL88853.1| ribosomal RNA large subunit methyltransferase J [Ahrensia sp.
           R2A130]
          Length = 250

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V+ G A S + A   +K   + I  + I+     +   
Sbjct: 12  QLLVERGMAPSRSRAADMIKRGCVMIAGTPITKPGQSLAPD 52


>gi|254468445|ref|ZP_05081851.1| ribosomal protein S4 [beta proteobacterium KB13]
 gi|207087255|gb|EDZ64538.1| ribosomal protein S4 [beta proteobacterium KB13]
          Length = 209

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  LL L+           G   S +E+R+ ++ N+I +N + ++    Q+K  D
Sbjct: 90  GENLLQLLESRLDNVVYRMGIGVSRSESRQLVRHNSITVNGNRVNIPSYQVKPGD 144


>gi|319643067|ref|ZP_07997699.1| hypothetical protein HMPREF9011_03300 [Bacteroides sp. 3_1_40A]
 gi|317385313|gb|EFV66260.1| hypothetical protein HMPREF9011_03300 [Bacteroides sp. 3_1_40A]
          Length = 1023

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 59/207 (28%), Gaps = 13/207 (6%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIG--DPSFRDESR--RMMRSQEIQENIEKIK 107
           G   ++       K G  P+ L+ G +  I   DP+        +   S  I  N     
Sbjct: 168 GATVKIRGTGTFSKAGTDPLVLIDGLSGNIDDVDPNDIQSISFLKDAASASIYGNRAANG 227

Query: 108 GIFSSFIKYGTGKTDALMLNNETW---------LCSIKYIDLLREIGSFFSVNRMLSFES 158
            I     K   GKT     N+  W         L S +Y +                 E 
Sbjct: 228 VILIETKKGAQGKTTITYSNSFGWQRPTELPDFLPSWEYAEYYNMAMRNMGKQEAYLPEQ 287

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           ++         ++   N++             ++  +Q G +    N+  G    E +  
Sbjct: 288 IQKYRDGSDPDNYPNVNHLKWLLESGSGFQHQHNLSIQGGNATTSYNLSVGYRNQEGMTA 347

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAI 245
                  + L T  S    G  L+  I
Sbjct: 348 KTSNERMTALFTMKSEIAKGLMLNLNI 374


>gi|294777249|ref|ZP_06742704.1| TonB-dependent receptor plug domain protein [Bacteroides vulgatus
           PC510]
 gi|294448869|gb|EFG17414.1| TonB-dependent receptor plug domain protein [Bacteroides vulgatus
           PC510]
          Length = 572

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 59/207 (28%), Gaps = 13/207 (6%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIG--DPSFRDESR--RMMRSQEIQENIEKIK 107
           G   ++       K G  P+ L+ G +  I   DP+        +   S  I  N     
Sbjct: 155 GATVKIRGTGTFSKAGTDPLVLIDGLSGNIDDVDPNDIQSISFLKDAASASIYGNRAANG 214

Query: 108 GIFSSFIKYGTGKTDALMLNNETW---------LCSIKYIDLLREIGSFFSVNRMLSFES 158
            I     K   GKT     N+  W         L S +Y +                 E 
Sbjct: 215 VILIETKKGAQGKTTITYSNSFGWQRPTELPDFLPSWEYAEYYNMAMRNMGKQEAYLPEQ 274

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           ++         ++   N++             ++  +Q G +    N+  G    E +  
Sbjct: 275 IQKYRDGSDPDNYPNVNHLKWLLESGSGFQHQHNLSIQGGNATTSYNLSVGYRNQEGMTA 334

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAI 245
                  + L T  S    G  L+  I
Sbjct: 335 KTSNERMTALFTMKSEIAKGLMLNLNI 361


>gi|317129994|ref|YP_004096276.1| pseudouridine synthase [Bacillus cellulosilyticus DSM 2522]
 gi|315474942|gb|ADU31545.1| pseudouridine synthase [Bacillus cellulosilyticus DSM 2522]
          Length = 237

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M +  L+   GF  S  E +  LK   + +N+ +I + K QI   +
Sbjct: 1   MRIDKLLSNTGF-GSRKEVKGLLKKGGVTVNSELIKDGKRQIDPSE 45


>gi|254882322|ref|ZP_05255032.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254835115|gb|EET15424.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 1033

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 59/207 (28%), Gaps = 13/207 (6%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIG--DPSFRDESR--RMMRSQEIQENIEKIK 107
           G   ++       K G  P+ L+ G +  I   DP+        +   S  I  N     
Sbjct: 178 GATVKIRGTGTFSKAGTDPLVLIDGLSGNIDDVDPNDIQSISFLKDAASASIYGNRAANG 237

Query: 108 GIFSSFIKYGTGKTDALMLNNETW---------LCSIKYIDLLREIGSFFSVNRMLSFES 158
            I     K   GKT     N+  W         L S +Y +                 E 
Sbjct: 238 VILIETKKGAQGKTTITYSNSFGWQRPTELPDFLPSWEYAEYYNMAMRNMGKQEAYLPEQ 297

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           ++         ++   N++             ++  +Q G +    N+  G    E +  
Sbjct: 298 IQKYRDGSDPDNYPNVNHLKWLLESGSGFQHQHNLSIQGGNATTSYNLSVGYRNQEGMTA 357

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAI 245
                  + L T  S    G  L+  I
Sbjct: 358 KTSNERMTALFTMKSEIAKGLMLNLNI 384


>gi|212690846|ref|ZP_03298974.1| hypothetical protein BACDOR_00333 [Bacteroides dorei DSM 17855]
 gi|265752348|ref|ZP_06088141.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212666606|gb|EEB27178.1| hypothetical protein BACDOR_00333 [Bacteroides dorei DSM 17855]
 gi|263237140|gb|EEZ22610.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 1023

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 59/207 (28%), Gaps = 13/207 (6%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIG--DPSFRDESR--RMMRSQEIQENIEKIK 107
           G   ++       K G  P+ L+ G +  I   DP+        +   S  I  N     
Sbjct: 168 GATVKIRGTGTFSKAGTDPLVLIDGLSGNIDDVDPNDIQSISFLKDAASASIYGNRAANG 227

Query: 108 GIFSSFIKYGTGKTDALMLNNETW---------LCSIKYIDLLREIGSFFSVNRMLSFES 158
            I     K   GKT     N+  W         L S +Y +                 E 
Sbjct: 228 VILIETKKGAQGKTTITYSNSFGWQQPTELPDFLPSWEYAEYYNMAMRNMGKQEAYLPEQ 287

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           ++         ++   N++             ++  +Q G +    N+  G    E +  
Sbjct: 288 IQKYRDGSDPDNYPNVNHLKWLLESGSGFQHQHNLSIQGGNATTSYNLSVGYRNQEGMTA 347

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAI 245
                  + L T  S    G  L+  I
Sbjct: 348 KTSNERMTALFTMKSEIAKGLMLNLNI 374


>gi|150002821|ref|YP_001297565.1| hypothetical protein BVU_0216 [Bacteroides vulgatus ATCC 8482]
 gi|149931245|gb|ABR37943.1| putative outer membrane protein, probably involved in nutrient
           binding [Bacteroides vulgatus ATCC 8482]
          Length = 1023

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 59/207 (28%), Gaps = 13/207 (6%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIG--DPSFRDESR--RMMRSQEIQENIEKIK 107
           G   ++       K G  P+ L+ G +  I   DP+        +   S  I  N     
Sbjct: 168 GATVKIRGTGTFSKAGTDPLVLIDGLSGNIDDVDPNDIQSISFLKDAASASIYGNRAANG 227

Query: 108 GIFSSFIKYGTGKTDALMLNNETW---------LCSIKYIDLLREIGSFFSVNRMLSFES 158
            I     K   GKT     N+  W         L S +Y +                 E 
Sbjct: 228 VILIETKKGAQGKTTITYSNSFGWQRPTELPDFLPSWEYAEYYNMAMRNMGKQEAYLPEQ 287

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           ++         ++   N++             ++  +Q G +    N+  G    E +  
Sbjct: 288 IQKYRDGSDPDNYPNVNHLKWLLESGSGFQHQHNLSIQGGNATTSYNLSVGYRNQEGMTA 347

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAI 245
                  + L T  S    G  L+  I
Sbjct: 348 KTSNERMTALFTMKSEIAKGLMLNLNI 374


>gi|15605314|ref|NP_220100.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789322|ref|YP_328408.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803014|ref|YP_002888208.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|255311405|ref|ZP_05353975.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317706|ref|ZP_05358952.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6226201|sp|O84589|SYW_CHLTR RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|3329028|gb|AAC68187.1| Tryptophanyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167852|gb|AAX50860.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231274248|emb|CAX11042.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436119|gb|ADH18293.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437048|gb|ADH19218.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437979|gb|ADH20140.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140481|gb|ADH97239.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis G/9301]
 gi|297748715|gb|ADI51261.1| Tryptophanyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749595|gb|ADI52273.1| Tryptophanyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 346

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 97/308 (31%), Gaps = 47/308 (15%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESR 91
                  G   T   LH GH    +M    LQ  + +    ++    ++        ++R
Sbjct: 2   KKKRVLTGDRPTGK-LHLGHWIGSIMNRLQLQNDSRYDCFFIIADLHTL------TTKTR 54

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +     EI +    I  + + ++  G     + +          +  +L         +N
Sbjct: 55  KE----EILQIDNHIYDVLADWLSVGIDPEKSAIYLQSAI---PEIYELNLIFSMLTPLN 107

Query: 152 RMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            ++      E  R+    E+SLS     Y +LQ+ D +         L   G D   ++ 
Sbjct: 108 HIMGIPSIKEMARNASLNEESLSHGLIGYPVLQSADIL----LAKAHLVPVGKDNEAHVE 163

Query: 208 CGIDLGERLK--TPKLF-------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
              D+ +       ++F          + L+ T    KM K+ + AI+L+ +  +     
Sbjct: 164 LTRDIAKTFNRLYGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKI 223

Query: 259 QYWR------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIAT 304
           +                ++   +  +            +   + +   I   E K  +A 
Sbjct: 224 RKLYTDPNRIHATTPGRVEGNPLFIYHDLFNPHKEEVEEFKTRYRQGCIRDVEVKARLAE 283

Query: 305 EITTMVHG 312
           EI   ++ 
Sbjct: 284 EINLFLNP 291


>gi|288553422|ref|YP_003425357.1| tryptophanyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544582|gb|ADC48465.1| tryptophanyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 329

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 36/312 (11%), Positives = 84/312 (26%), Gaps = 36/312 (11%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP--ISLMGGGTSIIGDPSFRDESRRMM 94
           T + G   + + L  G+    M         ++      +    + I  P  R + R   
Sbjct: 3   TVFSGIQPSGT-LTLGNYLGAMK--HFVDMQNEANCYFCIVDQHA-ITVPQDRLKLR--- 55

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRM 153
                    E I+ + + ++  G     + +         +     L  +    + +  +
Sbjct: 56  ---------ENIRSLAALYLAVGIDPNKSTLFIQSE----VPAHAQLGWMMQCVAYIGEL 102

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   ++++S     Y  L A D +     Y   +   G DQ  ++    DL 
Sbjct: 103 ERMTQFKDKSDGKEAVSASLLTYPPLMAADIL----LYKTDIVPVGEDQKQHLELTRDLA 158

Query: 214 ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           ER         T P +          +L+       +       +    +          
Sbjct: 159 ERFNKKYNDIFTIPEVRIPKVGARIMSLNDPSKKMSKSNPNAKSYISMLDDPKTITKKIK 218

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             +T               K   E K  ++  ++        + +      +        
Sbjct: 219 SAVTDTDGE---------IKFNREDKPAVSNLLSIYSLCSGISIEELERKYQGAGYGEFK 269

Query: 334 QHMPTISISKDE 345
           Q +  + +S  E
Sbjct: 270 QDLADVVVSTLE 281


>gi|281354990|ref|ZP_06241484.1| pseudouridine synthase [Victivallis vadensis ATCC BAA-548]
 gi|281317870|gb|EFB01890.1| pseudouridine synthase [Victivallis vadensis ATCC BAA-548]
          Length = 241

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L+ ++  AG A S   A   +K+  + +N   +     ++   D
Sbjct: 9   LVKILSAAGIA-SRRGAGDLIKAGRVTVNGETVFEPGFRVAPGD 51


>gi|115624417|ref|XP_001203101.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase
          (Tryptophan--tRNA ligase) (TrpRS), partial
          [Strongylocentrotus purpuratus]
 gi|115633394|ref|XP_001195761.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase
          (Tryptophan--tRNA ligase) (TrpRS), partial
          [Strongylocentrotus purpuratus]
          Length = 75

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 27 LDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
          LD+  ++     Y G   ++SS+H GHL   +
Sbjct: 42 LDLYEAKKPFFLYTGRGPSSSSMHVGHLIPFI 73


>gi|331268441|ref|YP_004394933.1| 30S ribosomal protein S4 [Clostridium botulinum BKT015925]
 gi|329124991|gb|AEB74936.1| ribosomal protein S4 [Clostridium botulinum BKT015925]
          Length = 206

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           M L  ++ + GF +S +EAR+ +      +N   +     ++   D  
Sbjct: 98  MRLDNVVYRLGFGSSRSEARQLVTHGHFLVNGKKVDIASFKVSAGDVI 145


>gi|291613261|ref|YP_003523418.1| ribosomal protein S4 [Sideroxydans lithotrophicus ES-1]
 gi|291583373|gb|ADE11031.1| ribosomal protein S4 [Sideroxydans lithotrophicus ES-1]
          Length = 209

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 21/36 (58%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GF  S +EAR+ ++ N+I +N   ++    Q++  D
Sbjct: 109 GFGASRSEARQVVRHNSILVNGKRVNIPSYQVRPGD 144


>gi|238879875|gb|EEQ43513.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 461

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFGKKN 410
            + ++ FA+S  +AR+ +    +K+N  +I +    ++  D        +  + GK  
Sbjct: 109 ALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGDVFSVDPEKVLFALGKTK 166


>gi|224418175|ref|ZP_03656181.1| putative ribosomal pseudouridine synthase [Helicobacter canadensis
           MIT 98-5491]
 gi|253827502|ref|ZP_04870387.1| pseudouridine synthase, Rsu [Helicobacter canadensis MIT 98-5491]
 gi|313141710|ref|ZP_07803903.1| RNA pseudouridine synthase [Helicobacter canadensis MIT 98-5491]
 gi|253510908|gb|EES89567.1| pseudouridine synthase, Rsu [Helicobacter canadensis MIT 98-5491]
 gi|313130741|gb|EFR48358.1| RNA pseudouridine synthase [Helicobacter canadensis MIT 98-5491]
          Length = 250

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 17/55 (30%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  EA + +K   + IN  II +   Q+                 KNH   ++ G
Sbjct: 14  SRREADQLIKEGKVSINKEIIKDFSYQV-----------------KNHTKVYVNG 51


>gi|167770840|ref|ZP_02442893.1| hypothetical protein ANACOL_02193 [Anaerotruncus colihominis DSM
           17241]
 gi|167666880|gb|EDS11010.1| hypothetical protein ANACOL_02193 [Anaerotruncus colihominis DSM
           17241]
          Length = 68

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 26/55 (47%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + L  L+  AG   +  +A+  +    +++N  + +    +I+  D  + G +++
Sbjct: 10  IKLDALLKFAGAVQTGGQAKEWITGGMVRVNGELCAMRGKKIRPGDLVNVGELEI 64


>gi|160896494|ref|YP_001562076.1| 30S ribosomal protein S4 [Delftia acidovorans SPH-1]
 gi|226697834|sp|A9BRX4|RS4_DELAS RecName: Full=30S ribosomal protein S4
 gi|160362078|gb|ABX33691.1| ribosomal protein S4 [Delftia acidovorans SPH-1]
          Length = 207

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 342 SKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            K + + G  LL+L+           GF ++ +EAR+ +   AI +N   ++     +K+
Sbjct: 81  DKKKGNTGANLLSLLESRLDNVVYRMGFGSTRSEARQLVSHKAITVNGQSVNIPSYMVKV 140

Query: 394 QD 395
            D
Sbjct: 141 GD 142


>gi|51245003|ref|YP_064887.1| 30S ribosomal protein S4 [Desulfotalea psychrophila LSv54]
 gi|61215518|sp|Q6AP44|RS4_DESPS RecName: Full=30S ribosomal protein S4
 gi|50876040|emb|CAG35880.1| probable 30S ribosomal protein S4 [Desulfotalea psychrophila LSv54]
          Length = 210

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 13/67 (19%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD-------------STG 400
             + +AGFA+S  +AR+ ++   I IN   +     Q+   D                  
Sbjct: 103 NAVFRAGFASSRTQARQIVRHKHILINGKRVDIPSYQVSEGDVISLREKSRANAGVVDNL 162

Query: 401 NIKLSFG 407
              +  G
Sbjct: 163 EAVVRRG 169


>gi|68476945|ref|XP_717450.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|68477136|ref|XP_717361.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|46439070|gb|EAK98392.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|46439163|gb|EAK98484.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
          Length = 461

 Score = 38.6 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFGKKN 410
            + ++ FA+S  +AR+ +    +K+N  +I +    ++  D        +  + GK  
Sbjct: 109 ALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGDVFSVDPEKVLFALGKTK 166


>gi|315125461|ref|YP_004067464.1| 16S rRNA pseudouridylate 516 synthase [Pseudoalteromonas sp.
           SM9913]
 gi|315013974|gb|ADT67312.1| 16S rRNA pseudouridylate 516 synthase [Pseudoalteromonas sp.
           SM9913]
          Length = 232

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGKKNHIICHLCG 418
            ++AR  +KS A  +N  +I+    Q+  QD        +    GK+  ++    G
Sbjct: 19  RSKARAAIKSQAATVNGEVITAFDFQVSQQDDVLFYDEPLVF-LGKRYFMLNKPVG 73


>gi|148642276|ref|YP_001272789.1| tryptophanyl-tRNA synthetase [Methanobrevibacter smithii ATCC
           35061]
 gi|148551293|gb|ABQ86421.1| tryptophanyl-tRNA synthetase, TrpS [Methanobrevibacter smithii ATCC
           35061]
          Length = 325

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 77/239 (32%), Gaps = 30/239 (12%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIG-YDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
            +RG I    +  +++ L ++    A +G    +   +H GH   +  L W Q  G    
Sbjct: 1   MKRGVIFGHRDFDKVNNLINKKEDFAVVGGMMPSGQ-MHIGHKMVVDQLKWYQDKGAMLS 59

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    S          +R M   +     +       +++I  G    +   +N    
Sbjct: 60  ILIADLESY--------AARDMSFEKARDIAVN---EYLTNYIALGLDLEE-DNVNVYLQ 107

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV-----E 186
             +    DL  +     + N +      ++     QS +       ++Q  D +     E
Sbjct: 108 SKNDTLRDLAFKASKKTNFNEL------KAIYGFTQSTNIAHIQAPLVQVADILLPQLEE 161

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLLTTASGTKMGKTL 241
                   + +G  DQ  +I    D+  +L          +     LT  SG KM  + 
Sbjct: 162 FGGPKRVVVPVG-VDQDPHIRLTRDIAHKLNDEYGFIPPSSTYHRFLTGLSGDKMSSSK 219


>gi|294785982|ref|ZP_06751269.1| tryptophan--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486319|gb|EFG33682.1| tryptophan--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 325

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 96/338 (28%), Gaps = 45/338 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    M     LQ   +     +    S+                 + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDN-YDGFYFIADYHSL-------------TSLTKA 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF-ES 158
           +   E    I   ++  G     + +        ++     L  + S  +   +L    S
Sbjct: 52  EILKENTYNIVLDYLAVGLDPNKSTIFLQS----NVPEHTELTWLLSNITPVGLLERGHS 107

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +   
Sbjct: 108 YKDKIAKGIPSNTGLLTYPVLMAADIL----IYDTDVVPVGKDQKQHLEMTRDIAMKFNQ 163

Query: 219 P---KLFALTSPLLTTA-------SGTKMGKTLSGAIWLNKEMTSPYNFWQYW------- 261
               + F L  P +           G KM K+ +  I +                     
Sbjct: 164 QYEVEFFKLPEPFILDDSAIVPGTDGQKMSKSYNNTINMFATKKKLKEQVMSIVTDSTPL 223

Query: 262 ---RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              +N D+     +A        +E+             AK  +   I        E  +
Sbjct: 224 EEPKNPDNNISKIYALFNNIDKQNELKDKFLAGNFGYGHAKTELLNSILEYFGKAREKRE 283

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
                ++     ++       +I+ +++ +   ++ L+
Sbjct: 284 ELEKDIDYVKDVLNEGSKKARAIAIEKIKKAKEIVGLV 321


>gi|270157887|ref|ZP_06186544.1| ribosomal protein S4 [Legionella longbeachae D-4968]
 gi|289163854|ref|YP_003453992.1| 30S ribosomal subunit protein S4 [Legionella longbeachae NSW150]
 gi|269989912|gb|EEZ96166.1| ribosomal protein S4 [Legionella longbeachae D-4968]
 gi|288857027|emb|CBJ10841.1| 30S ribosomal subunit protein S4 [Legionella longbeachae NSW150]
          Length = 206

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA++  EAR+ +   AI +N+ I++     IK  D  S
Sbjct: 106 GFASTRAEARQLVTHKAILVNDKIVNVPSYLIKPGDVIS 144


>gi|169823881|ref|YP_001691492.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 29328]
 gi|302379778|ref|ZP_07268262.1| ribosomal protein S4 [Finegoldia magna ACS-171-V-Col3]
 gi|303234754|ref|ZP_07321380.1| ribosomal protein S4 [Finegoldia magna BVS033A4]
 gi|226699066|sp|B0RZT8|RS4_FINM2 RecName: Full=30S ribosomal protein S4
 gi|167830686|dbj|BAG07602.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 29328]
 gi|302312366|gb|EFK94363.1| ribosomal protein S4 [Finegoldia magna ACS-171-V-Col3]
 gi|302494095|gb|EFL53875.1| ribosomal protein S4 [Finegoldia magna BVS033A4]
          Length = 198

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+++A FA+S  +AR+ +    I++N   +     Q+          
Sbjct: 94  NLVLRASFASSIRQARQMVSHGLIRVNGKKVDIPSFQVAEGSVIELKE 141


>gi|88704352|ref|ZP_01102066.1| 30S ribosomal protein S4 [Congregibacter litoralis KT71]
 gi|88701403|gb|EAQ98508.1| 30S ribosomal protein S4 [Congregibacter litoralis KT71]
          Length = 206

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+           GF ++ +EAR+ +   AI +N  +++    ++K  D  S  
Sbjct: 87  GENLLQLLESRLDNVVYRIGFGSTRSEARQLVAHKAILVNGKVVNIASYKVKAGDVVSLR 146

Query: 401 N 401
            
Sbjct: 147 E 147


>gi|323254500|gb|EGA38311.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
          Length = 289

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVSGDVVKVNGRLI 59


>gi|322615369|gb|EFY12289.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618430|gb|EFY15319.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622159|gb|EFY19009.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627229|gb|EFY24021.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631190|gb|EFY27954.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637592|gb|EFY34293.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642558|gb|EFY39155.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322643574|gb|EFY40129.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648310|gb|EFY44769.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654619|gb|EFY50939.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659579|gb|EFY55822.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662213|gb|EFY58429.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666043|gb|EFY62221.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672462|gb|EFY68573.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675891|gb|EFY71962.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680375|gb|EFY76413.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684730|gb|EFY80734.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195994|gb|EFZ81160.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197076|gb|EFZ82217.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202220|gb|EFZ87270.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206320|gb|EFZ91282.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213332|gb|EFZ98134.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215701|gb|EGA00445.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222124|gb|EGA06510.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226535|gb|EGA10741.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229161|gb|EGA13290.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236230|gb|EGA20306.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237651|gb|EGA21712.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241684|gb|EGA25713.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248169|gb|EGA32106.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323258439|gb|EGA42116.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259719|gb|EGA43353.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265992|gb|EGA49488.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270434|gb|EGA53882.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 289

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVSGDVVKVNGRLI 59


>gi|302388739|ref|YP_003824560.1| SSU ribosomal protein S4P [Thermosediminibacter oceani DSM 16646]
 gi|302199367|gb|ADL06937.1| SSU ribosomal protein S4P [Thermosediminibacter oceani DSM 16646]
          Length = 208

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  +AR+ ++   I++N   ++    Q++ +D  +  
Sbjct: 89  GENLLRLLECRLDNVVYRLGFAKSRAQARQIVRHGHIEVNGRKVTIPSYQVREKDVIAVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|262201712|ref|YP_003272920.1| tryptophanyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085059|gb|ACY21027.1| tryptophanyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 347

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 68/241 (28%), Gaps = 31/241 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                 G   T+ S H G+    +     LQ+        +    +             +
Sbjct: 14  PRRVLSGIQPTSDSFHLGNYLGAVRQWVELQE-DFDTFYFIPDMHA-------------I 59

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
               +  +  E+ +   +  +  G   + A +          +   +L  I  F    RM
Sbjct: 60  TVPHDPAQLRERTRVSVAQLLAVGVDPSRATIYVQSHVPEIAQLTWVLSCITGFGEAGRM 119

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+  +S  +   +     F Y IL A D +             G DQ  ++    DL 
Sbjct: 120 TQFKD-KSAKQGVDAAGVGLFTYPILMAADILAFQ----VDRVPVGEDQRQHLELTRDLA 174

Query: 214 ERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           +R      K F +    +               KM K+      L   +  P    +  R
Sbjct: 175 QRFNKRFGKAFRVPEAFIVKEFAKIYDLQNPTAKMSKSADTDKGLINLLDDPKRSAKKIR 234

Query: 263 N 263
           +
Sbjct: 235 S 235


>gi|320451274|ref|YP_004203370.1| 30S ribosomal protein S4 [Thermus scotoductus SA-01]
 gi|320151443|gb|ADW22821.1| 30S ribosomal protein S4 [Thermus scotoductus SA-01]
          Length = 209

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++ + GFA S  +AR+ ++   I +N   +     ++K  D
Sbjct: 103 NVVYRLGFAASRRQARQMVRHGHITVNGRRVDLPAYRVKPGD 144


>gi|237804936|ref|YP_002889090.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273236|emb|CAX10149.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 346

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 97/308 (31%), Gaps = 47/308 (15%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESR 91
                  G   T   LH GH    +M    LQ  + +    ++    ++        ++R
Sbjct: 2   KKKRVLTGDRPTGK-LHLGHWIGSIMNRLQLQNDSRYDCFFIIADLHTL------TTKTR 54

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +     EI +    I  + + ++  G     + +          +  +L         +N
Sbjct: 55  KE----EILQIDNHIYDVLADWLSVGIDPEKSAIYLQSAI---PEIYELNLIFSMLTPLN 107

Query: 152 RMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            ++      E  R+    E+SLS     Y +LQ+ D +         L   G D   ++ 
Sbjct: 108 HIMGIPSIKEMARNASLNEESLSHGLIGYPVLQSADIL----LAKAHLVPVGKDNEAHVE 163

Query: 208 CGIDLGERLK--TPKLF-------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
              D+ +       ++F          + L+ T    KM K+ + AI+L+ +  +     
Sbjct: 164 LTRDIAKTFNRLYGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKI 223

Query: 259 QYWR------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIAT 304
           +                ++   +  +            +   + +   I   E K  +A 
Sbjct: 224 RKLYTDPNRIHATTPGRVEGNPLFIYHDLFNPHKEEVEEFKTRYRQGCIRDVEVKARLAE 283

Query: 305 EITTMVHG 312
           EI   ++ 
Sbjct: 284 EINLFLNP 291


>gi|150392132|ref|YP_001322181.1| ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
 gi|171460826|sp|A6TWF4|RS4A_ALKMQ RecName: Full=30S ribosomal protein S4 A
 gi|149951994|gb|ABR50522.1| ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
          Length = 207

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L+ + G A+S  EAR+ +      +N   +      +K  D
Sbjct: 102 NLVYRLGLASSRAEARQLVVHGHFTVNGGKVDIPSYLVKAGD 143


>gi|292492445|ref|YP_003527884.1| ribosomal protein S4 [Nitrosococcus halophilus Nc4]
 gi|291581040|gb|ADE15497.1| ribosomal protein S4 [Nitrosococcus halophilus Nc4]
          Length = 208

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S G  LL L+           GF ++  EAR+ +    I +N  +I+    QI+ +D  S
Sbjct: 87  STGENLLKLLESRLDNVVYRMGFGSTRAEARQLISHKGILVNGKVINVPSYQIRAEDVVS 146

Query: 399 TGN 401
              
Sbjct: 147 VRE 149


>gi|288802331|ref|ZP_06407771.1| ribosomal large subunit pseudouridine synthase D [Prevotella
           melaninogenica D18]
 gi|288335298|gb|EFC73733.1| ribosomal large subunit pseudouridine synthase D [Prevotella
           melaninogenica D18]
          Length = 296

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +V+    LL  ++ A    S ++ +  L++  IK+N   ++     +K  D  S     +
Sbjct: 16  KVTAPAPLLEWLL-ANLNESKSKVKATLQNRGIKVNGKCVTQFDHPLKAGDKIS-----V 69

Query: 405 SFGKKN 410
           S  KKN
Sbjct: 70  SKSKKN 75


>gi|284928717|ref|YP_003421239.1| hemolysin A [cyanobacterium UCYN-A]
 gi|284809176|gb|ADB94881.1| hemolysin A [cyanobacterium UCYN-A]
          Length = 264

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN---IKLSFGKK 409
           L+V+    TS  +A+R +++  +KIN  II     +I ++               GKK
Sbjct: 8   LLVEKNLYTSRQQAQRCIRAGEVKINQRIIDKPGTEINIKAEIEVKIKPPYVSRGGKK 65


>gi|223936404|ref|ZP_03628316.1| ribosomal protein S4 [bacterium Ellin514]
 gi|223894922|gb|EEF61371.1| ribosomal protein S4 [bacterium Ellin514]
          Length = 202

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 23/53 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            ++   GFA +   AR+ +    +++N   ++     +K+ D     +  +S 
Sbjct: 96  NVVFHLGFANTRAAARQLVSHGHVRVNGRKVNIPSFALKVNDVIEAKDSNVSR 148


>gi|154490383|ref|ZP_02030644.1| hypothetical protein PARMER_00616 [Parabacteroides merdae ATCC
           43184]
 gi|154088994|gb|EDN88038.1| hypothetical protein PARMER_00616 [Parabacteroides merdae ATCC
           43184]
          Length = 204

 Score = 38.6 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            LI  +G   S  EA + ++   + +N S +     ++   D     +I++  GK
Sbjct: 10  KLISDSGLC-SRREADKFIEEGRVTVNGS-LPQVGQKVTEADIVMLDDIQIKIGK 62


>gi|312143949|ref|YP_003995395.1| tryptophanyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904600|gb|ADQ15041.1| tryptophanyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 334

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 103/348 (29%), Gaps = 48/348 (13%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDES 90
           ++       G   T   LH GH    +     LQ+  +    ++    ++          
Sbjct: 3   NKEKERILTGDRPTGK-LHLGHYVGSLQNRVELQEE-YDTFLIIADVQAL---------- 50

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                 ++ ++  E ++ +   ++  G       +          +  +L        +V
Sbjct: 51  --TTNFEQPEKLGEDVRQVARDYLAAGIDPEKTTIFVQS---MVPEIAELTIFFSMLVTV 105

Query: 151 NRMLSFESVRSRLKR--EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           N++    +++S   +   + +S+    Y + QA D           L   G DQ  +I  
Sbjct: 106 NQLRHNPTIKSEADQYGYKEMSYGFLGYPVSQAADI----SFCRANLVPVGEDQIPHIEQ 161

Query: 209 GIDLGERLKT---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
              +  +              L +    L+     +KM K+L+ AI+L+  +        
Sbjct: 162 TRKIVRKFNNLYGEVFPEPKALISDFPRLMGLDGKSKMSKSLNNAIYLSDSVEEVNKKIM 221

Query: 260 YWR------------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA---T 304
             +            + +   V  + +        EI    +         KK +A    
Sbjct: 222 QAKTDPARIHKDDPGHPEVCTVFHYHEAFNKEESGEIASRCRAGTIGCVACKKRMAKKLN 281

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           E    +  R +        +E        +     +I+  +V   M +
Sbjct: 282 EFLDPMRERRKKYLENPELIEEIIQKGTKRARKEAAITLKKVREVMKI 329


>gi|255016945|ref|ZP_05289071.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 286

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   ++    +    + I  P  R + R  
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITVPQDRLKLR-- 56

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                     E+ + + + ++  G     + +          +   +L+       + RM
Sbjct: 57  ----------EQTRSLAALYLAVGLDPEKSTLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSAGKAGVSAGLLTYPPLMAADIL----LYQTDLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|302346727|ref|YP_003815025.1| pseudouridine synthase, RluA family [Prevotella melaninogenica ATCC
           25845]
 gi|302151131|gb|ADK97392.1| pseudouridine synthase, RluA family [Prevotella melaninogenica ATCC
           25845]
          Length = 296

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +V+    LL  ++ A    S ++ +  L++  IK+N   ++     +K  D  S     +
Sbjct: 16  KVTAPAPLLEWLL-ANLNESKSKVKATLQNRGIKVNGKCVTQFDHPLKAGDKIS-----V 69

Query: 405 SFGKKN 410
           S  KKN
Sbjct: 70  SKSKKN 75


>gi|226326148|ref|ZP_03801666.1| hypothetical protein COPCOM_03967 [Coprococcus comes ATCC 27758]
 gi|225205690|gb|EEG88044.1| hypothetical protein COPCOM_03967 [Coprococcus comes ATCC 27758]
          Length = 81

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + L   +  AG   S  EA+  +    +K+N  +
Sbjct: 23  IKLGQALKAAGLVGSGVEAKEVITEGLVKVNGEV 56


>gi|206901970|ref|YP_002251612.1| ribosomal small subunit pseudouridine synthase A [Dictyoglomus
           thermophilum H-6-12]
 gi|206741073|gb|ACI20131.1| ribosomal small subunit pseudouridine synthase A [Dictyoglomus
           thermophilum H-6-12]
          Length = 242

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M L   +V  GF  S  E ++ +K+  + +N+  + +    I   
Sbjct: 1   MRLDKFLVNQGF-GSRKEVQKLIKAGIVYVNDVPVKDPSFHIDPN 44


>gi|110803415|ref|YP_699574.1| ribosomal large subunit pseudouridine synthase f [Clostridium
           perfringens SM101]
 gi|110683916|gb|ABG87286.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           SM101]
          Length = 298

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII-SNEKLQIKLQDFDSTG 400
           +K+E+   + L   I + GF  S  EA + ++   +KI+     +  K+      F    
Sbjct: 52  NKNEIRDEVRLNKYISETGFC-SRREADKLIEQGRVKIDGVKATTGMKVSKGQSVFIDGK 110

Query: 401 NIKL 404
            +K+
Sbjct: 111 PLKV 114


>gi|256832053|ref|YP_003160780.1| tryptophanyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256685584|gb|ACV08477.1| tryptophanyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 341

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 29/204 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSI-IG-DPSFRDESRRMMRS 96
           G   T  SL  G+    M   W  LQ        ++    ++ +  DP  +   R     
Sbjct: 13  GMQPTNDSLSIGNYIGAMT-QWVSLQD-DFDAFYMVADLHALTVNPDP-DKLRERTRRT- 68

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                         + ++  G     + +          +   LL     F  ++RM  F
Sbjct: 69  -------------LAQYLAGGVDPERSTLFLQSHVPAHAELSWLLSCHTGFGELSRMTQF 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +  ++  +  ++ +   F+Y +L A D +     YD      G DQ  ++    +L ER+
Sbjct: 116 KD-KAAKQGTETATAGLFSYPVLMAADIL----LYDAARVPVGEDQRQHLELTRNLAERM 170

Query: 217 ---KTPKLFALTSPLLTTASGTKM 237
                   F +  P +  A     
Sbjct: 171 NSRYGADTFVVPEPHIVKAVAKIY 194


>gi|237755405|ref|ZP_04584032.1| ribosomal large subunit pseudouridine synthase B
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692446|gb|EEP61427.1| ribosomal large subunit pseudouridine synthase B
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 244

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLS-FGKKNHII 413
           I ++G   S  +A   +K   +K+N  II +   +I  + D        +    KK +I 
Sbjct: 9   IAQSGIC-SRRKADELIKEGIVKVNGEIIKDLGAKINPEKDVVEVEGNIIKPVEKKIYIK 67

Query: 414 C 414
            
Sbjct: 68  I 68


>gi|238855582|ref|ZP_04645884.1| tryptophan-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664774|ref|ZP_05865625.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932732|ref|ZP_06338140.1| tryptophan--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238831799|gb|EEQ24134.1| tryptophan-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561257|gb|EEX27230.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303142|gb|EFA95336.1| tryptophan--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 341

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 47/173 (27%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++       D +R   + +    
Sbjct: 12  PTGR-LHIGHYIGSLKNRVILQNEGKYDPYIMIADTQAL------TDNARNPEKIRNSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    L     +    N  +  E  + 
Sbjct: 65  EVALDY----LAVGIDPEKSTIFVQSQIPALFELTAYYLDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                    F    Y + QA D           L   G DQ   +    ++  
Sbjct: 121 NFNESIPAGF--LTYPVSQAADITAFK----ATLIPVGDDQEPMMEQTREIVR 167


>gi|50261300|ref|YP_052908.1| ribosomal protein S4 [Saprolegnia ferax]
 gi|48237613|gb|AAT40662.1| ribosomal protein S4 [Saprolegnia ferax]
          Length = 266

 Score = 38.6 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 27/50 (54%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +I ++  A +  EA++ +    IK+NN II++    +K  D  +  N K+
Sbjct: 148 IIFRSKIAKTIFEAKQIINHGKIKVNNKIITSSNYILKRGDIITLNNFKI 197


>gi|253995743|ref|YP_003047807.1| 30S ribosomal protein S4 [Methylotenera mobilis JLW8]
 gi|253982422|gb|ACT47280.1| ribosomal protein S4 [Methylotenera mobilis JLW8]
          Length = 209

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G  LL L+         + G   S  EAR+ ++ N+I +N   ++    Q+K  D  S
Sbjct: 90  GENLLQLLECRLDNVTYRMGLGGSRTEARQIVRHNSILVNGKRVNIPSYQVKAGDVIS 147


>gi|312793399|ref|YP_004026322.1| pseudouridine synthase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312877026|ref|ZP_07736999.1| pseudouridine synthase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796167|gb|EFR12523.1| pseudouridine synthase [Caldicellulosiruptor lactoaceticus 6A]
 gi|312180539|gb|ADQ40709.1| pseudouridine synthase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 232

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   +   GF  S ++ ++ ++   + +N   I     +I  ++
Sbjct: 1   MRLDKFLTHCGF-GSRSQVKKLIREGIVTVNGKRIVEVDFKINPEE 45


>gi|256830514|ref|YP_003159242.1| 30S riboosomal protein S4 [Desulfomicrobium baculatum DSM 4028]
 gi|256579690|gb|ACU90826.1| ribosomal protein S4 [Desulfomicrobium baculatum DSM 4028]
          Length = 208

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 7/140 (5%)

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           +  T     E    A     +  +     A ++      R+            F+ +   
Sbjct: 25  RCYTDKCAFERRAYAPGDHGKARKKPSDYALQLREKQKVRKMYGILEGQFRRYFEEAERR 84

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + +   ++    +     +  +  K GFA S ++AR+ ++     +N   ++   +Q+K 
Sbjct: 85  KGITGTNL---LMLLETRIDNVAYKLGFANSRSQARQMVRHGLFSLNGRRVNVPSIQMKS 141

Query: 394 QDFDSTGNIKLSFGKKNHII 413
            D     +      KKN +I
Sbjct: 142 GDVLEVRDRT----KKNLVI 157


>gi|329889172|ref|ZP_08267515.1| ribosomal large subunit pseudouridine synthase F [Brevundimonas
           diminuta ATCC 11568]
 gi|328844473|gb|EGF94037.1| ribosomal large subunit pseudouridine synthase F [Brevundimonas
           diminuta ATCC 11568]
          Length = 252

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGN 401
           +    + +   + ++G   S  EA   +    + I+  ++ +   +I+       + TG 
Sbjct: 8   DGPEPVRINKWLGQSGVC-SRREAEGLIADGLVSIDGEVVRDAGRKIEPGQTLTLNDTGE 66

Query: 402 IKLSFG 407
             L+ G
Sbjct: 67  AALAAG 72


>gi|317492565|ref|ZP_07950992.1| tRNA synthetase class I [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919315|gb|EFV40647.1| tRNA synthetase class I [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 338

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 51/175 (29%), Gaps = 19/175 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ   +    L+     +         +      Q+I +N
Sbjct: 16  PTGP-LHLGHYVGSLRQRVTLQDR-YPQYVLIADLQGL---------TDNGSNPQKISQN 64

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           I ++       +     KT   + +    L  +  + +     +    N  +  E  +  
Sbjct: 65  IFEVMA-DYLAVGIDPAKTTICLQSALPALAELTMLYMNIVTVARVERNPTVKAEIAQKG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             R     F    Y I QA D      +        G DQ   +    ++  ++ 
Sbjct: 124 FSRSLPTGF--LVYPISQAADITAFKADR----VPVGDDQLPMLEQTNEIVHKMN 172


>gi|241958516|ref|XP_002421977.1| mitochondrial ribosome protein precursor, small subunit [Candida
           dubliniensis CD36]
 gi|223645322|emb|CAX39978.1| mitochondrial ribosome protein precursor, small subunit [Candida
           dubliniensis CD36]
          Length = 461

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFGKKN 410
            + ++ FA+S  +AR+ +    +K+N  +I +    ++  D        +  + GK  
Sbjct: 109 ALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGDVFSVDPEKVLFALGKTK 166


>gi|282878147|ref|ZP_06286944.1| pseudouridylate synthase [Prevotella buccalis ATCC 35310]
 gi|281299725|gb|EFA92097.1| pseudouridylate synthase [Prevotella buccalis ATCC 35310]
          Length = 488

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI--KLQDFDSTGNIKLSF 406
            + L   +  AG   S  EA   +++  +K+N  +++    ++    +       + L  
Sbjct: 252 PVRLNKFLANAGVC-SRREADEFIQAGVVKVNGEVVTELGTKVMRTDEVVFHDQPVSLE- 309

Query: 407 GKKNHIICH 415
            KK +++ +
Sbjct: 310 -KKVYVLLN 317


>gi|225849518|ref|YP_002729683.1| 30S ribosomal protein S4 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644198|gb|ACN99248.1| ribosomal protein S4 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 204

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             SK   + G+ LL L+ +         GFA +  +AR+ +K     +N   +     ++
Sbjct: 76  EASKKAGNTGVVLLQLLERRLDNVVYRLGFAKTRQQARQLVKHGHFTVNGKKVDIPSYRV 135

Query: 392 KLQDFDSTGN 401
              D      
Sbjct: 136 DAGDIIEVRE 145


>gi|146296790|ref|YP_001180561.1| pseudouridine synthase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410366|gb|ABP67370.1| ribosomal small subunit pseudouridine synthase A
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 232

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 7/58 (12%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           M L   +  +GF  + +E +R +K   +K+N     +  L+I            +  G
Sbjct: 1   MRLDRFLAHSGF-GTRSEVKRLIKKGLVKVNGKQAKSPDLKIDEDKD------VVQVG 51


>gi|332185277|ref|ZP_08387026.1| hypothetical protein SUS17_350 [Sphingomonas sp. S17]
 gi|332015001|gb|EGI57057.1| hypothetical protein SUS17_350 [Sphingomonas sp. S17]
          Length = 420

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  L+ +AG   S  E  R +    I +N + I      +   D
Sbjct: 7   IAKLLARAG-VASRREVERMIAEGRIALNGTTIDTPATLLSSLD 49


>gi|239617854|ref|YP_002941176.1| pseudouridine synthase [Kosmotoga olearia TBF 19.5.1]
 gi|239506685|gb|ACR80172.1| pseudouridine synthase [Kosmotoga olearia TBF 19.5.1]
          Length = 235

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIK 403
           S  ++R+ +K+  +++N + I N + +I      F     I 
Sbjct: 14  SRRQSRKLIKTGRVEVNGAKIRNPEFKIPENSSIFLDGNRIV 55


>gi|50425337|ref|XP_461262.1| DEHA2F20988p [Debaryomyces hansenii CBS767]
 gi|49656931|emb|CAG89651.1| DEHA2F20988p [Debaryomyces hansenii]
          Length = 467

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            + +A FA+S  +AR+ +    +K+N  ++ +    ++  D  +  
Sbjct: 108 ALFRAMFASSVRQARQFILGGHVKVNGVVVKHPSFPLQSGDVFNVK 153


>gi|67926067|ref|ZP_00519319.1| Hemolysin A [Crocosphaera watsonii WH 8501]
 gi|67852087|gb|EAM47594.1| Hemolysin A [Crocosphaera watsonii WH 8501]
          Length = 270

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNE--KLQIKLQDFDSTGNIKLSFG 407
           L+VK    +S  +A+R +++  +K+N  II     +++I            +S G
Sbjct: 9   LLVKRDLCSSRQQAQRCIRAGEVKVNQRIIDKPGTEVEITADIELKAKPPYVSRG 63


>gi|255325778|ref|ZP_05366872.1| S4 domain protein [Corynebacterium tuberculostearicum SK141]
 gi|311741152|ref|ZP_07714977.1| RNA-binding S4 [Corynebacterium pseudogenitalium ATCC 33035]
 gi|255297189|gb|EET76512.1| S4 domain protein [Corynebacterium tuberculostearicum SK141]
 gi|311303954|gb|EFQ80032.1| RNA-binding S4 [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 94

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 15/49 (30%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              + L   I  A    +  EA+  +    + +N    +     +   D
Sbjct: 8   GDSIKLGQFIKLASLVATGGEAKELIAEGVVTVNGEPETRRGAMLHPGD 56


>gi|225549334|ref|ZP_03770307.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370192|gb|EEG99632.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 352

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 73/221 (33%), Gaps = 30/221 (13%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS----------INT 58

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               ++ +   ++  G       +          +   +   I +   + R+ S + +  
Sbjct: 59  IPSNVREMVLDYLACGINPDKVSIYLQSAIPELFELHLIFSMIVTVARLQRIPSIKDMSI 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
               ++ +++    Y +L + D +         L   G D   +I    +L  R      
Sbjct: 119 AAGLKE-ITYGLLGYPVLMSADILMTK----ANLVPVGRDNESHIEFARELARRFNHLYK 173

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                    +F  + PL+      KM K+L+ AI+LN +  
Sbjct: 174 NNFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDDEN 214


>gi|54022069|ref|YP_116311.1| hypothetical protein nfa1050 [Nocardia farcinica IFM 10152]
 gi|54013577|dbj|BAD54947.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 73

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 24/57 (42%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           + L   +  A    S +EA+  + +  +++N+ +      Q+++ D       K+  
Sbjct: 14  IKLGQFLKLANLIDSGSEAKTVIAAGLVRVNDEVELRRGRQLQVGDVVILAGHKVRV 70


>gi|310642769|ref|YP_003947527.1| 30S ribosomal protein s4 [Paenibacillus polymyxa SC2]
 gi|309247719|gb|ADO57286.1| 30S ribosomal protein S4 [Paenibacillus polymyxa SC2]
          Length = 199

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/124 (9%), Positives = 30/124 (24%), Gaps = 11/124 (8%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
             P        +       + ++         +  ++       A         +   + 
Sbjct: 30  FPPGQHGANQRRKISNYGMQLQEKQKLRHMYGLGEKQFRTLFNKAQHMHGIAGENFMFLL 89

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
              +             L+ + GFA S   AR+ +    + +N   +     Q+   D  
Sbjct: 90  ESRLD-----------NLVFRLGFANSRAGARQLVAHGHVTVNGKKVDIASYQVSPGDVI 138

Query: 398 STGN 401
               
Sbjct: 139 GLRE 142


>gi|189461637|ref|ZP_03010422.1| hypothetical protein BACCOP_02296 [Bacteroides coprocola DSM 17136]
 gi|189431667|gb|EDV00652.1| hypothetical protein BACCOP_02296 [Bacteroides coprocola DSM 17136]
          Length = 364

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 69/235 (29%), Gaps = 32/235 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K       G ++         +  +   ++++
Sbjct: 13  PTGK-LHIGHYVGSLRRRVELQNSGLYDKIFVFEADGQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLAAGLDPAKSTIFIQSQIPELCELSFYFMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADIAAFK----ATTVPVGEDQEPMIEQTREIVRRFNHIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              L  P +             T    KM K+L   I+L+          +    
Sbjct: 176 GETLVEPEILLPDNAACMRLPGTDGKAKMSKSLGNCIYLSDSADEVEKKVKSMYT 230


>gi|83648828|ref|YP_437263.1| ribosomal protein S4 [Hahella chejuensis KCTC 2396]
 gi|123530606|sp|Q2S936|RS4_HAHCH RecName: Full=30S ribosomal protein S4
 gi|83636871|gb|ABC32838.1| ribosomal protein S4 [Hahella chejuensis KCTC 2396]
          Length = 206

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 15/85 (17%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GF ++ +EAR+ +   AI +N   ++    Q+
Sbjct: 78  EAARIKGATGENLLQLLERRLDNVVYRMGFGSTRSEARQLVSHKAILVNGKAVNIPSYQV 137

Query: 392 KLQDFDSTGNIKLSFGK-KNHIICH 415
           K  D  S         K KN +   
Sbjct: 138 KPGDVVSIRE------KSKNQLRIK 156


>gi|260437691|ref|ZP_05791507.1| conserved domain protein [Butyrivibrio crossotus DSM 2876]
 gi|292809917|gb|EFF69122.1| conserved domain protein [Butyrivibrio crossotus DSM 2876]
          Length = 69

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKL 404
              + L   +  A   +S  EA+  +    +K+N         +++  D    +   IK+
Sbjct: 8   EEFIKLGQALKAANLVSSGVEAKDVILEGMVKVNGEKEYQRGKKLRAGDIVSFNGEEIKI 67


>gi|124267384|ref|YP_001021388.1| hypothetical protein Mpe_A2197 [Methylibium petroleiphilum PM1]
 gi|124260159|gb|ABM95153.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 83

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 17/32 (53%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           + L  L+   G A S   A++ ++S  ++++ 
Sbjct: 18  ITLDALLKATGLADSGGAAKQLIQSGQVQVDG 49


>gi|332534329|ref|ZP_08410172.1| 16S rRNA pseudouridylate synthase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036239|gb|EGI72712.1| 16S rRNA pseudouridylate synthase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 232

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKNHIICHLCG 418
             +AR  +K   + +N  +I++   Q+  QD     G   +  GK+ +++    G
Sbjct: 19  RTQARASIKRKEVSVNGEVITSHNFQLAQQDEVLHQGTPLVFLGKRYYMLNKPVG 73


>gi|319940768|ref|ZP_08015108.1| tryptophanyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805788|gb|EFW02564.1| tryptophanyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 437

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 69/233 (29%), Gaps = 32/233 (13%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIG--DPSFRDE 89
                  G + T + LH G+    +   +   +    +    +    ++I   DP+  + 
Sbjct: 3   RKKRVLTGINTTGT-LHIGNYVGAIRPAIQDSRNPDVESFFFLADLHALIKCQDPTRIER 61

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           SR  + +  +   ++     F                    W+       + + + +   
Sbjct: 62  SRMQIAATWLAAGLDPDHVTFYRQSDIPEIPLLC-------WMFD---CVMSKGLLNRAH 111

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
             +     +  +    +  +S   F+Y +L A D +      +      G DQ  ++   
Sbjct: 112 AYKAAVDAATAAGRDPDADVSMGLFSYPVLMAADILMF----NADEVPVGHDQLQHLEMA 167

Query: 210 IDLGERLKT------PKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNK 249
            D   R            F +          +L    G KM K+ +  I L +
Sbjct: 168 RDAASRFNNLYCSPDKPFFVMPQATGGSALEVLPGLDGRKMSKSYNNVIPLFE 220


>gi|296242597|ref|YP_003650084.1| 30S ribosomal protein S4E [Thermosphaera aggregans DSM 11486]
 gi|296095181|gb|ADG91132.1| SSU ribosomal protein S4E [Thermosphaera aggregans DSM 11486]
          Length = 252

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 346 VSRGMGLLTLIVK--AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++R + LL LIV+     A +  EARR +     KI+  +  + K  + + D   
Sbjct: 39  IARSIPLL-LIVRDVLRLAKTGKEARRLISEGYFKIDGKVRRDYKFPVGMMDVIE 92


>gi|198274200|ref|ZP_03206732.1| hypothetical protein BACPLE_00340 [Bacteroides plebeius DSM 17135]
 gi|198272875|gb|EDY97144.1| hypothetical protein BACPLE_00340 [Bacteroides plebeius DSM 17135]
          Length = 364

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 67/225 (29%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K       G ++         +  +   ++++
Sbjct: 13  PTGK-LHIGHYVGSLRRRVELQNSGLYDKIFVFEADGQAL---------TDNIENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +          K+   + +    L  + +  +     S    N  +  E   
Sbjct: 63  QNVIEV-ALDYLAAGLDPAKSTIFIQSQIPELYELSFYFMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   I    ++  R     
Sbjct: 122 RNFETSIPVGF--FTYPISQAADIAAFK----ATTVPVGEDQEPMIEQTREIVRRFNHIY 175

Query: 221 LFALTSPLLT------------TASGTKMGKTLSGAIWLNKEMTS 253
              L  P +             T    KM K+L   I+L+     
Sbjct: 176 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADE 220


>gi|149239088|ref|XP_001525420.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450913|gb|EDK45169.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 460

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 1/117 (0%)

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           P+  + +    Q        +    E       ++             D S+  + +   
Sbjct: 33  PIDYVGKTMYQQKWTAKSETRAYHGEHLKEKRFKKVLFDPELKTYSQLDASLKGEAVAPT 92

Query: 340 SISKDEVSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            I+    +     L   V ++ FA+S  +AR+ +    +K+N   I +    +K  D
Sbjct: 93  PITLQTYAALEKRLEFAVFRSMFASSVRQARQFILGGFVKVNGVKIRHPSFPLKSGD 149


>gi|147676683|ref|YP_001210898.1| 30S ribosomal protein S4 [Pelotomaculum thermopropionicum SI]
 gi|189045389|sp|A5D5E8|RS4_PELTS RecName: Full=30S ribosomal protein S4
 gi|146272780|dbj|BAF58529.1| ribosomal protein S4 and related proteins [Pelotomaculum
           thermopropionicum SI]
          Length = 208

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +I + G   S NEAR+ ++     +N   ++     +K  D  
Sbjct: 102 NVIYRLGLGASRNEARQLVRHGHFTVNGRRVNIPSYLVKPGDVI 145


>gi|309389907|gb|ADO77787.1| SSU ribosomal protein S4P [Halanaerobium praevalens DSM 2228]
          Length = 208

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           GFA+S NEAR+ +    I +N   +     QI + D     
Sbjct: 108 GFASSRNEARQFVLHGHITVNGRKVDIPSYQIDIDDEIKVK 148


>gi|308069706|ref|YP_003871311.1| 30S ribosomal protein S4 [Paenibacillus polymyxa E681]
 gi|305858985|gb|ADM70773.1| 30S ribosomal protein S4 [Paenibacillus polymyxa E681]
          Length = 199

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/124 (9%), Positives = 30/124 (24%), Gaps = 11/124 (8%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
             P        +       + ++         +  ++       A         +   + 
Sbjct: 30  FPPGQHGANQRRKISNYGMQLQEKQKLRHMYGLGEKQFRTLFNKAQHMHGIAGENFMFLL 89

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
              +             L+ + GFA S   AR+ +    + +N   +     Q+   D  
Sbjct: 90  ESRLD-----------NLVFRLGFANSRAGARQLVAHGHVTVNGKKVDIASYQVSPGDVI 138

Query: 398 STGN 401
               
Sbjct: 139 GLRE 142


>gi|118444508|ref|YP_877226.1| 30S ribosomal protein S4 [Clostridium novyi NT]
 gi|152060917|sp|A0PXX4|RS4A_CLONN RecName: Full=30S ribosomal protein S4 A
 gi|118134964|gb|ABK62008.1| ribosomal protein S4 [Clostridium novyi NT]
          Length = 206

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         K GF +S  EAR+ +      +N   +     Q+   D  S  
Sbjct: 89  GENLLKLLEMRLDNVVYKLGFGSSRAEARQLVTHGHFLVNGKKVDIISYQVSAGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|73670608|ref|YP_306623.1| FtsJ-like methyltransferase [Methanosarcina barkeri str. Fusaro]
 gi|72397770|gb|AAZ72043.1| FtsJ-like methyltransferase [Methanosarcina barkeri str. Fusaro]
          Length = 236

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 8/59 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS--------TGNIKLSF 406
           IV  G   S   A++ + +  +K+N ++I+     +   D            G  KL  
Sbjct: 7   IVDMGHFKSRGRAKKAILAGNVKVNGAVITKASRDVSTDDIIEVTEGLDQPQGYFKLKL 65


>gi|242223228|ref|XP_002477270.1| predicted protein [Postia placenta Mad-698-R]
 gi|220723290|gb|EED77530.1| predicted protein [Postia placenta Mad-698-R]
          Length = 345

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
            AA    +           P  S+   EV R + +  L+ +A FA S  EARR +    +
Sbjct: 105 DAAQKEAKRLQNEREKGLAPVGSLMFREVERRIDV--LLFRACFAHSVYEARRMVVHGDV 162

Query: 378 KINNSIISNEKLQIKLQDFDS 398
            +N    +N   ++   D  S
Sbjct: 163 LLNGKKHTNPNTRLAPGDMFS 183


>gi|313206753|ref|YP_004045930.1| tryptophanyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312446069|gb|ADQ82424.1| tryptophanyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023825|gb|EFT36827.1| tryptophanyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335808|gb|ADZ12082.1| Tryptophanyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 322

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 17/254 (6%)

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           +    I ++++ +G                  +  +L   +  FF   R+    S + + 
Sbjct: 58  QNTYEIAAAWLAFGLDTEKTYFYRQSDI---PEVCELSWYLSCFFPYQRLTLAHSFKDKA 114

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
            R   ++   F Y +L A D +     YD  +   G DQ  ++    D+G R        
Sbjct: 115 DRLADVNAGLFTYPVLMAADIL----LYDAEIVPVGKDQLQHLEMARDMGARFNNQMGET 170

Query: 224 LTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
              P          +    G KM K+    I +                 D   +     
Sbjct: 171 FVLPQEELQENTKYVPGTDGNKMSKSRGNIINIFLPEKQLKKQVMSIE-TDSKTLEEPKD 229

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             T    +  + +A  +  E    K +                   T + E    + +  
Sbjct: 230 PETDKVFALYELIATPEQTEQLRQKYLAGNFGYGHAKTELLNLILETYSKERELFNYYMT 289

Query: 335 HMPTISISKDEVSR 348
           H+  +     E + 
Sbjct: 290 HLDELEAKLKEGAE 303


>gi|296328109|ref|ZP_06870642.1| tryptophan--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154780|gb|EFG95564.1| tryptophan--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 325

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 99/338 (29%), Gaps = 45/338 (13%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    M     LQ + +     +    S+                 + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDS-YDGFYFIADYHSL-------------TSLTKA 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF-ES 158
           +   E    I   ++  G   + + +        ++     L  + S  +   +L    S
Sbjct: 52  ETLKENTYNIVLDYLAVGLDPSKSTIFLQS----NVPEHTELTWLLSNITPVGLLERGHS 107

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +   
Sbjct: 108 YKDKIAKGIPSNTGLLTYPVLMAADIL----IYDSDVVPVGKDQKQHLEMTRDIAMKFNQ 163

Query: 219 P---KLFALTSPLLTTA-------SGTKMGKTLSGAIWLNKEMTSPYNFWQYW------- 261
               + F L  PL+           G KM K+ +  I +                     
Sbjct: 164 QYGVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFATKKKLKEQVMSIVTDSTPL 223

Query: 262 ---RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              +N D+     +A        +E+             AK  +   I        E  +
Sbjct: 224 EEPKNPDNNITKIYALFNNIDKQNELKDKFLAGNFGYGHAKTELLNSILEYFGTAREKRE 283

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
                M+     ++       +I+ +++ +   ++ L+
Sbjct: 284 ELEKNMDYVKDVLNEGSKKARTIAIEKIKKAKEIVGLV 321


>gi|83591991|ref|YP_425743.1| pseudouridine synthase, Rsu [Rhodospirillum rubrum ATCC 11170]
 gi|83574905|gb|ABC21456.1| Pseudouridine synthase, Rsu [Rhodospirillum rubrum ATCC 11170]
          Length = 293

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +  +I +AG   S  +A + +    + +N   +      +   D
Sbjct: 3   GDSERIAKVIARAGIC-SRRDAEKLIVEGRVTLNGRKVETPATLVAASD 50


>gi|28377337|ref|NP_784229.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum WCFS1]
 gi|28270169|emb|CAD63068.1| tryptophan--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 338

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 54/184 (29%), Gaps = 25/184 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSI---IGDPSFRDESRRMMRSQE 98
            T   LH GH    +     LQ +G +    ++    ++     DP   ++ R+ +    
Sbjct: 12  PTGK-LHIGHYVGSLRNRVALQDSGDYDSYIMIADNQALTDNAHDP---EKIRKSLLQVA 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +      I    S+ +          M+N                + +   +NR  + ++
Sbjct: 68  MDYLAVGIDPQKSTILVQSQIPALTDMMNQY------------LNLVTVARLNRNPTVKT 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +    +S+    F Y + QA D               G DQ   +    ++      
Sbjct: 116 EIKQKAFGESVPAGFFVYPVSQAADITAFK----ATTVPVGDDQEPMLEQTREIVRSFNK 171

Query: 219 PKLF 222
               
Sbjct: 172 TYQT 175


>gi|327399594|ref|YP_004340463.1| hemolysin A [Hippea maritima DSM 10411]
 gi|327182223|gb|AEA34404.1| hemolysin A [Hippea maritima DSM 10411]
          Length = 236

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 353 LTL-IVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           L L +V+ GF  + + A++ ++   ++I+  +I+    
Sbjct: 3   LDLFLVENGFVETRSRAKQIIEEGGVRISEKVITKPSF 40


>gi|262066090|ref|ZP_06025702.1| tryptophan--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380185|gb|EFE87703.1| tryptophan--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 325

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 92/339 (27%), Gaps = 47/339 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   +   LH G+    M           +     +    S+         +      + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMK--QFVDLQSDYDGFYFIADYHSL------TSLTSPETLREN 57

Query: 99  IQENIEKIKGI-FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
               +     I           +++       TWL           + +   +  +    
Sbjct: 58  TYNIVLDYLAIGLDPSKSTIFLQSNVPEHTELTWL-----------LSNITPIGLLERGH 106

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           S + +  +    +     Y +L A D +     YD  L   G DQ  ++    D+  +  
Sbjct: 107 SYKDKTAKGIPANTGLLTYPVLMAADIL----IYDSDLVPVGKDQKQHLEMTRDIAMKFN 162

Query: 218 TP---KLFALTSPLLTTA-------SGTKMGKTLSGAIWLNKEMTSPYNFWQYW------ 261
                + F L  PL+           G KM K+ +  I +                    
Sbjct: 163 QQYGVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFVTKKKLKEQVMSIVTDSTP 222

Query: 262 ----RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
               +N D+     +A        +E+             AK  +   I        E  
Sbjct: 223 LEEPKNPDNNIAKLYALFNNIDKQNELKEKFLAGNFGYGHAKTELLNSILEHFAVAREKR 282

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +A    M+     ++       +I+ ++V +   ++ L+
Sbjct: 283 EALEKDMDYVKDVLNEGSKKARAIAIEKVQKAKEIVGLV 321


>gi|319948696|ref|ZP_08022817.1| 30S ribosomal protein S4 [Dietzia cinnamea P4]
 gi|319437598|gb|EFV92597.1| 30S ribosomal protein S4 [Dietzia cinnamea P4]
          Length = 201

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 8/60 (13%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  LL ++          AG A +  +AR+ +      +N+  ++    ++   D   
Sbjct: 80  KTGENLLQILESRLDNVVYRAGLARTRRQARQLVAHGHFLVNDQKVTIPSYRVSQYDIID 139


>gi|241206829|ref|YP_002977925.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860719|gb|ACS58386.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 134

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 12/71 (16%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD----STGNIKLSFG 407
           +   +  A  A S + A+ H++S  ++IN    S     +K  D         ++ L   
Sbjct: 15  IDKWLFFARMAKSRSVAQSHIQSGHVRINGERCSQPSQMVKPGDRIELTLERRDVVL--- 71

Query: 408 KKNHIICHLCG 418
                +  L G
Sbjct: 72  -----VVRLAG 77


>gi|218884474|ref|YP_002428856.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
 gi|254764558|sp|B8D5V8|RS4E_DESK1 RecName: Full=30S ribosomal protein S4e
 gi|218766090|gb|ACL11489.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
          Length = 252

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 7/70 (10%)

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +SR + LL L+    G+A +  EARR +     KI+  +  + K  + + D         
Sbjct: 39  ISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGVMDVIEI----- 93

Query: 405 SFGKKNHIIC 414
             G   +   
Sbjct: 94  -VGVNKYYRV 102


>gi|20808026|ref|NP_623197.1| hypothetical protein TTE1597 [Thermoanaerobacter tengcongensis MB4]
 gi|20516604|gb|AAM24801.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 248

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 59/221 (26%), Gaps = 34/221 (15%)

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +  LT +   +  K         K     Y     + + +    + +   LT        
Sbjct: 26  TDFLTLSEQKQFEKLA----LKYKSEGVKYLLEGGYPSAERKIAIVYPDFLTFREEELPI 81

Query: 286 ---RMAKLQGKEINE----------AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
              R+         E           ++ +   I          ++     +      I 
Sbjct: 82  VALRVEGKNRFSHREVLGSILGLGIKREKVGDIIVKESKCDVILKEEMRDFLLFNLTKIG 141

Query: 333 SQHMPTISISKDEVSRGM----GL--------LTLIVKAGFATSTNEARRHLKSNAIKIN 380
            + +    I   +V +       +        +  +  +GF  S  +A   +KS  +++N
Sbjct: 142 RESVEVHEIELSDVMQPEIKYKDIFSTVASLRVDSVAASGFGISRTKASELIKSGLLRVN 201

Query: 381 NSIISNEKLQIKLQDFDST---GNIKLS--FGKKNHIICHL 416
              + +    +   D  S    G IKL    G        +
Sbjct: 202 WEAVEDPSFHVGEGDVISLRGFGRIKLQEIKGNTKKGRISI 242


>gi|258515575|ref|YP_003191797.1| pseudouridine synthase, RluA family [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257779280|gb|ACV63174.1| pseudouridine synthase, RluA family [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 305

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S ++ +R +    ++IN   ++  K +IK  D+ +
Sbjct: 28  SRSQLQRLIAQGLVEINGKKVA-AKYKIKPGDYIN 61


>gi|168187786|ref|ZP_02622421.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
 gi|169294366|gb|EDS76499.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
          Length = 206

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         K GF +S  EAR+ +      +N   +     Q+   D  S  
Sbjct: 89  GENLLKLLEMRLDNVVYKLGFGSSRAEARQLVTHGHFLVNGKKVDIISYQVSAGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|114319643|ref|YP_741326.1| SSU ribosomal protein S4P [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312435|sp|Q0ABF1|RS4_ALHEH RecName: Full=30S ribosomal protein S4
 gi|114226037|gb|ABI55836.1| SSU ribosomal protein S4P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 206

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFAT+  EAR+ +    +++N  +++   +Q+   D      
Sbjct: 106 GFATTRAEARQLVSHRGVQVNGRVVNVPSMQVSPGDLVGLKE 147


>gi|16804237|ref|NP_465722.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47095772|ref|ZP_00233378.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|217963640|ref|YP_002349318.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|224498944|ref|ZP_03667293.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224501002|ref|ZP_03669309.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254826913|ref|ZP_05231600.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254831365|ref|ZP_05236020.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254899100|ref|ZP_05259024.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912759|ref|ZP_05262771.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254937086|ref|ZP_05268783.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|290893145|ref|ZP_06556133.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|20178126|sp|Q8Y577|SYW_LISMO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|16411668|emb|CAD00276.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47015915|gb|EAL06842.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|217332910|gb|ACK38704.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|258599293|gb|EEW12618.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609688|gb|EEW22296.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|290557307|gb|EFD90833.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|293590753|gb|EFF99087.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|307571784|emb|CAR84963.1| trpS [Listeria monocytogenes L99]
 gi|313607431|gb|EFR83792.1| tryptophan--tRNA ligase [Listeria monocytogenes FSL F2-208]
          Length = 331

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   ++    +    + I  P  R + R  
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITVPQDRLKLR-- 56

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                     E+ + + + ++  G     + +          +   +L+       + RM
Sbjct: 57  ----------EQTRSLAALYLAVGLDPEKSTLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSAGKAGVSAGLLTYPPLMAADIL----LYQTDLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|319442996|ref|ZP_07992152.1| 30S ribosomal protein S4 [Corynebacterium variabile DSM 44702]
          Length = 201

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 8/60 (13%)

Query: 347 SRGMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  L+ L+         +AG A +  +AR+ +      +N   I+    Q+   D   
Sbjct: 80  KTGANLVILLETRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKINVPSFQVSQYDIID 139


>gi|317030176|ref|XP_001392029.2| S4 domain containing protein [Aspergillus niger CBS 513.88]
          Length = 465

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 148 FASSTRQARQFVIHGAVTVNGKKMRYPGYLLNPGDL 183


>gi|316932709|ref|YP_004107691.1| RNA-binding S4 domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600423|gb|ADU42958.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris DX-1]
          Length = 717

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG   S  +A   +    + +N  +I +  L +K  D  
Sbjct: 388 KAGERIAKVVARAGLC-SRRDAEAWITEGRVAVNGKVIDSPALDVKASDVI 437


>gi|172040040|ref|YP_001799754.1| 30S ribosomal protein S4 [Corynebacterium urealyticum DSM 7109]
 gi|226697828|sp|B1VEY1|RS4_CORU7 RecName: Full=30S ribosomal protein S4
 gi|171851344|emb|CAQ04320.1| 30S ribosomal protein S4 [Corynebacterium urealyticum DSM 7109]
          Length = 201

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            +I +AG A +  +AR+ +      +N   I+    ++   D   
Sbjct: 95  NVIYRAGLARTRRQARQLVSHGHFTVNGKKINVPSFRVSQYDIID 139


>gi|313680488|ref|YP_004058227.1| SSU ribosomal protein s4p [Oceanithermus profundus DSM 14977]
 gi|313153203|gb|ADR37054.1| SSU ribosomal protein S4P [Oceanithermus profundus DSM 14977]
          Length = 209

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++ + G A+S  +AR+ ++   I +    ++    +++  D  +        GKK
Sbjct: 103 NVVYRLGIASSRKQARQLVRHGHIAVGGRKVTVPSYRVRPGDVIAVTE----AGKK 154


>gi|313892596|ref|ZP_07826183.1| ribosomal protein S4 [Dialister microaerophilus UPII 345-E]
 gi|329121298|ref|ZP_08249925.1| 30S ribosomal protein S4 [Dialister micraerophilus DSM 19965]
 gi|313118993|gb|EFR42198.1| ribosomal protein S4 [Dialister microaerophilus UPII 345-E]
 gi|327470232|gb|EGF15695.1| 30S ribosomal protein S4 [Dialister micraerophilus DSM 19965]
          Length = 197

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AGFA S  +AR+ +    I +N   +      ++     S   
Sbjct: 90  NIVYRAGFARSIRQARQMVNHGLISVNGKKVDIPSYSVQPGQVVSLRE 137


>gi|284802645|ref|YP_003414510.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995787|ref|YP_003417555.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284058207|gb|ADB69148.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061254|gb|ADB72193.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 331

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   ++    +    + I  P  R + R  
Sbjct: 2   KKVIFSGIQPSGQ-LTLGNYIGALKQFGQFQDE-YECFYCIVDEHA-ITVPQDRLKLR-- 56

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                     E+ + + + ++  G     + +          +   +L+       + RM
Sbjct: 57  ----------EQTRSLAALYLAVGLDPEKSTLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    DL 
Sbjct: 107 TQ---FKDKSAGKAGVSAGLLTYPPLMAADIL----LYQTDLVPVGEDQKQHIELTRDLA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|281420178|ref|ZP_06251177.1| ribosomal large subunit pseudouridine synthase D [Prevotella copri
           DSM 18205]
 gi|281405673|gb|EFB36353.1| ribosomal large subunit pseudouridine synthase D [Prevotella copri
           DSM 18205]
          Length = 315

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
                +V +   LL  +++     S  + ++ L+   IK+N   I+     +K       
Sbjct: 25  EYEHYKVEKPAPLLEWLMENVKGPSKTKVKQTLQGRGIKVNGKTITQFDYALKP-----G 79

Query: 400 GNIKLSFGKKN 410
             + +S  KKN
Sbjct: 80  MKVSVSKTKKN 90


>gi|212224817|ref|YP_002308053.1| tryptophanyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|229558588|sp|B6YUH1|SYW_THEON RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|212009774|gb|ACJ17156.1| tryptophanyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 384

 Score = 38.2 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 35/299 (11%), Positives = 73/299 (24%), Gaps = 29/299 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPS 85
           L    S      Y G   +   +H GH+       WLQ K G      +           
Sbjct: 64  LQDYESGKGFFLYTGRGPSGP-MHIGHIIPFFATKWLQEKFGVNLYIQITD--------- 113

Query: 86  FRDESRRMMRSQEIQENIEKIKGI-FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
              + + + + +   E+ +          I  G       +  +  +          +  
Sbjct: 114 ---DEKFLFKDKLTFEDTKYWAYQNILDIIAVGFDPDRTFIFQDSEFT---------KIY 161

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                + + ++F   ++     +        Y  +QA       K       +   DQ  
Sbjct: 162 EMAIPIAKKINFSMAKAVFGFTEQSKIGMIFYPAIQAAPTFFEKKRCLIPAAI---DQDP 218

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF--WQYWR 262
                 D  E L   K  A+ S  +    G +   + S           P       +  
Sbjct: 219 YWRLQRDFAESLGYYKTAAIHSKFVPGLMGLEGKMSASKPETAIYLTDDPEEVGRKIWKY 278

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
            +      +  +R       +      L+     + KK++              +    
Sbjct: 279 ALTGGRATAKEQREKGGEPEKCVVFKWLEIFFEEDDKKLMERYHACKNGELLCGQCKRY 337


>gi|307823465|ref|ZP_07653694.1| ribosomal protein S4 [Methylobacter tundripaludum SV96]
 gi|307735450|gb|EFO06298.1| ribosomal protein S4 [Methylobacter tundripaludum SV96]
          Length = 206

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 8/57 (14%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           G  LL L+           GFA++  EAR+ +   +I++NN +I+    Q+   D  
Sbjct: 87  GQNLLNLLESRLDNVVYRMGFASTRAEARQLVSHKSIQVNNVLINVPSYQVSPGDVL 143


>gi|300870781|ref|YP_003785652.1| ribosomal large subunit pseudouridine synthase B [Brachyspira
           pilosicoli 95/1000]
 gi|300688480|gb|ADK31151.1| ribosomal large subunit pseudouridine synthase B [Brachyspira
           pilosicoli 95/1000]
          Length = 351

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              + L+ +I+++GFA S     + + S  +++NN +I +   ++K  D
Sbjct: 7   KENVRLVKVILESGFA-SRRNCEKAIMSGRVRVNNQVILDPAYRVKESD 54


>gi|260914657|ref|ZP_05921123.1| 30S ribosomal protein S4 [Pasteurella dagmatis ATCC 43325]
 gi|260631256|gb|EEX49441.1| 30S ribosomal protein S4 [Pasteurella dagmatis ATCC 43325]
          Length = 206

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 7/57 (12%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK-KNHIICH 415
           GFA + +EAR+ +   AI +N  +++    Q+ + D  +         K K      
Sbjct: 106 GFAATRSEARQLVSHKAIVVNGRVVNIPSFQVSVNDVVAVRE------KSKKQARIK 156


>gi|30248442|ref|NP_840512.1| 30S ribosomal protein S4 [Nitrosomonas europaea ATCC 19718]
 gi|41017978|sp|Q82X70|RS4A_NITEU RecName: Full=30S ribosomal protein S4 A
 gi|30138328|emb|CAD84336.1| Ribosomal protein S4:S4 domain [Nitrosomonas europaea ATCC 19718]
          Length = 208

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+           GF +S +EAR+ ++ N + +N    +     ++  D     
Sbjct: 89  GDNLLQLLESRLDNVAYNMGFGSSRSEARQIVRHNCVLLNGKRANIPSHLVEPGDLIEIA 148

Query: 401 NIKLSFGKKNHIICH 415
                   K+++   
Sbjct: 149 EHA-----KSYLRIK 158


>gi|312622542|ref|YP_004024155.1| pseudouridine synthase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203009|gb|ADQ46336.1| pseudouridine synthase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 233

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLSF 406
           M L   +   GF  S ++ ++ ++   + +N   I     +I  ++         +K S 
Sbjct: 1   MRLDKFLTHCGF-GSRSQVKKLIREGIVTVNGKQIVEVDFKINPEEDIVEVDGRVVKFSK 59


>gi|260460313|ref|ZP_05808565.1| hemolysin A [Mesorhizobium opportunistum WSM2075]
 gi|259033958|gb|EEW35217.1| hemolysin A [Mesorhizobium opportunistum WSM2075]
          Length = 254

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            L+V+ G   S + AR  ++   + ++  I       + LQ  
Sbjct: 15  DLLVQRGLFASRSRARDAVERGTVTVDGVIARKPGQNVSLQCL 57


>gi|254555533|ref|YP_003061950.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum JDM1]
 gi|254044460|gb|ACT61253.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum JDM1]
          Length = 338

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 54/184 (29%), Gaps = 25/184 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSI---IGDPSFRDESRRMMRSQE 98
            T   LH GH    +     LQ +G +    ++    ++     DP   ++ R+ +    
Sbjct: 12  PTGK-LHIGHYVGSLRNRVALQDSGDYDSYIMIADNQALTDNAHDP---EKIRKSLLQVA 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +      I    S+ +          M+N                + +   +NR  + ++
Sbjct: 68  MDYLAVGIDPQKSTILVQSQIPALTDMMNQY------------LNLVTVARLNRNPTVKT 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +    +S+    F Y + QA D               G DQ   +    ++      
Sbjct: 116 EIKQKAFGESVPAGFFVYPVSQAADITAFK----ATTVPVGDDQEPMLEQTREIVRSFNK 171

Query: 219 PKLF 222
               
Sbjct: 172 TYQT 175


>gi|229828640|ref|ZP_04454709.1| hypothetical protein GCWU000342_00705 [Shuttleworthia satelles DSM
           14600]
 gi|229793234|gb|EEP29348.1| hypothetical protein GCWU000342_00705 [Shuttleworthia satelles DSM
           14600]
          Length = 377

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 51/182 (28%), Gaps = 13/182 (7%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   L+    ++    +   ++ + +R   I+
Sbjct: 17  PTGK-LHLGHYVGSLQRRVELQNSGAFDQIYILIADDQAL----TDNWDNPQKIRDNIIE 71

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
             ++ +             ++    L+  T+                      +  F S 
Sbjct: 72  VTLDYLSIGIDPDKSNICVQSGIPALHALTFYYMNLVTTQRLSRNPTVKAEMGMRGFSSA 131

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
                  Q L    F Y + QA D           +   G DQ   I    ++  R    
Sbjct: 132 EGENDNAQGLPVGFFTYPVSQAADITAFK----ATMVPVGEDQEPMIEQTREIVRRFNQT 187

Query: 220 KL 221
             
Sbjct: 188 YQ 189


>gi|257064663|ref|YP_003144335.1| SSU ribosomal protein S4P [Slackia heliotrinireducens DSM 20476]
 gi|256792316|gb|ACV22986.1| SSU ribosomal protein S4P [Slackia heliotrinireducens DSM 20476]
          Length = 198

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA +  EAR+ +    I +N   ++    +++  D  S
Sbjct: 92  NVVFRLGFARTRKEARQTVSHGHIYVNGKRVNIPSYRVRPGDLVS 136


>gi|225621051|ref|YP_002722309.1| 30S ribosomal protein S4 [Brachyspira hyodysenteriae WA1]
 gi|225215871|gb|ACN84605.1| 30S ribosomal protein S4 [Brachyspira hyodysenteriae WA1]
          Length = 189

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++ + G A S N+AR+ +    I +N   ++     +K+ D
Sbjct: 83  NVVYRLGLAKSRNQARQFVAHGFISVNGKRMTIPSYCVKVGD 124


>gi|219115295|ref|XP_002178443.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410178|gb|EEC50108.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 252

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +++   + L  L+   G+  S  EA R ++   +K+N   + +   ++   D
Sbjct: 2   NKLGVSIRLNKLLAHQGWC-SRREANRFIEQGLVKVNG--VVSRDARVAPTD 50


>gi|291336627|gb|ADD96173.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 59

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + +     +   + +AG   S  EA R + +  + I+N +I+   + +  +
Sbjct: 9   NNIDTEERISKRLARAGLC-SRREAERWINAGRVSIDNEVINTAAINVSNK 58


>gi|111220573|ref|YP_711367.1| 30S ribosomal protein S4 [Frankia alni ACN14a]
 gi|123339013|sp|Q0RRP4|RS4_FRAAA RecName: Full=30S ribosomal protein S4
 gi|111148105|emb|CAJ59773.1| 30S ribosomal subunit protein S4 [Frankia alni ACN14a]
          Length = 209

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA S + AR+ ++   +++N   +     +I   D   
Sbjct: 108 GFAPSRDAARQAVRHGHVQVNGRKVDIPSYRISENDIVE 146


>gi|86739322|ref|YP_479722.1| 30S ribosomal protein S4 [Frankia sp. CcI3]
 gi|123751487|sp|Q2JFE9|RS4_FRASC RecName: Full=30S ribosomal protein S4
 gi|86566184|gb|ABD09993.1| SSU ribosomal protein S4P [Frankia sp. CcI3]
          Length = 209

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA S + AR+ ++   +++N   +     +I   D   
Sbjct: 108 GFAPSRDAARQAVRHGHVQVNGRKVDIPSYRISENDIVE 146


>gi|15966478|ref|NP_386831.1| putative ribosomal large subunit pseudouridine synthase protein
           [Sinorhizobium meliloti 1021]
 gi|307300485|ref|ZP_07580265.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti BL225C]
 gi|307318350|ref|ZP_07597785.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti AK83]
 gi|15075749|emb|CAC47304.1| Putative ribosomal large subunit pseudouridine synthase
           [Sinorhizobium meliloti 1021]
 gi|306896032|gb|EFN26783.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti AK83]
 gi|306904651|gb|EFN35235.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti BL225C]
          Length = 343

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 16/32 (50%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S N  +  ++  A+ IN + ++  K ++   D
Sbjct: 38  SRNRIKSLIEQGAVSINGATVTEPKRKVHPGD 69


>gi|308179550|ref|YP_003923678.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|308045041|gb|ADN97584.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 338

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 54/184 (29%), Gaps = 25/184 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSI---IGDPSFRDESRRMMRSQE 98
            T   LH GH    +     LQ +G +    ++    ++     DP   ++ R+ +    
Sbjct: 12  PTGK-LHIGHYVGSLRNRVALQDSGDYDSYIMIADNQALTDNAHDP---EKIRKSLLQVA 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +      I    S+ +          M+N                + +   +NR  + ++
Sbjct: 68  MDYLAVGIDPQKSTILVQSQIPALTDMMNQY------------LNLVTVARLNRNPTVKT 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +    +S+    F Y + QA D               G DQ   +    ++      
Sbjct: 116 EIKQKAFGESVPAGFFVYPVSQAADITAFK----ATTVPVGDDQEPMLEQTREIVRSFNK 171

Query: 219 PKLF 222
               
Sbjct: 172 TYQT 175


>gi|258574259|ref|XP_002541311.1| U3 small nucleolar ribonucleoprotein protein IMP3 [Uncinocarpus
           reesii 1704]
 gi|237901577|gb|EEP75978.1| U3 small nucleolar ribonucleoprotein protein IMP3 [Uncinocarpus
           reesii 1704]
          Length = 196

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+ + G   S + A + ++   +++   ++++    +   
Sbjct: 127 LMSRNGMVESVSAAVKFIEQGHVRVGTEVVTDPAFLVTRN 166


>gi|22299000|ref|NP_682247.1| hemolysin-like protein [Thermosynechococcus elongatus BP-1]
 gi|22295182|dbj|BAC09009.1| hemolysin-like protein [Thermosynechococcus elongatus BP-1]
          Length = 262

 Score = 38.2 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFG 407
           L+V+     S  +A+R +++ A+ +N+  I      + +            +S G
Sbjct: 11  LLVERHLCESRQQAQRWIRAGAVHVNHIPIDKPGTLVAVDATIQVKAKPAYVSRG 65


>gi|319649970|ref|ZP_08004120.1| tryptophanyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398408|gb|EFV79096.1| tryptophanyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 329

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 90/342 (26%), Gaps = 33/342 (9%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   + + +  G+    M  F   +  +     +    + I  P  R E R+ +RS
Sbjct: 3   TIFSGIQPSGT-ITLGNYIGAMKQFVELQNDYNCYFCIVDQHA-ITVPQDRLELRKNIRS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                                  +++        W+           +     +  +   
Sbjct: 61  LAALYLAVG----IDPEKSTLFIQSEVPAHAQAGWM-----------MQCVSYIGELERM 105

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + + + + ++S     Y  L A D +     Y+  L   G DQ  ++    DL ER 
Sbjct: 106 TQFKDKSEGKDAVSAGLLTYPPLMAADIL----LYNTDLVPVGEDQKQHLELTRDLAERF 161

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
                   T P +  A       +L   +    +       +    +            +
Sbjct: 162 NKKYNDIFTIPDVRIAKAGARVMSLQDPLKKMSKSDPNKKSFISLLDDPKQIEKKIKSAV 221

Query: 277 TTLP-----MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           T          E            +        EI     G+   +  A  +        
Sbjct: 222 TDSEGIVKYDKENKPGVSNLLSIYSILTGKTVAEIEKEYEGKGYGDFKAGLSDVVVGAIK 281

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
             Q      +  +E+        L++  G   +   A + +K
Sbjct: 282 PIQDKYYALMESEEL-------DLVLDQGAEKANKAAYKMIK 316


>gi|56696292|ref|YP_166649.1| ribosomal large subunit pseudouridine synthase D [Ruegeria pomeroyi
           DSS-3]
 gi|56678029|gb|AAV94695.1| ribosomal large subunit pseudouridine synthase D [Ruegeria pomeroyi
           DSS-3]
          Length = 342

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 3/25 (12%), Positives = 13/25 (52%)

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQ 394
           R +   A+ ++  ++++ K ++   
Sbjct: 39  RLITEGAVSVDGQVVTDPKARVVEG 63


>gi|121997385|ref|YP_001002172.1| tryptophanyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121588790|gb|ABM61370.1| tryptophanyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 405

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 61/189 (32%), Gaps = 19/189 (10%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +Q       G   T   LH GH   ++     LQ   ++    +    ++         
Sbjct: 4   INQRPSRVLSGMRPTGR-LHLGHYHGVLKNWVRLQNE-YECFFFVADWHAL--------- 52

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +        + +N+  +      ++  G     A +          +   LL  +     
Sbjct: 53  TTHYETPWVVGDNVWDM---VIDWLACGVNPKLARLFIQSRVPEHAELHLLLSMMTPLGW 109

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + R+ +F   + +L      ++    Y +LQ+ D + + K  +  +   G DQ  ++   
Sbjct: 110 LERVPTFRDQQEQLNDRDLSTYGFLGYPLLQSADVL-IYKATEVPV---GEDQVAHLELT 165

Query: 210 IDLGERLKT 218
            ++  R   
Sbjct: 166 REVARRFNH 174


>gi|312869186|ref|ZP_07729359.1| tryptophan--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095296|gb|EFQ53567.1| tryptophan--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 340

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 50/186 (26%), Gaps = 19/186 (10%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRD 88
            ++       G   T   LH GH    +     LQ TG +    ++    ++       D
Sbjct: 1   MTEKKHVILTGDRPTGK-LHIGHYVGSLKNRVALQNTGKYDTYIMIADQQAL------TD 53

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            +R   + +     +          +     K+   + +    L  +    L     S  
Sbjct: 54  NARDPEKIRRSLHEVALDY----LAVGIDPQKSTIFVQSQIPALSELTMHYLNLVTVSRL 109

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
             N  +  E  + +        F    Y + QA D               G DQ   +  
Sbjct: 110 KRNPTVKTEIQQKKFGESVPAGF--LIYPVSQAADITAFK----ADTVPVGDDQEPMLEQ 163

Query: 209 GIDLGE 214
             ++  
Sbjct: 164 TREIVR 169


>gi|306827950|ref|ZP_07461217.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes ATCC 10782]
 gi|304429869|gb|EFM32911.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes ATCC 10782]
          Length = 240

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +KL D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKLGD 45


>gi|68071863|ref|XP_677845.1| tyrosyl-tRNA synthetase [Plasmodium berghei strain ANKA]
 gi|56498114|emb|CAH99469.1| tyrosyl-tRNA synthetase, putative [Plasmodium berghei]
          Length = 372

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 24/238 (10%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMGGGT 78
           I        L  +  +  Y G++ +   +H   G L +  ++  L   G   I  +    
Sbjct: 41  IQPEELKLKLLQKRKLICYDGFEPSGR-MHIAQG-LLKSHIVNTLTNNGCTFIFWIADWF 98

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK-- 136
           + + +   +         +  Q  IE  K         G    +   +     +      
Sbjct: 99  AQLNN---KMSGDLNKIKKVGQYFIEVWKS-------CGMNMENVQFMWASDEINKNPDK 148

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           Y   + +I   F++NR+    ++  R + E +    +  Y  +Q  D   L    +  + 
Sbjct: 149 YWSTVIDISRSFNINRIKRCLTIMGRTEGEDNY-CSQILYPCMQCADIFFL----NVDIC 203

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLL---TTASGTKMGKTLSGAIWLNKEM 251
             G DQ    +   +  +  K  K   + S  +         KM K+   +     + 
Sbjct: 204 QLGIDQRKVNMLAREYCDIKKIKKKPVILSHGMLPGLLEGQEKMSKSDENSAIFMDDN 261


>gi|46121899|ref|XP_385503.1| hypothetical protein FG05327.1 [Gibberella zeae PH-1]
          Length = 514

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+S  +AR+ +   A+K+N   + +    +   D
Sbjct: 173 FASSVRQARQFVIHGAVKVNGKKMVHPSYALNPGD 207


>gi|154484655|ref|ZP_02027103.1| hypothetical protein EUBVEN_02372 [Eubacterium ventriosum ATCC
           27560]
 gi|149734503|gb|EDM50420.1| hypothetical protein EUBVEN_02372 [Eubacterium ventriosum ATCC
           27560]
          Length = 245

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI-ISNEKLQIKLQDFDSTG 400
            K      + L   +  AG+  S  EA R ++   +K+N    +  +K+ I         
Sbjct: 9   EKKSADEQIRLNKFLSDAGYC-SRREADRLVEQGVVKVNGKTAVMGQKVTINDSIMVKGK 67

Query: 401 NI 402
           NI
Sbjct: 68  NI 69


>gi|75676734|ref|YP_319155.1| pseudouridine synthase, Rsu [Nitrobacter winogradskyi Nb-255]
 gi|74421604|gb|ABA05803.1| pseudouridine synthase, Rsu [Nitrobacter winogradskyi Nb-255]
          Length = 680

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  +I +AG A S  +A   +    + +N  +I++  L +  +D
Sbjct: 351 KAGERVAKMISRAGLA-SRRDAEEMVTQGRVAVNGRVINSPALDVTSRD 398


>gi|220930992|ref|YP_002507900.1| ribosomal protein S4 [Halothermothrix orenii H 168]
 gi|254764592|sp|B8D0T6|RS4_HALOH RecName: Full=30S ribosomal protein S4
 gi|219992302|gb|ACL68905.1| ribosomal protein S4 [Halothermothrix orenii H 168]
          Length = 208

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 37/127 (29%), Gaps = 3/127 (2%)

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           +  T     +       +             ++      +             FD    +
Sbjct: 25  RCYTDKCAIDRRSYPPGEHGRRRNKPTEYGMQLREKQKVKRIYGILEKQFKRYFD---MA 81

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + MP ++           L  ++ + G ATS NEAR+ +    I +N   ++     +  
Sbjct: 82  EKMPGVTGENFLSILERRLDNVVYRLGLATSRNEARQFVLHGHILVNGRKVNIPSYLVDE 141

Query: 394 QDFDSTG 400
            D  S  
Sbjct: 142 GDVISVK 148


>gi|331701066|ref|YP_004398025.1| RNA-binding S4 domain-containing protein [Lactobacillus buchneri
           NRRL B-30929]
 gi|329128409|gb|AEB72962.1| RNA-binding S4 domain protein [Lactobacillus buchneri NRRL B-30929]
          Length = 263

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 23/46 (50%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +  +V  GF  S + A+  ++   I+IN    +   L+I +QD  S
Sbjct: 186 VDALVSEGFHISRHHAKELIEGGMIRINWEDANRPDLEISIQDIIS 231


>gi|115522955|ref|YP_779866.1| pseudouridine synthase Rsu [Rhodopseudomonas palustris BisA53]
 gi|115516902|gb|ABJ04886.1| Pseudouridine synthase, Rsu [Rhodopseudomonas palustris BisA53]
          Length = 787

 Score = 38.2 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +  ++ +AG   S  +A   +    + +N  II++  L +  +D  
Sbjct: 465 AGERIAKVVSRAGLC-SRRDAEDWITEGRVAVNGRIINSPALDVTERDVI 513


>gi|259508164|ref|ZP_05751064.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164253|gb|EEW48807.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 96

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              + L   I  A   ++  EA+  + +  + +N  +
Sbjct: 10  DEAIKLGQFIKLANLVSTGGEAKDAIANGDVTVNGEV 46


>gi|71065415|ref|YP_264142.1| 23S rRNA pseudouridine synthase F [Psychrobacter arcticus 273-4]
 gi|71038400|gb|AAZ18708.1| ribosomal large subunit pseudouridine synthase F [Psychrobacter
           arcticus 273-4]
          Length = 332

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  +A R ++   + +N    +     +        G + 
Sbjct: 13  ISESGIC-SRRDADRFIEQGNVYLNGKRAAVGDQVVAGDTVKVNGQLI 59


>gi|25026702|ref|NP_736756.1| hypothetical protein CE0146 [Corynebacterium efficiens YS-314]
 gi|23491981|dbj|BAC16956.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 118

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              + L   I  A   ++  EA+  + +  + +N  +
Sbjct: 32  DEAIKLGQFIKLANLVSTGGEAKDAIANGDVTVNGEV 68


>gi|229492232|ref|ZP_04386040.1| RNA-binding S4 domain protein [Rhodococcus erythropolis SK121]
 gi|229320858|gb|EEN86671.1| RNA-binding S4 domain protein [Rhodococcus erythropolis SK121]
          Length = 75

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            + ++P + I        + L   +  A    S  EA+  +    + +N   + +
Sbjct: 1   MTDNIPAVPIR----DEMIRLGQFLKLANLIESGAEAKEVIADGMVSVNGE-VED 50


>gi|227821073|ref|YP_002825043.1| hemolysin-like protein [Sinorhizobium fredii NGR234]
 gi|227340072|gb|ACP24290.1| hemolysin-like protein [Sinorhizobium fredii NGR234]
          Length = 251

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 6/52 (11%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE------KLQIKLQD 395
           + L  L++  G   S   AR  ++   + ++   ++           I + D
Sbjct: 9   IRLDQLLLNKGLVASRARARDAIQRGTVMVDGRTVTKPATAFAANATITIDD 60


>gi|326803723|ref|YP_004321541.1| pseudouridine synthase B, ribosomal large subunit [Aerococcus
           urinae ACS-120-V-Col10a]
 gi|326650759|gb|AEA00942.1| pseudouridine synthase B, ribosomal large subunit [Aerococcus
           urinae ACS-120-V-Col10a]
          Length = 240

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L  +I  AG   S  +A + + +  +++N  +++    ++  +D   
Sbjct: 4   LQKVIAHAG-VASRRDAEKLILAGRVRVNGQVVTELGTKVTKKDLVE 49


>gi|298245869|ref|ZP_06969675.1| pseudouridine synthase [Ktedonobacter racemifer DSM 44963]
 gi|297553350|gb|EFH87215.1| pseudouridine synthase [Ktedonobacter racemifer DSM 44963]
          Length = 277

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                 S   + +     + ++ ++G  L   +  AG   S   A   +    +++N +I
Sbjct: 11  QREQAGSDMPEELSAQGQASNQEAQGERLARFLAHAG-VASRRHAEELIAQGRVRVNGTI 69

Query: 384 IS 385
           I+
Sbjct: 70  IT 71


>gi|284039270|ref|YP_003389200.1| RNA-binding S4 domain protein [Spirosoma linguale DSM 74]
 gi|283818563|gb|ADB40401.1| RNA-binding S4 domain protein [Spirosoma linguale DSM 74]
          Length = 638

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            I  +G   S  EA   +    I +N  I++    ++K  D    G   L
Sbjct: 410 FIANSGVC-SRREADELIAHGDISVNGKIVTEMGYKVKEGDTVKYGTKVL 458


>gi|91205136|ref|YP_537491.1| ribosomal large subunit pseudouridine synthase [Rickettsia bellii
           RML369-C]
 gi|157827531|ref|YP_001496595.1| ribosomal large subunit pseudouridine synthase [Rickettsia bellii
           OSU 85-389]
 gi|122425930|sp|Q1RJR2|Y321_RICBR RecName: Full=Uncharacterized RNA pseudouridine synthase RBE_0321;
           AltName: Full=RNA pseudouridylate synthase; AltName:
           Full=RNA-uridine isomerase
 gi|91068680|gb|ABE04402.1| Ribosomal large subunit pseudouridine synthase [Rickettsia bellii
           RML369-C]
 gi|157802835|gb|ABV79558.1| Ribosomal large subunit pseudouridine synthase [Rickettsia bellii
           OSU 85-389]
          Length = 229

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  LI  AG   S  +A + +    +K+N  I+++    +   +
Sbjct: 4   LAKLISNAGIC-SRRDAEKLILDGQVKVNGIIVTSPATNVDTDN 46


>gi|38233157|ref|NP_938924.1| 30S ribosomal protein S4 [Corynebacterium diphtheriae NCTC 13129]
 gi|61215596|sp|Q6NJ64|RS4_CORDI RecName: Full=30S ribosomal protein S4
 gi|38199416|emb|CAE49059.1| 30S ribosomal protein S4 [Corynebacterium diphtheriae]
          Length = 201

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  L+ L+          AG A +  +AR+ +      +N   I+    ++   D   
Sbjct: 80  KTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKINVPSYRVSQYDIID 139

Query: 399 TGN 401
              
Sbjct: 140 VRE 142


>gi|294084708|ref|YP_003551466.1| pseudouridine synthase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664281|gb|ADE39382.1| Pseudouridine synthase, Rsu [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 312

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + + D+ S    +   I +AG   S  EA   +    +K+N  +I++  L +   D  +
Sbjct: 6   TFTLDKKSDSERIAKRIARAGVC-SRREAEARINEGRVKVNGKVITSPVLNVSDTDRIN 63


>gi|238021615|ref|ZP_04602041.1| hypothetical protein GCWU000324_01515 [Kingella oralis ATCC 51147]
 gi|237866229|gb|EEP67271.1| hypothetical protein GCWU000324_01515 [Kingella oralis ATCC 51147]
          Length = 102

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA++  EAR+ +   AI +N  +++    Q+K  D
Sbjct: 2   GFASTRAEARQLVSHKAIMVNGQVVNIPSFQVKAGD 37


>gi|237736761|ref|ZP_04567242.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420623|gb|EEO35670.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           mortiferum ATCC 9817]
          Length = 236

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + +   +   G   S  E  + ++   I++N  +IS   +++  +D       K+S  
Sbjct: 2   EEIRINKYLASLG-VGSRREIDKLIEEGKIRVNGEVIS-AGVKVTDKDIIEVKGKKISKD 59

Query: 408 --KKNHIICH 415
             KK + + +
Sbjct: 60  IEKKVYYMLN 69


>gi|93005736|ref|YP_580173.1| 23S rRNA pseudouridine synthase F [Psychrobacter cryohalolentis K5]
 gi|92393414|gb|ABE74689.1| ribosomal large subunit pseudouridine synthase F [Psychrobacter
           cryohalolentis K5]
          Length = 328

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  +A R ++   + +N    +     +        G + 
Sbjct: 13  ISESGIC-SRRDADRFIEQGNVYLNGKRAAVGDQVVAGDTVKVNGQLI 59


>gi|108802859|ref|YP_642796.1| RNA-binding S4 [Rubrobacter xylanophilus DSM 9941]
 gi|108764102|gb|ABG02984.1| RNA-binding S4 [Rubrobacter xylanophilus DSM 9941]
          Length = 64

 Score = 38.2 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +V  G+ L   +  A    S  EA+  +++  +++N  + +
Sbjct: 2   KVPAGITLGQALKLARVVGSGGEAKLVIRAGEVRVNGEVET 42


>gi|281412320|ref|YP_003346399.1| pseudouridine synthase [Thermotoga naphthophila RKU-10]
 gi|281373423|gb|ADA66985.1| pseudouridine synthase [Thermotoga naphthophila RKU-10]
          Length = 239

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  +G   +  E ++ +K   + +N  ++ +    +   D
Sbjct: 7   LSNSG-VGTRKEVKKLIKQGRVTVNGRVVLDPGHSVSEND 45


>gi|304569705|ref|YP_010887.2| ribosomal large subunit pseudouridine synthase B [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311233922|gb|ADP86776.1| RNA-binding S4 domain protein [Desulfovibrio vulgaris RCH1]
          Length = 292

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 2/67 (2%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIK 378
                     ++     P    S DEV  G   L   +  AG   S  +A   +    ++
Sbjct: 15  RQHTSPRKRAAVPHVPAPQAGTSPDEVEDGGTRLNKALSGAGVC-SRRQADTLIAGGKVR 73

Query: 379 INNSIIS 385
           +N  +++
Sbjct: 74  VNGEVVT 80


>gi|119486986|ref|ZP_01620858.1| Hemolysin A [Lyngbya sp. PCC 8106]
 gi|119455915|gb|EAW37049.1| Hemolysin A [Lyngbya sp. PCC 8106]
          Length = 300

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 21/40 (52%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L++     +S + A+R +++  + +N  +I     +I L+
Sbjct: 9   LLIDRNLCSSRHIAQRLIRAGEVMVNQQVIDKPGTEIDLE 48


>gi|148262069|ref|YP_001236196.1| RNA-binding S4 domain-containing protein [Acidiphilium cryptum
           JF-5]
 gi|326405581|ref|YP_004285663.1| RNA-binding protein [Acidiphilium multivorum AIU301]
 gi|146403750|gb|ABQ32277.1| heat shock protein Hsp15 [Acidiphilium cryptum JF-5]
 gi|325052443|dbj|BAJ82781.1| RNA-binding protein [Acidiphilium multivorum AIU301]
          Length = 98

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP    S  E +    L   +  A F  +   A R + +  ++IN  I      +++  D
Sbjct: 1   MPPPEPSGGEDAAWQRLDKFLFHARFVKTRGVAARLVAAGGVRINRQITEKPHARLRPGD 60

Query: 396 FD 397
             
Sbjct: 61  VL 62


>gi|257461220|ref|ZP_05626318.1| S4 domain protein [Campylobacter gracilis RM3268]
 gi|257441594|gb|EEV16739.1| S4 domain protein [Campylobacter gracilis RM3268]
          Length = 256

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 11/52 (21%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S  EA   +K   + IN  ++S+          + +G  K+  G +   +  
Sbjct: 17  SRREADELIKQGKVSINGRVVSD--------FIEVSGEEKIRIGSR---LIK 57


>gi|225873051|ref|YP_002754510.1| ribosomal protein S4 [Acidobacterium capsulatum ATCC 51196]
 gi|254764560|sp|C1F615|RS4_ACIC5 RecName: Full=30S ribosomal protein S4
 gi|225792033|gb|ACO32123.1| ribosomal protein S4 [Acidobacterium capsulatum ATCC 51196]
          Length = 209

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 5/121 (4%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
           ++     G+   + K  I      +   ++      T   +  +    +   P ++    
Sbjct: 34  EKRNFAPGQHGRDRKAKIVGYGLQLREKQKAKRIYFTLEGQFREYYEKASRAPGVTGELL 93

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
                  L  +  + GFATS  +AR+ ++   +++N   ++    Q+K+ D      IK+
Sbjct: 94  IQQLECRLDNIAFRLGFATSRRQARQIVRHGHVEVNGRKVNIPSFQVKVGD-----EIKI 148

Query: 405 S 405
            
Sbjct: 149 R 149


>gi|320590340|gb|EFX02783.1| 30S ribosomal subunit [Grosmannia clavigera kw1407]
          Length = 450

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           FA+S  +AR+ +   A+++N   +      +   D 
Sbjct: 150 FASSARQARQFVVHGAVRVNGKKMVYPGYLLNPGDL 185


>gi|315304365|ref|ZP_07874675.1| tryptophan--tRNA ligase [Listeria ivanovii FSL F6-596]
 gi|313627260|gb|EFR96083.1| tryptophan--tRNA ligase [Listeria ivanovii FSL F6-596]
          Length = 331

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   +   L  G+    +  F   Q   +    ++    + I  P  R + R+ 
Sbjct: 2   KKIIFSGIQPSGQ-LTLGNYIGALKQFGQFQDEYNCFYCIV-DEHA-ITVPQDRLKLRQ- 57

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                      + + + + ++  G     A +          +   +L+       + RM
Sbjct: 58  -----------QTRNLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQCNVYIGELERM 106

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   +  +S     Y  L A D +     Y   L   G DQ  +I    D+ 
Sbjct: 107 TQ---FKDKSDGKAGVSAGLLTYPPLMAADIL----LYQTNLVPVGEDQKQHIELTRDIA 159

Query: 214 ERLKTPKLFALTSP--LLTTASGTKMG 238
           ER         T P   +       M 
Sbjct: 160 ERFNKKHADIFTMPEVFIPKQGARVMS 186


>gi|300767077|ref|ZP_07076990.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|300495615|gb|EFK30770.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 341

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 54/184 (29%), Gaps = 25/184 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSI---IGDPSFRDESRRMMRSQE 98
            T   LH GH    +     LQ +G +    ++    ++     DP   ++ R+ +    
Sbjct: 15  PTGK-LHIGHYVGSLRNRVALQDSGDYDSYIMIADNQALTDNAHDP---EKIRKSLLQVA 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +      I    S+ +          M+N                + +   +NR  + ++
Sbjct: 71  MDYLAVGIDPQKSTILVQSQIPALTDMMNQY------------LNLVTVARLNRNPTVKT 118

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +    +S+    F Y + QA D               G DQ   +    ++      
Sbjct: 119 EIKQKAFGESVPAGFFVYPVSQAADITAFK----ATTVPVGDDQEPMLEQTREIVRSFNK 174

Query: 219 PKLF 222
               
Sbjct: 175 TYQT 178


>gi|148543830|ref|YP_001271200.1| RNA-binding S4 domain-containing protein [Lactobacillus reuteri DSM
           20016]
 gi|184153231|ref|YP_001841572.1| hypothetical protein LAR_0576 [Lactobacillus reuteri JCM 1112]
 gi|227364734|ref|ZP_03848783.1| ribosomal protein S4e [Lactobacillus reuteri MM2-3]
 gi|325682639|ref|ZP_08162156.1| S4 domain protein [Lactobacillus reuteri MM4-1A]
 gi|148530864|gb|ABQ82863.1| RNA-binding S4 domain protein [Lactobacillus reuteri DSM 20016]
 gi|183224575|dbj|BAG25092.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
 gi|227070193|gb|EEI08567.1| ribosomal protein S4e [Lactobacillus reuteri MM2-3]
 gi|324978478|gb|EGC15428.1| S4 domain protein [Lactobacillus reuteri MM4-1A]
          Length = 261

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L +++ AGF  S N A++ ++   +++N   I     QI + D  S
Sbjct: 186 LDVVIAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDLIS 231


>gi|90422426|ref|YP_530796.1| pseudouridine synthase Rsu [Rhodopseudomonas palustris BisB18]
 gi|90104440|gb|ABD86477.1| Pseudouridine synthase, Rsu [Rhodopseudomonas palustris BisB18]
          Length = 743

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +  ++ +AG   S  +A   +    + +N  II++  L +  +D  
Sbjct: 421 AGERIAKVVSRAGLC-SRRDAEEWVTQGRVAVNGRIINSPALDVTTRDVI 469


>gi|227544869|ref|ZP_03974918.1| ribosomal protein S4e [Lactobacillus reuteri CF48-3A]
 gi|300909911|ref|ZP_07127371.1| S4 domain-containing protein YlmH [Lactobacillus reuteri SD2112]
 gi|227185143|gb|EEI65214.1| ribosomal protein S4e [Lactobacillus reuteri CF48-3A]
 gi|300892559|gb|EFK85919.1| S4 domain-containing protein YlmH [Lactobacillus reuteri SD2112]
          Length = 261

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L +++ AGF  S N A++ ++   +++N   I     QI + D  S
Sbjct: 186 LDVVIAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDLIS 231


>gi|197303292|ref|ZP_03168332.1| hypothetical protein RUMLAC_02014 [Ruminococcus lactaris ATCC
           29176]
 gi|197297576|gb|EDY32136.1| hypothetical protein RUMLAC_02014 [Ruminococcus lactaris ATCC
           29176]
          Length = 361

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 69/225 (30%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG       ++    ++         +      ++I+
Sbjct: 11  PTGK-LHVGHYVGSLRRRVELQNTGDFDDIFIMIADAQAL---------TDNADNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYLACGLDPAKSTLFIQSQIPELCELSFYYMNLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D               G DQ   +    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FTYPISQAADITAFK----ATTVPVGEDQMPMLEQTKEIVHKFNSVY 173

Query: 221 LFALTSPLLTT------------ASGTKMGKTLSGAIWLNKEMTS 253
              L  P +                  KM K+L   I+L++E   
Sbjct: 174 GETLVDPKILLPENEACLRLPGIDGKAKMSKSLGNCIYLSEEPDE 218


>gi|259501882|ref|ZP_05744784.1| tryptophan-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170207|gb|EEW54702.1| tryptophan-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 340

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++  +    ++ RR +    +  
Sbjct: 14  PTGK-LHIGHYVGSLKNRVALQNTGKYDTYIMIADQQALTDNARDPEKIRRSLHEVSLDY 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 73  LAVGIDPQ----------KSTIFVQSQIPALSELTMHYLNLVTVSRLKRNPTVKTEIQQK 122

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +        F    Y + QA D               G DQ   +    ++  
Sbjct: 123 KFGESVPAGF--LIYPVSQAADITAFK----ADTVPVGDDQEPMLEQTREIVR 169


>gi|154174771|ref|YP_001407361.1| RNA-uridine isomerase [Campylobacter curvus 525.92]
 gi|112802450|gb|EAT99794.1| RNA-uridine isomerase [Campylobacter curvus 525.92]
          Length = 257

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +KS  I +NN ++S     +  +D    G   +   KK+  + 
Sbjct: 17  SRREADELIKSGKISVNNKLVSELATSVSDEDKVKIGGRLVKP-KKDFTMI 66


>gi|148269796|ref|YP_001244256.1| pseudouridine synthase [Thermotoga petrophila RKU-1]
 gi|147735340|gb|ABQ46680.1| ribosomal small subunit pseudouridine synthase A [Thermotoga
           petrophila RKU-1]
          Length = 239

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  +G   +  E ++ +K   + +N  ++ +    +   D
Sbjct: 7   LSNSG-VGTRKEVKKLIKQGRVTVNGRVVLDPGHSVSEND 45


>gi|118590702|ref|ZP_01548103.1| pseudouridylate synthase, subunit B protein [Stappia aggregata IAM
           12614]
 gi|118436678|gb|EAV43318.1| pseudouridylate synthase, subunit B protein [Stappia aggregata IAM
           12614]
          Length = 520

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           T  ++ +   RG  +  ++ + G   S  EA   +++  +++N  +++   + +   D
Sbjct: 91  TAPLAAEANDRGERIAKVMARVGLC-SRREAEVWIENGRVELNGKLLTTPAVTVTPDD 147


>gi|157825866|ref|YP_001493586.1| ribosomal large subunit pseudouridine synthase [Rickettsia akari
           str. Hartford]
 gi|157799824|gb|ABV75078.1| Ribosomal large subunit pseudouridine synthase [Rickettsia akari
           str. Hartford]
          Length = 229

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A + +    +K++   I +    + + +      I +
Sbjct: 4   LAKIISNAGIC-SRRDAEKLIAEGQVKVDGITILSPATNVDISNKIEVSGILI 55


>gi|325918894|ref|ZP_08180968.1| hypothetical protein XVE_5006 [Xanthomonas vesicatoria ATCC 35937]
 gi|325534880|gb|EGD06802.1| hypothetical protein XVE_5006 [Xanthomonas vesicatoria ATCC 35937]
          Length = 80

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 25/66 (37%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
            +++  
Sbjct: 64  EVEIRV 69


>gi|157363887|ref|YP_001470654.1| RNA-binding S4 domain-containing protein [Thermotoga lettingae TMO]
 gi|157314491|gb|ABV33590.1| RNA-binding S4 domain protein [Thermotoga lettingae TMO]
          Length = 234

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 12/70 (17%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK- 408
           M L   +  A    + +E R+ +K   I +N  I+ N    I   D           GK 
Sbjct: 1   MRLDRFLANAKI-GTRSEVRKIIKKGEISVNGEIVKNISFHINETDIVEY------MGKT 53

Query: 409 ----KNHIIC 414
               +   + 
Sbjct: 54  VVPYRKIYLI 63


>gi|149922188|ref|ZP_01910626.1| SSU ribosomal protein S4P [Plesiocystis pacifica SIR-1]
 gi|149816928|gb|EDM76413.1| SSU ribosomal protein S4P [Plesiocystis pacifica SIR-1]
          Length = 202

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 13/65 (20%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL+L+        V+ GFA S  EAR+ ++     IN   ++    Q++        
Sbjct: 83  GENLLSLLERRLDNVAVRCGFAASHAEARQLVRHGHFTINGKKVNIPSYQVRE-----GE 137

Query: 401 NIKLS 405
            I + 
Sbjct: 138 EIVVR 142


>gi|116333110|ref|YP_794637.1| tryptophanyl-tRNA synthetase II [Lactobacillus brevis ATCC 367]
 gi|116098457|gb|ABJ63606.1| tryptophanyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 338

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 50/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG ++   ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYVGSLKNRVALQNTGDYETYIMIADMQAL------TDNARDPEKIRHSLL 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+  L+ +    L  +    L     S  + N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPAKSTILVQSQIPALNELTMAYLNLVSVSRLNRNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                    F  F Y + QA D               G DQ   +    ++      
Sbjct: 121 AFGESVPAGF--FIYPVSQAADITAFK----ADTVPVGEDQEPMLEQTREIVRSFNN 171


>gi|88607522|ref|YP_504669.1| tryptophanyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598585|gb|ABD44055.1| tryptophanyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 331

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 44  LTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            +  SLH G+    +   W  LQ  G     ++    ++    S   E+  +        
Sbjct: 8   PSGGSLHLGNYLGAVK-KWVALQDAGKCVFCIV-DMHAL---TSGSAETLSIR------- 55

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                  + +S+I  G     A++    +     +   +L  +     +NRM  F+    
Sbjct: 56  --ANTLSLLASYIACGIDPAKAVVFLQSSVPEHAELCWILGCLTPVGWLNRMTQFKD--K 111

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                   +   ++Y +L A D +     Y   L   G+DQ  ++     +  
Sbjct: 112 SRSDSYRANLGLYSYPVLMAADIL----LYKADLVPVGNDQKQHLELAQSIAR 160


>gi|15674518|ref|NP_268692.1| hypothetical protein SPy_0369 [Streptococcus pyogenes M1 GAS]
 gi|13621621|gb|AAK33413.1| putative hypothetical protein [Streptococcus pyogenes M1 GAS]
          Length = 240

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 45


>gi|293563132|ref|ZP_06677597.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|291604910|gb|EFF34379.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1162]
          Length = 336

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 11  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFVMIADMQAL---------TDNAKNPEKVSS 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     K+   + +    L  +    L          N  +  E  + 
Sbjct: 61  NVLQV-ALDYLAVGLDPAKSTLFIQSQIPELDELTMYYLNLVSVGRVRRNPTVKTEIEQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++ +    
Sbjct: 120 KFGESVPTGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVQSFNH 170


>gi|218294781|ref|ZP_03495635.1| RNA-binding S4 domain protein [Thermus aquaticus Y51MC23]
 gi|218244689|gb|EED11213.1| RNA-binding S4 domain protein [Thermus aquaticus Y51MC23]
          Length = 209

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++ + GFA S  +AR+ ++   I +N   +     ++K  D
Sbjct: 103 NVVYRLGFAQSRRQARQMVRHGHITVNGRRVDLPAYRVKPGD 144


>gi|188995083|ref|YP_001929335.1| ribosomal large subunit pseudouridine synthase B [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594763|dbj|BAG33738.1| ribosomal large subunit pseudouridine synthase B [Porphyromonas
           gingivalis ATCC 33277]
          Length = 439

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++   I +N  +++    +I  QD
Sbjct: 198 ADPNEPIRLNKFLSNAGVC-SRREADLLIEKGEITVNGEVVTELGRRITRQD 248


>gi|163842717|ref|YP_001627121.1| hemolysin A [Brucella suis ATCC 23445]
 gi|163673440|gb|ABY37551.1| hemolysin A [Brucella suis ATCC 23445]
          Length = 238

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 18/36 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +V+ GF  + + AR  ++   +K++   I+     +
Sbjct: 1   MVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMV 36


>gi|68536849|ref|YP_251554.1| 30S ribosomal protein S4 [Corynebacterium jeikeium K411]
 gi|260579207|ref|ZP_05847097.1| 30S ribosomal protein S4 [Corynebacterium jeikeium ATCC 43734]
 gi|90101685|sp|Q4JTC1|RS4_CORJK RecName: Full=30S ribosomal protein S4
 gi|68264448|emb|CAI37936.1| 30S ribosomal protein S4 [Corynebacterium jeikeium K411]
 gi|258602693|gb|EEW15980.1| 30S ribosomal protein S4 [Corynebacterium jeikeium ATCC 43734]
          Length = 201

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  L+ L+          AG A +  +AR+ +      +N   ++    ++   D   
Sbjct: 80  KTGDNLVILLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKVNVPSFKVSQYDIID 139

Query: 399 TGN 401
              
Sbjct: 140 VRE 142


>gi|323342117|ref|ZP_08082350.1| pseudouridylate synthase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464542|gb|EFY09735.1| pseudouridylate synthase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 246

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF- 406
             + L   I  +G+  S  +A   +    +K+N   ++ + L++  +D      I ++  
Sbjct: 5   NNIRLQKFIAMSGYC-SRRKAEVLINEGKVKVNGIKVTEQGLKVSTEDRVMVNGILINVE 63

Query: 407 GKKNHIICH 415
            KK + I +
Sbjct: 64  EKKVYYILN 72


>gi|296126048|ref|YP_003633300.1| RNA-binding S4 domain protein [Brachyspira murdochii DSM 12563]
 gi|296017864|gb|ADG71101.1| RNA-binding S4 domain protein [Brachyspira murdochii DSM 12563]
          Length = 227

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            S  EA + +++  +KIN  + +N   Q+   D
Sbjct: 13  ASRREADKLIQNGNVKINGIVNTNPAYQVSNDD 45


>gi|139474355|ref|YP_001129071.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes str. Manfredo]
 gi|134272602|emb|CAM30869.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes str. Manfredo]
          Length = 240

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 45


>gi|111020720|ref|YP_703692.1| hypothetical protein RHA1_ro03734 [Rhodococcus jostii RHA1]
 gi|110820250|gb|ABG95534.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 75

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 13/37 (35%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              + L   +  A    S  EA+  +    + +N  +
Sbjct: 12  DESIRLGQFLKLANLIESGAEAKEVIADGLVSVNGEV 48


>gi|15618711|ref|NP_224997.1| tryptophanyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836335|ref|NP_300859.1| tryptophanyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752238|ref|NP_445606.1| tryptophanyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242162|ref|NP_877103.1| tryptophanyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|7994694|sp|Q9Z7A4|SYW_CHLPN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|4377113|gb|AAD18940.1| Tryptophanyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189982|gb|AAF38841.1| tryptophanyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979176|dbj|BAA99010.1| tryptophanyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33236673|gb|AAP98760.1| tryptophanyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 344

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 82/305 (26%), Gaps = 39/305 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH    +     LQ +  +    ++    ++      R E 
Sbjct: 2   NKKKRVLTGDRPTGK-LHLGHWVGSIKNRLELQNSPEYDCFFIIADLHTLT--TKIRKEE 58

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
              + +   +   + +             ++    +     L S+        I     +
Sbjct: 59  VLDVDNHIYEVLADWLSVGIDPTKSIIYLQSAIPEIYELHLLFSM-------LISINRVM 111

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
                 +  R+    E SLS+    Y ILQ+ D +        +    G D   ++    
Sbjct: 112 GIPSLKDMARNASIEEGSLSYGLIGYPILQSADIL----LAKAQFVPVGKDNEAHVELTR 167

Query: 211 DL---------GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW-------LNKEMTSP 254
           D+             +   L    + L+      KM K+ + AI+       + +++   
Sbjct: 168 DIARNFNRLYGQVFPEPEVLQGELTSLVGIDGQGKMSKSANNAIYLSDSDATITEKVRKM 227

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-------EAKKIIATEIT 307
           Y      R      V      +     +      +              E K  +A E+ 
Sbjct: 228 YTDPNRIRATTPGRVEGNPLFIYHDIFNPHKDEVEEFKARYRQGCIKDIEVKARLAEELI 287

Query: 308 TMVHG 312
             +  
Sbjct: 288 HFLKP 292


>gi|21909805|ref|NP_664073.1| putative ribosomal large subunit pseudouridine synthase
           [Streptococcus pyogenes MGAS315]
 gi|28896502|ref|NP_802852.1| hypothetical protein SPs1590 [Streptococcus pyogenes SSI-1]
 gi|21903991|gb|AAM78876.1| putative ribosomal large subunit pseudouridine synthase
           [Streptococcus pyogenes MGAS315]
 gi|28811756|dbj|BAC64685.1| putative hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 240

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 45


>gi|238922826|ref|YP_002936339.1| tryptophanyl-tRNA synthetase II [Eubacterium rectale ATCC 33656]
 gi|238874498|gb|ACR74205.1| tryptophanyl-tRNA synthetase II [Eubacterium rectale ATCC 33656]
 gi|291523728|emb|CBK89315.1| tryptophanyl-tRNA synthetase [Eubacterium rectale DSM 17629]
 gi|291528806|emb|CBK94392.1| tryptophanyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 362

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 57/180 (31%), Gaps = 26/180 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++         +      ++I+
Sbjct: 11  PTGR-LHIGHYVGSLRRRVELQNSGEYDKIFIMIADAQAL---------TDNFDNPEKIR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI          + Y +   D             +  +L     +  +V+R+    +V+
Sbjct: 61  QNI------IEVALDYLSAGLDPAKSTLFVQSQIPELTELTFFYSNLVTVSRLQRNPTVK 114

Query: 161 SR---LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           +       E S+    FNY I QA D               G DQ   I    ++  +  
Sbjct: 115 NEIKLRNFEASIPVGFFNYPISQAADITAFK----ATTVPVGEDQLPMIEQTREIVRKFN 170


>gi|323345230|ref|ZP_08085453.1| ribosomal large subunit pseudouridine synthase D [Prevotella oralis
           ATCC 33269]
 gi|323093344|gb|EFZ35922.1| ribosomal large subunit pseudouridine synthase D [Prevotella oralis
           ATCC 33269]
          Length = 299

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 5/65 (7%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V +   LL  +     + S ++ +  LK   I++N   ++     +          + +S
Sbjct: 19  VEQEASLLDWLFATVKSASKSKVKATLKGRGIRVNGKTVTQFDFPL-----LPGMKVSVS 73

Query: 406 FGKKN 410
             K+N
Sbjct: 74  KSKRN 78


>gi|315103786|gb|EFT75762.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
          Length = 245

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVEQGRRVDPE 50


>gi|289425044|ref|ZP_06426821.1| pseudouridylate synthase [Propionibacterium acnes SK187]
 gi|289154022|gb|EFD02710.1| pseudouridylate synthase [Propionibacterium acnes SK187]
 gi|313792449|gb|EFS40542.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
 gi|313801506|gb|EFS42755.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
 gi|313838267|gb|EFS75981.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
 gi|314963143|gb|EFT07243.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
 gi|315078206|gb|EFT50249.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
 gi|327453532|gb|EGF00187.1| hypothetical protein HMPREF9584_01968 [Propionibacterium acnes
           HL092PA1]
          Length = 245

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVEQGRRVDPE 50


>gi|284992847|ref|YP_003411401.1| 30S ribosomal protein S4 [Geodermatophilus obscurus DSM 43160]
 gi|284066092|gb|ADB77030.1| ribosomal protein S4 [Geodermatophilus obscurus DSM 43160]
          Length = 208

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AGFA S + AR+ ++   I++N   +     ++   D   
Sbjct: 102 NVVYRAGFAESRDMARQLVRHGHIRVNGRKVDIPSYRVASNDIIE 146


>gi|289428195|ref|ZP_06429891.1| pseudouridylate synthase [Propionibacterium acnes J165]
 gi|295130922|ref|YP_003581585.1| pseudouridylate synthase [Propionibacterium acnes SK137]
 gi|289158576|gb|EFD06783.1| pseudouridylate synthase [Propionibacterium acnes J165]
 gi|291375273|gb|ADD99127.1| pseudouridylate synthase [Propionibacterium acnes SK137]
 gi|313764054|gb|EFS35418.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
 gi|313771915|gb|EFS37881.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
 gi|313807148|gb|EFS45643.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
 gi|313809640|gb|EFS47376.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
 gi|313816404|gb|EFS54118.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
 gi|313819344|gb|EFS57058.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
 gi|313819993|gb|EFS57707.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
 gi|313823215|gb|EFS60929.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
 gi|313824997|gb|EFS62711.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
 gi|313827299|gb|EFS65013.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
 gi|313829960|gb|EFS67674.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
 gi|313833036|gb|EFS70750.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
 gi|314914915|gb|EFS78746.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
 gi|314917860|gb|EFS81691.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
 gi|314919749|gb|EFS83580.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
 gi|314924832|gb|EFS88663.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
 gi|314930009|gb|EFS93840.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
 gi|314956415|gb|EFT00727.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
 gi|314957284|gb|EFT01387.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
 gi|314960611|gb|EFT04713.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
 gi|314967733|gb|EFT11832.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
 gi|314972874|gb|EFT16971.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
 gi|314975703|gb|EFT19798.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
 gi|314978089|gb|EFT22183.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
 gi|314984113|gb|EFT28205.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
 gi|314986250|gb|EFT30342.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
 gi|314989536|gb|EFT33627.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
 gi|315080909|gb|EFT52885.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
 gi|315084832|gb|EFT56808.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
 gi|315086005|gb|EFT57981.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
 gi|315088276|gb|EFT60252.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
 gi|315095697|gb|EFT67673.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
 gi|315098205|gb|EFT70181.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
 gi|315101641|gb|EFT73617.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
 gi|315109460|gb|EFT81436.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
 gi|327327900|gb|EGE69674.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL096PA3]
 gi|327330039|gb|EGE71792.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL096PA2]
 gi|327442730|gb|EGE89384.1| hypothetical protein HMPREF9570_02678 [Propionibacterium acnes
           HL043PA1]
 gi|327443872|gb|EGE90526.1| hypothetical protein HMPREF9571_02471 [Propionibacterium acnes
           HL043PA2]
 gi|327443940|gb|EGE90594.1| hypothetical protein HMPREF9568_01854 [Propionibacterium acnes
           HL013PA2]
 gi|327452345|gb|EGE98999.1| hypothetical protein HMPREF9581_01384 [Propionibacterium acnes
           HL087PA3]
 gi|327452780|gb|EGE99434.1| hypothetical protein HMPREF9586_02253 [Propionibacterium acnes
           HL083PA2]
 gi|328752647|gb|EGF66263.1| hypothetical protein HMPREF9588_02444 [Propionibacterium acnes
           HL025PA2]
 gi|328753801|gb|EGF67417.1| hypothetical protein HMPREF9579_01456 [Propionibacterium acnes
           HL087PA1]
 gi|328755029|gb|EGF68645.1| hypothetical protein HMPREF9563_01406 [Propionibacterium acnes
           HL020PA1]
 gi|328761441|gb|EGF74967.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL099PA1]
 gi|332675803|gb|AEE72619.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes 266]
          Length = 245

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVEQGRRVDPE 50


>gi|50842867|ref|YP_056094.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes KPA171202]
 gi|282853641|ref|ZP_06262978.1| pseudouridylate synthase [Propionibacterium acnes J139]
 gi|50840469|gb|AAT83136.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes KPA171202]
 gi|282583094|gb|EFB88474.1| pseudouridylate synthase [Propionibacterium acnes J139]
 gi|313813285|gb|EFS50999.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
 gi|314923703|gb|EFS87534.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 gi|314967055|gb|EFT11154.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
 gi|314983150|gb|EFT27242.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
 gi|315092372|gb|EFT64348.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
 gi|315092741|gb|EFT64717.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
 gi|315105956|gb|EFT77932.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
 gi|327327189|gb|EGE68965.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL103PA1]
          Length = 245

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVEQGRRVDPE 50


>gi|288919689|ref|ZP_06414016.1| ribosomal protein S4 [Frankia sp. EUN1f]
 gi|288348878|gb|EFC83128.1| ribosomal protein S4 [Frankia sp. EUN1f]
          Length = 209

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA S + AR+ ++   +++N   +     ++   D   
Sbjct: 108 GFAPSRDAARQAVRHGHVQVNGRKVDIPSYRVTENDIVE 146


>gi|158317765|ref|YP_001510273.1| RNA-binding S4 domain-containing protein [Frankia sp. EAN1pec]
 gi|158113170|gb|ABW15367.1| RNA-binding S4 domain protein [Frankia sp. EAN1pec]
          Length = 209

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA S + AR+ ++   +++N   +     ++   D   
Sbjct: 108 GFAPSRDAARQAVRHGHVQVNGRKVDIPSYRVTENDIVE 146


>gi|331088278|ref|ZP_08337197.1| tryptophanyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330408522|gb|EGG87988.1| tryptophanyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 361

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 67/221 (30%), Gaps = 28/221 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG       ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLRRRVELQNTGEFDDIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            NI ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 61  SNIIEV-ALDYLACGLDPEKSTLFIQSQIPQLCELSFYYMNLVTVSRLQRNPTVKTEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDL 212
              +    + F  F Y I QA D                    Q        N + G  L
Sbjct: 120 RNFETSIPVGF--FTYPISQAADITAFKATTVPVGEDQMPMIEQTKEIVHKFNSVYGDTL 177

Query: 213 G--ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              + L       L  P +      KM K+L   I+L++E 
Sbjct: 178 IDPKILLPENQACLRLPGI--DGKAKMSKSLGNCIYLSEEP 216


>gi|256545246|ref|ZP_05472611.1| ribosomal large subunit pseudouridine synthase B [Anaerococcus
           vaginalis ATCC 51170]
 gi|256399073|gb|EEU12685.1| ribosomal large subunit pseudouridine synthase B [Anaerococcus
           vaginalis ATCC 51170]
          Length = 231

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 6/59 (10%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGKKNHI 412
           I K GFA S  ++  ++K+  + +N + + +   Q+K +D        +K+    KN  
Sbjct: 7   IAKTGFA-SRRKSEEYIKNGKVFVNGNKLEDLSYQVKEEDEVKIDGKILKIQ---KNFY 61


>gi|237786335|ref|YP_002907040.1| 30S ribosomal protein S4 [Corynebacterium kroppenstedtii DSM 44385]
 gi|259495271|sp|C4LKZ2|RS4_CORK4 RecName: Full=30S ribosomal protein S4
 gi|237759247|gb|ACR18497.1| 30S ribosomal protein S4 [Corynebacterium kroppenstedtii DSM 44385]
          Length = 201

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    Q+   D      
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFTVNGKKVNVPSFQVSQYDIIDVRE 142


>gi|224826309|ref|ZP_03699411.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
 gi|224601410|gb|EEG07591.1| conserved hypothetical protein [Lutiella nitroferrum 2002]
          Length = 73

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 19/57 (33%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           + L  L+     A S   A+  +    + ++  I   +  +I+     S     L  
Sbjct: 12  IALCDLLKACAVAHSGGAAKHMIAEGLVSVDGQIELRKTCKIRPGQVVSGDGFTLRV 68


>gi|15615433|ref|NP_243736.1| tryptophanyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139932|sp|Q9K8Y2|SYW_BACHD RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|10175491|dbj|BAB06589.1| tryptophanyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 330

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 59/196 (30%), Gaps = 27/196 (13%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRR 92
             T + G   + + L  G+    M           +     +    + I  P  R + R 
Sbjct: 2   KKTVFSGIQPSGT-LTLGNYLGAMK--HFVSLQEDYNCYFCIVDQHA-ITVPQDRLKLR- 56

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VN 151
                      E I+ + + ++  G   + A +         +     L  +    S + 
Sbjct: 57  -----------ENIRSLAALYLAVGIDPSKATLFIQSE----VPAHAQLGWMMQCVSYIG 101

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
            +      + +   ++++S     Y  L A D +     Y   +   G DQ  ++    D
Sbjct: 102 ELERMTQFKDKSDGKEAVSASLLTYPPLMAADIL----LYHTNIVPVGEDQKQHLELTRD 157

Query: 212 LGERLKTPKLFALTSP 227
           L ER         T P
Sbjct: 158 LAERFNKKYNDIFTIP 173


>gi|310778916|ref|YP_003967249.1| RNA-binding S4 domain protein [Ilyobacter polytropus DSM 2926]
 gi|309748239|gb|ADO82901.1| RNA-binding S4 domain protein [Ilyobacter polytropus DSM 2926]
          Length = 258

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 9/113 (7%)

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL-----TL 355
           I+   +   V  R+              + +        +I + E      L+       
Sbjct: 127 IVKEGVCYGVIFRDLFNFLENNLKVIGKIKVEVSETEEKNIPEMEFEEITYLVSSLRLDS 186

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           IV A    S ++A   ++   + +N S+   +   IK  D  +        GK
Sbjct: 187 IVAAITEKSRSQATELIREGTVSLNYSVRREKDASIKDGDIITVR----RKGK 235


>gi|289525630|emb|CBJ15108.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435192|gb|ADH17370.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438911|gb|ADH21064.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 346

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 33/245 (13%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESR 91
                  G   T   LH GH    +M    LQ  + +    ++    ++        ++R
Sbjct: 2   KKKRVLTGDRPTGK-LHLGHWIGSIMSRLQLQNDSRYDCFFIIADLHTL------TTKTR 54

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +    Q        I  + + ++  G     + +          +  +L         +N
Sbjct: 55  KEEVLQIDNH----IYDVLADWLSVGIDPEKSAIYLQSAI---PEIYELNLIFSMLTPLN 107

Query: 152 RMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            ++      E  R+    E+SLS     Y +LQ+ D +         L   G D   ++ 
Sbjct: 108 HIMGIPSIKEMARNASLNEESLSHGLIGYPVLQSADIL----LAKAHLVPVGKDNEAHVE 163

Query: 208 CGIDLGERLK--TPKLF-------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
              D+ +       ++F          + L+ T    KM K+ + AI+L+ +  +     
Sbjct: 164 LTRDIAKTFNRLCGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKI 223

Query: 259 QYWRN 263
           +    
Sbjct: 224 RKLYT 228


>gi|281421747|ref|ZP_06252746.1| ribosomal large subunit pseudouridine synthase B [Prevotella copri
           DSM 18205]
 gi|281404242|gb|EFB34922.1| ribosomal large subunit pseudouridine synthase B [Prevotella copri
           DSM 18205]
          Length = 253

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI--KLQD 395
                  + +  + L   +  AG   S  EA   +++  + +N  +++    +I    + 
Sbjct: 6   EYKEENIDPTEPLRLNKFLANAGVC-SRREADEFIQAGLVTVNGEVVTELGTKILRTDEV 64

Query: 396 FDSTGNIKLSFGKKNHIICH 415
                 + L   KK +++ +
Sbjct: 65  KFHDAPVTLE--KKVYVLLN 82


>gi|323491918|ref|ZP_08097088.1| 16S rRNA uridine-516 pseudouridylate synthase [Vibrio brasiliensis
           LMG 20546]
 gi|323313839|gb|EGA66933.1| 16S rRNA uridine-516 pseudouridylate synthase [Vibrio brasiliensis
           LMG 20546]
          Length = 342

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             G  L   I + GF  S  EA R ++   + IN  I
Sbjct: 4   DTGKRLNKFISETGFC-SRREADRLIEQGRVTINGKI 39


>gi|295103261|emb|CBL00805.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Faecalibacterium prausnitzii SL3/3]
          Length = 849

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 47/370 (12%), Positives = 104/370 (28%), Gaps = 44/370 (11%)

Query: 23  NPRELDILCSQGVVTAYIGYD---LTASSLHAGHLTQLMLL----FWLQKTGHKPISLMG 75
           + +   +         Y   +    + + LH GH      L       +K G+  +  MG
Sbjct: 18  DEKTFHVEIDHKKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRKNGYNVLYPMG 77

Query: 76  -GGTSIIGDPSFR-DESRRMMRSQEIQENIEKIKGI-----FSSFIKYGTGKTDALMLNN 128
                +   P+        +  +   + N++  +       FS         TD      
Sbjct: 78  WDAFGL---PTENFAMKNHIHPAIVTKSNVDHFRSQLKALGFSFDWDREINTTDPEYYKW 134

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+    Y   L       +VN     + V +  +    +     + ++ +      L 
Sbjct: 135 TQWIFLQLYKHGLA-YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHRVKSQWMLK 193

Query: 189 KNYDCRLQMGGSD---------QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
                   + G D                G   G  +        T  + TT   T  G 
Sbjct: 194 ITAYADKLIDGLDGLDYIERVSTQQKNWIGRSHGAEVNFGTTAGDTLTVYTTRCDTLFGA 253

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T    + ++ E      + +     +   V ++         +E  R +  +  E+N+ K
Sbjct: 254 T---YMVISPEHALLKAWLEKGIIKNAEAVKAY--------QAEAARKSDFERSELNKEK 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKDEVSR--GMGLLTL 355
             +  +    ++   E E     +        +     +P       E ++  G+ ++ +
Sbjct: 303 TGVQLDGVMGINPVNETEIPIFISDYVLSTYGTGAIMAVPAHDTRDWEFAKKFGLPIIEV 362

Query: 356 IVKAGFATST 365
           +   G   S 
Sbjct: 363 VK--GNTPSN 370


>gi|160946011|ref|ZP_02093237.1| hypothetical protein FAEPRAM212_03544 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443742|gb|EDP20747.1| hypothetical protein FAEPRAM212_03544 [Faecalibacterium prausnitzii
           M21/2]
          Length = 849

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 47/370 (12%), Positives = 104/370 (28%), Gaps = 44/370 (11%)

Query: 23  NPRELDILCSQGVVTAYIGYD---LTASSLHAGHLTQLMLL----FWLQKTGHKPISLMG 75
           + +   +         Y   +    + + LH GH      L       +K G+  +  MG
Sbjct: 18  DEKTFHVEIDHKKPKFYALVEFPYPSGAGLHVGHPRSYTALDVVSRKRRKNGYNVLYPMG 77

Query: 76  -GGTSIIGDPSFR-DESRRMMRSQEIQENIEKIKGI-----FSSFIKYGTGKTDALMLNN 128
                +   P+        +  +   + N++  +       FS         TD      
Sbjct: 78  WDAFGL---PTENFAMKNHIHPAIVTKSNVDHFRSQLKALGFSFDWDREINTTDPEYYKW 134

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+    Y   L       +VN     + V +  +    +     + ++ +      L 
Sbjct: 135 TQWIFLQLYKHGLA-YKKEMNVNWCTGCKCVLANEEVVNGVCERCGSEVVHRVKSQWMLK 193

Query: 189 KNYDCRLQMGGSD---------QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
                   + G D                G   G  +        T  + TT   T  G 
Sbjct: 194 ITAYADKLIDGLDGLDYIERVSTQQKNWIGRSHGAEVNFGTTAGDTLTVYTTRCDTLFGA 253

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T    + ++ E      + +     +   V ++         +E  R +  +  E+N+ K
Sbjct: 254 T---YMVISPEHALLKAWLEKGIIKNAEAVKAY--------QAEAARKSDFERSELNKEK 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKDEVSR--GMGLLTL 355
             +  +    ++   E E     +        +     +P       E ++  G+ ++ +
Sbjct: 303 TGVQLDGVMGINPVNETEIPIFISDYVLSTYGTGAIMAVPAHDTRDWEFAKKFGLPIIEV 362

Query: 356 IVKAGFATST 365
           +   G   S 
Sbjct: 363 VK--GNTPSN 370


>gi|86135132|ref|ZP_01053714.1| Tryptophanyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821995|gb|EAQ43142.1| Tryptophanyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 322

 Score = 37.8 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 66/212 (31%), Gaps = 35/212 (16%)

Query: 50  HAGHLT-QLMLLFWLQ-KTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQEIQENIEK 105
           H G+L   ++    +     ++    +    S+  I D     +  R          +  
Sbjct: 15  HLGNLLGAILPAIEMANDPKNEAFLFIADMHSLTQIKD----GKQLRENTYSTAATWLAC 70

Query: 106 IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
              I  +       ++D   +   +W            +  +F   R+    S + +  R
Sbjct: 71  GLDINKTVF---YRQSDIPQVTELSWY-----------LSCYFPYQRLTLAHSFKDKADR 116

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
              ++   F Y +L A D +     YD  +   G DQ  ++    D+  R        L 
Sbjct: 117 LSDVNSGLFTYPMLMAADIL----LYDAEIVPVGKDQLQHLEMTRDVANRFNHVVGETLV 172

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLN 248
           +P         L+    G KM K+    I + 
Sbjct: 173 APKAKIQENTKLVPGTDGEKMSKSRENTINIF 204


>gi|262045577|ref|ZP_06018597.1| ribosomal large subunit pseudouridine synthase F [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|259037074|gb|EEW38325.1| ribosomal large subunit pseudouridine synthase F [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
          Length = 291

 Score = 37.8 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           I ++G   S  EA R ++   + IN    +    Q+K  D        +
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAT-IGDQVKPGDLVKVNGQLI 59


>gi|238926866|ref|ZP_04658626.1| hemolysin A [Selenomonas flueggei ATCC 43531]
 gi|238885398|gb|EEQ49036.1| hemolysin A [Selenomonas flueggei ATCC 43531]
          Length = 268

 Score = 37.8 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 10/63 (15%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDF--DSTGNIKL 404
           L+   G A S   A+R + +  + +N   +         +  L++  +D    S G +KL
Sbjct: 9   LLTVQGLAPSRERAKRLIMAGQVLVNEQRVDKAGATVPADAALRVAGEDLPYVSRGGLKL 68

Query: 405 SFG 407
           + G
Sbjct: 69  AKG 71


>gi|226362962|ref|YP_002780744.1| hypothetical protein ROP_35520 [Rhodococcus opacus B4]
 gi|226241451|dbj|BAH51799.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 93

 Score = 37.8 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 13/37 (35%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              + L   +  A    S  EA+  +    + +N  +
Sbjct: 30  DESIRLGQFLKLANLIESGAEAKEVIADGLVSVNGEV 66


>gi|39996504|ref|NP_952455.1| ribosomal large subunit pseudouridine synthase B [Geobacter
           sulfurreducens PCA]
 gi|39983385|gb|AAR34778.1| ribosomal large subunit pseudouridine synthase B [Geobacter
           sulfurreducens PCA]
 gi|298505521|gb|ADI84244.1| 23S rRNA pseudouridine 2605 synthase [Geobacter sulfurreducens
           KN400]
          Length = 247

 Score = 37.8 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           L  L+ +AG   S  EA R +    + +N ++++
Sbjct: 5   LQKLLSQAG-VASRREAERFITEGRVAVNGTVVT 37


>gi|289810128|ref|ZP_06540757.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 256

 Score = 37.8 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|16762895|ref|NP_458512.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29144382|ref|NP_807724.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213420596|ref|ZP_03353662.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213581144|ref|ZP_03362970.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213647413|ref|ZP_03377466.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855503|ref|ZP_03383743.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289827405|ref|ZP_06546017.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|34098634|sp|Q8Z1V3|RLUF_SALTI RecName: Full=Ribosomal large subunit pseudouridine synthase F;
           AltName: Full=rRNA pseudouridylate synthase F; AltName:
           Full=rRNA-uridine isomerase F
 gi|25324020|pir||AE1012 probable pseudouridine synthase STY4410 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16505202|emb|CAD09198.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29140020|gb|AAO71584.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 289

 Score = 37.8 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|260767790|ref|ZP_05876725.1| ribosomal large subunit pseudouridine synthase F [Vibrio furnissii
           CIP 102972]
 gi|260617299|gb|EEX42483.1| ribosomal large subunit pseudouridine synthase F [Vibrio furnissii
           CIP 102972]
          Length = 347

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNS------IISNEKLQ 390
           I + GF  S  EA + ++   + IN         +S++   
Sbjct: 13  ISETGFC-SRREADKLIEQGRVTINGQLPEMGTKVSDDDEV 52


>gi|144143|gb|AAC05398.1| ribosomal protein S4 [Buchnera aphidicola]
 gi|448400|prf||1917188A ribosomal protein S4
          Length = 206

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 8/65 (12%)

Query: 342 SKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           S+ + + G  LL L+ +         GF  + +E+R+ +   +IK+NN+I++    QI  
Sbjct: 80  SRSKGNTGENLLQLLERRLDNVVYRMGFGCTRSESRQLISHKSIKVNNNIVNIASYQISP 139

Query: 394 QDFDS 398
            D  S
Sbjct: 140 NDRIS 144


>gi|296533931|ref|ZP_06896455.1| ribosomal large subunit pseudouridine synthase B [Roseomonas
           cervicalis ATCC 49957]
 gi|296265748|gb|EFH11849.1| ribosomal large subunit pseudouridine synthase B [Roseomonas
           cervicalis ATCC 49957]
          Length = 267

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            + +  +G  +   + +AG A S  +A + +    + +N  ++      ++  D     +
Sbjct: 3   EEQDGPKGERIAKWLARAGIA-SRRDAEKLIAEGQVAVNGRVLDGPASFVQPGD-----S 56

Query: 402 IKLSFGKK 409
           + +S GKK
Sbjct: 57  VTVS-GKK 63


>gi|213964948|ref|ZP_03393147.1| ribosomal protein S4 [Corynebacterium amycolatum SK46]
 gi|213952484|gb|EEB63867.1| ribosomal protein S4 [Corynebacterium amycolatum SK46]
          Length = 201

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AG A +  +AR+ +      +N   I+    Q+   D   
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFTVNGKKINVPSFQVSQYDIID 139


>gi|315500441|ref|YP_004089244.1| RNA-binding s4 domain protein [Asticcacaulis excentricus CB 48]
 gi|315418453|gb|ADU15093.1| RNA-binding S4 domain protein [Asticcacaulis excentricus CB 48]
          Length = 658

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +  ++ +AG A S  E  R +    I +N  ++      +   D  
Sbjct: 48  IAKVLARAGLA-SRREVERLIGLGKIAVNGRLLDTPATTVSPDDLI 92


>gi|260893345|ref|YP_003239442.1| ribosomal protein S4 [Ammonifex degensii KC4]
 gi|260865486|gb|ACX52592.1| ribosomal protein S4 [Ammonifex degensii KC4]
          Length = 208

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + G A S  EAR+ ++   I +N   +      +++ D  S
Sbjct: 102 NVVYRLGMAASRAEARQLVRHGHILVNGRRVDIPSYLVEVGDKIS 146


>gi|149182614|ref|ZP_01861084.1| 16S pseudouridylate synthase [Bacillus sp. SG-1]
 gi|148849692|gb|EDL63872.1| 16S pseudouridylate synthase [Bacillus sp. SG-1]
          Length = 239

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  E ++HLK     +N  ++ + K Q+  +
Sbjct: 14  SRKEVKKHLKGGGTVVNGEVVKDPKFQVDPE 44


>gi|118364469|ref|XP_001015456.1| Tubulin-tyrosine ligase family protein [Tetrahymena thermophila]
 gi|121976586|sp|Q23FE2|TTL3C_TETTH RecName: Full=Tubulin glycylase 3C
 gi|89297223|gb|EAR95211.1| Tubulin-tyrosine ligase family protein [Tetrahymena thermophila
            SB210]
          Length = 1088

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 351  GLLTLIVKAGFATSTNEARRHLKSNAIK-INNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ +++  G   S   AR+++++ A K I       EK  +   +    G   L  GKK
Sbjct: 1016 DIVKVVIDYGMEKSKK-ARKNIETGAFKRIYKGKYVEEKTNVVGLNLICEGVA-LKKGKK 1073

Query: 410  N 410
            N
Sbjct: 1074 N 1074


>gi|69246351|ref|ZP_00603907.1| Tryptophanyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257878161|ref|ZP_05657814.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881055|ref|ZP_05660708.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257889640|ref|ZP_05669293.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257898674|ref|ZP_05678327.1| tryptophanyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|258616333|ref|ZP_05714103.1| tryptophanyl-tRNA synthetase II [Enterococcus faecium DO]
 gi|260559208|ref|ZP_05831394.1| tryptophanyl-tRNA synthetase [Enterococcus faecium C68]
 gi|289565816|ref|ZP_06446258.1| tryptophanyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293569783|ref|ZP_06680870.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|293572579|ref|ZP_06683553.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E980]
 gi|294614010|ref|ZP_06693940.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619643|ref|ZP_06699065.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294623306|ref|ZP_06702168.1| tryptophanyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|68195304|gb|EAN09755.1| Tryptophanyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257812389|gb|EEV41147.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257816713|gb|EEV44041.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257826000|gb|EEV52626.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257836586|gb|EEV61660.1| tryptophanyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|260074965|gb|EEW63281.1| tryptophanyl-tRNA synthetase [Enterococcus faecium C68]
 gi|289162359|gb|EFD10217.1| tryptophanyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587531|gb|EFF19408.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291593117|gb|EFF24696.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594117|gb|EFF25569.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291597274|gb|EFF28463.1| tryptophanyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291607362|gb|EFF36710.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 336

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 11  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFVMIADMQAL---------TDNAKNPEKVSS 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     K+   + +    L  +    L          N  +  E  + 
Sbjct: 61  NVLQV-ALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGRVRRNPTVKTEIEQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++ +    
Sbjct: 120 KFGESVPTGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVQSFNH 170


>gi|315179378|gb|ADT86292.1| pseudouridine synthase family 1 protein [Vibrio furnissii NCTC
           11218]
          Length = 347

 Score = 37.8 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNS------IISNEKLQ 390
           I + GF  S  EA + ++   + IN         +S++   
Sbjct: 13  ISETGFC-SRREADKLIEQGRVTINGQLPEMGTKVSDDDEV 52


>gi|314939887|ref|ZP_07847093.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|314943734|ref|ZP_07850473.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133C]
 gi|314949690|ref|ZP_07853008.1| tryptophan--tRNA ligase [Enterococcus faecium TX0082]
 gi|314953236|ref|ZP_07856175.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133A]
 gi|314993684|ref|ZP_07859032.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133B]
 gi|314997399|ref|ZP_07862350.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313588534|gb|EFR67379.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313591858|gb|EFR70703.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133B]
 gi|313594702|gb|EFR73547.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133A]
 gi|313597597|gb|EFR76442.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133C]
 gi|313640850|gb|EFS05430.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|313643948|gb|EFS08528.1| tryptophan--tRNA ligase [Enterococcus faecium TX0082]
          Length = 348

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 23  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFVMIADMQAL---------TDNAKNPEKVSS 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     K+   + +    L  +    L          N  +  E  + 
Sbjct: 73  NVLQV-ALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGRVRRNPTVKTEIEQK 131

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++ +    
Sbjct: 132 KFGESVPTGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVQSFNH 182


>gi|309271966|ref|XP_001477520.2| PREDICTED: l-amino-acid oxidase [Mus musculus]
          Length = 522

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 51/180 (28%), Gaps = 12/180 (6%)

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES-RRMMRSQEIQENIEK----IKGIFS 111
           L     LQ  GH+   L    +  +G    R E+ R       I+    +     +    
Sbjct: 64  LTAAKILQDAGHQVTVL--EASGRVG---GRIETHRVPGAHWYIELGAMRIPINHRLSHE 118

Query: 112 SFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
              K+G    +    NN+TW L +               +   +  + V    ++    S
Sbjct: 119 LIKKFGLMLKEFCPCNNQTWVLVNGVRQRSGAVQADPGLLGYSVRADEVGKTAEQLFDAS 178

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC-GIDLGERLKTPKLFALTSPLL 229
             +      Q       + +    L   G+   G +   G  L       + F  T   +
Sbjct: 179 LRKLKNSSCQEVLEKYDSFSTKEYLIKVGNLSRGAVQMIGDMLNTDSGYYEAFTETLRGI 238


>gi|309262565|ref|XP_921173.2| PREDICTED: l-amino-acid oxidase isoform 2 [Mus musculus]
          Length = 648

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 51/180 (28%), Gaps = 12/180 (6%)

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES-RRMMRSQEIQENIEK----IKGIFS 111
           L     LQ  GH+   L    +  +G    R E+ R       I+    +     +    
Sbjct: 190 LTAAKILQDAGHQVTVL--EASGRVG---GRIETHRVPGAHWYIELGAMRIPINHRLSHE 244

Query: 112 SFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
              K+G    +    NN+TW L +               +   +  + V    ++    S
Sbjct: 245 LIKKFGLMLKEFCPCNNQTWVLVNGVRQRSGAVQADPGLLGYSVRADEVGKTAEQLFDAS 304

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC-GIDLGERLKTPKLFALTSPLL 229
             +      Q       + +    L   G+   G +   G  L       + F  T   +
Sbjct: 305 LRKLKNSSCQEVLEKYDSFSTKEYLIKVGNLSRGAVQMIGDMLNTDSGYYEAFTETLRGI 364


>gi|257887552|ref|ZP_05667205.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257896046|ref|ZP_05675699.1| tryptophanyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378782|ref|ZP_06624939.1| tryptophan--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257823606|gb|EEV50538.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832611|gb|EEV59032.1| tryptophanyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642575|gb|EFF60728.1| tryptophan--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 336

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 11  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFVMIADMQAL---------TDNAKNPEKVSS 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     K+   + +    L  +    L          N  +  E  + 
Sbjct: 61  NVLQV-ALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGRVRRNPTVKTEIEQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++ +    
Sbjct: 120 KFGESVPTGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVQSFNH 170


>gi|227551334|ref|ZP_03981383.1| tryptophan--tRNA ligase [Enterococcus faecium TX1330]
 gi|227179545|gb|EEI60517.1| tryptophan--tRNA ligase [Enterococcus faecium TX1330]
          Length = 348

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 23  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFVMIADMQAL---------TDNAKNPEKVSS 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     K+   + +    L  +    L          N  +  E  + 
Sbjct: 73  NVLQV-ALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGRVRRNPTVKTEIEQK 131

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++ +    
Sbjct: 132 KFGESVPTGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVQSFNH 182


>gi|269926072|ref|YP_003322695.1| hemolysin A [Thermobaculum terrenum ATCC BAA-798]
 gi|269789732|gb|ACZ41873.1| hemolysin A [Thermobaculum terrenum ATCC BAA-798]
          Length = 277

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              + L  L+V+ G A+S  +A+  + S  + +N     +   ++
Sbjct: 7   QDSIRLDKLMVELGLASSREKAQALISSGLVTVNGEKARSSDQRV 51


>gi|213163156|ref|ZP_03348866.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 289

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|21672746|ref|NP_660813.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654271|sp|P41186|RS4_BUCAP RecName: Full=30S ribosomal protein S4
 gi|21623392|gb|AAM68024.1| 30S ribosomal protein S4 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 206

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 8/65 (12%)

Query: 342 SKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           S+ + + G  LL L+ +         GF  + +E+R+ +   +IK+NN+I++    QI  
Sbjct: 80  SRSKGNTGENLLQLLERRLDNVVYRMGFGCTRSESRQLISHKSIKVNNNIVNIASYQISP 139

Query: 394 QDFDS 398
            D  S
Sbjct: 140 NDRIS 144


>gi|213424484|ref|ZP_03357281.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
          Length = 267

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|168239322|ref|ZP_02664380.1| ribosomal large subunit pseudouridine synthase F (rRNA-uridine
           isomerase F) [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168466867|ref|ZP_02700715.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194442736|ref|YP_002043438.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194735254|ref|YP_002117092.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|204927294|ref|ZP_03218496.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|194401399|gb|ACF61621.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194710756|gb|ACF89977.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195630602|gb|EDX49214.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197287935|gb|EDY27323.1| ribosomal large subunit pseudouridine synthase F (rRNA-uridine
           isomerase F) [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204323959|gb|EDZ09154.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
          Length = 289

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|168231182|ref|ZP_02656240.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194472572|ref|ZP_03078556.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194458936|gb|EDX47775.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205334218|gb|EDZ20982.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 289

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|167552572|ref|ZP_02346325.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168263493|ref|ZP_02685466.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|200389083|ref|ZP_03215695.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199606181|gb|EDZ04726.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|205322854|gb|EDZ10693.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205348000|gb|EDZ34631.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 289

 Score = 37.8 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|326336148|ref|ZP_08202320.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691657|gb|EGD33624.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 335

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 87/316 (27%), Gaps = 34/316 (10%)

Query: 50  HAGHLTQLMLLFWLQKT---GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI 106
           H G+L   + L  LQ      +     +    S+                 +I++     
Sbjct: 27  HLGNLLGAI-LPALQMAENPKNDSFFFIADLHSL----------------TQIKDGALLR 69

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
           +  +     + +   D   +         +  +L   +  FF   R+    S + +  R 
Sbjct: 70  QNTYEVAATWLSFGLDYHRVTFYRQSDVPQTAELAWYLECFFPYQRLTLAHSFKDKADRL 129

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           + ++   F Y +L A D +     YD ++   G DQ  +I    D+  R           
Sbjct: 130 EDVNTGLFTYPMLMAADIL----LYDAQIVPVGKDQLQHIEFARDVAGRFNYQMGETFVL 185

Query: 227 P---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P         ++    G KM K+    I +                 D   + +     T
Sbjct: 186 PKESVREDIMIIPGTDGEKMSKSRRNFINIFLPEKELKKQIMS-IQTDSTPLEAPKNPDT 244

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
               +    +A  +  +  E                         +      + + QH+ 
Sbjct: 245 CNVFALYRLLASSEQIKQMEVNYKGGNYGFGHAKTALYELILERFSHPREKFAYYMQHLS 304

Query: 338 TISISKDEVSRGMGLL 353
            +     E +    ++
Sbjct: 305 EVDDILKEGANKASII 320


>gi|168821347|ref|ZP_02833347.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|238913060|ref|ZP_04656897.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|205342140|gb|EDZ28904.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320088621|emb|CBY98379.1| pseudouridylate synthase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 289

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|330004789|ref|ZP_08305026.1| ribosomal large subunit pseudouridine synthase F [Klebsiella sp. MS
           92-3]
 gi|328536522|gb|EGF62861.1| ribosomal large subunit pseudouridine synthase F [Klebsiella sp. MS
           92-3]
          Length = 284

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           I ++G   S  EA R ++   + IN    +    Q+K  D        +
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAT-IGDQVKPGDLVKVNGRLI 59


>gi|301156469|emb|CBW15940.1| 16S rRNA pseudouridylate 516 synthase [Haemophilus parainfluenzae
           T3T1]
          Length = 232

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G     ++A + ++ +A+KIN  I+ N   ++ L+D
Sbjct: 10  NTGLT--RSQATKAIRQSAVKINGEIVKNGATKVSLED 45


>gi|291548766|emb|CBL25028.1| Uncharacterized conserved protein [Ruminococcus torques L2-14]
          Length = 71

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DS 398
           I        + L   +  AG   S  EA+  +++  + +N  I +    ++   D     
Sbjct: 4   IKLRPQDEFIKLGQALKAAGLVESGVEAKDVIQNGLVLVNGEIDTRRGRKLYPGDTASFD 63

Query: 399 TGNIKL 404
              IK+
Sbjct: 64  GNEIKI 69


>gi|153815709|ref|ZP_01968377.1| hypothetical protein RUMTOR_01947 [Ruminococcus torques ATCC 27756]
 gi|145846950|gb|EDK23868.1| hypothetical protein RUMTOR_01947 [Ruminococcus torques ATCC 27756]
          Length = 364

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 67/221 (30%), Gaps = 28/221 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG       ++    ++         +      ++++
Sbjct: 14  PTGR-LHVGHYVGSLRRRVELQNTGEFDDIFIMIADAQAL---------TDNADNPEKVR 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            NI ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 64  SNIIEV-ALDYLACGLDPEKSTLFIQSQIPQLCELSFYYMNLVTVSRLQRNPTVKTEIKM 122

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDL 212
              +    + F  F Y I QA D                    Q        N + G  L
Sbjct: 123 RNFETSIPVGF--FTYPISQAADITAFKATTVPVGEDQMPMIEQTKEIVHKFNSVYGDTL 180

Query: 213 G--ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              + L       L  P +      KM K+L   I+L++E 
Sbjct: 181 IDPKILLPENQACLRLPGI--DGKAKMSKSLGNCIYLSEEP 219


>gi|194366722|ref|YP_002029332.1| RNA-binding S4 domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349526|gb|ACF52649.1| RNA-binding S4 domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 232

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 14/33 (42%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             EARR+++   + +N  ++   +  +      
Sbjct: 18  RGEARRYIEGGWVSVNGEVVEQPQRPVDESAVI 50


>gi|323136857|ref|ZP_08071938.1| hemolysin A [Methylocystis sp. ATCC 49242]
 gi|322398174|gb|EFY00695.1| hemolysin A [Methylocystis sp. ATCC 49242]
          Length = 242

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            + + GF  S  +AR  +++  + +N  +++     I   
Sbjct: 9   ALHERGFFESRAKAREAIEAGLVTVNGRVVTKPSAPIADD 48


>gi|71910124|ref|YP_281674.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS5005]
 gi|71852906|gb|AAZ50929.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS5005]
          Length = 248

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 15  IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 53


>gi|14521895|ref|NP_127372.1| tryptophanyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|17367824|sp|Q9UY11|SYW_PYRAB RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|5459115|emb|CAB50601.1| trpS tryptophanyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 385

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 57/235 (24%), Gaps = 25/235 (10%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPS 85
           L           Y G   +   +H GH+       WLQ K G      +           
Sbjct: 65  LQDYEEGRGFFLYTGRGPSGP-MHIGHIIPFFATKWLQEKFGVNLYIQITD--------- 114

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
             DE      +   ++            I  G       +  N  +          +   
Sbjct: 115 --DEKFLFKENLTFEDTKHWAYENILDIIAVGFDPDKTFIFQNSEFT---------KIYE 163

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
               + + ++F   ++     +        +  +Q        +       +   DQ   
Sbjct: 164 MAIPIAKKINFSMAKAVFGFTEQSKIGMIFFPAIQIAPTFFEKRRCLIPAAI---DQDPY 220

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
                D  E L   K  A+ S  + + +      + S          SP +  + 
Sbjct: 221 WRLQRDFAESLGYYKTAAIHSKFVPSLTSLSGKMSASKPETAIYLTDSPEDVEKK 275


>gi|88860840|ref|ZP_01135476.1| putative ribosomal RNA pseudouridylate synthase [Pseudoalteromonas
           tunicata D2]
 gi|88817053|gb|EAR26872.1| putative ribosomal RNA pseudouridylate synthase [Pseudoalteromonas
           tunicata D2]
          Length = 229

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 1/58 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + G+ L   I  AG   S  +A R +    + +N  I  +               + +
Sbjct: 2   NDGIRLAKYIANAGLC-SRRQASRLIDQGLVTVNGGIADHICFVGTDDVITVNDELLV 58


>gi|302669377|ref|YP_003829337.1| S4 domain protein YaaA [Butyrivibrio proteoclasticus B316]
 gi|302393850|gb|ADL32755.1| S4 domain protein YaaA [Butyrivibrio proteoclasticus B316]
          Length = 71

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           +I   E    + L   + KAG   S  +A+  +++  +K+N  +
Sbjct: 3   TIRLREGDDFIKLGQALKKAGLEGSGVDAKNDIQAGLVKVNGEV 46


>gi|284052184|ref|ZP_06382394.1| RNA-binding S4 domain-containing protein [Arthrospira platensis
           str. Paraca]
 gi|291568948|dbj|BAI91220.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 72

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            + + L   + ++G   S  +A+  ++S  + +N  I +
Sbjct: 7   EQNIKLDKFLKRSGLVQSGGQAKAFIQSGYVMVNGEIET 45


>gi|312199993|ref|YP_004020054.1| ribosomal protein S4 [Frankia sp. EuI1c]
 gi|311231329|gb|ADP84184.1| ribosomal protein S4 [Frankia sp. EuI1c]
          Length = 208

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AGFA S + AR+ ++   +++N   +     ++   D   
Sbjct: 102 NVVYRAGFAPSRDAARQAVRHGHVQVNGGKVDIPSYRVSDNDIVE 146


>gi|239947675|ref|ZP_04699428.1| pseudouridine synthase, Rsu [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921951|gb|EER21975.1| pseudouridine synthase, Rsu [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 229

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A + +    +K++   I +    + + +      I +
Sbjct: 4   LAKIISNAGIC-SRRDAEKLIAEGQVKVDGITILSPATNVDISNQIEVSGILI 55


>gi|160932173|ref|ZP_02079564.1| hypothetical protein CLOLEP_01008 [Clostridium leptum DSM 753]
 gi|156868775|gb|EDO62147.1| hypothetical protein CLOLEP_01008 [Clostridium leptum DSM 753]
          Length = 200

 Score = 37.8 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 36/105 (34%), Gaps = 3/105 (2%)

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           ++ + K   A ++      +             ++ +     MP  +     +     L 
Sbjct: 36  QMRKKKGEYALQLAEKQKVKFVYGILERQFRSYYEKATR---MPGKAGENLLILVERRLD 92

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA++  +AR+ +      +N   ++     +K  D   
Sbjct: 93  NVVYRLGFASTRRDARQLVNHGHFTVNGKRVNIPSYLVKPGDVIE 137


>gi|237714337|ref|ZP_04544818.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D1]
 gi|229445501|gb|EEO51292.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D1]
          Length = 234

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             +  AG   S  EA   + +  + +N  +++    +IK  D   
Sbjct: 3   KFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVK 46


>gi|169633279|ref|YP_001707015.1| 16S rRNA pseudouridylate 516 synthase [Acinetobacter baumannii SDF]
 gi|169152071|emb|CAP00958.1| 16S rRNA pseudouridylate 516 synthase [Acinetobacter baumannii]
          Length = 234

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDF 396
            +K+ ++ I+  ++S+ K Q   ++F
Sbjct: 21  LIKNGSVSIDGEVVSDLKKQFSPENF 46


>gi|157151563|ref|YP_001449982.1| S4 domain-containing protein [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076357|gb|ABV11040.1| S4 domain [Streptococcus gordonii str. Challis substr. CH1]
          Length = 275

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 7/141 (4%)

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             T +    +DR          +  +++  +  T       ++ A T             
Sbjct: 122 FGTLMNRLGLDRRTFGDILVEKDRAQVLVDKRFTQFFIDHISKIAKTPVKLKEVGFERLL 181

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +    +SK+ ++  M L   ++ + F  S N+A + +    +K+N SII N    ++L 
Sbjct: 182 RVQEAQVSKEILASSMRL-DKLIASSFKLSRNDASQLIFGKHVKVNYSIIDNPSYLVELN 240

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
           D  S       FG     I  
Sbjct: 241 DLISVR----RFG--RFKIVK 255


>gi|46449495|gb|AAS96146.1| ribosomal large subunit pseudouridine synthase B [Desulfovibrio
           vulgaris str. Hildenborough]
          Length = 267

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 337 PTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           P    S DEV  G   L   +  AG   S  +A   +    +++N  +++
Sbjct: 7   PQAGTSPDEVEDGGTRLNKALSGAGVC-SRRQADTLIAGGKVRVNGEVVT 55


>gi|15835488|ref|NP_297247.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285669|ref|ZP_06195063.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289677|ref|ZP_06195979.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337064|ref|ZP_07225266.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878796|sp|Q9PJF5|SYW_CHLMU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|7190902|gb|AAF39670.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 346

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 98/346 (28%), Gaps = 45/346 (13%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +M    LQ    +    ++    ++        ++R+         
Sbjct: 12  PTGK-LHLGHWIGSIMNRLQLQNDPRYDCFFIIADLHTL------TTKTRKEEVLHIDSH 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS----FE 157
               I  + + ++  G     + +          +  +L         +N ++      E
Sbjct: 65  ----IYDVLADWLSVGIDPEKSAIYLQSAI---PEIYELNLLFSMLTPLNHIMGIPSIKE 117

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             R+    E+SLS     Y +LQ+ D +         L   G D   ++    D+ +   
Sbjct: 118 MARNASINEESLSHGLIGYPVLQSADIL----LAKAHLVPVGKDNEAHVELTRDIAKTFN 173

Query: 218 TPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                    P         L+ T    KM K+ + AI+L+ +  +     +     D   
Sbjct: 174 RLYGSVFPEPDILQGELTSLVGTNGQGKMSKSANNAIYLSDDEKTVQEKIRK-MYTDPNR 232

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           V       TT    E + +                 E       R          ++   
Sbjct: 233 V-----HATTPGRVEGNPLFIYHDLFNPH------KEEVEEFKTRYRQGCIKDVEVKARL 281

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
               +  +      + E      +L   ++ G     + AR  ++ 
Sbjct: 282 AEEINLFLNPFREKRSEFVAQPKILEEALQKGTEKMRSVARETMEE 327


>gi|317501907|ref|ZP_07960091.1| tryptophanyl-tRNA synthetase II [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316896587|gb|EFV18674.1| tryptophanyl-tRNA synthetase II [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 364

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 67/221 (30%), Gaps = 28/221 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG       ++    ++         +      ++++
Sbjct: 14  PTGR-LHVGHYVGSLRRRVELQNTGEFDDIFIMIADAQAL---------TDNADNPEKVR 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            NI ++  +          K+   + +    LC + +  +     S    N  +  E   
Sbjct: 64  SNIIEV-ALDYLACGLDPEKSTLFIQSQIPQLCELSFYYMNLVTVSRLQRNPTVKTEIKM 122

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDL 212
              +    + F  F Y I QA D                    Q        N + G  L
Sbjct: 123 RNFETSIPVGF--FTYPISQAADITAFKATTVPVGEDQMPMIEQTKEIVHKFNSVYGDTL 180

Query: 213 G--ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              + L       L  P +      KM K+L   I+L++E 
Sbjct: 181 IDPKILLPENQACLRLPGI--DGKAKMSKSLGNCIYLSEEP 219


>gi|227889762|ref|ZP_04007567.1| possible ribosomal protein S4e [Lactobacillus johnsonii ATCC 33200]
 gi|227849626|gb|EEJ59712.1| possible ribosomal protein S4e [Lactobacillus johnsonii ATCC 33200]
          Length = 265

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 19/136 (13%)

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
            D     Q     E K     EI  +   + +   +     +       S+ M +++IS 
Sbjct: 129 NDENGNWQFFVKAELKDYFLEEIDRIGRTKVK--LSELPLSKVLVQEDDSEEMTSVAISL 186

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----T 399
              +    +  L        S ++ ++ +++   K+N  +++   + I +QD  S     
Sbjct: 187 RLDAVISAITNL--------SRSQVKKIIEAGEAKLNWHLVTQSNIIISVQDMLSIRHYG 238

Query: 400 GNIKL-----SFGKKN 410
               +       GKK 
Sbjct: 239 RYEIINLATTKKGKKR 254


>gi|213028620|ref|ZP_03343067.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 122

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|197247683|ref|YP_002149101.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197211386|gb|ACH48783.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 289

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|62182642|ref|YP_219059.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62130275|gb|AAX67978.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322717140|gb|EFZ08711.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 289

 Score = 37.8 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|322411180|gb|EFY02088.1| hypothetical protein SDD27957_02020 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 240

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  +I++    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQVITDSATTVKSGD 45


>gi|310643846|ref|YP_003948604.1| tryptophan-tRNA ligase (tryptophanyl-tRNA synthetase)
           [Paenibacillus polymyxa SC2]
 gi|309248796|gb|ADO58363.1| Tryptophan-tRNA ligase (Tryptophanyl-tRNA synthetase)
           [Paenibacillus polymyxa SC2]
          Length = 329

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 34/237 (14%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   L  G+    M     LQ+  H+   ++    +             +   QE 
Sbjct: 7   GIQPSGQ-LTLGNYIGAMKNFVKLQE-DHQCYFMVPDLHA-------------ITVPQEP 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +  E+ + + + FI  G     + +          +   L+  + +   + RM      
Sbjct: 52  AQLREQSEAVAALFIAAGINPEKSNVFLQSHVPQHAELGWLMTTLTNMGELERMTQ---F 108

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LK 217
           + +   + S+    F Y  L A D +     Y+  L   G DQ  ++    DL  R   +
Sbjct: 109 KDKSAGKDSVGAGLFVYPSLMAADIL----LYNADLVPVGDDQKQHLELTRDLAGRFNHR 164

Query: 218 TPKLFALTSPLL---------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
               F +  P +            +  KM K+   A      +  P    +      
Sbjct: 165 YGDYFTVPEPYIPEVGARIMSLDDASKKMSKSNPNAGSFIALLDDPKVIRKKISRAT 221


>gi|156973557|ref|YP_001444464.1| pseudouridylate synthase [Vibrio harveyi ATCC BAA-1116]
 gi|156525151|gb|ABU70237.1| hypothetical protein VIBHAR_01258 [Vibrio harveyi ATCC BAA-1116]
          Length = 384

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I + GF  S  EA R ++   + IN          +   D    G
Sbjct: 13  ISETGFC-SRREADRLIEQGRVTINGQQPEMGTKVLPGDDVCVDG 56


>gi|19745526|ref|NP_606662.1| hypothetical protein spyM18_0418 [Streptococcus pyogenes MGAS8232]
 gi|71902965|ref|YP_279768.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS6180]
 gi|94987940|ref|YP_596041.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS9429]
 gi|94989814|ref|YP_597914.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10270]
 gi|94993700|ref|YP_601798.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10750]
 gi|19747645|gb|AAL97161.1| putative hypothetical protein [Streptococcus pyogenes MGAS8232]
 gi|71802060|gb|AAX71413.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS6180]
 gi|94541448|gb|ABF31497.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS9429]
 gi|94543322|gb|ABF33370.1| Ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10270]
 gi|94547208|gb|ABF37254.1| Ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10750]
          Length = 248

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 15  IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 53


>gi|332523615|ref|ZP_08399867.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332314879|gb|EGJ27864.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 240

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  +I++    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQVITDLATIVKSGD 45


>gi|269961576|ref|ZP_06175938.1| Ribosomal large subunit pseudouridine synthase F [Vibrio harveyi
           1DA3]
 gi|269833617|gb|EEZ87714.1| Ribosomal large subunit pseudouridine synthase F [Vibrio harveyi
           1DA3]
          Length = 384

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I + GF  S  EA R ++   + IN          +   D    G
Sbjct: 13  ISETGFC-SRREADRLIEQGRVTINGQQPEMGTKVLPGDDVCVDG 56


>gi|103486547|ref|YP_616108.1| pseudouridine synthase, Rsu [Sphingopyxis alaskensis RB2256]
 gi|98976624|gb|ABF52775.1| Pseudouridine synthase, Rsu [Sphingopyxis alaskensis RB2256]
          Length = 285

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             +       +  L+ +AG   S  +  R ++   I +N  +++  
Sbjct: 41  DTEREDGPQRIAKLLARAG-VGSRRDVERMIEEGRIALNGEVVTQP 85


>gi|56477618|ref|YP_159207.1| 30S ribosomal protein S4 [Aromatoleum aromaticum EbN1]
 gi|81357334|sp|Q5P308|RS4_AZOSE RecName: Full=30S ribosomal protein S4
 gi|56313661|emb|CAI08306.1| 30S Ribosomal protein S4 [Aromatoleum aromaticum EbN1]
          Length = 209

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLIV--------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  LL L+         + GF  S  E+R+ ++ N I +N   ++     ++  D
Sbjct: 90  GENLLQLLEGRLDSVVYRMGFGGSRAESRQLVRHNGILVNGKRVNIPSYVVRPGD 144


>gi|56477738|ref|YP_159327.1| propable 16S pseudouridylate synthase [Aromatoleum aromaticum EbN1]
 gi|56313781|emb|CAI08426.1| propable 16S pseudouridylate synthase [Aromatoleum aromaticum EbN1]
          Length = 314

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS------NEKLQIKLQ 394
           +   G+ L  ++ + G   S  EA   ++   + ++   +S      +   +I L 
Sbjct: 71  DAPEGVRLSKIMSERGLC-SRREADEIIERGWVFVDGQRVSELGIRIDPNAEITLA 125


>gi|324309734|gb|ADY18515.1| ribosomal protein S4 [Phaeodactylum tricornutum]
          Length = 249

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +   +    + ++  + +A F  S   AR+ +    + +N   I ++   ++  D   
Sbjct: 125 LPLKKFESRLDIV--LHRAKFVFSIKAARQLIVHGNVYVNQVKIKSKSHILRPGDSIE 180


>gi|198242968|ref|YP_002218105.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|207859366|ref|YP_002246017.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|197937484|gb|ACH74817.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|206711169|emb|CAR35544.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326625901|gb|EGE32246.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 289

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|259500879|ref|ZP_05743781.1| tryptophanyl-tRNA synthetase II [Lactobacillus iners DSM 13335]
 gi|302190668|ref|ZP_07266922.1| tryptophanyl-tRNA synthetase II [Lactobacillus iners AB-1]
 gi|309809142|ref|ZP_07703015.1| tryptophan--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|259167573|gb|EEW52068.1| tryptophanyl-tRNA synthetase II [Lactobacillus iners DSM 13335]
 gi|308170587|gb|EFO72607.1| tryptophan--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 339

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 19/173 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R   + +    
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYAPYIMIADTQAL------TDNARNPEKIKNSLI 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 64  QVALDY----LAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIKQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  + FL   Y + QA D           +   G DQ   +    ++  
Sbjct: 120 GFNDSLPIGFLN--YPVSQAADITAFK----ASIIPVGDDQEPMLEQTREIVR 166


>gi|298531061|ref|ZP_07018462.1| ribosomal protein S4 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509084|gb|EFI32989.1| ribosomal protein S4 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 208

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA S ++AR+ ++     IN + ++   + +K  D   
Sbjct: 108 GFANSRSQARQLVRHGHFHINGTRVNVPSILLKEGDVIG 146


>gi|224585957|ref|YP_002639756.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224470485|gb|ACN48315.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 289

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|205354985|ref|YP_002228786.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205274766|emb|CAR39823.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326630136|gb|EGE36479.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 289

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 59


>gi|157692817|ref|YP_001487279.1| pseudouridylate synthase [Bacillus pumilus SAFR-032]
 gi|157681575|gb|ABV62719.1| pseudouridylate synthase [Bacillus pumilus SAFR-032]
          Length = 281

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            I  +   +   L  +I  AG   S  +A   +K   + +N   ++   +++   D    
Sbjct: 29  KIVHEVKDKMERLQKVIAHAG-VASRRKAEELIKEGRVTVNGQTVTELGVKVGSSDKIEV 87

Query: 400 GNIKL 404
             +KL
Sbjct: 88  NGLKL 92


>gi|56416014|ref|YP_153089.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197364941|ref|YP_002144578.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56130271|gb|AAV79777.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197096418|emb|CAR62024.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 289

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDIVKVNGRLI 59


>gi|161505323|ref|YP_001572435.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866670|gb|ABX23293.1| hypothetical protein SARI_03464 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 309

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 31  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 77


>gi|50913682|ref|YP_059654.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10394]
 gi|50902756|gb|AAT86471.1| Ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10394]
          Length = 248

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 15  IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 53


>gi|58581168|ref|YP_200184.1| hypothetical protein XOO1545 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623093|ref|YP_450465.1| hypothetical protein XOO_1436 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575685|ref|YP_001912614.1| hypothetical protein PXO_04773 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58425762|gb|AAW74799.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367033|dbj|BAE68191.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188520137|gb|ACD58082.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 80

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 27/67 (40%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           S+  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+       
Sbjct: 3   SLEFDLDGDYIALNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQL 62

Query: 400 GNIKLSF 406
            ++++  
Sbjct: 63  DDVEIRV 69


>gi|332653422|ref|ZP_08419167.1| tryptophan--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332518568|gb|EGJ48171.1| tryptophan--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 355

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 66/254 (25%), Gaps = 36/254 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTG-----HKPISLMGGGTSIIGDPSFRDESRRMMR 95
           G   +   LH G+    +        G           M    +I          R+   
Sbjct: 33  GIQPSGD-LHLGNYLGAIK-----NWGARAEEFDCYYFMADMHTI--------TVRQTPA 78

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                    +     + +I  G       +          +   +L     F  ++RM  
Sbjct: 79  DLRR-----RTLTQLAQYIACGLDPEKNTLFIQSHIPAHAELGWVLNCYTMFGELSRMTQ 133

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           F+      K   +++   F Y  L A D +     Y       G+DQ  ++    ++ +R
Sbjct: 134 FKD--KSAKHADNINGGLFTYPALMAADIL----LYQPDFVPVGNDQKQHVELTRNVAQR 187

Query: 216 LK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                  +F +  P +       M          +K   S      +     +     F 
Sbjct: 188 FNNIYGDVFKVPEPYIPKTGARIMSLNAPD----SKMSKSIPEGCVFLMEKPEDIQRKFK 243

Query: 274 KRLTTLPMSEIDRM 287
           + +T        R 
Sbjct: 244 RAITDSDTERCVRF 257


>gi|206578740|ref|YP_002241036.1| ribosomal large subunit pseudouridine synthase F [Klebsiella
           pneumoniae 342]
 gi|290512420|ref|ZP_06551787.1| ribosomal large subunit pseudouridine synthase F [Klebsiella sp.
           1_1_55]
 gi|206567798|gb|ACI09574.1| ribosomal large subunit pseudouridine synthase F [Klebsiella
           pneumoniae 342]
 gi|289775415|gb|EFD83416.1| ribosomal large subunit pseudouridine synthase F [Klebsiella sp.
           1_1_55]
          Length = 291

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           I ++G   S  EA R ++   + IN    +    Q+K  D        +
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAT-IGDQVKPGDLVKVNGRLI 59


>gi|320160440|ref|YP_004173664.1| 30S ribosomal protein S4 [Anaerolinea thermophila UNI-1]
 gi|319994293|dbj|BAJ63064.1| 30S ribosomal protein S4 [Anaerolinea thermophila UNI-1]
          Length = 212

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 47/132 (35%), Gaps = 3/132 (2%)

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
             ++ + +               +  +E +   A ++      R             F +
Sbjct: 25  RCYSPKCSFEKRGFAPGQHGRTQQGRSERESDYARQLRAKQKARRVYGIFERQFRRYFGL 84

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           ++  + +  +++ +      M L  ++ + GFA+S  +AR+ +    I++NN       +
Sbjct: 85  ALRKKGLTGLNLLQTL---EMRLDNVVFRMGFASSRAQARQLVNHGHIQVNNHRADIPSM 141

Query: 390 QIKLQDFDSTGN 401
            +K  D  S   
Sbjct: 142 LVKPGDIISVKE 153


>gi|303247017|ref|ZP_07333293.1| ribosomal protein S4 [Desulfovibrio fructosovorans JJ]
 gi|302491724|gb|EFL51607.1| ribosomal protein S4 [Desulfovibrio fructosovorans JJ]
          Length = 208

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I + GFA S N+AR+ ++     +N   ++   LQ+K+ D      
Sbjct: 102 NVIYRLGFANSRNQARQLVRHGIFTVNGRRVTIPSLQVKVGDVIEVRE 149


>gi|308235815|ref|ZP_07666552.1| ribosomal RNA large subunit methyltransferase J [Gardnerella
           vaginalis ATCC 14018]
 gi|311114477|ref|YP_003985698.1| ribosomal RNA large subunit methyltransferase J [Gardnerella
           vaginalis ATCC 14019]
 gi|310945971|gb|ADP38675.1| ribosomal RNA large subunit methyltransferase J [Gardnerella
           vaginalis ATCC 14019]
          Length = 259

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +V  G   S   A+R +KS  +K++N I+      ++     S
Sbjct: 15  LVNRGLVKSRTTAQRLIKSGLVKVDNRIVYKSSFLVEKAQEIS 57


>gi|262202716|ref|YP_003273924.1| pseudouridine synthase [Gordonia bronchialis DSM 43247]
 gi|262086063|gb|ACY22031.1| pseudouridine synthase [Gordonia bronchialis DSM 43247]
          Length = 329

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           V+ G+ L  ++ +AG   S   A   + +  ++I+  I++ + L+I   
Sbjct: 85  VADGVRLQKVLAQAG-VASRRGAEEMIAAGRVEIDGEIVTEQGLRIDPD 132


>gi|321248591|ref|XP_003191176.1| nam9 protein, mitochondrial precursor [Cryptococcus gattii WM276]
 gi|317457643|gb|ADV19389.1| nam9 protein, mitochondrial precursor, putative [Cryptococcus
           gattii WM276]
          Length = 317

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQD 395
           EARR++    +K+N  +I N  + +   D
Sbjct: 159 EARRYVVQGHVKLNGQVIRNPNIMLNPGD 187


>gi|187917888|ref|YP_001883451.1| tryptophanyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119860736|gb|AAX16531.1| tryptophanyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 352

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 67/218 (30%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    ++     +  ++   ++    ++   P  +  S   +  +E+    
Sbjct: 12  PTG-SLHLGHYVGSIVNRLKYQEEYETYIIIADLHTLTTKPDLKSISEIPVNVREM---- 66

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVRSR 162
                    ++  G       +         ++   +L  I     + R+    +   + 
Sbjct: 67  ------VLDYLACGINPEKVNIYLQSAIPELLELNLILSMIVMVNRLQRIPSIKDMSVAA 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
              E         Y +L + D +         L   G D   ++    +L  +       
Sbjct: 121 GLSEVPYGL--LGYPVLMSSDILMAK----ANLVPVGRDNEAHVELTRELARKFNYLYGE 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  +  L+      KM K+L  AI+L+ +
Sbjct: 175 NFFPIPEAIFTDSQALVGIDGKAKMSKSLGNAIFLSDD 212


>gi|134045318|ref|YP_001096804.1| 30S ribosomal protein S4P [Methanococcus maripaludis C5]
 gi|172044139|sp|A4FWL4|RS4_METM5 RecName: Full=30S ribosomal protein S4P
 gi|132662943|gb|ABO34589.1| SSU ribosomal protein S4P [Methanococcus maripaludis C5]
          Length = 178

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 58/156 (37%), Gaps = 6/156 (3%)

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L K+  +P + W   R   + ++   +++   +   E+ +M         +A+K+I+   
Sbjct: 7   LGKKYDTPNHPWIGERIQSEKEI---SQKYGLVNKKELWKMETQLRNYRRQARKLISDTT 63

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T       +            +      H+ +++I      R   ++    + G A +  
Sbjct: 64  TQGGKEAVQLFNVLKRYAILVESEPTLDHVLSLNIESILERRLQTIVY---RKGLAKTAK 120

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +AR+ +    I +N   ++     + + + D+   +
Sbjct: 121 QARQFIVHGHIAVNGKRVTAPAYLVSVAENDAIEYV 156


>gi|315929260|gb|EFV08476.1| Tryptophan-tRNA ligase [Campylobacter jejuni subsp. jejuni 305]
          Length = 213

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 76/228 (33%), Gaps = 32/228 (14%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+   +    +    ++              
Sbjct: 1   MRVLTGLQPSGD-LHIGNYFGAIKQMVDAQEKS-QMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + ++L   +  F  +  + 
Sbjct: 46  SSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSD---VKEVMELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L A D +     +D R+   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMAADIL----LFDTRIVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTS 253
           ++        T P         ++    G KM K+    I +     +
Sbjct: 159 KVNNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKT 206


>gi|298373492|ref|ZP_06983481.1| ribosomal large subunit pseudouridine synthase B [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274544|gb|EFI16096.1| ribosomal large subunit pseudouridine synthase B [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 396

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 9/129 (6%)

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
             A  Q +     KK   +  +     R  + +  T          + ++   +S+    
Sbjct: 104 EYADKQWQPTGSGKKTYRSGESRQYGERGNSWRPQTNRQNTEKKQKYHKNSVDMSLP--- 160

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKL 404
               M L   I  +    S  EA   +++  + +N  +++    +I    D     +  +
Sbjct: 161 ----MRLNKFIANSNIC-SRREADEFIQAGVVSVNGQVVTELGTKIVPATDKVHFHDQLV 215

Query: 405 SFGKKNHII 413
           S  KK +I+
Sbjct: 216 SMEKKIYIL 224


>gi|225868958|ref|YP_002744906.1| hypothetical protein SZO_13920 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702234|emb|CAW99980.1| conserved hypothetical protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 264

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----TGNIKL 404
           +  ++      S N+A R +++  +K+N  +++     + + D  S         L
Sbjct: 188 VDRLIATVLKQSRNQAIRLVEAGKVKVNYQLVTKASQPVAIGDLISIRGYGRFSIL 243


>gi|251797775|ref|YP_003012506.1| ribosomal protein S4 [Paenibacillus sp. JDR-2]
 gi|247545401|gb|ACT02420.1| ribosomal protein S4 [Paenibacillus sp. JDR-2]
          Length = 199

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + GFA S   AR+ +    + +N   +      +   D      
Sbjct: 95  NLVFRLGFANSRAGARQLVSHGHVTVNGKKVDIASYTVSTGDVIGLRE 142


>gi|206890097|ref|YP_002249221.1| ribosomal protein S4 [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|226695094|sp|B5YG23|RS4_THEYD RecName: Full=30S ribosomal protein S4
 gi|206742035|gb|ACI21092.1| ribosomal protein S4 [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 208

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 12/68 (17%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+ +         GFA +  +AR+ ++     +N   +      ++  D     
Sbjct: 89  GENLLKLLERRLDNVIYRMGFAMNRRQARQLVRHGYFTVNGKKVDIPSYLVRPGDIIE-- 146

Query: 401 NIKLSFGK 408
              +  GK
Sbjct: 147 --IVQSGK 152


>gi|152972885|ref|YP_001338031.1| 23S rRNA pseudouridine synthase F [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238892493|ref|YP_002917227.1| 23S rRNA pseudouridine synthase F [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288937681|ref|YP_003441740.1| pseudouridine synthase [Klebsiella variicola At-22]
 gi|150957734|gb|ABR79764.1| pseudouridine synthase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238544809|dbj|BAH61160.1| pseudouridine synthase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|288892390|gb|ADC60708.1| pseudouridine synthase [Klebsiella variicola At-22]
          Length = 291

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           I ++G   S  EA R ++   + IN    +    Q+K  D        +
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAT-IGDQVKPGDLVKVNGRLI 59


>gi|239998211|ref|ZP_04718135.1| hypothetical protein Ngon3_01827 [Neisseria gonorrhoeae 35/02]
          Length = 121

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE     H R              +       +   ++  ++ +  + L  L+  AG A 
Sbjct: 12  TEQAVRTHRRFCGNFGCGGGRCYNNALFLKGDIMEATVYLED-NEYIALCDLLKLAGLAE 70

Query: 364 STNEARRHLKSNAIKINN 381
           S  +A+  +    +  N 
Sbjct: 71  SGGQAKAFIAEGLVLRNG 88


>gi|16767443|ref|NP_463058.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161617332|ref|YP_001591297.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167991374|ref|ZP_02572473.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168243582|ref|ZP_02668514.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|194448614|ref|YP_002048178.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197263699|ref|ZP_03163773.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|34098651|sp|Q8ZKL1|RLUF_SALTY RecName: Full=Ribosomal large subunit pseudouridine synthase F;
           AltName: Full=rRNA pseudouridylate synthase F; AltName:
           Full=rRNA-uridine isomerase F
 gi|16422749|gb|AAL23017.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161366696|gb|ABX70464.1| hypothetical protein SPAB_05187 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194406918|gb|ACF67137.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|197241954|gb|EDY24574.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205330127|gb|EDZ16891.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205337314|gb|EDZ24078.1| ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|261249293|emb|CBG27155.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996496|gb|ACY91381.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160685|emb|CBW20216.1| putative pseudouridine synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915294|dbj|BAJ39268.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223059|gb|EFX48129.1| Ribosomal large subunit pseudouridine synthase F [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|323132528|gb|ADX19958.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332991008|gb|AEF09991.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 289

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDIVKVNGRLI 59


>gi|326332845|ref|ZP_08199103.1| S4 domain protein [Nocardioidaceae bacterium Broad-1]
 gi|325949403|gb|EGD41485.1| S4 domain protein [Nocardioidaceae bacterium Broad-1]
          Length = 80

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 15/36 (41%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
              + L   +  A    + +EAR  + +  +K+N  
Sbjct: 11  DEVIRLGQFLKLANLVETGSEARPAITAGEVKVNGE 46


>gi|194016715|ref|ZP_03055328.1| ribosomal large subunit pseudouridine synthase B [Bacillus pumilus
           ATCC 7061]
 gi|194011321|gb|EDW20890.1| ribosomal large subunit pseudouridine synthase B [Bacillus pumilus
           ATCC 7061]
          Length = 290

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            I  +   +   L  +I  AG   S  +A   +K   + +N   ++   +++   D    
Sbjct: 38  KIVHEVKDKMERLQKVIAHAG-VASRRKAEELIKEGRVTVNGQTVTELGVKVGSSDKIEV 96

Query: 400 GNIKL 404
             +KL
Sbjct: 97  NGLKL 101


>gi|169842308|ref|ZP_02875413.1| hypothetical protein cdivTM_34399 [candidate division TM7
          single-cell isolate TM7a]
          Length = 43

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQG 34
          M     +    L  RG I Q++N  E+  + + G
Sbjct: 3  MDDM--NCYEELKARGLIAQVTNEEEISKMINNG 34


>gi|148264550|ref|YP_001231256.1| pseudouridine synthase [Geobacter uraniireducens Rf4]
 gi|146398050|gb|ABQ26683.1| ribosomal large subunit pseudouridine synthase B [Geobacter
           uraniireducens Rf4]
          Length = 239

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           L  ++ +AG A S  EA R +    + +N  +++
Sbjct: 5   LQKILSQAGIA-SRREAERIITDGRVAVNGQVVT 37


>gi|90961915|ref|YP_535831.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           salivarius UCC118]
 gi|301299322|ref|ZP_07205607.1| pseudouridine synthase B, ribosomal large subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|90821109|gb|ABD99748.1| Ribosomal large subunit pseudouridine synthase B [Lactobacillus
           salivarius UCC118]
 gi|300214638|gb|ADJ79054.1| Pseudouridine synthase [Lactobacillus salivarius CECT 5713]
 gi|300853062|gb|EFK80661.1| pseudouridine synthase B, ribosomal large subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 242

 Score = 37.4 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG-KKN 410
           L  ++  AG   S   + + ++   + +N  +++    +++  D  S     L    KK 
Sbjct: 5   LQKVMANAG-VASRRASEKLIQEGRVMVNGVVVTELGTKVESDDSISVDGKLLKKDEKKV 63

Query: 411 HIIC 414
           + + 
Sbjct: 64  YYLL 67


>gi|300932897|ref|ZP_07148153.1| tryptophanyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 379

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 77/243 (31%), Gaps = 30/243 (12%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +       G   T+ S H G+    +     LQ++ +  +  +    + I  P +  +  
Sbjct: 43  ERKQRVVSGLQPTSDSYHLGNYLGAVKQFIDLQES-YDTLYFIPDQHA-ITVPGYNPKDL 100

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R        +    +             ++     +   W        +L  I       
Sbjct: 101 RNRTLAGAAQ---LLALGIDPEKSTLFVQSHVPEHSQLAW--------VLMCITGDGEAR 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+  +S  +   + +   + Y +L A D + L + +   +   G DQ  ++    +
Sbjct: 150 RMTQFKD-KSAKQGSDNTTAGLYAYPMLMAADIL-LYRPHLVPV---GEDQRQHLELTRN 204

Query: 212 LGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           L ER      K F +   ++  ++           KM K+      +   +  P    + 
Sbjct: 205 LAERFNSRYKKTFVVPEGMIPESAAKIYDLQEPTAKMSKSGDNPKGIINLLDDPKVSAKR 264

Query: 261 WRN 263
            R+
Sbjct: 265 IRS 267


>gi|227890935|ref|ZP_04008740.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           salivarius ATCC 11741]
 gi|227867344|gb|EEJ74765.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           salivarius ATCC 11741]
          Length = 242

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG-KKN 410
           L  ++  AG   S   + + ++   + +N  +++    +++  D  S     L    KK 
Sbjct: 5   LQKVMANAG-VASRRASEKLIQEGRVMVNGVVVTELGTKVESDDSISVDGKLLKKDEKKV 63

Query: 411 HIIC 414
           + + 
Sbjct: 64  YYLL 67


>gi|261367775|ref|ZP_05980658.1| ribosomal protein S4 [Subdoligranulum variabile DSM 15176]
 gi|282570573|gb|EFB76108.1| ribosomal protein S4 [Subdoligranulum variabile DSM 15176]
          Length = 200

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           ++ + K   AT++      +             ++ +        +++    V     L 
Sbjct: 36  QMRKKKSEYATQLNEKQKVKFVYGILEKQFHTYYETATRMPGQTGVNL---LVLVERRLD 92

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA +  +AR+ +  N   +N   ++     +K  D   
Sbjct: 93  NVVYRLGFAKTRRDARQLVSHNHFTVNGKRVNIPSYLVKPGDVIE 137


>gi|213025095|ref|ZP_03339542.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 61

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 1/37 (2%)

Query: 44 LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           T  SLH GH    +      +  H+   L+     +
Sbjct: 13 PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL 48


>gi|166154800|ref|YP_001654918.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155675|ref|YP_001653930.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336076|ref|ZP_07224320.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|165930788|emb|CAP04285.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931663|emb|CAP07239.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 346

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 78/245 (31%), Gaps = 33/245 (13%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESR 91
                  G   T   LH GH    +M    LQ  + +    ++    ++        ++R
Sbjct: 2   KKKRVLTGDRPTGK-LHLGHWIGSIMNRLQLQNDSRYDCFFIIADLHTL------TTKTR 54

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +    Q        I  + + ++  G     + +          +  +L         +N
Sbjct: 55  KEEVLQIDNH----IYDVLADWLSVGINPEKSAIYLQSAI---PEIYELNLIFSMLTPLN 107

Query: 152 RMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            ++      E   +    E+SLS     Y +LQ+ D +         L   G D   ++ 
Sbjct: 108 HIMGIPSIKEMASNASLNEESLSHGLIGYPVLQSADIL----LAKAHLVPVGKDNEAHVE 163

Query: 208 CGIDLGERLK--TPKLF-------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
              D+ +       ++F          + L+ T    KM K+ + AI+L+ +  +     
Sbjct: 164 LTRDIAKTFNRLYGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKI 223

Query: 259 QYWRN 263
           +    
Sbjct: 224 RKLYT 228


>gi|153010359|ref|YP_001371573.1| RNA-binding S4 domain-containing protein [Ochrobactrum anthropi
           ATCC 49188]
 gi|151562247|gb|ABS15744.1| RNA-binding S4 domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 576

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--ST 399
           ++ +   G  +   + +AG A S  EA   + +  I +N  ++ +  + +K  D      
Sbjct: 50  AEGQEDTGERIAKRLARAGIA-SRREAETMIAAGRIAVNGKVLESPAVNVKRTDIITVDG 108

Query: 400 GNIK 403
             +K
Sbjct: 109 KPLK 112


>gi|297243603|ref|ZP_06927534.1| rRNA methylase [Gardnerella vaginalis AMD]
 gi|296888354|gb|EFH27095.1| rRNA methylase [Gardnerella vaginalis AMD]
          Length = 267

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 21/49 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            +VK G A S   A+R +++  + ++N  I+     +      +    K
Sbjct: 22  ALVKRGLAESRTTAQRLIRAGVVSVDNRNITKSSFLVNNSHAITINESK 70


>gi|240013394|ref|ZP_04720307.1| hypothetical protein NgonD_01879 [Neisseria gonorrhoeae DGI18]
 gi|240015836|ref|ZP_04722376.1| hypothetical protein NgonFA_01497 [Neisseria gonorrhoeae FA6140]
 gi|240079976|ref|ZP_04724519.1| hypothetical protein NgonF_01480 [Neisseria gonorrhoeae FA19]
 gi|240112183|ref|ZP_04726673.1| hypothetical protein NgonM_01129 [Neisseria gonorrhoeae MS11]
 gi|240114928|ref|ZP_04728990.1| hypothetical protein NgonPID1_01517 [Neisseria gonorrhoeae PID18]
 gi|240117216|ref|ZP_04731278.1| hypothetical protein NgonPID_01934 [Neisseria gonorrhoeae PID1]
 gi|240120465|ref|ZP_04733427.1| hypothetical protein NgonPI_01564 [Neisseria gonorrhoeae PID24-1]
 gi|240122766|ref|ZP_04735722.1| hypothetical protein NgonP_02265 [Neisseria gonorrhoeae PID332]
 gi|240124959|ref|ZP_04737845.1| hypothetical protein NgonSK_01829 [Neisseria gonorrhoeae SK-92-679]
 gi|260441257|ref|ZP_05795073.1| hypothetical protein NgonDG_09273 [Neisseria gonorrhoeae DGI2]
          Length = 121

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE     H R              +       +   ++  ++ +  + L  L+  AG A 
Sbjct: 12  TEQAVRTHRRFCGNFGCGGGRCYNNALFLKGDIMEATVYLED-NEYIALCDLLKLAGLAE 70

Query: 364 STNEARRHLKSNAIKINN 381
           S  +A+  +    +  N 
Sbjct: 71  SGGQAKAFIAEGLVLRNG 88


>gi|150402490|ref|YP_001329784.1| 30S ribosomal protein S4P [Methanococcus maripaludis C7]
 gi|171472890|sp|A6VGQ7|RS4_METM7 RecName: Full=30S ribosomal protein S4P
 gi|150033520|gb|ABR65633.1| ribosomal protein S4 [Methanococcus maripaludis C7]
          Length = 178

 Score = 37.4 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 61/156 (39%), Gaps = 6/156 (3%)

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L K+  +P + W   R   + ++   +++   +   E+ +M         +A+K+I+   
Sbjct: 7   LGKKYDTPNHPWIGERIQSEREI---SQKYGLVNKKELWKMETQLRNYRRQARKLISDTT 63

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T       +            +      H+ +++I   E      L T++ K G A +  
Sbjct: 64  TQGGKEAVQLFNVLKRYAILVEQEPTLDHVLSLNI---ESILERRLQTMVYKKGLAKTAK 120

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +AR+ +    I +N   +++    + + + D+   +
Sbjct: 121 QARQFIVHGHIAVNGKRVTSPSYLVSVAENDAIEYV 156


>gi|307720277|ref|YP_003891417.1| tryptophanyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978370|gb|ADN08405.1| tryptophanyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 321

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 82/316 (25%), Gaps = 34/316 (10%)

Query: 36  VTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q   +   + +    +     S +D  R   
Sbjct: 1   MRVLTGIQPSGD-LHIGNYFGSIKQMVDAQNN-NDTFAFIANYHAQ---TSVKDGKRLAE 55

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            + +   +   +     +       ++D   +    W            + SF  +  + 
Sbjct: 56  LTMQSATDFLALG--IDAQKSIFWVQSDVKEVLELYW-----------VLSSFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + +  +  + +   F+Y +L A D +     Y   +   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKTAKGIAANHSLFSYPVLMAADIL----LYQPDIVPVGKDQIQHVEIARDIAI 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-- 263
           +           P          +    G KM K+ +  + +  E        +      
Sbjct: 159 KFNNEYGDIFKLPEYKIEANVATVPGTDGQKMSKSYNNTVNIFGEEKKQLKTIKKIVTEP 218

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           +   +   +                + +  +    +         +       E      
Sbjct: 219 VPLEEPKEYENCNVYNMAKLFLNENECKELQERYKRGGEGHGHFKLYLHDIIWEYFKPYR 278

Query: 324 MECFDMSIHSQHMPTI 339
                 + H   +  I
Sbjct: 279 QRREYYAAHQDEVRDI 294


>gi|56751203|ref|YP_171904.1| hemolysin-like protein [Synechococcus elongatus PCC 6301]
 gi|81299130|ref|YP_399338.1| hemolysin A [Synechococcus elongatus PCC 7942]
 gi|56686162|dbj|BAD79384.1| hemolysin-like protein [Synechococcus elongatus PCC 6301]
 gi|81168011|gb|ABB56351.1| hemolysin A [Synechococcus elongatus PCC 7942]
          Length = 272

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L+V+ G   S  +A+R +++  +++  +I+      +       
Sbjct: 9   LLVERGLCPSRQQAQRLIRAGEVRVAQAIVDKPGSLVAEDAVIE 52


>gi|19551397|ref|NP_599399.1| hypothetical protein NCgl0144 [Corynebacterium glutamicum ATCC
           13032]
 gi|62389041|ref|YP_224443.1| hypothetical protein cg0184 [Corynebacterium glutamicum ATCC 13032]
 gi|145294270|ref|YP_001137091.1| hypothetical protein cgR_0226 [Corynebacterium glutamicum R]
 gi|21322911|dbj|BAB97540.1| Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032]
 gi|41324374|emb|CAF18714.1| CONSERVED HYPOTHETICAL PROTEIN [Corynebacterium glutamicum ATCC
           13032]
 gi|140844190|dbj|BAF53189.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 97

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 19/60 (31%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   I  A    S   A+  + +  + +N  + +     ++  D    G +    
Sbjct: 10  DETIKLGQFIKLANLVESGGAAKDAIANGDVTVNGEVDTRRGKTLRDGDVVCIGEVCAQV 69


>gi|315932679|gb|EFV11609.1| Tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           327]
          Length = 213

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 76/228 (33%), Gaps = 32/228 (14%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+   +    +    ++              
Sbjct: 1   MRVLTGLQPSGD-LHIGNYFGAIKQMVDAQEKS-QMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + ++L   +  F  +  + 
Sbjct: 46  SSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSD---VKEVMELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L A D +     +D ++   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMAADIL----LFDTQIVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTS 253
           ++        T P         ++    G KM K+    I +     +
Sbjct: 159 KVNNEWGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKT 206


>gi|154687141|ref|YP_001422302.1| YtzF [Bacillus amyloliquefaciens FZB42]
 gi|154352992|gb|ABS75071.1| YtzF [Bacillus amyloliquefaciens FZB42]
          Length = 239

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M L  L+  +GF  S  + ++ +K+ A+ I+     + K  +  +
Sbjct: 1   MRLDKLLANSGF-GSRKDVKKIVKAGAVMIDGEPAKDVKTHVDPE 44


>gi|81427941|ref|YP_394940.1| tryptophanyl-tRNA synthetase II [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609582|emb|CAI54628.1| Tryptophanyl--tRNA synthetase [Lactobacillus sakei subsp. sakei
           23K]
          Length = 338

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 49/177 (27%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G ++   ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYIGSLRNRVAMQDSGEYETFIMIADQQAL------TDNARDPEKIRNSLF 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 65  QVALDY----LSVGIDPAKTTVFVQSQIPALSELTMHYLNLVTVSRLQRNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
             ++     F    Y + QA D               G DQ   +    ++      
Sbjct: 121 NFEQSIPAGF--LIYPVSQAADITAFK----ATTVPVGDDQEPMLEQTREIVRTFNN 171


>gi|332799735|ref|YP_004461234.1| pseudouridine synthase Rsu [Tepidanaerobacter sp. Re1]
 gi|332697470|gb|AEE91927.1| pseudouridine synthase Rsu [Tepidanaerobacter sp. Re1]
          Length = 242

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +   +  ++   G   S  + ++ +KS  + IN  II++    +   
Sbjct: 4   QKPARIDKILASCG-YGSRKDVKKLIKSGQVSINGVIINDAGTLVNPS 50


>gi|291533602|emb|CBL06715.1| Ribosomal protein S4 and related proteins [Megamonas hypermegale
           ART12/1]
          Length = 125

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 21/50 (42%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +  ++ + G A++  +AR+ +    I +N   +      IK+ D      
Sbjct: 17  IDNVVFRLGLASTRRQARQLVSHGHITVNGKRLDIPSALIKVGDVIGVKE 66


>gi|222086166|ref|YP_002544698.1| tryptophanyl-tRNA synthetase protein [Agrobacterium radiobacter
           K84]
 gi|221723614|gb|ACM26770.1| tryptophanyl-tRNA synthetase protein [Agrobacterium radiobacter
           K84]
          Length = 339

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 57/229 (24%), Gaps = 25/229 (10%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+    ++         +        ++ N+
Sbjct: 17  PTGP-LHLGHYAGSLRNRVALQHSHRQYLLLADTQAL---------TDNADDPDRVRRNV 66

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++       +     +T   + +    L  +  + L          N  +  E      
Sbjct: 67  LEVAF-DYLAVGIDPAETTICLQSALPALAELTLLYLNFVTVGRLERNPTIKTEIQLRGF 125

Query: 164 KREQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDLG-E 214
           +R+    F    Y + QA D                    Q     +  N   G ++  E
Sbjct: 126 ERDIPAGF--LCYPVSQAADITAFKATIVPVGEDQAPLIEQTNEIVRRLNRQVGREILFE 183

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                        +       KM K+   AI L+               
Sbjct: 184 AEAMIPAVGRLPGV---DGKAKMSKSQGNAIPLSASPDDIREAVLRMYT 229


>gi|222529211|ref|YP_002573093.1| pseudouridine synthase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456058|gb|ACM60320.1| pseudouridine synthase [Caldicellulosiruptor bescii DSM 6725]
          Length = 233

 Score = 37.4 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLSF 406
           M L   +   GF  S ++ ++ ++   + +N   I     +I  ++          K S 
Sbjct: 1   MRLDKFLTHCGF-GSRSQVKKLIREGIVTVNGKQIVEVDFKINPEEDIIEVDGRVAKFSK 59


>gi|229918448|ref|YP_002887094.1| tryptophanyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469877|gb|ACQ71649.1| tryptophanyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 333

 Score = 37.4 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 78/234 (33%), Gaps = 21/234 (8%)

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +     +  +      + + +  +++    F Y  L A D +     Y+  L   G DQ
Sbjct: 92  MLTCIAGMGELGRMTQYKDKSQGSENVGAGLFVYPTLMASDIL----LYNTELVPVGDDQ 147

Query: 203 WGNIICGIDLGERLKTP--KLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEM 251
             +I    DL ER      + F +  PL+               KM K+ + A      +
Sbjct: 148 KQHIELTRDLAERFNKRYYETFTIPEPLIQKEGARIMSLTNPVKKMSKSDTNAKGYISML 207

Query: 252 TSPYNFWQYWRN--IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
             P    +  ++   D + V+SF +       + ++  +   G  I++   ++     + 
Sbjct: 208 DEPNVIRKKIKSAVTDSSGVISFDRENKPGISNLLEIYSLSTGTPIDD---LVKQYENSN 264

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
               ++    A  A+     + + + + +  +  + +  G      +     A 
Sbjct: 265 YGTFKQDVAEAVVALLEPIQARYHELIDSPELD-EILDAGRAKAEAVANKNLAK 317


>gi|225870034|ref|YP_002745981.1| hypothetical protein SEQ_0625 [Streptococcus equi subsp. equi 4047]
 gi|225699438|emb|CAW92932.1| conserved hypothetical protein [Streptococcus equi subsp. equi
           4047]
          Length = 264

 Score = 37.4 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----TGNIKL 404
           +  ++      S N+A R +++  +K+N  +++     + + D  S         L
Sbjct: 188 VDRLIATVLKQSRNQAIRLVEAGKVKVNYQLVTKASQPVAVGDLISIRGYGRFSIL 243


>gi|167040440|ref|YP_001663425.1| pseudouridine synthase [Thermoanaerobacter sp. X514]
 gi|300913725|ref|ZP_07131042.1| pseudouridine synthase [Thermoanaerobacter sp. X561]
 gi|307723259|ref|YP_003903010.1| pseudouridine synthase [Thermoanaerobacter sp. X513]
 gi|166854680|gb|ABY93089.1| pseudouridine synthase [Thermoanaerobacter sp. X514]
 gi|300890410|gb|EFK85555.1| pseudouridine synthase [Thermoanaerobacter sp. X561]
 gi|307580320|gb|ADN53719.1| pseudouridine synthase [Thermoanaerobacter sp. X513]
          Length = 240

 Score = 37.4 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M +  L+   G   +  E ++ +K   + +N + + +  L I  +  +      L  GKK
Sbjct: 4   MRIDKLLSNIGI-GTRKEVKKFIKEGLVLVNGNTVKDAGLIINTETDE-----ILFDGKK 57

Query: 410 NHII 413
            +  
Sbjct: 58  IYYK 61


>gi|332879122|ref|ZP_08446823.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682922|gb|EGJ55818.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 322

 Score = 37.4 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 72/251 (28%), Gaps = 27/251 (10%)

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
           +G                  +  +L   +  FF   R+    S + ++   Q ++   F 
Sbjct: 70  FGLDTNKVTFYRQSD---VPQTAELSWYLSCFFPYQRLTLAHSFKDKMDYLQDVNAGLFT 126

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP-------- 227
           Y +L A D +     YD  +   G DQ  ++    D+  R           P        
Sbjct: 127 YPMLMAADIL----LYDAEVVPVGKDQLQHLEITRDVASRFNHQMGETFVLPQAKIEERI 182

Query: 228 -LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-----------IDDADVVSFAKR 275
            ++    G KM K+    I +              +                 +  +   
Sbjct: 183 MIIPGTDGEKMSKSRHNFINIFLPEKQLRKQVMSIQTDSTPLEDPKDPTTCNVMKLYRLL 242

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            T   + +I+ + +  G    +AK+ +   I        E      A ++  D  +    
Sbjct: 243 ATDDQVQQIEALYRAGGYGYGQAKQALYELILEQFATPRERYAYFMAHLDELDAILKEGA 302

Query: 336 MPTISISKDEV 346
                ++ + +
Sbjct: 303 AKAHKVADETL 313


>gi|254502639|ref|ZP_05114790.1| conserved hypothetical protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222438710|gb|EEE45389.1| conserved hypothetical protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 498

 Score = 37.4 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             +  +   P ++I   + + G  +  ++ +AG   S  EA   +    +++N  +++  
Sbjct: 39  SKADEAGDAPRVTIP--DTASGERIAKVMARAGLC-SRREAETWVMDGRVEVNGKVLTTP 95

Query: 388 KLQIKLQD 395
            + +   D
Sbjct: 96  AVTVTSND 103


>gi|217966542|ref|YP_002352048.1| RNA-binding S4 domain protein [Dictyoglomus turgidum DSM 6724]
 gi|217335641|gb|ACK41434.1| RNA-binding S4 domain protein [Dictyoglomus turgidum DSM 6724]
          Length = 243

 Score = 37.4 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M L   +V  GF  S  E ++ +K+  + +NN  + +    I  +
Sbjct: 1   MRLDKFLVNQGF-GSRKEVQKLIKAGIVYVNNFPVEDPSFHINPE 44


>gi|114705781|ref|ZP_01438684.1| High mobility group proteins HMG-I and HMG-Y:Pseudouridine
           synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Fulvimarina pelagi HTCC2506]
 gi|114538627|gb|EAU41748.1| High mobility group proteins HMG-I and HMG-Y:Pseudouridine
           synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Fulvimarina pelagi HTCC2506]
          Length = 639

 Score = 37.4 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           M +   + +AG A S  +A   +    +K+N  II +  L +K  D        L
Sbjct: 184 MRIARRLARAGIA-SRRDAEAMIVDGRVKVNGKIIDSPALDVKPTDRIEVDGALL 237


>gi|325846376|ref|ZP_08169345.1| S4 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481560|gb|EGC84600.1| S4 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 69

 Score = 37.4 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNS 382
            L+     A S  EA+  +K   I +N  
Sbjct: 15  DLLKATDIAQSGGEAKHLIKEYGILVNGE 43


>gi|167044027|gb|ABZ08712.1| putative tRNA synthetases class I (W and Y) [uncultured marine
           crenarchaeote HF4000_APKG4H17]
          Length = 369

 Score = 37.4 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  RG      +  R LD          Y G   +  + H GHL   +   WLQ 
Sbjct: 49  MLRRGIFFSHRDLNRLLDDYEKGKKFFLYTGRGPSGHT-HIGHLVPWVFAKWLQD 102


>gi|124004166|ref|ZP_01689012.1| ribosomal large subunit pseudouridine synthase B [Microscilla
           marina ATCC 23134]
 gi|123990236|gb|EAY29735.1| ribosomal large subunit pseudouridine synthase B [Microscilla
           marina ATCC 23134]
          Length = 391

 Score = 37.4 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              M L   I  +G   S  EA + ++   I +N  +I+    Q+   D    G   L  
Sbjct: 156 PEKMRLNRFISNSGVC-SRREADKLIEMGMISVNGKVITEMGFQVSPTDTVKYGKRLLKR 214


>gi|91776879|ref|YP_546635.1| pseudouridine synthase, Rsu [Methylobacillus flagellatus KT]
 gi|91710866|gb|ABE50794.1| Pseudouridine synthase, Rsu [Methylobacillus flagellatus KT]
          Length = 380

 Score = 37.4 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 20/56 (35%), Gaps = 9/56 (16%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDFDSTGNIK 403
           + + G   S  EA   + +  +K+N  ++         + K+++  +         
Sbjct: 147 MAELGLC-SRREADEFIANGWVKVNGEVVDVLGTRVAPDAKIEVSKEAHQHQAETV 201


>gi|295398585|ref|ZP_06808617.1| ribosomal large subunit pseudouridine synthase B [Aerococcus
           viridans ATCC 11563]
 gi|294973186|gb|EFG48981.1| ribosomal large subunit pseudouridine synthase B [Aerococcus
           viridans ATCC 11563]
          Length = 240

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L  ++  AG   S  E+ + + +  +K+N  ++     ++   D   
Sbjct: 4   LQKVMAHAG-VASRRESEKLIAAGRVKVNGEVVRELGYKVSNNDRIE 49


>gi|225867942|ref|YP_002743890.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           equi subsp. zooepidemicus]
 gi|225871142|ref|YP_002747089.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           equi subsp. equi 4047]
 gi|225700546|emb|CAW95028.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           equi subsp. equi 4047]
 gi|225701218|emb|CAW98156.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           equi subsp. zooepidemicus]
          Length = 240

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I  AG A S  +A   +K   + +N  +I++    +K  D   
Sbjct: 7   IAHAGLA-SRRKAEELIKRGLVTLNGQVITDLATTVKSGDLVE 48


>gi|218259522|ref|ZP_03475235.1| hypothetical protein PRABACTJOHN_00893 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225053|gb|EEC97703.1| hypothetical protein PRABACTJOHN_00893 [Parabacteroides johnsonii
           DSM 18315]
          Length = 201

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            LI  +G   S  EA + ++   + +N S +     ++   D     +I++  GK
Sbjct: 7   KLISDSGLC-SRREADKFIEEGRVTVNGS-LPQVGQKVTEGDIVMLDDIQVKIGK 59


>gi|226321166|ref|ZP_03796707.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233458|gb|EEH32198.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 351

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 32/222 (14%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS----------INT 58

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVR 160
               ++ +   ++  G       +          +   +   I +   + R+    +   
Sbjct: 59  IPSNVREMVLDYLACGINPDKVSIYLQSAIPELFELHLIFSMIVTVARLQRIPSIKDMSI 118

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +   +E         Y +L + D +         L   G D   +I    +L  R     
Sbjct: 119 AAGLKEIPYGL--LGYPVLMSADILMTK----ANLVPVGRDNESHIEFTRELARRFNHLY 172

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                     +F  + PL+      KM K+L+ AI+LN +  
Sbjct: 173 KNNFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDDEN 214


>gi|195941745|ref|ZP_03087127.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|216264531|ref|ZP_03436523.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218249523|ref|YP_002374539.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|221217479|ref|ZP_03588950.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223889097|ref|ZP_03623686.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224533926|ref|ZP_03674511.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225549727|ref|ZP_03770692.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|226322080|ref|ZP_03797605.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|215981004|gb|EEC21811.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218164711|gb|ACK74772.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|221192757|gb|EEE18973.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223885346|gb|EEF56447.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224512929|gb|EEF83295.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225369687|gb|EEG99135.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|226232670|gb|EEH31424.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|312148318|gb|ADQ30977.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 351

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 32/222 (14%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS----------INT 58

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVR 160
               ++ +   ++  G       +          +   +   I +   + R+    +   
Sbjct: 59  IPSNVREMVLDYLACGINPDKVSIYLQSAIPELFELHLIFSMIVTVARLQRIPSIKDMSI 118

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +   +E         Y +L + D +         L   G D   +I    +L  R     
Sbjct: 119 AAGLKEIPYGL--LGYPVLMSADILMTK----ANLVPVGRDNESHIEFARELARRFNHLY 172

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                     +F  + PL+      KM K+L+ AI+LN +  
Sbjct: 173 KNNFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDDEN 214


>gi|227534106|ref|ZP_03964155.1| group 1 glycosyl transferase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227188213|gb|EEI68280.1| group 1 glycosyl transferase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 386

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 48/197 (24%), Gaps = 12/197 (6%)

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  GH    L         DP  R  +       +  + I     I  SF  +      
Sbjct: 32  LQAAGHDVTIL-----GWREDPHGRMTTDTFDFDGQTLKAIFTGIKISYSFKYFKVFAFM 86

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
                   WL    +     +  +  +   + S   V  + K +      ++        
Sbjct: 87  RFEAFLYRWLSKHLHEYDAVQACNVHT-GYITSK--VAKKTKTKLVYDIFDYAPDTRNYP 143

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA----SGTKMG 238
           ++      +   + M  +D                 P+  A+       +    +     
Sbjct: 144 EWYRKMVVHWENVTMATADWTLICSEDRRRQIEPAKPQHLAVIYNSPLDSPVATNAEAFD 203

Query: 239 KTLSGAIWLNKEMTSPY 255
            T      +     SPY
Sbjct: 204 PTQKDFKIVYIGGLSPY 220


>gi|225850762|ref|YP_002730996.1| 30S ribosomal protein S4 [Persephonella marina EX-H1]
 gi|254764604|sp|C0QQQ0|RS4_PERMH RecName: Full=30S ribosomal protein S4
 gi|225645002|gb|ACO03188.1| ribosomal protein S4 [Persephonella marina EX-H1]
          Length = 205

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++   + G  LL L+ +         GFA +  +AR+ ++     +N   +     ++
Sbjct: 77  EAARSAGNTGQILLQLLERRLDNVVYRLGFAKTRRQARQLVRHGHFLVNGRKVDIPSYRV 136

Query: 392 KLQDFDSTGN 401
              D      
Sbjct: 137 DPGDIIELRE 146


>gi|157414683|ref|YP_001481939.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157385647|gb|ABV51962.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747323|gb|ADN90593.1| Tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 319

 Score = 37.4 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 36/323 (11%), Positives = 94/323 (29%), Gaps = 41/323 (12%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+   +    +    ++              
Sbjct: 1   MRVLTGLQPSGD-LHIGNYFGAIKQMVDAQEKS-QMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + ++L   +  F  +  + 
Sbjct: 46  SSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSD---VKEVMELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L A D +     +D ++   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMAADIL----LFDTQIVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           ++        T P         ++    G KM K+    I +       ++  +  +   
Sbjct: 159 KVNNEWGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTIDI-------FSSEKTLKKQI 211

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA--TEITTMVHGREEAEKAATAA 323
            + V               +     +       +K +    E     +G  +        
Sbjct: 212 SSIVTDSTALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKMYLNELVN 271

Query: 324 MECFDMSIHSQHMPTISISKDEV 346
               +       +        E+
Sbjct: 272 AYFKEAREKYNELLEKPSHLKEI 294


>gi|288871915|dbj|BAI70601.1| ribosomal protein S4 [Heterosigma akashiwo]
          Length = 268

 Score = 37.4 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++ + GF  S +++R+ +    + +N   ++     +K  D   
Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIE 164


>gi|225552425|ref|ZP_03773365.1| tryptophanyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371423|gb|EEH00853.1| tryptophanyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 351

 Score = 37.4 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 44/360 (12%), Positives = 98/360 (27%), Gaps = 41/360 (11%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS----------IGT 58

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVR 160
               ++ +   ++  G       +          +   +   I +   + R+    +   
Sbjct: 59  IPSNVREMVLDYLACGINPDKVSIYLQSAIPELFELHLIFSMIVTVARLQRIPSIKDMSI 118

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +   +E         Y +L + D +         L   G D   +I    +L  R     
Sbjct: 119 AAGLKEIPYGL--LGYPVLMSADILMTK----ANLVPVGRDNESHIEFARELARRFNHLY 172

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
                     +F  + PL+      KM K+L+ AI+LN +               +    
Sbjct: 173 KNNFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDDENLLEKKIMSMYTDPNRIRA 232

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                +   P+           +E+ + K          V  +++   A  + ++     
Sbjct: 233 DIPGNVEGNPVFIYHSFFNGNHEEVEDLKSRYKKGKVGDVEVKKKLFLALNSFLKPIRDK 292

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK--INNSIISNEK 388
                        + +  G       V         + +  +    +    N    S EK
Sbjct: 293 RSFYEAKKKDYIDEIIFDGTSKAR-FVANKVVK---DVKDLI---GLSKTWNGIKYSAEK 345


>gi|315161601|gb|EFU05618.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0645]
          Length = 334

 Score = 37.4 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNARNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|256752686|ref|ZP_05493537.1| pseudouridine synthase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748448|gb|EEU61501.1| pseudouridine synthase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 240

 Score = 37.4 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M +  L+   G   +  E ++ +K   + +N + + +  L I  +  +      L  GKK
Sbjct: 4   MRIDKLLSNIGI-GTRKEVKKFIKEGLVLVNGNTVKDAGLIINTETDE-----ILFDGKK 57

Query: 410 NHII 413
            +  
Sbjct: 58  IYYK 61


>gi|255348967|ref|ZP_05380974.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503506|ref|ZP_05381896.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507184|ref|ZP_05382823.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
          Length = 346

 Score = 37.4 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 33/245 (13%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESR 91
                  G   T   LH GH    +M    LQ  + +    ++    ++        ++R
Sbjct: 2   KKKRVLTGDRPTGK-LHLGHWIGSIMSRLQLQNDSRYDCFFIIADLHTL------TTKTR 54

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +    Q        I  + + ++  G     + +          +  +L         +N
Sbjct: 55  KEEVLQIDNH----IYDVLADWLSVGIDPEKSAIYLQSAI---PEIYELNLIFSMLTPLN 107

Query: 152 RMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            ++      E  R+    E+SLS     Y +LQ+ D +         L   G D   ++ 
Sbjct: 108 HIMGIPSIKEMARNASLNEESLSHGLIGYPVLQSADIL----LAKAHLVPVGKDNEAHVE 163

Query: 208 CGIDLGERLK--TPKLF-------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
              D+ +       ++F          + L+ T    KM K+ + AI+L+ +  +     
Sbjct: 164 LTRDIAKTFNRLYGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKI 223

Query: 259 QYWRN 263
           +    
Sbjct: 224 RKLYT 228


>gi|291280122|ref|YP_003496957.1| 30S ribosomal protein S4 [Deferribacter desulfuricans SSM1]
 gi|290754824|dbj|BAI81201.1| 30S ribosomal protein S4 [Deferribacter desulfuricans SSM1]
          Length = 208

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+ +        +GFA S  EAR+ ++ N   +N   ++      K  D     
Sbjct: 89  GENLLQLLERRLDNVVYRSGFARSRKEARQLIRHNHFLVNGRKVNIPSFLCKEGDVVEVK 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|288560866|ref|YP_003424352.1| rRNA methylase [Methanobrevibacter ruminantium M1]
 gi|288543576|gb|ADC47460.1| rRNA methylase [Methanobrevibacter ruminantium M1]
          Length = 264

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V      S  +++  +KS  +K+N+ II+     ++  D
Sbjct: 9   LVNNNLIASRTKSKEMIKSKNVKVNDKIITKASYTVRDGD 48


>gi|225175647|ref|ZP_03729641.1| ribosomal protein S4 [Dethiobacter alkaliphilus AHT 1]
 gi|225168976|gb|EEG77776.1| ribosomal protein S4 [Dethiobacter alkaliphilus AHT 1]
          Length = 209

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA S  EAR+ +K     +N   +     Q++  D
Sbjct: 109 GFALSRPEARQLVKHGHFTVNGRKVDIPSYQVRPDD 144


>gi|85717175|ref|ZP_01048133.1| pseudouridine synthase, Rsu [Nitrobacter sp. Nb-311A]
 gi|85696008|gb|EAQ33908.1| pseudouridine synthase, Rsu [Nitrobacter sp. Nb-311A]
          Length = 635

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  +I +AG A S  +A   +    + +N  +I++  L +  +D  
Sbjct: 306 KAGERVAKVISRAGLA-SRRDAEEWVTQGRVAVNGRVINSPALDVTSRDVI 355


>gi|325286328|ref|YP_004262118.1| tryptophanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321782|gb|ADY29247.1| tryptophanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 322

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 78/302 (25%), Gaps = 32/302 (10%)

Query: 50  HAGHLT-QLMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G++   +M    +     ++    +    S+    +   E  R          +    
Sbjct: 15  HLGNILGAIMPAIEMANDPKNESFLFIADMHSLTQIKNG--EELRNNTYAVAATWLAFGL 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I  +       ++D       +W            +  FF   R+    S + +  R +
Sbjct: 73  DIEKTVF---YRQSDVPQTTELSWY-----------LSCFFPYQRLTLAHSFKDKADRLE 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y +L A D +     YD  +   G DQ  ++    D+  R           P
Sbjct: 119 DVNAGLFTYPMLMAADIL----LYDAEIVPVGKDQMQHLEITRDVASRFHAQLGETFVLP 174

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                     +    GTKM K+    I L +               D   +         
Sbjct: 175 QGKVQEESKFIPGTDGTKMSKSKGNLINLFQTDKKLRKQIMG-IQTDSTPMEDPKDPEGD 233

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                   +A  +  +   AK                       A      + +  ++  
Sbjct: 234 NVFELYKILATTEQVDEMRAKYKGGNYGYGHAKQELFELIIDKFADAREKYNYYMNNLDE 293

Query: 339 IS 340
           I 
Sbjct: 294 ID 295


>gi|301066980|ref|YP_003789003.1| glycosyl transferase, group 1 [Lactobacillus casei str. Zhang]
 gi|300439387|gb|ADK19153.1| glycosyl transferase, group 1 [Lactobacillus casei str. Zhang]
          Length = 396

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 48/197 (24%), Gaps = 12/197 (6%)

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  GH    L         DP  R  +       +  + I     I  SF  +      
Sbjct: 42  LQAAGHDVTIL-----GWREDPHGRMTTDTFDFDGQTLKAIFTGIKISYSFKYFKVFAFM 96

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
                   WL    +     +  +  +   + S   V  + K +      ++        
Sbjct: 97  RFEAFLYRWLSKHLHEYDAVQACNVHT-GYITSK--VAKKTKTKLVYDIFDYAPDTRNYP 153

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA----SGTKMG 238
           ++      +   + M  +D                 P+  A+       +    +     
Sbjct: 154 EWYRKMVVHWENVTMATADWTLICSEDRRRQIEPAKPQHLAVIYNSPLDSPVATNAEAFD 213

Query: 239 KTLSGAIWLNKEMTSPY 255
            T      +     SPY
Sbjct: 214 PTQKDFKIVYIGGLSPY 230


>gi|295698627|ref|YP_003603282.1| ribosomal protein S4 [Candidatus Riesia pediculicola USDA]
 gi|291157482|gb|ADD79927.1| ribosomal protein S4 [Candidatus Riesia pediculicola USDA]
          Length = 206

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 24/49 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            ++ + G  ++ +EAR+ +   +I +N  I++    Q+ + D   T   
Sbjct: 100 NVVYRIGLGSTRSEARQLVSHKSILVNKKIVNIPSYQVNIDDIIETSEF 148


>gi|223043737|ref|ZP_03613780.1| YlmH protein [Staphylococcus capitis SK14]
 gi|222442834|gb|EEE48936.1| YlmH protein [Staphylococcus capitis SK14]
          Length = 262

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----TGNIKLSFG---KK 409
            S N A++ ++   +K+N++II     Q++  D  S         +  G   KK
Sbjct: 197 KSRNIAKQLIEKKRVKVNHTIIDTPDFQLEQNDLLSIQGFGRAQIIQIGGRTKK 250


>gi|254509192|ref|ZP_05121290.1| ribosomal large subunit pseudouridine synthase F [Vibrio
           parahaemolyticus 16]
 gi|219547897|gb|EED24924.1| ribosomal large subunit pseudouridine synthase F [Vibrio
           parahaemolyticus 16]
          Length = 345

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             I + GF  S  EA R ++   + IN  +
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGQV 39


>gi|254458704|ref|ZP_05072128.1| tryptophanyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084470|gb|EDZ61758.1| tryptophanyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 321

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 99/346 (28%), Gaps = 48/346 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +  + G   +   LH G+    +  +   QK   +  + +    +               
Sbjct: 1   MRVFTGIQPSGD-LHIGNYFGSIKQMVDAQK-DSETFAFIANYHAQ-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
              + +   E      + F+  G     +            + ++L   + SF  +  + 
Sbjct: 46  SVNDGKRLAELTMQCATDFLALGIDPNKSTFWVQSD---VKEVLELYWVLSSFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + +  R Q+ +   F+Y +L A D +     +   +   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKTARGQATNHSLFSYPVLMAADIL----LFSSDVVPVGKDQIQHVEIARDIAT 158

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP-YNFWQYWRNIDDADVVSFA 273
           +        L  P        ++ + +     ++ +  S  Y         + A + +  
Sbjct: 159 KFNNQYGDILVMP------EFRVQEDVQTVPGIDGQKMSKSYGNIVNIFGEEKAQMKTIK 212

Query: 274 KRLTTL-PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           K +T    M E            N AK  +  +    +  R +         + +   + 
Sbjct: 213 KIVTENVAMEEPKEFENC--NVYNMAKLFLEGDNLIALQNRYKNGGEGHGHFKIYLGEVM 270

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
            ++       +    +                  E R  L   A+K
Sbjct: 271 WEYFREYREKRAYYEKNQD---------------EVREILNMGAVK 301


>gi|29376735|ref|NP_815889.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis V583]
 gi|227517126|ref|ZP_03947175.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis TX0104]
 gi|227555280|ref|ZP_03985327.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis HH22]
 gi|257419781|ref|ZP_05596775.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|29344200|gb|AAO81959.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227075440|gb|EEI13403.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis TX0104]
 gi|227175602|gb|EEI56574.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis HH22]
 gi|257161609|gb|EEU91569.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|315574672|gb|EFU86863.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0309B]
 gi|315581022|gb|EFU93213.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0309A]
          Length = 334

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNARNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|88810632|ref|ZP_01125889.1| tryptophanyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88792262|gb|EAR23372.1| tryptophanyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 406

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 19/179 (10%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH   ++     LQ+  H+    +    ++                 E 
Sbjct: 15  GMRPTGR-LHLGHYHGVLKNWVQLQQE-HECFFFVADWHAL------------TTAYDER 60

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +   E I  +   ++  G   + A +      +   +   LL  I     + R+ +++  
Sbjct: 61  EIIGENIWDLVIDWLACGVNPSLAKIFIQSRVIEHAELHVLLSMIAPLGWLERVPTYKDQ 120

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +  L+ +  L++    Y +LQ+ D + + +     +   G DQ  ++    +L  R   
Sbjct: 121 QKNLRDKDLLTYGFLGYPVLQSADIL-IYQASAVPV---GEDQVSHVELTRELARRFNY 175


>gi|239811660|gb|ACS27147.1| ribosomal protein S4 [Heterosigma akashiwo]
          Length = 268

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++ + GF  S +++R+ +    + +N   ++     +K  D   
Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIE 164


>gi|260776566|ref|ZP_05885461.1| ribosomal large subunit pseudouridine synthase F [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607789|gb|EEX34054.1| ribosomal large subunit pseudouridine synthase F [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 344

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             I + GF  S  EA R ++   + IN  +       +   D
Sbjct: 10  KFISETGFC-SRREADRLIEQGRVTINGKVPEMGTKVLPGDD 50


>gi|168335041|ref|ZP_02693154.1| 30S ribosomal protein S4 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 196

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           M L  ++ + GFA ST +AR+ +      IN   +      +K  D  +   
Sbjct: 88  MRLDNIVYRMGFARSTRQARQMVNHGHFLINGQKVDRPSYALKEGDTITLKE 139


>gi|166711380|ref|ZP_02242587.1| hypothetical protein Xoryp_07925 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 80

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 26/67 (38%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           S+  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+       
Sbjct: 3   SLEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQL 62

Query: 400 GNIKLSF 406
             +++  
Sbjct: 63  DGVEIRV 69


>gi|119952811|ref|YP_945020.1| tryptophanyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861582|gb|AAX17350.1| tryptophanyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 351

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 94/333 (28%), Gaps = 41/333 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    ++     +  ++   ++    ++   P  +  +   +  +E+    
Sbjct: 12  PTG-SLHLGHYIGSIVNRLKYQEEYETYIIIADLHTLTTKPDLKSINEISVNVREM---- 66

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVRSR 162
                    ++  G       +         ++   +L  I     + R+    +   + 
Sbjct: 67  ------VLDYLACGINPEKVNIYLQSAIPELLELNLILSMIVMVNRLQRIPSIKDMSVAA 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
              E         Y +L + D +         L   G D   +I    +L  +       
Sbjct: 121 GLSEVPYGL--LGYPVLMSADILMTK----ANLVPVGRDNEAHIELTRELARKFNYLYGD 174

Query: 219 -----PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR----------- 262
                  +F  +  L+      KM K+L  AI+L+ +  S                    
Sbjct: 175 FFPIPEAIFTDSQALVGIYGKAKMSKSLGNAIFLSDDEKSLRKKVMSMFTDPKRVRADIP 234

Query: 263 -NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKA 319
             +D   V  +     +      +   + +   I   E K+ +   +   +    E  K 
Sbjct: 235 GEVDGNPVFIYHDLFNSNVDELYEFKTRYRKGTIGDVEVKERLFEVLNQFLIPIRERRKF 294

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
             A     D  I      T  ++ + +     L
Sbjct: 295 FEAKKGYIDEIIFEGTSKTRKVAIEVIKNAKNL 327


>gi|15889714|ref|NP_355395.1| ribosomal large subunit pseudouridine synthase D [Agrobacterium
           tumefaciens str. C58]
 gi|15157624|gb|AAK88180.1| ribosomal large subunit pseudouridine synthase, RluD subfamily
           [Agrobacterium tumefaciens str. C58]
          Length = 340

 Score = 37.4 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I+ ++    +  + L+ + G   S +  +  ++  A+ +N   ++  K ++   D
Sbjct: 16  IAGEDAEGRID-VWLVGEVGSDLSRSRLKALIEQGAVLLNGQPVTEPKKKVHPGD 69


>gi|261252238|ref|ZP_05944811.1| ribosomal large subunit pseudouridine synthase F [Vibrio orientalis
           CIP 102891]
 gi|260935629|gb|EEX91618.1| ribosomal large subunit pseudouridine synthase F [Vibrio orientalis
           CIP 102891]
          Length = 344

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             I + GF  S  EA R ++   + IN  +
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGQV 39


>gi|251781834|ref|YP_002996136.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390463|dbj|BAH80922.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323126647|gb|ADX23944.1| hypothetical protein SDE12394_02010 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 240

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  II++    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQIITDLATTVKSGD 45


>gi|217967433|ref|YP_002352939.1| hemolysin A [Dictyoglomus turgidum DSM 6724]
 gi|217336532|gb|ACK42325.1| hemolysin A [Dictyoglomus turgidum DSM 6724]
          Length = 271

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK--LSFG----K 408
           L+VK GF  S  +AR  + +  +K+N +++    L+I +            +S G    K
Sbjct: 10  LLVKRGFFESREKARAAVIAGIVKVNGNVVIKPDLKIPIDSLIEIKENIPYVSKGGFKLK 69

Query: 409 K 409
           K
Sbjct: 70  K 70


>gi|54296389|ref|YP_122758.1| 30S ribosomal protein S4 [Legionella pneumophila str. Paris]
 gi|61215409|sp|Q5X835|RS4_LEGPA RecName: Full=30S ribosomal protein S4
 gi|53750174|emb|CAH11566.1| 30S ribosomal subunit protein S4 [Legionella pneumophila str.
           Paris]
          Length = 206

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA++  EAR+ +   AI +N+ +++     +   D  S
Sbjct: 106 GFASTRAEARQLVAHKAILVNDKVVNVPSFLVNPGDTIS 144


>gi|308070661|ref|YP_003872266.1| tryptophanyl-tRNA synthetase (tryptophan--tRNA ligase)
           [Paenibacillus polymyxa E681]
 gi|305859940|gb|ADM71728.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase)
           [Paenibacillus polymyxa E681]
          Length = 329

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 71/237 (29%), Gaps = 34/237 (14%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   L  G+    M     LQ+  H+   ++    +             +   QE 
Sbjct: 7   GIQPSGQ-LTLGNYIGAMKNFVKLQE-DHQCYFMVVDLHA-------------ITVPQEP 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +  E+ + + + FI  G     + +          +   L+  + +   + RM      
Sbjct: 52  AQLREQSEAVAALFIAAGINPEKSNVFLQSHVPQHAELGWLMTTLTNMGELERMTQ---F 108

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LK 217
           + +   + S+    F Y  L A D +     Y+  L   G DQ  ++    DL  R   +
Sbjct: 109 KDKAAGKDSVGAGLFVYPSLMAADIL----LYNADLVPVGDDQKQHLELTRDLAGRFNHR 164

Query: 218 TPKLFALTSPLL---------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
               F +  P +               KM K+   A      +  P    +      
Sbjct: 165 YGDYFTVPEPYIPEVGARIMSLDDVSKKMSKSNPNAGSFIALLDEPKVIRKKISRAT 221


>gi|228472245|ref|ZP_04057011.1| ribosomal protein S4 [Capnocytophaga gingivalis ATCC 33624]
 gi|228276448|gb|EEK15172.1| ribosomal protein S4 [Capnocytophaga gingivalis ATCC 33624]
          Length = 201

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G A S   AR+ +    I +N  +++     +K  D   
Sbjct: 103 GIAPSRRAARQLVSHRHITVNGEVVNIPSYSLKPGDIVG 141


>gi|167044076|gb|ABZ08760.1| putative tRNA synthetases class I (W and Y) [uncultured marine
           crenarchaeote HF4000_APKG5B22]
          Length = 369

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 12  LSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  RG      +  R LD          Y G   +  + H GHL   +   WLQ 
Sbjct: 49  MLRRGIFFSHRDLNRLLDDYEKGKKFFLYTGRGPSGHT-HIGHLVPWVFAKWLQD 102


>gi|45359155|ref|NP_988712.1| tryptophanyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|45048030|emb|CAF31148.1| Tryptophanyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 358

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 74/247 (29%), Gaps = 32/247 (12%)

Query: 6   SDFLSILSE------RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM 58
           S+ +  L E      RG +    + +++    + G   T   G   +   +H GH   + 
Sbjct: 26  SEIVKTLKEPHNFMKRGIVFGHRDFQKIADAMNNGKDFTVVSGMMPSGK-MHFGHKMVVD 84

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L + QK G      +    +          +R M      +  IE      +++I  G 
Sbjct: 85  QLLYYQKYGADIYIPIADLEAY--------WARGMDFETTKKLAIE---EYITNYIALGL 133

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +        +    DL   +    +   M                +       +
Sbjct: 134 DPEKIHVYLQS---KNETVKDLAMRLSKRVNFTEMKGIYGFSGETNIGHVFA------PV 184

Query: 179 LQAYDFVE-LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL---LTTASG 234
           +Q  D +    +     +   G DQ  +I    D+  R K  K  A +S     +T   G
Sbjct: 185 VQVADILHPQLEKKVPVVVPVGIDQDPHIRLTRDIAGRYKDFKFIAPSSTYHRFITGLLG 244

Query: 235 TKMGKTL 241
            KM  + 
Sbjct: 245 GKMSSSK 251


>gi|317495715|ref|ZP_07954080.1| tryptophanyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914168|gb|EFV35649.1| tryptophanyl-tRNA synthetase [Gemella moribillum M424]
          Length = 338

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 56/199 (28%), Gaps = 22/199 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ         ++    ++         +      +++ +
Sbjct: 11  PTGK-LHLGHYVGSLKNRVALQNEKDTDIFIMIADQQAL---------TDNADNPEKVIQ 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           NI     +    +     K+   + +    L  +    +     S    N  +  E    
Sbjct: 61  NI-TEVALDYLAVGIDPTKSTVFIQSQIPQLAELYMYYMNLVTVSRLQRNPTVKQEINDK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
           +        F  F Y + QA D       +       G DQ   +    ++     R   
Sbjct: 120 KFGESIPAGF--FTYPVSQAADITAFKATH----VPVGEDQKPMLEQTREIVRDFNRTYN 173

Query: 219 PKLFALTSPLLTTASGTKM 237
            ++  L   +L   +  ++
Sbjct: 174 KEVLVLPEIVLPPKNHARL 192


>gi|257079543|ref|ZP_05573904.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294781471|ref|ZP_06746811.1| tryptophan--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270907|ref|ZP_07552194.1| tryptophan--tRNA ligase [Enterococcus faecalis TX4248]
 gi|256987573|gb|EEU74875.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294451459|gb|EFG19921.1| tryptophan--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306512820|gb|EFM81465.1| tryptophan--tRNA ligase [Enterococcus faecalis TX4248]
 gi|329569997|gb|EGG51752.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|224532574|ref|ZP_03673197.1| tryptophan--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512517|gb|EEF82895.1| tryptophan--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|312149318|gb|ADQ29389.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 351

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 32/222 (14%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 12  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS----------INT 58

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVR 160
               ++ +   ++  G       +          +   +   I +   + R+    +   
Sbjct: 59  IPSNVREMVLDYLACGINPDKVSIYLQSAIPELFELHLIFSMIVTVARLQRIPSIKDMSI 118

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +   +E         Y +L + D +         L   G D   +I    +L  R     
Sbjct: 119 AAGLKEIPYGL--LGYPVLMSADILMTK----ANLVPVGRDNESHIEFTRELARRFNHLY 172

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                     +F  + PL+      KM K+L+ AI+LN +  
Sbjct: 173 KNNFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDDEN 214


>gi|146329810|ref|YP_001210128.1| 30S ribosomal protein S4 [Dichelobacter nodosus VCS1703A]
 gi|172047329|sp|A5EX95|RS4_DICNV RecName: Full=30S ribosomal protein S4
 gi|146233280|gb|ABQ14258.1| 30S ribosomal protein S4 [Dichelobacter nodosus VCS1703A]
          Length = 206

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++  EAR+ +   AI++N   ++    Q++ +D  S   
Sbjct: 109 STRAEARQLVSHGAIEVNGQRVTIASYQVQAEDIVSVRE 147


>gi|313890897|ref|ZP_07824521.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120795|gb|EFR43910.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 240

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  +I++    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQVITDLATLVKSSD 45


>gi|163803577|ref|ZP_02197444.1| pseudouridine synthase family 1 protein [Vibrio sp. AND4]
 gi|159172619|gb|EDP57476.1| pseudouridine synthase family 1 protein [Vibrio sp. AND4]
          Length = 383

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNS 382
             I + GF  S  EA R ++   + IN  
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGQ 38


>gi|239811700|gb|ACS27186.1| ribosomal protein S4 [Heterosigma akashiwo]
          Length = 268

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++ + GF  S +++R+ +    + +N   ++     +K  D   
Sbjct: 121 ILYRTGFVKSLSQSRQLISHKKVSVNKHFLTQPNFLVKKGDLIE 164


>gi|302382584|ref|YP_003818407.1| RNA-binding S4 domain protein [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193212|gb|ADL00784.1| RNA-binding S4 domain protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 251

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +      +   + ++G   S  EA   +    + I+  ++++   +I+  
Sbjct: 8   DGPEPSRINKWLGQSGVC-SRREADALIADGLVSIDGEVVTDAGRKIEPG 56


>gi|226360073|ref|YP_002777851.1| pseudouridine synthase [Rhodococcus opacus B4]
 gi|226238558|dbj|BAH48906.1| pseudouridine synthase [Rhodococcus opacus B4]
          Length = 350

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             GM L  ++ +AG   S   A   +    ++++  I+  + L+I  ++
Sbjct: 107 GDGMRLQKVLAQAG-VASRRAAEELISQGRVEVDGRIVIEQGLRIDPEN 154


>gi|145639224|ref|ZP_01794831.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae PittII]
 gi|145271786|gb|EDK11696.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae PittII]
 gi|309750799|gb|ADO80783.1| 16S RNA U516 pseudouridine synthase [Haemophilus influenzae R2866]
          Length = 232

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G     ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 10  NTGLT--RSQATKAIRQSAVKINGEIVKSGSVQISQED 45


>gi|297559952|ref|YP_003678926.1| pseudouridine synthase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844400|gb|ADH66420.1| pseudouridine synthase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 694

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V  G+ L   +  AG   S   +   + +  + ++  ++     ++  +
Sbjct: 452 DVENGIRLQKALAAAG-VASRRASEEMIAAGRVSVDGQVVRRFGARVDPE 500


>gi|197117349|ref|YP_002137776.1| 30S ribosomal protein S4 [Geobacter bemidjiensis Bem]
 gi|226699068|sp|B5EFS6|RS4_GEOBB RecName: Full=30S ribosomal protein S4
 gi|197086709|gb|ACH37980.1| ribosomal protein S4 [Geobacter bemidjiensis Bem]
          Length = 208

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            GFATS +EAR+ ++     +N   ++   LQ+K  D      
Sbjct: 107 LGFATSRDEARQLVRHGHFTLNGKKVNIPSLQVKAGDVLQLRE 149


>gi|160878165|ref|YP_001557133.1| RNA-binding S4 domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160426831|gb|ABX40394.1| RNA-binding S4 domain protein [Clostridium phytofermentans ISDg]
          Length = 71

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 20/60 (33%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   +  AG   S  EA+  +    +K+N  +      +I   D     N  +  
Sbjct: 8   EEFIKLGQALKAAGLVDSGVEAKDVITEGLVKVNGVVEYQRGKKIHGGDSIEFNNEIVQI 67


>gi|328554622|gb|AEB25114.1| 16S pseudouridylate synthase [Bacillus amyloliquefaciens TA208]
          Length = 239

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M L  L+  +GF  S  + ++ +K+ A+ I+     + K+ +   
Sbjct: 1   MRLDKLLANSGF-GSRKDVKKIVKAGAVMIDGEPAKDVKIHVDPD 44


>gi|291483619|dbj|BAI84694.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 345

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 27/196 (13%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRR 92
             T + G   +  S+  G+    M      +  H       +    + I  P  R E R+
Sbjct: 17  KQTIFSGIQPSG-SVTLGNYIGAMK--QFVELQHDYNSYFCIVDQHA-ITVPQDRLELRK 72

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VN 151
                        I+ + + ++  G     A +         +        +    + + 
Sbjct: 73  ------------NIRNLAALYLAVGLDPEKATLFIQSE----VPAHAQAGWMMQCVAYIG 116

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
            +      + + K  +++      Y  L A D +     Y   L   G DQ  ++    +
Sbjct: 117 ELERMTQFKDKSKGNEAVVSGLLTYPPLMAADIL----LYGTDLVPVGEDQKQHLELTRN 172

Query: 212 LGERLKTPKLFALTSP 227
           L ER         T P
Sbjct: 173 LAERFNKKYNDIFTIP 188


>gi|254444170|ref|ZP_05057646.1| S4 domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198258478|gb|EDY82786.1| S4 domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 144

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++   GF  +   AR+ +    I +N   +     Q+K+ D   
Sbjct: 38  IVYDLGFTKTRKAARQFVNHGHISVNGQKVDIPSYQVKVGDEIE 81


>gi|52840598|ref|YP_094397.1| 30S ribosomal protein S4 [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54293345|ref|YP_125760.1| 30S ribosomal protein S4 [Legionella pneumophila str. Lens]
 gi|148361031|ref|YP_001252238.1| 30S ribosomal protein S4 [Legionella pneumophila str. Corby]
 gi|296105901|ref|YP_003617601.1| small subunit ribosomal protein S4 [Legionella pneumophila 2300/99
           Alcoy]
 gi|61215402|sp|Q5WZI8|RS4_LEGPL RecName: Full=30S ribosomal protein S4
 gi|61215429|sp|Q5ZYL9|RS4_LEGPH RecName: Full=30S ribosomal protein S4
 gi|172047874|sp|A5IHP2|RS4_LEGPC RecName: Full=30S ribosomal protein S4
 gi|52627709|gb|AAU26450.1| 30S ribosomal protein S4 [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53753177|emb|CAH14624.1| 30S ribosomal subunit protein S4 [Legionella pneumophila str. Lens]
 gi|148282804|gb|ABQ56892.1| 30S ribosomal protein S4 [Legionella pneumophila str. Corby]
 gi|295647802|gb|ADG23649.1| small subunit ribosomal protein S4 [Legionella pneumophila 2300/99
           Alcoy]
 gi|307609161|emb|CBW98617.1| 30S ribosomal subunit protein S4 [Legionella pneumophila 130b]
          Length = 206

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA++  EAR+ +   AI +N+ +++     +   D
Sbjct: 106 GFASTRAEARQLVAHKAILVNDKVVNVPSFLVNPGD 141


>gi|323702569|ref|ZP_08114232.1| tryptophanyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532543|gb|EGB22419.1| tryptophanyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 329

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 29/224 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH   L     LQ   ++    +    ++                +E +
Sbjct: 10  GMRPTGR-LHLGHQNVLNNWVELQDE-YQCFFFIANWHAL------------TTGWEEAK 55

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESV 159
              +    + + ++  G     +++      +   +   +   I     + R+    + +
Sbjct: 56  FIRQNTLEMVADWLASGLDPEKSVIFAQSDVIEHAELHLIFSMITPLSWLERVPTYKDQI 115

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +      + ++   F  Y +LQA D + + K     +   G DQ+ ++    ++  R   
Sbjct: 116 QKFGAMGKDINTYGFLGYPLLQAADIL-MYKATAVPV---GEDQFPHVELTREVARRFNN 171

Query: 219 -------PKLFALT--SPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                       +      L    G KM K+    I +  +   
Sbjct: 172 LFKPVFPEPQAVVHKKIATLPGVDGAKMSKSYGNVISIGADPDE 215


>gi|188584864|ref|YP_001916409.1| SSU ribosomal protein S4P [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|226699094|sp|B2A4P9|RS4_NATTJ RecName: Full=30S ribosomal protein S4
 gi|179349551|gb|ACB83821.1| SSU ribosomal protein S4P [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 209

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 39/123 (31%), Gaps = 4/123 (3%)

Query: 274 KRLTT-LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           +  T    + +        G      +     ++      R             F  +  
Sbjct: 25  RCYTDKCAIDKKAYAPGQHGPTRRSKQSEYGMQLREKQKARRIYGVLENQFRRYFREADR 84

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            + +   ++ +   +R   ++    + GFA S  EAR+ +    I +N   ++    ++K
Sbjct: 85  KKGITGQTLLRLLETRLDNVVY---RMGFAASRAEARQFVNHGHIMVNGKRVNVASYEVK 141

Query: 393 LQD 395
             D
Sbjct: 142 PGD 144


>gi|254495736|ref|ZP_05108651.1| 30S ribosomal protein S4 [Legionella drancourtii LLAP12]
 gi|254355049|gb|EET13669.1| 30S ribosomal protein S4 [Legionella drancourtii LLAP12]
          Length = 206

 Score = 37.0 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA++  EAR+ +   AI +N+ +++     +   D
Sbjct: 106 GFASTRAEARQLVTHKAILVNDKVVNVPSFLVSPGD 141


>gi|225010381|ref|ZP_03700853.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005860|gb|EEG43810.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 325

 Score = 37.0 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 81/305 (26%), Gaps = 48/305 (15%)

Query: 50  HAGHLT-QLMLLFWL-QKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQEIQENIEK 105
           H G++   +     + + T +     +    S+  I D      + R          +  
Sbjct: 15  HLGNILGAIQPAIEMAKDTNNNSFLFIADMHSLTQIKD----GATLRHNTYATAATWLAF 70

Query: 106 IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
              I  +       ++D   +   +W            +  FF   R+    S + +  R
Sbjct: 71  GLDIEKTVF---YRQSDVPQVTELSWY-----------LSCFFPYQRLTLAHSFKDKSDR 116

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
            + ++   F+Y +L A D +     YD      G DQ  ++    D+  R          
Sbjct: 117 LEDVNAGLFSYPMLMAADILA----YDAHFVPVGKDQLQHLEMTRDVAARFHAKLGDTFV 172

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS----- 271
            P          +    G KM K+    I L  +              D   +       
Sbjct: 173 LPEAKVQESSMYVPGTDGGKMSKSKGNTIDLF-QSDKALKKQIMGIQTDSTPMEDPKDPD 231

Query: 272 -------FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
                  +    T    + +             AK+ +   I    +   E  +      
Sbjct: 232 TDNVFALYKILATPEQTAAMRNNYTGGNYGFGHAKQALYELILEQFNPARERFEYFMNHT 291

Query: 325 ECFDM 329
           E  D 
Sbjct: 292 EEIDK 296


>gi|150020827|ref|YP_001306181.1| hemolysin A [Thermosipho melanesiensis BI429]
 gi|149793348|gb|ABR30796.1| hemolysin A [Thermosipho melanesiensis BI429]
          Length = 264

 Score = 37.0 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 10/59 (16%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS------NEKLQIKLQDFDSTGNIKLSFG 407
           L+VK G   S  +A+R + S  + +N   +       +    I+           +S G
Sbjct: 8   LLVKKGLVESREKAKRLIMSGNVIVNEERVDKVGKLVDINATIR----IKQKEKYVSRG 62


>gi|15594351|ref|NP_212139.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915079|sp|O51038|SYW_BORBU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|2687887|gb|AAC66398.1| tryptophanyl-tRNA synthetase (trsA) [Borrelia burgdorferi B31]
          Length = 353

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 68/222 (30%), Gaps = 32/222 (14%)

Query: 44  LTASSLHAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T  +LH GH     +  L   Q+  ++   ++    ++   P  +           I  
Sbjct: 14  PTG-ALHLGHYVGSVVNRLK-FQEE-YETYFIIADLHTLTTKPDLKS----------INT 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVR 160
               ++ +   ++  G       +          +   +   I +   + R+    +   
Sbjct: 61  IPSNVREMVLDYLACGINPDKVSIYLQSAIPELFELHLIFSMIVTVARLQRIPSIKDMSI 120

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +   +E         Y +L + D +         L   G D   +I    +L  R     
Sbjct: 121 AAGLKEIPYGL--LGYPVLMSADILMTK----ANLVPVGRDNESHIEFARELARRFNHLY 174

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
                     +F  + PL+      KM K+L  AI+LN +  
Sbjct: 175 KNNFFPIPESVFTDSRPLVGIYGKNKMSKSLDNAIFLNDDEN 216


>gi|321314872|ref|YP_004207159.1| tryptophanyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320021146|gb|ADV96132.1| tryptophanyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 330

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 27/196 (13%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRR 92
             T + G   +  S+  G+    M      +  H       +    + I  P  R E R+
Sbjct: 2   KQTIFSGIQPSG-SVTLGNYIGAMK--QFVELQHDYNSYFCIVDQHA-ITVPQDRLELRK 57

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VN 151
                        I+ + + ++  G     A +         +        +    + + 
Sbjct: 58  ------------NIRNLAALYLAVGLDPEKATLFIQSE----VPAHAQAGWMMQCVAYIG 101

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
            +      + + K  +++      Y  L A D +     Y   L   G DQ  ++    +
Sbjct: 102 ELERMTQFKDKSKGNEAVVSGLLTYPPLMAADIL----LYGTDLVPVGEDQKQHLELTRN 157

Query: 212 LGERLKTPKLFALTSP 227
           L ER         T P
Sbjct: 158 LAERFNKKYNDIFTIP 173


>gi|332655117|ref|ZP_08420858.1| ribosomal protein S4 [Ruminococcaceae bacterium D16]
 gi|332515977|gb|EGJ45586.1| ribosomal protein S4 [Ruminococcaceae bacterium D16]
          Length = 200

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 34/108 (31%), Gaps = 3/108 (2%)

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           ++   +   A ++T     +             ++ +     MP  +           L 
Sbjct: 36  QMRRKQSEYAMQLTEKQKVKFVYGIMEKQFHMYYEKATR---MPGKTGENLLTLIERRLD 92

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA +  EAR+ +      +N   +      +K+ D      
Sbjct: 93  NVVYRLGFAMTRREARQLVTHGHFTVNGQRVDIPSFLVKVGDVIEVRE 140


>gi|307287783|ref|ZP_07567823.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0109]
 gi|306501232|gb|EFM70536.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0109]
 gi|315164797|gb|EFU08814.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1302]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|157372205|ref|YP_001480194.1| 23S rRNA pseudouridine synthase F [Serratia proteamaculans 568]
 gi|157323969|gb|ABV43066.1| pseudouridine synthase [Serratia proteamaculans 568]
          Length = 286

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  +A R+++   + IN   ++              G + 
Sbjct: 13  ISESGIC-SRRDADRYIEQGNVFINGKRVTLGDQVFPGDVVKVNGQLI 59


>gi|94497978|ref|ZP_01304542.1| hypothetical protein SKA58_10410 [Sphingomonas sp. SKA58]
 gi|94422561|gb|EAT07598.1| hypothetical protein SKA58_10410 [Sphingomonas sp. SKA58]
          Length = 315

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 17/46 (36%), Gaps = 1/46 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +    +  L+ +AG   S  E  R +    I ++ + +      + 
Sbjct: 73  NEPQRIAKLLARAG-VASRREIERMIADGRIALDGAPVDTPATLLT 117


>gi|308174693|ref|YP_003921398.1| 16S pseudouridylate synthase [Bacillus amyloliquefaciens DSM 7]
 gi|307607557|emb|CBI43928.1| putative 16S pseudouridylate synthase [Bacillus amyloliquefaciens
           DSM 7]
 gi|328913028|gb|AEB64624.1| putative 16S pseudouridylate synthase [Bacillus amyloliquefaciens
           LL3]
          Length = 240

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M L  L+  +GF  S  + ++ +K+ A+ I+     + K+ +   
Sbjct: 2   MRLDKLLANSGF-GSRKDVKKIVKAGAVMIDGEPAKDVKIHVDPD 45


>gi|300870412|ref|YP_003785283.1| RNA pseudouridine synthase family protein [Brachyspira pilosicoli
           95/1000]
 gi|300688111|gb|ADK30782.1| RNA pseudouridine synthase family protein [Brachyspira pilosicoli
           95/1000]
          Length = 225

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            S  EA   +K   +K+N  II N   Q+   D
Sbjct: 13  ASRREADNLIKDGKVKVNGEIILNPATQVSETD 45


>gi|296314594|ref|ZP_06864535.1| S4 RNA-binding domain protein [Neisseria polysaccharea ATCC 43768]
 gi|296838633|gb|EFH22571.1| S4 RNA-binding domain protein [Neisseria polysaccharea ATCC 43768]
          Length = 77

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +   
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEIIE 61


>gi|257082079|ref|ZP_05576440.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256990109|gb|EEU77411.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|256763030|ref|ZP_05503610.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256684281|gb|EEU23976.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|256617197|ref|ZP_05474043.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256963505|ref|ZP_05567676.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257416542|ref|ZP_05593536.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|307271444|ref|ZP_07552716.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0855]
 gi|307277241|ref|ZP_07558345.1| tryptophan--tRNA ligase [Enterococcus faecalis TX2134]
 gi|256596724|gb|EEU15900.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256954001|gb|EEU70633.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257158370|gb|EEU88330.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|306506171|gb|EFM75337.1| tryptophan--tRNA ligase [Enterococcus faecalis TX2134]
 gi|306511716|gb|EFM80714.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0855]
 gi|315170368|gb|EFU14385.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1342]
 gi|323481293|gb|ADX80732.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|229545254|ref|ZP_04433979.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis TX1322]
 gi|229549492|ref|ZP_04438217.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis ATCC 29200]
 gi|255972194|ref|ZP_05422780.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255975307|ref|ZP_05425893.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256853678|ref|ZP_05559043.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis T8]
 gi|256956617|ref|ZP_05560788.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256961354|ref|ZP_05565525.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|257084695|ref|ZP_05579056.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257087360|ref|ZP_05581721.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257090495|ref|ZP_05584856.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|293383642|ref|ZP_06629551.1| tryptophan--tRNA ligase [Enterococcus faecalis R712]
 gi|293387247|ref|ZP_06631804.1| tryptophan--tRNA ligase [Enterococcus faecalis S613]
 gi|300860543|ref|ZP_07106630.1| tryptophan--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307285209|ref|ZP_07565355.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0860]
 gi|307291007|ref|ZP_07570894.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0411]
 gi|312899768|ref|ZP_07759087.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0470]
 gi|312903755|ref|ZP_07762929.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0635]
 gi|312906191|ref|ZP_07765203.1| tryptophan--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|312909536|ref|ZP_07768391.1| tryptophan--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|312953374|ref|ZP_07772214.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0102]
 gi|229305407|gb|EEN71403.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis ATCC 29200]
 gi|229309604|gb|EEN75591.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis TX1322]
 gi|255963212|gb|EET95688.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255968179|gb|EET98801.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256710621|gb|EEU25664.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis T8]
 gi|256947113|gb|EEU63745.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256951850|gb|EEU68482.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256992725|gb|EEU80027.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256995390|gb|EEU82692.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256999307|gb|EEU85827.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|291078978|gb|EFE16342.1| tryptophan--tRNA ligase [Enterococcus faecalis R712]
 gi|291083284|gb|EFE20247.1| tryptophan--tRNA ligase [Enterococcus faecalis S613]
 gi|300849582|gb|EFK77332.1| tryptophan--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306497910|gb|EFM67440.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0411]
 gi|306502910|gb|EFM72171.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0860]
 gi|310627837|gb|EFQ11120.1| tryptophan--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|310628583|gb|EFQ11866.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0102]
 gi|310632947|gb|EFQ16230.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0635]
 gi|311290209|gb|EFQ68765.1| tryptophan--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|311293018|gb|EFQ71574.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0470]
 gi|315025213|gb|EFT37145.1| tryptophan--tRNA ligase [Enterococcus faecalis TX2137]
 gi|315031027|gb|EFT42959.1| tryptophan--tRNA ligase [Enterococcus faecalis TX4000]
 gi|315032817|gb|EFT44749.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0017]
 gi|315035685|gb|EFT47617.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0027]
 gi|315146036|gb|EFT90052.1| tryptophan--tRNA ligase [Enterococcus faecalis TX2141]
 gi|315146616|gb|EFT90632.1| tryptophan--tRNA ligase [Enterococcus faecalis TX4244]
 gi|315152042|gb|EFT96058.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0031]
 gi|315159155|gb|EFU03172.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0312]
 gi|315166465|gb|EFU10482.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1341]
 gi|315576584|gb|EFU88775.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0630]
 gi|327535621|gb|AEA94455.1| tryptophan--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|303328069|ref|ZP_07358508.1| ribosomal protein S4 [Desulfovibrio sp. 3_1_syn3]
 gi|302861895|gb|EFL84830.1| ribosomal protein S4 [Desulfovibrio sp. 3_1_syn3]
          Length = 208

 Score = 37.0 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 3/122 (2%)

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           +  T     +    A  Q     +     A ++      R             F+ +   
Sbjct: 25  RCFTDKCAYDRRPYAPGQHGRARKKVSEYAVQLREKQKTRRAYGVLERQFHGYFEKAEMQ 84

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + +   ++    V     L  ++ + GFA S N+AR+ ++     +N   ++   LQ+K+
Sbjct: 85  KGVTGTNL---LVILERRLDNVVYRLGFANSRNQARQLVRHGIFTLNGHKVTIPSLQVKV 141

Query: 394 QD 395
            D
Sbjct: 142 GD 143


>gi|213963701|ref|ZP_03391952.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           sputigena Capno]
 gi|213953696|gb|EEB65027.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           sputigena Capno]
          Length = 410

 Score = 37.0 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 44/135 (32%), Gaps = 15/135 (11%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
                 + +  N  +     E        ++              +      PT++ ++ 
Sbjct: 118 KPNNYNRNEGYNRNESYNRNEGYKQNDNYKKPFNKKPYNNTYKPQNNAPIDYPTVTPAEV 177

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRH----LKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            +++ +        AG  +     RR+    + S  + +N  +++    ++K  D     
Sbjct: 178 RLNKYI------ADAGICS-----RRNADMYISSGNVTVNGEVMTTLGYRVKPTDEVRFD 226

Query: 401 NIKLSFGKKNHIICH 415
              LS  KK +I+ +
Sbjct: 227 GKLLSSEKKEYILLN 241


>gi|153839241|ref|ZP_01991908.1| tryptophanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747236|gb|EDM58224.1| tryptophanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|328473169|gb|EGF44017.1| tryptophanyl-tRNA synthetase II [Vibrio parahaemolyticus 10329]
          Length = 340

 Score = 37.0 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 80/309 (25%), Gaps = 32/309 (10%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      ++ H    L+     +         +       ++  NI 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQSEHDQTILVADMQGL---------TDNAHNPSKVSSNIL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +       +     +T   + +    L  +          +    N  +  E      +
Sbjct: 70  NVVA-DYLAVGIDPIQTTICLQSQLPALAELTMYYSNLVSIARLERNPTVKNEIQSKGFE 128

Query: 165 REQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDLGERL 216
           R     F    Y I QA D                    Q     +  N + G ++ +  
Sbjct: 129 RSIPAGF--LTYPISQAADITGFRATLVPVGDDQLPMLEQTNEIVRKINHLGGQEILKE- 185

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM-------TSPYNFWQYWRNIDDADV 269
               L +    L +T    KM K++  AI L            S Y    + R  D   V
Sbjct: 186 -CRPLLSDAPRLPSTDGKNKMSKSMGNAINLGATEKEISAAVKSMYTDPSHLRIEDPGQV 244

Query: 270 V-SFAKRLTTLPMSEIDRMAKLQGKEINEAKKI-IATEITTMVHGREEAEKAATAAMECF 327
             +          S+ + + +L+              ++                A+   
Sbjct: 245 EGNIVFTYLDAFHSDKEHVEQLKAHYRRGGLGDGTTKKVLEECLQEMLRPIREKRALYLN 304

Query: 328 DMSIHSQHM 336
           D +   + +
Sbjct: 305 DKAQLIEIL 313


>gi|213963254|ref|ZP_03391511.1| tryptophanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954116|gb|EEB65441.1| tryptophanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 322

 Score = 37.0 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 65/239 (27%), Gaps = 17/239 (7%)

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
           +G                  +  +L   +  FF   R+    S + ++   Q ++   F 
Sbjct: 70  FGLDTNKVTFYRQSD---VPQTAELSWYLACFFPYQRLTLAHSFKDKMDYLQDVNAGLFT 126

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP-------- 227
           Y +L A D +     YD  +   G DQ  ++    D+  R           P        
Sbjct: 127 YPMLMAADIL----LYDAEVVPVGKDQLQHLEITRDVASRFNHQMGETFVLPQAKIEEKI 182

Query: 228 -LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
            ++    G KM K+ +  I +                 D   + +     T   M     
Sbjct: 183 MIIPGTDGEKMSKSRNNFINIFLPEKQLRKQI-MAIQTDSTPLEAPKDPDTCNVMRLYRL 241

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
           +A  +  +  EA                        A      + + +H+  +     E
Sbjct: 242 LASPEQIQTMEAAYRAGGYGFGNAKQALYELILEKFATPRERYNYYMEHLDELDAILKE 300


>gi|213417263|ref|ZP_03350407.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 52

 Score = 37.0 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 1/37 (2%)

Query: 44 LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           T  SLH GH    +      +  H+   L+     +
Sbjct: 13 PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL 48


>gi|16078207|ref|NP_389024.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308982|ref|ZP_03590829.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221313307|ref|ZP_03595112.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221318231|ref|ZP_03599525.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221322505|ref|ZP_03603799.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|135188|sp|P21656|SYW_BACSU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|143786|gb|AAA22874.1| tryptophanyl-tRNA synthetase (EC 6.1.1.2) [Bacillus subtilis]
 gi|2633496|emb|CAB12999.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 330

 Score = 37.0 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 27/196 (13%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRR 92
             T + G   +  S+  G+    M      +  H       +    + I  P  R E R+
Sbjct: 2   KQTIFSGIQPSG-SVTLGNYIGAMK--QFVELQHDYNSYFCIVDQHA-ITVPQDRLELRK 57

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VN 151
                        I+ + + ++  G     A +         +        +    + + 
Sbjct: 58  ------------NIRNLAALYLAVGLDPEKATLFIQSE----VPAHAQAGWMMQCVAYIG 101

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
            +      + + K  +++      Y  L A D +     Y   L   G DQ  ++    +
Sbjct: 102 ELERMTQFKDKSKGNEAVVSGLLTYPPLMAADIL----LYGTDLVPVGEDQKQHLELTRN 157

Query: 212 LGERLKTPKLFALTSP 227
           L ER         T P
Sbjct: 158 LAERFNKKYNDIFTIP 173


>gi|315173602|gb|EFU17619.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1346]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|315151024|gb|EFT95040.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0012]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPKKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|314922834|gb|EFS86665.1| S4 domain protein [Propionibacterium acnes HL001PA1]
 gi|314966265|gb|EFT10364.1| S4 domain protein [Propionibacterium acnes HL082PA2]
 gi|314980791|gb|EFT24885.1| S4 domain protein [Propionibacterium acnes HL110PA3]
 gi|315090236|gb|EFT62212.1| S4 domain protein [Propionibacterium acnes HL110PA4]
 gi|315093429|gb|EFT65405.1| S4 domain protein [Propionibacterium acnes HL060PA1]
 gi|315102986|gb|EFT74962.1| S4 domain protein [Propionibacterium acnes HL050PA2]
 gi|327327046|gb|EGE68827.1| S4 domain protein [Propionibacterium acnes HL103PA1]
          Length = 71

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 2   IRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGD 47


>gi|313763970|gb|EFS35334.1| S4 domain protein [Propionibacterium acnes HL013PA1]
 gi|313791626|gb|EFS39744.1| S4 domain protein [Propionibacterium acnes HL110PA1]
 gi|313802289|gb|EFS43515.1| S4 domain protein [Propionibacterium acnes HL110PA2]
 gi|313808159|gb|EFS46633.1| S4 domain protein [Propionibacterium acnes HL087PA2]
 gi|313812557|gb|EFS50271.1| S4 domain protein [Propionibacterium acnes HL025PA1]
 gi|313814903|gb|EFS52617.1| S4 domain protein [Propionibacterium acnes HL059PA1]
 gi|313818926|gb|EFS56640.1| S4 domain protein [Propionibacterium acnes HL046PA2]
 gi|313820755|gb|EFS58469.1| S4 domain protein [Propionibacterium acnes HL036PA1]
 gi|313822480|gb|EFS60194.1| S4 domain protein [Propionibacterium acnes HL036PA2]
 gi|313825724|gb|EFS63438.1| S4 domain protein [Propionibacterium acnes HL063PA1]
 gi|313828068|gb|EFS65782.1| S4 domain protein [Propionibacterium acnes HL063PA2]
 gi|313839055|gb|EFS76769.1| S4 domain protein [Propionibacterium acnes HL086PA1]
 gi|314915000|gb|EFS78831.1| S4 domain protein [Propionibacterium acnes HL005PA4]
 gi|314918670|gb|EFS82501.1| S4 domain protein [Propionibacterium acnes HL050PA1]
 gi|314920475|gb|EFS84306.1| S4 domain protein [Propionibacterium acnes HL050PA3]
 gi|314925670|gb|EFS89501.1| S4 domain protein [Propionibacterium acnes HL036PA3]
 gi|314932149|gb|EFS95980.1| S4 domain protein [Propionibacterium acnes HL067PA1]
 gi|314954585|gb|EFS98991.1| S4 domain protein [Propionibacterium acnes HL027PA1]
 gi|314958616|gb|EFT02718.1| S4 domain protein [Propionibacterium acnes HL002PA1]
 gi|314959777|gb|EFT03879.1| S4 domain protein [Propionibacterium acnes HL002PA2]
 gi|314962352|gb|EFT06453.1| S4 domain protein [Propionibacterium acnes HL082PA1]
 gi|314968218|gb|EFT12317.1| S4 domain protein [Propionibacterium acnes HL037PA1]
 gi|314979161|gb|EFT23255.1| S4 domain protein [Propionibacterium acnes HL072PA2]
 gi|314986715|gb|EFT30807.1| S4 domain protein [Propionibacterium acnes HL005PA2]
 gi|314989458|gb|EFT33549.1| S4 domain protein [Propionibacterium acnes HL005PA3]
 gi|315077438|gb|EFT49498.1| S4 domain protein [Propionibacterium acnes HL053PA2]
 gi|315080182|gb|EFT52158.1| S4 domain protein [Propionibacterium acnes HL078PA1]
 gi|315084063|gb|EFT56039.1| S4 domain protein [Propionibacterium acnes HL027PA2]
 gi|315089118|gb|EFT61094.1| S4 domain protein [Propionibacterium acnes HL072PA1]
 gi|315098941|gb|EFT70917.1| S4 domain protein [Propionibacterium acnes HL059PA2]
 gi|315100818|gb|EFT72794.1| S4 domain protein [Propionibacterium acnes HL046PA1]
 gi|315108036|gb|EFT80012.1| S4 domain protein [Propionibacterium acnes HL030PA2]
 gi|327330519|gb|EGE72266.1| S4 domain protein [Propionibacterium acnes HL096PA3]
 gi|327446856|gb|EGE93510.1| S4 domain protein [Propionibacterium acnes HL013PA2]
 gi|327450119|gb|EGE96773.1| S4 domain protein [Propionibacterium acnes HL087PA3]
 gi|327455154|gb|EGF01809.1| S4 domain protein [Propionibacterium acnes HL092PA1]
 gi|327455327|gb|EGF01982.1| S4 domain protein [Propionibacterium acnes HL083PA2]
 gi|328752532|gb|EGF66148.1| S4 domain protein [Propionibacterium acnes HL020PA1]
 gi|328752784|gb|EGF66400.1| S4 domain protein [Propionibacterium acnes HL087PA1]
 gi|328759294|gb|EGF72910.1| S4 domain protein [Propionibacterium acnes HL025PA2]
          Length = 71

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 2   IRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGD 47


>gi|289425824|ref|ZP_06427578.1| S4 domain protein [Propionibacterium acnes SK187]
 gi|289426790|ref|ZP_06428518.1| S4 domain protein [Propionibacterium acnes J165]
 gi|289153767|gb|EFD02474.1| S4 domain protein [Propionibacterium acnes SK187]
 gi|289160116|gb|EFD08292.1| S4 domain protein [Propionibacterium acnes J165]
 gi|332675009|gb|AEE71825.1| RNA-binding S4 domain-containing protein [Propionibacterium acnes
           266]
          Length = 76

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 7   IRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGD 52


>gi|282854430|ref|ZP_06263767.1| S4 domain protein [Propionibacterium acnes J139]
 gi|282583883|gb|EFB89263.1| S4 domain protein [Propionibacterium acnes J139]
          Length = 76

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 7   IRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGD 52


>gi|221632808|ref|YP_002522030.1| hemolysin A [Thermomicrobium roseum DSM 5159]
 gi|221155770|gb|ACM04897.1| hemolysin A [Thermomicrobium roseum DSM 5159]
          Length = 265

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 16/41 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V  G   + ++AR  + +  + + +  +      +   
Sbjct: 10  DLLVSRGLVATRSQARALIMAGRVWLGDQRVEKAGELLPAD 50


>gi|213618826|ref|ZP_03372652.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 276

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 1/46 (2%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 2   ESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVAGDVVKVNGRLI 46


>gi|212697386|ref|ZP_03305514.1| hypothetical protein ANHYDRO_01956 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675578|gb|EEB35185.1| hypothetical protein ANHYDRO_01956 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 69

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNS 382
            L+     A S  EA+  +K   I +N  
Sbjct: 15  DLLKATDIAQSGGEAKHLIKEYGILVNGE 43


>gi|168205142|ref|ZP_02631147.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           E str. JGS1987]
 gi|169347063|ref|ZP_02866005.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           C str. JGS1495]
 gi|169296746|gb|EDS78875.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           C str. JGS1495]
 gi|170663342|gb|EDT16025.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           E str. JGS1987]
          Length = 301

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +K+E+   + L   I + GF  S  EA + ++   +KI+    +
Sbjct: 55  NKNEIRDEVRLNKYISETGFC-SRREADKLIEQGRVKIDGVKAT 97


>gi|13476217|ref|NP_107787.1| hemolysin-like protein [Mesorhizobium loti MAFF303099]
 gi|14026977|dbj|BAB53573.1| hemolysin-like protein [Mesorhizobium loti MAFF303099]
          Length = 254

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 17/43 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            L+V+ G   S + AR  ++   + ++  +       +  Q  
Sbjct: 15  DLLVQRGLFASRSRARDAVERGTVTVDGVMARKPGQNVSPQCL 57


>gi|28897870|ref|NP_797475.1| tryptophanyl-tRNA synthetase II [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260361800|ref|ZP_05774825.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260877029|ref|ZP_05889384.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895109|ref|ZP_05903605.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|28806083|dbj|BAC59359.1| putative tryptophanyl-tRNA synthetase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308089213|gb|EFO38908.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093812|gb|EFO43507.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308113230|gb|EFO50770.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 340

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 80/309 (25%), Gaps = 32/309 (10%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      ++ H    L+     +         +       ++  NI 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQSEHDQTILVADMQGL---------TDNAHNPSKVSSNIL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +       +     +T   + +    L  +          +    N  +  E      +
Sbjct: 70  NVVA-DYLAVGIDPIQTTICLQSQLPALAELTMYYSNLVSIARLERNPTVKNEIQSKGFE 128

Query: 165 REQSLSFLEFNYMILQAYDFVELA--------KNYDCRLQMGGSDQWGNIICGIDLGERL 216
           R     F    Y I QA D                    Q     +  N + G ++ +  
Sbjct: 129 RSIPAGF--LTYPISQAADITGFRATLVPVGDDQLPMLEQTNEIVRKINHLGGQEILKE- 185

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM-------TSPYNFWQYWRNIDDADV 269
               L +    L +T    KM K++  AI L            S Y    + R  D   V
Sbjct: 186 -CRPLLSDAPRLPSTDGKNKMSKSMGNAINLGATEKEISVAVKSMYTDPSHLRIEDPGQV 244

Query: 270 V-SFAKRLTTLPMSEIDRMAKLQGKEINEAKKI-IATEITTMVHGREEAEKAATAAMECF 327
             +          S+ + + +L+              ++                A+   
Sbjct: 245 EGNIVFTYLDAFHSDKEHVEQLKAHYRRGGLGDGTTKKVLEECLQEMLRPIREKRALYLN 304

Query: 328 DMSIHSQHM 336
           D +   + +
Sbjct: 305 DKAQLIEIL 313


>gi|18311295|ref|NP_563229.1| hypothetical protein CPE2313 [Clostridium perfringens str. 13]
 gi|18145978|dbj|BAB82019.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 301

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +K+E+   + L   I + GF  S  EA + ++   +KI+    +
Sbjct: 55  NKNEIRDEVRLNKYISETGFC-SRREADKLIEQGRVKIDGVKAT 97


>gi|319776127|ref|YP_004138615.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           influenzae F3047]
 gi|329123291|ref|ZP_08251859.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           aegyptius ATCC 11116]
 gi|317450718|emb|CBY86938.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           influenzae F3047]
 gi|327471500|gb|EGF16948.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           aegyptius ATCC 11116]
          Length = 232

 Score = 37.0 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G     ++A + ++ +A+KIN  I+ +  +QI  +D  
Sbjct: 10  NTGLT--RSQATKAIRQSAVKINGEIVKSGAVQISQEDKI 47


>gi|257421998|ref|ZP_05598988.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163822|gb|EEU93782.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315155645|gb|EFT99661.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0043]
          Length = 334

 Score = 37.0 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQAL---------TDNAKNPEKVSV 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 60  NVLEV-ALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++      
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFQ----ANLVPVGEDQKPMLEQAQEIVHSFNQ 169


>gi|167761342|ref|ZP_02433469.1| hypothetical protein CLOSCI_03750 [Clostridium scindens ATCC 35704]
 gi|167661008|gb|EDS05138.1| hypothetical protein CLOSCI_03750 [Clostridium scindens ATCC 35704]
          Length = 247

 Score = 37.0 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 9/54 (16%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +  AG   S  EA R ++S  + ++          +          +K   GKK
Sbjct: 8   LSDAGVC-SRREADRLIESGQVSVDGQR------AVPGMKVADGQEVK--VGKK 52


>gi|145641141|ref|ZP_01796722.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           influenzae R3021]
 gi|145274302|gb|EDK14167.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           influenzae 22.4-21]
          Length = 232

 Score = 37.0 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G     ++A + ++ +A+KIN  I+ +  +QI  +D  
Sbjct: 10  NTGLT--RSQATKAIRQSAVKINGEIVKSGAVQISQEDKI 47


>gi|150402763|ref|YP_001330057.1| tryptophanyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150033793|gb|ABR65906.1| tryptophanyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 357

 Score = 37.0 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 8/78 (10%)

Query: 6   SDFLSILSE------RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM 58
           S+ ++ L E      RG +    + +++    + G   T   G   +   +H GH   + 
Sbjct: 26  SEIVNTLKEPHSFMKRGIVFGHRDFQKIADAMNNGKDFTVVSGMMPSGK-MHFGHKMVVD 84

Query: 59  LLFWLQKTGHKPISLMGG 76
            L + QK G      +  
Sbjct: 85  QLLYYQKYGADIYIPIAD 102


>gi|256826599|ref|YP_003150558.1| 30S ribosomal protein S4P [Cryptobacterium curtum DSM 15641]
 gi|256582742|gb|ACU93876.1| SSU ribosomal protein S4P [Cryptobacterium curtum DSM 15641]
          Length = 197

 Score = 37.0 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ + GFA +  EAR+ +    I +N + +     +++  D  
Sbjct: 91  NIVFRLGFARTRREARQTVTHGHITVNGNRVDIPSYRVRPGDLI 134


>gi|331269808|ref|YP_004396300.1| 30S ribosomal protein S4 [Clostridium botulinum BKT015925]
 gi|329126358|gb|AEB76303.1| ribosomal protein S4 [Clostridium botulinum BKT015925]
          Length = 197

 Score = 37.0 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            ++ + GFA S  +AR+ +    I +N   +     Q+K+ D     
Sbjct: 92  NIVYRIGFANSIRQARQMVNHGYILVNGKKVDIPSYQVKVGDIVKLK 138


>gi|325920707|ref|ZP_08182613.1| hypothetical protein XGA_1592 [Xanthomonas gardneri ATCC 19865]
 gi|325548759|gb|EGD19707.1| hypothetical protein XGA_1592 [Xanthomonas gardneri ATCC 19865]
          Length = 80

 Score = 37.0 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|303240945|ref|ZP_07327456.1| ribosomal protein S4 [Acetivibrio cellulolyticus CD2]
 gi|302591531|gb|EFL61268.1| ribosomal protein S4 [Acetivibrio cellulolyticus CD2]
          Length = 208

 Score = 37.0 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ + G ATS  EAR+ ++     +N   ++      KL D  
Sbjct: 102 NVVYRLGLATSRPEARQLVRHGHFTVNGKKVNIPSYLTKLGDAI 145


>gi|188990913|ref|YP_001902923.1| hypothetical protein xccb100_1517 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732673|emb|CAP50867.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 131

 Score = 37.0 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 55  LEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 114

Query: 401 NIKLSF 406
           ++++  
Sbjct: 115 DVEIRV 120


>gi|154496129|ref|ZP_02034825.1| hypothetical protein BACCAP_00413 [Bacteroides capillosus ATCC
           29799]
 gi|150274684|gb|EDN01748.1| hypothetical protein BACCAP_00413 [Bacteroides capillosus ATCC
           29799]
          Length = 70

 Score = 37.0 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L  L+  +G A +  EA+  +++  + +N  + +    +I+  D
Sbjct: 13  IKLEGLLKFSGVAETGGEAKNIIQAGDVSVNGEVCTMRGKKIRPGD 58


>gi|21232076|ref|NP_637993.1| hypothetical protein XCC2645 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767798|ref|YP_242560.1| hypothetical protein XC_1472 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21113819|gb|AAM41917.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573130|gb|AAY48540.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 80

 Score = 37.0 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|329768986|ref|ZP_08260409.1| tryptophanyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328835793|gb|EGF85516.1| tryptophanyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 338

 Score = 37.0 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 90/340 (26%), Gaps = 48/340 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +   +   ++    ++         +       ++ E
Sbjct: 11  PTGK-LHLGHYVGSLKNRVALQNEEDTEIFVMIADQQAL---------TDNADNPGKVIE 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           NI     +    +     +T   + +    L  +    L     S    N  +  E    
Sbjct: 61  NI-TEVALDYLAVGLDPSRTTIFIQSQIPQLAELNMYYLNLVTVSRLHRNPTVKQEINDK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
           +        F  F Y + QA D       +       G DQ   +    ++     R+  
Sbjct: 120 KFGESIPAGF--FTYPVSQAADITAFKATH----VPVGEDQKPMLEQTREIVRDFNRIYN 173

Query: 219 PKLFALTSPLLT---------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------- 262
             +  L   +L               KM K+L+  I+L        +             
Sbjct: 174 KDVLVLPEIILPPKDHARLVGIDGKGKMSKSLNNGIYLGDSEKDIKDKVMKMYTDPNHIR 233

Query: 263 -----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA-TEITTMV---HGR 313
                 ++   V  +            +         + + K      E+          
Sbjct: 234 VEDPGQVEGNVVFKYLDIFDPRTDEVAELKEHYSRGGLGDVKLKKRLNEVMQEFLRPIRE 293

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISIS-KDEVSRGMGL 352
              E A   A     +   S+   +++ S  DEV   MG+
Sbjct: 294 RREEFAKDKAEVYNMLKAGSEKAESVAASTLDEVKDAMGI 333


>gi|225012502|ref|ZP_03702938.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003479|gb|EEG41453.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 322

 Score = 37.0 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 63/210 (30%), Gaps = 31/210 (14%)

Query: 50  HAGHLT-QLMLLFWLQKTGHK-PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   ++    + K         +    S+    +   E+ R          +    
Sbjct: 15  HLGNLLGAVLPAIEMAKASSDDSFLFIADLHSLTQIKNG--ETLRENTFATAATWLACGL 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I ++       ++D   +    W               FF   R+    S + + ++  
Sbjct: 73  DIENTHF---YRQSDVSEVTELAWYLH-----------CFFPYQRLTLAHSFKDKSEQLS 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F+Y +L A D +     YD  +   G DQ  ++    D+  R           P
Sbjct: 119 DINAGLFSYPMLMAADIL----LYDAEIVPVGKDQLQHLEITRDVAARFNHQMGETFVLP 174

Query: 228 ---------LLTTASGTKMGKTLSGAIWLN 248
                     +    G KM K+    I + 
Sbjct: 175 QAKIQESSQYVPGTDGEKMSKSKENTINIF 204


>gi|184158637|ref|YP_001846976.1| 16S rRNA uridine-516 pseudouridylate synthase [Acinetobacter
           baumannii ACICU]
 gi|332874333|ref|ZP_08442245.1| pseudouridylate synthase [Acinetobacter baumannii 6014059]
 gi|183210231|gb|ACC57629.1| 16S rRNA uridine-516 pseudouridylate synthase [Acinetobacter
           baumannii ACICU]
 gi|322507599|gb|ADX03053.1| rsuA [Acinetobacter baumannii 1656-2]
 gi|323518555|gb|ADX92936.1| 16S rRNA uridine-516 pseudouridylate synthase [Acinetobacter
           baumannii TCDC-AB0715]
 gi|332737461|gb|EGJ68376.1| pseudouridylate synthase [Acinetobacter baumannii 6014059]
          Length = 234

 Score = 37.0 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDF 396
            +K+ ++ I+  ++S+ K Q   ++F
Sbjct: 21  LIKNGSVSIDGEVVSDLKKQFAPENF 46


>gi|169629456|ref|YP_001703105.1| l RNA pseudouridine synthase [Mycobacterium abscessus ATCC 19977]
 gi|169241423|emb|CAM62451.1| Probablel RNA pseudouridine synthase [Mycobacterium abscessus]
          Length = 263

 Score = 37.0 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             G+ L  ++ +AG A S   A R +    ++++  I++ +  +I   
Sbjct: 20  EEGIRLQKVLSQAGIA-SRRVAERMIYDGRVEVDGEIVTEQGRRIDPA 66


>gi|145528470|ref|XP_001450029.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417629|emb|CAK82632.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2961

 Score = 37.0 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 53/136 (38%), Gaps = 2/136 (1%)

Query: 133  CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            C   YI+  + +    S+ ++L  +  +            + N  +++ + F++L +++ 
Sbjct: 2181 CDQVYINSFQRLCQIKSIQQILHLDDFQPT-PHNIKCQLSKQNIHLMKQFSFIKLLQDFH 2239

Query: 193  CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
             + Q   +D W       +L         FA +  L+   +  K  +  +    +N+  T
Sbjct: 2240 SQFQ-PQNDSWFFHQNLNELQIFYYLSICFAYSPKLIENLNQQKTKQLENAINQINQLST 2298

Query: 253  SPYNFWQYWRNIDDAD 268
            +P  + Q  + I   +
Sbjct: 2299 NPKFYCQSLKCIQINN 2314


>gi|149185282|ref|ZP_01863599.1| S4 domain protein [Erythrobacter sp. SD-21]
 gi|148831393|gb|EDL49827.1| S4 domain protein [Erythrobacter sp. SD-21]
          Length = 85

 Score = 37.0 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS---TGNIKL 404
           M +  L+    F  + + AR+ +    I+ N   +      I + D  +     ++KL
Sbjct: 1   MRIDRLLCTLRFVRTRSAARKLVDQGHIRRNGERVLRPSRDIAVGDVLTLPVGRHVKL 58


>gi|116629833|ref|YP_815005.1| cell division protein [Lactobacillus gasseri ATCC 33323]
 gi|282851657|ref|ZP_06261022.1| S4 domain protein [Lactobacillus gasseri 224-1]
 gi|116095415|gb|ABJ60567.1| Cell division protein, S4-like domain [Lactobacillus gasseri ATCC
           33323]
 gi|282557625|gb|EFB63222.1| S4 domain protein [Lactobacillus gasseri 224-1]
          Length = 265

 Score = 37.0 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 19/136 (13%)

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
            D   K Q     E K     ++T +   + +      + +   +       + TIS+  
Sbjct: 129 NDENGKWQFFVKTELKDYFIEQVTRVGRTKVKLHDLPLSKVLAQEDDSKELSVITISLRL 188

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS----T 399
           D V   +             S ++ ++ +    +K+N  +++   + + +QD  S     
Sbjct: 189 DAVVSAV--------TNL--SRSQVKKIIADGEVKLNWHLVAQSNIIVSVQDMFSIRHYG 238

Query: 400 GNIKL-----SFGKKN 410
               +       GKK 
Sbjct: 239 RYEIINLATTKKGKKR 254


>gi|298674790|ref|YP_003726540.1| 30S ribosomal protein S4e [Methanohalobium evestigatum Z-7303]
 gi|298287778|gb|ADI73744.1| Ribosomal protein S4E, central domain protein [Methanohalobium
           evestigatum Z-7303]
          Length = 240

 Score = 37.0 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            + M +  ++    G   + +EA+R L    + ++     + K  + L D  
Sbjct: 35  EQSMPISVILRDMLGLVDNRSEAKRVLSQGKVLVDGKPRKDLKFPVGLFDII 86


>gi|296137862|ref|YP_003645105.1| RNA-binding S4 domain protein [Tsukamurella paurometabola DSM
           20162]
 gi|296025996|gb|ADG76766.1| RNA-binding S4 domain protein [Tsukamurella paurometabola DSM
           20162]
          Length = 80

 Score = 37.0 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           I  +     + L   +  AG   S  EA+  +    + +N  +
Sbjct: 12  IDVEISDEVIRLGQFLKLAGLIDSGAEAKGVIADGEVSVNGEV 54


>gi|145630872|ref|ZP_01786649.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae R3021]
 gi|260582948|ref|ZP_05850732.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae NT127]
 gi|144983532|gb|EDJ91000.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae R3021]
 gi|260094048|gb|EEW77952.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae NT127]
          Length = 232

 Score = 37.0 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G     ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 10  NTGLT--RSQATKAIRQSAVKINGEIVKSGAVQISQED 45


>gi|319784706|ref|YP_004144182.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170594|gb|ADV14132.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 254

 Score = 37.0 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 15/30 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            L+V+ G   S + AR  ++   + ++  I
Sbjct: 15  DLLVQRGLFASRSRARDAVERGTVTVDGVI 44


>gi|205355962|ref|ZP_03222730.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346086|gb|EDZ32721.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 319

 Score = 37.0 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 94/323 (29%), Gaps = 41/323 (12%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+   +    +    ++              
Sbjct: 1   MRVLTGLQPSGD-LHIGNYFGAIKQMVDAQEKS-QMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + ++L   +  F  +  + 
Sbjct: 46  SSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSD---VKEVMELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L A D +     +D R+   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMAADIL----LFDTRIVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           ++        T P         ++    G KM K+    I +       ++  +  +   
Sbjct: 159 KINNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDI-------FSSEKTLKKQI 211

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA--TEITTMVHGREEAEKAATAA 323
            + V               +     +       +K +    E     +G  +        
Sbjct: 212 SSIVTDSTALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVN 271

Query: 324 MECFDMSIHSQHMPTISISKDEV 346
               +       +        E+
Sbjct: 272 AYFKEAREKYNELLEKPSHLKEI 294


>gi|254818897|ref|ZP_05223898.1| ribosomal large subunit pseudouridine synthase B [Mycobacterium
           intracellulare ATCC 13950]
          Length = 247

 Score = 37.0 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + G+ L  ++ +AG A S   A + +    ++++  +++    ++   
Sbjct: 4   AEGIRLQKVLSQAGIA-SRRAAEKLIIEGRVEVDGQVVTELGTRVDPD 50


>gi|163783136|ref|ZP_02178130.1| 30S ribosomal protein S4 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881470|gb|EDP74980.1| 30S ribosomal protein S4 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 211

 Score = 37.0 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 21/47 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            ++ + GFAT+  +AR+ +    I +N   +     +++  D     
Sbjct: 102 NVVYRLGFATTRRQARQLVAHGHILVNGRKVDIPHYEVEPGDIIEVK 148


>gi|307128649|ref|YP_003880679.1| tryptophanyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483111|gb|ADM89981.1| tryptophanyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 325

 Score = 37.0 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 96/311 (30%), Gaps = 34/311 (10%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G++  +ML  +  +  +  K   L+    S+              +   I+   +   
Sbjct: 15  HIGNVLGVMLPIIDIVNNSLEKVFILIADLHSL-------------TKINNIKNIKDNTY 61

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I ++++  G     A++          +    L     +    R+    S ++    ++
Sbjct: 62  KIAAAWLACGLNIDKAILYRQSDITQITELFWYLNCFLPY---QRLKLSHSFKNMKNSKK 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
           +++   F Y IL A D +     ++ +    G DQ  +I     + +++          P
Sbjct: 119 NINIGLFTYPILMAADIL----LFETKRVFVGKDQLQHIEITRKIAKKINNKIKKIFVIP 174

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                     +    G+KM K+ +  I +               + ++  + S+ +    
Sbjct: 175 EAKMKKNSMSIPGIDGSKMSKSKNNTINIFSSKKEIKKQIMN-IHTNNNKISSYEELNND 233

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           +  +    +A        E + +   E        +             +   +  ++  
Sbjct: 234 IIYNIYKLLANKAEIFHFEKQILFEKEF--GYEKAKIELYKYIIFRFSNERKKYKFYLKN 291

Query: 339 ISISKDEVSRG 349
             I    +++G
Sbjct: 292 KKIISSILNKG 302


>gi|257466443|ref|ZP_05630754.1| ribosomal small subunit pseudouridine synthase A [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917599|ref|ZP_07913839.1| ribosomal small subunit pseudouridine synthase A [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691474|gb|EFS28309.1| ribosomal small subunit pseudouridine synthase A [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 232

 Score = 36.7 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLS 405
           M +   +V+ G   S  E +  LKS  I++N   I++ K  I+ + D    G  KLS
Sbjct: 1   MRIDKFLVECG-VGSRKEVKELLKSRKIRVNGLFITSPKETIEEEKDEVYYGEKKLS 56


>gi|227497605|ref|ZP_03927826.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226832931|gb|EEH65314.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 102

 Score = 36.7 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 23/71 (32%)

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             +     SQ           V   + L   +  AG      EAR  ++S  +++N  + 
Sbjct: 1   MTWKTGAMSQTHDAYQYPTVLVRGEIKLGQFLKLAGLVEDGAEARIAIQSGDVRVNGEVE 60

Query: 385 SNEKLQIKLQD 395
           +     +   D
Sbjct: 61  TRRGHHLAAGD 71


>gi|91775491|ref|YP_545247.1| tryptophanyl-tRNA synthetase II [Methylobacillus flagellatus KT]
 gi|91709478|gb|ABE49406.1| tryptophanyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 339

 Score = 36.7 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 56/194 (28%), Gaps = 17/194 (8%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  +K   ++    ++         +  M    ++  N+
Sbjct: 13  PTGP-LHLGHYVGSLRNRVHYQHEYKQYIMLADAQAL---------TDNMDDIDKVHRNV 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
            ++  +    +      +   + +    L  + +  L     +    N  +  E      
Sbjct: 63  IEV-ALDYLAVGIDPKLSTIFIQSQVPELTELAFYYLNLVTVARLERNPTVKEEIRLRNF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           +R+    F    Y + QA D           L   G DQ   I    ++  R        
Sbjct: 122 ERDIPAGF--LTYPVSQAADITAFK----ATLVPVGEDQIPMIEQTNEIVRRFNRLYKHP 175

Query: 224 LTSPLLTTASGTKM 237
           +T   +   +   +
Sbjct: 176 VTKQEILVETKALV 189


>gi|94499453|ref|ZP_01305990.1| Hypothetical protein yjbC [Oceanobacter sp. RED65]
 gi|94428207|gb|EAT13180.1| Hypothetical protein yjbC [Oceanobacter sp. RED65]
          Length = 376

 Score = 36.7 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI 383
           I ++G   S  EA R+++   + IN   
Sbjct: 13  ISESGIC-SRREADRYIEQGNVYINGKR 39


>gi|218767590|ref|YP_002342102.1| hypothetical protein NMA0633 [Neisseria meningitidis Z2491]
 gi|121051598|emb|CAM07898.1| hypothetical protein NMA0633 [Neisseria meningitidis Z2491]
          Length = 77

 Score = 36.7 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +   
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRSGEVIE 61


>gi|57237443|ref|YP_178456.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|86148963|ref|ZP_01067195.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597355|ref|ZP_01100590.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148926479|ref|ZP_01810162.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|218562046|ref|YP_002343825.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|25009452|sp|Q9PIB4|SYW_CAMJE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|73621972|sp|Q5HW79|SYW_CAMJR RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|57166247|gb|AAW35026.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|85840321|gb|EAQ57578.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190416|gb|EAQ94390.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112359752|emb|CAL34538.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145844642|gb|EDK21748.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|284925659|gb|ADC28011.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315057811|gb|ADT72140.1| Tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 319

 Score = 36.7 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 94/323 (29%), Gaps = 41/323 (12%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +    G   +   LH G+    +  +   Q+   +    +    ++              
Sbjct: 1   MRVLTGLQPSGD-LHIGNYFGAIKQMVDAQEKS-QMFMFIANYHAM-------------T 45

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            SQ+ ++  +      ++F+  G     ++           + ++L   +  F  +  + 
Sbjct: 46  SSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSD---VKEVMELYWILSQFTPMGLLE 102

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              S + ++ +  S S   F+Y +L A D +     +D R+   G DQ  ++    D+  
Sbjct: 103 RAHSYKDKVAKGLSASHGLFSYPVLMAADIL----LFDTRIVPVGKDQIQHVEIARDIAL 158

Query: 215 RLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           ++        T P         ++    G KM K+    I +       ++  +  +   
Sbjct: 159 KVNNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDI-------FSSEKTLKKQI 211

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA--TEITTMVHGREEAEKAATAA 323
            + V               +     +       +K +    E     +G  +        
Sbjct: 212 SSIVTDSTALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVN 271

Query: 324 MECFDMSIHSQHMPTISISKDEV 346
               +       +        E+
Sbjct: 272 AYFKEAREKYNELLEKPSHLKEI 294


>gi|261749610|ref|YP_003257296.1| hypothetical protein BPLAN_550 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497703|gb|ACX84153.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 255

 Score = 36.7 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            K E  + + L   +  AG   S  EA + ++S  I++N  I++     +   D      
Sbjct: 8   KKIEEEKFIRLNHYLSNAGIT-SRREADKLIQSGLIEVNGKIVTKFGTVVHKNDVIKFHG 66

Query: 402 IKLSFGKKNHIIC 414
            ++   KK   I 
Sbjct: 67  SRIKN-KKKIYIL 78


>gi|40890007|pdb|1VIO|A Chain A, Crystal Structure Of Pseudouridylate Synthase
 gi|40890008|pdb|1VIO|B Chain B, Crystal Structure Of Pseudouridylate Synthase
          Length = 243

 Score = 36.7 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 20/31 (64%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 17  RSQATKAIRQSAVKINGEIVKSGSVQISQED 47


>gi|319795938|ref|YP_004157578.1| ribosomal RNA methyltransferase rrmj/ftsj [Variovorax paradoxus
           EPS]
 gi|315598401|gb|ADU39467.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
           EPS]
          Length = 278

 Score = 36.7 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 354 TLIVKAGFATSTNEARRHLKSN 375
            L+V+ G A S ++A R +   
Sbjct: 5   QLLVERGLAASRSQAVRLIAGG 26


>gi|239817643|ref|YP_002946553.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
           S110]
 gi|239804220|gb|ACS21287.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
           S110]
          Length = 263

 Score = 36.7 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 354 TLIVKAGFATSTNEARRHLKSN 375
            L+V+ G A S ++A R +   
Sbjct: 5   QLLVERGLAASRSQAVRLIAGG 26


>gi|325578607|ref|ZP_08148707.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159843|gb|EGC71973.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 232

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G     ++A + ++ +A+KIN+ I+ N   ++  +D     +  LS
Sbjct: 10  NTGLT--RSQATKAIRQSAVKINDEIVKNGATKVSQEDEIYFEDELLS 55


>gi|306836026|ref|ZP_07469016.1| cytotoxin/hemolysin [Corynebacterium accolens ATCC 49726]
 gi|304568053|gb|EFM43628.1| cytotoxin/hemolysin [Corynebacterium accolens ATCC 49726]
          Length = 268

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI------ISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+   A S  +AR  +KS  + +          + + ++ IK+++ +       S G
Sbjct: 12  LVRRKIARSREQAREMIKSGRVTVGGFKAEKPATVVDPEVSIKVEESEEDKWA--SRG 67


>gi|242399937|ref|YP_002995362.1| Tryptophanyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259516960|sp|C6A032|SYW_THESM RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|242266331|gb|ACS91013.1| Tryptophanyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 384

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           L    +      Y G   +   +H GH+       WLQ+
Sbjct: 64  LKDYEAGKGFFLYTGRGPSGP-MHIGHIIPFFATKWLQE 101


>gi|237712663|ref|ZP_04543144.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237723604|ref|ZP_04554085.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229438057|gb|EEO48134.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229453984|gb|EEO59705.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 1023

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 60/207 (28%), Gaps = 13/207 (6%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIG--DPSFRDESR--RMMRSQEIQENIEKIK 107
           G   ++       K G  P+ L+ G +  I   DP+        +   S  I  N     
Sbjct: 168 GATVKIRGTGTFSKAGTDPLVLIDGLSGNIDDVDPNDIQSISFLKDAASASIYGNRAANG 227

Query: 108 GIFSSFIKYGTGKTDALMLNNETW---------LCSIKYIDLLREIGSFFSVNRMLSFES 158
            I     K   GKT     N+  W         L S +Y +                 E 
Sbjct: 228 VILIETKKGAQGKTTITYSNSFGWQQPTELPDFLPSWEYAEYYNMAMRNMGKQEAYLPEQ 287

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           ++       S ++   N++             ++  +Q G +    N+  G    E +  
Sbjct: 288 IQKYRDGSDSDNYPNVNHLKWLLESGSGFQHQHNLSIQGGNATTSYNLSVGYRNQEGMTA 347

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAI 245
                  + L T  S    G  L+  I
Sbjct: 348 KTSNERMTALFTMKSEIAKGLMLNLNI 374


>gi|227503700|ref|ZP_03933749.1| possible hemolysin A [Corynebacterium accolens ATCC 49725]
 gi|227075736|gb|EEI13699.1| possible hemolysin A [Corynebacterium accolens ATCC 49725]
          Length = 268

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI------ISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+   A S  +AR  +KS  + +          + + ++ IK+++ +       S G
Sbjct: 12  LVRRKIARSREQAREMIKSGRVTVGGFKAEKPATVVDPEVSIKVEESEEDKWA--SRG 67


>gi|126696380|ref|YP_001091266.1| S4 domain-containing protein [Prochlorococcus marinus str. MIT
           9301]
 gi|126543423|gb|ABO17665.1| S4 domain-containing protein [Prochlorococcus marinus str. MIT
           9301]
          Length = 58

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   +      +S  EA+  +KS ++K+N  I +    Q+   D
Sbjct: 1   MKLDQFLKWKNLVSSGGEAKIFIKSGSVKVNGVIETRRGRQLNKGD 46


>gi|221133739|ref|ZP_03560044.1| 30S ribosomal protein S4 [Glaciecola sp. HTCC2999]
          Length = 206

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 8/63 (12%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++  EAR+ +   AI +N  +++    ++
Sbjct: 78  EAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAICVNGQVVNIPSFKV 137

Query: 392 KLQ 394
             +
Sbjct: 138 SAE 140


>gi|73540535|ref|YP_295055.1| hypothetical protein Reut_A0832 [Ralstonia eutropha JMP134]
 gi|72117948|gb|AAZ60211.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
          Length = 80

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 25/66 (37%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I+ +     + L  L+  AG   S    +  + +  + ++    S +  +I++    S  
Sbjct: 12  ITFELDGEFIALNDLLKLAGICDSGGAGKALVAAGEVSVDGEPESRKTAKIRVGQVVSLA 71

Query: 401 NIKLSF 406
            I +  
Sbjct: 72  GIDIRV 77


>gi|149197232|ref|ZP_01874284.1| hypothetical protein LNTAR_12521 [Lentisphaera araneosa HTCC2155]
 gi|149139778|gb|EDM28179.1| hypothetical protein LNTAR_12521 [Lentisphaera araneosa HTCC2155]
          Length = 297

 Score = 36.7 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSFG 407
           M L   I  +GF  S  EA R ++   + IN         Q++ +DF       IK    
Sbjct: 1   MRLNKFISDSGFC-SRREADRLIEEGRVLINGRRCK-TGQQVEDKDFVEVDGQRIKAKRQ 58

Query: 408 KKNHII 413
           K+   +
Sbjct: 59  KERVYL 64


>gi|217077200|ref|YP_002334918.1| RNA pseudouridine synthase family protein [Thermosipho africanus
           TCF52B]
 gi|217037055|gb|ACJ75577.1| RNA pseudouridine synthase family protein [Thermosipho africanus
           TCF52B]
          Length = 225

 Score = 36.7 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIK 403
             S  + ++ +K   +K+N SI++  +  +   D  F     I 
Sbjct: 6   VGSRKQVKKLIKEKRVKVNGSIVTKPEFNVDENDEVFVDDIEII 49


>gi|41615041|ref|NP_963539.1| 30S ribosomal protein S4P [Nanoarchaeum equitans Kin4-M]
 gi|61215657|sp|Q74NF7|RS4_NANEQ RecName: Full=30S ribosomal protein S4P
 gi|40068765|gb|AAR39100.1| NEQ247 [Nanoarchaeum equitans Kin4-M]
          Length = 180

 Score = 36.7 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 25/51 (49%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           L T++V+ G A +  +AR+ +    I +N  ++      +K ++ D    +
Sbjct: 104 LQTMLVRKGLAKTMKQARQFIVHGHIMVNGEVVDAPSYLVKKEEEDKIEFV 154


>gi|16273162|ref|NP_439399.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae Rd KW20]
 gi|260581161|ref|ZP_05848981.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           influenzae RdAW]
 gi|1175857|sp|P45124|RSUA_HAEIN RecName: Full=Ribosomal small subunit pseudouridine synthase A;
           AltName: Full=16S pseudouridine 516 synthase; AltName:
           Full=16S pseudouridylate 516 synthase; AltName:
           Full=rRNA pseudouridylate synthase A; AltName:
           Full=rRNA-uridine isomerase A
 gi|1574175|gb|AAC22895.1| 16s pseudouridylate 516 synthase (rsuA) [Haemophilus influenzae Rd
           KW20]
 gi|260092189|gb|EEW76132.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           influenzae RdAW]
          Length = 232

 Score = 36.7 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 20/31 (64%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 15  RSQATKAIRQSAVKINGEIVKSGSVQISQED 45


>gi|145633297|ref|ZP_01789028.1| malic enzyme [Haemophilus influenzae 3655]
 gi|145634426|ref|ZP_01790136.1| malic enzyme [Haemophilus influenzae PittAA]
 gi|148825838|ref|YP_001290591.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae PittEE]
 gi|229845029|ref|ZP_04465165.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae 6P18H1]
 gi|229846853|ref|ZP_04466960.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae 7P49H1]
 gi|144986143|gb|EDJ92733.1| malic enzyme [Haemophilus influenzae 3655]
 gi|145268406|gb|EDK08400.1| malic enzyme [Haemophilus influenzae PittAA]
 gi|148715998|gb|ABQ98208.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae PittEE]
 gi|229810342|gb|EEP46061.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae 7P49H1]
 gi|229812001|gb|EEP47694.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae 6P18H1]
 gi|309972980|gb|ADO96181.1| 16S rRNA U516 pseudouridine synthase [Haemophilus influenzae R2846]
          Length = 232

 Score = 36.7 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 20/31 (64%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 15  RSQATKAIRQSAVKINGEIVKSGSVQISQED 45


>gi|331701962|ref|YP_004398921.1| tryptophanyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129305|gb|AEB73858.1| tryptophanyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 338

 Score = 36.7 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 35/226 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G ++   ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYVGSLKNRVELQNSGDYETFIMIADMQAL------TDNARDPEKIRHSLI 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+  L+ +    L  +          S  + N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPQKSTILVQSQIPALPELTQHYSNLVTVSRLNRNPTVKNEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----- 216
           +  +   + F    Y I QA D               G DQ   +    ++         
Sbjct: 121 KFGQSVPVGFA--MYPISQAADITAFK----ATTVPVGDDQEPMLEQTREIVRTFNSVYN 174

Query: 217 ---------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                      P       P L      KM K+L  AI+L  +  +
Sbjct: 175 DDILVEPEGYFPPKGMGRIPGL--DGNAKMSKSLGNAIYLADDEDT 218


>gi|319940917|ref|ZP_08015255.1| S4 domain-containing protein [Sutterella wadsworthensis 3_1_45B]
 gi|319805633|gb|EFW02421.1| S4 domain-containing protein [Sutterella wadsworthensis 3_1_45B]
          Length = 75

 Score = 36.7 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG A +  EA+  ++   +K+N  + +
Sbjct: 14  ITLDALMKAAGLAGTGGEAKVRIQGGEVKVNGEVET 49


>gi|315059155|gb|ADT73484.1| Putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 253

 Score = 36.7 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 7/46 (15%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EA   +K   +KINN I       +  +            GK+
Sbjct: 14  SRREADELIKQGLVKINNKI-----ALLSDEVKFDDKVFV--KGKR 52


>gi|291549380|emb|CBL25642.1| tryptophanyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 361

 Score = 36.7 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 57/185 (30%), Gaps = 22/185 (11%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ TG       ++    ++         +      ++++
Sbjct: 11  PTGR-LHVGHYVGSLRRRVELQNTGDFDDIFIMIADAQAL---------TDNADNPEKVR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NI ++  +          K+   + +    L  + +  +     S    N  +  E   
Sbjct: 61  QNIIEV-ALDYMACGLDPEKSTLFIQSQVPELTELSFYYMNLVTVSRLQRNPTVKNEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D           +   G DQ   +    ++  +     
Sbjct: 120 RNFEASIPVGF--FTYPISQAADITAFK----ATVVPVGEDQLPMLEQTKEIVHKFN--S 171

Query: 221 LFALT 225
           ++  T
Sbjct: 172 VYGDT 176


>gi|282901320|ref|ZP_06309246.1| Hemolysin A [Cylindrospermopsis raciborskii CS-505]
 gi|281193815|gb|EFA68786.1| Hemolysin A [Cylindrospermopsis raciborskii CS-505]
          Length = 279

 Score = 36.7 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQI--KLQDFDSTGNIKLSFG 407
            +S  +A+R +++  + +N  II     +I    +       + +S G
Sbjct: 23  CSSRQQAQRLIQAGEVMVNQQIIDKPGTEIDTSAEIQIKERPLFVSRG 70


>gi|240047138|ref|YP_002960526.1| hypothetical protein MCJ_000030 [Mycoplasma conjunctivae HRC/581]
 gi|239984710|emb|CAT04682.1| HYPOTHETICAL PROTEIN MCJ_000030 [Mycoplasma conjunctivae]
          Length = 72

 Score = 36.7 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSF 406
           + +  L+ K  F  S  E++  L  N +KIN   ++    ++++ DF   +   I++  
Sbjct: 10  ITIGQLLKKENFVNSGGESKFFLLENVVKINGIRVTTRSTKVRIDDFVWINDELIEIKA 68


>gi|305662603|ref|YP_003858891.1| SSU ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
 gi|304377172|gb|ADM27011.1| SSU ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
          Length = 252

 Score = 36.7 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           VSR + LL L+      A ++ EA+R +    I ++     + K  I   D  S   I
Sbjct: 39  VSRSIPLLILVRDVLNIAKTSREAKRIIFDGKIYVDGVQRRDYKFPIGPMDSISIPEI 96


>gi|42560658|ref|NP_975109.1| hemolysin A [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492154|emb|CAE76751.1| hemolysin A [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|301320463|gb|ADK69106.1| S4 domain protein [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 149

 Score = 36.7 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           K     S N+A+ H+ +  + +NN  I      +   D     + KL
Sbjct: 11  KNNLTQSRNKAKEHILNKEVYVNNIAIMKPSFLVDSNDLIEIRSTKL 57


>gi|300088170|ref|YP_003758692.1| 30S ribosomal protein S4 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527903|gb|ADJ26371.1| ribosomal protein S4 [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 207

 Score = 36.7 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++ + G A S  +AR+ ++   I +N   +      +K  D
Sbjct: 101 NVVYRLGLADSRAQARQLVRHGHITVNGRKLDIPSYLVKESD 142


>gi|296282690|ref|ZP_06860688.1| hypothetical protein CbatJ_03660 [Citromicrobium bathyomarinum
           JL354]
          Length = 252

 Score = 36.7 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            ++  +G  +  L+ +AG   S  E  R +    I I+   +      ++
Sbjct: 2   AEDERKGDRIAKLLARAG-VASRREVERMIADKRIAIDGKTVETPATLLE 50


>gi|289668224|ref|ZP_06489299.1| hypothetical protein XcampmN_06935 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 80

 Score = 36.7 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|289663286|ref|ZP_06484867.1| hypothetical protein XcampvN_09437 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 80

 Score = 36.7 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|163814985|ref|ZP_02206372.1| hypothetical protein COPEUT_01138 [Coprococcus eutactus ATCC 27759]
 gi|158449668|gb|EDP26663.1| hypothetical protein COPEUT_01138 [Coprococcus eutactus ATCC 27759]
          Length = 69

 Score = 36.7 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           + L   +  AG   S  EA+  +    + +N  + +    ++   D       K+S  K
Sbjct: 11  IKLGQALKAAGLVESGVEAKEFIVQGLVVVNGEVETRRGRKLYDGDEVEFDGDKISIQK 69


>gi|91217281|ref|ZP_01254242.1| tryptophanyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184624|gb|EAS71006.1| tryptophanyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 322

 Score = 36.7 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 20/159 (12%)

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E      ++++ +G     +            +  +L+  +   F   R+    S + + 
Sbjct: 58  ENTYATAATWLAFGLDVEKSTFYRQSD---VPQVTELMWYLNCMFPYQRLTLAHSFKDKS 114

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
            R   ++   F+Y +L A D +     YD      G DQ  +I    D+ ER      + 
Sbjct: 115 DRLSDVNAGLFSYPMLMAADIL----LYDAEFIPVGKDQLQHIEMTRDVAERFHA--QYG 168

Query: 224 LTS-----------PLLTTASGTKMGKTLSGAIWLNKEM 251
            T              +    G KM K+   AI + +  
Sbjct: 169 ETFVLPEAKLSESSKYVLGTDGAKMSKSKGNAIIIFQTD 207


>gi|78048533|ref|YP_364708.1| hypothetical protein XCV2977 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325928508|ref|ZP_08189698.1| hypothetical protein XPE_3759 [Xanthomonas perforans 91-118]
 gi|78036963|emb|CAJ24665.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325541121|gb|EGD12673.1| hypothetical protein XPE_3759 [Xanthomonas perforans 91-118]
          Length = 80

 Score = 36.7 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|54302077|ref|YP_132070.1| tryptophanyl-tRNA synthetase II [Photobacterium profundum SS9]
 gi|46915498|emb|CAG22270.1| putative tryptophanyl-tRNA synthetase [Photobacterium profundum
           SS9]
          Length = 339

 Score = 36.7 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 47/177 (26%), Gaps = 17/177 (9%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GHL   +    L +  +    L+     +         +      Q++  NI 
Sbjct: 19  TGP-LHLGHLVGSLQQRVLLQEQYDQTVLVADLQGL---------TDNGHNPQKVSSNIL 68

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +       +     KT   + +    L  +          S    N  +  E       
Sbjct: 69  NVVA-DYLAVGINPSKTTICLQSAIPALSELTMYYSNLVSISRLERNPTVKNEIKSKEFG 127

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           R     F    Y I QA D           L   G DQ   +    ++  RL     
Sbjct: 128 RSIPAGF--LTYPISQAADITAFK----ATLVPVGEDQLPMLEQTNEIVRRLNHIAQ 178


>gi|282601228|ref|ZP_05981133.2| leucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569765|gb|EFB75300.1| leucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 853

 Score = 36.7 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 39/353 (11%), Positives = 96/353 (27%), Gaps = 24/353 (6%)

Query: 23  NPRELDILCSQGVVTAYIGYD---LTASSLHAGH----LTQLMLLFWLQKTGHKPISLMG 75
           +               Y   +    +A+ LH GH        ++    ++ G+  +  MG
Sbjct: 24  DEDTFHAEIDHSKPKFYALVEFPYPSAAGLHVGHPRSYTALDIVARKKRQCGYNVLYPMG 83

Query: 76  -GGTSIIGDPSFR-DESRRMMRSQEIQENIEKIKGIFSS-----FIKYGTGKTDALMLNN 128
                +   P+        +       +N+ + K    +             TD      
Sbjct: 84  WDAFGL---PTENYALKNHINPEIVTAKNVARFKSQLQALGLSFDWDREINTTDPEYYKW 140

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+  ++            +VN     + V +  +    +        ++Q      + 
Sbjct: 141 TQWIF-LQLYKKGLAYKKETTVNYCTGCKVVLANEEVVNGV-CERCGSPVVQKVKSQWML 198

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K      ++       + I  +   +R    +         TTA  T    T        
Sbjct: 199 KITAYADRLIDDLDDVDYIERVKTQQRNWIGRSHGAEINFDTTAGDTLTVYTTRADTLFG 258

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
                      Y +   DA ++   + +      E  R +  +  E+N+ K  +  E   
Sbjct: 259 CTYMVVSPEHAYIKKWVDAGLIKNTEAVAAY-QEEAARKSDFERTELNKEKTGVKIEGVE 317

Query: 309 MVHGREEAEKAATAAMEC--FDMSIHSQHMPTISISKDEVSR--GMGLLTLIV 357
            ++     +     +        +     +P       E ++  G+ ++ ++ 
Sbjct: 318 AINPVNGKQVPIFISDYVLATYGTGAIMAVPAHDTRDWEFAKKFGLPIIEVVK 370


>gi|330686325|gb|EGG97930.1| S4 domain protein [Staphylococcus epidermidis VCU121]
          Length = 243

 Score = 36.7 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 51/138 (36%), Gaps = 11/138 (7%)

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           + + ++  T+    +       G + N+   II  E    V  +                
Sbjct: 78  IHYPEKFVTIQHQHVLGTLMSLGIDRNQLGDIIVGERIQFVLTKALESFIMLEFTRIKGA 137

Query: 330 SIHSQHMPTISISKDEVSRGMGL---------LTLIVKAGFATSTNEARRHLKSNAIKIN 380
           +I    +P   + + E      +         L +++K     S + A++ ++   +K+N
Sbjct: 138 TIKLNSIPLEDMIQSE--ENWKIQSSTVSALRLDVVLKDMIHKSRSIAKQLIEKKRVKVN 195

Query: 381 NSIISNEKLQIKLQDFDS 398
           ++II +   Q+++ D  S
Sbjct: 196 HTIIDSPDFQLEMNDLLS 213


>gi|257884716|ref|ZP_05664369.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257820554|gb|EEV47702.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 336

 Score = 36.7 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 11  PTGK-LHLGHYVGSLKTRVVMQADEDNQLFVMIADMQAL---------TDNAKNPEKVSS 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           N+ ++  +    +     K+   + +    L  +    L          N  +  E  + 
Sbjct: 61  NVLQV-ALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGRVRRNPTVKTEIEQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +        F  F Y + QA D           L   G DQ   +    ++ +    
Sbjct: 120 KFGESVPTGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVQSFNH 170


>gi|169826795|ref|YP_001696953.1| tryptophanyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168991283|gb|ACA38823.1| Tryptophanyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 329

 Score = 36.7 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 4/138 (2%)

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +    S+  +      + +   ++S+S     Y  L A D +     Y+  +   G DQ
Sbjct: 92  MLQCVASIGELERMTQFKDKSHGKESVSAALLTYPPLMAADIL----LYNTNIVPVGDDQ 147

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
             +I    DL ER        LT P +         K+L        +            
Sbjct: 148 KQHIELTRDLAERFNKRYGNVLTIPEIQLPKAGARIKSLQEPTKKMSKSDPNTKATIRLL 207

Query: 263 NIDDADVVSFAKRLTTLP 280
           +            +T   
Sbjct: 208 DTAKDIEKKIKSAVTDSD 225


>gi|157413409|ref|YP_001484275.1| S4 domain-containing protein [Prochlorococcus marinus str. MIT
           9215]
 gi|254527019|ref|ZP_05139071.1| putative S4 domain protein [Prochlorococcus marinus str. MIT 9202]
 gi|157387984|gb|ABV50689.1| S4 domain [Prochlorococcus marinus str. MIT 9215]
 gi|221538443|gb|EEE40896.1| putative S4 domain protein [Prochlorococcus marinus str. MIT 9202]
          Length = 58

 Score = 36.7 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   +      +S  EA+  +KS ++K+N  I +    ++   D
Sbjct: 1   MKLDQFLKWKNLVSSGGEAKIFIKSGSVKVNGVIETRRGRKLNKGD 46


>gi|315929678|gb|EFV08855.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 204

 Score = 36.7 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 7/46 (15%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EA   +K   +KINN I       +  +            GK+
Sbjct: 14  SRREADELIKQGLVKINNKI-----ALLSDEVKFDDKVFV--KGKR 52


>gi|315125093|ref|YP_004067097.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315018815|gb|ADT66908.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 233

 Score = 36.7 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 7/46 (15%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EA   +K   +KINN I       +  +            GK+
Sbjct: 14  SRREADELIKQGLVKINNKI-----ALLSDEVKFDDKVFV--KGKR 52


>gi|159905462|ref|YP_001549124.1| tryptophanyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886955|gb|ABX01892.1| tryptophanyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 358

 Score = 36.7 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 8/78 (10%)

Query: 6   SDFLSILSE------RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM 58
           S+ ++ L E      RG +    + +++    +     T   G   +   +H GH   + 
Sbjct: 26  SEIVNTLKEPHSFMKRGIVFGHRDFQKIADAMNNEKEFTVVSGMMPSGK-MHFGHKMVVD 84

Query: 59  LLFWLQKTGHKPISLMGG 76
            L + QK G      +  
Sbjct: 85  QLLYYQKYGADIYIPIAD 102


>gi|145629302|ref|ZP_01785101.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae 22.1-21]
 gi|144978805|gb|EDJ88528.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae 22.1-21]
          Length = 232

 Score = 36.7 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 20/31 (64%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 15  RSQATKAIRQSAVKINGEIVKSGSVQISQED 45


>gi|257875811|ref|ZP_05655464.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|325570411|ref|ZP_08146188.1| tryptophan--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|257809977|gb|EEV38797.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|325156621|gb|EGC68798.1| tryptophan--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 335

 Score = 36.7 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 51/176 (28%), Gaps = 19/176 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPENQLYIMVADMQAL---------TDNAKTPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           NI ++  +    +     KT   + +    L  +    L     +    N  +  E  + 
Sbjct: 60  NILEV-ALDYLAVGLDPAKTTMFIQSQIPQLSELTMYYLNLVSVARVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           +        F  F Y + QA D           L   G DQ   +    ++     
Sbjct: 119 KFGEGVPSGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVHSFN 168


>gi|57236895|ref|YP_179848.1| RNA pseudouridylate synthase family protein [Campylobacter jejuni
           RM1221]
 gi|57165699|gb|AAW34478.1| RNA pseudouridylate synthase family protein [Campylobacter jejuni
           RM1221]
          Length = 253

 Score = 36.7 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 7/46 (15%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EA   +K   +KINN I       +  +            GK+
Sbjct: 14  SRREADELIKQGLVKINNKI-----ALLSDEVKFDDKVFV--KGKR 52


>gi|121612851|ref|YP_001001353.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|167006242|ref|ZP_02272000.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|87248974|gb|EAQ71936.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 81-176]
          Length = 253

 Score = 36.7 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 7/46 (15%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EA   +K   +KINN I       +  +            GK+
Sbjct: 14  SRREADELIKQGLVKINNKI-----ALLSDEVKFDDKVFV--KGKR 52


>gi|86150527|ref|ZP_01068751.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|86152349|ref|ZP_01070559.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|86154122|ref|ZP_01072321.1| ribosomal large subunit pseudouridine synthase B [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597657|ref|ZP_01100890.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|157415931|ref|YP_001483187.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|205355723|ref|ZP_03222493.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|218563295|ref|YP_002345075.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|85838979|gb|EAQ56244.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|85840646|gb|EAQ57898.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|85842362|gb|EAQ59578.1| ribosomal large subunit pseudouridine synthase B [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88189961|gb|EAQ93937.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112361002|emb|CAL35803.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|157386895|gb|ABV53210.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|205346500|gb|EDZ33133.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|284926900|gb|ADC29252.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni IA3902]
 gi|307748569|gb|ADN91839.1| Pseudouridine synthase [Campylobacter jejuni subsp. jejuni M1]
 gi|315926636|gb|EFV06016.1| putative ribosomal pseudouridine synthase [Campylobacter jejuni
           subsp. jejuni DFVF1099]
 gi|315931323|gb|EFV10292.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 253

 Score = 36.7 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 7/46 (15%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EA   +K   +KINN I       +  +            GK+
Sbjct: 14  SRREADELIKQGLVKINNKI-----ALLSDEVKFDDKVFV--KGKR 52


>gi|145636895|ref|ZP_01792560.1| malic enzyme [Haemophilus influenzae PittHH]
 gi|145269976|gb|EDK09914.1| malic enzyme [Haemophilus influenzae PittHH]
          Length = 232

 Score = 36.7 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 20/31 (64%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 15  RSQATKAIRQSAVKINGEIVKSGSVQISQED 45


>gi|309388981|gb|ADO76861.1| tryptophanyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 334

 Score = 36.7 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 96/349 (27%), Gaps = 47/349 (13%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                    G   T   LH GH    +      +  +    ++    ++           
Sbjct: 3   KNNKKRILTGDRPTGK-LHLGHYVGSLQNRVKLQNEYDTFLIIADVQAL----------- 50

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                   ++  E ++ +   ++  G       +          +  +L        +VN
Sbjct: 51  -TTNFDHPEKLSEDVRQVARDYLAAGIDPEKTTIFVQS---LVPEIAELTVLYSMIVTVN 106

Query: 152 RMLSFESVRSRLKR--EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++    +++S  ++   Q +S+    Y + QA D           L   G DQ  +I   
Sbjct: 107 QLRHNPTIKSEAEQYGYQEMSYGFLGYPVSQAADIT----FCQANLVPVGEDQIPHIEQT 162

Query: 210 IDLGERLKT---------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
             +  +              L +    L+      KM K+L+ AI+L+    S     Q 
Sbjct: 163 RKIVRKFNNMYGEVFPEPEALISDFPRLIGLDGKNKMSKSLNNAIYLS---DSKEKVSQK 219

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII-ATEITTMVHGREEAEKA 319
                        K  T       D     +   +   +K       T +          
Sbjct: 220 IM-----------KAKTDPARIHKDDPGNPEVCTVFHYQKAFNTKNHTQIAEKCRAGTIG 268

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             A  +     ++    P     K  +     +  ++ K G A +  EA
Sbjct: 269 CVACKKKMIKKLNLFLEPMRERRKKYLENPELIDQILNK-GTAKARKEA 316


>gi|332654821|ref|ZP_08420563.1| S4 domain protein [Ruminococcaceae bacterium D16]
 gi|332516164|gb|EGJ45772.1| S4 domain protein [Ruminococcaceae bacterium D16]
          Length = 71

 Score = 36.7 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  +A+  ++   +K+N    +
Sbjct: 13  IKLQDLLKFAGAVETGGDAKLIIQEGRVKVNGETCT 48


>gi|304408174|ref|ZP_07389823.1| tryptophanyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304342862|gb|EFM08707.1| tryptophanyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 329

 Score = 36.7 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 53/198 (26%), Gaps = 17/198 (8%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +      + +   + S+    F Y  L A D +     Y+  L   G DQ  ++   
Sbjct: 99  MGELERMTQFKDKSTGKDSVGAGLFVYPTLMAADIL----LYNADLVPVGDDQKQHLELT 154

Query: 210 IDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            DL  R        F +  P +       M              ++P             
Sbjct: 155 RDLAHRFNSRFGDFFKVPEPYIPKVGARIMS---LDDASKKMSKSNPNPGSFIALLDSPD 211

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
            +     R TT    E+              K  ++  +T   H    +  A  A  +  
Sbjct: 212 VIRKKLSRATTDSGREVK--------YDPANKPEVSNLMTIYSHCAGLSLDAIEAQYDGQ 263

Query: 328 DMSIHSQHMPTISISKDE 345
                 + +    +S  E
Sbjct: 264 GYGAFKKDLAEAVVSVIE 281


>gi|188997597|ref|YP_001931848.1| RNA-binding S4 domain protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932664|gb|ACD67294.1| RNA-binding S4 domain protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 244

 Score = 36.7 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 6/30 (20%), Positives = 16/30 (53%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKL 393
           S ++ ++ +K   +K+N+ I+ +    I  
Sbjct: 14  SRSQVQKLIKKGFVKVNDEIVKDPSYHIDP 43


>gi|119945902|ref|YP_943582.1| pseudouridine synthase [Psychromonas ingrahamii 37]
 gi|119864506|gb|ABM03983.1| ribosomal large subunit pseudouridine synthase F [Psychromonas
           ingrahamii 37]
          Length = 318

 Score = 36.7 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +  + +  + L   I  +GF  S  EA + ++ N +KIN           +L      G+
Sbjct: 15  NIVDNNSEIRLNKFISDSGFC-SRREADKLIEQNRVKINGD-------IPELGTKVQLGD 66

Query: 402 IKLSFGKK 409
           + L  GK+
Sbjct: 67  LVLVDGKR 74


>gi|323135793|ref|ZP_08070876.1| RNA-binding S4 domain protein [Methylocystis sp. ATCC 49242]
 gi|322398884|gb|EFY01403.1| RNA-binding S4 domain protein [Methylocystis sp. ATCC 49242]
          Length = 640

 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   + +AG   S  EA + +    + +N  ++ N    +K  D  
Sbjct: 85  EGERIAKAMARAGVC-SRREAEQWIAEGRVAVNGVVLPNAAFNVKEGDRI 133


>gi|297159404|gb|ADI09116.1| tryptophanyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 340

 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 66/243 (27%), Gaps = 33/243 (13%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP--ISLMGGGTSIIGDPSFRDESRR 92
               + G   T   L  G+    +   W+Q+  H    +  +    ++            
Sbjct: 8   QPRIFSGIQPTG-HLTLGNYLGAVR-RWVQEDQHNADAVFCVVDLHAL-----------T 54

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +         + +              +    + ++       +   L+    +   + R
Sbjct: 55  VEHDPARMRRLTRQAATLMLAAGLDPDRCTVFVQSHVD--EHARLSYLMECTAADGEMRR 112

Query: 153 MLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           M+   E V     R +S+      Y  L A D +     Y       G DQ  ++     
Sbjct: 113 MIQYKEKVAREQARGRSVRLSLLTYPALMAADILA----YGTDEVPVGDDQAQHVELART 168

Query: 212 LGERLKTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQY 260
           L +R         T P +T               +KMGK+ + A  +   +       + 
Sbjct: 169 LAQRFNQRYGPVFTVPRMTRPQVAARVMNLQDPTSKMGKSHAEAAGIVYLLDEEDVVRKK 228

Query: 261 WRN 263
              
Sbjct: 229 VMR 231


>gi|239629860|ref|ZP_04672891.1| glycosyl transferase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239527472|gb|EEQ66473.1| glycosyl transferase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 378

 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 49/197 (24%), Gaps = 12/197 (6%)

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  GH    L         DP  R  +       +  + I     I  SF  +      
Sbjct: 24  LQAAGHDVTIL-----GWREDPHGRMTTDTFDFDGQTLKAIFTGIKISYSFKYFKVFAFM 78

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
                   WL    +     +  +  +   + S   V  + K +      ++        
Sbjct: 79  RFEAFLYRWLSKHLHEYDAVQACNVHT-GYITSK--VAKKTKTKLVYDIFDYAPDTRNYP 135

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA----SGTKMG 238
           ++      +   + M  +D                 P+  A+       +    +   + 
Sbjct: 136 EWYRKMVVHWENVTMATADWTLICSEDRRRQIEPAKPQHLAVIYNSPLDSPVATNAEAVD 195

Query: 239 KTLSGAIWLNKEMTSPY 255
            T      +     SPY
Sbjct: 196 PTQKDFKIVYIGGLSPY 212


>gi|84515394|ref|ZP_01002756.1| ribosomal large subunit pseudouridine synthase D [Loktanella
           vestfoldensis SKA53]
 gi|84510677|gb|EAQ07132.1| ribosomal large subunit pseudouridine synthase D [Loktanella
           vestfoldensis SKA53]
          Length = 349

 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 4/31 (12%), Positives = 15/31 (48%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S +   R +   A+ ++  ++++ + +I   
Sbjct: 39  SRSRLARLIADGAVAVDGQVVTDPRFRIAEG 69


>gi|326796520|ref|YP_004314340.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas mediterranea
           MMB-1]
 gi|326547284|gb|ADZ92504.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas mediterranea
           MMB-1]
          Length = 255

 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIK--INN--SIISNEKLQIKL 393
           L+ ++G A S ++A+  +    +   IN    +I+   L+++ 
Sbjct: 7   LLTESGLAKSRSQAQSFINQKKVSAHINGTWQLITKPSLKLEE 49


>gi|320449902|ref|YP_004201998.1| ribosomal RNA large subunit methyltransferase J [Thermus
           scotoductus SA-01]
 gi|320150071|gb|ADW21449.1| ribosomal RNA large subunit methyltransferase J [Thermus
           scotoductus SA-01]
          Length = 244

 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 21/39 (53%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G A S  +A+R ++S  +K+   +++    ++   
Sbjct: 7   LVERGLAESREKAQRLIQSGQVKVAGQVVTKPAHRVPEG 45


>gi|256825859|ref|YP_003149819.1| 30S ribosomal protein S4 [Kytococcus sedentarius DSM 20547]
 gi|256689252|gb|ACV07054.1| SSU ribosomal protein S4P [Kytococcus sedentarius DSM 20547]
          Length = 202

 Score = 36.7 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIA----TEITTMVHGREEAEKAATAAMECFDMSIH 332
           +            + G+   + K+ +A     +    ++G  E +     A         
Sbjct: 22  SDKSFDARPYPPGMHGRRRTQEKEYLAQLQEKQKARFMYGVMEKQFRRYYAEAARRPGKT 81

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
             ++ TI  S+ +         +I +AG A +   AR+ +      +N   +    +Q+ 
Sbjct: 82  GDNLLTILESRLD--------NVIYRAGIAPTRRAARQLVTHGHFLLNGQRVDVPSIQVS 133

Query: 393 LQDFDS 398
             D   
Sbjct: 134 KFDIID 139


>gi|257866176|ref|ZP_05645829.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257872507|ref|ZP_05652160.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257800110|gb|EEV29162.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257806671|gb|EEV35493.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 335

 Score = 36.7 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 51/176 (28%), Gaps = 19/176 (10%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPENQLYIMVADMQAL---------TDNAKTPEKVSA 59

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           NI ++  +    +     KT   + +    L  +    L     +    N  +  E  + 
Sbjct: 60  NILEV-ALDYLAVGLDPAKTTMFIQSQIPQLSELTMYYLNLVSVARVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           +        F  F Y + QA D           L   G DQ   +    ++     
Sbjct: 119 KFGEGVPSGF--FIYPVSQAADITAFK----ANLVPVGEDQKPMLEQTQEIVHSFN 168


>gi|56964300|ref|YP_176031.1| tryptophanyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56910543|dbj|BAD65070.1| tryptophanyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 329

 Score = 36.7 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 69/242 (28%), Gaps = 38/242 (15%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRM 93
            T + G   + + L  G+      L         +     +    + I  P  R + R  
Sbjct: 2   QTVFSGIQPSGT-LTLGNYLG--ALKHFADMQNDYDCFFCIVDQHA-ITVPQERLKLR-- 55

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNR 152
                     E I+ + + +I  G     + +         +     L  +    S +  
Sbjct: 56  ----------ENIRSLAALYIASGIDPNKSTLFIQSE----VPAHAQLGWMMQCVSYIGE 101

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +      + +   ++++S     Y  L A D +     Y   +   G DQ  ++    +L
Sbjct: 102 LERMTQFKDKSSGKEAVSAALLTYPPLMAADIL----LYQTDIVPVGEDQKQHLELTRNL 157

Query: 213 GERLKTPKLFALTSPLL-----------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ER         T P +                 KM K+   A      +  P    +  
Sbjct: 158 AERFNAKYNDIFTVPDVRIPKVGARIMSLNDPHKKMSKSNPNAKSYISMLDEPKTIAKKI 217

Query: 262 RN 263
           ++
Sbjct: 218 KS 219


>gi|237786125|ref|YP_002906830.1| Tryptophanyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237759037|gb|ACR18287.1| Tryptophanyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 348

 Score = 36.7 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 74/251 (29%), Gaps = 31/251 (12%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGD 83
                   +       G   T+ S H G+    +     LQ   +     +    +I  D
Sbjct: 4   ENEQQSAQEHKARVVSGLQPTSDSYHLGNYLGAVRQFIKLQDN-YDAFYFIPDLHAITVD 62

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
                        Q++++            +  G     + +          +   ++  
Sbjct: 63  ----------QDPQQLRKRTLSGVAQL---LALGIDPDRSTLFVQSHVPEHAQLGWIMTC 109

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  F   +RM  F+  +S  +  +  S   F Y +L A D +     Y   L   G DQ 
Sbjct: 110 LTGFGEASRMTQFKD-KSSKQGTERTSAGLFAYPMLMAADIL----LYKPELVPVGEDQR 164

Query: 204 GNIICGIDLGERLK--TPKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMT 252
            ++    +L +R      + F +    +   +           KM K+ S    +   + 
Sbjct: 165 QHMELTRNLAQRFNSRFGETFVVPDGFIPEGAAKIYDLQEPTSKMSKSGSNPKGIVNLLD 224

Query: 253 SPYNFWQYWRN 263
            P    +  R+
Sbjct: 225 DPKVSAKRIRS 235


>gi|311281430|ref|YP_003943661.1| pseudouridine synthase [Enterobacter cloacae SCF1]
 gi|308750625|gb|ADO50377.1| pseudouridine synthase [Enterobacter cloacae SCF1]
          Length = 292

 Score = 36.7 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +              G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRATIGDQVAPGDVVKVNGQLI 59


>gi|237739915|ref|ZP_04570396.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423523|gb|EEO38570.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 325

 Score = 36.7 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 61/235 (25%), Gaps = 30/235 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   +   LH G+    M           +     +    S+         +      + 
Sbjct: 7   GIQPSGI-LHLGNYFGAMK--QFVDLQSDYDGFYFIADYHSL------TSLTSPETLREN 57

Query: 99  IQENIEKIKGI-FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
               +     I           +++       TWL           + +   +  +    
Sbjct: 58  TYNIVLDYLAIGLDPSKSTIFLQSNVPEHTELTWL-----------LSNITPIGLLERGH 106

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           S + +  +    +     Y +L A D +     YD  +   G DQ  ++    D+  +  
Sbjct: 107 SYKDKTAKGIPANTGLLTYPVLMAADIL----IYDSDVVPVGKDQKQHLEMTRDIAMKFN 162

Query: 218 TP---KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                + F L  PL+   S    G              + +   +  +    + V
Sbjct: 163 QQYGVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFVTKKKLKEQVMSIV 217


>gi|156619317|gb|ABU88338.1| ribosomal protein S4 [Chlamydomonas moewusii]
          Length = 269

 Score = 36.7 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +   A +   AR+ +    I++NN  ++      K +D  S
Sbjct: 128 NIVFRLNMAPTIGAARQLITHGHIRVNNKKVNIPSYMCKPKDVIS 172


>gi|159905736|ref|YP_001549398.1| 30S ribosomal protein S4P [Methanococcus maripaludis C6]
 gi|226699087|sp|A9A9Z3|RS4_METM6 RecName: Full=30S ribosomal protein S4P
 gi|159887229|gb|ABX02166.1| ribosomal protein S4 [Methanococcus maripaludis C6]
          Length = 178

 Score = 36.7 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 47/142 (33%), Gaps = 3/142 (2%)

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
           W           +++   +   E+ +M         +A+K+I+   T       +     
Sbjct: 18  WIGERIQKEREISQKYGLVNKKELWKMETQLRNYRRQARKLISDTTTQGGKEAVQLFNVL 77

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
                  +      H+ ++ I      R   ++    + G A +  +AR+ +    I +N
Sbjct: 78  KRYAILVEQEPTLDHVLSLDIESILERRLQTIVY---RKGLAKTAKQARQFIVHGHIAVN 134

Query: 381 NSIISNEKLQIKLQDFDSTGNI 402
              ++     + + + D+   +
Sbjct: 135 GKRVTAPAYLVSVAENDAIEYV 156


>gi|306820425|ref|ZP_07454061.1| ribosomal large subunit pseudouridine synthase B [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
 gi|304551500|gb|EFM39455.1| ribosomal large subunit pseudouridine synthase B [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
          Length = 232

 Score = 36.7 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIK--LSFGKKNHI 412
            +    A S  +A   +K   +KIN  ++ N    +   D     G I   +   KK + 
Sbjct: 6   FIATKTAYSRRKADELIKDKKVKINGEVLENLAYTVNDDDEVELDGRIISDIKV-KKYYY 64

Query: 413 I 413
           +
Sbjct: 65  L 65


>gi|255065751|ref|ZP_05317606.1| S4 RNA-binding domain protein [Neisseria sicca ATCC 29256]
 gi|255050069|gb|EET45533.1| S4 RNA-binding domain protein [Neisseria sicca ATCC 29256]
          Length = 91

 Score = 36.7 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 16/38 (42%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           E +  + L  L+  AG A S  +A+  +    +  N  
Sbjct: 22  EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGE 59


>gi|240047413|ref|YP_002960801.1| Pseudouridine synthase [Mycoplasma conjunctivae HRC/581]
 gi|239984985|emb|CAT04978.1| Pseudouridine synthase [Mycoplasma conjunctivae]
          Length = 233

 Score = 36.7 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 14/37 (37%), Gaps = 1/37 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                L  LI + G   S  +A + +K   + +N   
Sbjct: 2   DNKQRLQKLIAQVGLC-SRRQAEQMIKDGKVYLNGEK 37


>gi|68250225|ref|YP_249337.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           influenzae 86-028NP]
 gi|68058424|gb|AAX88677.1| ribosomal small subunit pseudouridine synthase A [Haemophilus
           influenzae 86-028NP]
          Length = 232

 Score = 36.7 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 20/33 (60%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++A + ++ +A+KIN  I+ +  +QI  +D  
Sbjct: 15  RSQATKAIRQSAVKINGEIVKSGAVQISQEDKI 47


>gi|90413479|ref|ZP_01221471.1| tryptophanyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325567|gb|EAS42044.1| tryptophanyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 339

 Score = 36.3 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 47/177 (26%), Gaps = 17/177 (9%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GHL   +    L +  +    L+     +         +      Q++  NI 
Sbjct: 19  TGP-LHLGHLVGSLQQRVLLQEQYDQTVLVADLQGL---------TDNGHNPQKVSSNIL 68

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +       +     KT   + +    L  +          S    N  +  E       
Sbjct: 69  NVVA-DYLAVGINPSKTTICLQSAIPALSELTMYYSNLVSISRLERNPTVKNEIKSKEFG 127

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           R     F    Y I QA D           L   G DQ   +    ++  RL     
Sbjct: 128 RSIPAGF--LTYPISQAADVTAFK----ATLIPVGEDQLPMLEQTNEIVRRLNHIAQ 178


>gi|296133141|ref|YP_003640388.1| tryptophanyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031719|gb|ADG82487.1| tryptophanyl-tRNA synthetase [Thermincola potens JR]
          Length = 328

 Score = 36.3 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 28/210 (13%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           LH GHL+ L     LQ   ++   ++    ++         +     + ++Q+NI   + 
Sbjct: 16  LHIGHLSVLENWVKLQDE-YECFFMVADWHAL---------TSNYADTHDMQQNI---RD 62

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-LSFESVRSRLKREQ 167
           +   ++  G   + + +          +   L   I     + R+    + +    K+ +
Sbjct: 63  LVIDWMAAGLDPSKSTIFVQSHVKEHAELHLLFSMITPLSWLERVPTYKDQIAQLGKQGK 122

Query: 168 SLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------- 218
            L+   F  Y +LQA D + + K     +   G DQ  ++    ++  R           
Sbjct: 123 DLNTYGFLGYPLLQAADIL-VYKANAVPV---GEDQLPHLEFTREVARRFNFMYKAEIFP 178

Query: 219 -PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            P+       LL    G KM K+ +  I +
Sbjct: 179 EPQPIIGQVALLPGIDGRKMSKSYNNFINI 208


>gi|126654182|ref|ZP_01725989.1| tryptophanyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589353|gb|EAZ83506.1| tryptophanyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 329

 Score = 36.3 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 4/138 (2%)

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +    S+  +      + +   ++S+S     Y  L A D +     Y+  +   G DQ
Sbjct: 92  MLQCVASIGELERMTQFKDKSHGKESVSAALLTYPPLMAADIL----LYNTNIVPVGDDQ 147

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
             +I    DL ER        LT P +         K+L        +            
Sbjct: 148 KQHIELTRDLAERFNKRYGDVLTIPEIQLPKAGARIKSLQEPTKKMSKSDPNTKATIRLL 207

Query: 263 NIDDADVVSFAKRLTTLP 280
           +            +T   
Sbjct: 208 DTAKDIEKKIKSAVTDSD 225


>gi|332798026|ref|YP_004459525.1| RNA-binding S4 domain-containing protein [Tepidanaerobacter sp.
           Re1]
 gi|332695761|gb|AEE90218.1| RNA-binding S4 domain protein [Tepidanaerobacter sp. Re1]
          Length = 73

 Score = 36.3 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             + L   +  +G  ++  EA+  +    +K+N  I +    ++K+ D
Sbjct: 12  ETINLDQFLKWSGIFSTGGEAKIAITEGNVKVNGEIETKRSRKLKVSD 59


>gi|86131033|ref|ZP_01049632.1| Tryptophanyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818444|gb|EAQ39604.1| Tryptophanyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 323

 Score = 36.3 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 37/305 (12%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   ++    +     ++    +    S+           ++    +++ N     
Sbjct: 15  HLGNLLGAIIPAIEMANNPANESFLFIADMHSLT----------QIKDGAQLRHN---TY 61

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              ++++ +G      +           +  +L   +  FF   R+    S + +  R +
Sbjct: 62  STAATWLAFGLDINKTVFYRQSD---VPQTAELTWYLSCFFPYQRLTLAHSFKDKADRLE 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTS 226
            ++   F Y +L A D +     YD  +   G DQ  +I    D+        K      
Sbjct: 119 DVNAGLFTYPMLMAADIL----LYDAEVVPVGKDQAQHIEMTRDVASRFHAATKTEVFVL 174

Query: 227 P---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN--IDDADVVSFAKR 275
           P          +    G KM K+    I +              +       + +     
Sbjct: 175 PEASHNEETMYIPGTDGAKMSKSKGNIIDIFLPDKKLRKQIMGIKTDSTPMEEPMETEGC 234

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
                   +    +++    N  +                       A +    + +  +
Sbjct: 235 NVFNLYKLLATPEQVERLRENYKRTDFGY---GHAKQAVYEVIIEKYAAQREKYAYYMDN 291

Query: 336 MPTIS 340
           +  I 
Sbjct: 292 LNEID 296


>gi|269960771|ref|ZP_06175142.1| Tryptophanyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834435|gb|EEZ88523.1| Tryptophanyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 340

 Score = 36.3 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 60/213 (28%), Gaps = 27/213 (12%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +T H    L+     +         +       ++  NI 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQTQHDQTILVADMQGL---------TDNAHNPSKVSSNIL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +       +     +T   + +    L  +          +    N  +  E      +
Sbjct: 70  NVVA-DYLAVGIDPIQTTICLQSQVPALAELTMYYSNLVSIARLERNPTVKNEIQSKGFE 128

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------- 217
           R     F    Y I QA D       +   L   G DQ   +    ++  ++        
Sbjct: 129 RSIPAGF--LTYPISQAADIT----GFHATLVPVGDDQLPMLEQTNEIVRKINHLGGKTI 182

Query: 218 ---TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                 L +    L +T    KM K++  AI L
Sbjct: 183 LKECRPLLSDAPRLPSTDGKNKMSKSMGNAINL 215


>gi|148377981|ref|YP_001256857.1| ribosomal large subunit pseudouridine synthaseC [Mycoplasma
           agalactiae PG2]
 gi|148292027|emb|CAL59419.1| Ribosomal large subunit pseudouridine synthaseC [Mycoplasma
           agalactiae PG2]
          Length = 284

 Score = 36.3 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 367 EAR--RHLKSNAIKINNSIISNEKLQIKLQD 395
           E R  R  +  +IK+NN  I++    +K  D
Sbjct: 28  EGRIYRLFRQKSIKVNNKRITDSNYVVKTGD 58


>gi|217976904|ref|YP_002361051.1| hemolysin A [Methylocella silvestris BL2]
 gi|217502280|gb|ACK49689.1| hemolysin A [Methylocella silvestris BL2]
          Length = 255

 Score = 36.3 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 16/37 (43%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +V  G   S  +A+  + +  ++I+   ++     +
Sbjct: 23  ALVARGLFESRAKAQEAIAAGLVRIDGKTVTKPSQTL 59


>gi|257066413|ref|YP_003152669.1| RNA-binding S4 domain-containing protein [Anaerococcus prevotii DSM
           20548]
 gi|256798293|gb|ACV28948.1| RNA-binding S4 domain protein [Anaerococcus prevotii DSM 20548]
          Length = 255

 Score = 36.3 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            +++ +V      S ++A+  + +  +K+++  I++    +      S
Sbjct: 183 NIVSSLVNT----SRSKAKDLINNRLVKVDHQTITDPSYNVDEGAILS 226


>gi|227512278|ref|ZP_03942327.1| tryptophanyl-tRNA synthetase II [Lactobacillus buchneri ATCC 11577]
 gi|227084453|gb|EEI19765.1| tryptophanyl-tRNA synthetase II [Lactobacillus buchneri ATCC 11577]
          Length = 338

 Score = 36.3 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 35/226 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G ++   ++    ++       D +R   + +    
Sbjct: 12  PTGK-LHIGHYVGSLKNRVELQNSGDYETFIMIADMQAL------TDNARDPEKIRHSLT 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +          +     K+  L+ +    L  +          S  + N  +  E  + 
Sbjct: 65  QVALDY----LAVGIDPEKSTILVQSQIPALPELTQHYSNLVTVSRLNRNPTVKNEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----- 216
              +   + F    Y I QA D               G DQ   +    ++         
Sbjct: 121 NFGQSVPVGFE--MYPISQAADITAFK----ATTVPVGDDQEPMLEQTREIVRSFNSIYK 174

Query: 217 ---------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
                      P       P L      KM K+L  AI+L+ +  +
Sbjct: 175 ADILVEPEGYFPPKGMGRIPGL--DGNAKMSKSLGNAIYLSDDEDT 218


>gi|261337851|ref|ZP_05965735.1| cytotoxin/hemolysin [Bifidobacterium gallicum DSM 20093]
 gi|270277318|gb|EFA23172.1| cytotoxin/hemolysin [Bifidobacterium gallicum DSM 20093]
          Length = 285

 Score = 36.3 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 6/32 (18%), Positives = 15/32 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
             +V+ G   S + A+R +    + ++   +S
Sbjct: 33  QALVRRGLVQSRSRAQRLIDEGRVFVDGKCVS 64


>gi|221195455|ref|ZP_03568510.1| ribosomal protein S4 [Atopobium rimae ATCC 49626]
 gi|221184642|gb|EEE17034.1| ribosomal protein S4 [Atopobium rimae ATCC 49626]
          Length = 197

 Score = 36.3 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ + GFA +  EAR+ ++   I +N   +     +IK  D  
Sbjct: 91  NVVFRLGFARTRKEARQTVRHGHITVNGQRVDIPSYRIKKGDVI 134


>gi|218551308|ref|YP_002385100.1| 23S rRNA pseudouridine synthase F [Escherichia fergusonii ATCC
           35469]
 gi|218358850|emb|CAQ91507.1| 23S rRNA pseudouridine synthase [Escherichia fergusonii ATCC 35469]
 gi|325499580|gb|EGC97439.1| 23S rRNA pseudouridine synthase F [Escherichia fergusonii ECD227]
          Length = 290

 Score = 36.3 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +              G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRATIGDQVKPGDVVKVNGRLI 59


>gi|148827048|ref|YP_001291801.1| malic enzyme [Haemophilus influenzae PittGG]
 gi|148718290|gb|ABQ99417.1| malic enzyme [Haemophilus influenzae PittGG]
          Length = 232

 Score = 36.3 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G     ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 10  NTGLT--RSQATKAIRQSAVKINGEIVKSGAVQISQKD 45


>gi|260061223|ref|YP_003194303.1| tryptophanyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785355|gb|EAR16524.1| tryptophanyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 322

 Score = 36.3 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 76/300 (25%), Gaps = 45/300 (15%)

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGI-------------FSSFIKYGTGKTDALMLNNET 130
           P+     R    S     N+  +  I              ++++ +G      +      
Sbjct: 25  PAIEMAGRPENDSFLFIANMHSLTQIKDGDTLRGNTLATAATWLAFGLDIEKTVFYRQSD 84

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                +  +L   +  FF   R+    S + +  R + ++   F Y +L A D +     
Sbjct: 85  ---VPQVTELAWYLSCFFPYQRLTLAHSFKDKADRLEDVNAGLFTYPMLMAADIL----L 137

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTL 241
           YD  L   G DQ  ++    D+  R           P          +    G KM K+ 
Sbjct: 138 YDADLVPVGKDQLQHLEMTRDVASRFHAQLGETFVMPEARLHENTMYIPGTDGQKMSKSR 197

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVS-----------FAKRLTTLPMSEIDRMAKL 290
              I + +   +                             +    T     E+    + 
Sbjct: 198 GNLIDIFQPDKALRKQIMGIVTDSTPLEEPKDPDSDTVFALYKILATPEQTEEMRANYEG 257

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                  AK     +           E                + +   +    +V+ G+
Sbjct: 258 GNYGYGHAK-----QALYECIREVFGEARERFEYYKQHPGEVEEALEKGAQKAAKVADGV 312


>gi|296109382|ref|YP_003616331.1| ribosomal protein S4 [Methanocaldococcus infernus ME]
 gi|295434196|gb|ADG13367.1| ribosomal protein S4 [Methanocaldococcus infernus ME]
          Length = 183

 Score = 36.3 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 55/170 (32%), Gaps = 15/170 (8%)

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           MG          +    P      W            ++       E+ +   +  K   
Sbjct: 1   MGDPRRRFPKKYETPNHP------WIKERIEREKELCRKYGLRRKREVWKAETILRKYRR 54

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---GLL 353
           +A+++I+          + A++A           I  +  PT+          +    L 
Sbjct: 55  QARRLISD------TTEQGAKEAQQLFNVLRRYGILRKDNPTLDDVLALTVEDILERRLQ 108

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           TL+ + G A +  +AR+ +    I IN   ++     + +++ DS    K
Sbjct: 109 TLVFRKGLARTPRQARQLIVHGHIAINGRRVTVPSYLVTVEEEDSIDYYK 158


>gi|310829557|ref|YP_003961914.1| ribosomal protein S4 [Eubacterium limosum KIST612]
 gi|308741291|gb|ADO38951.1| ribosomal protein S4 [Eubacterium limosum KIST612]
          Length = 209

 Score = 36.3 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 43/133 (32%), Gaps = 14/133 (10%)

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAK------KIIATEITTMVHGREEAEKAATAAMECF 327
           +  +T   +   R            K      ++   +    ++G  E + A    +   
Sbjct: 25  RCYSTNKCAFERRPTPPGQHGKRRTKLSEYGLQLREKQKVKRIYGVLEKQFAHYFDLAEK 84

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
              I   ++  I  ++ +         ++ + G ATS  EAR+ ++     +N   ++  
Sbjct: 85  QKGITGSNLLEILETRLD--------NVVYRLGLATSRKEARQLVQHAHFLVNGKKVNVP 136

Query: 388 KLQIKLQDFDSTG 400
              +K  D     
Sbjct: 137 SYLVKEGDTIEVK 149


>gi|258645664|ref|ZP_05733133.1| tryptophan--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403031|gb|EEW96578.1| tryptophan--tRNA ligase [Dialister invisus DSM 15470]
          Length = 331

 Score = 36.3 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 81/305 (26%), Gaps = 30/305 (9%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +  SL  G+    +      Q+T      ++                  +   Q  
Sbjct: 7   GIQPSG-SLTLGNYLGALKNFIPFQETAECYYCVV--------------NQHAITVPQNP 51

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
               E+ + + + +I  G     A +              ++        + RM  ++S 
Sbjct: 52  ALLHERTRNLAALYIAAGMDPKKATIFVQSEVPEHAMLGWMMICSAYVGEMERMTQYKSK 111

Query: 160 RSRLKREQSLS-FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
             + ++++         Y  L A D +     Y   L   G DQ  ++    DL ER   
Sbjct: 112 AQKEEKKEGFIPLGLLTYPPLMAADIL----LYQANLVPVGEDQRQHMEITRDLAERFNR 167

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                 T P +    G     +L        +         +  +  D  V    K +T 
Sbjct: 168 KYGEVFTIPEMWAPQGGARVMSLQEPTGKMSKSDDNEWATIHMLDTADVIVKKIKKAVTD 227

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                    +          +  ++  ++       +  +      +        + +  
Sbjct: 228 ---------SLAHVHYDKANQPGVSNLMSIHSAISGKTFEEIETMYDGQGYGTFKKDVAD 278

Query: 339 ISISK 343
           + + +
Sbjct: 279 LVVEE 283


>gi|324112367|gb|EGC06345.1| RNA pseudouridylate synthase [Escherichia fergusonii B253]
          Length = 290

 Score = 36.3 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +              G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRATIGDQVKPGDVVKVNGRLI 59


>gi|153854253|ref|ZP_01995552.1| hypothetical protein DORLON_01546 [Dorea longicatena DSM 13814]
 gi|149753028|gb|EDM62959.1| hypothetical protein DORLON_01546 [Dorea longicatena DSM 13814]
          Length = 80

 Score = 36.3 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 13/36 (36%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
              + L   +   G   S  EA+  ++   + +N  
Sbjct: 19  DEYIKLGQALKATGMVESGVEAKEVIQEGLVMVNGE 54


>gi|325295189|ref|YP_004281703.1| pseudouridine synthase, RluA family [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065637|gb|ADY73644.1| pseudouridine synthase, RluA family [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 313

 Score = 36.3 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 6/32 (18%), Positives = 16/32 (50%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S ++A+  ++   + IN  I+     ++K  +
Sbjct: 26  SRSQAKNLIEDGEVSINGRIVKKPSYKVKEGE 57


>gi|294787673|ref|ZP_06752917.1| heat shock protein 15 [Simonsiella muelleri ATCC 29453]
 gi|294483966|gb|EFG31649.1| heat shock protein 15 [Simonsiella muelleri ATCC 29453]
          Length = 137

 Score = 36.3 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +KDE    M L   +  A F  + + A R +    + +N   +   K  +
Sbjct: 6   NKDERDDTMRLDKWLWAARFFKTRSLASRQIDLGRVSVNGVKVKTSKYIV 55


>gi|283953680|ref|ZP_06371211.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794721|gb|EFC33459.1| RNA pseudouridine synthase family protein [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 253

 Score = 36.3 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 5/54 (9%)

Query: 364 STNEARRHLKSNAIKINNSI-ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA   +K   +KINN I + +++++   + F           KK      +
Sbjct: 14  SRREADELIKQGLVKINNKIALLSDEVKFDDKIFIKGK----RVQKKTQFSVII 63


>gi|242243012|ref|ZP_04797457.1| pseudouridylate synthase [Staphylococcus epidermidis W23144]
 gi|242233613|gb|EES35925.1| pseudouridylate synthase [Staphylococcus epidermidis W23144]
          Length = 230

 Score = 36.3 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             + +E ++ LK  A+K+N + + + KL +   
Sbjct: 12  VGTRSEVKQLLKKGAVKVNQNKVKSPKLHVNPN 44


>gi|160893409|ref|ZP_02074194.1| hypothetical protein CLOL250_00958 [Clostridium sp. L2-50]
 gi|156864804|gb|EDO58235.1| hypothetical protein CLOL250_00958 [Clostridium sp. L2-50]
          Length = 69

 Score = 36.3 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 19/62 (30%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + L   +  AGF  S  EA+  +    + +N  I +                     GKK
Sbjct: 11  IKLGQALKAAGFVESGVEAKEVISQGLVIVNGEIET-------------------RRGKK 51

Query: 410 NH 411
            +
Sbjct: 52  LY 53


>gi|296131553|ref|YP_003638800.1| RNA-binding S4 domain protein [Thermincola sp. JR]
 gi|296030131|gb|ADG80899.1| RNA-binding S4 domain protein [Thermincola potens JR]
          Length = 74

 Score = 36.3 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             + L   +  A   ++  EA+  +   +IK+N  I
Sbjct: 11  ETIKLDQFLKWATIVSTGGEAKNMIAGGSIKVNGEI 46


>gi|255034236|ref|YP_003084857.1| tryptophanyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254946992|gb|ACT91692.1| tryptophanyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 325

 Score = 36.3 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 96/328 (29%), Gaps = 45/328 (13%)

Query: 50  HAGHLTQLML-LFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G++   +     L K   ++    +    S+    + ++ + R          +E ++
Sbjct: 15  HLGNILGAIKPAIELSKNPQNESFFFIADLHSL---TTLKNGTER----------VEYVR 61

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRMLSFESVRSRLKRE 166
            I ++++ +G      +          ++    L    + F+    + +  S + + ++ 
Sbjct: 62  AIAATWLAFGFDYKKNVFWRQS----RVQEHTELGWYLNCFTPFPMLANATSFKDKSEKL 117

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------- 217
             ++   F Y +LQA D +     Y+  +   G DQ  ++    D+  R           
Sbjct: 118 ADVNAGLFTYPVLQAADIL----LYNANIIPVGKDQKQHLEMTKDIANRFNILAGEEILV 173

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS----- 271
                       +    G KM K+    I +           +   +   A         
Sbjct: 174 LPEPQIDERIMTIPGLDGQKMSKSYHNYIDIFLPENELKKITKKILSDSKALEEPKDPDS 233

Query: 272 ------FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
                 ++   +   +  +       G     AK+ +      +               E
Sbjct: 234 DITFQLYSLVASEADVETMRSNYVNGGYGYGHAKQALFECFMDVFAEPRRIFNYYMENTE 293

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLL 353
             +  +         I++D + +   +L
Sbjct: 294 ELESILVEGEAKARDIAQDTIGKVRKVL 321


>gi|254457029|ref|ZP_05070457.1| aminopeptidase N [Campylobacterales bacterium GD 1]
 gi|207085821|gb|EDZ63105.1| aminopeptidase N [Campylobacterales bacterium GD 1]
          Length = 856

 Score = 36.3 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 8/85 (9%), Positives = 26/85 (30%), Gaps = 9/85 (10%)

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR------RH 371
            +    +   D       + +  +  D       ++ ++       S N+ R        
Sbjct: 1   MSQMKTIYLKDYKKPEFKINSCELHFDLFEEFTTVINIMSINKLEKSENDIRLDAMDLEL 60

Query: 372 LKSNAIKINNSIISNEKLQIKLQDF 396
           ++   I +N+  +++ +  I     
Sbjct: 61  IE---IYLNDLKLNDTRYIIGEDSL 82


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.127    0.357 

Lambda     K      H
   0.267   0.0388    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,109,241,890
Number of Sequences: 14124377
Number of extensions: 162344184
Number of successful extensions: 421267
Number of sequences better than 10.0: 5387
Number of HSP's better than 10.0 without gapping: 3841
Number of HSP's successfully gapped in prelim test: 1546
Number of HSP's that attempted gapping in prelim test: 407788
Number of HSP's gapped (non-prelim): 5552
length of query: 418
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 276
effective length of database: 2,837,132,096
effective search space: 783048458496
effective search space used: 783048458496
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 82 (36.3 bits)