RPSBLAST alignment of GI: 254780949 and protein with PDBid: 2cyb
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Length = 323
Score = 69.7 bits (169), Expect = 1e-12
Identities = 47/336 (13%), Positives = 106/336 (31%), Gaps = 47/336 (13%)
Query: 12 LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
L R ++ EL ++ ++ AY+GY+ + +H GH+ + L LQ+ G +
Sbjct: 9 LITRN-AEEVVTEEELRQLIETKEKPRAYVGYEPSGE-IHLGHMMTVQKLMDLQEAGFEI 66
Query: 71 ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
I L+ + ++ ++ N + + + L+ +
Sbjct: 67 IVLLADIHAY-----LNEKGTFEEIAEVADYNKKVFIALGLDESRAKFVLGSEYQLSRDY 121
Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
L +K + S+ +R++ + Y ++QA D
Sbjct: 122 VLDVLKM---------ARITTLNRARRSMDEVSRRKEDPMVSQMIYPLMQALDIAH---- 168
Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL--- 247
L +GG DQ + + RL L +P+L G KM + I +
Sbjct: 169 LGVDLAVGGIDQRKIHMLARENLPRLGYSSPVCLHTPILVGLDGQKMSSSKGNYISVRDP 228
Query: 248 --------NKEMTSP----------YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-A 288
K + V AK + + + +
Sbjct: 229 PEEVERKIRKAYCPAGVVEENPILDIAKYHILPRFGKIVVERDAKFGGDVEYASFEELAE 288
Query: 289 KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATA 322
+ +++ + K +A + ++ + ++ +
Sbjct: 289 DFKSGQLHPLDLKIAVAKYLNMLLE--DARKRLGVS 322