RPSBLAST alignment of GI: 254780949 and protein with PDBid: 2cyc
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics, NPPSFA; HET: TYR; 2.20A {Pyrococcus horikoshii OT3} Length = 375
Score = 115 bits (289), Expect = 1e-26
Identities = 39/261 (14%), Positives = 82/261 (31%), Gaps = 15/261 (5%)
Query: 12 LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHK 69
L + ++ L L G + YIG++++ +H G L + QK G K
Sbjct: 9 LVLKKPTEEVLTVENLRHLFEIGAPLQHYIGFEISGY-IHLGTGLMAGAKIADFQKAGIK 67
Query: 70 PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
+ S I D D ++ ++ ++ G +
Sbjct: 68 TRVFLADWHSWINDKLGGDLEV--IQEVALKYFKVGMEKSIEVM---GGDPKKVEFVLAS 122
Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
L Y + +I +++R++ ++ R E ++ F + Y ++Q D
Sbjct: 123 EILEKGDYWQTVIDISKNVTLSRVMRSITIMGRQMGE-AIDFAKLIYPMMQVADI----F 177
Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK--MGKTLSGAIWL 247
+ G DQ + I++ ++L+ + L A +G +
Sbjct: 178 YQGVTIAHAGMDQRKAHVIAIEVAQKLRYHPIVHEGEKLKPVAVHHHLLLGLQEPPKWPI 237
Query: 248 NKEMTSPYNFWQYWRNIDDAD 268
E Q +
Sbjct: 238 ESEEEFKEIKAQMKMSKSKPY 258