RPSBLAST alignment of GI: 254780949 and protein with PDBid: 2cyc

>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics, NPPSFA; HET: TYR; 2.20A {Pyrococcus horikoshii OT3} Length = 375
 Score =  115 bits (289), Expect = 1e-26
 Identities = 39/261 (14%), Positives = 82/261 (31%), Gaps = 15/261 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHK 69
           L  +    ++     L  L   G  +  YIG++++   +H G  L     +   QK G K
Sbjct: 9   LVLKKPTEEVLTVENLRHLFEIGAPLQHYIGFEISGY-IHLGTGLMAGAKIADFQKAGIK 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    S I D    D     ++   ++     ++         G        +   
Sbjct: 68  TRVFLADWHSWINDKLGGDLEV--IQEVALKYFKVGMEKSIEVM---GGDPKKVEFVLAS 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
             L    Y   + +I    +++R++   ++  R   E ++ F +  Y ++Q  D      
Sbjct: 123 EILEKGDYWQTVIDISKNVTLSRVMRSITIMGRQMGE-AIDFAKLIYPMMQVADI----F 177

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK--MGKTLSGAIWL 247
                +   G DQ    +  I++ ++L+   +      L   A      +G        +
Sbjct: 178 YQGVTIAHAGMDQRKAHVIAIEVAQKLRYHPIVHEGEKLKPVAVHHHLLLGLQEPPKWPI 237

Query: 248 NKEMTSPYNFWQYWRNIDDAD 268
             E        Q   +     
Sbjct: 238 ESEEEFKEIKAQMKMSKSKPY 258