HHsearch alignment for GI: 254780952 and conserved domain: CHL00095

>CHL00095 clpC Clp protease ATP binding subunit.
Probab=92.04  E-value=0.44  Score=26.17  Aligned_cols=53  Identities=17%  Similarity=0.396  Sum_probs=25.3

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHCCCCCH----HHEEEEEECHHHH-----HHHHHHHHHHC
Q ss_conf             699958898835899999999998089997----8867621147999-----99999999851
Q gi|254780952|r   46 LLILAGAGTGKTTVLIARMLHLICHKEIPP----SKILAMTFTNQAI-----QEMKNRLACYL   99 (685)
Q Consensus        46 ~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p----~~Il~iTFT~~AA-----~el~~Ri~~~l   99 (685)
T Consensus       203 piLvGepGVGKTA-IvEGLA~rI~~g~VP~~L~~~~i~sLDl~~L~AGtkyRGeFEeRlk~il  264 (823)
T CHL00095        203 PILIGEPGVGKTA-IAEGLAQRIANRDVPDILEDKLVLTLDIGLLLAGTKYRGEFEERIKKIM  264 (823)
T ss_pred             CEEECCCCCCHHH-HHHHHHHHHHCCCCCHHHCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             5023799987999-9999999760889986875993688428877533422267999999999