HHsearch alignment for GI: 254780952 and conserved domain: CHL00095
>CHL00095 clpC Clp protease ATP binding subunit.
Probab=92.04 E-value=0.44 Score=26.17 Aligned_cols=53 Identities=17% Similarity=0.396 Sum_probs=25.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCCH----HHEEEEEECHHHH-----HHHHHHHHHHC
Q ss_conf 699958898835899999999998089997----8867621147999-----99999999851
Q gi|254780952|r 46 LLILAGAGTGKTTVLIARMLHLICHKEIPP----SKILAMTFTNQAI-----QEMKNRLACYL 99 (685)
Q Consensus 46 ~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p----~~Il~iTFT~~AA-----~el~~Ri~~~l 99 (685)
T Consensus 203 piLvGepGVGKTA-IvEGLA~rI~~g~VP~~L~~~~i~sLDl~~L~AGtkyRGeFEeRlk~il 264 (823)
T CHL00095 203 PILIGEPGVGKTA-IAEGLAQRIANRDVPDILEDKLVLTLDIGLLLAGTKYRGEFEERIKKIM 264 (823)
T ss_pred CEEECCCCCCHHH-HHHHHHHHHHCCCCCHHHCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 5023799987999-9999999760889986875993688428877533422267999999999