HHsearch alignment for GI: 254780952 and conserved domain: COG0513

>COG0513 SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].

Probab=94.91  E-value=0.14  Score=29.66  Aligned_cols=70  Identities=20%  Similarity=0.135  Sum_probs=45.7

Q ss_pred             CCHHHHHHHHCCCC-CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHH-EEEEEECHHHHHHHHHHHHHHC
Q ss_conf             99889999853898-9669995889883589999999999808999788-6762114799999999999851
Q gi|254780952|r   30 LNAQQTHAVTIPDD-TPLLILAGAGTGKTTVLIARMLHLICHKEIPPSK-ILAMTFTNQAIQEMKNRLACYL   99 (685)
Q Consensus        30 Ln~~Q~~av~~~~~-~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~-Il~iTFT~~AA~el~~Ri~~~l   99 (685)
T Consensus        52 pt~IQ~~~iP~~l~g~Dvi~~A~TGsGKT~Af~lP~l~~i~~~~~~~~~~aLil~PTRELA~Qi~~~~~~~~  123 (513)
T COG0513          52 PTPIQLAAIPLILAGRDVLGQAQTGTGKTAAFLLPLLQKILKSVERKYVSALILAPTRELAVQIAEELRKLG  123 (513)
T ss_pred             CCHHHHHHCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
T ss_conf             898999658776369997998689871789999999999740045577756997799999999999999998