HHsearch alignment for GI: 254780952 and conserved domain: COG1061

>COG1061 SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].

Probab=96.50  E-value=0.01  Score=37.35  Aligned_cols=65  Identities=22%  Similarity=0.253  Sum_probs=47.5

Q ss_pred             CCCHHHHHHHHCCC-----CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCC
Q ss_conf             29988999985389-----8966999588988358999999999980899978867621147999999999998516
Q gi|254780952|r   29 GLNAQQTHAVTIPD-----DTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLG  100 (685)
Q Consensus        29 ~Ln~~Q~~av~~~~-----~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~  100 (685)
T Consensus        36 ~lr~yQ~~al~a~~~~~~~~~~gvivlpTGaGKT~va~~~~~~~----~---~~~Lvlv~~~~L~~Qw~~~~~~~~~  105 (442)
T COG1061          36 ELRPYQEEALDALVKNRRTERRGVIVLPTGAGKTVVAAEAIAEL----K---RSTLVLVPTKELLDQWAEALKKFLL  105 (442)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH----C---CCEEEEECCHHHHHHHHHHHHHHCC
T ss_conf             88599999999999622257867999679998899999999982----6---9889997829999999999997348