HHsearch alignment for GI: 254780952 and conserved domain: COG1203

>COG1203 CRISPR-associated helicase Cas3 [Defense mechanisms].
Probab=90.91  E-value=0.9  Score=24.06  Aligned_cols=74  Identities=22%  Similarity=0.265  Sum_probs=43.9

Q ss_pred             CHHHHHHHHCC---CC-C-CEEEEECCCCCHHHHHHHHHHHHHHCC-CCCHHHEEEEEECHHHHHHHHHHHHHHCCCCCC
Q ss_conf             98899998538---98-9-669995889883589999999999808-999788676211479999999999985164587
Q gi|254780952|r   31 NAQQTHAVTIP---DD-T-PLLILAGAGTGKTTVLIARMLHLICHK-EIPPSKILAMTFTNQAIQEMKNRLACYLGEKIP  104 (685)
Q Consensus        31 n~~Q~~av~~~---~~-~-~~lV~AgaGsGKT~~L~~ri~~Ll~~~-~~~p~~Il~iTFT~~AA~el~~Ri~~~l~~~~~  104 (685)
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~vl~aPTG~GKT~asl~~a~~~~~~~~~~~~r~i~vlP~-~t~ie~~~~r~~~~~~~~~~  275 (733)
T COG1203         197 YELQEKALELILRLEKRSLLVVLEAPTGYGKTEASLILALALLDEKIKLKSRVIYVLPF-RTIIEDMYRRAKEIFGLFSV  275 (733)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCH-HHHHHHHHHHHHHHHCCCCC
T ss_conf             35567999998732255751899916888719999999999753113545628996558-99999999999875123554


Q ss_pred             E
Q ss_conf             8
Q gi|254780952|r  105 R  105 (685)
Q Consensus       105 ~  105 (685)
T Consensus       276 ~  276 (733)
T COG1203         276 I  276 (733)
T ss_pred             C
T ss_conf             3