HHsearch alignment for GI: 254780952 and conserved domain: COG2805
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=95.41 E-value=0.038 Score=33.51 Aligned_cols=48 Identities=25% Similarity=0.378 Sum_probs=24.9
Q ss_pred CCCCHHHHHH-CCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 8321588876-299889999853898966999588988358999999999
Q gi|254780952|r 19 VPSCVPNYLK-GLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHL 67 (685)
Q Consensus 19 ~~~~~~~~l~-~Ln~~Q~~av~~~~~~~~lV~AgaGsGKT~~L~~ri~~L 67 (685)
T Consensus 101 Ip~~i~~~e~LglP~i~~~~~~-~~~GLILVTGpTGSGKSTTlAamId~i 149 (353)
T COG2805 101 IPSKIPTLEELGLPPIVRELAE-SPRGLILVTGPTGSGKSTTLAAMIDYI 149 (353)
T ss_pred CCCCCCCHHHCCCCHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 6766899878199779999982-879669986799996787999999998