HHsearch alignment for GI: 254780952 and conserved domain: PRK04537
>PRK04537 ATP-dependent RNA helicase RhlB; Provisional.
Probab=95.35 E-value=0.088 Score=30.97 Aligned_cols=71 Identities=15% Similarity=0.252 Sum_probs=46.1
Q ss_pred CCHHHHHHHHCC-CCCCEEEEECCCCCHHHHHHHHHH-HHHHCCCC---CH--HHEEEEEECHHHHHHHHHHHHHHCC
Q ss_conf 998899998538-989669995889883589999999-99980899---97--8867621147999999999998516
Q gi|254780952|r 30 LNAQQTHAVTIP-DDTPLLILAGAGTGKTTVLIARML-HLICHKEI---PP--SKILAMTFTNQAIQEMKNRLACYLG 100 (685)
Q Consensus 30 Ln~~Q~~av~~~-~~~~~lV~AgaGsGKT~~L~~ri~-~Ll~~~~~---~p--~~Il~iTFT~~AA~el~~Ri~~~l~ 100 (685)
T Consensus 32 PTpIQ~~aIP~iL~GkDvi~~A~TGSGKTLAYlLPiL~~Ll~~~~l~~~~~~~p~aLILvPTRELA~QI~~~~~~l~~ 109 (574)
T PRK04537 32 CTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLSRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGA 109 (574)
T ss_pred CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHC
T ss_conf 999999999999579988998489888999999999999983744345778996199977989999999999999864