HHsearch alignment for GI: 254780952 and conserved domain: PRK04537

>PRK04537 ATP-dependent RNA helicase RhlB; Provisional.
Probab=95.35  E-value=0.088  Score=30.97  Aligned_cols=71  Identities=15%  Similarity=0.252  Sum_probs=46.1

Q ss_pred             CCHHHHHHHHCC-CCCCEEEEECCCCCHHHHHHHHHH-HHHHCCCC---CH--HHEEEEEECHHHHHHHHHHHHHHCC
Q ss_conf             998899998538-989669995889883589999999-99980899---97--8867621147999999999998516
Q gi|254780952|r   30 LNAQQTHAVTIP-DDTPLLILAGAGTGKTTVLIARML-HLICHKEI---PP--SKILAMTFTNQAIQEMKNRLACYLG  100 (685)
Q Consensus        30 Ln~~Q~~av~~~-~~~~~lV~AgaGsGKT~~L~~ri~-~Ll~~~~~---~p--~~Il~iTFT~~AA~el~~Ri~~~l~  100 (685)
T Consensus        32 PTpIQ~~aIP~iL~GkDvi~~A~TGSGKTLAYlLPiL~~Ll~~~~l~~~~~~~p~aLILvPTRELA~QI~~~~~~l~~  109 (574)
T PRK04537         32 CTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLSRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGA  109 (574)
T ss_pred             CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHC
T ss_conf             999999999999579988998489888999999999999983744345778996199977989999999999999864