HHsearch alignment for GI: 254780952 and conserved domain: PRK07261
>PRK07261 topology modulation protein; Provisional.
Probab=94.94 E-value=0.03 Score=34.18 Aligned_cols=62 Identities=16% Similarity=0.267 Sum_probs=38.0
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCCH---HHEEEE-EECHHHHHHHHHHHHHHCCCCCCEE--EEHHHH
Q ss_conf 699958898835899999999998089997---886762-1147999999999998516458789--617899
Q gi|254780952|r 46 LLILAGAGTGKTTVLIARMLHLICHKEIPP---SKILAM-TFTNQAIQEMKNRLACYLGEKIPRI--QTFHSF 112 (685)
Q Consensus 46 ~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p---~~Il~i-TFT~~AA~el~~Ri~~~l~~~~~~i--~T~Hsf 112 (685)
T Consensus 3 I~IiG~sGsGKST-lAr~L~~~~---~ip~~~LD~l~w~p~w~~~~~~e~~~~~~~~~~~~~-WIiDGny~~~ 70 (171)
T PRK07261 3 IAIIGYSGSGKST-LARFLGQHY---NCPVLHLDQLHFSSNWQERDDDDMIADISNFLLKQD-WIIEGNYSNC 70 (171)
T ss_pred EEEECCCCCCHHH-HHHHHHHHH---CCCEEEECCEEECCCCEECCHHHHHHHHHHHHHCCC-EEEECCCCCH
T ss_conf 9998899986899-999999987---979797022788899988889999999999984898-7994785124