HHsearch alignment for GI: 254780952 and conserved domain: PRK08118

>PRK08118 topology modulation protein; Reviewed.
Probab=94.40  E-value=0.04  Score=33.30  Aligned_cols=66  Identities=12%  Similarity=0.177  Sum_probs=37.3

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEE-ECHHHHHHHHHHHHHHCCCCCCEE--EEHHHH
Q ss_conf             66999588988358999999999980899978867621-147999999999998516458789--617899
Q gi|254780952|r   45 PLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMT-FTNQAIQEMKNRLACYLGEKIPRI--QTFHSF  112 (685)
Q Consensus        45 ~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iT-FT~~AA~el~~Ri~~~l~~~~~~i--~T~Hsf  112 (685)
T Consensus         3 rI~IiG~~GsGKST-lAr~L~~~~~ip~~~LD~l~w~~~w~~~~~~e~~~~~~~~~~~~-~WIidGny~~~   71 (167)
T PRK08118          3 KIILIGSGGSGKST-LARQLGEKLNIPVHHLDALFWKPNWEGVPKEEQRTVQNELVKED-EWIIDGNYGGT   71 (167)
T ss_pred             EEEEECCCCCCHHH-HHHHHHHHHCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHCC-CEEEECCCHHH
T ss_conf             79998899987999-99999998896979644347668994688899999999998389-87994771779