HHsearch alignment for GI: 254780952 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=95.21  E-value=0.052  Score=32.52  Aligned_cols=46  Identities=26%  Similarity=0.281  Sum_probs=28.9

Q ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHH
Q ss_conf             8989669995889883589999999999808999788676211479999
Q gi|254780952|r   41 PDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQ   89 (685)
Q Consensus        41 ~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~   89 (685)
T Consensus        22 p~g~~~LV~G~pGsGKTtla~QfL~~Ga~~~---GE~~lyitl~E~~~~   67 (501)
T PRK09302         22 PKGRPTLVSGTAGTGKTLFALQFLHNGIKSF---GEPGVFVTFEESPED   67 (501)
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHHHC---CCCEEEEECCCCHHH
T ss_conf             8997799983899999999999999998855---997899985799999