HHsearch alignment for GI: 254780952 and conserved domain: PRK10590
>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=96.61 E-value=0.013 Score=36.68 Aligned_cols=70 Identities=21% Similarity=0.299 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHCC-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC-----CHHHEEEEEECHHHHHHHHHHHHHH
Q ss_conf 2998899998538-98966999588988358999999999980899-----9788676211479999999999985
Q gi|254780952|r 29 GLNAQQTHAVTIP-DDTPLLILAGAGTGKTTVLIARMLHLICHKEI-----PPSKILAMTFTNQAIQEMKNRLACY 98 (685)
Q Consensus 29 ~Ln~~Q~~av~~~-~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~-----~p~~Il~iTFT~~AA~el~~Ri~~~ 98 (685)
T Consensus 23 ~PTpIQ~~aIP~iL~GrDvl~~A~TGSGKTlAflLPil~~l~~~~~~~~~~~~~~aLIL~PTRELA~Qi~~~~~~l 98 (457)
T PRK10590 23 EPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY 98 (457)
T ss_pred CCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf 9999999999999779988998898118999999999999863676544568824999768799999999999974