HHsearch alignment for GI: 254780952 and conserved domain: PRK11889
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional.
Probab=92.69 E-value=0.6 Score=25.25 Aligned_cols=48 Identities=29% Similarity=0.457 Sum_probs=22.3
Q ss_pred CCCCCCCHH-HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 875465024-668888788773984689997641046799778543343433356
Q gi|254780952|r 438 CPKRGIGKE-SLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIR 491 (685)
Q Consensus 438 ~p~~gi~~~-~l~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 491 (685)
T Consensus 248 GPT-GVGKTTTIAKLAArf~~~~Kk-----VALITtDTYRIGAVEQLKTYAeIMg 296 (436)
T PRK11889 248 GPT-GVGKTTTLAKMAWQFHGKKKT-----VGFITTDHSRIGTVQQLQDYVKTIG 296 (436)
T ss_pred CCC-CCCHHHHHHHHHHHHHCCCCE-----EEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 999-988899999999998616980-----8999806634769999999999849