HHsearch alignment for GI: 254780952 and conserved domain: PRK11889

>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional.
Probab=92.69  E-value=0.6  Score=25.25  Aligned_cols=48  Identities=29%  Similarity=0.457  Sum_probs=22.3

Q ss_pred             CCCCCCCHH-HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             875465024-668888788773984689997641046799778543343433356
Q gi|254780952|r  438 CPKRGIGKE-SLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIR  491 (685)
Q Consensus       438 ~p~~gi~~~-~l~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~  491 (685)
T Consensus       248 GPT-GVGKTTTIAKLAArf~~~~Kk-----VALITtDTYRIGAVEQLKTYAeIMg  296 (436)
T PRK11889        248 GPT-GVGKTTTLAKMAWQFHGKKKT-----VGFITTDHSRIGTVQQLQDYVKTIG  296 (436)
T ss_pred             CCC-CCCHHHHHHHHHHHHHCCCCE-----EEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf             999-988899999999998616980-----8999806634769999999999849