HHsearch alignment for GI: 254780952 and conserved domain: PRK13709

Probab=97.71  E-value=0.00012  Score=50.75  Aligned_cols=88  Identities=23%  Similarity=0.277  Sum_probs=58.5

Q ss_pred             CCCCCHHHHHHCCCHHHHHHHHCCC---CCCEEEEECCCCCHHHHHHHHHHHHHHC--CCCCHHHEEEEEECHHHHHHHH
Q ss_conf             6832158887629988999985389---8966999588988358999999999980--8999788676211479999999
Q gi|254780952|r   18 FVPSCVPNYLKGLNAQQTHAVTIPD---DTPLLILAGAGTGKTTVLIARMLHLICH--KEIPPSKILAMTFTNQAIQEMK   92 (685)
Q Consensus        18 ~~~~~~~~~l~~Ln~~Q~~av~~~~---~~~~lV~AgaGsGKT~~L~~ri~~Ll~~--~~~~p~~Il~iTFT~~AA~el~   92 (685)
T Consensus       957 L~~~v~~s~l~~LT~GQK~At~LIltT~DRFvaIQGyAGVGKTTql~a-vi~ai~tl~~~~rp-qViGLAPTH~AV~EL~ 1034 (1756)
T PRK13709        957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA-VMSAVNMLPESERP-RVVGLGPTHRAVGEMR 1034 (1756)
T ss_pred             CHHHCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH-HHHHHHHCCCCCCC-CEEEECCHHHHHHHHH
T ss_conf             023275566635785778777563247872599870355666778999-99999725513587-2675675178999999


Q ss_pred             HHHHHHCCCCCCEEEEHHHHHHH
Q ss_conf             99998516458789617899999
Q gi|254780952|r   93 NRLACYLGEKIPRIQTFHSFCAS  115 (685)
Q Consensus        93 ~Ri~~~l~~~~~~i~T~Hsf~~~  115 (685)
T Consensus      1035 ~--------~GV~AQTlaSfL~d 1049 (1756)
T PRK13709       1035 S--------AGVDAQTLASFLHD 1049 (1756)
T ss_pred             H--------CCCCHHHHHHHHHH
T ss_conf             6--------49607899999862