HHsearch alignment for GI: 254780952 and conserved domain: PRK13889

>PRK13889 conjugal transfer relaxase TraA; Provisional.
Probab=98.16  E-value=1.1e-05  Score=57.66  Aligned_cols=44  Identities=25%  Similarity=0.490  Sum_probs=28.3

Q ss_pred             EEECCCCCCCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECC
Q ss_conf             96113455669836984685766842212996787899999999985864116998313
Q gi|254780952|r  574 MTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHLFYTI  632 (685)
Q Consensus       574 ~TIH~SKGLEfd~V~i~gl~~g~~P~~~~~~~~~~eEErRL~YVA~TRAk~~L~l~~~~  632 (685)
T Consensus       660 ~TIHKSQG~TVDra~VLat-----~~---m-------drhltYVAMTRHRe~~~ly~~~  703 (992)
T PRK13889        660 ATIHKAQGMTVDRTHVLAT-----PG---M-------DAHGSYVALSRHRDGVDLHYGR  703 (992)
T ss_pred             HHHHHHCCCCCCEEEEECC-----CC---C-------CHHHHHHHHCCCCCCCHHEECH
T ss_conf             6657633864014899367-----88---5-------3555242310242211110013