HHsearch alignment for GI: 254780952 and conserved domain: TIGR02782
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=97.13 E-value=0.0011 Score=44.09 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=21.9
Q ss_pred EHHHHHHHHH---HHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 0253210775---1134688787751111267887599995
Q gi|254780952|r 234 PYIMVDEYQD---INTPQYLLLRLLCQKEDSKQGARICCVG 271 (685)
Q Consensus 234 ~~ilVDEfQD---tn~~Q~~ll~~L~~~~~~~~~~~l~vVG 271 (685)
T Consensus 111 ~vfTLDdYV~~gimtaaQ~d~l~~Av~ar-----~NIlv~G 146 (315)
T TIGR02782 111 RVFTLDDYVEAGIMTAAQRDVLREAVAAR-----KNILVVG 146 (315)
T ss_pred CCCCCHHHHHHCCCCHHHHHHHHHHHHHC-----CCEEEEC
T ss_conf 10470777640445578999999999712-----9889981