>TIGR02785 addA_Gpos recombination helicase AddA; InterPro: IPR014152 AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologues between the Firmicutes and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species..

Probab=100.00 E-value=0 Score=816.42 Aligned_cols=595 Identities=26% Similarity=0.424 Sum_probs=451.8 Q ss_pred CHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC--CCCHHHEEEEEECHHHHHHHHHHHHHHCCC------- Q ss_conf 98899998538989669995889883589999999999808--999788676211479999999999985164------- Q gi|254780952|r 31 NAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHK--EIPPSKILAMTFTNQAIQEMKNRLACYLGE------- 101 (685) Q Consensus 31 n~~Q~~av~~~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~--~~~p~~Il~iTFT~~AA~el~~Ri~~~l~~------- 101 (685) T Consensus 3 T~~Q~~AI~-~~G~nILVsAsAGSGKTaVLVERii~~i~~gE~pvdiDrLLVVTFTnaAA~EMK~Ri~~~l~k~l~~~~~ 81 (1295) T TIGR02785 3 TDEQWQAIY-DRGQNILVSASAGSGKTAVLVERIIKKILRGENPVDIDRLLVVTFTNAAAREMKERIEEALQKELAQEPD 81 (1295) T ss_pred CHHHHHHHH-HCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 788899996-3688647653226661478999999996478877020210367888999999999999999997436888 Q ss_pred ----------------------CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHHHH---------- Q ss_conf ----------------------587896178999999998499848798980728-99999999999997---------- Q gi|254780952|r 102 ----------------------KIPRIQTFHSFCASILRKHGEVVGLPTDFAILD-SAESRTIIKQLLKD---------- 148 (685) Q Consensus 102 ----------------------~~~~i~T~Hsf~~~il~~~~~~~g~~~~~~i~~-~~~~~~~~~~~~~~---------- 148 (685) T Consensus 82 d~P~~~ta~~~~~hl~~QL~lL~~A~ISTlhsFCL~Vir~~YYllDlDP~FRil~nd~e~~LL~~E~~~d~~E~~y~~~d 161 (1295) T TIGR02785 82 DDPERRTAVDNSKHLRRQLALLNKANISTLHSFCLKVIRKHYYLLDLDPSFRILTNDTEELLLLKEVVDDVLEEEYYKED 161 (1295) T ss_pred CCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 87123204437899999996446765104578999997666043553788765775678889887579999999852015 Q ss_pred ----------CCC-CCCCCC-----------------HHHHHHH-----------------------------HHHHHHC Q ss_conf ----------399-854789-----------------8999999-----------------------------8667541 Q gi|254780952|r 149 ----------LQI-DDKDYD-----------------PHEVIEK-----------------------------IDYWQNR 171 (685) Q Consensus 149 ----------~~~-~~~~~~-----------------~~~~~~~-----------------------------i~~~k~~ 171 (685) T Consensus 162 ~~~F~~L~~~f~~rDR~D~~L~~li~~lY~F~~a~P~Pe~WL~~l~~~Y~V~~~~~~e~~~~~~~ik~~~~~~~~~~~~~ 241 (1295) T TIGR02785 162 NEAFFELVDNFSGRDRSDDGLRDLILKLYDFARATPNPEKWLNKLAEAYEVKEDFLIESKLLQQQIKDLLKNELEGLQEK 241 (1295) T ss_pred CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 15899999865078977012899999999997449986788862655422340467888999999899999999999999 Q ss_pred ------------C-CC---------------------------------------------------------------- Q ss_conf ------------5-89---------------------------------------------------------------- Q gi|254780952|r 172 ------------G-WN---------------------------------------------------------------- 174 (685) Q Consensus 172 ------------~-~~---------------------------------------------------------------- 174 (685) T Consensus 242 l~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~e~~~~~~~~~~~l~~ 321 (1295) T TIGR02785 242 LQKALELFMAEDGELAPKLENFQLEAQNIKELIEEKLAQEDWNELREAVALVKFENLKRKAAKKAEEKEDLLEEAKKLRE 321 (1295) T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH T ss_conf 99999865432026631689999999999999998885436999999986402443143101257441479999998874 Q ss_pred -----------------HHHHHHCCCCHHHH-------HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC-------- Q ss_conf -----------------64612114653899-------9999999755777753001110001245430120-------- Q gi|254780952|r 175 -----------------PKDIPQSSLTEDAE-------IPKAIYIQYVAYLQKTKSCDFGGLIIKTIEVLHH-------- 222 (685) Q Consensus 175 -----------------~~~~~~~~~~~~~~-------~~~~iy~~Y~~~l~~~~~lDf~Dll~~a~~ll~~-------- 222 (685) T Consensus 322 ~~K~~~~~l~~~~F~~~~~~~~~~~~G~~~p~v~~l~~~~~~f~~~f~~~KR~kn~~DF~DlEH~~L~IL~~~~~~GE~~ 401 (1295) T TIGR02785 322 EAKKQLAKLKEDYFARDEEELLRDMQGELKPIVKELAQLVKDFIEAFGAEKREKNVLDFSDLEHYALQILSNENESGERK 401 (1295) T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHH T ss_conf 44589999998731438789999860202799999999999999999997653788640276899999723588887422 Q ss_pred H-HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHCCCCCCHHHHHHHCCCC----- Q ss_conf 6-8897401221025321077511346887877511112678875999953068863113322013455420576----- Q gi|254780952|r 223 P-HVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFK----- 296 (685) Q Consensus 223 ~-~v~~~~~~r~~~ilVDEfQDtn~~Q~~ll~~L~~~~~~~~~~~l~vVGD~dQsIY~fRGA~~~~~~~f~~~f~----- 296 (685) T Consensus 402 ~s~~~~~YrekF~EvlVDEYQDtN~~QE~IL~~~~~g~~--~~gNlFMVGDVKQSIY~FRqAdP~LFl~KY~~f~~eg~~ 479 (1295) T TIGR02785 402 PSEAAEFYREKFKEVLVDEYQDTNLVQESILQLLKRGEE--EEGNLFMVGDVKQSIYRFRQADPSLFLEKYKRFAQEGNE 479 (1295) T ss_pred HHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCC--CCCCEEEECCEEECCCCCCCCCHHHHHHHHCCCCCCCCC T ss_conf 799999986448546751434612799999998348624--777744434442043631025713578750121466667 Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHH----HCC-----------HHHHHHCCCC--------------CCCC---E Q ss_conf 640678761267514678752024443432----010-----------1222210235--------------5674---4 Q gi|254780952|r 297 DANIIKLEQNYRSTTHILNTANKLISHNKQ----RFD-----------KKLFTQRDCH--------------DDAK---V 344 (685) Q Consensus 297 ~~~~i~L~~NyRS~~~Ii~~an~li~~n~~----r~~-----------k~l~~~~~~~--------------~~~~---v 344 (685) T Consensus 480 ~G~rI~L~~NFRSr~eVl~~TN~~F~~lMd~~vGeIdYD~~a~L~~G~~~Y~~~~~~~~~~~~~~~~~~~~~e~~~~d~~ 559 (1295) T TIGR02785 480 HGKRIDLAENFRSRKEVLDATNYLFKQLMDEEVGEIDYDEEAQLKFGAAKYPENPDKKTELLLYEKLAIEEEEEEEIDEE 559 (1295) T ss_pred CCCEECHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 88440032147874215556538999972888886556724572268767788775024568888775431133457765 Q ss_pred EEEECCCCCHHCCCCCHHHHHHHHHC-------------CCCCHHHHEECCCH-HHHHHHHHHHCCCCCEEEEC-C-CCC Q ss_conf 88731553100000000136665311-------------36530311101001-47889987520233203203-3-100 Q gi|254780952|r 345 SIHVSQSDNSELSTIIQEIINIQNTG-------------MSLNNIAILVRTSW-QTRKFEDAFLEQEIPHKVIG-G-SFY 408 (685) Q Consensus 345 ~~~~~~~~~~Ea~~Ia~~I~~l~~~g-------------~~~~diAVL~Rtn~-~~~~l~~~L~~~gIP~~~~g-~-~~f 408 (685) T Consensus 560 e~~i~d~~~~E~~~~~~~Ik~li~~~~~vYD~~~g~~R~~~Y~DIviL~rs~~k~n~~I~~~f~~~~IPV~~nG~~~nYF 639 (1295) T TIGR02785 560 ELEILDKAQQEATVVAERIKALIKEGFKVYDKKTGEYRPVKYRDIVILTRSRGKWNLQIMEEFKKYGIPVFVNGDAENYF 639 (1295) T ss_pred CCHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEECCCCCCHH T ss_conf 53010451556788999999997468620032138626602556788678986433799999984899879727765607 Q ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC--------CCHHHH Q ss_conf 011210289999988466302457530468754650246688887887739846899976410467--------997785 Q gi|254780952|r 409 DRQEIRDALAYFRLVCQEHRDEDFKRIINCPKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQ--------FRPQIR 480 (685) Q Consensus 409 ~~~eV~~lla~Lr~i~~p~d~~a~~~il~~p~~gi~~~~l~~l~~~a~~~~~~~~~~~~~~~~~~~--------~~~~~~ 480 (685) T Consensus 640 q~~Ev~~ml~~L~vIDNP~QDIPLvaVLRSPIvgf~E~ELa~iRl~~~-k~~~~Y~a~~~y~~~~~~~~~qkt~~~~~L~ 718 (1295) T TIGR02785 640 QTTEVRVMLSLLRVIDNPYQDIPLVAVLRSPIVGFDEEELALIRLQNA-KDSSFYEAVKSYVKAEKLASSQKTLIEDELY 718 (1295) T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCC-CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH T ss_conf 889999999873121685402788998734467888888999843166-6640799999996027888433552044899 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHH Q ss_conf 4334343335666531024660222333477709667885068845589888439999999830268-----89999975 Q gi|254780952|r 481 QSLQNFVKDIRRWNNCSKKMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSIIEKHET-----LEGFVLQA 555 (685) Q Consensus 481 ~~l~~~~~~l~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~~~~~~s-----l~~fl~~~ 555 (685) T Consensus 719 ~K~~~F~~~L~~wR~~a~~~~~~~LIW~iY~~t~y~dYVGGL---P~GkqRQANL~aLy~RA~~YE~tsFkGLFqF~RFI 795 (1295) T TIGR02785 719 EKLKRFLDSLQKWREFARTHSISELIWKIYEDTGYLDYVGGL---PNGKQRQANLYALYERARQYEKTSFKGLFQFIRFI 795 (1295) T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCC---CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH T ss_conf 999999999999999874278578999998532510001268---88466788899999999998512574067889999 Q ss_pred HHH----HHHH---HCCCCCCCEEEEEECCCCCCCCCEEEECCCCC---------------------------------C Q ss_conf 765----4221---11545893699961134556698369846857---------------------------------6 Q gi|254780952|r 556 PLR----ENLG---SFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQ---------------------------------G 595 (685) Q Consensus 556 ~~~----~~~~---~~~~~~d~V~i~TIH~SKGLEfd~V~i~gl~~---------------------------------g 595 (685) T Consensus 796 ~r~~e~~~Dla~a~~~~e~~naVR~MTIH~SKGLEFPvVFv~gl~k~FN~~DL~~~~ll~~~~G~G~~y~dkmetGaveD 875 (1295) T TIGR02785 796 ERMQERQKDLAEAVAVGEAENAVRLMTIHKSKGLEFPVVFVLGLGKQFNKQDLNESYLLNRQLGLGIKYIDKMETGAVED 875 (1295) T ss_pred HHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC T ss_conf 99830230115642468876726510020766543667897158823301112014111345675178887641265135 Q ss_pred CCCCHHCC--------------CHHHHHHHHHHHHHHHHHHHHEEEEEECC Q ss_conf 68422129--------------96787899999999985864116998313 Q gi|254780952|r 596 LLPHQLSI--------------NEGNVEGERRLAYVGITRAKKKCHLFYTI 632 (685) Q Consensus 596 ~~P~~~~~--------------~~~~~eEErRL~YVA~TRAk~~L~l~~~~ 632 (685) T Consensus 876 hYP~~~r~~ypsL~~~a~k~~~~~~llsEEMRvLYVALTRAk~KLiLVG~~ 926 (1295) T TIGR02785 876 HYPPEERLSYPSLPKVAIKQKMKRELLSEEMRVLYVALTRAKEKLILVGSV 926 (1295) T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 788643213576899999999999878888899999988888654355203

HHsearch alignment for GI: 254780952 and conserved domain: TIGR02785