HHsearch alignment for GI: 254780952 and conserved domain: TIGR02880
>TIGR02880 cbbX_cfxQ CbbX protein; InterPro: IPR000470 Proteins in this family are now designated CbbX. Some previously were CfxQ (carbon fixation Q). Its gene is often found immmediately downstream of the Rubisco large and small chain genes, and it is suggested to be necessary for Rubisco expression. CbbX has been shown to be necessary for photoautotrophic growth. The Cfx genes in Alcaligenes eutrophus encode a number of Calvin cycle enzymes . The observed sizes of two of the gene products, CfxX and CfxY, are 35 kDa and 27 kDa respectively . No functions could be assigned to CfxX and CfxY. These proteins show a high degree of similarity to the Bacillus subtilis stage V sporulation protein K . ; GO: 0005524 ATP binding.
Probab=90.85 E-value=0.47 Score=26.01 Aligned_cols=41 Identities=24% Similarity=0.388 Sum_probs=27.5
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC-CCHHHEEEEE
Q ss_conf 89896699958898835899999999998089-9978867621
Q gi|254780952|r 41 PDDTPLLILAGAGTGKTTVLIARMLHLICHKE-IPPSKILAMT 82 (685)
Q Consensus 41 ~~~~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~-~~p~~Il~iT 82 (685)
T Consensus 56 ~P~lhm~ftG~PGtGkttva-~~m~~~l~~lGy~r~G~~~~~t 97 (284)
T TIGR02880 56 APSLHMSFTGNPGTGKTTVA-LRMAQILHRLGYVRKGHLVSVT 97 (284)
T ss_pred CCCEEEEECCCCCCCHHHHH-HHHHHHHHHCCCCCCCCEEEEE
T ss_conf 88326775168987248999-9999999871540036267853