HHsearch alignment for GI: 254780952 and conserved domain: TIGR02928

>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..

Probab=91.37  E-value=0.32  Score=27.14  Aligned_cols=50  Identities=24%  Similarity=0.393  Sum_probs=34.6

Q ss_pred             CCCCCCCCCCC--CHH---HHHHCCCHHHHHHHH-CCCCCCEEEEECCCCCHHHHH
Q ss_conf             12321136832--158---887629988999985-389896699958898835899
Q gi|254780952|r   11 SHILKGDFVPS--CVP---NYLKGLNAQQTHAVT-IPDDTPLLILAGAGTGKTTVL   60 (685)
Q Consensus        11 ~~~~~~~~~~~--~~~---~~l~~Ln~~Q~~av~-~~~~~~~lV~AgaGsGKT~~L   60 (685)
T Consensus         5 ~~~L~~dY~Pden~i~hRdeqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt   60 (383)
T TIGR02928         5 RDLLEPDYVPDENRIVHRDEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVT   60 (383)
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHH
T ss_conf             22377577027424668678999999998875067489872588788898788999