HHsearch alignment for GI: 254780952 and conserved domain: cd01129
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which contains an ATP binding site and a tetracysteine motif. This subgroup also includes PillB and HofB.
Probab=95.48 E-value=0.03 Score=34.14 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=26.8
Q ss_pred CCCHHHHHHHH---CCCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 29988999985---389896699958898835899999999
Q gi|254780952|r 29 GLNAQQTHAVT---IPDDTPLLILAGAGTGKTTVLIARMLH 66 (685)
Q Consensus 29 ~Ln~~Q~~av~---~~~~~~~lV~AgaGsGKT~~L~~ri~~ 66 (685)
T Consensus 63 G~~~~~~~~l~~~~~~~~GlilitGptGSGKtTtl~a~l~~ 103 (264)
T cd01129 63 GLKPENLEIFRKLLEKPHGIILVTGPTGSGKTTTLYSALSE 103 (264)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 79999999999997089988999789999779999999986