HHsearch alignment for GI: 254780952 and conserved domain: cd01131
>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.
Probab=94.00 E-value=0.05 Score=32.69 Aligned_cols=24 Identities=29% Similarity=0.398 Sum_probs=18.7
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 966999588988358999999999
Q gi|254780952|r 44 TPLLILAGAGTGKTTVLIARMLHL 67 (685)
Q Consensus 44 ~~~lV~AgaGsGKT~~L~~ri~~L 67 (685)
T Consensus 2 GliLitG~TGSGKTTtl~all~~i 25 (198)
T cd01131 2 GLVLVTGPTGSGKSTTLAAMIDYI 25 (198)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 389998999997999999999853