HHsearch alignment for GI: 254780952 and conserved domain: pfam02689

>pfam02689 Herpes_Helicase Helicase. This family consists of Helicases from the Herpes viruses. Helicases are responsible for the unwinding of DNA and are essential for replication and completion of the viral life cycle.

Probab=90.82  E-value=0.42  Score=26.33  Aligned_cols=59  Identities=25%  Similarity=0.235  Sum_probs=37.1

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEH-HHHHHH
Q ss_conf             66999588988358999999999980899978867621147999999999998516458789617-899999
Q gi|254780952|r   45 PLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGEKIPRIQTF-HSFCAS  115 (685)
Q Consensus        45 ~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~~~~~~i~T~-Hsf~~~  115 (685)
T Consensus        62 ~ylITGtAGaGKSTsIq~L~~~L---------dCvITGaT~VAAQNls~~L~~~---~S~~~~TIf~~FGFk  121 (801)
T pfam02689        62 AYLITGTAGAGKSTSIQTLNENL---------DCLITGATRVAAQNLSAKLSRA---YSAYCPTIFQAFGFK  121 (801)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHC---------CEEEECCHHHHHHHHHHHHHHC---CCCCCCCHHHHHCCC
T ss_conf             89995378887051899999753---------9289561589988999986213---567686266652877