HHsearch alignment for GI: 254780952 and conserved domain: pfam05970
>pfam05970 DUF889 PIF1 helicase. The PIF1 helicase inhibits telomerase activity and is cell cycle regulated.
Probab=96.51 E-value=0.0013 Score=43.46 Aligned_cols=48 Identities=25% Similarity=0.187 Sum_probs=32.2
Q ss_pred ECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
Q ss_conf 5889883589999999999808999788676211479999999999985164587896178999
Q gi|254780952|r 50 AGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGEKIPRIQTFHSFC 113 (685)
Q Consensus 50 AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~~~~~~i~T~Hsf~ 113 (685)
T Consensus 1 G~AGTGKS~ll~~i~~~l-~~~~---~~v~vtA~TGiAA~~i~-------g-----G~TiHs~~ 48 (418)
T pfam05970 1 GYGGTGKTFLWNALSARI-RSRG---KIVLNVASSGIAALLLP-------G-----GRTAHSRF 48 (418)
T ss_pred CCCCCCHHHHHHHHHHHH-HHCC---CEEEEECCHHHHHHCCC-------C-----CEEHHHCC
T ss_conf 979887999999999999-7689---88999896899985169-------9-----87398526