HHsearch alignment for GI: 254780952 and conserved domain: smart00487

Probab=97.50  E-value=0.00039  Score=47.12  Aligned_cols=73  Identities=16%  Similarity=0.173  Sum_probs=55.4

Q ss_pred             HCCCHHHHHHHHCCCC--CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHHHHHHCCCC
Q ss_conf             6299889999853898--96699958898835899999999998089997886762114799999999999851645
Q gi|254780952|r   28 KGLNAQQTHAVTIPDD--TPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQAIQEMKNRLACYLGEK  102 (685)
Q Consensus        28 ~~Ln~~Q~~av~~~~~--~~~lV~AgaGsGKT~~L~~ri~~Ll~~~~~~p~~Il~iTFT~~AA~el~~Ri~~~l~~~  102 (685)
T Consensus         7 ~~~~~~Q~~~~~~~~~~~~~~~i~~~tGsGKT~~~~~~~~~~~~~~--~~~~~li~~P~~~l~~q~~~~~~~~~~~~   81 (201)
T smart00487        7 EPLRPYQKEAIEALLSGLRDVILAAPTGSGKTLAALLPALEALKRG--KGKRVLVLVPTRELAEQWAEELKKLGPSL   81 (201)
T ss_pred             CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC--CCCEEEEEECCHHHHHHHHHHHHHCCCCC
T ss_conf             9999889999999983899889989999609999999999986338--99759999085999999998860102102