RPSBLAST alignment for GI: 254780952 and conserved domain: TIGR01075

>gnl|CDD|130147 TIGR01075, uvrD, DNA helicase II. Designed to identify uvrD members of the uvrD/rep subfamily. Length = 715
 Score =  445 bits (1145), Expect = e-125
 Identities = 238/649 (36%), Positives = 353/649 (54%), Gaps = 37/649 (5%)

Query: 27  LKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQ 86
           L GLN +Q  AV  P    LL+LAGAG+GKT VL  R+  L+  +   P  I+A+TFTN+
Sbjct: 2   LDGLNDKQREAVAAPPGN-LLVLAGAGSGKTRVLTHRIAWLLSVENASPHSIMAVTFTNK 60

Query: 87  AIQEMKNRLACYLGEKIPR------IQTFHSFCASILRKHGEVVGLPTDFAILDSAESRT 140
           A  EM++R+    G  +        I TFH     +LR H    GLP DF ILDS +   
Sbjct: 61  AAAEMRHRI----GALLGTSARGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSDDQLR 116

Query: 141 IIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTEDAEIPKAIYIQYVAY 200
           ++K+L+K L +D+K + P + +  I+  ++ G  P  I       +    K IY  Y   
Sbjct: 117 LLKRLIKALNLDEKQWPPRQAMWYINNQKDEGLRPSHIQAFDNPVERTWIK-IYQAYQEA 175

Query: 201 LQKTKSCDFGGLIIKTIEVL-HHPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKE 259
             +    DF  L+++  E+L + PH+L+ Y E+  +I+VDE+QD N  QY  +RLL    
Sbjct: 176 CDRAGLVDFAELLLRAHELLRNKPHILQHYQERFTHILVDEFQDTNKIQYAWIRLLAGNT 235

Query: 260 DSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANK 319
                  +  VGD++Q IY WRGAQ  +I  F KDF  A  I+LEQNYRST +IL  AN 
Sbjct: 236 -----GNVMIVGDDDQSIYGWRGAQVENIQKFLKDFPGAETIRLEQNYRSTANILAAANA 290

Query: 320 LISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAIL 379
           LI++N +R  K L+T  D      +S++ + ++  E   ++  I   Q  G +L+  A+L
Sbjct: 291 LIANNDERLGKNLWT--DGEVGEPISLYSAFNELDEARFVVSRIKTWQRNGGALDECAVL 348

Query: 380 VRTSWQTRKFEDAFLEQEIPHKVIGG-SFYDRQEIRDALAYFRLVCQEHRDEDFKRIINC 438
            R++ Q+R  E+A L+  IP+++ GG  F++RQEI+DALAY RL+   + D  F+R+IN 
Sbjct: 349 YRSNAQSRVLEEALLQASIPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVINT 408

Query: 439 PKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSK 498
           P RGIG  +L  ++  A    ++L QA+ +L        +   +LQ FV+ I    N + 
Sbjct: 409 PTRGIGDRTLDVVRQAARDRGLTLWQAARELTQEKVLAGRAASALQRFVELIEALANETA 468

Query: 499 KMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSI---------IEKHETLE 549
            M      + +++ SG   M++  K  EK Q R++NL EL++           E    L 
Sbjct: 469 DMPLHVQTDHVIKDSGLREMYQQEK-GEKGQARIENLEELVTATRQFSLPENDEDMTPLT 527

Query: 550 GFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINE-GNV 608
            F+  A L    G      + +Q+MTLH+AKGLEF  VF+ G E+G+ P Q+S++E G +
Sbjct: 528 AFLSHAALEAGEGQADAGQDAVQLMTLHSAKGLEFPLVFLVGMEEGMFPSQMSLDEGGRL 587

Query: 609 EGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLEL 657
           E ERRLAYVGITRA +K  + Y   RR +             S+F+ EL
Sbjct: 588 EEERRLAYVGITRAMQKLTITYAETRRLYGKEVYHI-----PSRFIREL 631