RPSBLAST alignment for GI: 254780952 and conserved domain: TIGR01075
>gnl|CDD|130147 TIGR01075, uvrD, DNA helicase II. Designed to identify uvrD members of the uvrD/rep subfamily. Length = 715
Score = 445 bits (1145), Expect = e-125
Identities = 238/649 (36%), Positives = 353/649 (54%), Gaps = 37/649 (5%)
Query: 27 LKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTNQ 86
L GLN +Q AV P LL+LAGAG+GKT VL R+ L+ + P I+A+TFTN+
Sbjct: 2 LDGLNDKQREAVAAPPGN-LLVLAGAGSGKTRVLTHRIAWLLSVENASPHSIMAVTFTNK 60
Query: 87 AIQEMKNRLACYLGEKIPR------IQTFHSFCASILRKHGEVVGLPTDFAILDSAESRT 140
A EM++R+ G + I TFH +LR H GLP DF ILDS +
Sbjct: 61 AAAEMRHRI----GALLGTSARGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSDDQLR 116
Query: 141 IIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTEDAEIPKAIYIQYVAY 200
++K+L+K L +D+K + P + + I+ ++ G P I + K IY Y
Sbjct: 117 LLKRLIKALNLDEKQWPPRQAMWYINNQKDEGLRPSHIQAFDNPVERTWIK-IYQAYQEA 175
Query: 201 LQKTKSCDFGGLIIKTIEVL-HHPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKE 259
+ DF L+++ E+L + PH+L+ Y E+ +I+VDE+QD N QY +RLL
Sbjct: 176 CDRAGLVDFAELLLRAHELLRNKPHILQHYQERFTHILVDEFQDTNKIQYAWIRLLAGNT 235
Query: 260 DSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANK 319
+ VGD++Q IY WRGAQ +I F KDF A I+LEQNYRST +IL AN
Sbjct: 236 -----GNVMIVGDDDQSIYGWRGAQVENIQKFLKDFPGAETIRLEQNYRSTANILAAANA 290
Query: 320 LISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAIL 379
LI++N +R K L+T D +S++ + ++ E ++ I Q G +L+ A+L
Sbjct: 291 LIANNDERLGKNLWT--DGEVGEPISLYSAFNELDEARFVVSRIKTWQRNGGALDECAVL 348
Query: 380 VRTSWQTRKFEDAFLEQEIPHKVIGG-SFYDRQEIRDALAYFRLVCQEHRDEDFKRIINC 438
R++ Q+R E+A L+ IP+++ GG F++RQEI+DALAY RL+ + D F+R+IN
Sbjct: 349 YRSNAQSRVLEEALLQASIPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVINT 408
Query: 439 PKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSK 498
P RGIG +L ++ A ++L QA+ +L + +LQ FV+ I N +
Sbjct: 409 PTRGIGDRTLDVVRQAARDRGLTLWQAARELTQEKVLAGRAASALQRFVELIEALANETA 468
Query: 499 KMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSI---------IEKHETLE 549
M + +++ SG M++ K EK Q R++NL EL++ E L
Sbjct: 469 DMPLHVQTDHVIKDSGLREMYQQEK-GEKGQARIENLEELVTATRQFSLPENDEDMTPLT 527
Query: 550 GFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINE-GNV 608
F+ A L G + +Q+MTLH+AKGLEF VF+ G E+G+ P Q+S++E G +
Sbjct: 528 AFLSHAALEAGEGQADAGQDAVQLMTLHSAKGLEFPLVFLVGMEEGMFPSQMSLDEGGRL 587
Query: 609 EGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLEL 657
E ERRLAYVGITRA +K + Y RR + S+F+ EL
Sbjct: 588 EEERRLAYVGITRAMQKLTITYAETRRLYGKEVYHI-----PSRFIREL 631