RPSBLAST alignment for GI: 254780952 and conserved domain: KOG2108
>gnl|CDD|37319 KOG2108, KOG2108, KOG2108, 3'-5' DNA helicase [Replication, recombination and repair]. Length = 853
Score = 143 bits (363), Expect = 1e-34
Identities = 147/643 (22%), Positives = 229/643 (35%), Gaps = 70/643 (10%)
Query: 26 YLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMTFTN 85
LN Q + P ++AG G+GKT VL R+ +LI I P +IL T TN
Sbjct: 10 LYSLLNKSQRFSALSPLRR-KRVIAGPGSGKTLVLTERVAYLINFNNIKPDEILINTGTN 68
Query: 86 QAIQEMKNRLACYLG-----EKIPRIQTFHSFCASILRKHGEVVGLPTDFAILDSAESRT 140
+A +K L L ++I I TFHS + G ++ L + I D ++
Sbjct: 69 KAADSIKLNLIAILRTSKCSKEI--IGTFHSIAVKYSLRDGPLLPLSENCRIQDLPDTYA 126
Query: 141 IIKQLLKDL--QIDD---------KDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTEDAEI 189
I+ + L +I + P + N I L E
Sbjct: 127 ILGDNIWALLAKIKLPSSSSNRKQRLLFPLRRPDSTVTKPNVTETLYSIAVLLLAMFEEG 186
Query: 190 PK-----AIYIQYVAYLQKTKSCDFGGLIIKTIEVLHHPHVLKKYHEKIPYIMVDEYQDI 244
I Y YLQ + D L + +++VL P V KI +++VDE+QDI
Sbjct: 187 INVSNRDDYEIYYYLYLQTLE--DSCTLAMNSLKVLQRPRVCSN---KITHVLVDEFQDI 241
Query: 245 NTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDAN---II 301
Q L++L + GD +Q IY++ G + I F
Sbjct: 242 LKIQLEPLQVL-------KIKAFAGTGDTDQSIYKFAGKW-AEIRILYVTFNKFIATQAE 293
Query: 302 KLEQNYRSTTHILNTANKLISHNKQRFDKK-LFTQRDCHDDAKVSIHVSQSDNSELSTII 360
+L N RS I + A I Q K L + + + +
Sbjct: 294 RLFPNNRSCKTIHSLAYGAIGRQYQEKKKLLLRKLTPS--ELNSVLAEFKGGFPKAKLKC 351
Query: 361 QEIINIQNTGMSL---NNIAILVRTSWQTRKFEDAFLEQEIPHKVIGG-SFYDRQEIRDA 416
+ N N+ AIL +S Q FE +EQ +K+I SF D E R
Sbjct: 352 RTEENFLVAADIEFTINDHAILWCSSSQLSSFESVLVEQREKYKLIAVASFLDSNERRLG 411
Query: 417 LAYFRLVCQEHRDEDFKRIINCPKRGIGKESLHKIQYHASQ------HHISLLQASEKLI 470
L Y +L D K ++ P+R G I +Q ++ L+Q +
Sbjct: 412 LNYEKLHANMTPDGYLK-LLQLPERPNGLAKFDYIILDEAQDCTPCIQNLILIQKHNIKV 470
Query: 471 DSGQFRPQIRQSLQNFVKDIRRWNNCSKKMDPAPIANMILEQSGYMAMWKNNKSSEKSQE 530
G F I R N+ + P + + + K E E
Sbjct: 471 FVGDFHQSI--------YSFRGANSALFNLATLPDTLVECLTKSFRFGNEVAKVKETILE 522
Query: 531 RLDNLRELLSIIEKHETLEGFVLQAPLRENLGSFIPDSNC-----IQIMTLHAAKGLEFD 585
+ +R+L + H ++ L S + +QI TLH+AKGLE+
Sbjct: 523 KKKRVRKLTLVSNNHFYFLSIPGDVSGQKFLLSRTLSNLTQEEEELQISTLHSAKGLEWP 582
Query: 586 TVFISGWEQGLLPHQLSINEGNVEGERRLAYVGITRAKKKCHL 628
V I + ++P + + + V TRA++ HL
Sbjct: 583 VVSIGLCRENIIPILFQ---DEEDEDGQNLVVKDTRARRLLHL 622