HHsearch alignment of GI: 254780953 and MMDB domain: 2k1s_A_
>2k1s_A (A:) Inner membrane lipoprotein YIAD; abbababab, OMPA, alpha beta, palmitate, transmembrane, structural genomics, PSI-2; NMR {Escherichia coli K12}
Probab=100.00 E-value=5.5e-34 Score=209.19 Aligned_cols=142 Identities=33% Similarity=0.494 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH
Q ss_conf 37888999999720178358860875899852211128-81310999999999999999858994899998037787200
Q gi|254780953|r 46 SLDKAEDEFQMQLQDTGIVVSRIGDMITCYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLK 124 (190)
Q Consensus 46 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g~~~ 124 (190)
+++.+...+...+..+++.+...++...+.++..++|+ +++.|++++++.|+.++.+|+.+|+..|.|+||||..|++.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~v~~~~~~~~i~~~~~v~F~~~s~~l~~~~~~~L~~ia~~L~~~p~~~i~I~Ghtd~~g~~~ 81 (149)
T 2k1s_A 2 YMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHD 81 (149)
T ss_dssp CSHHHHHHHHHHTTTTSCEEEEETTEEEEEEEHHHHBSSSSSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEECCCTTCHH
T ss_pred CHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
T ss_conf 78899999999871599779997999999847860665997336989999999887777318875201022413544543
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCHHH
Q ss_conf 1112258999999998885238745169999703458889976977985299169999301011
Q gi|254780953|r 125 NNLLISQERADVIKSYLIQRGVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGNI 188 (190)
Q Consensus 125 ~N~~LS~~RA~~V~~~L~~~g~~~~r~i~v~g~G~~~p~~~n~~~~~ra~NRRVei~i~~~~~~ 188 (190)
+||.||.+||.+|++||...|+++.| |.+.|||+.+|+++|+++++|++||||||+|.++...
T Consensus 82 ~N~~LS~~RA~aV~~~l~~~gv~~~r-i~~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~~~~ 144 (149)
T 2k1s_A 82 LNMRLSQQRADSVASALITQGVDASR-IRTQGLGPANPIASNSTAEGKAQNRRVEITLSPLLEH 144 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGG-EEEEECTTTCCSSCSSSHHHHHHHSEEEEEEEECSSC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCC-CEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEECCHH
T ss_conf 32017889999999999981997663-3589965657668993977897449699999615140