HHsearch alignment of GI: 254780953 and MMDB domain: 2zov_A_

>2zov_A (A:) Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell projection, flagellar rotation, inner membrane, membrane; 2.00A {Salmonella typhimurium}
Probab=99.96  E-value=2.6e-29  Score=183.09  Aligned_cols=122  Identities=19%  Similarity=0.243  Sum_probs=102.2

Q ss_pred             CCEEEEECCEEEE---EECCCEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC-----CCHHHHHHHHHH
Q ss_conf             8358860875899---852211128-8131099999999999999985899489999803778-----720011122589
Q gi|254780953|r   62 GIVVSRIGDMITC---YIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSI-----GTLKNNLLISQE  132 (190)
Q Consensus        62 ~~~~~~~~~~~~~---~~~~~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~-----g~~~~N~~LS~~  132 (190)
                      ...+........+   .++..++|. +++.|+++++..|+.|+.+|+.+|. .|.|+||||+.     |++.|||.||++
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~i~F~~~sa~l~~~~~~~l~~ia~~l~~~~~-~i~I~GhtD~~~~~~~G~~~~N~~LS~~  130 (210)
T 2zov_A           52 HLKIDLVQEGLRIQIIDSQNRPXFKTGSAEVEPYXRDILRAIAPVLNGIPN-RISLAGHTDDFPYANGEKGYSNWELSAD  130 (210)
T ss_dssp             GEEEEEETTEEEEEEECCSSSCSBCTTSCCBCHHHHHHHHHHHHHHTTSCC-CEEEEEEEECSCCCSSCSSCCHHHHHHH
T ss_pred             CCEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf             715998179529999848998486999744698799999999999983386-6999985487764457764205789999


Q ss_pred             HHHHHHHHHHHH-CCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCHH
Q ss_conf             999999988852-3874516999970345888997697798529916999930101
Q gi|254780953|r  133 RADVIKSYLIQR-GVSSNRFISVRGFAYKYPIDTNDTKVGRQNNQRIEIQIFPRGN  187 (190)
Q Consensus       133 RA~~V~~~L~~~-g~~~~r~i~v~g~G~~~p~~~n~~~~~ra~NRRVei~i~~~~~  187 (190)
                      ||.+|+.||+.. |+.+.| |.+.|||+.+|+++|+  ++|++||||||+|++...
T Consensus       131 RA~aV~~~L~~~~gi~~~r-i~~~g~G~~~p~~~n~--~~~~~NRRVeI~i~~~~~  183 (210)
T 2zov_A          131 RANASRRELVAGGLDNGKV-LRVVGXAATXRLSDRG--PDDAINRRISLLVLNKQA  183 (210)
T ss_dssp             HHHHHHHHHHHTTCCTTCE-EEEEEECCC-----------CCCEEEEEEEEECHHH
T ss_pred             HHHHHHHHHHHCCCCCCCE-EEEEEECCCCCCCCCC--CCHHHCCCEEEEEECCHH
T ss_conf             9999999999859980358-9999868887899899--645872988999978477