HHsearch results for GI: 254780953 and protein with PDBid: 1r1m_A
>1r1m_A Outer membrane protein class 4; 1.90A {Neisseria meningitidis} SCOP: d.79.7.1
Probab=99.97 E-value=7.2e-31 Score=190.90 Aligned_cols=111 Identities=23% Similarity=0.292 Sum_probs=103.0
Q ss_pred EEECCCEECC-CHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 9852211128-813109999999999999998589948999980377872001112258999999998885238745169
Q gi|254780953|r 74 CYIPVHVSFV-SEVFLEKKFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNRFI 152 (190)
Q Consensus 74 ~~~~~~~~f~-~~a~l~~~~~~~L~~ia~~l~~~~~~~i~I~GHTD~~g~~~~N~~LS~~RA~~V~~~L~~~g~~~~r~i 152 (190)
+.++..++|+ +++.|+++++..|+.|+.+|+.+|...|.|+||||+.|+.+|||.||++||++|++||+..|+.+.| |
T Consensus 11 i~l~~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~~~~~I~I~GhtD~~G~~~~N~~LS~~RA~aV~~~L~~~Gi~~~r-i 89 (164)
T 1r1m_A 11 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSR-I 89 (164)
T ss_dssp EEEEHHHHHTTSSSCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGG-E
T ss_pred EEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH-E
T ss_conf 997773357289743698999999999999977898189999981898985562699999999999999985999899-8
Q ss_pred EEEEECCCCCCCCCCCHHHHHC--------------------CCCEEEEEECC
Q ss_conf 9997034588899769779852--------------------99169999301
Q gi|254780953|r 153 SVRGFAYKYPIDTNDTKVGRQN--------------------NQRIEIQIFPR 185 (190)
Q Consensus 153 ~v~g~G~~~p~~~n~~~~~ra~--------------------NRRVei~i~~~ 185 (190)
.+.|||+++|+++|.++.++++ ||||||.|.+-
T Consensus 90 ~~~g~Ge~~P~~~n~t~~~~a~~~~~~~~~~~r~~~i~~~~~NRRVEi~v~~~ 142 (164)
T 1r1m_A 90 SAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSI 142 (164)
T ss_dssp EEEECTTTTCCCHHHHHHHHHTCCSSCCSSHHHHHHHHHTGGGSEEEEEEEEE
T ss_pred EEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 99997676888989797887421441000000466653037889889999614