HHsearch alignment for GI: 254780954 and conserved domain: COG4093

Probab=94.33  E-value=0.3  Score=25.13  Aligned_cols=99  Identities=21%  Similarity=0.271  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHHCCEEEEECCEEEEECCC-EEEEEEEEEEECCCCCCC
Q ss_conf             889999999999999999988552085887899999999--98298199962148997363-179994279826899876
Q gi|254780954|r    3 RRVLIGLGFLFSVVLVGAFTVPLFIDWTDFREDFERQAT--LIVGKKIAVKGGIKIHILPF-PSVFFKDIRIDQKEDGSF   79 (380)
Q Consensus         3 k~ll~~~~~~lvl~~~~~~~~~~~~d~~~~k~~i~~~~s--~~~g~~v~i~G~i~~~l~P~-p~i~~~~v~i~~~~~~~~   79 (380)
T Consensus        14 kr~~wl~i--~ivv~~g~ySaGWFylA~rle~~~~a~~a~l~a~Gv~~~c-~~l~~~GyPfRi~v~cd~v~~~d~~~G~-   89 (338)
T COG4093          14 KRLFWLVI--AIVVLIGAYSAGWFYLADRLEQQADAQAADLQARGVSGEC-ANLTFSGYPFRINVFCDKVRVDDPTEGW-   89 (338)
T ss_pred             CCHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE-ECEEECCCCEEEEEEECCEEECCCCCCH-
T ss_conf             22348999--9999887750107667769999998764213103035525-1107505653898785124733786551-


Q ss_pred             EEEEEEEEEEEEHHHHHCCCCCCCEEEEECC
Q ss_conf             0678679999870265249710113899644
Q gi|254780954|r   80 ESKIEGLSMRAEFLPLLSGEIRVFDMYIDQP  110 (380)
Q Consensus        80 ~~~~~~~~v~i~l~~Ll~~~~~i~~i~L~~p  110 (380)
T Consensus        90 aas~g~l~s~AqvY~p~~~-----V~~L~gp  115 (338)
T COG4093          90 AASAGQLRSAAQVYNPGHW-----VLELDGP  115 (338)
T ss_pred             HHCCCCCCCCCCCCCCCCE-----EEECCCC
T ss_conf             1105433454300157725-----7744786