RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780954|ref|YP_003065367.1| hypothetical protein CLIBASIA_04265 [Candidatus Liberibacter asiaticus str. psy62] (380 letters) >d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]} Length = 170 Score = 26.8 bits (59), Expect = 3.0 Identities = 8/43 (18%), Positives = 15/43 (34%) Query: 11 FLFSVVLVGAFTVPLFIDWTDFREDFERQATLIVGKKIAVKGG 53 F F + G + + + W+ + V K + V G Sbjct: 119 FDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGS 161 >d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} Length = 374 Score = 26.3 bits (57), Expect = 4.2 Identities = 8/24 (33%), Positives = 13/24 (54%) Query: 131 MDMIHNVILEKIHVKGGRIKIIDQ 154 M H+ LE I G ++++DQ Sbjct: 1 MSKPHHATLESIKYTPGSLRLLDQ 24 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.318 0.137 0.387 Gapped Lambda K H 0.267 0.0635 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 1,383,025 Number of extensions: 66420 Number of successful extensions: 145 Number of sequences better than 10.0: 1 Number of HSP's gapped: 145 Number of HSP's successfully gapped: 6 Length of query: 380 Length of database: 2,407,596 Length adjustment: 87 Effective length of query: 293 Effective length of database: 1,213,086 Effective search space: 355434198 Effective search space used: 355434198 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 54 (24.8 bits)