HHsearch alignment for GI: 254780955 and conserved domain: COG3814

>COG3814 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00  E-value=0  Score=414.08  Aligned_cols=157  Identities=62%  Similarity=1.009  Sum_probs=134.0

Q ss_pred             CHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEEEECCEEECCC
Q ss_conf             02210498999999999999999999997089998746999984588887759899963975379984311218076454
Q gi|254780955|r   25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDN  104 (204)
Q Consensus        25 M~~Dli~Y~~l~~~Alr~Vvr~~L~~v~~~g~LpG~hHfyItF~T~~~gV~ip~~L~~~yP~emTIVlQhqf~dL~V~~~  104 (204)
T Consensus         1 m~qd~i~Y~~laqealrgvvkkvL~kva~~g-Lp~dhh~yItf~T~apgV~~~s~lk~kYPeqmTIVlQ~Qfwdl~v~dt   79 (157)
T COG3814           1 MGQDHIRYDILAQEALRGVVKKVLAKVAATG-LPGDHHFYITFLTGAPGVRIPSKLKQKYPEQMTIVLQHQFWDLKVTDT   79 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCEEEEEEECCCCCEECCHHHHHHCCCCEEEEEEEEEECCEECCC
T ss_conf             9522478999999999999999999875328-998737999996389823444888763850359976545401210246


Q ss_pred             EEEEEEEECCEEEEEEEEHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             79999984987668998442420230677530356034676654334445654444456556643344444445556655
Q gi|254780955|r  105 HFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKST  184 (204)
Q Consensus       105 ~FsV~LsF~g~~e~L~IPf~AIt~F~DPSV~FgLqF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (204)
T Consensus        80 gFsv~lsF~~vpe~l~iPf~Al~~FyDpsvnf~LeF~~~~~~~e~~e~-------~~~p~~---------------~~~~  137 (157)
T COG3814          80 GFSVTLSFSGVPEKLYIPFDALRGFYDPSVNFELEFDVSLNIEEEAEP-------EAEPSN---------------KAKS  137 (157)
T ss_pred             CEEEEEEECCCCEEEEEEHHHHHHHCCCCCCEEEEECCCCCCCCCCCC-------CCCCCC---------------CCCC
T ss_conf             248998857963079962588550148876579997442255445676-------555444---------------2236


Q ss_pred             CCCCCCCCCCEEEEEECCCC
Q ss_conf             56665677728983100269
Q gi|254780955|r  185 KKQNKNKMASVISLDNFRKK  204 (204)
Q Consensus       185 ~~~~~~~~aeVVSLD~FRKK  204 (204)
T Consensus       138 ~at~~~~~p~VvsLD~FRkk  157 (157)
T COG3814         138 GATSDSEGPNVVSLDAFRKK  157 (157)
T ss_pred             CCCCCCCCCCEEEHHHHHCC
T ss_conf             66577889848873774049