HHsearch alignment for GI: 254780955 and conserved domain: COG3814
>COG3814 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00 E-value=0 Score=414.08 Aligned_cols=157 Identities=62% Similarity=1.009 Sum_probs=134.0
Q ss_pred CHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEEEECCEEECCC
Q ss_conf 02210498999999999999999999997089998746999984588887759899963975379984311218076454
Q gi|254780955|r 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDN 104 (204)
Q Consensus 25 M~~Dli~Y~~l~~~Alr~Vvr~~L~~v~~~g~LpG~hHfyItF~T~~~gV~ip~~L~~~yP~emTIVlQhqf~dL~V~~~ 104 (204)
T Consensus 1 m~qd~i~Y~~laqealrgvvkkvL~kva~~g-Lp~dhh~yItf~T~apgV~~~s~lk~kYPeqmTIVlQ~Qfwdl~v~dt 79 (157)
T COG3814 1 MGQDHIRYDILAQEALRGVVKKVLAKVAATG-LPGDHHFYITFLTGAPGVRIPSKLKQKYPEQMTIVLQHQFWDLKVTDT 79 (157)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCEEEEEEECCCCCEECCHHHHHHCCCCEEEEEEEEEECCEECCC
T ss_conf 9522478999999999999999999875328-998737999996389823444888763850359976545401210246
Q ss_pred EEEEEEEECCEEEEEEEEHHHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999984987668998442420230677530356034676654334445654444456556643344444445556655
Q gi|254780955|r 105 HFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKST 184 (204)
Q Consensus 105 ~FsV~LsF~g~~e~L~IPf~AIt~F~DPSV~FgLqF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (204)
T Consensus 80 gFsv~lsF~~vpe~l~iPf~Al~~FyDpsvnf~LeF~~~~~~~e~~e~-------~~~p~~---------------~~~~ 137 (157)
T COG3814 80 GFSVTLSFSGVPEKLYIPFDALRGFYDPSVNFELEFDVSLNIEEEAEP-------EAEPSN---------------KAKS 137 (157)
T ss_pred CEEEEEEECCCCEEEEEEHHHHHHHCCCCCCEEEEECCCCCCCCCCCC-------CCCCCC---------------CCCC
T ss_conf 248998857963079962588550148876579997442255445676-------555444---------------2236
Q ss_pred CCCCCCCCCCEEEEEECCCC
Q ss_conf 56665677728983100269
Q gi|254780955|r 185 KKQNKNKMASVISLDNFRKK 204 (204)
Q Consensus 185 ~~~~~~~~aeVVSLD~FRKK 204 (204)
T Consensus 138 ~at~~~~~p~VvsLD~FRkk 157 (157)
T COG3814 138 GATSDSEGPNVVSLDAFRKK 157 (157)
T ss_pred CCCCCCCCCCEEEHHHHHCC
T ss_conf 66577889848873774049