HHSEARCH alignment of GI: 254780955 and SCOP domain: d1ou8a_

Alignment
>d1ou8a_ b.136.1.1 (A:) Stringent starvation protein B, SspB {Haemophilus influenzae [TaxId: 727]}
Probab=98.37  E-value=2e-06  Score=59.63  Aligned_cols=93  Identities=15%  Similarity=0.250  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEEEE-CCEEECCCEEEEEEEECCEEEEEEE
Q ss_conf             999999999970899987469999845888877598999639753799843112-1807645479999984987668998
Q gi|254780955|r   43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQF-WDLKVLDNHFEVGLSFSNVPERLVI  121 (204)
Q Consensus        43 Vvr~~L~~v~~~g~LpG~hHfyItF~T~~~gV~ip~~L~~~yP~emTIVlQhqf-~dL~V~~~~FsV~LsF~g~~e~L~I  121 (204)
                      ++|....=+..+|+     -=||--.+..+||.+|....+  -.+|+.-|-.+- .||.++++..+-...|||++..+.|
T Consensus         8 LiRA~y~W~~Dn~~-----TP~l~Vda~~~~v~VP~~~v~--dg~IvLNisp~Av~~L~i~nd~IsF~aRF~G~~~~i~v   80 (106)
T d1ou8a_           8 LLRAYYDWLVDNSF-----TPYLVVDATYLGVNVPVEYVK--DGQIVLNLSASATGNLQLTNDFIQFNARFKGVSRELYI   80 (106)
T ss_dssp             HHHHHHHHHHHTTC-----CEEEEEETTSTTCBCCGGGCB--TTEEEEECSTTTCEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHHHHHHCCC-----CCEEEEEECCCCCCCCHHHCC--CCEEEEECCHHHHCCEEEECCEEEEEEEECCCCEEEEE
T ss_conf             39999999987899-----876999958998848979906--98399986841110678817799999998990279998


Q ss_pred             EHHHHEEEECCCCCEEEEECC
Q ss_conf             442420230677530356034
Q gi|254780955|r  122 PFNAIKGFYDPSVNFELEFDV  142 (204)
Q Consensus       122 Pf~AIt~F~DPSV~FgLqF~~  142 (204)
                      |+.||.+-+....+-|+-|+.
T Consensus        81 P~~AV~aIyarEnGqGm~F~~  101 (106)
T d1ou8a_          81 PMGAALAIYARENGDGVMFEP  101 (106)
T ss_dssp             EGGGEEEEEETTTCCEEECCC
T ss_pred             EHHHHHHHEECCCCCCCCCCC
T ss_conf             789964050005588763087


SCOP domain information

class: All beta proteins
fold: SspB-like
superfamily: SspB-like
family: Stringent starvation protein B, SspB
domain: Stringent starvation protein B, SspB
species: Haemophilus influenzae [TaxId: 727]