BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780955|ref|YP_003065368.1| hypothetical protein
CLIBASIA_04270 [Candidatus Liberibacter asiaticus str. psy62]
(204 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780955|ref|YP_003065368.1| hypothetical protein CLIBASIA_04270 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040632|gb|ACT57428.1| hypothetical protein CLIBASIA_04270 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 204
Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats.
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE
Sbjct: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
Query: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV
Sbjct: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK
Sbjct: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
Query: 181 KKSTKKQNKNKMASVISLDNFRKK 204
KKSTKKQNKNKMASVISLDNFRKK
Sbjct: 181 KKSTKKQNKNKMASVISLDNFRKK 204
>gi|92118241|ref|YP_577970.1| hypothetical protein Nham_2731 [Nitrobacter hamburgensis X14]
gi|91801135|gb|ABE63510.1| protein of unknown function DUF1321 [Nitrobacter hamburgensis X14]
Length = 202
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 83/184 (45%), Positives = 115/184 (62%), Gaps = 3/184 (1%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+D M+ DHIRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV+IS L
Sbjct: 22 MDQPMSTDHIRYDLLARDALRGVLRRVLTDAAEQG-LPGEHHFFITFMSKADGVKISPRL 80
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+PE+MTI++Q+QFWDL V + FEVGLSF +PERLV+PFN+IK FYDPSV F L+F
Sbjct: 81 LAQHPEEMTIILQHQFWDLTVSEERFEVGLSFGGIPERLVVPFNSIKSFYDPSVQFGLQF 140
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
+ E G + + + ++ K ++ A V+ LD
Sbjct: 141 EPAET--ETAAADMPPGAPSPAVPSPAVLAVPDTPSPPAAAETEDKPKPSEGAEVVRLDR 198
Query: 201 FRKK 204
FRKK
Sbjct: 199 FRKK 202
>gi|163758988|ref|ZP_02166074.1| hypothetical protein HPDFL43_04470 [Hoeflea phototrophica DFL-43]
gi|162283392|gb|EDQ33677.1| hypothetical protein HPDFL43_04470 [Hoeflea phototrophica DFL-43]
Length = 204
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 95/193 (49%), Positives = 129/193 (66%), Gaps = 6/193 (3%)
Query: 18 IKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRIS 77
+ LM DHIRYDILA++ALRG+++ VLSEVA+ G LPG+HHF+ITF T A GVRIS
Sbjct: 11 VTGKKALMPQDHIRYDILAQDALRGVIRKVLSEVAATGYLPGDHHFFITFLTEAPGVRIS 70
Query: 78 QNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFE 137
L++ YPE+MTIV+Q+QFWDLK+ ++ FE+GLSFS+ PE+LV+PF+AI+GFYDPSVNFE
Sbjct: 71 TQLKERYPEQMTIVVQHQFWDLKISESQFEIGLSFSDKPEKLVVPFSAIRGFYDPSVNFE 130
Query: 138 LEFDVHIEH------IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
LEFD +E ++ E + + +D+ + +K
Sbjct: 131 LEFDTVLEDAANDGGDQDGDERNELASTIERLVEPSAKDDAATGEDAETGDEGEDGDKKP 190
Query: 192 MASVISLDNFRKK 204
A V+SLD+FRKK
Sbjct: 191 GADVVSLDSFRKK 203
>gi|158426109|ref|YP_001527401.1| hypothetical protein AZC_4485 [Azorhizobium caulinodans ORS 571]
gi|158332998|dbj|BAF90483.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 217
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 89/192 (46%), Positives = 122/192 (63%), Gaps = 14/192 (7%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
DHIRYD+LA+EALRG+V+ VLS+VA G LPG+HHFYI+F T A GVR+SQ +R+ YP
Sbjct: 27 PVDHIRYDLLAQEALRGVVRRVLSDVARDG-LPGDHHFYISFDTRAPGVRLSQRMREQYP 85
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E MTIV+Q+QFWDL V ++ EVGLSF VPE+L+IPF+A+KGF+DPSV F L+FD+
Sbjct: 86 EDMTIVLQHQFWDLNVTEHAVEVGLSFGGVPEKLLIPFSAMKGFFDPSVKFGLQFDLGTP 145
Query: 146 HIEEKLEGGNTGKV-------------LTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
E +L+G + ++P +V+ + + + +
Sbjct: 146 EEEPELDGVQDTEASAPVPLAGAKGSKASAPKLRGAASEPAVASAGGSDEKPEGEPSSGG 205
Query: 193 ASVISLDNFRKK 204
A V+ LD FRKK
Sbjct: 206 AEVVRLDVFRKK 217
>gi|75676537|ref|YP_318958.1| hypothetical protein Nwi_2352 [Nitrobacter winogradskyi Nb-255]
gi|74421407|gb|ABA05606.1| Protein of unknown function DUF1321 [Nitrobacter winogradskyi
Nb-255]
Length = 182
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 85/183 (46%), Positives = 114/183 (62%), Gaps = 4/183 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+L +A+RG+++ VL++ A G LPGEHHF+ITF + A GV IS L Y
Sbjct: 1 MPTDHIRYDLLTSDAMRGVLRRVLTDAAERG-LPGEHHFFITFKSKADGVTISPRLLTQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++HFEVGLSF VPERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLIVTEDHFEVGLSFGGVPERLVVPFSAIKSFFDPSVQFGLQFEPAE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK---KSTKKQNKNKMASVISLDNF 201
+ + + P +V D S+ +S K + A V+ LD F
Sbjct: 120 TGEAQAEKAETEETSTSEPSTAPSPTALAVPADPSQPAAAESENKPKPGQGAEVVRLDRF 179
Query: 202 RKK 204
RKK
Sbjct: 180 RKK 182
>gi|85714700|ref|ZP_01045687.1| hypothetical protein NB311A_20996 [Nitrobacter sp. Nb-311A]
gi|85698585|gb|EAQ36455.1| hypothetical protein NB311A_20996 [Nitrobacter sp. Nb-311A]
Length = 181
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 85/183 (46%), Positives = 115/183 (62%), Gaps = 5/183 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+L +A+RG+++ VL++ A G LPGEHHF+ITF + A GV IS L Y
Sbjct: 1 MPTDHIRYDLLTSDAMRGVLRRVLTDAAEHG-LPGEHHFFITFMSKADGVTISSRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++HFEVGLSF VPERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLTVTEDHFEVGLSFGGVPERLVVPFSAIKSFFDPSVQFGLQFEPA- 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK---KSTKKQNKNKMASVISLDNF 201
E + + E + P + D S+ ++ K + A V+ LD F
Sbjct: 119 ETEKAETEKAEIETNASEPSTAPSPTALAAPADHSQPTAAETEDKPKPGQGAEVVRLDRF 178
Query: 202 RKK 204
RKK
Sbjct: 179 RKK 181
>gi|39936561|ref|NP_948837.1| hypothetical protein RPA3499 [Rhodopseudomonas palustris CGA009]
gi|39650417|emb|CAE28940.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 178
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 120/180 (66%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSKGDGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E E E + +++T+ T+S + DSS + + A V+ LD FRKK
Sbjct: 120 EVD-ETGEADDGTELVTAAPAPVALPTSSATTDSSAPSDDEPPRSGEGAEVVRLDRFRKK 178
>gi|91977825|ref|YP_570484.1| hypothetical protein RPD_3359 [Rhodopseudomonas palustris BisB5]
gi|91684281|gb|ABE40583.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisB5]
Length = 194
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 82/182 (45%), Positives = 115/182 (63%), Gaps = 6/182 (3%)
Query: 23 TLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRK 82
M DHIRYD+LA+EALRG+++ VL++VA G LPGEHHF+ITF + A GVR+S L
Sbjct: 19 QFMATDHIRYDVLAREALRGVLRQVLTDVAQHG-LPGEHHFFITFLSKADGVRLSTRLLA 77
Query: 83 NYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
YPE+MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK F+DPSV F L+F+
Sbjct: 78 QYPEEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFSAIKSFFDPSVQFGLQFET 137
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ E + ++ + ++ K++ A V+ LD FR
Sbjct: 138 NEGAAETADASAPEI-----AAPAATPAMLAATESAPTDAGDEEPVKSEGAEVVRLDRFR 192
Query: 203 KK 204
KK
Sbjct: 193 KK 194
>gi|15965886|ref|NP_386239.1| hypothetical protein SMc01450 [Sinorhizobium meliloti 1021]
gi|307309645|ref|ZP_07589298.1| protein of unknown function DUF1321 [Sinorhizobium meliloti BL225C]
gi|307321783|ref|ZP_07601171.1| protein of unknown function DUF1321 [Sinorhizobium meliloti AK83]
gi|15075155|emb|CAC46712.1| Hypothetical protein SMc01450 [Sinorhizobium meliloti 1021]
gi|306892605|gb|EFN23403.1| protein of unknown function DUF1321 [Sinorhizobium meliloti AK83]
gi|306899980|gb|EFN30602.1| protein of unknown function DUF1321 [Sinorhizobium meliloti BL225C]
Length = 171
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 97/180 (53%), Positives = 121/180 (67%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV++ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVSATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDLKV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWDLKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVAA 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E T L + K ASV+SLD+FRKK
Sbjct: 121 GEEEAADSAEITAYPLDEATETATDD----------NTEKPDGPKGGGASVVSLDSFRKK 170
>gi|218463519|ref|ZP_03503610.1| hypothetical protein RetlK5_30634 [Rhizobium etli Kim 5]
Length = 171
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 130/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E +G++ P + + D + + K SV+SLD+FRKK
Sbjct: 121 AD----GEELPSGEITAYPVD------AAGKPDETAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|218507824|ref|ZP_03505702.1| hypothetical protein RetlB5_09535 [Rhizobium etli Brasil 5]
gi|327189903|gb|EGE57034.1| hypothetical protein RHECNPAF_5110016 [Rhizobium etli CNPAF512]
Length = 171
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 130/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E +G++ P + + D + + K SV+SLD+FRKK
Sbjct: 121 AD----GEELPSGEITAYPVD------AAAKPDETAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|190892529|ref|YP_001979071.1| hypothetical protein RHECIAT_CH0002944 [Rhizobium etli CIAT 652]
gi|190697808|gb|ACE91893.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 171
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 130/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E +G++ P + + D + + K SV+SLD+FRKK
Sbjct: 121 AD----GEDLPSGEITAYPVD------AAAKPDETAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|170750912|ref|YP_001757172.1| hypothetical protein Mrad2831_4523 [Methylobacterium radiotolerans
JCM 2831]
gi|170657434|gb|ACB26489.1| protein of unknown function DUF1321 [Methylobacterium radiotolerans
JCM 2831]
Length = 208
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 117/208 (56%), Gaps = 29/208 (13%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFY++F T A GVR+SQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRGVVRKVLTDAAREG-LMGEHHFYVSFRTEAPGVRMSQALREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL++PF+A+ GF+DPSV F L+FD+
Sbjct: 60 PQDMTIVLQHQFWDLNVTEHAFEVGLSFSGVPERLLVPFDALSGFFDPSVQFGLKFDLSE 119
Query: 145 EHIEEKLEGGNTGKVLT----------------------------SPDNFDKNQTNSVSQ 176
+ K + +
Sbjct: 120 AGETPEEANAAPAKPGPRGAGSEPGEVRPKSAGLATIGASAPKGLPAPAAQGEKAAGKAD 179
Query: 177 DSSKKKSTKKQNKNKMASVISLDNFRKK 204
D + + + KK+ + A V+SLD FRKK
Sbjct: 180 DKAPRPAAKKEGEEGSAEVVSLDAFRKK 207
>gi|86358404|ref|YP_470296.1| hypothetical protein RHE_CH02800 [Rhizobium etli CFN 42]
gi|86282506|gb|ABC91569.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 171
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 131/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E +G++ P + ++ D + + K SV+SLD+FRKK
Sbjct: 121 AD----GEELPSGEITAYPVD------SAGKPDEAAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|182677764|ref|YP_001831910.1| hypothetical protein Bind_0771 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633647|gb|ACB94421.1| protein of unknown function DUF1321 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 184
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 82/184 (44%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ G LPGEHHFYITF T+A GVR+S +R+ Y
Sbjct: 1 MAVDLIRYDLLVQDALRGVVRKVLTDAVREG-LPGEHHFYITFRTHAPGVRLSAAMREQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V + FEVGLSF VPE L IPF+A+ GF+DPSV F L+F++
Sbjct: 60 PDEMTIILQHQFWDLSVNEQAFEVGLSFKGVPEILRIPFDAVTGFFDPSVRFALKFELED 119
Query: 145 EHIEEKLEGGNTG----KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
E +E +T P S ++ + + A V+S+D
Sbjct: 120 EAVEAGANDTDTPDQGRPDGAVPLLVASESPAQGSSTAAGSSESSSLPAPEEAKVVSIDA 179
Query: 201 FRKK 204
FRKK
Sbjct: 180 FRKK 183
>gi|150397228|ref|YP_001327695.1| hypothetical protein Smed_2027 [Sinorhizobium medicae WSM419]
gi|150028743|gb|ABR60860.1| protein of unknown function DUF1321 [Sinorhizobium medicae WSM419]
Length = 171
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 95/180 (52%), Positives = 124/180 (68%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV++ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVSATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDLKV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWDLKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVAA 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+E T + + + + K AS++SLD+FRKK
Sbjct: 121 SEEQETDSAEITAYPVEE----------TSESVTDENTEKPDGPKGGGASIVSLDSFRKK 170
>gi|316933221|ref|YP_004108203.1| hypothetical protein Rpdx1_1858 [Rhodopseudomonas palustris DX-1]
gi|315600935|gb|ADU43470.1| hypothetical protein Rpdx1_1858 [Rhodopseudomonas palustris DX-1]
Length = 178
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSRADGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF AIK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFAAIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E I+E E + +++T+ S + ++S + + A V+ LD FRKK
Sbjct: 120 E-IDETGESDDATELVTAAPPPVALPPASATLENSAPSDDEPARSGEGAEVVRLDRFRKK 178
>gi|110634332|ref|YP_674540.1| hypothetical protein Meso_1982 [Mesorhizobium sp. BNC1]
gi|110285316|gb|ABG63375.1| protein of unknown function DUF1321 [Chelativorans sp. BNC1]
Length = 177
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 90/180 (50%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL +EALRG+V+ VL EVA G LPG HHF+I F TNA GVRIS L++ Y
Sbjct: 1 MPEDRIRYDILVQEALRGVVRKVLQEVAQAG-LPGNHHFFIRFVTNAPGVRISSRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV + FEV LSFS++PE+L IPF+A++GFYDPS +FE+EF+V
Sbjct: 60 PEEMTIVIQYQYWDLKVTEKGFEVVLSFSDIPEKLEIPFSAVRGFYDPSASFEVEFEVKQ 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E E + K + + + + +++ + K A V+SLD FRKK
Sbjct: 120 EQP--HAEPAEPTLLKEEAKQPAKRKPAAERKTEGNEAPAEEKAEGKGAEVVSLDAFRKK 177
>gi|227822603|ref|YP_002826575.1| hypothetical protein NGR_c20590 [Sinorhizobium fredii NGR234]
gi|227341604|gb|ACP25822.1| hypothetical protein NGR_c20590 [Sinorhizobium fredii NGR234]
Length = 170
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 125/180 (69%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGHLPGDHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFW+LKV + FE+GLSFS+ PE+LVIPFNA++GFYDPSVNFELEFDV
Sbjct: 61 PEQMTIVVQHQFWELKVSETGFEIGLSFSDTPEKLVIPFNAVRGFYDPSVNFELEFDVAS 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+E + ++ P N S K K SV+SLD+FRKK
Sbjct: 121 GEEDE----SESAEITAYPVN-------EADDASQKGPGPDGAPKGGGGSVVSLDSFRKK 169
>gi|115524158|ref|YP_781069.1| hypothetical protein RPE_2145 [Rhodopseudomonas palustris BisA53]
gi|115518105|gb|ABJ06089.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisA53]
Length = 169
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLTDAAEHG-LPGEHHFFITFLSRAEGVKMSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MT+++Q+QFWDL V ++ FEVGLSF VPERLV+PF+AIK F DPSV F L+F+
Sbjct: 60 PTEMTVILQHQFWDLVVTEDRFEVGLSFGGVPERLVVPFSAIKSFLDPSVEFGLQFEPDA 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E+ T + +Q + + + + ++ A V+ LD FRKK
Sbjct: 120 PADEQAANEAETPDGVGI----------GSAQAGTGEPTDEPTKPSEGAEVVRLDRFRKK 169
>gi|254719437|ref|ZP_05181248.1| hypothetical protein Bru83_07818 [Brucella sp. 83/13]
gi|265984441|ref|ZP_06097176.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839214|ref|ZP_07472031.1| Hypothetical protein BROD_2062 [Brucella sp. NF 2653]
gi|264663033|gb|EEZ33294.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405761|gb|EFM62023.1| Hypothetical protein BROD_2062 [Brucella sp. NF 2653]
Length = 189
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 93/190 (48%), Positives = 120/190 (63%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTN----------SVSQDSSKKKSTKKQNKNKMAS 194
+ GN + + S+++ + + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKANKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPSAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|209550126|ref|YP_002282043.1| hypothetical protein Rleg2_2544 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535882|gb|ACI55817.1| protein of unknown function DUF1321 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 171
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/180 (55%), Positives = 130/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV + G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVGATGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ ++HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITESHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E +G++ P + + D + + K SV+SLD+FRKK
Sbjct: 121 AD----GEELPSGEITAYPVD------AAAKPDEAAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|148560026|ref|YP_001259299.1| hypothetical protein BOV_1361 [Brucella ovis ATCC 25840]
gi|254702125|ref|ZP_05163953.1| hypothetical protein Bsuib55_14874 [Brucella suis bv. 5 str. 513]
gi|254708077|ref|ZP_05169905.1| hypothetical protein BpinM_14262 [Brucella pinnipedialis
M163/99/10]
gi|254710447|ref|ZP_05172258.1| hypothetical protein BpinB_09312 [Brucella pinnipedialis B2/94]
gi|254714440|ref|ZP_05176251.1| hypothetical protein BcetM6_14093 [Brucella ceti M644/93/1]
gi|254717338|ref|ZP_05179149.1| hypothetical protein BcetM_13222 [Brucella ceti M13/05/1]
gi|256031941|ref|ZP_05445555.1| hypothetical protein BpinM2_15084 [Brucella pinnipedialis
M292/94/1]
gi|256061462|ref|ZP_05451606.1| hypothetical protein Bneo5_14000 [Brucella neotomae 5K33]
gi|256160139|ref|ZP_05457833.1| hypothetical protein BcetM4_14094 [Brucella ceti M490/95/1]
gi|256255345|ref|ZP_05460881.1| hypothetical protein BcetB_13864 [Brucella ceti B1/94]
gi|256369820|ref|YP_003107331.1| hypothetical protein BMI_I1416 [Brucella microti CCM 4915]
gi|260169077|ref|ZP_05755888.1| hypothetical protein BruF5_12099 [Brucella sp. F5/99]
gi|261219167|ref|ZP_05933448.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261222547|ref|ZP_05936828.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261315578|ref|ZP_05954775.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318017|ref|ZP_05957214.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261322228|ref|ZP_05961425.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261325469|ref|ZP_05964666.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261752696|ref|ZP_05996405.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261758583|ref|ZP_06002292.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265989048|ref|ZP_06101605.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265998512|ref|ZP_06111069.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|148371283|gb|ABQ61262.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|255999983|gb|ACU48382.1| hypothetical protein BMI_I1416 [Brucella microti CCM 4915]
gi|260921131|gb|EEX87784.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260924256|gb|EEX90824.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294918|gb|EEX98414.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297240|gb|EEY00737.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301449|gb|EEY04946.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261304604|gb|EEY08101.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738567|gb|EEY26563.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261742449|gb|EEY30375.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262553136|gb|EEZ08970.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264661245|gb|EEZ31506.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 189
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 96/190 (50%), Positives = 126/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQT---------NSVSQDSSKKKSTKKQNKNKMAS 194
+ GN + +P+ DK + + S+++ + + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|306843249|ref|ZP_07475859.1| Hypothetical protein BIBO2_3005 [Brucella sp. BO2]
gi|306844303|ref|ZP_07476895.1| Hypothetical protein BIBO1_0974 [Brucella sp. BO1]
gi|306275375|gb|EFM57116.1| Hypothetical protein BIBO1_0974 [Brucella sp. BO1]
gi|306286572|gb|EFM58151.1| Hypothetical protein BIBO2_3005 [Brucella sp. BO2]
Length = 189
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 96/190 (50%), Positives = 126/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQT---------NSVSQDSSKKKSTKKQNKNKMAS 194
+ GN + +P+ DK + + S+++ + + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPSAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|13471488|ref|NP_103054.1| hypothetical protein mlr1474 [Mesorhizobium loti MAFF303099]
gi|14022230|dbj|BAB48840.1| mlr1474 [Mesorhizobium loti MAFF303099]
Length = 178
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E+ + LT + K + + +KK + K A V+SLD FRKK
Sbjct: 120 DAQPEEEPAQPASEPLTIV-SEKKPKAEKKAAAEPEKKPAATEAGAKGAEVVSLDAFRKK 178
>gi|116253000|ref|YP_768838.1| hypothetical protein RL3257 [Rhizobium leguminosarum bv. viciae
3841]
gi|115257648|emb|CAK08745.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 171
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 100/180 (55%), Positives = 130/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGRLPGDHHFFITFLTGATGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWD+K+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDMKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E +G++ P + + D + + K SV+SLD+FRKK
Sbjct: 121 AD----GEELPSGEITAYPVD------AAGKPDDAAGAKPADGEEKKPGSVVSLDSFRKK 170
>gi|17986886|ref|NP_539520.1| hypothetical protein BMEI0603 [Brucella melitensis bv. 1 str. 16M]
gi|225852886|ref|YP_002733119.1| hypothetical protein BMEA_A1452 [Brucella melitensis ATCC 23457]
gi|256045035|ref|ZP_05447936.1| hypothetical protein Bmelb1R_11134 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263632|ref|ZP_05466164.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260565366|ref|ZP_05835850.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265991462|ref|ZP_06104019.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17982527|gb|AAL51784.1| hypothetical protein BMEI0603 [Brucella melitensis bv. 1 str. 16M]
gi|225641251|gb|ACO01165.1| protein of unknown function DUF1321 [Brucella melitensis ATCC
23457]
gi|260151434|gb|EEW86528.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263002246|gb|EEZ14821.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093683|gb|EEZ17688.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326409428|gb|ADZ66493.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539135|gb|ADZ87350.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 189
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQT---------NSVSQDSSKKKSTKKQNKNKMAS 194
+ GN + +P+ DK + + S+++ + + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|27381629|ref|NP_773158.1| hypothetical protein blr6518 [Bradyrhizobium japonicum USDA 110]
gi|27354797|dbj|BAC51783.1| blr6518 [Bradyrhizobium japonicum USDA 110]
Length = 172
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 83/180 (46%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ AS G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRKVLTDAASHG-LPGEHHFFITFVSKAEGVKLSSRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL VL++ FEVGLSF +PERLV+PF+AIK F DPSV F L+FD
Sbjct: 60 PEEMTIILQHQFWDLTVLEDRFEVGLSFGGIPERLVVPFSAIKSFLDPSVKFGLQFDTSD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ L + + + D ++ A V+ LD FRKK
Sbjct: 120 VAEV-------APETLPAAPAPSALSVPTPATDKAETAEEPTPPSQGGAEVVRLDRFRKK 172
>gi|118590865|ref|ZP_01548265.1| hypothetical protein SIAM614_19431 [Stappia aggregata IAM 12614]
gi|118436387|gb|EAV43028.1| hypothetical protein SIAM614_19431 [Stappia aggregata IAM 12614]
Length = 191
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 12/191 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYDIL ++ALRG VK +L+EV G LPG+HHFYI F TNA GVRISQ L++ Y
Sbjct: 1 MSEDLLRYDILIQDALRGAVKKILAEVGRTG-LPGDHHFYIAFDTNAPGVRISQRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV-- 142
P++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++PF+AIKGF+DPSV F LEFD
Sbjct: 60 PQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPFSAIKGFFDPSVQFALEFDPGK 119
Query: 143 ---------HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
E G D + ++ + ++ +K + +N +
Sbjct: 120 TAEELPEELLEAVEELARAEQEHGDNEAKQDEGNGDREAASAEPKAKPAAQATENSDGGG 179
Query: 194 SVISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 EVVSLDAFRKK 190
>gi|23502275|ref|NP_698402.1| hypothetical protein BR1404 [Brucella suis 1330]
gi|161619352|ref|YP_001593239.1| hypothetical protein BCAN_A1437 [Brucella canis ATCC 23365]
gi|163843660|ref|YP_001628064.1| hypothetical protein BSUIS_A1456 [Brucella suis ATCC 23445]
gi|254704662|ref|ZP_05166490.1| hypothetical protein Bsuib36_12237 [Brucella suis bv. 3 str. 686]
gi|260566090|ref|ZP_05836560.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261755356|ref|ZP_05999065.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|23348249|gb|AAN30317.1| conserved hypothetical protein [Brucella suis 1330]
gi|161336163|gb|ABX62468.1| protein of unknown function DUF1321 [Brucella canis ATCC 23365]
gi|163674383|gb|ABY38494.1| protein of unknown function DUF1321 [Brucella suis ATCC 23445]
gi|260155608|gb|EEW90688.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261745109|gb|EEY33035.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 189
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 96/190 (50%), Positives = 126/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFFTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQT---------NSVSQDSSKKKSTKKQNKNKMAS 194
+ GN + +P+ DK + + S+++ + + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|222086398|ref|YP_002544932.1| hypothetical protein Arad_2936 [Agrobacterium radiobacter K84]
gi|221723846|gb|ACM27002.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 169
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 131/180 (72%), Gaps = 12/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EV + G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLTEVGATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ ++ FE+GLSFS+VPE+LV+PFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITESLFEIGLSFSDVPEKLVVPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE TG++ P + ++ V K+ + K SV+SLD FRKK
Sbjct: 121 ADDEEM----PTGEITAYPVAAEGSEEPVV--------EAKEGEEKKPGSVVSLDAFRKK 168
>gi|218530840|ref|YP_002421656.1| hypothetical protein Mchl_2889 [Methylobacterium chloromethanicum
CM4]
gi|218523143|gb|ACK83728.1| protein of unknown function DUF1321 [Methylobacterium
chloromethanicum CM4]
Length = 217
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 121/217 (55%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTN-------------------------------- 172
E+ E + ++
Sbjct: 120 GAEGEQSEETQPSAPAKTGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 173 -----SVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+K ++ +K +++ A V+SLD FRKK
Sbjct: 180 RPDNKPEDGAEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|241205507|ref|YP_002976603.1| hypothetical protein Rleg_2803 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859397|gb|ACS57064.1| protein of unknown function DUF1321 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 171
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 131/180 (72%), Gaps = 10/180 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVAATGRLPGDHHFFITFLTGATGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWD+K+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDMKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E +G++ P + + D + T + K SV+SLD+FRKK
Sbjct: 121 AD----GEELPSGEITAYPVD------AASKPDDAAGAKTADGEEKKPGSVVSLDSFRKK 170
>gi|154245365|ref|YP_001416323.1| hypothetical protein Xaut_1418 [Xanthobacter autotrophicus Py2]
gi|154159450|gb|ABS66666.1| protein of unknown function DUF1321 [Xanthobacter autotrophicus
Py2]
Length = 198
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 84/198 (42%), Positives = 114/198 (57%), Gaps = 19/198 (9%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ DHIRYD+LA+EALR +V+ VL +VA G LPGEHHFYI+F T A GVR+SQ + + Y
Sbjct: 1 MSVDHIRYDLLAQEALRSVVRRVLLDVAKTG-LPGEHHFYISFDTRAPGVRLSQRMLEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDL V D FEVGLSF +PERL++PF+A+KGF+DPSV F L+F++
Sbjct: 60 PEEMTIVLQHQFWDLIVTDTTFEVGLSFGGIPERLLVPFSALKGFFDPSVKFGLQFELAA 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSS------------------KKKSTKK 186
E + + + S + + +
Sbjct: 120 NESEAEESDDSPFEAPRSANAPAPLRPARGAASEPVLASAVPTAASEAGATGQNTGQEAG 179
Query: 187 QNKNKMASVISLDNFRKK 204
+ A V+ LD FR K
Sbjct: 180 ERPASGAQVVQLDVFRNK 197
>gi|222149085|ref|YP_002550042.1| hypothetical protein Avi_2824 [Agrobacterium vitis S4]
gi|221736070|gb|ACM37033.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 169
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 103/180 (57%), Positives = 130/180 (72%), Gaps = 12/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPGEHHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLTEVAATGRLPGEHHFFITFLTGAPGVRISQHLKAKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWDLKV D+ FEVGLSFS+ PE+LVIPFNAI+GFYDPSVNFELEFDV
Sbjct: 61 AEQMTIVIQHQFWDLKVTDSLFEVGLSFSDTPEKLVIPFNAIRGFYDPSVNFELEFDVP- 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E N+ ++ P + ++ + D K + + K SV+SLD FRKK
Sbjct: 120 ----QVEEDENSAEITAYPLAAESEKSEDGAAD-------KPEGEKKEGSVVSLDAFRKK 168
>gi|188582029|ref|YP_001925474.1| hypothetical protein Mpop_2784 [Methylobacterium populi BJ001]
gi|179345527|gb|ACB80939.1| protein of unknown function DUF1321 [Methylobacterium populi BJ001]
Length = 220
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 90/220 (40%), Positives = 124/220 (56%), Gaps = 41/220 (18%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHI-EEKLEGGNTGKVLTSP---------------------------------------D 164
E+ E + + P
Sbjct: 120 GAEGEQTEETQPSAPIKPGPRGAASEPAEIKPKGTGLATVQSGQGGPKIVPALPAAGKAK 179
Query: 165 NFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
K+ S +K ++ +K +++ A V+SLD FRKK
Sbjct: 180 ADPKSDNKSEDGVEAKPEAAEKTDRDGTAEVVSLDAFRKK 219
>gi|192292379|ref|YP_001992984.1| hypothetical protein Rpal_4013 [Rhodopseudomonas palustris TIE-1]
gi|192286128|gb|ACF02509.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
TIE-1]
Length = 178
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++VA G LPGEHHF+ITF + GV++S L Y
Sbjct: 1 MAIDHIRYDVLARDALRGVLRHVLTDVAQHG-LPGEHHFFITFQSKGDGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+V+Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+
Sbjct: 60 PEEMTVVLQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVKFGLQFEAAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E E E + +++T+ T+S + DSS + A V+ LD FRKK
Sbjct: 120 EVD-ETGEADDGTELVTAAPAPVALSTSSATTDSSAPSDDDAPRSGEGAEVVRLDRFRKK 178
>gi|62290297|ref|YP_222090.1| hypothetical protein BruAb1_1399 [Brucella abortus bv. 1 str.
9-941]
gi|82700221|ref|YP_414795.1| hypothetical protein BAB1_1423 [Brucella melitensis biovar Abortus
2308]
gi|189024531|ref|YP_001935299.1| hypothetical protein BAbS19_I13300 [Brucella abortus S19]
gi|237815806|ref|ZP_04594803.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689599|ref|ZP_05152853.1| hypothetical protein Babob68_05389 [Brucella abortus bv. 6 str.
870]
gi|254694089|ref|ZP_05155917.1| hypothetical protein Babob3T_05384 [Brucella abortus bv. 3 str.
Tulya]
gi|254697741|ref|ZP_05159569.1| hypothetical protein Babob28_08558 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730630|ref|ZP_05189208.1| hypothetical protein Babob42_05414 [Brucella abortus bv. 4 str.
292]
gi|256257848|ref|ZP_05463384.1| hypothetical protein Babob9C_10986 [Brucella abortus bv. 9 str.
C68]
gi|260546840|ref|ZP_05822579.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755127|ref|ZP_05867475.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758346|ref|ZP_05870694.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762172|ref|ZP_05874515.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884139|ref|ZP_05895753.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214388|ref|ZP_05928669.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297248685|ref|ZP_06932403.1| hypothetical protein BAYG_01650 [Brucella abortus bv. 5 str. B3196]
gi|62196429|gb|AAX74729.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616322|emb|CAJ11379.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189020103|gb|ACD72825.1| hypothetical protein BAbS19_I13300 [Brucella abortus S19]
gi|237789104|gb|EEP63315.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260095890|gb|EEW79767.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260668664|gb|EEX55604.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672604|gb|EEX59425.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675235|gb|EEX62056.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873667|gb|EEX80736.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915995|gb|EEX82856.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297175854|gb|EFH35201.1| hypothetical protein BAYG_01650 [Brucella abortus bv. 5 str. B3196]
Length = 189
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQT---------NSVSQDSSKKKSTKKQNKNKMAS 194
+ GN + +P+ DK + + S+++ + + A
Sbjct: 120 FQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|90424761|ref|YP_533131.1| hypothetical protein RPC_3270 [Rhodopseudomonas palustris BisB18]
gi|90106775|gb|ABD88812.1| protein of unknown function DUF1321 [Rhodopseudomonas palustris
BisB18]
Length = 172
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+LA++ALRG+++ VL++ A G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDLIRYDVLARDALRGVLRQVLTDAAEHG-LPGEHHFFITFLSTAEGVKLSPRLLVQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF +IK F+DPSV F L+F+ +
Sbjct: 60 PQEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFASIKSFFDPSVEFGLQFEPSL 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ P + + ++ + + + K ++ A V+ LD FRKK
Sbjct: 120 PGEV----PAANQPAASVPASPAVPRDDAPAASETPAEQPK---PSEGAEVVRLDRFRKK 172
>gi|90419199|ref|ZP_01227109.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336136|gb|EAS49877.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 189
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 98/189 (51%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ V+ EV G LPG+HHF+ITF T A GVRIS LR+ Y
Sbjct: 1 MGQDHIRYDVLAQDALRGVIRKVIGEVVKTG-LPGDHHFFITFLTTAPGVRISSRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH- 143
PE MTIVIQ+Q+WDL+V D FEVGLSFS++PERL+IPF AI+GFYDP+VNFELEFDV
Sbjct: 60 PELMTIVIQHQYWDLQVTDTSFEVGLSFSDIPERLLIPFAAIRGFYDPAVNFELEFDVRG 119
Query: 144 IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK--------STKKQNKNKMASV 195
++ E+ EG + G Q + ++ +K+K + + K A V
Sbjct: 120 MDAANEQSEGADDGDTDEIGTASPPAQILTPTKLHAKEKVAAAPASDDASQSEEKKDAEV 179
Query: 196 ISLDNFRKK 204
+SLD FRKK
Sbjct: 180 VSLDAFRKK 188
>gi|304392195|ref|ZP_07374137.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303296424|gb|EFL90782.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 188
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 87/184 (47%), Positives = 115/184 (62%), Gaps = 2/184 (1%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D D IRYDILA+EALRG+V+ VL E A G LPGEHHFYITF T GVR+S +R
Sbjct: 6 DDTEIEDLIRYDILAQEALRGVVRKVLQEAARTG-LPGEHHFYITFDTGHAGVRLSSRMR 64
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
+ YP++MTIVIQ+QFWDL+ ++ F +GLSF +PE ++IPF A+ GF+DPSV F L+FD
Sbjct: 65 EKYPDEMTIVIQHQFWDLETTEHSFSIGLSFDGIPETMLIPFPAVTGFFDPSVQFGLQFD 124
Query: 142 VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ-DSSKKKSTKKQNKNKMASVISLDN 200
+E +E+ N V P ++ +K T+ + A V+SLD
Sbjct: 125 ADVEDEDEEEGPANPASVSALPSPVRVETDKERAEVKEAKLPETEDDGEAASADVVSLDA 184
Query: 201 FRKK 204
FRKK
Sbjct: 185 FRKK 188
>gi|146342424|ref|YP_001207472.1| hypothetical protein BRADO5583 [Bradyrhizobium sp. ORS278]
gi|146195230|emb|CAL79255.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 188
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 119/189 (62%), Gaps = 10/189 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VL++ A+ G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLTDAATHG-LPGEHHFFITFVSKAEGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PDEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPSE 119
Query: 145 EHIEE--------KLEGGNTGKVLTSPDNFDKNQTNSVSQDS-SKKKSTKKQNKNKMASV 195
E +L + +QT+ + D+ + + + + A V
Sbjct: 120 AIAETPAAPKLPAAPMPSAVPAILPTSAAKTSDQTSDKAGDNLADDEPAPPPSSGEGAEV 179
Query: 196 ISLDNFRKK 204
+ LD FRKK
Sbjct: 180 VRLDRFRKK 188
>gi|294852731|ref|ZP_06793404.1| hypothetical protein BAZG_01663 [Brucella sp. NVSL 07-0026]
gi|294821320|gb|EFG38319.1| hypothetical protein BAZG_01663 [Brucella sp. NVSL 07-0026]
Length = 189
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLT-SPDNFDKNQT---------NSVSQDSSKKKSTKKQNKNKMAS 194
+ GN + +P+ DK + + S+++ + + A
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTAD 179
Query: 195 VISLDNFRKK 204
V+ LD FRKK
Sbjct: 180 VVLLDAFRKK 189
>gi|299131896|ref|ZP_07025091.1| protein of unknown function DUF1321 [Afipia sp. 1NLS2]
gi|298592033|gb|EFI52233.1| protein of unknown function DUF1321 [Afipia sp. 1NLS2]
Length = 174
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 109/180 (60%), Gaps = 6/180 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+++ VLS+ A G LPG+HHFYITF + A GV++S L Y
Sbjct: 1 MATDLIRYDVLTRDALRGVLRRVLSDAAESG-LPGDHHFYITFLSTAEGVKLSPRLLSQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MT+++Q+QFWDL V ++HFEVGLSF +PERLV+PF+AI F+DPSV F L+F+
Sbjct: 60 PQEMTVILQHQFWDLVVTEDHFEVGLSFGGIPERLVVPFSAITRFFDPSVQFGLQFETAE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
I + + P + D + + A V+ LD FRKK
Sbjct: 120 AAIGDAEPAAAEVEKADPPASPDSPDNPDDDGGGGGG-----DHPREGAQVVRLDRFRKK 174
>gi|319782907|ref|YP_004142383.1| hypothetical protein Mesci_3209 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168795|gb|ADV12333.1| hypothetical protein Mesci_3209 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 178
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 100/180 (55%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ T + LT + ++ KK + K A V+SLD FRKK
Sbjct: 120 DGAAADEPAAPTPEPLTIVSEKKPKAEKKAAAEAEKKPAAADAAT-KGAEVVSLDAFRKK 178
>gi|153009103|ref|YP_001370318.1| hypothetical protein Oant_1773 [Ochrobactrum anthropi ATCC 49188]
gi|151560991|gb|ABS14489.1| protein of unknown function DUF1321 [Ochrobactrum anthropi ATCC
49188]
Length = 194
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 97/195 (49%), Positives = 121/195 (62%), Gaps = 16/195 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L +PF+A++GFYDPSVNFELEFDV I
Sbjct: 60 PEQMTIVLQHQFWDMLVTDQLFEVGLSFGDIPEKLTVPFSAVRGFYDPSVNFELEFDVAI 119
Query: 145 EHIE-EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK--------------KSTKKQNK 189
E + EGGN + P + S K +
Sbjct: 120 AQPESDNDEGGNVAPIEILPTEAPVEKAEKPKSKSRKTAAEKEAAAAKDNNADDGTDKEA 179
Query: 190 NKMASVISLDNFRKK 204
A V+SLD FRKK
Sbjct: 180 KPSADVVSLDAFRKK 194
>gi|239832281|ref|ZP_04680610.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824548|gb|EEQ96116.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 193
Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats.
Identities = 94/194 (48%), Positives = 120/194 (61%), Gaps = 15/194 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L +PF+A++GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTVPFSAVRGFYDPSVNFELEFDVAV 119
Query: 145 EHIE-EKLEGGNTGKVLTSPDNFDKNQTNSVSQDS-------------SKKKSTKKQNKN 190
E + EGGN + + + S +
Sbjct: 120 SQPESDNDEGGNVAPIEIASTEAPVEKAEKPKSKSRKTAAEKEAAASKDSNTDEADKEAK 179
Query: 191 KMASVISLDNFRKK 204
A V+SLD FRKK
Sbjct: 180 PSADVVSLDAFRKK 193
>gi|296446562|ref|ZP_06888504.1| protein of unknown function DUF1321 [Methylosinus trichosporium
OB3b]
gi|296255916|gb|EFH03001.1| protein of unknown function DUF1321 [Methylosinus trichosporium
OB3b]
Length = 177
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 66/180 (36%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+L ++ALRG+++ VL++ A G LPG+HHF I+F T A GV+IS L + +
Sbjct: 1 MSTDLIRYDLLLQDALRGVMRKVLADAALAGRLPGDHHFTISFRTRAPGVKISSRLAEQW 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTI++Q+Q+ +L V + F V LSF ++PE+L +PF A+ F DPSV F L+++V
Sbjct: 61 PHEMTIILQHQYSNLVVDERGFSVCLSFRSIPEQLYVPFEAVTVFSDPSVEFGLKWEVEE 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ P + +K + A ++S+D FRKK
Sbjct: 121 ASSSAPRDETP----APFPTRPPGVAAVPSAPKPAKAAERAAPEGEEEAKIVSIDAFRKK 176
>gi|254501136|ref|ZP_05113287.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437207|gb|EEE43886.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 191
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 121/191 (63%), Gaps = 12/191 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYDIL ++ALRG VK +L+EV G LPG+HHFYI F T A GV+ISQ L++ Y
Sbjct: 1 MSEDLLRYDILIQDALRGAVKKILAEVGRTG-LPGDHHFYIAFETTAPGVKISQRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++PF+AIKGF+DPSV F LEFD
Sbjct: 60 PQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPFSAIKGFFDPSVQFALEFDPGK 119
Query: 145 EHIEEKLE-----------GGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
E + T + L + DN + ++ +KK ++ +
Sbjct: 120 TAEELPEDLLEAVEELAKAEQETTEKLMTADNKQDDVPAVEAEKKTKKPDQDTEDGDGGG 179
Query: 194 SVISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 EVVSLDAFRKK 190
>gi|240139410|ref|YP_002963885.1| hypothetical protein MexAM1_META1p2855 [Methylobacterium extorquens
AM1]
gi|240009382|gb|ACS40608.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 217
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 121/217 (55%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHI---------------------EEKLEGGNTGKVLTSPDNFD---------------- 167
E E L + N
Sbjct: 120 GAEGEQAEETQPSAPAKAGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 168 KNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
K +K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKPEDGAEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|220920731|ref|YP_002496032.1| hypothetical protein Mnod_0697 [Methylobacterium nodulans ORS 2060]
gi|219945337|gb|ACL55729.1| protein of unknown function DUF1321 [Methylobacterium nodulans ORS
2060]
Length = 211
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 116/211 (54%), Gaps = 32/211 (15%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALR +V+ VL + A G L GEHHFY++F T+ GVRISQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRSVVRKVLGDAAREG-LAGEHHFYVSFRTDYPGVRISQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL++PF A+ GF+DPSV F L+F++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHAFEVGLSFSGVPERLLVPFEAVTGFFDPSVQFGLKFELGD 119
Query: 145 EHIEEKL----------------EGGNTGKVLTSPDNFDK---------------NQTNS 173
++ E + + K +
Sbjct: 120 GQAGDEAATPTGAGLRAIRGAGSEPSEAAPKVPALAGVPKVVPGADKAEAKPAAKDAAKD 179
Query: 174 VSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
++ SK + + ASV+SLD FRKK
Sbjct: 180 AAKTPSKPAAEEPAASESGASVVSLDAFRKK 210
>gi|325293417|ref|YP_004279281.1| hypothetical protein AGROH133_07312 [Agrobacterium sp. H13-3]
gi|325061270|gb|ADY64961.1| hypothetical protein AGROH133_07312 [Agrobacterium sp. H13-3]
Length = 170
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 128/180 (71%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWDLKV + FE+GLSFS+ PE+LV+P+NAI+GFYDPSVNFELEFDV +
Sbjct: 61 AEQMTIVIQHQFWDLKVTEIGFEIGLSFSDTPEKLVVPYNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE E T ++ ++ ++ ++ K + K SV+SLD FRKK
Sbjct: 121 ADEEELEEAEITAYPVS-----------HEAKPATTSETPKSGEEKKEGSVVSLDAFRKK 169
>gi|254561826|ref|YP_003068921.1| hypothetical protein METDI3421 [Methylobacterium extorquens DM4]
gi|254269104|emb|CAX25067.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 217
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 121/217 (55%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHI---------------------EEKLEGGNTGKVLTSPDNFD---------------- 167
E E L + N
Sbjct: 120 GAEGEQAEETQPSAPAKSGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 168 KNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
K +K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKPEDGSEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|15889336|ref|NP_355017.1| hypothetical protein Atu8171 [Agrobacterium tumefaciens str. C58]
gi|15157176|gb|AAK87802.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 168
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 125/180 (69%), Gaps = 13/180 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
E+MTIVIQ+QFWD+KV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV +
Sbjct: 61 AEQMTIVIQHQFWDMKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE E T ++ + ++ K + K SV+SLD FRKK
Sbjct: 121 AEEEEMEEAEITAYPVS-------------HEAKPASETPKSGEEKKEGSVVSLDAFRKK 167
>gi|114706846|ref|ZP_01439746.1| hypothetical protein FP2506_18559 [Fulvimarina pelagi HTCC2506]
gi|114537794|gb|EAU40918.1| hypothetical protein FP2506_18559 [Fulvimarina pelagi HTCC2506]
Length = 190
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 93/190 (48%), Positives = 126/190 (66%), Gaps = 11/190 (5%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+LA++ALRG+++ VL EVA G LPGEHHF+ITF T+A GVRIS LR+ Y
Sbjct: 1 MSQDLIRYDVLAQDALRGVIRKVLGEVAKTG-LPGEHHFFITFLTSAPGVRISSRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+Q+WDL V +N FE+GLSFS++PE+L++PF+A++GFYDPSVNFELEFDV
Sbjct: 60 PDLMTIVVQHQYWDLSVTENSFEIGLSFSDIPEKLLVPFSAVRGFYDPSVNFELEFDVRG 119
Query: 145 EHIEEKLEGGNT----------GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS 194
E T G + +P + S S + + + + + A
Sbjct: 120 AEAANSDEAEETVSADDAKPSGGALSATPLPVREKAEASASSSADSENDDESEEERPDAQ 179
Query: 195 VISLDNFRKK 204
V+SLD FRKK
Sbjct: 180 VVSLDAFRKK 189
>gi|148257353|ref|YP_001241938.1| hypothetical protein BBta_6105 [Bradyrhizobium sp. BTAi1]
gi|146409526|gb|ABQ38032.1| hypothetical protein BBta_6105 [Bradyrhizobium sp. BTAi1]
Length = 175
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 112/180 (62%), Gaps = 5/180 (2%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA++ALRG+++ VLS+ A+ G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLARDALRGVLRRVLSDAAAHG-LPGEHHFFITFVSKAEGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PF+AIK F+DPSV F L+F+
Sbjct: 60 PEEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPSE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + S + D + + + A V+ LD FRKK
Sbjct: 120 AIAETPASPKLPAAPAPAALAPAPVAAASAADDQPEPPAP----SGEGAEVVRLDRFRKK 175
>gi|163852082|ref|YP_001640125.1| hypothetical protein Mext_2662 [Methylobacterium extorquens PA1]
gi|163663687|gb|ABY31054.1| protein of unknown function DUF1321 [Methylobacterium extorquens
PA1]
Length = 217
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 122/217 (56%), Gaps = 38/217 (17%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAAREG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS VPERL+IPF+A+ GF+DPSV F L+FD++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSGVPERLLIPFDALSGFFDPSVQFGLKFDLNE 119
Query: 145 EHI---------------------EEKLEGGNTGKVLTSPDNFDKNQTNSVSQ------- 176
E E L + N K +
Sbjct: 120 GAEGEQAEETQPSAPAKAGPRGAGSEPAEIKPKSTGLATVQNGPKIVPALPASGKAKTDL 179
Query: 177 ---------DSSKKKSTKKQNKNKMASVISLDNFRKK 204
+K ++ +K +++ A V+SLD FRKK
Sbjct: 180 KPDNKLDDGSEAKPEAAEKTDRDGTAEVVSLDAFRKK 216
>gi|328542988|ref|YP_004303097.1| hypothetical protein SL003B_1369 [polymorphum gilvum SL003B-26A1]
gi|326412734|gb|ADZ69797.1| hypothetical protein SL003B_1369 [Polymorphum gilvum SL003B-26A1]
Length = 202
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 114/202 (56%), Gaps = 23/202 (11%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYDIL ++ALRG VK +L+EVA G LPG+HHFYI F T A GVRIS +R+ Y
Sbjct: 1 MAEDLLRYDILVQDALRGAVKKILAEVARTG-LPGDHHFYIAFDTTAPGVRISSRIRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q+QFWDL + ++ FEVGLSF VPE+L+IPF+AIKGF+DPSV F LEF+
Sbjct: 60 PSEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLIPFSAIKGFFDPSVQFALEFEPGK 119
Query: 145 EHIEEKL----------------------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
E + +P ++ + + + +K
Sbjct: 120 TAEELPEDLLEAVGELADVEASAARDLVRDADKAPAANKTPRKSKRDAAPTKADVAKGEK 179
Query: 183 STKKQNKNKMASVISLDNFRKK 204
+ V+SLD FRKK
Sbjct: 180 EATPKASEAGGEVVSLDAFRKK 201
>gi|163735111|ref|ZP_02142547.1| hypothetical protein RLO149_22845 [Roseobacter litoralis Och 149]
gi|161391569|gb|EDQ15902.1| hypothetical protein RLO149_22845 [Roseobacter litoralis Och 149]
Length = 175
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 100/203 (49%), Gaps = 28/203 (13%)
Query: 1 MVSLWNFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGE 60
M++ FF+SR + I Y L EA+RGL++ VL +V G LPGE
Sbjct: 1 MLATEEFFASRNK------------MTRSIDYGNLMHEAMRGLIRKVLLDVCDNG-LPGE 47
Query: 61 HHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
HHF+ITF T ++ L YP +MT+V+Q+ + +L+V D F V L+F + PE L
Sbjct: 48 HHFFITFDTGHPDAELADWLFDRYPGEMTVVMQHWYDNLEVTDEGFSVTLNFGDAPEPLY 107
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
IP++AIK F DPSV F L F+ + EE + +
Sbjct: 108 IPYDAIKTFVDPSVEFGLRFETQSDEDEE---------------AAPSQLPATSQVEKPD 152
Query: 181 KKSTKKQNKNKMASVISLDNFRK 203
+ + + K A ++SLD+FRK
Sbjct: 153 TEKAETDDGAKDAEIVSLDSFRK 175
>gi|312115719|ref|YP_004013315.1| hypothetical protein Rvan_3012 [Rhodomicrobium vannielii ATCC
17100]
gi|311220848|gb|ADP72216.1| hypothetical protein Rvan_3012 [Rhodomicrobium vannielii ATCC
17100]
Length = 184
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 6/185 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D I YD L EALRG+V+ VL V G +PG+HHFYITF T + GV +S+ L+ Y
Sbjct: 1 MPEDTIPYDDLVLEALRGVVRSVLLRVLKRG-IPGDHHFYITFDTRSPGVGLSKRLKDQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q+QFWDL V ++ FEV LSF+N+PERLVIPF+A++ F DPSV+F L
Sbjct: 60 PTEMTIVLQHQFWDLAVTEDRFEVRLSFNNIPERLVIPFSAVRIFQDPSVHFALGLRASE 119
Query: 145 EHIEEKLEG-----GNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
+ + EG + N ++ ++++ + + K A V+SLD
Sbjct: 120 GELAKADEGLSLVPSPLAEQEVQAIPHHDNSQPEIAIEATEDEDDAAEKHRKTAEVVSLD 179
Query: 200 NFRKK 204
FRKK
Sbjct: 180 KFRKK 184
>gi|260462151|ref|ZP_05810395.1| protein of unknown function DUF1321 [Mesorhizobium opportunistum
WSM2075]
gi|259032011|gb|EEW33278.1| protein of unknown function DUF1321 [Mesorhizobium opportunistum
WSM2075]
Length = 179
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 99/180 (55%), Positives = 121/180 (67%), Gaps = 1/180 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVR+S LR+ Y
Sbjct: 1 MADDHIRYDILAQEALRGVMRKVLAEVARTG-LPGNHHFFITFLTGAPGVRVSSRLRERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ Q+WDLKV D FEVGLSFS+VPE+L IPF+A++GFYDPSVNFELEFDV
Sbjct: 60 PEQMTIVIQFQYWDLKVTDTGFEVGLSFSDVPEKLEIPFSAVRGFYDPSVNFELEFDVKT 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + + + K + + +KK K A V+SLD FRKK
Sbjct: 120 EGAATEELEDQATPEPLTIVSEKKTKAEKKAAAEPEKKPAAGDAAAKGAEVVSLDAFRKK 179
>gi|209884415|ref|YP_002288272.1| hypothetical protein OCAR_5275 [Oligotropha carboxidovorans OM5]
gi|209872611|gb|ACI92407.1| protein of unknown function [Oligotropha carboxidovorans OM5]
Length = 169
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 109/180 (60%), Gaps = 11/180 (6%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+++ VL++ A G LPGEHHFYITF +NA GVRIS L Y
Sbjct: 1 MATDLIRYDVLTRDALRGVLRRVLTDAAEHG-LPGEHHFYITFLSNADGVRISPRLLSQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTI++Q+QFWDL V ++ FEVGLSF +PERLV+PFNAI F+DP+V F L+F+
Sbjct: 60 PQEMTIILQHQFWDLVVREDEFEVGLSFGGIPERLVVPFNAITRFFDPAVQFGLQFETAE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + + L P +N + A V+ LD FRKK
Sbjct: 120 MAGEIEPATIEEAEKLAIPAETTENPDDDGDDHPHDGG----------AQVVRLDRFRKK 169
>gi|86749154|ref|YP_485650.1| hypothetical protein RPB_2031 [Rhodopseudomonas palustris HaA2]
gi|86572182|gb|ABD06739.1| Protein of unknown function DUF1321 [Rhodopseudomonas palustris
HaA2]
Length = 174
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 6/180 (3%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYD+LA+EALRG+++ VL++VA G LPGEHHF+ITF + A GV++S L Y
Sbjct: 1 MATDHIRYDVLAREALRGVLRQVLTDVAQHG-LPGEHHFFITFLSKADGVKLSPRLLAQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MT+++Q+QFWDL V ++ FEVGLSF +PERLV+PF++IK F+DPSV F L+F+
Sbjct: 60 PEEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFSSIKSFFDPSVQFGLQFEAGD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + ++ ++ + K++ A V+ LD FRKK
Sbjct: 120 GAAEAADTDAPEIAPPAPSPALPAAADSGPAEIAA-----DEAVKSEGAEVVRLDRFRKK 174
>gi|163868695|ref|YP_001609907.1| hypothetical protein Btr_1573 [Bartonella tribocorum CIP 105476]
gi|161018354|emb|CAK01912.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 181
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 85/182 (46%), Positives = 114/182 (62%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEVA G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MITDQIRYDILVQDALRGVIRKVLSEVAKAG-LPGNHHFFITFFTNAPGVKISPRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPF +I+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLSVSETAFEVTLSFREITEKLVIPFTSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDS--SKKKSTKKQNKNKMASVISLDNFR 202
+ + E + + Q N+ +++ S KK + + A V+SLD+FR
Sbjct: 120 KLPSGESEDAENTPSTPIALSNQQKQENTPTKEQNLSTKKEPLNNDTKQSADVVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|288958773|ref|YP_003449114.1| hypothetical protein AZL_019320 [Azospirillum sp. B510]
gi|288911081|dbj|BAI72570.1| hypothetical protein AZL_019320 [Azospirillum sp. B510]
Length = 165
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M + +RYD + + ALRG+V+ L+EVA G LPG HHFY+TF T GV I L Y
Sbjct: 1 MPKEQLRYDRMVETALRGVVRDALTEVAERG-LPGNHHFYLTFRTGYPGVDIPDYLAGQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q Q++ L V D+HFEV LSF+NV ERLVIPF AI F DPSVNF L+F
Sbjct: 60 PNEMTIVLQFQYYGLDVTDDHFEVTLSFNNVHERLVIPFGAITTFADPSVNFALQFQ--- 116
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
L + +V T P + ++++ + K V++LD FRKK
Sbjct: 117 -----PLAATESAEVATMPPRAAAERVEEKVEEAAPAEEP------KRGEVVALDAFRKK 165
>gi|240850874|ref|YP_002972274.1| hypothetical protein Bgr_13790 [Bartonella grahamii as4aup]
gi|240267997|gb|ACS51585.1| hypothetical protein Bgr_13790 [Bartonella grahamii as4aup]
Length = 181
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 84/182 (46%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEV+ G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MVKDQIRYDILVQDALRGVIRKVLSEVSKAG-LPGNHHFFITFLTNAPGVKISPRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPF +I+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLSVSETAFEVTLSFREITEKLVIPFTSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLT--SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ E + K T + Q+ S K + + + A V+SLD+FR
Sbjct: 120 NLTSGESENSENTSTTPITLSNTQKKENTLTKEQNFSTNKESSNSDTKQSADVVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|319899136|ref|YP_004159229.1| hypothetical protein BARCL_0977 [Bartonella clarridgeiae 73]
gi|319403100|emb|CBI76658.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 181
Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EV G LPG HHF+ITF TNA G++IS L++ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVGKAG-LPGNHHFFITFLTNAPGIKISPRLQERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + ERLVIPFN+I+ FYDP+ FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITERLVIPFNSIQVFYDPTAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDS--SKKKSTKKQNKNKMASVISLDNFR 202
+ E + + + N ++ S K K + + A ++SLD+FR
Sbjct: 120 NLTSGENESSENTSCTPVIPSNKQKKENVSTKLSNLKKDKEPSNSDSKQSADIVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|170739400|ref|YP_001768055.1| hypothetical protein M446_1093 [Methylobacterium sp. 4-46]
gi|168193674|gb|ACA15621.1| protein of unknown function DUF1321 [Methylobacterium sp. 4-46]
Length = 208
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 113/208 (54%), Gaps = 29/208 (13%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALR +V+ VL + A G L GEHHFY++F T+ GVRISQ LR+ Y
Sbjct: 1 MADDLIRYDLLVQDALRSVVRKVLGDAARDG-LAGEHHFYVSFRTDYPGVRISQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P+ MTIV+Q+QFWDL V ++ FEVGLSFS +PERL++PF A+ GF+DPSV F L+F++
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHAFEVGLSFSGIPERLLVPFEAVTGFFDPSVQFGLKFELGE 119
Query: 145 EHIEEK-----------------LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK------ 181
E+ + P + + +K
Sbjct: 120 GQAGEESAAPAASPGASLRAIRGAGSEPSEAAPKVPALAAAPKMLGADKPEAKPAGKEAA 179
Query: 182 -----KSTKKQNKNKMASVISLDNFRKK 204
+ + ASV+SLD FRKK
Sbjct: 180 KAPAKPAEEPAAPEGGASVVSLDAFRKK 207
>gi|119390693|pdb|2NYS|A Chain A, X-Ray Crystal Structure Of Protein Agr_c_3712 From
Agrobacterium Tumefaciens. Northeast Structural Genomics
Consortium Target Atr88.
gi|119390694|pdb|2NYS|B Chain B, X-Ray Crystal Structure Of Protein Agr_c_3712 From
Agrobacterium Tumefaciens. Northeast Structural Genomics
Consortium Target Atr88
Length = 176
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 96/178 (53%), Positives = 122/178 (68%), Gaps = 13/178 (7%)
Query: 27 YDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPE 86
DHIRYDILA++ALRG+++ VL EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y E
Sbjct: 3 QDHIRYDILAQDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAE 62
Query: 87 KMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
+ TIVIQ+QFWD KV + FE+GLSFS+ PE+LVIP+NAI+GFYDPSVNFELEFDV +
Sbjct: 63 QXTIVIQHQFWDXKVTETGFEIGLSFSDTPEKLVIPYNAIRGFYDPSVNFELEFDVPLAK 122
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
EE E T ++ + ++ K + K SV+SLD FRKK
Sbjct: 123 EEEXEEAEITAYPVS-------------HEAKPASETPKSGEEKKEGSVVSLDAFRKK 167
>gi|154252888|ref|YP_001413712.1| hypothetical protein Plav_2446 [Parvibaculum lavamentivorans DS-1]
gi|154156838|gb|ABS64055.1| protein of unknown function DUF1321 [Parvibaculum lavamentivorans
DS-1]
Length = 160
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 108/180 (60%), Gaps = 20/180 (11%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYD+LA++ALRG+V+ L +A LPGEHHFYI+F T+A GV +S+ LRK Y
Sbjct: 1 MAEDQMRYDMLAQDALRGVVRRALK-IARDEGLPGEHHFYISFRTDAPGVEVSEKLRKQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE++TIV+Q+QFW+L+V + F V L+F+ +PERLV+PF A++GF+DPSV F L+F V
Sbjct: 60 PEEITIVLQHQFWNLEVNEERFSVDLTFNKIPERLVVPFAAVQGFFDPSVQFGLQFQVQG 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ N +T ++ + V+SLD FRKK
Sbjct: 120 VSAGTNVAKDNATGGVTEASKPEEPAPAA-------------------GDVVSLDAFRKK 160
>gi|217976786|ref|YP_002360933.1| protein of unknown function DUF1321 [Methylocella silvestris BL2]
gi|217502162|gb|ACK49571.1| protein of unknown function DUF1321 [Methylocella silvestris BL2]
Length = 180
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 79/180 (43%), Positives = 113/180 (62%), Gaps = 1/180 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL +EALRG+V+ VL+++A G L GEHHFYITF TN RGVR+S +R+ Y
Sbjct: 1 MAADLIRYDILVQEALRGVVRKVLADMAREG-LVGEHHFYITFRTNGRGVRLSARMRELY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTI++Q+QFWDL V ++ FEVGLSF NVPE L++PF+A+ F DP+ F+LEF +
Sbjct: 60 PEEMTIILQHQFWDLSVSEHAFEVGLSFKNVPEMLLVPFDAVTRFSDPAAGFDLEFKLDE 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ G+ + + + + ++ +K ++S+D FRKK
Sbjct: 120 AVETSANDAGSPVEGDAPALSLPEKASLQGAESDAKVIKEMNVTSAGEDKIVSIDKFRKK 179
>gi|159044876|ref|YP_001533670.1| hypothetical protein Dshi_2333 [Dinoroseobacter shibae DFL 12]
gi|157912636|gb|ABV94069.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 175
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 3/178 (1%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
+ + Y A+R L++ VL EVA+ G LPGEHHF+ITF T GV +S LR+ YP
Sbjct: 1 MAERLDYGNRMHRAMRALIQDVLREVAADG-LPGEHHFFITFDTQHPGVELSDWLRERYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MTIV+Q+ F L+V + F V L+F + PE L +P +AI+ F DPSV F L F+ +
Sbjct: 60 DEMTIVLQHWFDGLEVREADFSVVLNFGDQPEALTVPLDAIRTFVDPSVEFGLRFE--TQ 117
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + + + ++K + KK +K A ++SLD+FRK
Sbjct: 118 DDADFEDEEDDEEETHEVTALVPPPEARPHKPTAKDTTEKKPGTSKDAEIVSLDSFRK 175
>gi|254470422|ref|ZP_05083826.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211960733|gb|EEA95929.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 202
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 83/202 (41%), Positives = 112/202 (55%), Gaps = 23/202 (11%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDI+ ++ALR V+ +L EV G LPGEHHFYI F T A GV+IS L++ Y
Sbjct: 1 MAEDLIRYDIIIQDALRSAVRKILVEVNRAG-LPGEHHFYIAFETTAPGVKISSRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QFWDL++ ++ FEVGLSF VPE L +PF+AIKGF+DPSV F LEF+
Sbjct: 60 PKEMTIVLQHQFWDLQITEHAFEVGLSFGGVPEHLYVPFSAIKGFFDPSVQFALEFEPGK 119
Query: 145 EHIEEKLEGGNTGKVLTSPDN----------------------FDKNQTNSVSQDSSKKK 182
E E + L S + + ++ +
Sbjct: 120 TGEELPAEFRIAERDLDSVEEFHARLETAVEQAEEEEAKTASTAEDTAGDAEEDKEKSEA 179
Query: 183 STKKQNKNKMASVISLDNFRKK 204
++ A V+SLD FRKK
Sbjct: 180 DETSSEESGSAQVVSLDAFRKK 201
>gi|49475837|ref|YP_033878.1| hypothetical protein BH11040 [Bartonella henselae str. Houston-1]
gi|49238645|emb|CAF27889.1| hypothetical protein BH11040 [Bartonella henselae str. Houston-1]
Length = 181
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 86/182 (47%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VLSEVA G LPG HHF+ITF TNA GV+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLSEVAKAG-LPGSHHFFITFLTNAPGVKISTRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF V E+LVIPF++I+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLNVSETAFEVTLSFREVSEKLVIPFHSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNT--GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
++ E + D K + Q S K + + + A V+SLD+FR
Sbjct: 120 NLNSKEGENLENIASTPVILSDTQKKEKKFPKEQISKTNKDSSNNDTKQSADVVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|319405987|emb|CBI79619.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 181
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 80/182 (43%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSS--KKKSTKKQNKNKMASVISLDNFR 202
+ + + + + N ++ S+ +K + + + A+++SLD+FR
Sbjct: 120 NLTSGESKNLENASCAPVIPSDKQKKENISTKISTLKTEKESSNNDSKQSANIVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|319404489|emb|CBI78096.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 181
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPP 119
Query: 145 EHIEEKLEGGNTG--KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
I + + T T D K ++ + +K + + A ++SLD+FR
Sbjct: 120 SLISGENQNPETASCSPFTPSDKQKKENISTKISNLKTEKEPSNNDSKQSADIVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|218671608|ref|ZP_03521278.1| hypothetical protein RetlG_08073 [Rhizobium etli GR56]
Length = 161
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 94/158 (59%), Positives = 118/158 (74%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIVIQ+QFWDLK+ + HFE+GLSFS+VPE+LVIPFNAI+GFYDPSVNFELEFDV +
Sbjct: 61 PEQMTIVIQHQFWDLKITETHFEIGLSFSDVPEKLVIPFNAIRGFYDPSVNFELEFDVPL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
EE G T + + D+ + KK
Sbjct: 121 ADGEELPSGEITAYPVDAAGKPDETAGAKPADGEEKKP 158
>gi|83310429|ref|YP_420693.1| hypothetical protein amb1330 [Magnetospirillum magneticum AMB-1]
gi|82945270|dbj|BAE50134.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 167
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 100/175 (57%), Gaps = 11/175 (6%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+RYD + +EALRG+V+ L A G LPGEHHFYITF + V +S +L+ +P++MT
Sbjct: 4 LRYDKMVEEALRGVVRDSLHFAAEHG-LPGEHHFYITFRPHHPDVGMSDHLKARHPDEMT 62
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QFWDL V ++ F V LSFS PE +VIPF+A+ GF DPS F L+F I ++
Sbjct: 63 IVLQHQFWDLNVTEDGFSVTLSFSGKPETMVIPFSAVTGFADPSAKFGLQFQA-IPGDDD 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + P S+K + Q +V++LD FRKK
Sbjct: 122 DDDDMEIDEFDPQPPRG---------AASAKDDEPEPQPPGGDGNVVALDKFRKK 167
>gi|319407481|emb|CBI81131.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 181
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/182 (44%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+K Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISPRLQKRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+LVIPFN+I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLSVSETAFEVTLSFGEITEKLVIPFNSIQVFYDPIAAFETAFDLPP 119
Query: 145 EHIEEKLEGGNTGKVLT--SPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + T D K ++ + +K + + A ++SLD+FR
Sbjct: 120 TLTSGESQNLETASCSPFIPSDKQKKESISTKISNLKTEKEPSNNDSKQSADIVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|49474439|ref|YP_032481.1| hypothetical protein BQ08680 [Bartonella quintana str. Toulouse]
gi|49239943|emb|CAF26347.1| hypothetical protein BQ08680 [Bartonella quintana str. Toulouse]
Length = 181
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 86/182 (47%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF TNA G++IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFLTNAPGIKISTRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QF DL V + FEV LSF + E+LVIPFNAI+ FYDP FE FD+
Sbjct: 60 PEQMTIVLQHQFRDLSVSEIAFEVTLSFKEIAEKLVIPFNAIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTS--PDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
K E + D K + Q+S K + + + A V+SLD+FR
Sbjct: 120 NPTSGKDENLENTAPASVMLSDKQKKANIFTKEQNSKANKESSNNDSKQSADVVSLDSFR 179
Query: 203 KK 204
KK
Sbjct: 180 KK 181
>gi|46202069|ref|ZP_00053809.2| COG3814: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 169
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 9/175 (5%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+RYD + +EALRG+V+ L A G LPGEHHFYITF + V ++ +L+ +P++MT
Sbjct: 4 LRYDKMVEEALRGVVRDSLVFAAEHG-LPGEHHFYITFRPHHPDVEMADHLKARHPDEMT 62
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QFWDL V ++ F V LSFS PE++VIPF+++ GF DPS F L+F
Sbjct: 63 IVLQHQFWDLFVTEDGFTVTLSFSGKPEKMVIPFSSVTGFADPSAKFGLQFQA------- 115
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ G + D FD + + + + V++LD FRKK
Sbjct: 116 -IPGDDEDDDDMEVDAFDPQPPRGSASSTDDEPEPNPPGEGGDGKVVALDKFRKK 169
>gi|209965295|ref|YP_002298210.1| hypothetical protein RC1_2004 [Rhodospirillum centenum SW]
gi|209958761|gb|ACI99397.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 157
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 73/180 (40%), Positives = 100/180 (55%), Gaps = 23/180 (12%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ + +RYD + + ALRG+V+ L+EV G LPGEHHFY+TF T+ GV+I LR+ Y
Sbjct: 1 MSREPLRYDRMVENALRGVVREALTEVQEDG-LPGEHHFYVTFRTDGAGVKIPDYLREQY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q QF+ L+V F LSF V ERLVIPF AI GF DPSVNF L+F
Sbjct: 60 PGEMTIVLQYQFYGLEVTPQGFSATLSFGGVHERLVIPFAAITGFADPSVNFGLKFQGAD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E + E + + + +++ +V++LD FRKK
Sbjct: 120 EEASGEDE----------------------ADGEAAAEDDTPAEESRTGTVVALDAFRKK 157
>gi|163793370|ref|ZP_02187345.1| hypothetical protein BAL199_02644 [alpha proteobacterium BAL199]
gi|159181172|gb|EDP65687.1| hypothetical protein BAL199_02644 [alpha proteobacterium BAL199]
Length = 158
Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats.
Identities = 72/180 (40%), Positives = 98/180 (54%), Gaps = 23/180 (12%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D RYD++ + ALRG+V+ L + G LPG HHFY+TF T A GV I L + Y
Sbjct: 1 MAEDLFRYDLMVENALRGVVRDALRRALNHG-LPGNHHFYLTFKTRAPGVEIPSYLIERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q Q+W+L+V D F V LSF+++ ERLV+P+ A+ GF DPSV F L+F
Sbjct: 60 PDEMTIVLQFQYWNLEVEDQRFSVMLSFNDIRERLVVPYEALTGFADPSVQFGLQFQ--- 116
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+G +G + PD D V+SLD+FRKK
Sbjct: 117 -------DGSASGSGDSDPDPTPPEGGGDAPADGG------------SGEVVSLDHFRKK 157
>gi|319408807|emb|CBI82464.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 182
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 106/181 (58%), Gaps = 3/181 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL EVA G LPG HHF+ITF+T A V+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLEVAKAG-LPGNHHFFITFSTKAPAVKISSRLKSRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV LSF + E+L+IPF +I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFRDLNVSETAFEVTLSFGEITEKLIIPFASIQVFYDPVAAFEAAFDLPA 119
Query: 145 EHIEEKLEGGNTGKVLTSPD--NFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
E+ E + +Q+ + K + + A V+SLD+FR
Sbjct: 120 NLTSEENENPESAPHTPDISLNKQKTENELIKTQNPKRDKEPSNNDTKQSADVVSLDSFR 179
Query: 203 K 203
K
Sbjct: 180 K 180
>gi|114797792|ref|YP_761633.1| hypothetical protein HNE_2955 [Hyphomonas neptunium ATCC 15444]
gi|114737966|gb|ABI76091.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 156
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 23/179 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D+I Y+ L++ A+RG+V+ L + G LPGEHHFYI+F T A GV+I L + +P
Sbjct: 1 MTDYIGYEALSQAAMRGVVREALRRGKTNGGLPGEHHFYISFRTRAPGVKIPPQLVQRFP 60
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E+MTIV+Q+Q+WDL+V + HFE+ L FS VP+ L IP AI F DPSVNF + F+
Sbjct: 61 EEMTIVVQHQYWDLEVHEGHFEIVLKFSGVPQHLSIPLAAITRFVDPSVNFGIAFE---- 116
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ K+ ++ + K +V+SLD FR+K
Sbjct: 117 -------------------SQSKDAGVIAPAPTAPIEEPAPTPKVAGETVVSLDAFRRK 156
>gi|114570591|ref|YP_757271.1| hypothetical protein Mmar10_2041 [Maricaulis maris MCS10]
gi|114341053|gb|ABI66333.1| protein of unknown function DUF1321 [Maricaulis maris MCS10]
Length = 165
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 101/180 (56%), Gaps = 15/180 (8%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D +RYD++A++ALRG+V+ L + + LPG HHFYITF T A GV I L + Y
Sbjct: 1 MAKDLMRYDLMAQDALRGVVRQALLKAGAPEGLPGPHHFYITFRTTAPGVDIDPTLLEKY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+++QFWDL V + FEV L FS VP+ L +P++AI F+DPSV F L+F+
Sbjct: 61 PEEMTIVLEHQFWDLNVTETGFEVTLKFSGVPKYLKMPYSAISRFHDPSVGFHLQFEHDG 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E F + + S S + A V+SLD+FRKK
Sbjct: 121 AEDE---------------AGFPDDDPKPKKGNKSGSGSASSGDGGDGAQVVSLDSFRKK 165
>gi|84684762|ref|ZP_01012662.1| hypothetical protein 1099457000245_RB2654_02599 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667097|gb|EAQ13567.1| hypothetical protein RB2654_02599 [Rhodobacterales bacterium
HTCC2654]
Length = 168
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 14/179 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
I Y L +A+R L++ VLS+VA G LPG HHF+ITF T V ++ L +
Sbjct: 4 NMSRSIDYGNLMHDAMRSLIRQVLSDVAENG-LPGAHHFFITFDTMHPEVELADWLSDRF 62
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE MT+V+Q+ F DL V ++ F V L+F + PER+ IPF+AI+ F DPSV F L F+
Sbjct: 63 PEDMTVVMQHWFEDLDVTEDGFAVTLNFGDNPERMYIPFDAIRTFVDPSVEFGLRFETQD 122
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ +E+ + P +++ K ++ K A V+SLD+FRK
Sbjct: 123 DDDDEEDGVADIEDAPARPVR-------------EAREADKGKSAPKDAEVVSLDSFRK 168
>gi|225627856|ref|ZP_03785893.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617861|gb|EEH14906.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 162
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 83/160 (51%), Positives = 107/160 (66%), Gaps = 1/160 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+EVA G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEVAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFELEFDV +
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFELEFDVAV 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKST 184
+ GN + + +++
Sbjct: 120 LQPASDNDEGNISPIEEMAPEKADKPKAKTRKPRRREEGK 159
>gi|254292820|ref|YP_003058843.1| hypothetical protein Hbal_0444 [Hirschia baltica ATCC 49814]
gi|254041351|gb|ACT58146.1| protein of unknown function DUF1321 [Hirschia baltica ATCC 49814]
Length = 179
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
+ + + D I Y L++ AL+G+++ L A SLPG HHFYITF T A G+ ++
Sbjct: 5 GMGSGNSEDLIGYKALSEAALKGVMREALRFAAKGESLPGGHHFYITFKTAAPGISMADA 64
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
++ +PE+MTIV+Q+Q+WDL+V D++FE+ L F VP+ LVIP+ A+ F+DPSVN+ L
Sbjct: 65 IKDRFPEEMTIVVQHQYWDLEVNDDNFEIVLKFGGVPQHLVIPYAAVTRFFDPSVNYGLV 124
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F++ + E + G + T S +K K +V+SLD
Sbjct: 125 FEMGTTALIEGGQQIEFGD----------DTTEIAEAVSEEKSDKDKSEGEAEGTVVSLD 174
Query: 200 NFRKK 204
FR+K
Sbjct: 175 AFRRK 179
>gi|84503521|ref|ZP_01001572.1| hypothetical protein OB2597_03439 [Oceanicola batsensis HTCC2597]
gi|84388011|gb|EAQ01059.1| hypothetical protein OB2597_03439 [Oceanicola batsensis HTCC2597]
Length = 167
Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 11/178 (6%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL++VA G LPG HHF+ITF T R++ LR YP
Sbjct: 1 MSRSIDYGNLMHRAMRGLIQEVLADVADNG-LPGNHHFFITFDTTHEDARLADWLRDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ F +L V D+ F + L+F + PERL IP+++I F DPSV F L F+ +
Sbjct: 60 REMTVVLQHWFDNLVVGDDGFGISLNFGDSPERLFIPYDSILTFVDPSVEFGLRFETQDQ 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + + + ++ + +++ + A V+ LD FRK
Sbjct: 120 ESEAEDAEA----------SPPLRARRDEPETEAEADAAGDEDEAQDAEVVQLDKFRK 167
>gi|121602746|ref|YP_989211.1| hypothetical protein BARBAKC583_0930 [Bartonella bacilliformis
KC583]
gi|120614923|gb|ABM45524.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 177
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDIL ++ALRG+++ VL E + G L G HHF+ITF TNA V+IS L+ Y
Sbjct: 1 MVQDQIRYDILVQDALRGVIRKVLLETSQAGPL-GNHHFFITFLTNAPEVQISDRLKNRY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+QF DL V + FEV L F +PE+LVIPF++I+ FYDP FE FD+
Sbjct: 60 PDQMTIVLQHQFKDLSVSETSFEVTLFFEEIPEKLVIPFSSIQVFYDPVAAFEAAFDLPS 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
I + E L +P Q K + + A ++SLD+FRKK
Sbjct: 120 NLISGESENSENA--LHTPTTLSNEQKEENLFTKKIDKDPSNSDTKQSADIVSLDSFRKK 177
>gi|197104332|ref|YP_002129709.1| hypothetical protein PHZ_c0866 [Phenylobacterium zucineum HLK1]
gi|196477752|gb|ACG77280.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 163
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 89/179 (49%), Gaps = 22/179 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D + Y+ LA++ALRG+VK L A+ LPG HHFYITF T+A GV +L YP
Sbjct: 7 AQDLMNYEALAQDALRGVVKAALKRAAAPEGLPGAHHFYITFKTDAAGVSGPADLLSKYP 66
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MTIV+Q+Q+WDL + F V L F P+RL IP+ A+ FYDPSV F L+F+
Sbjct: 67 DEMTIVLQHQYWDLAPGETFFSVTLQFGGQPKRLSIPYAAVTRFYDPSVQFLLQFEPP-- 124
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + K A ++SLD FRKK
Sbjct: 125 --------------------PAVQTAPAAAAPEPKAVPDAAPPAEGEAKIVSLDQFRKK 163
>gi|254438302|ref|ZP_05051796.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198253748|gb|EDY78062.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 156
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 89/174 (51%), Gaps = 25/174 (14%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +A+RGL+ VL++V + G LPG HHF+ITF T GV I+ L YP +MT
Sbjct: 8 IDYGNLMHKAMRGLILEVLTDVCAKG-LPGNHHFFITFDTMHPGVEIADWLSDRYPGEMT 66
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IVIQ+Q+ L+V D F + LSF + PE L +P++AIK F DPSV F L F+ E +
Sbjct: 67 IVIQHQYESLRVTDQGFSITLSFGDKPEPLYVPYDAIKTFVDPSVEFGLRFEAQDEDGDA 126
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ +K K A V+SLD FRK
Sbjct: 127 PEAPMDV------------------------MAEPEKDAPKKDADVVSLDQFRK 156
>gi|99081291|ref|YP_613445.1| hypothetical protein TM1040_1450 [Ruegeria sp. TM1040]
gi|99037571|gb|ABF64183.1| protein of unknown function DUF1321 [Ruegeria sp. TM1040]
Length = 159
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 66/178 (37%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL +VA G LPG HHF+ITF T+ ++ L YP
Sbjct: 1 MSRQIDYGNLMHRAMRGLIRNVLDDVAEHG-LPGAHHFFITFDTSHPDAELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ F +L V D F V L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 60 GEMTVVMQHWFDNLNVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESANE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+E + V+ D + K A V+SLD+FRK
Sbjct: 120 DDDEDMPPIE------------------VASDMQDVEEDDAPAAKKDADVVSLDSFRK 159
>gi|302383259|ref|YP_003819082.1| stringent starvation protein B [Brevundimonas subvibrioides ATCC
15264]
gi|302193887|gb|ADL01459.1| Stringent starvation protein B [Brevundimonas subvibrioides ATCC
15264]
Length = 161
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 24/184 (13%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
D D + Y+ LA++ALRG+++ L AS G +PG HHFYITF T GV + ++
Sbjct: 2 ADDAPPIDEMHYEKLAQDALRGVIRAALERAASPGGIPGAHHFYITFKTRGPGVSVPPDV 61
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
YP++MT+V+Q+Q+WDL V + F V L F +P+ L +P+ A+ FYDPSV F L+F
Sbjct: 62 VAKYPDEMTVVLQHQYWDLAVEHDLFSVMLKFGGMPKVLTVPYTAVTRFYDPSVQFLLQF 121
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
+ E V++ + K++ + + V+SLD
Sbjct: 122 EAPEPVAE------------------------PVAELPAPKRTEPSPSGDDGPKVVSLDQ 157
Query: 201 FRKK 204
FRKK
Sbjct: 158 FRKK 161
>gi|295688735|ref|YP_003592428.1| hypothetical protein Cseg_1315 [Caulobacter segnis ATCC 21756]
gi|295430638|gb|ADG09810.1| protein of unknown function DUF1321 [Caulobacter segnis ATCC 21756]
Length = 161
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 24/179 (13%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D ++Y+ +A++ALRG+V+ L + A G LP HH YITF T A GV Q+L YP
Sbjct: 7 PEDLMQYEAMAQDALRGVVRAALKKAAEPGGLPEPHHLYITFKTKAVGVSGPQDLLGKYP 66
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MTIV+Q+Q+WDL ++ F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 67 DEMTIVLQHQYWDLAPGESSFSVTLKFGGQPKRLNVPYAAVTRFYDPSVQFALQF----- 121
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + ++ + T + ++ ++SLD FRKK
Sbjct: 122 -------------------ASPEIVEDDPEPEAEPEAKTPPPSGDEGPKIVSLDQFRKK 161
>gi|83951366|ref|ZP_00960098.1| hypothetical protein ISM_12425 [Roseovarius nubinhibens ISM]
gi|83836372|gb|EAP75669.1| hypothetical protein ISM_12425 [Roseovarius nubinhibens ISM]
Length = 170
Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+R L++ VL V G LPG HHF+ITF T ++ LR YP
Sbjct: 1 MSRMIDYGKLMHAAMRRLIQDVLMGVQKDG-LPGAHHFFITFDTTHPEATMADWLRDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ + +L V D F + L+F + PE L IP++AI+ F DPSV F L F+ +
Sbjct: 60 AEMTVVVQHWYDNLNVTDEGFGITLNFGDAPENLYIPYDAIQTFVDPSVEFGLRFEQQSD 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
EE + + + D++ ++ + A V+SLD+FRK
Sbjct: 120 DDEEDEDEDDEDLLDEDGSLDDEDMEDA-------SEDRHGDAPRTEAEVVSLDSFRK 170
>gi|85374742|ref|YP_458804.1| hypothetical protein ELI_09575 [Erythrobacter litoralis HTCC2594]
gi|84787825|gb|ABC64007.1| hypothetical protein ELI_09575 [Erythrobacter litoralis HTCC2594]
Length = 195
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 106/195 (54%), Gaps = 19/195 (9%)
Query: 11 RWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFAT 69
R + + +K + I YD + +EALR +V VL E+ GS LPG HHFYITF T
Sbjct: 19 RGRGYRQLKHMTEDTPDSLIPYDEIVQEALRAVVGRVLGEIQETGSELPGSHHFYITFKT 78
Query: 70 NARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGF 129
A GV I QNLR+ +P++MTIV+QN+FWDL V D F VGLSF+ VP +L IPF AI F
Sbjct: 79 GAPGVDIPQNLRERFPDEMTIVLQNKFWDLNVTDEGFSVGLSFNQVPAQLAIPFAAITAF 138
Query: 130 YDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
DP+V+F L+F T D + + + ++ + +
Sbjct: 139 VDPAVDFGLQFQ------------------ATVADMAPEQHEDPENDEAEQGGGPAVSDS 180
Query: 190 NKMASVISLDNFRKK 204
++V+++D +KK
Sbjct: 181 EDGSNVVTVDFGKKK 195
>gi|83593540|ref|YP_427292.1| hypothetical protein Rru_A2205 [Rhodospirillum rubrum ATCC 11170]
gi|83576454|gb|ABC23005.1| Protein of unknown function DUF1321 [Rhodospirillum rubrum ATCC
11170]
Length = 196
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 65/173 (37%), Positives = 90/173 (52%), Gaps = 6/173 (3%)
Query: 32 YDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIV 91
YD + ++ALRG+++ L G LPG HHFYITF T+ GV +S LR +P+ MTIV
Sbjct: 29 YDRMVEQALRGVLREALKVTERQG-LPGAHHFYITFHTSHPGVVLSPRLRSQHPDAMTIV 87
Query: 92 IQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKL 151
+QNQFWDL V D+ F V LSF + E L IPF A+ F DP F L+F +E
Sbjct: 88 LQNQFWDLAVDDDLFSVSLSFGGIRELLTIPFEAVTAFADPHATFGLQFQGALEQD---- 143
Query: 152 EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
++ D +T+ + + +V++LD FRKK
Sbjct: 144 -DDEEDDEEDEDEDDDGIETDGPGRAAPPIDDQDDVRDGAKDNVVTLDTFRKK 195
>gi|114328472|ref|YP_745629.1| hypothetical protein GbCGDNIH1_1808 [Granulibacter bethesdensis
CGDNIH1]
gi|114316646|gb|ABI62706.1| hypothetical protein GbCGDNIH1_1808 [Granulibacter bethesdensis
CGDNIH1]
Length = 231
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 11 RWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATN 70
R + F + + YD ++ALR +V L VA+ G +P HHFYITF T+
Sbjct: 28 RVEVTFDMTDTTEQRPESLLPYDEWTEQALRQVVARALEHVANDG-MPEGHHFYITFRTD 86
Query: 71 ARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
GV I L+ YP +MTIV+Q+QFWDL V + F VGLSF V L IPF A+ GF
Sbjct: 87 YFGVSIPSRLKAQYPHEMTIVLQHQFWDLAVGPDSFSVGLSFGGVASTLRIPFAALLGFA 146
Query: 131 DPSVNFELEFDVHIEHIEE---------KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
DP V L F E +G +GK+ T P + + T S + ++
Sbjct: 147 DPHVGVGLRFQADEPGDENASEDERDDEAEDGSESGKLATFPGSAAASSTASPATAEGEQ 206
Query: 182 KSTKKQNKNKMASVISLDNFRKK 204
++ + V+SLD FR++
Sbjct: 207 ENEDSASAQSAPQVVSLDAFRRR 229
>gi|83942476|ref|ZP_00954937.1| hypothetical protein EE36_15587 [Sulfitobacter sp. EE-36]
gi|83953695|ref|ZP_00962416.1| hypothetical protein NAS141_05708 [Sulfitobacter sp. NAS-14.1]
gi|83841640|gb|EAP80809.1| hypothetical protein NAS141_05708 [Sulfitobacter sp. NAS-14.1]
gi|83846569|gb|EAP84445.1| hypothetical protein EE36_15587 [Sulfitobacter sp. EE-36]
Length = 156
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 22/178 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L +A+RGL++ VL +VA+ G LPG HHF+ITF T+ ++ L YP
Sbjct: 1 MSRSIEYGNLMHDAMRGLIRQVLLDVAANG-LPGNHHFFITFDTSHPDAELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ + L+V + F V L+F + PE + IP++AI+ F DPSV F L+F+
Sbjct: 60 GEMTVVMQHWYDKLEVTEEGFSVTLNFGDAPEPMYIPYDAIRTFVDPSVEFGLKFEQQEP 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+++ E + K A ++SLD+FRK
Sbjct: 120 GQQDEDEDLPQQDESELEVEEEAP---------------------KAAEIVSLDSFRK 156
>gi|298293049|ref|YP_003694988.1| hypothetical protein Snov_3094 [Starkeya novella DSM 506]
gi|296929560|gb|ADH90369.1| protein of unknown function DUF1321 [Starkeya novella DSM 506]
Length = 243
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/244 (34%), Positives = 114/244 (46%), Gaps = 65/244 (26%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D IRYD+L ++ALR +V+ VL++VA G LPG+HH Y++F T A GVR+S L++ Y
Sbjct: 1 MSVDLIRYDLLVQDALRSVVRRVLTDVARDG-LPGDHHLYVSFDTRASGVRLSPRLKERY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFWDL V D FEVGLSF+ +PERL IPF A+KGF+DPSV F L+F+
Sbjct: 60 PEEMTIVLQHQFWDLIVSDQFFEVGLSFNGIPERLHIPFAALKGFFDPSVKFGLQFEPVA 119
Query: 145 EHIEEK----------------------------------------LEGGNTGKVLTSPD 164
E E+ + P
Sbjct: 120 EEDEDAEDEAAAPAPVAPVTPIGEARPTSVPSTRAAARPAKEAAKLAPKTESRPAPAKPT 179
Query: 165 NFDKNQTNSVSQDSSKKKSTKKQNKNKMA------------------------SVISLDN 200
+ K +++ +K A V+ LD
Sbjct: 180 PVPAAKAEPKPVAVPKADKASEKSSDKPAAKGGEGEGKDDGKRGGQGGAQGGAQVVRLDT 239
Query: 201 FRKK 204
FRKK
Sbjct: 240 FRKK 243
>gi|126726404|ref|ZP_01742245.1| hypothetical protein RB2150_01849 [Rhodobacterales bacterium
HTCC2150]
gi|126704267|gb|EBA03359.1| hypothetical protein RB2150_01849 [Rhodobacterales bacterium
HTCC2150]
Length = 178
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 17 IIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRI 76
+I + + I Y L +A+RGLV +L +V + G LPG+HHF++TF T +GV +
Sbjct: 4 LITAKNRPNMSNQIDYARLMHDAMRGLVANLLRDVLANG-LPGDHHFFVTFNTQEKGVVM 62
Query: 77 SQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNF 136
LR+ YPE++TIVIQ+++ DL V +N F + L F P L +PF AI F DPSV F
Sbjct: 63 PDWLRERYPEEITIVIQHEYEDLGVQENGFRIVLQFGGTPVALYVPFMAISTFVDPSVEF 122
Query: 137 ELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
L+FD E+ +E +E + + + + + A ++
Sbjct: 123 GLKFDHSDENDDEIMEIVENDDNVETIPEAPMAK-----------DVVEDEAPKHDAEIV 171
Query: 197 SLDNFRK 203
SLD FRK
Sbjct: 172 SLDQFRK 178
>gi|89069092|ref|ZP_01156465.1| hypothetical protein OG2516_15244 [Oceanicola granulosus HTCC2516]
gi|89045265|gb|EAR51331.1| hypothetical protein OG2516_15244 [Oceanicola granulosus HTCC2516]
Length = 154
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/178 (38%), Positives = 89/178 (50%), Gaps = 24/178 (13%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V I+ L YP
Sbjct: 1 MRQTIDYGNLMHRAMRGLIQQVLQDVAEEG-LPGNHHFFITFDTMHPDVEIADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ F L+V D F V L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 60 GEMTVVMQHWFDGLEVTDEGFSVTLNFGDSPEPLYIPYDAIKTFVDPSVEFGLRFETQEE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E++ + +PD K A V+SLD FRK
Sbjct: 120 DDEDEEAPMDEMVEDDTPDAAP-----------------------KEAEVVSLDRFRK 154
>gi|146276774|ref|YP_001166933.1| hypothetical protein Rsph17025_0722 [Rhodobacter sphaeroides ATCC
17025]
gi|145555015|gb|ABP69628.1| protein of unknown function DUF1321 [Rhodobacter sphaeroides ATCC
17025]
Length = 153
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 91/178 (51%), Gaps = 25/178 (14%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP
Sbjct: 1 MARSIDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MT+VIQ+ + +L V D F + L+F N PE LVIPF+A++ F DPSV F L F+ H +
Sbjct: 60 QEMTVVIQHWYENLAVDDRGFSITLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRFETHED 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
EE+ + G + A V+SLD FRK
Sbjct: 120 EDEEEDTDSDEGP------------------------DGDDEPPRHDAQVVSLDKFRK 153
>gi|56552400|ref|YP_163239.1| hypothetical protein ZMO1504 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761557|ref|ZP_04759644.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753922|ref|YP_003226815.1| hypothetical protein Za10_1697 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543974|gb|AAV90128.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241373865|gb|EER63398.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258553285|gb|ACV76231.1| protein of unknown function DUF1321 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 163
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
++ I YD + +EALR +V VL V + G LPG+HHFYITF T A GV + +L
Sbjct: 1 MNEESFDSLIPYDEIVQEALRAVVGRVLGTVQAEGGLPGDHHFYITFKTQASGVSVPPHL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+PE+MTIVIQN+FWDL V +HF +GLSF +P LVIP++AI F DPSV+F L+F
Sbjct: 61 LARFPEEMTIVIQNRFWDLVVESDHFSIGLSFGGIPSNLVIPYSAITNFVDPSVHFALQF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
+ E + + E + P+ + ++V+S+D
Sbjct: 121 EAQFEEVVDSEENEPEPEKRPLPEAKPI---------------------EEGSNVVSVDF 159
Query: 201 FRKK 204
RKK
Sbjct: 160 SRKK 163
>gi|259416532|ref|ZP_05740452.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259347971|gb|EEW59748.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 160
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 91/178 (51%), Gaps = 18/178 (10%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL +VA+ G LPG HHF+ITF T+ ++ L YP
Sbjct: 1 MSRQIDYGNLMHRAMRGLIRNVLDDVAANG-LPGAHHFFITFDTSHPDAELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ F +L V D F V L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 60 GEMTVVMQHWFDNLNVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESTGE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+E L L ++ D K A V+SLD+FRK
Sbjct: 120 DDDEDLAPVEVASDLPDDEDEDDAPAA-----------------KKDADVVSLDSFRK 160
>gi|323136054|ref|ZP_08071137.1| hypothetical protein Met49242DRAFT_0524 [Methylocystis sp. ATCC
49242]
gi|322399145|gb|EFY01664.1| hypothetical protein Met49242DRAFT_0524 [Methylocystis sp. ATCC
49242]
Length = 196
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 15/195 (7%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD++ ++A+RG+++ VLS+VA G LPG+HHF I+F T+A VRIS+ L + +
Sbjct: 1 MAQDLIRYDLVVQDAMRGVMRKVLSDVAKSGYLPGDHHFTISFRTDAPDVRISRRLAEQW 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P ++TI++Q+Q+ +L+V D F V LSF ++PE L IPF A+ GF+DPSV F L F+
Sbjct: 61 PHELTIILQHQYSNLEVDDEGFGVTLSFRSIPEHLYIPFAAVTGFFDPSVEFGLRFEGAE 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN-------------- 190
+E+ E P + S + ++K + K Q +
Sbjct: 121 PEEDEEEEEEEEEAAPMRPSLVTAHHPASAAPAAAKPAAAKAQPEKTKKEEAPAEAEEAG 180
Query: 191 -KMASVISLDNFRKK 204
A VIS+D FRKK
Sbjct: 181 ESDAKVISIDAFRKK 195
>gi|300021801|ref|YP_003754412.1| hypothetical protein Hden_0266 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523622|gb|ADJ22091.1| protein of unknown function DUF1321 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 219
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 40/214 (18%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y L +EA+RG+V+ VL ++ G LPGEHHFYI+F T A G +S+ L++ YP +MT
Sbjct: 7 IDYAKLQQEAMRGVVRAVLQQIVKSG-LPGEHHFYISFLTQAPGAIVSKRLKEKYPSEMT 65
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q++FWDL V D+ FEV L+F +PERLV+PF+AIK F DPSV + L+FD + E
Sbjct: 66 IVLQHRFWDLIVSDDRFEVKLTFDGIPERLVVPFSAIKVFIDPSVRYGLQFDDDVSDNEP 125
Query: 150 KLE---------------------GGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ- 187
E T K +P ++ ++D + +
Sbjct: 126 MHEPRHAMTADATYDQIGEAGTEVPRTTPKKPRAPRKPRVADKDAAARDPAATVPPSPEP 185
Query: 188 -----------------NKNKMASVISLDNFRKK 204
++ A ++SLD FRKK
Sbjct: 186 ATRAGEVDAKDDDDATAPPSEGAKILSLDQFRKK 219
>gi|126737556|ref|ZP_01753286.1| hypothetical protein RSK20926_17982 [Roseobacter sp. SK209-2-6]
gi|126720949|gb|EBA17653.1| hypothetical protein RSK20926_17982 [Roseobacter sp. SK209-2-6]
Length = 157
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL EV G LPG HHF+ITF TN +++ L+ YP
Sbjct: 1 MSREIDYGNLMHNAMRGLIRNVLQEVVDHG-LPGNHHFFITFDTNHPDAQLADWLKDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ + +L V ++ F V L+F + PE L IP+++I+ F DPSV F L F+ E
Sbjct: 60 GEMTVVMQHWYDNLTVDEDGFGVTLNFGDAPEPLYIPYDSIETFVDPSVEFGLRFETADE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + ++ K A V+SLD+FRK
Sbjct: 120 Q--------------------AGEDEDESEEIVEEGDEAEEPKKPAEADVVSLDSFRK 157
>gi|84517087|ref|ZP_01004443.1| hypothetical protein SKA53_03504 [Loktanella vestfoldensis SKA53]
gi|84508982|gb|EAQ05443.1| hypothetical protein SKA53_03504 [Loktanella vestfoldensis SKA53]
Length = 165
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+ I Y L A+RGL++ VL VA G LPG HHF++TF T V I+ L YP +
Sbjct: 13 NTIDYGNLMHRAMRGLIQQVLENVAKTG-LPGNHHFFVTFDTMHPDVEIADWLSDRYPGE 71
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
MT+VIQ+ F +L V D F + L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 72 MTVVIQHWFANLDVTDEGFTITLNFGDNPETLYIPYDAIKTFVDPSVEFGLRFETQDE-- 129
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ K K A V+SLD FRK
Sbjct: 130 --------------------PTAITEAPMHEMAEPDDTKPAARKEAEVVSLDKFRK 165
>gi|148555628|ref|YP_001263210.1| hypothetical protein Swit_2716 [Sphingomonas wittichii RW1]
gi|148500818|gb|ABQ69072.1| protein of unknown function DUF1321 [Sphingomonas wittichii RW1]
Length = 163
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 77/179 (43%), Positives = 99/179 (55%), Gaps = 21/179 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I YD + +EALR +V VL EV G LPG+HHFYITF T +GV I ++L + +P
Sbjct: 6 PDSLIPYDEIVQEALRAVVGRVLGEVEKAGGLPGDHHFYITFKTQGQGVDIPKHLAERFP 65
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MTIVIQN+FWDLKV + FEVGLSF+ VP RLVIPF A+ GF DP+VNF L+F +
Sbjct: 66 DEMTIVIQNRFWDLKVRPDGFEVGLSFNQVPARLVIPFAAVTGFVDPAVNFALQFQAQAD 125
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E G SP ++V+S+D RKK
Sbjct: 126 DAIEDTGHSFAGNDAPSPPPAPVED---------------------GSNVVSVDFTRKK 163
>gi|254465094|ref|ZP_05078505.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206686002|gb|EDZ46484.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 155
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 23/178 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL ++A G LPG HHF+ITF T V ++ L YP
Sbjct: 1 MSREIDYGNLMHTAMRGLIRTVLQDIAENG-LPGNHHFFITFDTAHPDVELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ F +L V D F V L+F + PE L IP++AI+ F DPSV F L F+ E
Sbjct: 60 GEMTVVMQHWFDNLTVDDEGFAVTLNFGDSPEPLYIPYDAIRTFVDPSVEFGLRFESAEE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + + D + + + K A ++SLD+FRK
Sbjct: 120 DSE----------------------SYAADDDEEQDTARVPAEEKKNADIVSLDSFRK 155
>gi|126735815|ref|ZP_01751560.1| hypothetical protein RCCS2_18106 [Roseobacter sp. CCS2]
gi|126715002|gb|EBA11868.1| hypothetical protein RCCS2_18106 [Roseobacter sp. CCS2]
Length = 159
Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats.
Identities = 64/178 (35%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL++V G LPG+HHF++TF T V I+ L YP
Sbjct: 1 MTSTIDYGNLMHRAMRGLIQEVLTDVQKDG-LPGQHHFFVTFDTMHPDVEIADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+VIQ+ F +L+V + F + L+F + PE L IP++AIK F DPSV F L F+ E
Sbjct: 60 GEMTVVIQHWFDNLEVTNEGFTISLNFGDNPETLYIPYDAIKTFVDPSVEFGLRFETQDE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + + D N K A V+SLD FRK
Sbjct: 120 DEDTAMSDVEEAPMDEMVEPEDANDAP------------------KEADVVSLDQFRK 159
>gi|114767550|ref|ZP_01446304.1| hypothetical protein 1100011001349_R2601_23388 [Pelagibaca
bermudensis HTCC2601]
gi|114540403|gb|EAU43489.1| hypothetical protein R2601_23388 [Roseovarius sp. HTCC2601]
Length = 158
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 93/178 (52%), Gaps = 21/178 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL+ VL++VA G LPGEHHF+ITF T V ++ L YP
Sbjct: 1 MSGGIDYGNLMHRAMRGLIHDVLTDVAERG-LPGEHHFFITFDTQYPDVELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q++F DL+V ++ F V LSF PERL IP++AIK F DPSV F L F+ +
Sbjct: 60 GEMTVVLQHRFDDLEVGEDGFAVTLSFGEAPERLYIPYHAIKTFVDPSVEFGLRFETQED 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E+ + + P+ Q + A V+ LD+FRK
Sbjct: 120 SDEDDEDEDDPTPPEGGPERPSDGQHD--------------------AEVVRLDSFRK 157
>gi|86139918|ref|ZP_01058483.1| hypothetical protein MED193_02785 [Roseobacter sp. MED193]
gi|85823336|gb|EAQ43546.1| hypothetical protein MED193_02785 [Roseobacter sp. MED193]
Length = 158
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL +VA G LPG HHF+ITF TN +++ LR YP
Sbjct: 1 MSREIDYGNLMHSAMRGLIRTVLQDVADKG-LPGNHHFFITFDTNHPDAQLADWLRDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
MT+V+Q+ + +L+V ++ F + L+F + PE L IP++AI+ F DPSV F L F+ E
Sbjct: 60 GAMTVVMQHWYDNLEVGEDGFGITLNFGDAPEPLYIPYDAIETFVDPSVEFGLRFEAAEE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+E + + + K V+SLD+FRK
Sbjct: 120 SDDEGDDTVDHLDDEDEAADVAKRP--------------------SEGDVVSLDSFRK 157
>gi|254511476|ref|ZP_05123543.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221535187|gb|EEE38175.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 155
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 98/179 (54%), Gaps = 24/179 (13%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D I Y L A+RGL+K VL+ V+ G LPG HHF+IT T GV ++ LR+ Y
Sbjct: 1 MSQD-IDYGNLMHTAMRGLIKTVLTGVSETG-LPGAHHFFITLDTQHEGVELADWLRERY 58
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+Q+ F +L+V +N F + L+F + PE L IP+ AIK F DPSV F L F+
Sbjct: 59 PDEMTIVMQHWFENLEVGENGFAITLNFGDAPEPLYIPYLAIKTFVDPSVEFGLRFEGPE 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ E+ ++ ++ + ++ A V+SLD+FRK
Sbjct: 119 DEDED----------------------IHLTDEAPIEVDVEEPEPQHDADVVSLDSFRK 155
>gi|260433819|ref|ZP_05787790.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417647|gb|EEX10906.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 155
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 64/178 (35%), Positives = 92/178 (51%), Gaps = 25/178 (14%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL+K VL V+ G LPG HHF+ITF T GV ++ LR+ YP
Sbjct: 1 MSQGIDYGNLMHTAMRGLIKTVLQGVSETG-LPGSHHFFITFDTRTPGVELADWLRQRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MTIV+Q+ F +L V D+ F + L+F + PE L IPF+AI+ F DPSV F L F+ +
Sbjct: 60 DEMTIVVQHWFENLAVDDDGFAITLNFGDSPEPLYIPFSAIQTFVDPSVEFGLRFESPED 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + + + + + A ++SLD+FRK
Sbjct: 120 EDELE------------------------TVEDVSIEVEAEDEPQHDADIVSLDSFRK 153
>gi|254477784|ref|ZP_05091170.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214032027|gb|EEB72862.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 158
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 20/178 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL VA G LPG HHF+ITF T+ ++ L YP
Sbjct: 1 MSREIDYGNLMHSAMRGLIRSVLEGVAKDG-LPGNHHFFITFDTSHPDAELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ F +L V ++ F + L+F + PE L IP++AIK F DPSV F L F+ +
Sbjct: 60 GEMTVVMQHWFDNLNVGEDGFAITLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESPDD 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + D + + + + K A V+SLD+FRK
Sbjct: 120 DDMDDV-------------------AEDGLDDDIEIEVQEDTAEKKEADVVSLDSFRK 158
>gi|149914788|ref|ZP_01903318.1| hypothetical protein RAZWK3B_14384 [Roseobacter sp. AzwK-3b]
gi|149811581|gb|EDM71416.1| hypothetical protein RAZWK3B_14384 [Roseobacter sp. AzwK-3b]
Length = 157
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 21/178 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L +A+RGL++ VL V G LPG HHF+ITF T R++ L++ YP
Sbjct: 1 MSRSIDYGKLMHQAMRGLIQRVLVGVQDNG-LPGMHHFFITFDTKHPDARLADWLKERYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ F +L+V ++ F V L+F + PE L IP++AIK F DPSV F L F+ +
Sbjct: 60 SEMTVVMQHWFDNLEVTNDGFSVTLNFGDAPENLYIPYDAIKTFVDPSVEFGLRFETPDD 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + D + +T+ A V+SLD+FRK
Sbjct: 120 DEPSGDDPDEDDDITDGIDVPEGERTD--------------------AEVVSLDSFRK 157
>gi|330991061|ref|ZP_08315015.1| Fumarate hydratase class I [Gluconacetobacter sp. SXCC-1]
gi|329761882|gb|EGG78372.1| Fumarate hydratase class I [Gluconacetobacter sp. SXCC-1]
Length = 776
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 19 KWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQ 78
DT + + YD ++A R ++ L A G LPG+HHFY+TF T+ GV +
Sbjct: 9 NGFDTALPDSLMPYDSWIEDAYRQVMLRALEHAAEHG-LPGDHHFYLTFRTDWPGVGMPD 67
Query: 79 NLRKNYPEKMTIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNF 136
LR YP ++TIV+Q+QFWDLKV VGLSF V LVIP A+ F DP +
Sbjct: 68 RLRAQYPHEITIVLQHQFWDLKVDRARQVISVGLSFGGVASTLVIPVAAVSAFADPHIRL 127
Query: 137 ELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
L F V E + + + V + + K + V+
Sbjct: 128 ALRFSVP-----EHPPVAGGAPNVVAVQPATAHDAAPVQGGADGTDAEKDDSP----QVV 178
Query: 197 SLDNFRKK 204
SL FRKK
Sbjct: 179 SLAAFRKK 186
>gi|255264033|ref|ZP_05343375.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255106368|gb|EET49042.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 154
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 24/178 (13%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L +A+RGL++ VL++VA+ G LPG+HHF+ITF T V I+ L YP
Sbjct: 1 MSREIDYGNLMHQAMRGLIQNVLNDVAANG-LPGDHHFFITFDTMHPDVEIADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++M +V+Q+ + +L V ++ F V L+F + PE L IP++AIK F DPSV F L F+ +
Sbjct: 60 DEMMVVMQHWYDNLDVTNDGFSVTLNFGDTPEPLYIPYDAIKTFVDPSVEFGLRFESQDD 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ ++ E V + + A ++SLD+FRK
Sbjct: 120 ELPDEHEAPMDEMV-----------------------EEPDDDAPQEAEIVSLDSFRK 154
>gi|144897726|emb|CAM74590.1| protein containing DUF1321 [Magnetospirillum gryphiswaldense MSR-1]
Length = 163
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D +RYD + ++ALRG+V+ L+ A G L G+HHFYITF T G+ + ++ +
Sbjct: 1 MSEDTLRYDKMVEDALRGVVREALTITARDG-LFGDHHFYITFRTRFPGIGMGDHILARH 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PE+MTIV+Q+QFW L+V + F V LSFS E L++PF A+ GF DPS F L+F
Sbjct: 60 PEEMTIVLQHQFWGLEVDETFFRVTLSFSGKSETLIVPFAAVTGFADPSAKFGLQFQAMD 119
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+++ E + ++ VI+LD FRKK
Sbjct: 120 GDDDDEAEDEAVEAEAEETAATPVTDIPADAE----------------GKVIALDAFRKK 163
>gi|163746402|ref|ZP_02153760.1| hypothetical protein OIHEL45_13395 [Oceanibulbus indolifex HEL-45]
gi|161380287|gb|EDQ04698.1| hypothetical protein OIHEL45_13395 [Oceanibulbus indolifex HEL-45]
Length = 159
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 19/178 (10%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L EA+RGL++ VL +++ G LPG HHF+ITF T+ ++ L YP
Sbjct: 1 MSRSIDYGNLMHEAMRGLIRKVLQDISDNG-LPGNHHFFITFDTSHPDAELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ + L V + F + L+F + PE L IP++AI+ F DPSV F L F+
Sbjct: 60 GEMTVVMQHWYDGLDVTPDGFAITLNFGDAPEPLYIPYDAIRTFVDPSVEFGLRFEQQES 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E+ NT + + +K A ++SLD+FRK
Sbjct: 120 EEEDDDSEENTLDQTDE------------------DELEVAEEPSKDAEIVSLDSFRK 159
>gi|329849449|ref|ZP_08264295.1| hypothetical protein ABI_23420 [Asticcacaulis biprosthecum C19]
gi|328841360|gb|EGF90930.1| hypothetical protein ABI_23420 [Asticcacaulis biprosthecum C19]
Length = 181
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D ++ D + Y L + ALRG+++ L AS LPGEHHFY+TF T GV + ++L
Sbjct: 3 DDQISSDLMDYASLTQNALRGVIRQALQRAASPQGLPGEHHFYVTFLTRGSGVSVPEDLL 62
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
YP +TIV+Q+Q+ DL+V D+ F V L+F P+ L +P+ AI F+DP F LEF+
Sbjct: 63 ARYPYDITIVLQHQYRDLRVADDFFRVTLTFGGAPKVLTVPYAAITRFHDPFAQFMLEFE 122
Query: 142 VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
V + S S + +K+ VISLD+F
Sbjct: 123 VEDSRALTQDTDPADMLDDGSEPEVAAPDLASPAASEAKETEAPDDAPK----VISLDHF 178
Query: 202 RKK 204
RKK
Sbjct: 179 RKK 181
>gi|260577107|ref|ZP_05845085.1| protein of unknown function DUF1321 [Rhodobacter sp. SW2]
gi|259020685|gb|EEW24003.1| protein of unknown function DUF1321 [Rhodobacter sp. SW2]
Length = 154
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 92/178 (51%), Gaps = 24/178 (13%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL++VA G LPG HHF+ITF T V+I++ L YP
Sbjct: 1 MTQSIDYGNLMHRAMRGLIQSVLADVARDG-LPGAHHFFITFDTTHPDVQIAKWLHDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+VIQ+ F DL V D F + L+F N PE LVIPF+++ F DPSV F L F+ +
Sbjct: 60 AEMTVVIQHWFEDLIVTDKGFSITLNFGNQPEPLVIPFDSLLTFVDPSVEFGLRFEPQGD 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+++ E G+ P+ A V+SLD FRK
Sbjct: 120 AEDDEDEAGDIDDDDDEPEAKPHA-----------------------AEVVSLDKFRK 154
>gi|294678349|ref|YP_003578964.1| hypothetical protein RCAP_rcc02828 [Rhodobacter capsulatus SB 1003]
gi|294477169|gb|ADE86557.1| protein of unknown function DUF1321 [Rhodobacter capsulatus SB
1003]
Length = 153
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 69/178 (38%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL+EVA G LPG HHF+ITF T A V ++ L+ YP
Sbjct: 1 MTRSIDYGTLMHRAMRGLIQTVLTEVAEHG-LPGAHHFFITFDTRAPKVEMADWLKSRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E+MTIVIQ+ F +L V D F + L+F N PE LVIPF+A+ F DPSV F L F+
Sbjct: 60 EEMTIVIQHWFDNLVVTDEGFSITLNFGNQPEPLVIPFDAVHTFVDPSVEFGLRFESQDS 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E++ E + A V+SLD FRK
Sbjct: 120 DEEDEDEDDEDEPQEEP------------------------EKPRTEAEVVSLDKFRK 153
>gi|149185605|ref|ZP_01863921.1| hypothetical protein ED21_21309 [Erythrobacter sp. SD-21]
gi|148830825|gb|EDL49260.1| hypothetical protein ED21_21309 [Erythrobacter sp. SD-21]
Length = 178
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 20/185 (10%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQ 78
+ I YD + +EALR +V VL E+ GS LPG HHFYITF T+A GV I
Sbjct: 12 GMSDDTPDSLIPYDTIVQEALRAVVGRVLGEIEQGGSELPGTHHFYITFKTHAPGVSIPA 71
Query: 79 NLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFEL 138
+L + +P++MTIV+QN+FWDL V ++ F VGLSF+ +P L IP+ AI F DP+V+F L
Sbjct: 72 HLSERFPDEMTIVLQNKFWDLNVREDGFSVGLSFNQIPAELDIPYAAITQFVDPAVDFGL 131
Query: 139 EFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISL 198
+F + + T+ D + +S + ++V+++
Sbjct: 132 QFQ-------------------ATVADMAPAPTDEAGNDEEQAESPPVEGAEDGSNVVTV 172
Query: 199 DNFRK 203
D RK
Sbjct: 173 DFGRK 177
>gi|56696782|ref|YP_167143.1| hypothetical protein SPO1907 [Ruegeria pomeroyi DSS-3]
gi|56678519|gb|AAV95185.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 151
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 29/179 (16%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M+ D I Y L A+RGL+K VL++VA G LPG HHF+ITF T GV+++ L Y
Sbjct: 1 MSRD-IDYGNLMHTAMRGLIKTVLADVAQHG-LPGAHHFFITFDTRYEGVQLADWLADRY 58
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P +MTIV+Q+ + +L V ++ F + L+F + PE L IP++AI+ F DPSV F L F+
Sbjct: 59 PGEMTIVMQHWYENLDVGEDGFAITLNFGDSPEPLYIPYDAIRTFVDPSVEFGLRFESPD 118
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+++ + + A V+SLD+FRK
Sbjct: 119 FDEDDEDDIEVEEEPDA---------------------------PKPDAEVVSLDSFRK 150
>gi|329889829|ref|ZP_08268172.1| hypothetical protein BDIM_15200 [Brevundimonas diminuta ATCC 11568]
gi|328845130|gb|EGF94694.1| hypothetical protein BDIM_15200 [Brevundimonas diminuta ATCC 11568]
Length = 155
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 20/175 (11%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y+ LA++ALRG++++ L A +PG HHFYITF T GV + ++ YP++MT
Sbjct: 1 MHYEQLAQDALRGVIRLALERAAEPEGIPGAHHFYITFKTRGAGVSVPPDVLAKYPDEMT 60
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
+V+Q+Q+WDL V + F V L F P+ L +P++A+ FYDPSV F L+FD
Sbjct: 61 VVLQHQYWDLAVEPDLFSVMLKFGGAPKVLTVPYSAVVRFYDPSVQFLLQFD-------- 112
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
P+ + + + + + V+SLD FRKK
Sbjct: 113 ------------EPEIVEAEIAPLSPPARDPDAAPPQPSDDDGPKVVSLDQFRKK 155
>gi|315498760|ref|YP_004087564.1| stringent starvation protein b [Asticcacaulis excentricus CB 48]
gi|315416772|gb|ADU13413.1| Stringent starvation protein B [Asticcacaulis excentricus CB 48]
Length = 171
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
DT DH+ Y L + ALRG+++ L + + LPG+HHFY+TF T A GV I +L
Sbjct: 3 DTPSVIDHMDYATLTQNALRGVIREALIKASHPHGLPGDHHFYVTFLTRAEGVTIPDDLL 62
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
K YP +TIV+Q+Q+ +LKV + V LSF VP+ L P +AI FYDPSV F LEFD
Sbjct: 63 KRYPRDITIVLQHQYRELKVDGDRISVTLSFGGVPKVLRFPLSAITRFYDPSVQFILEFD 122
Query: 142 VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
V EG + + D K + V+SLD F
Sbjct: 123 VEEPLEANDDEGLIAEP--------------AAATDEGKPADPDTPPPDTGPKVVSLDQF 168
Query: 202 RKK 204
RKK
Sbjct: 169 RKK 171
>gi|304321360|ref|YP_003855003.1| hypothetical protein PB2503_09039 [Parvularcula bermudensis
HTCC2503]
gi|303300262|gb|ADM09861.1| hypothetical protein PB2503_09039 [Parvularcula bermudensis
HTCC2503]
Length = 186
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 25 MNYD--HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRK 82
M D + Y L ALR +V+ VLS ++G PGEHHFYI F TNA+GV +S LR+
Sbjct: 1 MADDDSELDYTFLELAALRNVVRDVLSITETLGHPPGEHHFYIGFLTNAKGVEMSDTLRE 60
Query: 83 NYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
YPE+M IV+Q+QF L+V + FEV L F VP+RL+IPF+AI F DPSVN+ +F V
Sbjct: 61 QYPERMVIVLQHQFEGLRVYADRFEVTLHFKGVPDRLIIPFDAIAEFADPSVNYSRQFPV 120
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSV----SQDSSKKKSTKKQNKNKMASVISL 198
IE + E T + P +++ + D ++ A ++S+
Sbjct: 121 AIEVLGETDTAAPTVQGSVEPFTPRGDKSRPAHRDDNDDDGPDDDGPSGPQSGSADIVSI 180
Query: 199 DNFRKK 204
D FRKK
Sbjct: 181 DRFRKK 186
>gi|77462689|ref|YP_352193.1| hypothetical protein RSP_2139 [Rhodobacter sphaeroides 2.4.1]
gi|126461582|ref|YP_001042696.1| hypothetical protein Rsph17029_0813 [Rhodobacter sphaeroides ATCC
17029]
gi|332557572|ref|ZP_08411894.1| hypothetical protein RSWS8N_00935 [Rhodobacter sphaeroides WS8N]
gi|77387107|gb|ABA78292.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|126103246|gb|ABN75924.1| protein of unknown function DUF1321 [Rhodobacter sphaeroides ATCC
17029]
gi|332275284|gb|EGJ20599.1| hypothetical protein RSWS8N_00935 [Rhodobacter sphaeroides WS8N]
Length = 152
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 91/178 (51%), Gaps = 26/178 (14%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP
Sbjct: 1 MARSIDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MT+VIQ+ + +L D+ F V L+F N PE LVIPF+A++ F DPSV F L F+ H E
Sbjct: 60 QEMTVVIQHWYENLSADDHGFSVTLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRFETHEE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
EE+ G P D A V+SLD FRK
Sbjct: 120 DEEEETGGDEDPDGDDEPPRHD-------------------------AQVVSLDKFRK 152
>gi|114768944|ref|ZP_01446570.1| hypothetical protein OM2255_04420 [alpha proteobacterium HTCC2255]
gi|114549861|gb|EAU52742.1| hypothetical protein OM2255_04420 [alpha proteobacterium HTCC2255]
Length = 156
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 99/179 (55%), Gaps = 23/179 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D I Y + ++A++ L+ VL +++ G LPG HH++I+F T GV ++ +++ YP
Sbjct: 1 MTDTINYAQMMQKAMQSLMIDVLKKISKNG-LPGNHHYFISFDTKFEGVVVADWIKERYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E+MTIVIQ+ F +L+V ++F + L+F + PE L IP+N+I F DPSV F L F+
Sbjct: 60 EEMTIVIQHWFDNLEVNADNFSITLNFGDNPENLTIPWNSISTFVDPSVEFGLRFEDEAN 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ +E K++ + ++N +A ++SLD+FRKK
Sbjct: 120 EDIDAVEEIPESKMVII----------------------EDDDENNVAEIVSLDSFRKK 156
>gi|85702989|ref|ZP_01034093.1| hypothetical protein ROS217_19647 [Roseovarius sp. 217]
gi|85671917|gb|EAQ26774.1| hypothetical protein ROS217_19647 [Roseovarius sp. 217]
Length = 163
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 27/180 (15%)
Query: 24 LMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKN 83
I Y L A+RGL++ VLS+V S G LPG HHF+ITF T +++ L++
Sbjct: 10 SNMSRSIDYGNLMHRAMRGLIQEVLSKVQSEG-LPGAHHFFITFDTKHPEAKLANWLKQR 68
Query: 84 YPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH 143
YP +MT+V+Q+ + DLKV ++ F V L+F + PERL +P++AI+ F DPSV F L F+
Sbjct: 69 YPSEMTVVMQHWYDDLKVTNDGFAVTLNFGDAPERLYVPYDAIQTFVDPSVEFGLRFETQ 128
Query: 144 IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E+ A V+SLD+FRK
Sbjct: 129 EVDEEDDDLDDTEPPDDDP--------------------------SPNKAEVVSLDSFRK 162
>gi|326388385|ref|ZP_08209981.1| hypothetical protein Y88_3268 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207117|gb|EGD57938.1| hypothetical protein Y88_3268 [Novosphingobium nitrogenifigens DSM
19370]
Length = 161
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 73/180 (40%), Positives = 97/180 (53%), Gaps = 24/180 (13%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLRKNY 84
I YD + +EALR +V VL +V + GS LPG HHFYITF T A GV I LR+ +
Sbjct: 5 PDSLIPYDEIVQEALRAVVGRVLGQVEASGSVLPGNHHFYITFKTGAPGVSIPDRLRERF 64
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
P++MTIV+QN+FWDL V D F VGLSFS +P LVIPF+AI F DP+V+F L+F
Sbjct: 65 PDEMTIVLQNKFWDLNVTDTGFTVGLSFSQIPATLVIPFSAITAFVDPAVDFGLQFQAIG 124
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ +E E + D ++V+++D RKK
Sbjct: 125 DLDDELHEAAENDVPESPVTTAD-----------------------DGSNVVTVDFGRKK 161
>gi|307945916|ref|ZP_07661252.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307771789|gb|EFO31014.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 158
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 74/120 (61%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Query: 23 TLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRK 82
M D +RYDIL ++ALRG VK +LSEV G LPGEHHFYI F T A GVRIS L++
Sbjct: 7 EQMAEDLLRYDILIQDALRGAVKKILSEVGRTG-LPGEHHFYIAFETTAPGVRISSRLKE 65
Query: 83 NYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDV 142
YP++MTIV+Q+QFWDL + ++ FEVGLSF VPE+L++P++AIKGF+DPSV F LEFD
Sbjct: 66 RYPQEMTIVLQHQFWDLAIGEHAFEVGLSFGGVPEKLLVPYSAIKGFFDPSVQFALEFDP 125
>gi|167647321|ref|YP_001684984.1| hypothetical protein Caul_3359 [Caulobacter sp. K31]
gi|167349751|gb|ABZ72486.1| protein of unknown function DUF1321 [Caulobacter sp. K31]
Length = 161
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 24/179 (13%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+L YP
Sbjct: 7 PEDLMQYEAMAQDALRGVVKAALRKAAAPGGLPEPHHLYITFKTQAAGVSGPQDLLGKYP 66
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MTI++Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 67 DEMTIILQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAAVTRFYDPSVQFALQF----- 121
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + + + S + + +ISLD FRKK
Sbjct: 122 -------------------EAPEIAPPAPEPEPEPELSAPTEGGDDAPKIISLDQFRKK 161
>gi|296283283|ref|ZP_06861281.1| hypothetical protein CbatJ_06661 [Citromicrobium bathyomarinum
JL354]
Length = 170
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQN 79
+ I YD + +EALR +V VL E+ + G LPG HHFYITF T GV I +
Sbjct: 1 MSDDAPDSLIPYDQIVQEALRAVVGSVLGEIEAGGGTLPGNHHFYITFKTGVPGVEIPDH 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
LR+ +P++MTIV+QN+FWDL V + F VGLSF+ LV+PF+AI F DP+V+F L+
Sbjct: 61 LRERFPDEMTIVLQNKFWDLNVTEVGFSVGLSFNQRSSHLVVPFSAITAFVDPAVDFGLQ 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F N S D+ + ++V+++D
Sbjct: 121 FQATEVEDY---------------PTPTDAAGNDGSDDAERDPREAVTKNEDGSNVVTVD 165
Query: 200 NFRKK 204
RKK
Sbjct: 166 FGRKK 170
>gi|221638549|ref|YP_002524811.1| hypothetical protein RSKD131_0450 [Rhodobacter sphaeroides KD131]
gi|221159330|gb|ACM00310.1| Hypothetical Protein RSKD131_0450 [Rhodobacter sphaeroides KD131]
Length = 153
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 69/178 (38%), Positives = 90/178 (50%), Gaps = 25/178 (14%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL +VA G LPG HHF+ITF T V ++ LR YP
Sbjct: 1 MARSIDYGNLMHRAMRGLIQSVLEDVAEHG-LPGAHHFFITFDTTHPDVAMADWLRARYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MT+VIQ+ + +L D+ F V L+F N PE LVIPF+A++ F DPSV F L F+ H E
Sbjct: 60 QEMTVVIQHWYENLSADDHGFSVTLNFGNQPEPLVIPFDAVRTFVDPSVEFGLRFETHEE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
EE GG+ A V+SLD FRK
Sbjct: 120 EDEEGETGGDEDPDGDDEPP------------------------RHDAQVVSLDKFRK 153
>gi|163736230|ref|ZP_02143649.1| hypothetical protein RGBS107_13901 [Phaeobacter gallaeciensis
BS107]
gi|163741242|ref|ZP_02148634.1| hypothetical protein RG210_17320 [Phaeobacter gallaeciensis 2.10]
gi|161385595|gb|EDQ09972.1| hypothetical protein RG210_17320 [Phaeobacter gallaeciensis 2.10]
gi|161390100|gb|EDQ14450.1| hypothetical protein RGBS107_13901 [Phaeobacter gallaeciensis
BS107]
Length = 158
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 20/178 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL++ VL VA G LPG HHF+ITF T+ ++ L YP
Sbjct: 1 MSREIDYGNLMHSAMRGLIRSVLDGVAEHG-LPGNHHFFITFDTSHPDAELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ F +L V ++ F + L+F + PE L IP++AIK F DPSV F L F+ +
Sbjct: 60 GEMTVVMQHWFDNLDVGEDGFAITLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFESPED 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + D + + + K A V+SLD+FRK
Sbjct: 120 DEEVEEMVAEL-------------------DDDIEIEVDEDPADKKPADVVSLDSFRK 158
>gi|256113952|ref|ZP_05454740.1| hypothetical protein Bmelb3E_14330 [Brucella melitensis bv. 3 str.
Ether]
gi|265995299|ref|ZP_06107856.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262766412|gb|EEZ12201.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 112
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 75/113 (66%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYDILA+EALRG+++ VL+E A G LPG HHF+ITF T A GVRIS L++ Y
Sbjct: 1 MVQDLIRYDILAQEALRGVIRKVLAEAAKAG-LPGNHHFFITFLTGAPGVRISSRLKEKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFE 137
PE+MTIV+Q+QFWD+ V D FEVGLSF ++PE+L IPF+AI+GFYDPSVNFE
Sbjct: 60 PEQMTIVLQHQFWDMHVTDQLFEVGLSFGDIPEKLTIPFSAIRGFYDPSVNFE 112
>gi|296114517|ref|ZP_06833170.1| hypothetical protein GXY_02026 [Gluconacetobacter hansenii ATCC
23769]
gi|295978873|gb|EFG85598.1| hypothetical protein GXY_02026 [Gluconacetobacter hansenii ATCC
23769]
Length = 205
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 19 KWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQ 78
+T + + YD ++A R ++ V + G LPG+HHFY+TF T+ GV + +
Sbjct: 9 NGFETSIPDSLLPYDDWIEDAYRDVMLRAFEYVVTEGGLPGDHHFYLTFRTDWPGVEMPE 68
Query: 79 NLRKNYPEKMTIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNF 136
+R YP ++TIV+Q+QF LKV V L+F VP LVIP AI F DPSV
Sbjct: 69 RVRAQYPHEITIVLQHQFHGLKVDRAAGTISVSLAFGGVPATLVIPVAAISAFADPSVKL 128
Query: 137 ELEFDVHIEHIEEKLEGGNTGKVLTS-----PDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
L F V EH + V P Q ++ ++ +
Sbjct: 129 PLSFRVP-EHPPQPAPSAEIHNVFGQGQGQGPRAPQPEQEAHAPGAQDATPTSAEETQPS 187
Query: 192 MASVISLDNFRKK 204
V+SL FRK+
Sbjct: 188 SPQVVSLAAFRKR 200
>gi|254419893|ref|ZP_05033617.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196186070|gb|EDX81046.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 156
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 66/183 (36%), Positives = 91/183 (49%), Gaps = 29/183 (15%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
D D ++Y+ LA EALRG+++ L V + G LPG HHFYITF T A GV I ++
Sbjct: 3 DQTPPVDEMQYERLAHEALRGVIRSALDHVLAEG-LPGAHHFYITFKTRAAGVSIPPDML 61
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
YP++MT+V+Q+Q+ DL+V + F V L F VP L +P++A+ FYDPSV F L+FD
Sbjct: 62 AKYPDEMTVVLQHQYEDLQVEADRFSVKLRFGGVPRTLAMPYSAVTRFYDPSVQFLLQFD 121
Query: 142 VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
+ V + V+SLD F
Sbjct: 122 ----------------------------EPEIVEAVEEATPPEDPTPGSDGPKVVSLDQF 153
Query: 202 RKK 204
RKK
Sbjct: 154 RKK 156
>gi|110679541|ref|YP_682548.1| hypothetical protein RD1_2277 [Roseobacter denitrificans OCh 114]
gi|109455657|gb|ABG31862.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 135
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L EA+RGL++ VL +V G LPGEHHF+ITF T ++ L YP
Sbjct: 1 MTRTIDYGNLMHEAMRGLIRKVLLDVCDHG-LPGEHHFFITFDTGHPDAELADWLFDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q+ + +L+V D F V L+F + PE L IP++AIK F DPSV F L F+ +
Sbjct: 60 GEMTVVMQHWYDNLEVTDEGFSVTLNFGDAPEPLYIPYDAIKTFVDPSVEFGLRFETQHD 119
Query: 146 HIEEKLEGG 154
EE
Sbjct: 120 EDEEAAPAQ 128
>gi|87199027|ref|YP_496284.1| hypothetical protein Saro_1005 [Novosphingobium aromaticivorans DSM
12444]
gi|87134708|gb|ABD25450.1| protein of unknown function DUF1321 [Novosphingobium
aromaticivorans DSM 12444]
Length = 166
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 19/183 (10%)
Query: 23 TLMNYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQNLR 81
+ I YD + +EALR +V VL +V S G LPG HHFYITF T A GV I Q LR
Sbjct: 2 SDTPDSLIPYDEIVQEALRAVVGRVLGQVESAGGVLPGTHHFYITFKTGAPGVDIPQRLR 61
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFD 141
+ +P++MTIV+QN+FWDLKV ++ F VGLSF+ +P L+IPF+AI F DP+V+F L+F
Sbjct: 62 ERFPDEMTIVLQNKFWDLKVEEDRFTVGLSFNQIPSTLLIPFSAITAFVDPAVDFGLQFQ 121
Query: 142 VHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNF 201
++ E + + + + + + + ++V+++D
Sbjct: 122 AVVDDDEVE------------------PLEPAENDSPEQAERPAVERSDDGSNVVTVDFG 163
Query: 202 RKK 204
+KK
Sbjct: 164 KKK 166
>gi|315122503|ref|YP_004062992.1| hypothetical protein CKC_03775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495905|gb|ADR52504.1| hypothetical protein CKC_03775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 172
Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 120/165 (72%), Positives = 136/165 (82%), Gaps = 1/165 (0%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
MN+DHIRYDIL KEALRGLVK VL+E A+IGSLPG+HHFYITFATNARGVRISQN++K Y
Sbjct: 1 MNHDHIRYDILTKEALRGLVKTVLAETAAIGSLPGDHHFYITFATNARGVRISQNIKKIY 60
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
PEK+TIVIQNQFWDLKV DNHFEVGLSFSNVPE L IPFNAI+GFYDPSVNFELEFDVH+
Sbjct: 61 PEKITIVIQNQFWDLKVFDNHFEVGLSFSNVPELLSIPFNAIQGFYDPSVNFELEFDVHL 120
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
EE+LE G+VL P+NF+K+Q+ + KKQ K
Sbjct: 121 YDAEEELENKK-GEVLGLPENFNKDQSPDSLEKLPTDNKEKKQKK 164
>gi|332187812|ref|ZP_08389546.1| hypothetical protein SUS17_2911 [Sphingomonas sp. S17]
gi|332012162|gb|EGI54233.1| hypothetical protein SUS17_2911 [Sphingomonas sp. S17]
Length = 161
Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 75/184 (40%), Positives = 101/184 (54%), Gaps = 23/184 (12%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+ + I YD + +EALR +V VL VA G LPG HHFYITF T A GV I Q L
Sbjct: 1 MTEGLPDSLIPYDDIVQEALRAVVGRVLGPVAETGHLPGTHHFYITFKTQAPGVDIPQRL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+ +P++MTIV+QN+FWDL V +N F VGLSF+ VP +LVIP++AI F+DP V FEL F
Sbjct: 61 IERFPDEMTIVLQNRFWDLTVDENRFSVGLSFNQVPSKLVIPYSAITRFHDPEVQFELGF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
V D Q + DS++ + ++V+++D
Sbjct: 121 HV-----------------------ADDPQGDPDPHDSAENDEPVAKPVEDGSNVVAVDF 157
Query: 201 FRKK 204
RKK
Sbjct: 158 KRKK 161
>gi|254460264|ref|ZP_05073680.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206676853|gb|EDZ41340.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 154
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
A+RGL+K VL +V G LPGEHHF+ITF T V+I+ LR+ YP +MT+V+Q+
Sbjct: 1 MHTAMRGLIKKVLLDVKDQG-LPGEHHFFITFDTTHPDVQIADWLRERYPAEMTVVVQHW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
F +L + D+ F + L+F + PE L IPF+A++ F DPSV F L F
Sbjct: 60 FDNLDIRDDGFSITLNFGDAPEPLNIPFDALRTFVDPSVEFGLRF-------------EA 106
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
P +Q ++ + ++ K A ++SLD FRK
Sbjct: 107 DEDDEEEPALHSVDQEAPETEPAEIMLVDEEDAPKKDAEIVSLDAFRK 154
>gi|89054882|ref|YP_510333.1| hypothetical protein Jann_2391 [Jannaschia sp. CCS1]
gi|88864431|gb|ABD55308.1| protein of unknown function DUF1321 [Jannaschia sp. CCS1]
Length = 162
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 27 YDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPE 86
I Y L EA+ G+++ VL VA G LPGEHHF+ITF T V ++ LR+ YPE
Sbjct: 5 TTTIPYGRLMHEAVCGVIRDVLDGVAKSG-LPGEHHFFITFDTQHADVDLADWLRERYPE 63
Query: 87 KMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
+M IVIQN + DL+V ++ F + L+F + PERL IPF++I F DPSV F F+ +
Sbjct: 64 EMMIVIQNWYDDLQVDNDGFSITLNFGDAPERLRIPFDSIATFVDPSVEFGWRFEQTEDD 123
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ G + + D ++ + A V+SLD FR+
Sbjct: 124 DDPTPPDGPDAPDDDADSDDDGSE--------------------REAEVVSLDTFRR 160
>gi|260428183|ref|ZP_05782162.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260422675|gb|EEX15926.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 157
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 92/178 (51%), Gaps = 22/178 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y L A+RGL+ VL++V + G LPGEHHF+ITF T V ++ L YP
Sbjct: 1 MSGGIDYGNLMHRAMRGLIHDVLTDVMNRG-LPGEHHFFITFDTQHPDVELADWLSDRYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+MT+V+Q++F DL+V + F V LSF PERL IP++AIK F DPSV F L F+ H E
Sbjct: 60 GEMTVVLQHRFDDLEVTEEGFAVTLSFGEAPERLYIPYDAIKTFVDPSVEFGLRFETHEE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+++ + P + + Q A V+ LD FRK
Sbjct: 120 EDDDEDDPTPPDGGPDGPGDREPQQ---------------------DAEVVRLDAFRK 156
>gi|103488625|ref|YP_618186.1| hypothetical protein Sala_3150 [Sphingopyxis alaskensis RB2256]
gi|98978702|gb|ABF54853.1| protein of unknown function DUF1321 [Sphingopyxis alaskensis
RB2256]
Length = 160
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 67/150 (44%), Positives = 88/150 (58%), Gaps = 4/150 (2%)
Query: 25 MNYD----HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
M+ D I YD + ++ALR +V VLS+V SLPGEHHFYITF T A GV I +L
Sbjct: 1 MSDDVRDSLIPYDEIVQDALRAVVGRVLSQVEGTDSLPGEHHFYITFKTQAPGVDIPAHL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+P++MTIV+QN+FWDL V ++HF VGLSF+ P L+IP+ AI F DPSV+F L+F
Sbjct: 61 VAKFPDEMTIVLQNRFWDLTVEEDHFSVGLSFNQTPSTLIIPYAAITAFVDPSVDFGLQF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQ 170
V + E D +
Sbjct: 121 QVSDDGAAEPEPHDEADNDRPEVSTEDGSN 150
>gi|254487335|ref|ZP_05100540.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214044204|gb|EEB84842.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 144
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 24/168 (14%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
+A+RGL++ VL +VA+ G LPG HHF+ITF T ++ L YP +MT+V+Q+
Sbjct: 1 MHDAMRGLIRQVLLDVAANG-LPGNHHFFITFDTEHPDAELADWLSDRYPGEMTVVMQHW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
+ L+V + F V L+F + PE L IP++AI+ F DPSV F L+F+ ++
Sbjct: 60 YDKLEVTEEGFSVTLNFGDAPEPLYIPYDAIRTFVDPSVEFGLKFEQQDSGSGDRALEQK 119
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
L + K A ++SLD+FRK
Sbjct: 120 EESELEVAEEAP-----------------------KAAEIVSLDSFRK 144
>gi|294084291|ref|YP_003551049.1| hypothetical protein SAR116_0722 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663864|gb|ADE38965.1| hypothetical protein SAR116_0722 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 163
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 24/175 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
+ Y++L ++ALR +V+ L G LPG+ HFYI+F T+ GV ++ +L+ +P+ MT
Sbjct: 11 LNYELLVEDALRSVVRGSLLIAQKAG-LPGDTHFYISFKTDYPGVELADDLKIKHPDIMT 69
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+Q+ DL+V D+ F V L F P +++PF ++ GF DPSV F L+F E E+
Sbjct: 70 IVLQHQYADLEVDDDSFSVTLFFGGKPSPMIVPFASVTGFNDPSVGFGLQFGTLDEDNED 129
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
D S + + + A V+SLD FR +
Sbjct: 130 -----------------------LGDSDQSSPDAKAENGEETTADVVSLDTFRNR 161
>gi|85710735|ref|ZP_01041799.1| hypothetical protein NAP1_09997 [Erythrobacter sp. NAP1]
gi|85687913|gb|EAQ27918.1| hypothetical protein NAP1_09997 [Erythrobacter sp. NAP1]
Length = 166
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGS-LPGEHHFYITFATNARGVRISQN 79
+ I YD + +EALR +V VL E+ GS LPG HHFYITF T A GV I +
Sbjct: 1 MTEDTPDSLIPYDEIVQEALRAVVGRVLGEIERGGSELPGNHHFYITFKTGASGVSIPAH 60
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
LR+ +P++MTIV+QN+FWDL+V ++ F VGLSF+ +P +L IPF AI F DP+V+F L+
Sbjct: 61 LRERFPDEMTIVLQNKFWDLEVREDGFTVGLSFNQIPAKLEIPFAAITAFVDPAVDFGLQ 120
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F S + D+ + ++V+++D
Sbjct: 121 FQ-------------------ASVSELAPEEHEDAENDAEVLVQGDPDDGGDGSNVVTVD 161
Query: 200 NFRKK 204
RKK
Sbjct: 162 FGRKK 166
>gi|119384644|ref|YP_915700.1| hypothetical protein Pden_1909 [Paracoccus denitrificans PD1222]
gi|119374411|gb|ABL70004.1| protein of unknown function DUF1321 [Paracoccus denitrificans
PD1222]
Length = 153
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 64/178 (35%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
I Y + A++ L+ VL VA G LPGEHHF+ITF T V ++ LR+ YP
Sbjct: 1 MARGIDYGGMMHRAMQRLIAEVLETVAEEG-LPGEHHFFITFDTRDSDVEMADWLRERYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E+MTIVIQ+ F +L V F + L+F N PE L IPF+A++ F DPSV F L F+ H E
Sbjct: 60 EEMTIVIQHWFENLSVTPEGFHITLNFGNSPEPLYIPFDALRTFVDPSVEFGLRFENHEE 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+E + + A V+SLD +RK
Sbjct: 120 DEDEPEAEEDEPQEPGE------------------------DGPKGSAEVVSLDKWRK 153
>gi|58039869|ref|YP_191833.1| hypothetical protein GOX1426 [Gluconobacter oxydans 621H]
gi|58002283|gb|AAW61177.1| Hypothetical protein GOX1426 [Gluconobacter oxydans 621H]
Length = 191
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
+ + + YD ++A R ++ + VA+ G LPG HHFY+TF TN V I
Sbjct: 11 GFEHELPESLLPYDDWVEDAYREVMLRAIEHVAAEG-LPGAHHFYLTFRTNRPDVIIPAR 69
Query: 80 LRKNYPEKMTIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFE 137
LR YPE+MTIV+Q+QFWDL + N VGLSF V L IP NAI F DP +
Sbjct: 70 LRAQYPEEMTIVLQHQFWDLALDREKNVISVGLSFGGVGSILCIPVNAITAFADPHIRMA 129
Query: 138 LEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVIS 197
L F E+ E + PD+ D V + ++T ++ K A V+S
Sbjct: 130 LRFSHS---PLEEDEDVEIPEGAVEPDDIDPAHHPEV-----QPETTSSEDVKKDAEVVS 181
Query: 198 LDNFRKK 204
L FRK+
Sbjct: 182 LAAFRKR 188
>gi|126732385|ref|ZP_01748184.1| hypothetical protein SSE37_05532 [Sagittula stellata E-37]
gi|126707024|gb|EBA06091.1| hypothetical protein SSE37_05532 [Sagittula stellata E-37]
Length = 145
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 23/168 (13%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
A+RGL++ VL+ V+ G LPG+HHF+ITF T V ++ L++ YP +MT+V+QN
Sbjct: 1 MHRAMRGLIQEVLTGVSEHG-LPGDHHFFITFDTRHPEVELADWLKQRYPGEMTVVVQNW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
+ DL+V D F + L+F + PERL IP++AI+ F DPSV F L F+ +E +
Sbjct: 60 YEDLEVGDEGFAITLNFGDAPERLSIPYDAIRTFVDPSVEFGLRFESQDSEEDEGDDDPT 119
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
K + ++ A V+SLD FRK
Sbjct: 120 PDGDGPG----------------------KPEAQHHDAEVVSLDRFRK 145
>gi|294011543|ref|YP_003545003.1| hypothetical protein SJA_C1-15570 [Sphingobium japonicum UT26S]
gi|292674873|dbj|BAI96391.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 158
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 26/184 (14%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+ + I YD + +EALR +V VL E+ G LPG HHFYITF T A GV I ++L
Sbjct: 1 MSEDLPDSLIPYDEIVQEALRAVVGRVLGEIERSGGLPGAHHFYITFKTQAAGVDIPRHL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+ +P++MTIV+QN+FWDLKV D+ F V L+F+ V L IPF AI F DP+VNF L+F
Sbjct: 61 VERFPDEMTIVLQNKFWDLKVSDDAFGVSLTFNQVAAHLHIPFAAITAFVDPAVNFALQF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
+ E E + ++V+++D
Sbjct: 121 QAQADIAPEPHEEAEN--------------------------DAPQVMTEDGSNVVTVDF 154
Query: 201 FRKK 204
+KK
Sbjct: 155 GKKK 158
>gi|94498512|ref|ZP_01305068.1| hypothetical protein SKA58_04436 [Sphingomonas sp. SKA58]
gi|94422055|gb|EAT07100.1| hypothetical protein SKA58_04436 [Sphingomonas sp. SKA58]
Length = 158
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/184 (38%), Positives = 98/184 (53%), Gaps = 26/184 (14%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+ + I YD + +EALR +V VL EV G LPG HHFYITF T A V I ++L
Sbjct: 1 MSDDLPDSLIPYDEIVQEALRAVVGRVLDEVQQTGGLPGTHHFYITFKTQAPDVDIPKHL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+ +P++MTIV+QN+FWDLKV D HFEV L+F+ V LVIPF+AI F DP+VNF L+F
Sbjct: 61 VERFPDEMTIVLQNKFWDLKVSDQHFEVSLTFNQVAAHLVIPFSAITAFVDPAVNFALQF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
V + I E + + ++V+++D
Sbjct: 121 QVQSDEIPEPHDEAEN--------------------------DGPQVTNEDGSNVVTVDF 154
Query: 201 FRKK 204
+KK
Sbjct: 155 GKKK 158
>gi|307294377|ref|ZP_07574221.1| hypothetical protein SphchDRAFT_1847 [Sphingobium chlorophenolicum
L-1]
gi|306880528|gb|EFN11745.1| hypothetical protein SphchDRAFT_1847 [Sphingobium chlorophenolicum
L-1]
Length = 158
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 66/184 (35%), Positives = 94/184 (51%), Gaps = 26/184 (14%)
Query: 21 IDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNL 80
+ + I YD + +EALR +V VL E+ G LPG HHFYITF T A GV I ++L
Sbjct: 1 MSEDLPDSLIPYDEIVQEALRAVVGRVLGEIERSGGLPGVHHFYITFKTQAVGVDIPRHL 60
Query: 81 RKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF 140
+ +P++MTIV+QN+FWDLKV ++ F V L+F+ V L IPF AI F DP+VNF L+F
Sbjct: 61 VERFPDEMTIVLQNKFWDLKVSEDAFGVSLTFNQVAAHLHIPFAAITAFVDPAVNFALQF 120
Query: 141 DVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDN 200
+ E E + ++V+++D
Sbjct: 121 QAQADIAPEPHEEAEN--------------------------DAPQVTNEDGSNVVTVDF 154
Query: 201 FRKK 204
+KK
Sbjct: 155 GKKK 158
>gi|310816105|ref|YP_003964069.1| hypothetical protein EIO_1645 [Ketogulonicigenium vulgare Y25]
gi|308754840|gb|ADO42769.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 146
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
A+RGL++ +L ++A G LPGEHHF+ITF TN V ++ L YP +MT+V+Q+
Sbjct: 1 MHRAMRGLIQEILGDIAQTG-LPGEHHFFITFDTNHPDVELADWLFDRYPHEMTVVLQHW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
F DL V D F V L+F + PE + +P++AI+ F DPSV F L F+ E +++ E G
Sbjct: 60 FQDLNVTDEGFSVVLNFGDNPEPIYVPYDAIRTFVDPSVEFGLRFEAQDEDEDDEDEDGE 119
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
A ++SLD FR+
Sbjct: 120 APMAEMV---------------------EPDDTPRPQAEIVSLDKFRR 146
>gi|16126341|ref|NP_420905.1| hypothetical protein CC_2102 [Caulobacter crescentus CB15]
gi|221235124|ref|YP_002517560.1| hypothetical protein CCNA_02187 [Caulobacter crescentus NA1000]
gi|13423587|gb|AAK24073.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964296|gb|ACL95652.1| hypothetical protein CCNA_02187 [Caulobacter crescentus NA1000]
Length = 162
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 23/179 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+L YP
Sbjct: 7 PEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYP 66
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 67 DEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQF----- 121
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + + K+ + + ++ ++SLD FRKK
Sbjct: 122 ------------------SAPEIIEDEPEPDPEPEDKANQGASGDEGPKIVSLDQFRKK 162
>gi|162146691|ref|YP_001601150.1| hypothetical protein GDI_0869 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785266|emb|CAP54812.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 181
Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
D + + YD ++A R ++ L V G LP HHFYIT+ TN GV +
Sbjct: 10 GFDAAIPDSLLPYDSWIEDAYRTVMLRALELVGREG-LPEGHHFYITYLTNWPGVELPAR 68
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLD--NHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFE 137
LR YP ++TIV+Q+QFWDLKV + VGLSF V LVIP +AI F DP +
Sbjct: 69 LRAQYPHEITIVLQHQFWDLKVDEASRTVSVGLSFGGVGSTLVIPIDAITAFADPHIRLA 128
Query: 138 LEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVIS 197
L F E++ G D + + + + V+S
Sbjct: 129 LRFTPPELASEDEEPDGAEAPDAAPADT-------------------EARAEESSSQVVS 169
Query: 198 LDNFRKK 204
L FRKK
Sbjct: 170 LAAFRKK 176
>gi|329113258|ref|ZP_08242041.1| Hypothetical protein APO_0022 [Acetobacter pomorum DM001]
gi|326697399|gb|EGE49057.1| Hypothetical protein APO_0022 [Acetobacter pomorum DM001]
Length = 178
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
+ Y+ +A R ++ L V+ G L GEHHFY+TF T+ GV I LR YP
Sbjct: 16 ATSLLPYERWLNDASRSVMLNALEHVSREG-LAGEHHFYLTFLTDFPGVDIPARLRAQYP 74
Query: 86 EKMTIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH 143
+MTIV+Q+QFWDLKV VGLSF V LVIP AI GF DP+V F L F
Sbjct: 75 HEMTIVLQHQFWDLKVDRAAKTVSVGLSFGGVGSILVIPVQAITGFADPAVRFSLHF--- 131
Query: 144 IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + + + + + + + V+SLD FRK
Sbjct: 132 -------------------AAMEPTEEPTPEEPTTGQPEPDRPEESDSSSQVVSLDAFRK 172
Query: 204 K 204
K
Sbjct: 173 K 173
>gi|83858887|ref|ZP_00952409.1| hypothetical protein OA2633_05271 [Oceanicaulis alexandrii
HTCC2633]
gi|83853710|gb|EAP91562.1| hypothetical protein OA2633_05271 [Oceanicaulis alexandrii
HTCC2633]
Length = 152
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 31/179 (17%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D ++Y+ LA+EALR +V+ L A G LPG HHFYITF T+ G I ++L YP
Sbjct: 4 AKDLMQYEQLAQEALRDVVRKSLERAAGDG-LPGAHHFYITFRTSDPGCDIDESLASAYP 62
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E+MTIV+++QFWDL+V D FEV L F VP+ L +P+ A+ F+DPSV F L FD
Sbjct: 63 EEMTIVLEHQFWDLEVDDAGFEVTLKFGGVPKYLKVPWRAVTRFHDPSVGFRLHFDYAAP 122
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
++ G+ ++ +V+SL+ FR K
Sbjct: 123 SPDDTPGQGD------------------------------GDDQVNEGTVVSLEAFRNK 151
>gi|148260339|ref|YP_001234466.1| hypothetical protein Acry_1336 [Acidiphilium cryptum JF-5]
gi|326403530|ref|YP_004283612.1| hypothetical protein ACMV_13830 [Acidiphilium multivorum AIU301]
gi|146402020|gb|ABQ30547.1| protein of unknown function DUF1321 [Acidiphilium cryptum JF-5]
gi|325050392|dbj|BAJ80730.1| hypothetical protein ACMV_13830 [Acidiphilium multivorum AIU301]
Length = 169
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
DT + + YD ++ALR +V L + G +PGEHHFYITFAT GV + LR
Sbjct: 6 DTPIPESLLPYDEWTEDALRLVVLRALDHASREG-MPGEHHFYITFATAHPGVIMPDRLR 64
Query: 82 KNYPEKMTIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YP++MTIV+Q+Q+ DL V F V LSF VP L IP +AI F DP+V F L+
Sbjct: 65 AQYPDEMTIVLQHQYRDLSVDAEAQRFSVRLSFGGVPATLDIPLDAITAFADPAVRFGLQ 124
Query: 140 FDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLD 199
F + E+ P+ V+SLD
Sbjct: 125 FAARVPEAPEEAPAAAPEPAPPPPEQGPAE-------------------------VVSLD 159
Query: 200 NFRKK 204
FR++
Sbjct: 160 AFRRR 164
>gi|209543319|ref|YP_002275548.1| hypothetical protein Gdia_1150 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530996|gb|ACI50933.1| protein of unknown function DUF1321 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 181
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 83/187 (44%), Gaps = 22/187 (11%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN 79
D + + YD ++A R ++ L V G LP HHFYIT+ TN GV +
Sbjct: 10 GFDAAIPDSLLPYDSWIEDAYRTVMLRALELVGREG-LPEGHHFYITYLTNWPGVELPAR 68
Query: 80 LRKNYPEKMTIVIQNQFWDLKVLD--NHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFE 137
LR Y ++TIV+Q+QFWDLKV + VGLSF V LVIP +AI F DP +
Sbjct: 69 LRAQYLHEITIVLQHQFWDLKVDEASRTVSVGLSFGGVGSTLVIPIDAITAFADPHIRLA 128
Query: 138 LEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVIS 197
L F E++ G D + + + + V+S
Sbjct: 129 LRFTPPELASEDEEPDGAEAPDAAPADT-------------------EARAEESSSQVVS 169
Query: 198 LDNFRKK 204
L FRKK
Sbjct: 170 LAAFRKK 176
>gi|149202503|ref|ZP_01879475.1| hypothetical protein RTM1035_07799 [Roseovarius sp. TM1035]
gi|149143785|gb|EDM31819.1| hypothetical protein RTM1035_07799 [Roseovarius sp. TM1035]
Length = 141
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 27/168 (16%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ 95
A+RGL++ VLS+V + G LPG HHF+ITF T +++ L++ YP +MT+V+Q+
Sbjct: 1 MHRAMRGLIQEVLSKVQAEG-LPGAHHFFITFDTKHPEAKLADWLKQRYPSEMTVVMQHW 59
Query: 96 FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGN 155
+ DLKV ++ F V L+F + PERL +P+++I+ F DPSV F L F+ +
Sbjct: 60 YDDLKVTNDGFGVTLNFGDAPERLYVPYDSIQTFVDPSVEFGLRFETQEVDDDIDELDDT 119
Query: 156 TGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
A V+ LD+FRK
Sbjct: 120 DPPDDDP--------------------------SPGKAEVVRLDSFRK 141
>gi|258543545|ref|YP_003188978.1| hypothetical protein APA01_24930 [Acetobacter pasteurianus IFO
3283-01]
gi|256634623|dbj|BAI00599.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256637679|dbj|BAI03648.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256640733|dbj|BAI06695.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643788|dbj|BAI09743.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646843|dbj|BAI12791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256649896|dbj|BAI15837.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256652886|dbj|BAI18820.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655940|dbj|BAI21867.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 178
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 83/179 (46%), Gaps = 25/179 (13%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
+ Y+ EA R ++ L V+ G L GEHHFY+TF T+ GV I LR YP +
Sbjct: 18 SLLPYERWLNEASRSVMLNALEHVSREG-LAGEHHFYLTFLTDFPGVDIPARLRAQYPHE 76
Query: 88 MTIVIQNQFWDLKVL--DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
MTIV+Q+QFWDLKV VGLSF V LVIP AI GF DP++ F L F
Sbjct: 77 MTIVLQHQFWDLKVDRKAKTVSVGLSFGGVGSILVIPVQAITGFADPAIRFSLHF----- 131
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + + + + + + V+SLD FRKK
Sbjct: 132 -----------------AAMEPTEEPTPEEPTTGQPEQDGPEESDSSSQVVSLDAFRKK 173
>gi|158429803|pdb|2QAS|A Chain A, Crystal Structure Of Caulobacter Crescentus Sspb Ortholog
Length = 157
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 57/145 (39%), Positives = 81/145 (55%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+L YP
Sbjct: 10 PEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYP 69
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 70 DEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSAPEI 129
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQ 170
+E + D+
Sbjct: 130 IEDEPEPDPEPEDKANQGASGDEGP 154
>gi|158429805|pdb|2QAZ|A Chain A, Structure Of C. Crescentus Sspb Ortholog
gi|158429806|pdb|2QAZ|B Chain B, Structure Of C. Crescentus Sspb Ortholog
gi|158429807|pdb|2QAZ|C Chain C, Structure Of C. Crescentus Sspb Ortholog
gi|158429808|pdb|2QAZ|D Chain D, Structure Of C. Crescentus Sspb Ortholog
Length = 128
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D ++Y+ +A++ALRG+VK L + A+ G LP HH YITF T A GV Q+L YP
Sbjct: 10 PEDLMQYEAMAQDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYP 69
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI 144
++MTIV+Q+Q+WDL + F V L F P+RL +P+ A+ FYDPSV F L+F
Sbjct: 70 DEMTIVLQHQYWDLAPGETFFSVTLKFGGQPKRLSVPYAALTRFYDPSVQFALQFSAPE 128
>gi|296532841|ref|ZP_06895511.1| protein of hypothetical function DUF1321 [Roseomonas cervicalis
ATCC 49957]
gi|296266829|gb|EFH12784.1| protein of hypothetical function DUF1321 [Roseomonas cervicalis
ATCC 49957]
Length = 148
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 22 DTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLR 81
+T + YD ++A+R + L G LPGEHHFY+TF T+ G+ I +L+
Sbjct: 4 ETRQAESLLPYDRWTEDAMREVALRALEHAGEHG-LPGEHHFYLTFRTDRPGIAIPSHLK 62
Query: 82 KNYPEKMTIVIQNQFWDLKVLDNH--FEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELE 139
YPE+MTIV+Q+QFWDLKV GLSF VP LVIP AI F+DP V L
Sbjct: 63 ARYPEEMTIVLQHQFWDLKVDRQAGLVSAGLSFGGVPATLVIPIAAITAFWDPHVRVGLR 122
Query: 140 F 140
F
Sbjct: 123 F 123
>gi|189184158|ref|YP_001937943.1| hypothetical protein OTT_1251 [Orientia tsutsugamushi str. Ikeda]
gi|189180929|dbj|BAG40709.1| hypothetical protein OTT_1251 [Orientia tsutsugamushi str. Ikeda]
Length = 175
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y+ L +++ +VK L ++ +++FYI+F T GV+IS++LR Y E+MT
Sbjct: 4 INYEELIDQSMLNVVKQALKFASTN-CNFEDNYFYISFCTTFPGVKISEHLRVKYLEQMT 62
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QF DL + + F V LSFS E++V+P+ +I F DP ++ ++ ++
Sbjct: 63 IVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQ 122
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+L G V S + + + K K+ K NK V+SLD+FRKK
Sbjct: 123 QLYKNVDGIVEDSNKENKNQYCDQLVATNEKLKNMKDIVGNK---VVSLDSFRKK 174
>gi|148284854|ref|YP_001248944.1| hypothetical protein OTBS_1581 [Orientia tsutsugamushi str.
Boryong]
gi|146740293|emb|CAM80674.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
Length = 175
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y+ L +++ +VK L ++ +L +++FYI+F T GV+IS++LR Y E+MT
Sbjct: 4 INYEELIDQSMLNVVKQALKFASTACNLE-DNYFYISFCTIFPGVKISEHLRVKYVEQMT 62
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q+QF DL + + F V LSFS E++V+P+ +I F DP ++ ++ ++
Sbjct: 63 IVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQ 122
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+L V S + + + K K+ K NK V+SLD+FRKK
Sbjct: 123 QLYKNVDSIVEDSSKENKNQYCDQLVATNEKLKNMKDIVGNK---VVSLDSFRKK 174
>gi|222475080|ref|YP_002563495.1| hypothetical protein AMF_374 [Anaplasma marginale str. Florida]
gi|222419216|gb|ACM49239.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 183
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 20 WIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLP--GEHHFYITFATNARGVRIS 77
W + M+ D + Y L A+ +V+ L V+ LP GE H I+F T GV +
Sbjct: 21 WCEVSMS-DLVDYRRLVYAAMCSVVREALDFVSK---LPSTGEVHVTISFLTGCSGVVLP 76
Query: 78 QNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFE 137
LR YPE MTIV+Q QF +L V DN+F V LSF E + +PF A+ + D NF
Sbjct: 77 DYLRAQYPENMTIVLQYQFRELCVSDNYFRVILSFKGKEECITVPFRAVVKYVDMLANFS 136
Query: 138 LEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVIS 197
L+ + + + + P + ++I
Sbjct: 137 LDLEQYGNLEFGMDGDSDNDDIAECPPTDTAHTVRD--------------------NIIF 176
Query: 198 LDNFRK 203
+D F K
Sbjct: 177 IDKFLK 182
>gi|23008550|ref|ZP_00049949.1| COG3814: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 105
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/90 (61%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M D IRYD+L ++ALRG+V+ VL++ A G L GEHHFYI+F T A GVR+SQ LR+ Y
Sbjct: 1 MAEDLIRYDLLVQDALRGVVRKVLTDAARDG-LSGEHHFYISFRTEAPGVRMSQRLREKY 59
Query: 85 PEKMTIVIQNQFWDLKVLDNHFEVGLSFSN 114
P+ MTIV+Q+QFWDL V ++ FEVGLSFS
Sbjct: 60 PQDMTIVLQHQFWDLGVTEHSFEVGLSFSG 89
>gi|56416714|ref|YP_153788.1| hypothetical protein AM504 [Anaplasma marginale str. St. Maries]
gi|254994922|ref|ZP_05277112.1| hypothetical protein AmarM_02277 [Anaplasma marginale str.
Mississippi]
gi|255003058|ref|ZP_05278022.1| hypothetical protein AmarPR_02000 [Anaplasma marginale str. Puerto
Rico]
gi|255004181|ref|ZP_05278982.1| hypothetical protein AmarV_02212 [Anaplasma marginale str.
Virginia]
gi|56387946|gb|AAV86533.1| hypothetical protein AM504 [Anaplasma marginale str. St. Maries]
Length = 158
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLP--GEHHFYITFATNARGVRISQNLRKN 83
D + Y L A+ +V+ L V+ LP GE H I+F T GV + LR
Sbjct: 1 MSDLVDYRRLVYAAMCSVVREALDFVSK---LPSTGEVHVTISFLTGCSGVVLPDYLRAQ 57
Query: 84 YPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH 143
YPE MTIV+Q QF +L V DN+F V LSF E + +PF A+ + D NF L+ + +
Sbjct: 58 YPENMTIVLQYQFRELCVSDNYFRVILSFKGKEECITVPFRAVVKYVDMLANFSLDLEQY 117
Query: 144 IEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ + P + ++I +D F K
Sbjct: 118 GNLEFGMDGDSDNDDIAECPPTDTAHTVRD--------------------NIIFIDKFLK 157
>gi|57239070|ref|YP_180206.1| hypothetical protein Erum3420 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579013|ref|YP_197225.1| hypothetical protein ERWE_CDS_03490 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161149|emb|CAH58062.1| conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58417639|emb|CAI26843.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 153
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
+ + Y L A+ ++K L+ +A H I+F T +GV + +++ +YP
Sbjct: 1 MSNIVNYQKLMHSAMCKVIKDALTVIAKPEYC-NSIHVVISFLTQHKGVILPDHVKNSYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++TIV+Q+QF L + DNH V LSF+ E + I + +I + D F L+ +I
Sbjct: 60 NEITIVLQHQFRHLCIHDNHISVVLSFNGKEEAVTITYCSITKYVDAYQGFSLDLKPYIN 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
I +D++ + K+ N ++I +D F KK
Sbjct: 120 SII-------------------------KEEDNNSEDCPKEDKNNSQDNIIFIDTFLKK 153
>gi|58617072|ref|YP_196271.1| hypothetical protein ERGA_CDS_03450 [Ehrlichia ruminantium str.
Gardel]
gi|58416684|emb|CAI27797.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 153
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
+ + Y L A+ ++K L+ +A H I+F T +GV + +++ +YP
Sbjct: 1 MSNIVNYQKLMHSAMCKVIKDALTVIAKPEYC-NSIHVVISFLTQHKGVILPDHVKNSYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
++TIV+Q+QF L + DNH V LSF+ E + I + +I + D F L+ +I
Sbjct: 60 NEITIVLQHQFRHLCIHDNHISVVLSFNGKEEAVTITYCSITKYVDAYQGFSLDLKPYIN 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
I ++ + N + K N ++I +D F KK
Sbjct: 120 SIIKEEDNNNEDSL-------------------------KDDKNNTQDNIIFIDTFLKK 153
>gi|73666951|ref|YP_302967.1| hypothetical protein Ecaj_0325 [Ehrlichia canis str. Jake]
gi|72394092|gb|AAZ68369.1| conserved hypothetical protein [Ehrlichia canis str. Jake]
Length = 157
Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 22/179 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
+ I Y L A+ +VK L+ +A H I+F TN +GV + ++++NYP
Sbjct: 1 MSNAIDYQKLMHSAMCTVVKNALTVIAHSEH-STNVHIAISFLTNYKGVTLPDHIKENYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+++T+++Q+QF L+V DN V LSF E +VIPF++I + D F L+ + ++
Sbjct: 60 QEITVILQHQFRSLQVFDNSISVILSFRGQEETVVIPFHSIIKYIDVYQGFVLDLEQYMS 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ E+ + + + K+ + +N ++I +D F KK
Sbjct: 120 NNIEEADNYDYD---------------------TDDKNEESDQQNNQDNIIFIDTFLKK 157
>gi|269958868|ref|YP_003328657.1| hypothetical protein ACIS_00801 [Anaplasma centrale str. Israel]
gi|269848699|gb|ACZ49343.1| hypothetical protein ACIS_00801 [Anaplasma centrale str. Israel]
Length = 158
Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 21/178 (11%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D + Y L A+ +V+ L V+ + S GE H I+F TN GV + LR YP
Sbjct: 1 MSDLVDYRRLVYAAMCSVVREALDFVSKL-SPTGEVHITISFLTNYSGVVLPDYLRAQYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E MTIV+Q QF +L V D+ F V LSF E + +PF A+ + D NF L+ + + +
Sbjct: 60 ENMTIVLQYQFRELCVSDSSFRVILSFKGKEECITVPFRAVVKYVDMLANFSLDLEQYGD 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
+ V P + ++I +D F K
Sbjct: 120 IEFGMDADSDNDDVAGYPSTDTAHTVRD--------------------NIIFIDKFLK 157
>gi|88658634|ref|YP_507543.1| hypothetical protein ECH_0744 [Ehrlichia chaffeensis str. Arkansas]
gi|88600091|gb|ABD45560.1| conserved hypothetical protein [Ehrlichia chaffeensis str.
Arkansas]
Length = 157
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
+ I Y L A+ +VK L+ VA H I+F T+ +GV + ++++ NYP
Sbjct: 1 MSNVIDYQKLMHAAMCSVVKNALTVVAQSEHFY-NVHIAISFLTHYKGVTLPEHVKNNYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
+++T+++Q+QF L+V DN V LSF E +VIP+ +I + D F L+F+ +
Sbjct: 60 QEITVILQHQFRSLQVFDNSASVVLSFRGKEETVVIPYQSIIKYIDVYQGFVLDFEQYTN 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
E+ + + + + K K ++I +D F KK
Sbjct: 120 SDIEEFDDCDHDIDDS---------------------NEDKSQKGNQDNIIFIDTFLKK 157
>gi|88607243|ref|YP_505354.1| hypothetical protein APH_0775 [Anaplasma phagocytophilum HZ]
gi|88598306|gb|ABD43776.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ]
Length = 157
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 26 NYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYP 85
D + Y L A+ G+V+ +S + + S + H ++F TN GV + LR YP
Sbjct: 1 MGDLVDYRKLVYSAMCGVVREAMSFFSKL-SPTRDVHVAVSFVTNCSGVVLPDYLRIQYP 59
Query: 86 EKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIE 145
E MTIV+Q QF +L V +N F V LSF E + +PF AI + D NF L+ + + +
Sbjct: 60 ESMTIVLQYQFRELNVSENGFSVVLSFRGKEELITVPFRAIVKYVDMISNFSLDLEQYGD 119
Query: 146 HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRK 203
E + L + ++I +D FRK
Sbjct: 120 IELEMGMDSDNDDDLDEDIV---------------------SSHTTQDNIIFIDKFRK 156
>gi|218661031|ref|ZP_03516961.1| hypothetical protein RetlI_16463 [Rhizobium etli IE4771]
Length = 126
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/73 (68%), Positives = 63/73 (86%)
Query: 25 MNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNY 84
M DHIRYDILA++ALRG+++ VL+EVA+ G LPG+HHF+ITF T A GVRISQ+L+ Y
Sbjct: 1 MGQDHIRYDILAQDALRGVIRKVLAEVATTGRLPGDHHFFITFLTGAAGVRISQHLKSKY 60
Query: 85 PEKMTIVIQNQFW 97
PE+MTIVIQ+QFW
Sbjct: 61 PEQMTIVIQHQFW 73
>gi|254452768|ref|ZP_05066205.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198267174|gb|EDY91444.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 111
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V I+ L YP +MT+VIQ+Q+ LKV D+ F + LSF + PE L +P++AIK F
Sbjct: 2 HPDVEIADWLSDRYPGEMTVVIQHQYESLKVTDHGFSITLSFGDKPEPLYVPYDAIKTFV 61
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
DPSV F L F+ + E +K
Sbjct: 62 DPSVEFGLRFEAQDDEDGET-----------------------PEAPMDVMAEPEKDAPK 98
Query: 191 KMASVISLDNFRK 203
K A ++SLD FRK
Sbjct: 99 KDADIVSLDQFRK 111
>gi|254796819|ref|YP_003081656.1| hypothetical protein NRI_0436 [Neorickettsia risticii str.
Illinois]
gi|254590067|gb|ACT69429.1| conserved hypothetical protein [Neorickettsia risticii str.
Illinois]
Length = 153
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I+Y L A+ G+V+ V+ +V++ + +F+ITF+T +S +L+K YP +M+
Sbjct: 4 IKYKALVNTAMLGVVRSVMKDVSAGEA----ANFFITFSTR--NASLSDSLKKKYPCEMS 57
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF-DVHIEHIE 148
I++QNQF +L+V F V LSFS V E + +PF++I F D NF LEF D+ E
Sbjct: 58 IILQNQFRNLQVSYERFSVVLSFSGVEECITVPFSSILYFLDRECNFALEFHDLASEGSV 117
Query: 149 EKLEGGNTGKVLTSPDNFDKNQ 170
++++ + G Q
Sbjct: 118 DEVDSCDAGGAYVPGTGTKGEQ 139
>gi|15604564|ref|NP_221082.1| hypothetical protein RP727 [Rickettsia prowazekii str. Madrid E]
gi|3861259|emb|CAA15158.1| unknown [Rickettsia prowazekii]
gi|292572371|gb|ADE30286.1| hypothetical protein rpr22_CDS710 [Rickettsia prowazekii Rp22]
Length = 159
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 3 IEYKKFVNEYMLEFVKKILTKI-QHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V DN F + +SF V E + IPF+++ F D + N+ L F+ + E
Sbjct: 62 IVLQYQFENLTVKDNGFSLTVSFDGVKEIIYIPFDSLISFVDSNNNYSLTFNQSLNIPEH 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + + N +VI LD FR
Sbjct: 122 QQYEKEISNNKSYKTSLSLNP-----------------------NVIMLDKFR 151
>gi|67458571|ref|YP_246195.1| hypothetical protein RF_0179 [Rickettsia felis URRWXCal2]
gi|67004104|gb|AAY61030.1| unknown [Rickettsia felis URRWXCal2]
Length = 178
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ + +L + YI++ T+ V + +++ YP+++T
Sbjct: 22 IEYKKFVNEYMLEFVKKILTKI-QLENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 80
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 81 IVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTFNQSLNIQEN 140
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + N +VI LD FR
Sbjct: 141 HQHEEEISSNKSYKTSLSPNP-----------------------NVIMLDKFR 170
>gi|34581280|ref|ZP_00142760.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262665|gb|EAA26169.1| unknown [Rickettsia sibirica 246]
Length = 157
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 3 IEYKKFVHEYMLEFVKKILTKI-QHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 62 IVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTFNQSLNIHEN 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+++ + + + + +VI LD FR
Sbjct: 122 PQH-----------------------EEAISNNKSDQTSSSSSPNVIMLDKFR 151
>gi|88608394|ref|YP_506347.1| hypothetical protein NSE_0462 [Neorickettsia sennetsu str.
Miyayama]
gi|88600563|gb|ABD46031.1| conserved hypothetical protein [Neorickettsia sennetsu str.
Miyayama]
Length = 166
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I+Y L A+ G+V+ V+ +V++ + +F+ITF+T +S L+K YP +M+
Sbjct: 17 IKYKALVNAAMLGIVRSVMKDVSAGEA----ANFFITFSTR--NTSLSDGLKKKYPREMS 70
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF-DVHIEHIE 148
I++QNQF DL+V F V LSFS V E + +PF++I F D NF LEF D+ E
Sbjct: 71 IILQNQFSDLQVSYEKFSVVLSFSGVEECITVPFSSILYFLDRECNFALEFHDLASEGSV 130
Query: 149 EKLEGGNTGKVLTSPDNFDKNQ 170
++++ N G N Q
Sbjct: 131 DEVDFCNAGGAYVPGTNAKGEQ 152
>gi|229587083|ref|YP_002845584.1| hypothetical protein RAF_ORF1017 [Rickettsia africae ESF-5]
gi|228022133|gb|ACP53841.1| Unknown [Rickettsia africae ESF-5]
Length = 158
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 3 IEYKKFVHEYMLEFVKKILTKI-QHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF+ V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 62 IVLQYQFENLIVNDTGFSLTVSFNGVKEIIYVPFDALISFVDSNNNYNLTFNQSLNIHEN 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
S KS + + + +VI LD FR
Sbjct: 122 PQHEEAI----------------------SNNKSDQTSSSSSSPNVIMLDKFR 152
>gi|51473898|ref|YP_067655.1| hypothetical protein RT0714 [Rickettsia typhi str. Wilmington]
gi|51460210|gb|AAU04173.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 159
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+K+T
Sbjct: 3 IEYKKFVNEYMLEFVKKILTKI-QYENLYWDQLIYISYRTDNPAVILPSKVKQAYPKKIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V DN F + +SF V E + IPF+A+ F D + N+ L F+ + E
Sbjct: 62 IVLQYQFENLIVKDNGFSLTVSFDGVKEIIYIPFDALISFVDSNNNYSLTFNQSLNIQEP 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + + N +VI LD FR
Sbjct: 122 QQYEKAISNNKSYKTSLSSNP-----------------------NVIMLDKFR 151
>gi|91205180|ref|YP_537535.1| hypothetical protein RBE_0365 [Rickettsia bellii RML369-C]
gi|157827483|ref|YP_001496547.1| hypothetical protein A1I_05950 [Rickettsia bellii OSU 85-389]
gi|91068724|gb|ABE04446.1| unknown [Rickettsia bellii RML369-C]
gi|157802787|gb|ABV79510.1| hypothetical protein A1I_05950 [Rickettsia bellii OSU 85-389]
Length = 169
Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E++ VK VL+ + +L + YI++ T+ V + +R+ YP+++T
Sbjct: 3 IEYKKFLNESMLEFVKKVLARI-QHENLYWDQLIYISYKTDHPAVILPLKVRQAYPKEIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEF-DVHIEHIE 148
IV+QNQF ++ V D F V LSFS + E + IPF+A+ F D S ++ F
Sbjct: 62 IVLQNQFENIIVKDTGFSVMLSFSGIKETIYIPFDALISFVDSSNSYSFTFNQQLNIQNN 121
Query: 149 EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
E K + +N DK +S+ +VI LD FR
Sbjct: 122 NTAEILKIEKQILEEENNDKIDEALLSK-----------------NVIMLDKFR 158
>gi|239947174|ref|ZP_04698927.1| dephospho-CoA kinase [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921450|gb|EER21474.1| dephospho-CoA kinase [Rickettsia endosymbiont of Ixodes scapularis]
Length = 159
Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T V + +++ YP+++T
Sbjct: 3 IEYKKFVNEYMLEFVKKILTKI-QHENLYWDQLIYISYRTYNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF +V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 62 IVLQYQFENLIVNDTGFSLTVSFDDVKEIIYVPFDALISFVDSNNNYSLTFNQPLNIQEN 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + + + +VI LD FR
Sbjct: 122 PQHEEEISNNKSY-----------------------QTSSSSNPNVIMLDKFR 151
>gi|157964870|ref|YP_001499694.1| hypothetical protein RMA_1146 [Rickettsia massiliae MTU5]
gi|157844646|gb|ABV85147.1| hypothetical protein RMA_1146 [Rickettsia massiliae MTU5]
Length = 170
Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 16 IEYKKFVHEYMLEFVKKILTKI-QHENLYWDQLIYISYRTDNPAVILPSKVKQAYPQQIT 74
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 75 IVLQYQFENLIVNDTGFSLMVSFDGVKEIIYVPFDALISFVDSNNNYSLTFNHSLNIHEN 134
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + + +VI LD FR
Sbjct: 135 PQHEEEISNNKSYQTSSSSSP-----------------------NVIMLDKFR 164
>gi|157826198|ref|YP_001493918.1| hypothetical protein A1C_05875 [Rickettsia akari str. Hartford]
gi|157800156|gb|ABV75410.1| hypothetical protein A1C_05875 [Rickettsia akari str. Hartford]
Length = 157
Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T++ V + ++++YP+++T
Sbjct: 3 IEYKKFVNEYMLEFVKKILTKI-QHENLYWDQLIYISYKTDSPAVILPSKVKQSYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 62 IVLQYQFENLIVHDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIQEN 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + + NQ +VI LD FR
Sbjct: 122 QQHEEEINTNKSYKTSLSPNQ-----------------------NVIMLDKFR 151
>gi|254462141|ref|ZP_05075557.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206678730|gb|EDZ43217.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 117
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 75 RISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSV 134
+I+ LR+ YP +MT+V+Q+ F +L + D+ F + L+F + PE L IPF+A++ F DPSV
Sbjct: 2 QIADWLRERYPAEMTVVVQHWFDNLDIRDDGFSITLNFGDAPEPLNIPFDALRTFVDPSV 61
Query: 135 NFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS 194
F L F P +Q ++ + ++ K A
Sbjct: 62 EFGLRF-------------EADEDDEEEPALHSVDQEAPETEPAEIMLVDEEDAPKKDAE 108
Query: 195 VISLDNFRK 203
++SLD FRK
Sbjct: 109 IVSLDAFRK 117
>gi|157828954|ref|YP_001495196.1| hypothetical protein A1G_06150 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933679|ref|YP_001650468.1| hypothetical protein RrIowa_1322 [Rickettsia rickettsii str. Iowa]
gi|157801435|gb|ABV76688.1| hypothetical protein A1G_06150 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908766|gb|ABY73062.1| hypothetical protein RrIowa_1322 [Rickettsia rickettsii str. Iowa]
Length = 157
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 3 IEYKKFVHEYMLEFVKKILTKI-QHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F + E
Sbjct: 62 IVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYSLTFSQSLNIHEN 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + + +VI LD FR
Sbjct: 122 PQHEEAISNNKSYQTSSSSSP-----------------------NVIMLDKFR 151
>gi|15893032|ref|NP_360746.1| hypothetical protein RC1109 [Rickettsia conorii str. Malish 7]
gi|15620233|gb|AAL03647.1| unknown [Rickettsia conorii str. Malish 7]
Length = 157
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 3 IEYKKFVHEYMLEFVKKILTKI-QHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 62 IVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIHEN 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+++ + + + + +VI LD FR
Sbjct: 122 PQH-----------------------EEAISNNKSDQTSSSSSPNVIMLDKFR 151
>gi|238650385|ref|YP_002916237.1| hypothetical protein RPR_01460 [Rickettsia peacockii str. Rustic]
gi|238624483|gb|ACR47189.1| hypothetical protein RPR_01460 [Rickettsia peacockii str. Rustic]
Length = 157
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 30 IRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMT 89
I Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++T
Sbjct: 3 IEYKKFVHEYMLEFVKKILTKI-QHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQIT 61
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE 149
IV+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 62 IVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDSNNNYNLTFNQSLNIHEN 121
Query: 150 KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + + +VI LD FR
Sbjct: 122 PQHEEAISNNKSYQTSSSSSP-----------------------NVIMLDKFR 151
>gi|157803405|ref|YP_001491954.1| dephospho-CoA kinase [Rickettsia canadensis str. McKiel]
gi|157784668|gb|ABV73169.1| dephospho-CoA kinase [Rickettsia canadensis str. McKiel]
Length = 159
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 24/172 (13%)
Query: 31 RYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTI 90
Y E + VK +L+++ +L + YI++ T+ V + +++ YP+++TI
Sbjct: 4 EYKKFVNEYMLEFVKKILTKI-QHENLYWDQLIYISYRTDNPAVILPLKVKQAYPKQITI 62
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
V+Q QF +L V D F + +SF V E + +PF+A+ F D + N+ L F+ + E
Sbjct: 63 VLQYQFENLIVNDTGFSLTVSFYGVKEIIYVPFDALISFIDSNNNYSLTFNQLLNVQEYH 122
Query: 151 LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + N +VI LD FR
Sbjct: 123 QHEKEIRNNKSCKTSLSPNP-----------------------NVIMLDKFR 151
>gi|42520033|ref|NP_965948.1| hypothetical protein WD0128 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99034650|ref|ZP_01314597.1| hypothetical protein Wendoof_01000587 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225631130|ref|ZP_03787847.1| hypothetical protein WUni_002980 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|42409770|gb|AAS13882.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|225591172|gb|EEH12337.1| hypothetical protein WUni_002980 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 145
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 31 RYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTI 90
Y L A ++K L ++ G +P H I F T GV + L+K+YP +M I
Sbjct: 5 DYKKLLNSAKFQVIKKTLDVISGNGFIP---HLEILFFTYFNGVTMPDRLKKSYPTQMLI 61
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++Q+QF+DLKV ++ F V LSF ER+ IPF AI F D L FD +++
Sbjct: 62 ILQHQFYDLKVSEDKFSVSLSFQGKQERITIPFFAISEFRDKISGDVLIFDKISIDSDKE 121
Query: 151 LEGGNTGKVLTSPDNFDKNQTNSV 174
+ + L++ +Q
Sbjct: 122 YKSEKCTEKLSNGSIISIDQLRDE 145
>gi|190570654|ref|YP_001975012.1| hypothetical protein WPa_0202 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019095|ref|ZP_03334902.1| hypothetical protein C1A_867 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356926|emb|CAQ54310.1| Hypothetical protein WP0202 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995204|gb|EEB55845.1| hypothetical protein C1A_867 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 142
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D Y A ++K L+ + P H I F T GV + L+++YP +
Sbjct: 2 DKTDYQKSLSYAKFQVIKKALNTILDNVFTP---HLEIVFFTRFNGVVMPDYLKESYPTQ 58
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
M I++Q+QF+ LKVL++ F V LSF E++ +PF AI F+D L F V +
Sbjct: 59 MLIILQHQFFGLKVLEDKFSVSLSFRGKQEQVTVPFFAISEFHDKISGDTLVFSVDSDKE 118
Query: 148 EEKLEGGNTGKV 159
E +
Sbjct: 119 YESEKCAEKSSN 130
>gi|58584903|ref|YP_198476.1| hypothetical protein Wbm0646 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419219|gb|AAW71234.1| Uncharacterized protein conserved in bacteria [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 145
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 28 DHIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEK 87
D I Y L A ++K L ++ P I F T V IS LRK+YP +
Sbjct: 2 DKIGYKKLLNSAKFQVIKKALDVISGNSFTPN---LEILFFTYFNDVVISDYLRKSYPTQ 58
Query: 88 MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHI 147
M I++Q+QF+ L+V ++ F V LSF E++ +PF AI F+D L FD
Sbjct: 59 MLIILQHQFYGLEVFEDKFSVSLSFHGKQEQITVPFFAISEFHDKISGDVLIFDKINVDF 118
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNS 173
+++ + + ++ +Q +
Sbjct: 119 DKEYKSEKCTENSSNGSIISIDQLHD 144
>gi|68171241|ref|ZP_00544644.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67999323|gb|EAM85969.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 117
Score = 99 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 69 TNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
T+ +GV + +++ NYP+++T+++Q+QF L+V DN V LSF E +VIP+ +I
Sbjct: 3 THYKGVTLPEHVNNNYPQEITVILQHQFRSLQVFDNSASVVLSFRGKEETVVIPYQSIIK 62
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
+ D F L+F+ + E+ + + + + K
Sbjct: 63 YIDVYQGFVLDFEQYTNSDIEEFDDCDHDIDDS---------------------NEDKSQ 101
Query: 189 KNKMASVISLDNFRKK 204
K ++I +D F KK
Sbjct: 102 KGNQDNIIFIDTFLKK 117
>gi|149921704|ref|ZP_01910152.1| hypothetical protein PPSIR1_37534 [Plesiocystis pacifica SIR-1]
gi|149817442|gb|EDM76914.1| hypothetical protein PPSIR1_37534 [Plesiocystis pacifica SIR-1]
Length = 166
Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 46/145 (31%), Gaps = 6/145 (4%)
Query: 44 VKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQF-WDLKVL 102
V+ V+ + + G P H GV ++R+ + E++ I + + DL
Sbjct: 5 VQSVIDSLYAAGRCPRLH-----VNATCEGVVCPDHIREQWQEELIIDLDASYPLDLTFA 59
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTS 162
++ LSF R P+ AI D + + D ++ +
Sbjct: 60 EDGIGADLSFGGYVTRCTFPWEAIYVVADRATGRGIVLDQNMPDSVRHGRRQPEIIPMDE 119
Query: 163 PDNFDKNQTNSVSQDSSKKKSTKKQ 187
+ ++ + +
Sbjct: 120 ATTAALDGLLERRGATNPNATPAQD 144
>gi|149922765|ref|ZP_01911190.1| hypothetical protein PPSIR1_08227 [Plesiocystis pacifica SIR-1]
gi|149816385|gb|EDM75886.1| hypothetical protein PPSIR1_08227 [Plesiocystis pacifica SIR-1]
Length = 241
Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 1/105 (0%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQF-WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
V + + + E + I + ++ DL + E LSF R V PF AI +D
Sbjct: 29 VVCPDFVVERHGESLIIDLDPEYPLDLAFTEVGVEADLSFGGFVTRCVFPFAAIYMIFDR 88
Query: 133 SVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQD 177
++FD + + + P
Sbjct: 89 ETGRGMKFDAAMPESVRRQQAAPKPAPKPKPRLVAVGDEGEPEPS 133
>gi|321472941|gb|EFX83910.1| hypothetical protein DAPPUDRAFT_239439 [Daphnia pulex]
Length = 273
Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 29 HIRYDILAKEALRGLVKVVLSEVASIGSLPGEHHFYIT 66
I Y+ L +EA+RG+V+ +L EV+ +G L +HFY+T
Sbjct: 237 TIDYEELVQEAMRGVVRRILQEVSKMG-LEDPNHFYVT 273
>gi|162456885|ref|YP_001619252.1| hypothetical protein sce8602 [Sorangium cellulosum 'So ce 56']
gi|161167467|emb|CAN98772.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 242
Score = 52.6 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 37/135 (27%), Gaps = 13/135 (9%)
Query: 64 YITFATNARGVRISQNLRKNYPE-------KMTIVIQNQFWDLKVLDNHFEVGLSFSNVP 116
+I GV + + P+ M I I DLKV D+ LSF+ P
Sbjct: 26 FIHLDPRRPGVSVPKWFTGQ-PQLILQVGMNMAIAIP----DLKVDDDGISCTLSFNRAP 80
Query: 117 ERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ 176
+P++AI + + I + +
Sbjct: 81 FWCRLPWHAIWALV-SEDQRGMVWPEDIPADLAAQKQQRPAVAPPQKPAKRPRPRLAAVA 139
Query: 177 DSSKKKSTKKQNKNK 191
S + ++
Sbjct: 140 PPSGDDERSDEAADE 154
>gi|23009802|ref|ZP_00050715.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Magnetospirillum magnetotacticum MS-1]
Length = 104
Score = 51.4 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 151 LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
G L + ++ + + SK ++ +K +++ A V+SLD FRKK
Sbjct: 50 QGGAKIVPALPAVGKPKQDDASEGAAGESKPEAAEKGDRDGTAEVVSLDAFRKK 103
>gi|92114326|ref|YP_574254.1| stringent starvation protein B [Chromohalobacter salexigens DSM
3043]
gi|91797416|gb|ABE59555.1| Stringent starvation protein B [Chromohalobacter salexigens DSM
3043]
Length = 160
Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 39/133 (29%), Gaps = 7/133 (5%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLV 120
YI GV + + Y + IV+ + DL + + G FS P +++
Sbjct: 24 YIVVDAEQDGVSVPR----QYVQNGQIVLNIAPSAVRDLYIENAAVTFGARFSGQPMQVI 79
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
+P A+ Y + F E + E + S++ +
Sbjct: 80 VPMEALIALYARENGVGMVFGHEPVMPEAENESTGEEAQEQEGSRPALESVEAPSEEDAD 139
Query: 181 KKSTKKQNKNKMA 193
+
Sbjct: 140 SGDQDDEAPRTKG 152
>gi|241668190|ref|ZP_04755768.1| ClpXP protease specificity-enhancing factor [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254876725|ref|ZP_05249435.1| macrophage growth locus subunit B mglB [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254842746|gb|EET21160.1| macrophage growth locus subunit B mglB [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 135
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
+VK + + G P YI T GV + N + + + +L++
Sbjct: 8 VVKATYNWLVDHGFTP-----YILVDTEYEGVVVPNNYIDEDNKILLDLSPQAIQNLEID 62
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVN---FELEFDVHIEHIEEKLEGGNTGKV 159
DNH +F P + IP ++ + + EF I E + + K
Sbjct: 63 DNHISFDATFDGEPMSINIPIESVLEVFSKETEQGMYAREFGYGININEGEDDEAVNPKK 122
Query: 160 LTS 162
L
Sbjct: 123 LGE 125
>gi|262195422|ref|YP_003266631.1| hypothetical protein Hoch_2193 [Haliangium ochraceum DSM 14365]
gi|262078769|gb|ACY14738.1| hypothetical protein Hoch_2193 [Haliangium ochraceum DSM 14365]
Length = 252
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 10/123 (8%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFW------DLKVLDNHFEVGLSFSNVPERLVI 121
T + + R +V++ + D + D L+F P V+
Sbjct: 123 DTRVPSASVPEQFRGQ----ARLVLRFGYRLSPPIVDFSIDDIGIHGTLTFGGKPFACVV 178
Query: 122 PFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
P++A+ S + + + G G + + Q ++ K
Sbjct: 179 PWSALYAVVAESNGQGTVWPEDVPDEILEELGLAGGTEDGGAADSGEPQQVPSAEPEPPK 238
Query: 182 KST 184
ST
Sbjct: 239 SST 241
>gi|167627622|ref|YP_001678122.1| ClpXP protease specificity-enhancing factor [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167597623|gb|ABZ87621.1| macrophage growth locus, subunit B [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 135
Score = 44.5 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
+VK + + G P YI T GV + N + + + +L++
Sbjct: 8 VVKATYNWLVDHGFTP-----YILVDTEYEGVVVPNNYIDEDNKILLDLSPQAIQNLEID 62
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVN---FELEFDVHIEHIEEKLEGGNTGKV 159
DNH +F P + IP ++ + + EF I E + + K
Sbjct: 63 DNHISFDATFDGEPISINIPIESVLEVFSKETEQGMYAREFGYGININEGEDDEAVNPKK 122
Query: 160 LTS 162
L
Sbjct: 123 LGE 125
>gi|188025679|ref|ZP_02959433.2| hypothetical protein PROSTU_01288 [Providencia stuartii ATCC 25827]
gi|188022711|gb|EDU60751.1| hypothetical protein PROSTU_01288 [Providencia stuartii ATCC 25827]
Length = 164
Score = 43.7 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 31/94 (32%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+ ++ ++ F VP ++ +P AI Y + F+ + E+
Sbjct: 63 NFEITNDEVRFNARFGGVPRQVYVPMAAIIAIYSRENGAGMMFEPETAYEEQLSGEPEVV 122
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
+ + + +++ S +S+
Sbjct: 123 EDNPADNIMLVHESEPTSDESTASDDEPTPPPKG 156
>gi|88704085|ref|ZP_01101800.1| Stringent starvation protein B [Congregibacter litoralis KT71]
gi|88701912|gb|EAQ99016.1| Stringent starvation protein B [Congregibacter litoralis KT71]
Length = 131
Score = 43.7 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 7/95 (7%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFN 124
A GV + + Y + IV+ +L++ D+ F P + +P
Sbjct: 28 DATAPGVDVP----EEYVKDGQIVLNLSPSAVIELQLADDCVSFNGRFGGKPTDVFMPMA 83
Query: 125 AIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKV 159
AI G Y + F+ + EGGN
Sbjct: 84 AILGIYARENGQGMAFEPEEGDDDPTPEGGNEPTP 118
>gi|238796203|ref|ZP_04639713.1| Stringent starvation protein B [Yersinia mollaretii ATCC 43969]
gi|238719896|gb|EEQ11702.1| Stringent starvation protein B [Yersinia mollaretii ATCC 43969]
Length = 169
Score = 43.4 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 4/125 (3%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V DL++ ++ F VP ++ +P AI Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGDLELGNDGVSFNARFGGVPRQVSVPMAAIIAIYA 95
Query: 132 PSVNFELEFDV---HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
F+ + +E EG G + + SQD + +
Sbjct: 96 RENGSGTLFEPEEAYDSDVEGDSEGIEEGNSAPTDNLMLVTGETPSSQDDNALPDDEPPQ 155
Query: 189 KNKMA 193
+
Sbjct: 156 PPRSG 160
>gi|284008704|emb|CBA75376.1| stringent starvation protein B [Arsenophonus nasoniae]
Length = 163
Score = 43.4 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 27/94 (28%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + F VP R+ +P AI Y + F+ E+ +
Sbjct: 62 NLELTNEIVSFSARFGGVPRRVEVPMCAIIAIYGRENGAGMMFEPEPEYESGSGDSVAKS 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
+ L + + + S
Sbjct: 122 ENLVLISDTELSNEAQEITSISSSDDEPPTPPKG 155
>gi|289624967|ref|ZP_06457921.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. aesculi str. NCPPB3681]
gi|330868700|gb|EGH03409.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330888590|gb|EGH21251.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. mori str. 301020]
Length = 136
Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 8/106 (7%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
+ V++ + + IV+ + L + + F VP L +P AI
Sbjct: 30 DYPSVQVP----QGFANDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVPHTLYVPVAAI 85
Query: 127 KGFYDPSVNFELEFDVHIE-HIEEKLEGGNTGKVLTSPDNFDKNQT 171
G Y + FD+ E++E + + P +
Sbjct: 86 LGIYARENGQGMVFDLEPSMDDGEEIEIEDDTPPDSEPPRPSGRPS 131
>gi|127511508|ref|YP_001092705.1| ClpXP protease specificity-enhancing factor [Shewanella loihica
PV-4]
gi|126636803|gb|ABO22446.1| Stringent starvation protein B [Shewanella loihica PV-4]
Length = 152
Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 7/113 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ + Y + IV+ + +L++ + E F VP+++V+P +I
Sbjct: 35 PGTQVP----QQYVKDGQIVLNITASAVGNLQIGHDFIEFNARFGGVPQQVVLPMASIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
Y FD + E V+ P + + +++ K
Sbjct: 91 IYARENGAGTVFDQEEAYQLEADARDLGLSVVDEPKTDEPAVAEASAENDKPK 143
>gi|85058197|ref|YP_453899.1| ClpXP protease specificity-enhancing factor [Sodalis glossinidius
str. 'morsitans']
gi|84778717|dbj|BAE73494.1| stringent starvation protein B [Sodalis glossinidius str.
'morsitans']
Length = 166
Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 33/96 (34%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L + ++ + F VP+++V+P A+ Y F+ + + + L ++
Sbjct: 62 NLTLDNDDVQFNARFGGVPQQVVVPMAAVLAIYARENGAGTMFEPEVAYEQLTLADDDSA 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + + K + +
Sbjct: 122 EEPATETVMSVIDVDWPDNAQADDPEDKPPSPPRGG 157
>gi|123443921|ref|YP_001007892.1| ClpXP protease specificity-enhancing factor [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122090882|emb|CAL13764.1| putative stringent starvation protein B [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 171
Score = 43.0 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 32/128 (25%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ + F +P + +P A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVANLELGNEGVSFNARFGGIPCEVTVPMGAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + E + T + T + D
Sbjct: 96 RENGSGTMFEPEEAYDSDADGNFVGMEEEDDETTPTENLMLVTDDTQAPQGDGGSPDDEP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSGG 163
>gi|256113958|ref|ZP_05454741.1| hypothetical protein Bmelb3E_14335 [Brucella melitensis bv. 3 str.
Ether]
Length = 76
Score = 43.0 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 19/62 (30%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + + S+++ + + A V+SLD FR
Sbjct: 15 EGNISPIEEMAPEKADKPKAKTRKPAAGKKESASTDSEQEDGEDKAPKPTADVVSLDAFR 74
Query: 203 KK 204
KK
Sbjct: 75 KK 76
>gi|289647025|ref|ZP_06478368.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. aesculi str. 2250]
Length = 136
Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 4/104 (3%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ-NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
+ V++ Q ++ + + + L + + F VP L +P AI G
Sbjct: 30 DYPSVQVPQGFANG--GQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVPHTLYVPVAAILG 87
Query: 129 FYDPSVNFELEFDVHIE-HIEEKLEGGNTGKVLTSPDNFDKNQT 171
Y + FD+ E++E + + P +
Sbjct: 88 IYARENGQGMVFDLEPSMDDGEEIEIEDDTPPDSEPPRPSGRPS 131
>gi|330862738|emb|CBX72880.1| stringent starvation protein B [Yersinia enterocolitica W22703]
Length = 171
Score = 42.6 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 32/128 (25%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ + F +P + +P A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVANLELGNEGVSFNARFGGIPCEVTVPMGAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + E + T + T D S
Sbjct: 96 RENGSGTMFEPEEAYDSDADGNFVGMEEEDDETTPTENLMLVTDDTQGPQGDGSSPDDEP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSGG 163
>gi|332163065|ref|YP_004299642.1| ClpXP protease specificity-enhancing factor [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318604055|emb|CBY25553.1| stringent starvation protein B [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667295|gb|ADZ43939.1| ClpXP protease specificity-enhancing factor [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 166
Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 32/128 (25%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ + F +P + +P A+ Y
Sbjct: 32 PGVSVPMEF-ARDGQIVLNVAPRAVANLELGNEGVSFNARFGGIPCEVTVPMGAVMAIYA 90
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + E + T + T D S
Sbjct: 91 RENGSGTMFEPEEAYDSDADGNFVGMEEEDDETTPTENLMLVTDDTQGPQGDGSSPDDEP 150
Query: 186 KQNKNKMA 193
Q
Sbjct: 151 PQPPRSGG 158
>gi|307544537|ref|YP_003897016.1| stringent starvation protein B [Halomonas elongata DSM 2581]
gi|307216561|emb|CBV41831.1| K03600 stringent starvation protein B [Halomonas elongata DSM 2581]
Length = 159
Score = 42.6 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 36/132 (27%), Gaps = 7/132 (5%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLV 120
YI GV + + +N IV+ + DL + + F P +L+
Sbjct: 24 YIVVDAEQEGVEVPRQFVQNGQ----IVLNMGVSAIRDLSMENEAISFSARFGGKPTQLM 79
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
+P A+ Y + F + + + + +
Sbjct: 80 VPMEALIAIYARENGVGMVFGHEPVMPDVGHDESEAETGQDEAKGPTLASVDETEESEAS 139
Query: 181 KKSTKKQNKNKM 192
+ + K
Sbjct: 140 SSEREGETPRKG 151
>gi|212711103|ref|ZP_03319231.1| hypothetical protein PROVALCAL_02172 [Providencia alcalifaciens DSM
30120]
gi|212686271|gb|EEB45799.1| hypothetical protein PROVALCAL_02172 [Providencia alcalifaciens DSM
30120]
Length = 164
Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 28/95 (29%), Gaps = 1/95 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+ ++ + F VP ++ +P AI Y + F+ +E +G +
Sbjct: 63 NFEITNEEVRFNARFGGVPRQVYVPMAAIMAVYARENGAGMMFE-PEAAYDEHFDGEDDA 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
T DN + + K
Sbjct: 122 ADETLSDNIVLVHDEVPQTEEPSSPDDEPPRPPKG 156
>gi|148980574|ref|ZP_01816121.1| ClpXP protease specificity-enhancing factor [Vibrionales bacterium
SWAT-3]
gi|145961157|gb|EDK26473.1| ClpXP protease specificity-enhancing factor [Vibrionales bacterium
SWAT-3]
Length = 159
Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 1/121 (0%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GVR+ + ++ + I + L++ + FS P +++P A++ Y
Sbjct: 32 PGVRVPEEFVQDGQIILNIAPRA-VGQLELGNEAVTFSARFSGRPHSVIVPLYAVQAIYA 90
Query: 132 PSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
F+ ++E EG G + + + + K
Sbjct: 91 RENGAGTMFEPEEAYMESFEEGIEEGPFEEPEKGPSLSVATAEPEAEEPDSDPEPPRPAK 150
Query: 192 M 192
Sbjct: 151 G 151
>gi|90022801|ref|YP_528628.1| ClpXP protease specificity-enhancing factor [Saccharophagus
degradans 2-40]
gi|89952401|gb|ABD82416.1| Stringent starvation protein B [Saccharophagus degradans 2-40]
Length = 133
Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 28/93 (30%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGF 129
+A V + Q + + + L + + F VP L +P A+ G
Sbjct: 32 HAPNVEVPQEYVNKDGQIVLNIAPRAVEGLDLGNKAISFQARFGGVPTHLYVPCQAVLGI 91
Query: 130 YDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTS 162
Y + FD+ + ++
Sbjct: 92 YARENGQGMMFDLESNPEPDPDPAPVEPDPKSA 124
>gi|282599964|ref|ZP_05972527.2| stringent starvation protein B [Providencia rustigianii DSM 4541]
gi|282567021|gb|EFB72556.1| stringent starvation protein B [Providencia rustigianii DSM 4541]
Length = 164
Score = 42.6 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 31/94 (32%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+ ++ + F VP ++ +P AI Y + F+ + E E +
Sbjct: 63 NFEITNEEVRFNARFGGVPRQVYVPMAAIMAVYARENGAGMMFEPEAAYDEHFSEENDIT 122
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
+ + + ++ + +SS +
Sbjct: 123 DETPADNIILVHDESAQTDESSTPDDEPPRPPKG 156
>gi|317494020|ref|ZP_07952436.1| stringent starvation protein B [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917793|gb|EFV39136.1| stringent starvation protein B [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 165
Score = 42.6 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 27/96 (28%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ D+ F VP + +P +A+ Y F+ + E
Sbjct: 62 NLELGDDAVRFNARFGGVPRNVYVPISAVMAIYSRENGAGTMFEPEPAYENEMPLMSVED 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ +S + N + +
Sbjct: 122 EEASSEPSMTVIDGNLPDSSTESDDDGDEPTPPPRG 157
>gi|294634677|ref|ZP_06713210.1| stringent starvation protein B [Edwardsiella tarda ATCC 23685]
gi|291091923|gb|EFE24484.1| stringent starvation protein B [Edwardsiella tarda ATCC 23685]
Length = 162
Score = 42.6 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 30/98 (30%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ D+ F VP ++ +P A+ Y F+ + ++
Sbjct: 64 LELADDAVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFEPEAAYDQDAELAQVAES 123
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ + S+ +D + T V+
Sbjct: 124 DEEPAMTLIEGEGPSIEEDDGGDEPTPPPRGRPALRVV 161
>gi|253686700|ref|YP_003015890.1| Stringent starvation protein B [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753278|gb|ACT11354.1| Stringent starvation protein B [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 167
Score = 42.2 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 7/131 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + ++ + I + L++ D+ F VP ++ +P A+ Y
Sbjct: 37 PGVMVPMEFARDGQIVLNIAPRA-VGGLELADDSVRFNARFGGVPRQVYVPMAAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEK------LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + E EG +G V++ D+ ++ S +
Sbjct: 96 RENGAGTMFEPEPAYEESAGEFEDFQEGAPSGTVMSIVDSSPDSEAPDGGSGSDDEPPQP 155
Query: 186 KQNKNKMASVI 196
+ V+
Sbjct: 156 PKGGRPSLRVV 166
>gi|238918546|ref|YP_002932060.1| hypothetical protein NT01EI_0596 [Edwardsiella ictaluri 93-146]
gi|238868114|gb|ACR67825.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 158
Score = 42.2 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 28/93 (30%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ D+ F VP ++ +P A+ Y F+ + ++ E +
Sbjct: 58 LELADDAVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFEPEAAYEQDTDETRIEAE 117
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
P + ++ + +
Sbjct: 118 NDEPPMMLIDGDRSPDNKAPADDDGGDEPPPRG 150
>gi|238785112|ref|ZP_04629107.1| Stringent starvation protein B [Yersinia bercovieri ATCC 43970]
gi|238714004|gb|EEQ06021.1| Stringent starvation protein B [Yersinia bercovieri ATCC 43970]
Length = 171
Score = 41.8 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 36/128 (28%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ ++ F VP ++++P AI Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGNLELGNDGVSFNARFGGVPRQVIVPMAAIVAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDK------NQTNSVSQDSSKKKSTK 185
F+ + + + + ++T S D+
Sbjct: 96 RENGSGTMFEPEEAYDSDAEGNFEGIEEEEGNNAPADNLMLVTDETPSSQDDNGSPDDEP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSGG 163
>gi|330501909|ref|YP_004378778.1| ClpXP protease specificity-enhancing factor [Pseudomonas mendocina
NK-01]
gi|328916195|gb|AEB57026.1| ClpXP protease specificity-enhancing factor [Pseudomonas mendocina
NK-01]
Length = 137
Score = 41.8 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 7/106 (6%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQNQ---FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GV++ + IV+ + L + + F V L IP AI
Sbjct: 31 HPGVQVPS----GFASDGQIVLNSSPSAVRHLHMDNEAVSFEGRFGGVAHSLYIPTAAIL 86
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNS 173
Y + FD+ E G + + + S
Sbjct: 87 AIYARENGQGMVFDMEPPVAGGPEESGPDDDGPSGGEPPRPSGRPS 132
>gi|88799200|ref|ZP_01114779.1| stringent starvation protein B [Reinekea sp. MED297]
gi|88777959|gb|EAR09155.1| stringent starvation protein B [Reinekea sp. MED297]
Length = 133
Score = 41.8 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ-NQFWDLKVLDNHFEVGLSFSNVPERLVIP 122
YI F GV++ Q+ ++ ++T+ I DL++ ++ F VP +V P
Sbjct: 27 YIVFMAEYPGVQVPQDFVRD--GQITLNIAPTAVRDLQLANDVVSFNARFGGVPTDIVGP 84
Query: 123 FNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLT 161
+A+ + + F+V + +
Sbjct: 85 VDAVMAIFAKENGQGMGFEVEMPPEPPEGGSDEDQDSAP 123
>gi|167625532|ref|YP_001675826.1| ClpXP protease specificity-enhancing factor [Shewanella
halifaxensis HAW-EB4]
gi|167355554|gb|ABZ78167.1| Stringent starvation protein B [Shewanella halifaxensis HAW-EB4]
Length = 156
Score = 41.8 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVI---QNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ + Y + IV+ ++ L++ + E F VP+++++P +I
Sbjct: 35 PGTQVP----QQYVKDGQIVLNITESAVGGLQITNEFIEFSARFGGVPQQVLLPMASIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
Y F++ + + +G + + +T+ D+ + K +K
Sbjct: 91 IYARENGAGTVFELEEAYQLDDENEEESGLSVVLKEPEPVVETSEPEPDNVEAKESK 147
>gi|254509128|ref|ZP_05121228.1| stringent starvation protein B [Vibrio parahaemolyticus 16]
gi|219547925|gb|EED24950.1| stringent starvation protein B [Vibrio parahaemolyticus 16]
Length = 146
Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 4/125 (3%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GVR+ ++ + I + +L++ + F P +++P A++ Y
Sbjct: 25 PGVRVPDEFVQDGQIILNIAPRA-VGNLELGNEAITFNARFGGRPHSVIVPLYAVQAIYA 83
Query: 132 PSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
F+ +I E E +++ D + + + + ++ +
Sbjct: 84 RENGAGTMFEPEDAYIGEFEED---DEMIVEEDLSPLSVASESEDNDTGEEEPPRPKGRP 140
Query: 192 MASVI 196
V+
Sbjct: 141 SLRVV 145
>gi|238789740|ref|ZP_04633522.1| Stringent starvation protein B [Yersinia frederiksenii ATCC 33641]
gi|238722099|gb|EEQ13757.1| Stringent starvation protein B [Yersinia frederiksenii ATCC 33641]
Length = 171
Score = 41.4 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 32/128 (25%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ ++ F VP ++ +P A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGNLELGNDGVSFNARFGGVPRQVTVPMGAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + E T + T +
Sbjct: 96 RENGSGTMFEPEEAYDSDADGNFVGIEEEGIETASTESLTLVTDDTQAPEGGGHSPDDEP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSGG 163
>gi|298488520|ref|ZP_07006550.1| Stringent starvation protein B [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156861|gb|EFH97951.1| Stringent starvation protein B [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 136
Score = 41.4 bits (96), Expect = 0.080, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 8/106 (7%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
+ V++ + + IV+ + L + + F VP L +P AI
Sbjct: 30 DYPSVQVP----QGFANDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVPHTLYVPVAAI 85
Query: 127 KGFYDPSVNFELEFDVHIE-HIEEKLEGGNTGKVLTSPDNFDKNQT 171
G Y + FD+ E++E + + P +
Sbjct: 86 LGIYALENGQGMVFDLEPSMDDGEEIEIEDDTPPDSEPPRPSGRPS 131
>gi|84394624|ref|ZP_00993321.1| stringent starvation protein B [Vibrio splendidus 12B01]
gi|84374754|gb|EAP91704.1| stringent starvation protein B [Vibrio splendidus 12B01]
Length = 159
Score = 41.0 bits (95), Expect = 0.094, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 1/121 (0%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GVR+ + ++ + I + L++ + FS P +++P A++ Y
Sbjct: 32 PGVRVPEEFVQDGQIILNIAPRA-VGQLELGNEAVTFSARFSGRPHSVIVPLYAVQAIYA 90
Query: 132 PSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
F+ ++E EG + + + K
Sbjct: 91 RENGAGTMFEPEEAYMESFEEGIEESPFEEQEKGPSLSVATADVDAEEPDSDPEPPRPAK 150
Query: 192 M 192
Sbjct: 151 G 151
>gi|238764259|ref|ZP_04625211.1| Stringent starvation protein B [Yersinia kristensenii ATCC 33638]
gi|238697540|gb|EEP90305.1| Stringent starvation protein B [Yersinia kristensenii ATCC 33638]
Length = 171
Score = 41.0 bits (95), Expect = 0.100, Method: Composition-based stats.
Identities = 13/128 (10%), Positives = 32/128 (25%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ + F +P + +P A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGNLELGNEEVSFNARFGGIPREVTVPMGAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + E + T + + + +
Sbjct: 96 RENGSGTMFEPEEAYDSDADGNFVGIEEEDNATAPTENLMLVTDDAHVPHGEDNSPDDEP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSGG 163
>gi|33591509|ref|NP_879153.1| ClpXP protease specificity-enhancing factor [Bordetella pertussis
Tohama I]
gi|33603847|ref|NP_891407.1| ClpXP protease specificity-enhancing factor [Bordetella
bronchiseptica RB50]
gi|33571151|emb|CAE40652.1| stringent starvation protein B [Bordetella pertussis Tohama I]
gi|33577972|emb|CAE35237.1| stringent starvation protein B [Bordetella bronchiseptica RB50]
gi|332380904|gb|AEE65751.1| ClpXP protease specificity-enhancing factor [Bordetella pertussis
CS]
Length = 149
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 24/85 (28%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V E +
Sbjct: 59 LSLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGMGFEVQAYEAPEHADAAPPPP 118
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKS 183
+ + K+
Sbjct: 119 ESAEAGDAAASPAGDDGDGDEPKRP 143
>gi|291279665|ref|YP_003496500.1| hypothetical protein DEFDS_1277 [Deferribacter desulfuricans SSM1]
gi|290754367|dbj|BAI80744.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 136
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 63 FYITFATNARGVRISQNLRKNYPEK--MTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLV 120
FYI + V ++ L EK M + + + + D + V + FS V E L+
Sbjct: 20 FYIHIMPHKNLVIGNRGLIDQEKEKGLMLVFGPYSYKEFRWDDENIYVSMRFSGVWEYLI 79
Query: 121 IPFNAIKGFYD 131
IPF +I +D
Sbjct: 80 IPFESIVSVFD 90
>gi|33598773|ref|NP_886416.1| ClpXP protease specificity-enhancing factor [Bordetella
parapertussis 12822]
gi|33574903|emb|CAE39566.1| stringent starvation protein B [Bordetella parapertussis]
Length = 149
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 24/85 (28%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V E +
Sbjct: 59 LSLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGIGFEVQAYEAPEHADAATPPP 118
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKS 183
+ + K+
Sbjct: 119 ESAEAGDAAASPAGDDGDGDEPKRP 143
>gi|269137876|ref|YP_003294576.1| ClpXP protease specificity-enhancing factor [Edwardsiella tarda
EIB202]
gi|267983536|gb|ACY83365.1| ClpXP protease specificity-enhancing factor [Edwardsiella tarda
EIB202]
gi|304557929|gb|ADM40593.1| ClpXP protease specificity-enhancing factor / Stringent starvation
protein B [Edwardsiella tarda FL6-60]
Length = 163
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 10/93 (10%), Positives = 27/93 (29%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ D+ F VP ++ +P A+ Y F+ + ++ E +
Sbjct: 63 LELADDAVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFEPEAAYEQDGDETRAETE 122
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
+ ++ + +
Sbjct: 123 SDEPAMTLIDGDRSPDNEAPADDDGGDEPPPRG 155
>gi|227326656|ref|ZP_03830680.1| ClpXP protease specificity-enhancing factor [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 167
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI--EHIEEKLEGGNT 156
L++ D+ F VP ++ +P A+ Y F+ E E +
Sbjct: 63 LELADDSVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFESEPAYESAGEYEDFQEG 122
Query: 157 GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + +S + D + K
Sbjct: 123 APASGTVMSIVDSSPDSEAPDDGSGSDDEPPQPPKGG 159
>gi|208779942|ref|ZP_03247286.1| stringent starvation protein B [Francisella novicida FTG]
gi|208744397|gb|EDZ90697.1| stringent starvation protein B [Francisella novicida FTG]
Length = 135
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
+VK + + G P Y+ T GV + N + + + DL +
Sbjct: 8 VVKATYNWLVEHGFTP-----YVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLVID 62
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVN---FELEFDVHIEHIEEKLEGGNTGKV 159
DNH +F + P + IP A+ + + EF I E + + K
Sbjct: 63 DNHISFAATFDSEPMSINIPIEAVLEVFSKETEQGMYAREFGYGININEGEDDETANPKK 122
Query: 160 LTS 162
L
Sbjct: 123 LGE 125
>gi|332184410|gb|AEE26664.1| Stringent starvation protein B [Francisella cf. novicida 3523]
Length = 135
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 8/128 (6%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
+VK + + G P Y+ T GV + N + + + DL +
Sbjct: 8 VVKATYNWLVDHGFTP-----YVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLVID 62
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVN---FELEFDVHIEHIEEKLEGGNTGKV 159
DNH +F + P + IP A+ + + EF I E + +
Sbjct: 63 DNHISFAATFDSEPMSINIPIEAVLEVFSKETEQGMYAREFGYGININEGEDDETANPNK 122
Query: 160 LTSPDNFD 167
+ ++ +
Sbjct: 123 IGQANSGN 130
>gi|291287662|ref|YP_003504478.1| hypothetical protein Dacet_1758 [Denitrovibrio acetiphilus DSM
12809]
gi|290884822|gb|ADD68522.1| hypothetical protein Dacet_1758 [Denitrovibrio acetiphilus DSM
12809]
Length = 134
Score = 40.3 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 15/132 (11%)
Query: 36 AKEALRGLVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQN--LRKNYPEKMTIVI- 92
+ + + + +L FY+ + I L + +V
Sbjct: 1 MNQFRQNIFQEILKNYEK---------FYVHLMP-HPELIIGVRGLLGDENKNGLVLVFG 50
Query: 93 QNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG-FYDPSV-NFELEFDVHIEHIEEK 150
+ + L + + V + FS E L IP NA+ F DP F F + +
Sbjct: 51 PHSYDKLSLESDCITVNMKFSGSWESLYIPLNAVSAIFNDPVKPEFMFSFKPVVRTEGSE 110
Query: 151 LEGGNTGKVLTS 162
+ S
Sbjct: 111 ETVMDDPADNDS 122
>gi|237799275|ref|ZP_04587736.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|237806244|ref|ZP_04592948.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331022131|gb|EGI02188.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331027358|gb|EGI07413.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. oryzae str. 1_6]
Length = 136
Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 8/105 (7%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
V++ + + IV+ + L + + F VP L +P AI
Sbjct: 31 YPAVQVP----QGFANDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVPHTLFVPVAAIL 86
Query: 128 GFYDPSVNFELEFDVHIEHIE-EKLEGGNTGKVLTSPDNFDKNQT 171
G Y + FD+ E + +E + + P +
Sbjct: 87 GIYARENGQGMVFDLEPSMEEADDVEIEDDTPPDSEPPRPSGRPS 131
>gi|330957985|gb|EGH58245.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 138
Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVH---IEHIEEKLEG 153
L + + F VP L +P AI G Y + FD+ + E ++E
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPVAAILGIYARENGQGMVFDLEPSLEDGDEIEIEV 115
Query: 154 GNTGKVLTSPDNFDKNQT 171
+ + P +
Sbjct: 116 EDDTPPDSEPPRPSGRPS 133
>gi|238751341|ref|ZP_04612834.1| Stringent starvation protein B [Yersinia rohdei ATCC 43380]
gi|238710399|gb|EEQ02624.1| Stringent starvation protein B [Yersinia rohdei ATCC 43380]
Length = 171
Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 37/128 (28%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V DL++ ++ F VP ++++P +A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGDLELGNDGVCFNARFGGVPRQVIVPMSAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + E G + T +V + +
Sbjct: 96 RENGSGTMFEPEEAYDTDVDGNFVGIEEGGSETASTESLTLVTGDAPAVEGEGNSPDDEP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSGG 163
>gi|89256505|ref|YP_513867.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. holarctica LVS]
gi|115314937|ref|YP_763660.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. holarctica OSU18]
gi|156502615|ref|YP_001428681.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|167010471|ref|ZP_02275402.1| stringent starvation protein B [Francisella tularensis subsp.
holarctica FSC200]
gi|254367837|ref|ZP_04983857.1| macrophage growth locus, subunit B [Francisella tularensis subsp.
holarctica 257]
gi|290953974|ref|ZP_06558595.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. holarctica URFT1]
gi|295312651|ref|ZP_06803401.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. holarctica URFT1]
gi|89144336|emb|CAJ79623.1| macrophage growth locus, subunit B [Francisella tularensis subsp.
holarctica LVS]
gi|115129836|gb|ABI83023.1| macrophage growth locus protein subunit B [Francisella tularensis
subsp. holarctica OSU18]
gi|134253647|gb|EBA52741.1| macrophage growth locus, subunit B [Francisella tularensis subsp.
holarctica 257]
gi|156253218|gb|ABU61724.1| macrophage growth locus subunit B [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 135
Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
+VK + + G P Y+ T GV + N + + + DL +
Sbjct: 8 VVKATYNWLVDHGFTP-----YVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLVID 62
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVN---FELEFDVHIEHIEEKLEGGNTGKV 159
DNH +F + P + IP A+ + + EF I E + + K
Sbjct: 63 DNHISFAATFDSEPMSINIPIEAVLEVFSKETEQGMYAREFGYGININEGEDDENANPKK 122
Query: 160 LTS 162
L
Sbjct: 123 LGE 125
>gi|119776149|ref|YP_928889.1| ClpXP protease specificity-enhancing factor [Shewanella amazonensis
SB2B]
gi|119768649|gb|ABM01220.1| stringent starvation protein b [Shewanella amazonensis SB2B]
Length = 152
Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 32/84 (38%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
L++ ++ E F VP ++V+P +I Y FD ++ ++ E
Sbjct: 60 HLQLGNDAVEFNARFGGVPHQVVLPMASIVAIYARENGAGTVFDAEDAYLLDEGEDELLS 119
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKK 181
V + P+ + D S K
Sbjct: 120 VVESEPEEALTTEEPDGPDDPSPK 143
>gi|260914120|ref|ZP_05920593.1| stringent starvation protein B [Pasteurella dagmatis ATCC 43325]
gi|260631753|gb|EEX49931.1| stringent starvation protein B [Pasteurella dagmatis ATCC 43325]
Length = 153
Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 7/124 (5%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLV 120
Y+ GV++ Y + IV+ N +L++ ++ F VP+ +
Sbjct: 28 YLVVDATYFGVKVP----VEYVKDGQIVLNISTNATGNLQLTNDFIAFNARFRGVPQDIY 83
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
IP A Y + F+ + E + + K Q +Q + K
Sbjct: 84 IPMGAALAIYARENGDGVMFEPEEIYDELEKTMSEQPLSFAEAVDKPKTQPKPQAQSTEK 143
Query: 181 KKST 184
K +
Sbjct: 144 KAPS 147
>gi|162418866|ref|YP_001605677.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Angola]
gi|165937550|ref|ZP_02226113.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. IP275]
gi|167420535|ref|ZP_02312288.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|294505317|ref|YP_003569379.1| stringent starvation protein B [Yersinia pestis Z176003]
gi|162351681|gb|ABX85629.1| stringent starvation protein B [Yersinia pestis Angola]
gi|165914655|gb|EDR33269.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. IP275]
gi|166961341|gb|EDR57362.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|262367242|gb|ACY63799.1| stringent starvation protein B [Yersinia pestis D182038]
gi|294355776|gb|ADE66117.1| stringent starvation protein B [Yersinia pestis Z176003]
Length = 166
Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ ++ F VP ++ +P A+ Y
Sbjct: 32 PGVSVPMEF-ARDGQIVLNVAPRAVGNLELSNDDVRFNARFGGVPRQVTVPIAAVMAIYA 90
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + EG T + T D +
Sbjct: 91 RENGSGTMFEPEAAYDADADGNFEGIEGKENETAPTESLMLVTDDTRVEQDDDNSPDDKP 150
Query: 186 KQNKNKMA 193
Q
Sbjct: 151 PQPPRSGG 158
>gi|153949576|ref|YP_001399456.1| ClpXP protease specificity-enhancing factor [Yersinia
pseudotuberculosis IP 31758]
gi|152961071|gb|ABS48532.1| stringent starvation protein B [Yersinia pseudotuberculosis IP
31758]
Length = 171
Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ ++ F VP ++ +P A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGNLELSNDDVRFNARFGGVPRQVTVPIAAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + EG T + T D +
Sbjct: 96 RENGSGTMFEPEAAYDSDADGNFEGIEGKENETAPTESLMLVTDDTRVEQDDDNSPDDKP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSGG 163
>gi|56708336|ref|YP_170232.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110670807|ref|YP_667364.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. tularensis FSC198]
gi|118497876|ref|YP_898926.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. novicida U112]
gi|134301625|ref|YP_001121593.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. tularensis WY96-3418]
gi|187931767|ref|YP_001891752.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. mediasiatica FSC147]
gi|194323850|ref|ZP_03057626.1| stringent starvation protein B [Francisella tularensis subsp.
novicida FTE]
gi|224457460|ref|ZP_03665933.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254369604|ref|ZP_04985615.1| macrophage growth locus [Francisella tularensis subsp. holarctica
FSC022]
gi|254370958|ref|ZP_04986962.1| macrophage growth locus [Francisella tularensis subsp. tularensis
FSC033]
gi|254373230|ref|ZP_04988719.1| macrophage growth locus [Francisella tularensis subsp. novicida
GA99-3549]
gi|254875158|ref|ZP_05247868.1| mglB, macrophage growth locus subunit subunit B [Francisella
tularensis subsp. tularensis MA00-2987]
gi|2895891|gb|AAC29033.1| macrophage growth locus B [Francisella novicida U112]
gi|54114255|gb|AAV29761.1| NT02FT0228 [synthetic construct]
gi|56604828|emb|CAG45909.1| macrophage growth locus, subunit B [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110321140|emb|CAL09292.1| macrophage growth locus, subunit B [Francisella tularensis subsp.
tularensis FSC198]
gi|118423782|gb|ABK90172.1| macrophage growth locus, subunit B [Francisella novicida U112]
gi|134049402|gb|ABO46473.1| macrophage growth locus subunit B [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151569200|gb|EDN34854.1| macrophage growth locus [Francisella tularensis subsp. tularensis
FSC033]
gi|151570957|gb|EDN36611.1| macrophage growth locus [Francisella novicida GA99-3549]
gi|157122558|gb|EDO66693.1| macrophage growth locus [Francisella tularensis subsp. holarctica
FSC022]
gi|187712676|gb|ACD30973.1| macrophage growth locus, subunit B [Francisella tularensis subsp.
mediasiatica FSC147]
gi|194322214|gb|EDX19696.1| stringent starvation protein B [Francisella tularensis subsp.
novicida FTE]
gi|254841157|gb|EET19593.1| mglB, macrophage growth locus subunit subunit B [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282159573|gb|ADA78964.1| ClpXP protease specificity-enhancing factor [Francisella tularensis
subsp. tularensis NE061598]
Length = 135
Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
+VK + + G P Y+ T GV + N + + + DL +
Sbjct: 8 VVKATYNWLVDHGFTP-----YVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLVID 62
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVN---FELEFDVHIEHIEEKLEGGNTGKV 159
DNH +F + P + IP A+ + + EF I E + + K
Sbjct: 63 DNHISFAATFDSEPMSINIPIEAVLEVFSKETEQGMYAREFGYGININEGEDDETANPKK 122
Query: 160 LTS 162
L
Sbjct: 123 LGE 125
>gi|86148526|ref|ZP_01066813.1| stringent starvation protein B [Vibrio sp. MED222]
gi|85833672|gb|EAQ51843.1| stringent starvation protein B [Vibrio sp. MED222]
Length = 159
Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 2/122 (1%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GVR+ ++ + I + L++ + FS P +++P A++ Y
Sbjct: 32 PGVRVPDEFVQDGQIILNIAPRA-VGQLELGNEAVTFSARFSGRPHSVIVPLYAVQAIYA 90
Query: 132 PSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
F+ E E E G P+ + D+ + S + ++
Sbjct: 91 RENGAGTMFE-PEEAYMEAFEEGIEESPFEEPEKGPSLSVATADVDAEESDSEPEPSRPA 149
Query: 192 MA 193
Sbjct: 150 KG 151
>gi|320157437|ref|YP_004189816.1| stringent starvation protein B [Vibrio vulnificus MO6-24/O]
gi|319932749|gb|ADV87613.1| stringent starvation protein B [Vibrio vulnificus MO6-24/O]
Length = 153
Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 1/117 (0%)
Query: 73 GVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
GVR+ Q ++ + I + +L++ ++ F P +++P A+ Y
Sbjct: 33 GVRVPQEFIQDGQIILNIAPRA-VGNLELGNDTISFNARFGGRPHSVIVPLYAVLAIYAR 91
Query: 133 SVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
F+ + + + Q + D + K +
Sbjct: 92 ENGAGTMFEPEEAYTSIPGAEQEEDDGIWLEEEHSAPQPSIDFDDEPEPPRPKGRPS 148
>gi|27364054|ref|NP_759582.1| ClpXP protease specificity-enhancing factor [Vibrio vulnificus
CMCP6]
gi|37678784|ref|NP_933393.1| ClpXP protease specificity-enhancing factor [Vibrio vulnificus
YJ016]
gi|27360172|gb|AAO09109.1| Stringent starvation protein B [Vibrio vulnificus CMCP6]
gi|37197525|dbj|BAC93364.1| stringent starvation protein B [Vibrio vulnificus YJ016]
Length = 158
Score = 39.9 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 1/117 (0%)
Query: 73 GVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
GVR+ Q ++ + I + +L++ ++ F P +++P A+ Y
Sbjct: 38 GVRVPQEFIQDGQIILNIAPRA-VGNLELGNDTISFNARFGGRPHSVIVPLYAVLAIYAR 96
Query: 133 SVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNK 189
F+ + + + Q + D + K +
Sbjct: 97 ENGAGTMFEPEEAYTSIPGAEQEEDDGIWLEEEHSAPQPSIDFDDEPEPPRPKGRPS 153
>gi|238793690|ref|ZP_04637312.1| Stringent starvation protein B [Yersinia intermedia ATCC 29909]
gi|238726931|gb|EEQ18463.1| Stringent starvation protein B [Yersinia intermedia ATCC 29909]
Length = 171
Score = 39.9 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 32/128 (25%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ ++ F VP ++ +P A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGNLELGNDEVSFNARFGGVPRQVTVPMAAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + E + T DS
Sbjct: 96 RENGSGTMFEPEEAYDSDVDGNFEAFEEEGSETASAENLTLVTGDTLVSQDDSHSPDDEP 155
Query: 186 KQNKNKMA 193
+
Sbjct: 156 PKPPRSGG 163
>gi|37527867|ref|NP_931212.1| ClpXP protease specificity-enhancing factor [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36787303|emb|CAE16384.1| Stringent starvation protein B [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 171
Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 7/102 (6%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEE-------K 150
+L++ ++ F VP R+ IP A+ Y + F+ + +E
Sbjct: 62 NLELTNDEVRFNARFGGVPRRVNIPMAAVIAIYGRENRAGMMFEPEAAYKDEYLFKSASD 121
Query: 151 LEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKM 192
+ +T T + +S + +
Sbjct: 122 QDKADTSAFATDNLVLVTDTLPDAEDNSGTSPDDEPPKPTRG 163
>gi|22124051|ref|NP_667474.1| ClpXP protease specificity-enhancing factor [Yersinia pestis KIM
10]
gi|45443545|ref|NP_995084.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Microtus str. 91001]
gi|51597797|ref|YP_071988.1| ClpXP protease specificity-enhancing factor [Yersinia
pseudotuberculosis IP 32953]
gi|108809734|ref|YP_653650.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Antiqua]
gi|108813602|ref|YP_649369.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Nepal516]
gi|145597653|ref|YP_001161729.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Pestoides F]
gi|153997335|ref|ZP_02022435.1| putative stringent starvation protein B [Yersinia pestis CA88-4125]
gi|165928136|ref|ZP_02223968.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. F1991016]
gi|166011328|ref|ZP_02232226.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212232|ref|ZP_02238267.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400524|ref|ZP_02306033.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167426968|ref|ZP_02318721.1| stringent starvation protein B [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469335|ref|ZP_02334039.1| ClpXP protease specificity-enhancing factor [Yersinia pestis FV-1]
gi|170022778|ref|YP_001719283.1| ClpXP protease specificity-enhancing factor [Yersinia
pseudotuberculosis YPIII]
gi|186896988|ref|YP_001874100.1| ClpXP protease specificity-enhancing factor [Yersinia
pseudotuberculosis PB1/+]
gi|218930572|ref|YP_002348447.1| ClpXP protease specificity-enhancing factor [Yersinia pestis CO92]
gi|229837080|ref|ZP_04457245.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Pestoides A]
gi|229839216|ref|ZP_04459375.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229899781|ref|ZP_04514922.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904096|ref|ZP_04519207.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Nepal516]
gi|270488530|ref|ZP_06205604.1| stringent starvation protein B [Yersinia pestis KIM D27]
gi|21956797|gb|AAM83725.1|AE013613_5 stringent starvation protein B [Yersinia pestis KIM 10]
gi|45438414|gb|AAS63961.1| putative stringent starvation protein B [Yersinia pestis biovar
Microtus str. 91001]
gi|51591079|emb|CAH22743.1| putative stringent starvation protein B [Yersinia
pseudotuberculosis IP 32953]
gi|108777250|gb|ABG19769.1| stringent starvation protein B [Yersinia pestis Nepal516]
gi|108781647|gb|ABG15705.1| putative stringent starvation protein B [Yersinia pestis Antiqua]
gi|115349183|emb|CAL22148.1| putative stringent starvation protein B [Yersinia pestis CO92]
gi|145209349|gb|ABP38756.1| stringent starvation protein B [Yersinia pestis Pestoides F]
gi|149288972|gb|EDM39052.1| putative stringent starvation protein B [Yersinia pestis CA88-4125]
gi|165919910|gb|EDR37211.1| stringent starvation protein B [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989712|gb|EDR42013.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206978|gb|EDR51458.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167049892|gb|EDR61300.1| stringent starvation protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054008|gb|EDR63836.1| stringent starvation protein B [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749312|gb|ACA66830.1| Stringent starvation protein B [Yersinia pseudotuberculosis YPIII]
gi|186700014|gb|ACC90643.1| Stringent starvation protein B [Yersinia pseudotuberculosis PB1/+]
gi|229678214|gb|EEO74319.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Nepal516]
gi|229687273|gb|EEO79348.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695582|gb|EEO85629.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706023|gb|EEO92032.1| ClpXP protease specificity-enhancing factor [Yersinia pestis
Pestoides A]
gi|262363380|gb|ACY60101.1| putative stringent starvation protein B [Yersinia pestis D106004]
gi|270337034|gb|EFA47811.1| stringent starvation protein B [Yersinia pestis KIM D27]
gi|320017102|gb|ADW00674.1| ClpXP protease specificity-enhancing factor [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 171
Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ ++ F VP ++ +P A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGNLELSNDDVRFNARFGGVPRQVTVPIAAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + EG T + T D +
Sbjct: 96 RENGSGTMFEPEAAYDADADGNFEGIEGKENETAPTESLMLVTDDTRVEQDDDNSPDDKP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSGG 163
>gi|218708472|ref|YP_002416093.1| ClpXP protease specificity-enhancing factor [Vibrio splendidus
LGP32]
gi|218321491|emb|CAV17443.1| SspB [Vibrio splendidus LGP32]
Length = 164
Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 2/122 (1%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GVR+ ++ + I + L++ + FS P +++P A++ Y
Sbjct: 37 PGVRVPDEFVQDGQIILNIAPRA-VGQLELGNEAVTFSARFSGRPHSVIVPLYAVQAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
F+ E E E G P+ + D+ + S + ++
Sbjct: 96 RENGAGTMFE-PEEAYMEAFEEGIEESPFEEPEKGPSLSVATADVDAEESDSEPEPSRPA 154
Query: 192 MA 193
Sbjct: 155 KG 156
>gi|307944867|ref|ZP_07660204.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307771791|gb|EFO31015.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 43
Score = 39.9 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 12/41 (29%)
Query: 164 DNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFRKK 204
+ + T V+SLD FRKK
Sbjct: 2 SANSDVDPGGSETANKQDTDTDTDTSEGGGEVVSLDAFRKK 42
>gi|300313331|ref|YP_003777423.1| stringent starvation B protein [Herbaspirillum seropedicae SmR1]
gi|300076116|gb|ADJ65515.1| stringent starvation B protein [Herbaspirillum seropedicae SmR1]
Length = 165
Score = 39.5 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 7/111 (6%)
Query: 90 IVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
IV+ F LK+ +++ F V ++IP + Y + F+
Sbjct: 47 IVLNISFEATSGLKMENDNIHFSARFGGVSRDILIPVENVIAIYARENGQGMAFEAPAPA 106
Query: 147 IE----EKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
E + ++ S DS +K + K
Sbjct: 107 TAEAVQESDAPQEPESSAPVLSSVPVSEPEKKSADSEEKGDDDPEPPKKGG 157
>gi|212633672|ref|YP_002310197.1| ClpXP protease specificity-enhancing factor [Shewanella
piezotolerans WP3]
gi|212555156|gb|ACJ27610.1| Stringent starvation protein b [Shewanella piezotolerans WP3]
Length = 151
Score = 39.5 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 7/112 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVI---QNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ + Y + IV+ ++ L++ + E F VP+++++P AI
Sbjct: 35 PGTQVP----QQYVKDGQIVLNITESAVGGLQITNEFIEFSARFGGVPQQVLLPMAAIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
Y FDV + E E V + + K
Sbjct: 91 IYARENGAGTVFDVEEAYQLEDTEEAGLSVVEEPVAEVSEPEEIKEEVKEPK 142
>gi|294139264|ref|YP_003555242.1| stringent starvation protein B [Shewanella violacea DSS12]
gi|293325733|dbj|BAJ00464.1| stringent starvation protein B [Shewanella violacea DSS12]
Length = 172
Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 8/126 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ + Y + IV+ +L++ + E F VP+++V+P AI
Sbjct: 35 PGTQVP----QQYVKDGQIVLNITSTAVSNLQIGHDFIEFNARFGGVPQQVVLPMAAIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
Y FD+ + + E G + P+ S S +
Sbjct: 91 IYARENGAGTVFDM-EDAYKLDGESAEAGLSVVKPEEASVAGLKSPLSSVESSPSETPKF 149
Query: 189 KNKMAS 194
++
Sbjct: 150 ESSADK 155
>gi|254374686|ref|ZP_04990167.1| macrophage growth locus protein subunit B [Francisella novicida
GA99-3548]
gi|151572405|gb|EDN38059.1| macrophage growth locus protein subunit B [Francisella novicida
GA99-3548]
gi|332678591|gb|AEE87720.1| Stringent starvation protein B [Francisella cf. novicida Fx1]
Length = 135
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
+VK + + G P Y+ T GV + N + + + DL +
Sbjct: 8 VVKATYNWLVDHGFTP-----YVLVDTEYEGVIVPANYIDEDKKILLDLSPQAIQDLVID 62
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVN---FELEFDVHIEHIEEKLEGGNTGKV 159
DNH +F + P + IP A+ + + EF I E + + K
Sbjct: 63 DNHISFAATFDSDPMSINIPIEAVLEVFSKETEQGMYAREFGYGININEGEDDETANPKK 122
Query: 160 LTS 162
L
Sbjct: 123 LGE 125
>gi|319761623|ref|YP_004125560.1| stringent starvation protein b [Alicycliphilus denitrificans BC]
gi|330823489|ref|YP_004386792.1| Stringent starvation protein B [Alicycliphilus denitrificans K601]
gi|317116184|gb|ADU98672.1| Stringent starvation protein B [Alicycliphilus denitrificans BC]
gi|329308861|gb|AEB83276.1| Stringent starvation protein B [Alicycliphilus denitrificans K601]
Length = 174
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 9/121 (7%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V++ ++ Y IV+ + L++ ++ E F P L+IP + + Y
Sbjct: 39 VQVPRD----YVNNGEIVLNVSYEATSGLQLGNDFIEFKARFGGKPCDLLIPVHRVIAIY 94
Query: 131 DPSVNFELEFDVHIE--HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
+ F + E + G V P ++ S D S + K
Sbjct: 95 ARENGQGMAFPLDEEGGEKADVAPPRPAGVVAAPPAGAERAPVQLQSIDGSAGEGADKDA 154
Query: 189 K 189
Sbjct: 155 P 155
>gi|91794545|ref|YP_564196.1| ClpXP protease specificity-enhancing factor [Shewanella
denitrificans OS217]
gi|91716547|gb|ABE56473.1| Stringent starvation protein B [Shewanella denitrificans OS217]
Length = 152
Score = 39.1 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L + ++ E F VP+++V+P AI Y FD+ ++ E +
Sbjct: 60 NLHIGNDFVEFNARFGGVPQQVVVPLAAIVAIYARENGAGTVFDMEDAYMIESDLDQLSS 119
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKST 184
D + + K+ +
Sbjct: 120 VAPALSGVKDTKSDEAKKTSETTKRPS 146
>gi|254515256|ref|ZP_05127317.1| stringent starvation protein B [gamma proteobacterium NOR5-3]
gi|219677499|gb|EED33864.1| stringent starvation protein B [gamma proteobacterium NOR5-3]
Length = 131
Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV + Q+ Y + IV+ +L++ D+ F P + +P +AI G
Sbjct: 32 PGVDVPQD----YVKDGQIVLNLSPSAVIELQLADDCVSFNGRFGGKPTDVFMPMSAILG 87
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFD 167
Y + F+ + EGG+
Sbjct: 88 IYARENGQGMAFEPEEDDGGPAPEGGSEPTPFRRAGKPS 126
>gi|261819656|ref|YP_003257762.1| ClpXP protease specificity-enhancing factor [Pectobacterium
wasabiae WPP163]
gi|261603669|gb|ACX86155.1| Stringent starvation protein B [Pectobacterium wasabiae WPP163]
Length = 167
Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 2/97 (2%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI--EHIEEKLEGGNT 156
L++ D+ F VP ++ +P A+ Y F+ E E +
Sbjct: 63 LELADDSVRFNARFGGVPRQVHVPMAAVMAIYARENGAGTMFESEPAYEGAGEYEDFQEG 122
Query: 157 GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + +S + + S + K
Sbjct: 123 APASGTVMSIVDSSPDSEALEDSSGSDDEPPQPPKGG 159
>gi|227112759|ref|ZP_03826415.1| ClpXP protease specificity-enhancing factor [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 167
Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI--EHIEEKLEGGNT 156
L++ D+ F VP ++ +P A+ Y F+ E E +
Sbjct: 63 LELADDSVRFNARFGGVPRQVYVPMAAVMAIYARENGAGTMFESEPAYESAGEYEDFQEG 122
Query: 157 GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + +S + + K
Sbjct: 123 VPASGTVMSIVDSSPDSEAPGDGSDSDDEPPQPPKGG 159
>gi|170728487|ref|YP_001762513.1| ClpXP protease specificity-enhancing factor [Shewanella woodyi ATCC
51908]
gi|169813834|gb|ACA88418.1| Stringent starvation protein B [Shewanella woodyi ATCC 51908]
Length = 154
Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ + Y + IV+ + +L++ + E F VP+++V+P +I
Sbjct: 35 PGTQVP----QQYVKDGQIVLNITSSAVGNLQIGHEYIEFNARFGGVPQQVVLPMASIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKS 183
Y FDV + E E + V+ ++ D + +
Sbjct: 91 IYARENGAGTVFDVEEAYQLEDDEFESGLSVVEEAEDEDVVIEAVDETPKTSEPK 145
>gi|108759065|ref|YP_630287.1| hypothetical protein MXAN_2058 [Myxococcus xanthus DK 1622]
gi|108462945|gb|ABF88130.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 172
Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 7/133 (5%)
Query: 65 ITFATNARGVRISQNLRKNYPEKMTIVIQNQFW--DLKVLDNHFEVGLSFSNVPERLVIP 122
I GV + +++ + + + +F DL V + LSFS + +P
Sbjct: 24 IHLDARRPGVLVPASVKTE--AHLRLNLSYRFDPPDLTVGEWGVRSTLSFSGSRFTIAVP 81
Query: 123 FNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
++A+ F S + EF ++ E + +L P + + ++
Sbjct: 82 WSAL--FAIAS-HVTKEFWMYPEDMPPELLQQTAASRPAQPLPVAPVPVAAERPRTFLRE 138
Query: 183 STKKQNKNKMASV 195
++ A V
Sbjct: 139 VQGERRDEPPADV 151
>gi|157963346|ref|YP_001503380.1| ClpXP protease specificity-enhancing factor [Shewanella pealeana
ATCC 700345]
gi|157848346|gb|ABV88845.1| Stringent starvation protein B [Shewanella pealeana ATCC 700345]
Length = 153
Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVI---QNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ + Y + IV+ ++ L++ + E F VP+++++P +I
Sbjct: 35 PGTQVP----QQYVKDGQIVLNITESAVAGLQITNEFIEFSARFGGVPQQVLLPMASIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKK 182
Y F++ + + G + + ++ + ++ + K
Sbjct: 91 IYARENGAGTVFELEEAYQLDDDFEEEAGLSVVKEPVVETSEPEAEKVEAKEPK 144
>gi|300718624|ref|YP_003743427.1| Stringent starvation protein B [Erwinia billingiae Eb661]
gi|299064460|emb|CAX61580.1| Stringent starvation protein B [Erwinia billingiae Eb661]
Length = 166
Score = 39.1 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 8/112 (7%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
N GV + Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 35 NLPGVMVP----LEYARDGQIVLNIAPRAVGNLELGNDEVTFNARFGGVPRQVTVPLAAV 90
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDS 178
Y F+ EE E + +P+ DS
Sbjct: 91 MAIYARENGAGTMFE-PEPVYEEAGEYNPDSEQNDTPETVMSVIDGDRPDDS 141
>gi|322370145|ref|ZP_08044707.1| FAD linked oxidase domain protein [Haladaptatus paucihalophilus
DX253]
gi|320550481|gb|EFW92133.1| FAD linked oxidase domain protein [Haladaptatus paucihalophilus
DX253]
Length = 463
Score = 38.7 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 18/153 (11%), Positives = 46/153 (30%), Gaps = 27/153 (17%)
Query: 65 IT-FATNARGVRISQNLRKNYPEKMTIVIQNQFW-DLKVLDNHFEVGLSFSNVPERLVIP 122
IT F+ V + L ++YP + +W L + + ++ + ER +P
Sbjct: 296 ITDFSGTMPYVELQSMLDEDYPNG-----RYYYWKSLYIDELSDDIIDAIGGCAERCPVP 350
Query: 123 FNAI----------------KGFYDPSVNFELEFDVHIEHIEEKLEG----GNTGKVLTS 162
+ + F + L F+ + + + + +
Sbjct: 351 LSTVDVWQGGGALSRVGETETAFAHRDAPYGLNFEANWDDPRQTDAAVAWVRESVAEMRE 410
Query: 163 PDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASV 195
N + + +N +++A +
Sbjct: 411 FPAVRGQYVNFPGLEEESSEVPFGENADRLAEI 443
>gi|290476816|ref|YP_003469727.1| stringent starvation protein B [Xenorhabdus bovienii SS-2004]
gi|289176160|emb|CBJ82965.1| stringent starvation protein B [Xenorhabdus bovienii SS-2004]
Length = 160
Score = 38.7 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 1/99 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F V ++ +P A+ Y + F+ + +
Sbjct: 62 NLELTNDEVRFNARFGGVARQVSVPMAAVIAVYGRENGAGMMFEPESAYQAGSTPEDSDV 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
V + + DSS + + V+
Sbjct: 122 PVADNLVLISDAKIA-RDNDSSDDEPPQPPKGRPTLRVV 159
>gi|226943438|ref|YP_002798511.1| ClpXP protease specificity-enhancing factor [Azotobacter vinelandii
DJ]
gi|226718365|gb|ACO77536.1| Stringent starvation protein B [Azotobacter vinelandii DJ]
Length = 135
Score = 38.7 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 28/103 (27%), Gaps = 7/103 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
V++ Y IV+ + L + + F V L IP A+
Sbjct: 32 PNVQVP----AGYVSDGQIVLNISPSAVRHLHMDNQGVSFEGRFGGVAHSLFIPPEAVMA 87
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQT 171
Y + F+V E + G P +
Sbjct: 88 IYARENGQGMVFEVEPPAAEGGAGPDDDGPSGGEPPRPAGRPS 130
>gi|134294536|ref|YP_001118271.1| ClpXP protease specificity-enhancing factor [Burkholderia
vietnamiensis G4]
gi|134137693|gb|ABO53436.1| Stringent starvation protein B [Burkholderia vietnamiensis G4]
Length = 168
Score = 38.7 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 3/124 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + + IV+ F L++ + E FS ++ IP + Y
Sbjct: 31 VDQSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIEIPVANVLAIY 90
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F V E + G + S D + S + + + N
Sbjct: 91 ARENGQGMAFQVDAVAGEGEDSGVAEDEGTPSDDAASPLTPVAESGANEEPSEGADEPPN 150
Query: 191 KMAS 194
Sbjct: 151 TDGD 154
>gi|330811594|ref|YP_004356056.1| Stringent starvation protein B [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379702|gb|AEA71052.1| Stringent starvation protein B [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 137
Score = 38.4 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
V++ + + IV+ L + ++ F VP L +P AI
Sbjct: 31 FPSVQVP----QGFANDGQIVLNVSPAAVRHLHMDNDAVSFEGRFGGVPHTLYVPIAAIL 86
Query: 128 GFYDPSVNFELEFDVHIEHIEEKL 151
G Y + F++ E+
Sbjct: 87 GIYARENGQGMVFELEAPLDGEEE 110
>gi|229588390|ref|YP_002870509.1| ClpXP protease specificity-enhancing factor [Pseudomonas
fluorescens SBW25]
gi|229360256|emb|CAY47113.1| stringent starvation protein B [Pseudomonas fluorescens SBW25]
Length = 139
Score = 38.4 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 7/111 (6%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFN 124
+ V++ + + IV+ + L + + F VP L +P
Sbjct: 28 NSEFPAVQVP----EGFSSDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVPHTLYVPIG 83
Query: 125 AIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVS 175
AI G Y + FD+ E++ G L PD+ + S
Sbjct: 84 AILGIYARENGQGMVFDLESPFEEDEAIESEAGDDLPPPDSEPPRPSGRPS 134
>gi|304310303|ref|YP_003809901.1| Stringent starvation protein B [gamma proteobacterium HdN1]
gi|301796036|emb|CBL44240.1| Stringent starvation protein B [gamma proteobacterium HdN1]
Length = 163
Score = 38.4 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 28/95 (29%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + ++ E F V L +P +A+ Y + FD + E K
Sbjct: 58 LVMDNDRVEFSARFGGVARTLYLPISAVLAIYAKENGRGMFFDENEMSSEGVEPSAVPAK 117
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ P ++ + S + K
Sbjct: 118 MDDKPHGVLAPVAHTEAPHGSDVPPSDTPTKGGKG 152
>gi|268590727|ref|ZP_06124948.1| stringent starvation protein B [Providencia rettgeri DSM 1131]
gi|291313498|gb|EFE53951.1| stringent starvation protein B [Providencia rettgeri DSM 1131]
Length = 164
Score = 38.4 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 2/101 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+ ++ + F +P ++ +P AI Y + F+ + E G
Sbjct: 63 NFEITNEEVRFNARFGGIPRQVYVPMAAIMAVYARENGAGMMFEPEAAYDAELSAGFEQV 122
Query: 158 KVLTSPDN--FDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+ L + + + S + S + + V+
Sbjct: 123 EELEDNISLVHETESVDENSHEPSGDEPPRPPKGRPSLRVV 163
>gi|71737095|ref|YP_276245.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|257483463|ref|ZP_05637504.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|71557648|gb|AAZ36859.1| stringent starvation protein B [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322465|gb|EFW78558.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. glycinea str. B076]
gi|320330066|gb|EFW86053.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330875032|gb|EGH09181.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330987119|gb|EGH85222.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|331011563|gb|EGH91619.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tabaci ATCC 11528]
Length = 136
Score = 38.4 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 7/108 (6%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
+ V++ + + IV+ + L + + F VP L +P AI
Sbjct: 30 DYPSVQVP----QGFANDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVPHTLYVPVAAI 85
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSV 174
G Y + FD+ E + S + +
Sbjct: 86 LGIYARENGQGMVFDLEPSMDEGEEIEIEDDTPPDSEPPRPSGRPSLK 133
>gi|257455050|ref|ZP_05620294.1| stringent starvation protein B [Enhydrobacter aerosaccus SK60]
gi|257447563|gb|EEV22562.1| stringent starvation protein B [Enhydrobacter aerosaccus SK60]
Length = 144
Score = 38.4 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 12/135 (8%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFW---DL 99
+V+ + + P H I T V + Y + IV+ +L
Sbjct: 14 MVRAIFEWLEDNNLTP---H--IMVDTTQPNVTVP----VEYVQDGRIVLNIASRATGNL 64
Query: 100 KVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKV 159
+ ++ F V + L +P A+ G Y + + FD + E +
Sbjct: 65 VINNDFINFHARFGGVSQELWVPMQAVMGIYARENSQGMFFDPTEYDNAPQSEINASQPA 124
Query: 160 LTSPDNFDKNQTNSV 174
++ K + +
Sbjct: 125 ESTDAQRPKRENKAG 139
>gi|329298212|ref|ZP_08255548.1| ClpXP protease specificity-enhancing factor [Plautia stali
symbiont]
Length = 161
Score = 38.4 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 38/130 (29%), Gaps = 7/130 (5%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
N GV++ Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 35 NLPGVQVP----LEYARDGQIVLNIAPRAVGNLELANDQVRFNARFGGVPRQVSVPMAAV 90
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKK 186
Y F+ + E + + ++ D S
Sbjct: 91 LAIYARENGAGTMFEPEPAYELSGDEQEGSQEETLVSVIDGDRPDDATDDDCSPDDEPPP 150
Query: 187 QNKNKMASVI 196
+ V+
Sbjct: 151 RGGRPSLRVV 160
>gi|146305942|ref|YP_001186407.1| ClpXP protease specificity-enhancing factor [Pseudomonas mendocina
ymp]
gi|145574143|gb|ABP83675.1| Stringent starvation protein B [Pseudomonas mendocina ymp]
Length = 137
Score = 38.0 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 29/106 (27%), Gaps = 7/106 (6%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQNQ---FWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GV++ + IV+ L + + F V L IP A+
Sbjct: 31 FPGVQVPS----GFASDGQIVLNASPSAVRHLHMDNQAVSFEGRFGGVAHSLYIPAAAVL 86
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNS 173
Y + FD+ E G + + + S
Sbjct: 87 AIYARENGQGMVFDMEPPMAGGPEESGPDDDGPSGGEPPRPSGRPS 132
>gi|313672570|ref|YP_004050681.1| hypothetical protein Calni_0606 [Calditerrivibrio nitroreducens DSM
19672]
gi|312939326|gb|ADR18518.1| hypothetical protein Calni_0606 [Calditerrivibrio nitroreducens DSM
19672]
Length = 132
Score = 38.0 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 90 IVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG----FYDPSVNFELEFDVHIE 145
I + + +L D+ + F+ + E L IP AI YDPS F +F +
Sbjct: 53 IFSKTSYKNLSFDDHFIYCDMKFNGIWENLKIPIYAINYILDDLYDPS--FVFKFKISSP 110
Query: 146 HIEEKLEGGNTGKVLTS 162
N+
Sbjct: 111 PKTIPENKTNSTSKKPQ 127
>gi|271498883|ref|YP_003331908.1| stringent starvation protein B [Dickeya dadantii Ech586]
gi|270342438|gb|ACZ75203.1| Stringent starvation protein B [Dickeya dadantii Ech586]
Length = 168
Score = 38.0 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 37/117 (31%), Gaps = 2/117 (1%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV++ ++ + I + +L++ D+ F VP ++ +P ++ Y
Sbjct: 37 PGVQVPMEFARDGQIVLNIAPRA-VGNLELADDSVRFNARFGGVPRQVFVPMASVMAIYA 95
Query: 132 PSVNFELEFDVHIE-HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ 187
F+ I E+ + + P S + + +
Sbjct: 96 RENGAGTMFEPEPAYEIVEEFGVQPHSEEESRPTLMSVVDNEPSSPAAESEPQPDDE 152
>gi|149910613|ref|ZP_01899251.1| Stringent starvation protein B [Moritella sp. PE36]
gi|149806341|gb|EDM66316.1| Stringent starvation protein B [Moritella sp. PE36]
Length = 163
Score = 38.0 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%)
Query: 111 SFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQ 170
F VP + +P AI Y F+ +I++ + V S +
Sbjct: 73 RFGGVPFDVYVPIAAITAIYARENGAGSMFEPEQAYIDQAEQDSAEVAVEPSEEKSKPAL 132
Query: 171 TNSVSQDSSKKKSTKKQNKNKMAS 194
++ + S + ++ K
Sbjct: 133 VSAPAVSSESQSDAPERPKPAKGK 156
>gi|332286356|ref|YP_004418267.1| hypothetical protein PT7_3103 [Pusillimonas sp. T7-7]
gi|330430309|gb|AEC21643.1| hypothetical protein PT7_3103 [Pusillimonas sp. T7-7]
Length = 160
Score = 38.0 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 29/93 (31%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + + E FS V E + +P A+ Y + FDV E
Sbjct: 59 LTLGNEYIEFQTRFSGVTEHIFVPVGAVSAIYARETGAGMGFDVVESQPYPGGESSPASG 118
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
+ P + + N S+ + K
Sbjct: 119 ADSGPGSSEINLEAVSDNGSAVAAEGSTSSAPK 151
>gi|119477348|ref|ZP_01617539.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2143]
gi|119449274|gb|EAW30513.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2143]
Length = 141
Score = 38.0 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL V D + F VP + +P +A+ G Y + FD+ ++ G+
Sbjct: 57 DLLVADEDVQFNGRFGGVPMDIYVPMSAVMGIYARENGQGMIFDLDEGDVKPPTPEGSDP 116
Query: 158 KVLTSPDNFDKNQTNSVSQ 176
QT + S
Sbjct: 117 TTNGPKLVKKSPQTKTKSP 135
>gi|239504123|ref|ZP_04663433.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AB900]
Length = 142
Score = 38.0 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLHISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E + + + K T
Sbjct: 117 VEDKLDSETQETSEPTKKKPT 137
>gi|312958963|ref|ZP_07773482.1| stringent starvation protein B [Pseudomonas fluorescens WH6]
gi|311286733|gb|EFQ65295.1| stringent starvation protein B [Pseudomonas fluorescens WH6]
Length = 139
Score = 38.0 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 27/79 (34%)
Query: 97 WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNT 156
L + + F VP L +P AI G Y + FD+ +++
Sbjct: 56 RHLHMDNEAVSFEGRFGGVPHTLYVPIGAILGIYARENGQGMVFDLESPFEDDETIESED 115
Query: 157 GKVLTSPDNFDKNQTNSVS 175
G L PD+ + S
Sbjct: 116 GDDLPPPDSEPPRPSGRPS 134
>gi|206890269|ref|YP_002248035.1| hypothetical protein THEYE_A0185 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206742207|gb|ACI21264.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 150
Score = 38.0 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 102 LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVL 160
++ L F N PE+ IP NAI G + P + +L V I+++ + +
Sbjct: 69 DEDAITATLVFGNTPEKCYIPINAIAGVFSPDLRVQLAVPVFKSKIKDEGDSSTATQND 127
>gi|332140239|ref|YP_004425977.1| stringent starvation protein B [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550261|gb|AEA96979.1| stringent starvation protein B [Alteromonas macleodii str. 'Deep
ecotype']
Length = 157
Score = 37.6 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 34/129 (26%), Gaps = 7/129 (5%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLV 120
YI V + Q K IV+ + + + FS P RL
Sbjct: 27 YIVVDATNELVEVPQEFVK----DGQIVLNVSPSACVNFSLDLDGLSFQARFSGQPRRLS 82
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
+P A+ Y F + + E + L+ P + S
Sbjct: 83 MPCEAVMAIYARENGAGTVFATEEDVARAQQERSEEPEDLSQPSGPTSLEDADASDVQDA 142
Query: 181 KKSTKKQNK 189
KK
Sbjct: 143 PVPPKKGKP 151
>gi|160872713|ref|ZP_02062845.1| stringent starvation protein B [Rickettsiella grylli]
gi|159121512|gb|EDP46850.1| stringent starvation protein B [Rickettsiella grylli]
Length = 129
Score = 37.6 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 3/102 (2%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQNQ-FWDLKVLDNHFEVGLSFSNVPERLVIP 122
YI V + ++ K K+T+ I N +LK+ + SF+ + P
Sbjct: 25 YIVLDAELPHVEVPKHCIKE--GKITLNISNDAVLNLKIDTQAIQFEASFNGQSMLIYAP 82
Query: 123 FNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPD 164
A+ Y + F H E+ + T P
Sbjct: 83 IQAVLAIYTRENGQGMAFTEKENHDEDGNNPPPRVRPGTKPK 124
>gi|115372785|ref|ZP_01460091.1| stringent starvation protein B [Stigmatella aurantiaca DW4/3-1]
gi|115370266|gb|EAU69195.1| stringent starvation protein B [Stigmatella aurantiaca DW4/3-1]
Length = 157
Score = 37.6 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
GV + +LR ++ I + DL V + LSFS + +P++A+
Sbjct: 5 DARRPGVLVPPHLRNEAHLRLNISYRFDPPDLAVGEWGVRSTLSFSGSRFTVAVPWSAL 63
>gi|262369193|ref|ZP_06062521.1| stringent starvation protein B family protein [Acinetobacter
johnsonii SH046]
gi|262315261|gb|EEY96300.1| stringent starvation protein B family protein [Acinetobacter
johnsonii SH046]
Length = 143
Score = 37.6 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 30/105 (28%), Gaps = 1/105 (0%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
+ + ++ + IV + L + ++ F V + +P NA+
Sbjct: 35 DATQPNTLVPEQFIQDGQIVLNIV-PHAVHALHMSNDAITFSARFGGVSRDIYVPLNAVI 93
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTN 172
G Y L FD + E K + +
Sbjct: 94 GIYARENGQGLFFDPSEYDNHTQSEQNALKSDNEEKTEPAKKKPS 138
>gi|157373944|ref|YP_001472544.1| ClpXP protease specificity-enhancing factor [Shewanella sediminis
HAW-EB3]
gi|157316318|gb|ABV35416.1| stringent starvation protein B [Shewanella sediminis HAW-EB3]
Length = 152
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 7/113 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ + Y + IV+ + +L++ + E F VP+++V+P AI
Sbjct: 35 PGTQVP----QQYVKDGQIVLNITASAVGNLQIGHDFIEFSARFGGVPQQVVLPMAAIVA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
Y FD+ + E V+ + T Q K
Sbjct: 91 IYARENGAGTVFDMEEAYQLEDESVEAGLTVVEEATEEEPVLTEEAPQAPEPK 143
>gi|156935744|ref|YP_001439660.1| ClpXP protease specificity-enhancing factor [Cronobacter sakazakii
ATCC BAA-894]
gi|156533998|gb|ABU78824.1| hypothetical protein ESA_03614 [Cronobacter sakazakii ATCC BAA-894]
Length = 163
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 9/130 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV + Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 37 PGVLVP----LEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGVPRQVTVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLE--GGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKK 186
Y F+ + EE N+ + + + + D+
Sbjct: 93 IYARENGAGTMFEPEAAYDEEMASLNDENSAEEPETVMSVIDGDKPDDADDNDPGDEPPP 152
Query: 187 QNKNKMASVI 196
+ V+
Sbjct: 153 RGGRPALRVV 162
>gi|310823430|ref|YP_003955788.1| stringent starvation family protein b [Stigmatella aurantiaca
DW4/3-1]
gi|309396502|gb|ADO73961.1| Stringent starvation family protein B [Stigmatella aurantiaca
DW4/3-1]
Length = 178
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
GV + +LR ++ I + DL V + LSFS + +P++A+
Sbjct: 26 DARRPGVLVPPHLRNEAHLRLNISYRFDPPDLAVGEWGVRSTLSFSGSRFTVAVPWSAL 84
>gi|300724948|ref|YP_003714273.1| stringent starvation protein B [Xenorhabdus nematophila ATCC 19061]
gi|297631490|emb|CBJ92197.1| stringent starvation protein B [Xenorhabdus nematophila ATCC 19061]
Length = 156
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 1/94 (1%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F + + +P +A+ Y + F+ E E
Sbjct: 57 NLELTNDDVRFNARFGGIAREVSVPMDAVVAIYARENGAGMMFE-PESAYEANDEAEEKH 115
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
V + + +++ D S + K +
Sbjct: 116 SVSPADNLVQLHRSKISRDDGSPDDEPPQPPKGR 149
>gi|146313297|ref|YP_001178371.1| ClpXP protease specificity-enhancing factor [Enterobacter sp. 638]
gi|145320173|gb|ABP62320.1| Stringent starvation protein B [Enterobacter sp. 638]
Length = 165
Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 7/89 (7%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV++ Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 37 PGVQVP----MEYARDGQIVLNIAPRAVGNLELSNDEVSFNARFGGVPRQVSVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
Y F+ + E+ +
Sbjct: 93 VYARENGAGTMFEPEAAYDEDVASLNDED 121
>gi|83648536|ref|YP_436971.1| ClpXP protease specificity-enhancing factor [Hahella chejuensis
KCTC 2396]
gi|83636579|gb|ABC32546.1| Stringent starvation protein B [Hahella chejuensis KCTC 2396]
Length = 140
Score = 37.2 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 48/140 (34%), Gaps = 21/140 (15%)
Query: 60 EHHF--YITFATNARGVRISQNLRKNYPEKMTIVIQNQ-FWDLKVLDNHFEVGLSFSNVP 116
++H Y+ + +GV + ++ N ++ + I Q L + +++ E F VP
Sbjct: 18 DNHLTPYVVVDASLQGVDVPRDFVSN--GQIVLNISPQAVRGLSIGNDYLEFSARFGGVP 75
Query: 117 ERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ 176
++ +P A+ Y +E +G G +++ S
Sbjct: 76 RQVSVPVMAVLAIY----------------AKENGQGMVFGSEPGGAPEPPGSKSKPGSS 119
Query: 177 DSSKKKSTKKQNKNKMASVI 196
+ K + ++
Sbjct: 120 PAPPPKGGGRDGSKPSLKIV 139
>gi|114564464|ref|YP_751978.1| ClpXP protease specificity-enhancing factor [Shewanella
frigidimarina NCIMB 400]
gi|114335757|gb|ABI73139.1| Stringent starvation protein B [Shewanella frigidimarina NCIMB 400]
Length = 156
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 3/99 (3%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L + ++ E F VP+ + +P +I Y FD+ ++ E +
Sbjct: 60 NLHMSNDAVEFNARFGGVPQNVFLPMASIVAIYARENGAGTVFDMEDAYMIEGEHDELSS 119
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
P + T+++ S K K + +V+
Sbjct: 120 ---VPPSMKSVDDTSTLPPSSKSTKPDDKTKRKNHLTVV 155
>gi|330984415|gb|EGH82518.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. lachrymans str. M301315]
Length = 126
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 66 TFATNARGVRISQNLRKNYPEKMTIVIQNQF---WDLKVLDNHFEVGLSFSNVPERLVIP 122
+F+T GV++ + + ++T+ + N V + + SFS + + IP
Sbjct: 30 SFSTEYPGVKVPK-VNSTREGQLTLDMSNSMVTGLAFNVETSVISLMASFSGTFQSIRIP 88
Query: 123 FNAIKGFYDPSVNFELEFDVHIEHIEE 149
A+ Y F V + E
Sbjct: 89 AQAVLLLYAKESKRGEGFLVELPSPTE 115
>gi|253995703|ref|YP_003047767.1| Stringent starvation protein B [Methylotenera mobilis JLW8]
gi|253982382|gb|ACT47240.1| Stringent starvation protein B [Methylotenera mobilis JLW8]
Length = 142
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 31/78 (39%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL + ++ F V + + +P +A++G + + F+ +E E + +
Sbjct: 59 DLHIDNDSVVFSARFGGVSQNIYVPMSAVRGVFARENGQGMFFEADLEQEEVQFSADHAE 118
Query: 158 KVLTSPDNFDKNQTNSVS 175
+ +N ++ +
Sbjct: 119 EDAKPAENKEELNKSKKP 136
>gi|241763820|ref|ZP_04761866.1| Stringent starvation protein B [Acidovorax delafieldii 2AN]
gi|241366952|gb|EER61357.1| Stringent starvation protein B [Acidovorax delafieldii 2AN]
Length = 173
Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 15/121 (12%), Positives = 40/121 (33%), Gaps = 3/121 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + + Y + IV+ F L++ ++ E F P +++P + Y
Sbjct: 34 VDGSVQVPREYVKDGEIVLNISFDATSSLQLGNDFIEFKARFGGKPRDILVPVGRVIAIY 93
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ F ++ ++ ++ ++ + Q + +S +
Sbjct: 94 ARENGQGMAFPPPVDMVDAAVDMAPVPSAPSAVQSATAEQADERVVQLVPAESAPAEGDA 153
Query: 191 K 191
Sbjct: 154 D 154
>gi|289665643|ref|ZP_06487224.1| ClpXP protease specificity-enhancing factor [Xanthomonas campestris
pv. vasculorum NCPPB702]
Length = 139
Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 38/134 (28%), Gaps = 10/134 (7%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
L++ ++ + G P H + GV++ + + + + L+V
Sbjct: 8 LLRALVEWINDNGMTP---HVLV--DAGLPGVQVPAS-AVKDGRVVLNIAERAVVGLQVD 61
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTS 162
+ F V +++P A+ Y + +
Sbjct: 62 NESVSFTARFGGVSHPVMVPMAAVLAVYARETGQGMAL----PDDIPGTSSEPPDPGASP 117
Query: 163 PDNFDKNQTNSVSQ 176
P ++ S +
Sbjct: 118 PSAPTPDEPPSGGK 131
>gi|193078418|gb|ABO13404.2| stringent starvation protein B [Acinetobacter baumannii ATCC 17978]
Length = 142
Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
LE + + + K T
Sbjct: 117 LEDKLDSETQETSEPTKKKPT 137
>gi|262377465|ref|ZP_06070687.1| stringent starvation protein B [Acinetobacter lwoffii SH145]
gi|262307521|gb|EEY88662.1| stringent starvation protein B [Acinetobacter lwoffii SH145]
Length = 142
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 1/108 (0%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPF 123
Y+ + + K+ + IV + L + ++ F V + +P
Sbjct: 31 YLLVDATRPNTMVPEQFIKDGQIVLNIV-PHAVHALHMSNDAISFSARFGGVSRDIYVPM 89
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQT 171
A+ G Y L FD + E + K T
Sbjct: 90 AAVLGIYARENGQGLFFDPGEYEHTQNDEDALKSSTEEQTEQPKKKPT 137
>gi|213966582|ref|ZP_03394733.1| stringent starvation protein B [Pseudomonas syringae pv. tomato T1]
gi|301384703|ref|ZP_07233121.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tomato Max13]
gi|302059810|ref|ZP_07251351.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tomato K40]
gi|302131756|ref|ZP_07257746.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|213928432|gb|EEB61976.1| stringent starvation protein B [Pseudomonas syringae pv. tomato T1]
Length = 137
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 7/90 (7%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
V++ + + IV+ + L + ++ F VP L +P AI
Sbjct: 31 YPSVQVP----QGFANDGQIVLNVSPSAVRHLHMDNDAVSFEGRFGGVPHTLYVPVAAIL 86
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
G Y + FD+ +
Sbjct: 87 GIYARENGQGMVFDLEPSLEAGEEIETEDD 116
>gi|24372203|ref|NP_716245.1| ClpXP protease specificity-enhancing factor [Shewanella oneidensis
MR-1]
gi|24346115|gb|AAN53690.1|AE015508_6 stringent starvation protein b [Shewanella oneidensis MR-1]
Length = 145
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 28/77 (36%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FD+ ++ E
Sbjct: 60 NLQISNEFVEFNARFGGVPQQVLLPMASIVAIYARENGAGTVFDIEDAYLVEDEAESTLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
+ T+ +
Sbjct: 120 VIETAEKPTEPKDEPPK 136
>gi|90416997|ref|ZP_01224926.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2207]
gi|90331344|gb|EAS46588.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2207]
Length = 147
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 15/125 (12%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ-------NQFWDLKVLDNHFEVGLSFSNVP 116
YI + GV + ++Y IV+ N DL++L F F +P
Sbjct: 26 YIVVDAHHPGVEVP----QSYVTDGQIVLNVAPRAVSNFILDLEIL--AFSTR--FGGMP 77
Query: 117 ERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQ 176
+ +P A+ G Y + F+ V S + ++ +
Sbjct: 78 IDIQVPVTAVVGIYSQENGQGMVFEHEASDDLPPTPPSGPKAVKKSSTKPSASLSDKAPK 137
Query: 177 DSSKK 181
Sbjct: 138 KIKPS 142
>gi|308189061|ref|YP_003933192.1| Stringent starvation protein B [Pantoea vagans C9-1]
gi|308059571|gb|ADO11743.1| Stringent starvation protein B [Pantoea vagans C9-1]
Length = 161
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 36/130 (27%), Gaps = 7/130 (5%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
N GV++ Y IV+ +L + ++ F VP ++ +P AI
Sbjct: 35 NLPGVQVP----LEYARDGQIVLNIAPRAVGNLDLANDQVSFNARFGGVPRQVNVPMAAI 90
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKK 186
Y F+ + E + ++ ++
Sbjct: 91 LAIYARENGAGTMFEPEPAYELGMQEASEGQEETMMSVIDGDRPDDASDDETPPDDDPPP 150
Query: 187 QNKNKMASVI 196
+ V+
Sbjct: 151 RGGRPSLRVV 160
>gi|239995462|ref|ZP_04715986.1| stringent starvation protein B [Alteromonas macleodii ATCC 27126]
Length = 157
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 35/129 (27%), Gaps = 7/129 (5%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLV 120
YI V + Q K IV+ + + + FS P RL
Sbjct: 27 YIVVDATNELVEVPQEFVK----DGQIVLNVSPSACVNFSLDLDGLSFQARFSGQPRRLS 82
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
+P A+ Y F + + E T + ++ P + S
Sbjct: 83 MPCEAVMAIYARENGAGTVFATEEDVARAQQERPETSEDVSQPSGPTSLEDADASDVKDA 142
Query: 181 KKSTKKQNK 189
KK
Sbjct: 143 PVPPKKGKP 151
>gi|169794668|ref|YP_001712461.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AYE]
gi|184159522|ref|YP_001847861.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii ACICU]
gi|213157960|ref|YP_002320758.1| stringent starvation protein B [Acinetobacter baumannii AB0057]
gi|215482258|ref|YP_002324440.1| Stringent starvation protein B family protein [Acinetobacter
baumannii AB307-0294]
gi|260558125|ref|ZP_05830335.1| stringent starvation protein B [Acinetobacter baumannii ATCC 19606]
gi|301345855|ref|ZP_07226596.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AB056]
gi|301512171|ref|ZP_07237408.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AB058]
gi|301595551|ref|ZP_07240559.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii AB059]
gi|332851551|ref|ZP_08433528.1| stringent starvation protein B [Acinetobacter baumannii 6013150]
gi|332867750|ref|ZP_08437822.1| stringent starvation protein B [Acinetobacter baumannii 6013113]
gi|332873485|ref|ZP_08441436.1| stringent starvation protein B [Acinetobacter baumannii 6014059]
gi|169147595|emb|CAM85456.1| stringent starvation protein B [Acinetobacter baumannii AYE]
gi|183211116|gb|ACC58514.1| Stringent starvation protein B [Acinetobacter baumannii ACICU]
gi|213057120|gb|ACJ42022.1| stringent starvation protein B [Acinetobacter baumannii AB0057]
gi|213986397|gb|ACJ56696.1| Stringent starvation protein B family protein [Acinetobacter
baumannii AB307-0294]
gi|260408398|gb|EEX01706.1| stringent starvation protein B [Acinetobacter baumannii ATCC 19606]
gi|322509434|gb|ADX04888.1| sspB [Acinetobacter baumannii 1656-2]
gi|323519455|gb|ADX93836.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii TCDC-AB0715]
gi|332729896|gb|EGJ61228.1| stringent starvation protein B [Acinetobacter baumannii 6013150]
gi|332733756|gb|EGJ64908.1| stringent starvation protein B [Acinetobacter baumannii 6013113]
gi|332738310|gb|EGJ69186.1| stringent starvation protein B [Acinetobacter baumannii 6014059]
Length = 142
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E + + + K T
Sbjct: 117 VEDKLDSETQETSEPTKKKPT 137
>gi|310766210|gb|ADP11160.1| Stringent starvation protein B [Erwinia sp. Ejp617]
Length = 165
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 9/95 (9%), Positives = 25/95 (26%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L++ ++ F VP ++ +P A+ Y F+ + + G+
Sbjct: 63 LELGNDEVRFSARFGGVPRQVSVPLAAVLAIYARENGAGTMFEPEPVYDGSGEFQASNGE 122
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + +
Sbjct: 123 DEAPETVMSVIDGDRPDDSVADDDGPDGEPPPRGG 157
>gi|261856116|ref|YP_003263399.1| stringent starvation protein B [Halothiobacillus neapolitanus c2]
gi|261836585|gb|ACX96352.1| Stringent starvation protein B [Halothiobacillus neapolitanus c2]
Length = 175
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 22/75 (29%)
Query: 111 SFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQ 170
F E + +P A+ G YD +F + + S + K Q
Sbjct: 70 RFGGKAESIFVPMRAVVGIYDRDSGSGAQFPPEPDEEFMDDDDAQDSAPKLSLADTGKVQ 129
Query: 171 TNSVSQDSSKKKSTK 185
T D+ +
Sbjct: 130 TLRRVSDNRSSDADS 144
>gi|160900931|ref|YP_001566513.1| stringent starvation protein B [Delftia acidovorans SPH-1]
gi|160366515|gb|ABX38128.1| Stringent starvation protein B [Delftia acidovorans SPH-1]
Length = 176
Score = 36.8 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 9/108 (8%), Positives = 25/108 (23%), Gaps = 3/108 (2%)
Query: 90 IVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEH 146
IV+ + L++ ++ F P +++P + Y + F
Sbjct: 50 IVLNVSYDATSGLQMGNDFISFTARFGGKPREIMVPVEQVMAIYARETGQGMAFPAPESD 109
Query: 147 IEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMAS 194
+ E + + + +
Sbjct: 110 ADADNEVSMEQESDEPVSQDAVAEVPAEPAADERVVQLVSIQNEGDDE 157
>gi|90413024|ref|ZP_01221022.1| putative stringent starvation protein B [Photobacterium profundum
3TCK]
gi|90326039|gb|EAS42478.1| putative stringent starvation protein B [Photobacterium profundum
3TCK]
Length = 168
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 13/109 (11%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIK----------GFYDPSVNFELEFDVHIEHI 147
+L++ + FS P +++P A+ +DP + + D E+
Sbjct: 62 NLELGNEAVSFNARFSGRPHAVIVPMYAVVAIYARENGAGTMFDPEPAYATDLDAFDENE 121
Query: 148 EEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
E +++G + + T +S D+ + V+
Sbjct: 122 EAEIDGIVE---VQAETLAPVAVTAEISDDNEPDDEPPRPRGRPSLRVV 167
>gi|187479803|ref|YP_787828.1| ClpXP protease specificity-enhancing factor [Bordetella avium 197N]
gi|115424390|emb|CAJ50943.1| stringent starvation protein B [Bordetella avium 197N]
Length = 145
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 28/81 (34%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E +++P A+ Y + F+V + E G+
Sbjct: 59 LLLGNEFIEFQARFSGVTENVMVPVQAVSAIYARETGAGMGFEVQPYEPAVREEAAQEGE 118
Query: 159 VLTSPDNFDKNQTNSVSQDSS 179
+S D + +
Sbjct: 119 SQSSADTPAPAEDSPADTKRP 139
>gi|50119269|ref|YP_048436.1| ClpXP protease specificity-enhancing factor [Pectobacterium
atrosepticum SCRI1043]
gi|49609795|emb|CAG73229.1| stringent starvation protein B [Pectobacterium atrosepticum
SCRI1043]
Length = 167
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHI--EHIEEKLEGGNT 156
L++ D+ F VP ++ +P A+ Y F+ E E
Sbjct: 63 LELADDSVRFNARFGGVPRQVHVPMAAVMAIYARENGAGTMFESEPAYESAGEYEGFQEG 122
Query: 157 GKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + +S + D + K
Sbjct: 123 APSSGTVMSIVDSSPDSEAPDDGSGSDDEPPPPPKGG 159
>gi|113968950|ref|YP_732743.1| ClpXP protease specificity-enhancing factor [Shewanella sp. MR-4]
gi|114048912|ref|YP_739462.1| ClpXP protease specificity-enhancing factor [Shewanella sp. MR-7]
gi|113883634|gb|ABI37686.1| Stringent starvation protein B [Shewanella sp. MR-4]
gi|113890354|gb|ABI44405.1| Stringent starvation protein B [Shewanella sp. MR-7]
Length = 145
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 29/77 (37%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FD+ ++ E+
Sbjct: 60 NLQIGNEFVEFNARFGGVPQQVLLPMASIVAIYARENGAGTVFDIEDAYLVEEEAESTLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
+ T+ +
Sbjct: 120 VIETNEKPTEPTDEPPK 136
>gi|317403218|gb|EFV83738.1| stringent starvation protein B [Achromobacter xylosoxidans C54]
Length = 147
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 10/98 (10%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + + E FS V E + +P A+ Y + F+V
Sbjct: 59 LVLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGMGFEVQPYEP----------P 108
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVI 196
+P D + + + + K +++
Sbjct: 109 APGTPGASDTASPEADADTAPGDDGGDDEPKRPRLTIV 146
>gi|304396309|ref|ZP_07378190.1| Stringent starvation protein B [Pantoea sp. aB]
gi|304355818|gb|EFM20184.1| Stringent starvation protein B [Pantoea sp. aB]
Length = 161
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 36/130 (27%), Gaps = 7/130 (5%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
N GV++ Y IV+ +L + ++ F VP ++ +P AI
Sbjct: 35 NLPGVQVP----LEYARDGQIVLNIAPRAVGNLDLANDQVSFNARFGGVPRQVNVPMAAI 90
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKK 186
Y F+ + E + ++ ++
Sbjct: 91 LAIYARENGAGTMFEPEPAYELGTQETSEGQEETMMSVIDGDRPDDARDDETPPDDDPPP 150
Query: 187 QNKNKMASVI 196
+ V+
Sbjct: 151 RGGRPSLRVV 160
>gi|218550504|ref|YP_002384295.1| ClpXP protease specificity-enhancing factor [Escherichia fergusonii
ATCC 35469]
gi|218358045|emb|CAQ90691.1| ClpXP protease specificity-enhancing factor [Escherichia fergusonii
ATCC 35469]
gi|324115174|gb|EGC09138.1| stringent starvation protein B [Escherichia fergusonii B253]
gi|325498802|gb|EGC96661.1| ClpXP protease specificity-enhancing factor [Escherichia fergusonii
ECD227]
Length = 167
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 7/98 (7%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV++ Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 37 PGVKVP----MEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGVPRQVYVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNF 166
Y F+ + EE +
Sbjct: 93 IYARENGAGTMFEPEAAYDEEIASQNDDETTSADESET 130
>gi|188532463|ref|YP_001906260.1| Stringent starvation protein B [Erwinia tasmaniensis Et1/99]
gi|188027505|emb|CAO95352.1| Stringent starvation protein B [Erwinia tasmaniensis Et1/99]
Length = 165
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 27/96 (28%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL++ ++ F VP ++ +P A+ Y F+ E+ + G
Sbjct: 62 DLELGNDEVRFSARFGGVPRQVSVPLAAVLAIYARENGAGTMFEPEPEYDGVDESEASNG 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + + + +
Sbjct: 122 EDQAPETVMSVIDGDRPDDSVTGDDGPDDEPPPRGG 157
>gi|26249807|ref|NP_755847.1| ClpXP protease specificity-enhancing factor [Escherichia coli
CFT073]
gi|91212646|ref|YP_542632.1| ClpXP protease specificity-enhancing factor [Escherichia coli
UTI89]
gi|110643461|ref|YP_671191.1| ClpXP protease specificity-enhancing factor [Escherichia coli 536]
gi|117625512|ref|YP_858835.1| ClpXP protease specificity-enhancing factor [Escherichia coli APEC
O1]
gi|191174410|ref|ZP_03035913.1| stringent starvation protein B [Escherichia coli F11]
gi|218560290|ref|YP_002393203.1| ClpXP protease specificity-enhancing factor [Escherichia coli S88]
gi|218691510|ref|YP_002399722.1| ClpXP protease specificity-enhancing factor [Escherichia coli ED1a]
gi|227887942|ref|ZP_04005747.1| stringent starvation protein B [Escherichia coli 83972]
gi|237706027|ref|ZP_04536508.1| stringent starvation protein B [Escherichia sp. 3_2_53FAA]
gi|300979840|ref|ZP_07174735.1| stringent starvation protein B [Escherichia coli MS 200-1]
gi|300990952|ref|ZP_07179404.1| stringent starvation protein B [Escherichia coli MS 45-1]
gi|301047930|ref|ZP_07194976.1| stringent starvation protein B [Escherichia coli MS 185-1]
gi|306816437|ref|ZP_07450569.1| ClpXP protease specificity-enhancing factor [Escherichia coli
NC101]
gi|331649020|ref|ZP_08350108.1| stringent starvation protein B [Escherichia coli M605]
gi|331659508|ref|ZP_08360450.1| stringent starvation protein B [Escherichia coli TA206]
gi|26110235|gb|AAN82421.1|AE016767_181 Stringent starvation protein B [Escherichia coli CFT073]
gi|91074220|gb|ABE09101.1| stringent starvation protein B [Escherichia coli UTI89]
gi|110345053|gb|ABG71290.1| stringent starvation protein B [Escherichia coli 536]
gi|115514636|gb|ABJ02711.1| stringent starvation protein B [Escherichia coli APEC O1]
gi|190905300|gb|EDV64936.1| stringent starvation protein B [Escherichia coli F11]
gi|218367059|emb|CAR04830.1| ClpXP protease specificity-enhancing factor [Escherichia coli S88]
gi|218429074|emb|CAR10018.2| ClpXP protease specificity-enhancing factor [Escherichia coli ED1a]
gi|222034938|emb|CAP77681.1| Stringent starvation protein B [Escherichia coli LF82]
gi|226899067|gb|EEH85326.1| stringent starvation protein B [Escherichia sp. 3_2_53FAA]
gi|227835338|gb|EEJ45804.1| stringent starvation protein B [Escherichia coli 83972]
gi|281180262|dbj|BAI56592.1| stringent starvation protein B [Escherichia coli SE15]
gi|294489488|gb|ADE88244.1| stringent starvation protein B [Escherichia coli IHE3034]
gi|300300211|gb|EFJ56596.1| stringent starvation protein B [Escherichia coli MS 185-1]
gi|300307907|gb|EFJ62427.1| stringent starvation protein B [Escherichia coli MS 200-1]
gi|300407028|gb|EFJ90566.1| stringent starvation protein B [Escherichia coli MS 45-1]
gi|305850002|gb|EFM50461.1| ClpXP protease specificity-enhancing factor [Escherichia coli
NC101]
gi|307555313|gb|ADN48088.1| stringent starvation protein B [Escherichia coli ABU 83972]
gi|307625179|gb|ADN69483.1| ClpXP protease specificity-enhancing factor [Escherichia coli
UM146]
gi|312947778|gb|ADR28605.1| ClpXP protease specificity-enhancing factor [Escherichia coli
O83:H1 str. NRG 857C]
gi|315288979|gb|EFU48377.1| stringent starvation protein B [Escherichia coli MS 110-3]
gi|315294832|gb|EFU54171.1| stringent starvation protein B [Escherichia coli MS 153-1]
gi|315297912|gb|EFU57182.1| stringent starvation protein B [Escherichia coli MS 16-3]
gi|320194705|gb|EFW69335.1| ClpXP protease specificity-enhancing factor / Stringent starvation
protein B [Escherichia coli WV_060327]
gi|323951260|gb|EGB47135.1| stringent starvation protein B [Escherichia coli H252]
gi|323957632|gb|EGB53346.1| stringent starvation protein B [Escherichia coli H263]
gi|324008734|gb|EGB77953.1| stringent starvation protein B [Escherichia coli MS 57-2]
gi|324015885|gb|EGB85104.1| stringent starvation protein B [Escherichia coli MS 60-1]
gi|330909272|gb|EGH37786.1| clpXP protease specificity-enhancing factor / Stringent starvation
protein B [Escherichia coli AA86]
gi|331042767|gb|EGI14909.1| stringent starvation protein B [Escherichia coli M605]
gi|331054090|gb|EGI26119.1| stringent starvation protein B [Escherichia coli TA206]
Length = 165
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 34/117 (29%), Gaps = 7/117 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV++ Y IV+ +L++ ++ F +P ++ +P A+
Sbjct: 37 PGVQVP----MEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
Y F+ + E+ + + + D +
Sbjct: 93 IYARENGAGTMFEPEAAYDEDASIMNDEEASADNETVMSVIDGDKPDHDDETHPDDE 149
>gi|297537516|ref|YP_003673285.1| Stringent starvation protein B [Methylotenera sp. 301]
gi|297256863|gb|ADI28708.1| Stringent starvation protein B [Methylotenera sp. 301]
Length = 140
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 27/77 (35%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL + + F V + L +P +A+KG + + F++ + + + G
Sbjct: 59 DLLIDNEAISFSARFGGVSQNLYVPMHAVKGIFARENGQGMFFEIEDASLYAGKDEASDG 118
Query: 158 KVLTSPDNFDKNQTNSV 174
+ S D
Sbjct: 119 QAEPSEDKNAIKSKKPT 135
>gi|261365329|ref|ZP_05978212.1| stringent starvation protein B [Neisseria mucosa ATCC 25996]
gi|288566263|gb|EFC87823.1| stringent starvation protein B [Neisseria mucosa ATCC 25996]
Length = 138
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 22/74 (29%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L + ++ F V + IP + + + F+V +
Sbjct: 57 NLNIDNDWISFSARFGGVAHDIWIPVGHVISIFSRESGEGMGFEVEPYESDASGNEAQQE 116
Query: 158 KVLTSPDNFDKNQT 171
P + + ++
Sbjct: 117 PAADKPTDGESAKS 130
>gi|311277813|ref|YP_003940044.1| Stringent starvation protein B [Enterobacter cloacae SCF1]
gi|308747008|gb|ADO46760.1| Stringent starvation protein B [Enterobacter cloacae SCF1]
Length = 161
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 7/97 (7%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV + Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 37 PGVHVP----MEYARDGQIVLNIAPRAVGNLELSNDEVRFNARFGGVPRQVSVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDN 165
Y F+ + EE + D
Sbjct: 93 VYARENGAGTMFEPEAAYDEEVESLNDDAGASAESDT 129
>gi|169634297|ref|YP_001708033.1| ClpXP protease specificity-enhancing factor [Acinetobacter
baumannii SDF]
gi|169153089|emb|CAP02159.1| stringent starvation protein B [Acinetobacter baumannii]
Length = 142
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E + + + K T
Sbjct: 117 VEDKLDSEKQETSEPTKKKPT 137
>gi|117919058|ref|YP_868250.1| ClpXP protease specificity-enhancing factor [Shewanella sp. ANA-3]
gi|117611390|gb|ABK46844.1| Stringent starvation protein B [Shewanella sp. ANA-3]
Length = 145
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 29/77 (37%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FD+ ++ E+
Sbjct: 60 NLQIGNEFVEFNARFGGVPQQVLLPMASIVAIYARENGAGTVFDIEDAYLVEEEAESTLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
+ T+ +
Sbjct: 120 VIETNEKPTEPTDEPPK 136
>gi|331271089|ref|YP_004385798.1| hypothetical protein CbC4_6001 [Clostridium botulinum BKT015925]
gi|329127584|gb|AEB77526.1| hypothetical protein CbC4_6001 [Clostridium botulinum BKT015925]
Length = 558
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 16/115 (13%)
Query: 6 NFFSSRWQWFFIIKWIDTLMNYDHIRYDILAKEALRGLVKVVLSEVASIGSLPG------ 59
N +S+ +I + D L N I Y L+ +K L + +
Sbjct: 253 NKYSTNGMLIYIKRNFDVLANKIPIEY--RFNSDLKRRLKKPLQNLIKHDIISDYFYGDE 310
Query: 60 ------EHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEV 108
EH Y F + +NLR+ Y +++ I + N+F D D +
Sbjct: 311 DIINQKEHCIYFIFKGKKEELI--KNLRQKYQKQLQIAMDNEFEDTSTTDFTMSI 363
>gi|320539426|ref|ZP_08039095.1| putative ClpXP protease specificity-enhancing factor [Serratia
symbiotica str. Tucson]
gi|320030551|gb|EFW12561.1| putative ClpXP protease specificity-enhancing factor [Serratia
symbiotica str. Tucson]
Length = 155
Score = 36.4 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 4/113 (3%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV++ + + + + +L++ D+ F VP ++ +P A++ Y
Sbjct: 32 PGVQVPMEF-ARDGQIVLNIAPHAVGNLELGDDEVRFNARFGGVPRQVSVPMAAVQAIYA 90
Query: 132 PSVNFELEFDVHIEHIEE---KLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
F+ + E + T V + D N+ + D
Sbjct: 91 RENGAGSLFEPEAAYAVEGTIESLDNKTNPVESLISVVDSNRPETSDGDEPPP 143
>gi|254479928|ref|ZP_05093176.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2148]
gi|214039490|gb|EEB80149.1| stringent starvation protein B [marine gamma proteobacterium
HTCC2148]
Length = 131
Score = 36.4 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 37/122 (30%), Gaps = 12/122 (9%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQ---FWDL 99
+++ + + G P YI V + + Y + IV+ +L
Sbjct: 10 IMRALYEWIVDNGCTP-----YILVDAAIDNVMVP----EQYVKDDQIVLNISPTAVMEL 60
Query: 100 KVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKV 159
+ ++ F V + +P +A+ G Y + F+ E +
Sbjct: 61 NISNDAVAFNGRFGGVATDIFVPVSAVIGIYARENGQGMVFEHEEEVEIPPDDTPPEPHN 120
Query: 160 LT 161
Sbjct: 121 PE 122
>gi|262395274|ref|YP_003287128.1| stringent starvation protein B [Vibrio sp. Ex25]
gi|262338868|gb|ACY52663.1| stringent starvation protein B [Vibrio sp. Ex25]
Length = 156
Score = 36.4 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 1/129 (0%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GVR+ ++ + I + +L++ ++ FS P +++P A++
Sbjct: 28 DATMPGVRVPVEFIQDGQIILNIAPRA-VGNLELGNDAITFHARFSGRPHSVIVPVYAVQ 86
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ 187
Y F+ + + E + S + S +++ +
Sbjct: 87 AIYARENGAGTMFEPEEAYTHIEEEAMTEEESSPSFTTVSDEPSELASDSDAEEDDAPRP 146
Query: 188 NKNKMASVI 196
VI
Sbjct: 147 KGKPSLRVI 155
>gi|323961123|gb|EGB56737.1| stringent starvation protein B [Escherichia coli H489]
Length = 165
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 35/117 (29%), Gaps = 7/117 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV++ Y IV+ +L++ ++ F +P ++ +P A+
Sbjct: 37 PGVQVP----MEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
Y F+ + E+ + + + D + +
Sbjct: 93 IYARENGAGTMFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDNTHPDDE 149
>gi|256821896|ref|YP_003145859.1| Stringent starvation protein B [Kangiella koreensis DSM 16069]
gi|256795435|gb|ACV26091.1| Stringent starvation protein B [Kangiella koreensis DSM 16069]
Length = 155
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 34/113 (30%), Gaps = 7/113 (6%)
Query: 65 ITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVI 121
I T+ V + + IV+ + ++ ++ FS L I
Sbjct: 28 ILVDTSHPEVDVP----LQFANDGKIVLNIAPTAVANFELNHDYISFNARFSGQSLSLYI 83
Query: 122 PFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSV 174
P +AI Y + + F ++ + + + K+ +
Sbjct: 84 PSSAIIAIYARENDQGIMFSANMYGEDSYSSEDHQSSTDSIGPAESKDNNDEG 136
>gi|312885187|ref|ZP_07744866.1| ClpXP protease specificity-enhancing factor [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309367127|gb|EFP94700.1| ClpXP protease specificity-enhancing factor [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 157
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 45/117 (38%), Gaps = 1/117 (0%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV++ ++ + + + +L++ ++ FS P +++P A++ Y
Sbjct: 37 PGVKVPLEFVQDGQIILNVAPRA-VGNLELGNDAVMFNARFSGRPHSIIVPMYAVQAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
F+ + +E +EG S + ++ ++S D + K +
Sbjct: 96 RENGAGTMFEPEEVYEQEDIEGIENATNSISIASDVEDASDSQDPDDEPPRPRGKPS 152
>gi|126643022|ref|YP_001086006.1| stringent starvation protein B [Acinetobacter baumannii ATCC 17978]
Length = 95
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 10 IVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 69
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
LE + + + K T
Sbjct: 70 LEDKLDSETQETSEPTKKKPT 90
>gi|90580213|ref|ZP_01236020.1| putative stringent starvation protein B [Vibrio angustum S14]
gi|90438515|gb|EAS63699.1| putative stringent starvation protein B [Vibrio angustum S14]
Length = 162
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 29/93 (31%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + FS P +++P A+ Y F+ + + +
Sbjct: 57 NLELGNEAVSFNARFSGRPHSVIVPMYAVLAVYARENGAGTMFEPEPSYESDMPVFDDVD 116
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ D + + ++ + ++
Sbjct: 117 DIEDMIDEASEPSSPFAVVSETETAGDEPDDEP 149
>gi|238758295|ref|ZP_04619473.1| Stringent starvation protein B [Yersinia aldovae ATCC 35236]
gi|238703418|gb|EEP95957.1| Stringent starvation protein B [Yersinia aldovae ATCC 35236]
Length = 171
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 34/128 (26%), Gaps = 7/128 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV + + + V +L++ ++ F VP ++V P A+ Y
Sbjct: 37 PGVSVPMEF-ARDGQIVLNVAPRAVGNLELGNDCVSFNARFGGVPRQVVAPMGAVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKL------EGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + + E + + + + D +
Sbjct: 96 RENGSGTMFEPEAAYDSDADGNFDSIEQDDNENMPADNLVLVTDDIRASQDDDNSPDDEP 155
Query: 186 KQNKNKMA 193
Q
Sbjct: 156 PQPPRSSG 163
>gi|319427714|gb|ADV55788.1| Stringent starvation protein B [Shewanella putrefaciens 200]
Length = 145
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 27/77 (35%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FDV ++ E
Sbjct: 60 NLQISNEFVEFNARFGGVPQQVLLPMASIIAIYARENGAGTVFDVEDAYLMEDEAESVLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
V + D
Sbjct: 120 VVDVTDKPKDPTDQPPK 136
>gi|120597500|ref|YP_962074.1| ClpXP protease specificity-enhancing factor [Shewanella sp.
W3-18-1]
gi|120557593|gb|ABM23520.1| Stringent starvation protein B [Shewanella sp. W3-18-1]
Length = 145
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 27/77 (35%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + E F VP+++++P +I Y FDV ++ E
Sbjct: 60 NLQISNEFVEFNARFGGVPQQVLLPMASIIAIYARENGAGTVFDVEDAYLMEDEAESVLS 119
Query: 158 KVLTSPDNFDKNQTNSV 174
V + D
Sbjct: 120 VVDVTDKPKDPTDQPPK 136
>gi|209696066|ref|YP_002263996.1| ClpXP protease specificity-enhancing factor [Aliivibrio salmonicida
LFI1238]
gi|208010019|emb|CAQ80342.1| stringent starvation protein B [Aliivibrio salmonicida LFI1238]
Length = 151
Score = 36.0 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 1/109 (0%)
Query: 73 GVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
GVR+ + + + + +L++ + FS P +++P AI+ Y
Sbjct: 38 GVRVPEEFI-QDGQIILNTAPHSVGNLEMGNEAVTFNARFSGRPHSIIVPIYAIQAIYAR 96
Query: 133 SVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
F+ + + EG + L S +N + + S +
Sbjct: 97 ENGAGTMFEPEEAYEMDADEGIFEDESLDSTENTLSDDKPEPPRPSGRP 145
>gi|117923456|ref|YP_864073.1| hypothetical protein Mmc1_0140 [Magnetococcus sp. MC-1]
gi|117607212|gb|ABK42667.1| hypothetical protein Mmc1_0140 [Magnetococcus sp. MC-1]
Length = 182
Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQF-WDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
V + + + + +V+ Q + V ++ E L F +P +IP+ + G ++P
Sbjct: 34 VEVPRRFAND--NSLRLVLNRQMPQTIHVGEDALESELRFGGIPHYCIIPYETLWGAFNP 91
Query: 133 SVNFELEFDVHIEHIEEK 150
+ + + + +
Sbjct: 92 DTGHGMLWPDTMPNEVRQ 109
>gi|260596156|ref|YP_003208727.1| ClpXP protease specificity-enhancing factor [Cronobacter turicensis
z3032]
gi|260215333|emb|CBA27311.1| Stringent starvation protein B [Cronobacter turicensis z3032]
Length = 163
Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 9/130 (6%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV + Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 37 PGVLVP----LEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGVPRQVSVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLE--GGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKK 186
Y F+ + EE N+ + + + + D+
Sbjct: 93 IYARENGAGTMFEPEAAYDEEMASLNDDNSAEEPETVMSVIDGDKPDDADDNGPDDEPPP 152
Query: 187 QNKNKMASVI 196
+ V+
Sbjct: 153 RGGRPALRVV 162
>gi|261868081|ref|YP_003256003.1| ClpXP protease specificity-enhancing factor [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413413|gb|ACX82784.1| stringent starvation protein B [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 153
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 7/124 (5%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLV 120
Y+ GV++ Y + IV+ N +L++ ++ + F V + +
Sbjct: 28 YLVVDATYWGVKVP----VEYVKDGQIVLNLSANATGNLQLTNDFIQFNARFRGVSQDIY 83
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
IP A Y + F+ + + + D D+ + + K
Sbjct: 84 IPLGAALAIYARENGDGVMFEPEAAYEHPEQAEEQPTGFENAVDKADQKDKSDKPKSGEK 143
Query: 181 KKST 184
K ++
Sbjct: 144 KSTS 147
>gi|53803980|ref|YP_114391.1| ClpXP protease specificity-enhancing factor [Methylococcus
capsulatus str. Bath]
gi|53757741|gb|AAU92032.1| stringent starvation protein B [Methylococcus capsulatus str. Bath]
Length = 130
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ-----NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
V + + Y ++ IV+ Q D+ + F F P R+ IP +A+
Sbjct: 32 PSVDVPR----QYVQEGRIVLNLRPQAVQHLDMNNREVTFSAR--FGGTPTRVYIPISAV 85
Query: 127 KGFYDPSVNFELEFDV 142
Y + FD
Sbjct: 86 MALYARENGQGMVFDQ 101
>gi|91228499|ref|ZP_01262421.1| stringent starvation protein B [Vibrio alginolyticus 12G01]
gi|91187933|gb|EAS74243.1| stringent starvation protein B [Vibrio alginolyticus 12G01]
Length = 161
Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 42/129 (32%), Gaps = 1/129 (0%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GVR+ ++ + I + +L++ ++ FS P +++P A++
Sbjct: 33 DATMPGVRVPVEFIQDGQIILNIAPRA-VGNLELGNDAITFHARFSGRPHSVIVPVYAVQ 91
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ 187
Y F+ + + E + S + VS +++ +
Sbjct: 92 AIYARENGAGTMFEPEEAYTHIEEEAMTEEESSPSFTTVSDEPSELVSDSDAEEDDAPRP 151
Query: 188 NKNKMASVI 196
VI
Sbjct: 152 KGKPSLRVI 160
>gi|291615969|ref|YP_003518711.1| SspB [Pantoea ananatis LMG 20103]
gi|291150999|gb|ADD75583.1| SspB [Pantoea ananatis LMG 20103]
gi|327396221|dbj|BAK13643.1| stringent starvation protein B SspB [Pantoea ananatis AJ13355]
Length = 161
Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
N GV++ Y IV+ +L + ++ F VP ++ +P AI
Sbjct: 35 NLPGVQVP----LEYARDGQIVLNIAPRAVGNLDLGNDEVSFNARFGGVPRQVNVPMAAI 90
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKV 159
Y F+ + E +
Sbjct: 91 LAIYARENGAGTMFEPEPAYEGGTQEFAENQEE 123
>gi|89074185|ref|ZP_01160684.1| putative stringent starvation protein B [Photobacterium sp. SKA34]
gi|89050121|gb|EAR55647.1| putative stringent starvation protein B [Photobacterium sp. SKA34]
Length = 167
Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 29/93 (31%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ + FS P +++P A+ Y F+ + + +
Sbjct: 62 NLELGNEAVSFNARFSGRPHSVIVPMYAVLAVYARENGAGTMFEPEPSYESDMPVFDDVD 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKN 190
+ D + + ++ + ++
Sbjct: 122 NIEDMIDEASEPSSPFAVVSETETAGDEPDDEP 154
>gi|269967399|ref|ZP_06181459.1| stringent starvation protein B [Vibrio alginolyticus 40B]
gi|269827987|gb|EEZ82261.1| stringent starvation protein B [Vibrio alginolyticus 40B]
Length = 161
Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 42/129 (32%), Gaps = 1/129 (0%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GVR+ ++ + I + +L++ ++ FS P +++P A++
Sbjct: 33 DATMPGVRVPVEFIQDGQIILNIAPRA-VGNLELGNDAITFHARFSGRPHSVIVPVYAVQ 91
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ 187
Y F+ + + E + S + VS +++ +
Sbjct: 92 AIYARENGAGTMFEPEEAYTHIEEEAMTEEESSPSFTTVSDEPSELVSDSDAEEDDAPRP 151
Query: 188 NKNKMASVI 196
VI
Sbjct: 152 KGKPSLRVI 160
>gi|124266046|ref|YP_001020050.1| ClpXP protease specificity-enhancing factor [Methylibium
petroleiphilum PM1]
gi|124258821|gb|ABM93815.1| putative stringent starvation protein B [Methylibium petroleiphilum
PM1]
Length = 178
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 33/115 (28%), Gaps = 3/115 (2%)
Query: 74 VRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFY 130
V S + Y + IV+ F L++ ++ F +V+P + + Y
Sbjct: 39 VDGSVQVPAEYVKNNEIVLNASFEATSSLQLGNDFISFKARFGGTAREIVVPIDHVIAIY 98
Query: 131 DPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
+ F E GN+ + + + D S
Sbjct: 99 ARENGQGMAFPAPPVGAEPPPAEGNSSAAEAAAAPRGLRLAETPAADPSPGDEGA 153
>gi|237749399|ref|ZP_04579879.1| stringent starvation protein B [Oxalobacter formigenes OXCC13]
gi|229380761|gb|EEO30852.1| stringent starvation protein B [Oxalobacter formigenes OXCC13]
Length = 132
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 7/98 (7%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
V++ + IV+ + LK+ + + F VP+ + IP +
Sbjct: 33 PSVKVP----IQFVRDGQIVLNVSYEATNGLKMDNTAVQFRARFGGVPQDIYIPVANVIA 88
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNF 166
Y + F++ E + + P
Sbjct: 89 IYASENGQGMAFEMTQTQPEFETPPETDKEPTKKPKQA 126
>gi|239626727|ref|ZP_04669758.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516873|gb|EEQ56739.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 384
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 13/86 (15%)
Query: 47 VLSEVASIGSLPGEHHFYITFATNARG----VRISQN-------LRKNYPEKMTIVIQNQ 95
+ L + I F + +S+ L +P+++ + +
Sbjct: 157 AVKRNQDEEYLMDDVSIIIAFNKKHKSKVFLCDMSKWTNFNMLNLLGKFPKELLLFLDPS 216
Query: 96 FWDLK--VLDNHFEVGLSFSNVPERL 119
LK V + ++ L F E L
Sbjct: 217 IEYLKCAVDEKDVDIRLKFKGKEEIL 242
>gi|260554065|ref|ZP_05826328.1| stringent starvation protein B family protein [Acinetobacter sp.
RUH2624]
gi|260404804|gb|EEW98311.1| stringent starvation protein B family protein [Acinetobacter sp.
RUH2624]
Length = 142
Score = 35.7 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 91 VIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEK 150
++ + L + ++ F V + + +P A+ G Y L FD
Sbjct: 57 IVPHAVHQLLISNDAVTFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAP 116
Query: 151 LEGGNTGKVLTSPDNFDKNQT 171
+E + + + K T
Sbjct: 117 VENTLDSEAQETSEPTKKKPT 137
>gi|292486794|ref|YP_003529664.1| stringent starvation protein B [Erwinia amylovora CFBP1430]
gi|292900807|ref|YP_003540176.1| stringent starvation protein B [Erwinia amylovora ATCC 49946]
gi|291200655|emb|CBJ47787.1| stringent starvation protein B [Erwinia amylovora ATCC 49946]
gi|291552211|emb|CBA19248.1| Stringent starvation protein B [Erwinia amylovora CFBP1430]
gi|312170862|emb|CBX79122.1| Stringent starvation protein B [Erwinia amylovora ATCC BAA-2158]
Length = 165
Score = 35.7 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 27/96 (28%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DLK+ ++ F VP ++ +P A+ Y F+ + + G
Sbjct: 62 DLKLGNDEVRFSARFGGVPRQVSVPLAAVLAIYARENGAGTMFEPEPVYDGAGEFQASNG 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA 193
+ + ++ + +
Sbjct: 122 ENEAPETVMSVIDGDRPDDKTAADDGPDDEPPPRGG 157
>gi|163749355|ref|ZP_02156604.1| stringent starvation protein b [Shewanella benthica KT99]
gi|161331074|gb|EDQ02000.1| stringent starvation protein b [Shewanella benthica KT99]
Length = 172
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 12/131 (9%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
G ++ + Y + IV+ DL++ + E F V +++V+P AI
Sbjct: 35 PGTQVP----QQYVKDGQIVLNITSTAVGDLQIGHDFIEFNARFGGVSQQVVLPMAAIIA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGN-----TGKVLTSPDNFDKNQTNSVSQDSSKKKS 183
Y FD+ + E + T D + S +
Sbjct: 91 IYARENGAGTVFDMEDAYQVEAESEAAGLSVVKPEKATLTDTKRALSSVESSLSETLVPE 150
Query: 184 TKKQNKNKMAS 194
+ K+
Sbjct: 151 SASDKKSSDPE 161
>gi|224823829|ref|ZP_03696938.1| Stringent starvation protein B [Lutiella nitroferrum 2002]
gi|224604284|gb|EEG10458.1| Stringent starvation protein B [Lutiella nitroferrum 2002]
Length = 147
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 23/85 (27%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
LK+ ++ F V + +P + + + F+V EE +
Sbjct: 58 LKIDNDWISFSARFGGVAREIWVPVANVMSIFARETGEGMGFEVEAPPAEEDVSESAPAL 117
Query: 159 VLTSPDNFDKNQTNSVSQDSSKKKS 183
+ S + S
Sbjct: 118 KPVEGPGEGTVSEAEPAPRPSGRPS 142
>gi|270158037|ref|ZP_06186694.1| stringent starvation protein B [Legionella longbeachae D-4968]
gi|289163695|ref|YP_003453833.1| stringent starvation protein B [Legionella longbeachae NSW150]
gi|269990062|gb|EEZ96316.1| stringent starvation protein B [Legionella longbeachae D-4968]
gi|288856868|emb|CBJ10679.1| putative stringent starvation protein B [Legionella longbeachae
NSW150]
Length = 137
Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 6/129 (4%)
Query: 43 LVKVVLSEVASIGSLPGEHHFYITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVL 102
L++ + P YI GV++ + N+ + + L +
Sbjct: 10 LIRAAYDWIVDNELTP-----YILVNAAYVGVQVPRE-HVNHDRIVLNISPAATRGLLLE 63
Query: 103 DNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTS 162
++ FS E++ +P A+ Y + F + E G +
Sbjct: 64 NDRIIFTARFSGKTEQIFVPPGAVLEIYAKENGRGIAFALEDEEEPPPASSGPSTSDAEG 123
Query: 163 PDNFDKNQT 171
P + +
Sbjct: 124 PVSSKSKPS 132
>gi|255066609|ref|ZP_05318464.1| stringent starvation protein B [Neisseria sicca ATCC 29256]
gi|255049193|gb|EET44657.1| stringent starvation protein B [Neisseria sicca ATCC 29256]
Length = 136
Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L + ++ F V + IP + + + F+V +K +
Sbjct: 57 NLNIDNDWISFSARFGGVAHDIWIPVGHVVSLFARESGEGMGFEVEPYEPSDKEQPEQET 116
Query: 158 KVLTSPDNFDKN 169
+ D K+
Sbjct: 117 ENKQETDAPAKS 128
>gi|59712822|ref|YP_205598.1| ClpXP protease specificity-enhancing factor [Vibrio fischeri ES114]
gi|197336328|ref|YP_002157011.1| stringent starvation protein B [Vibrio fischeri MJ11]
gi|59480923|gb|AAW86710.1| ClpXP protease specificity-enhancing factor [Vibrio fischeri ES114]
gi|197317818|gb|ACH67265.1| stringent starvation protein B [Vibrio fischeri MJ11]
Length = 154
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 1/113 (0%)
Query: 73 GVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDP 132
GVR+ + + + V + +L++ + FS P +++P AI+ Y
Sbjct: 38 GVRVPEEFV-QDGQIVLNVAPHSVGNLEMGNEAVTFNARFSGRPHSIILPLYAIQAIYAR 96
Query: 133 SVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
F+ + EG + + + D ++ +
Sbjct: 97 ENGAGTMFEPEEAYEMTDDEGIFEEETNLNAVSEDNTSSDDEPEPPRPSGRPS 149
>gi|134076745|emb|CAK39804.1| unnamed protein product [Aspergillus niger]
Length = 1247
Score = 35.3 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + +T+ D ++S+ +S + N A V LD+FR
Sbjct: 579 PKENGQAQAQPAPPSITASSTADTEPKPALSKTTSGAPAPANATSNVEAEV--LDSFR 634
>gi|301793368|emb|CBW35732.1| beta-N-acetylhexosaminidase precursor (ec 3.2.1.52)
(sortase-sorted) [Streptococcus pneumoniae INV104]
Length = 1312
Score = 35.3 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEDDKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|28871558|ref|NP_794177.1| stringent starvation protein B [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28854809|gb|AAO57872.1| stringent starvation protein B [Pseudomonas syringae pv. tomato
str. DC3000]
gi|330877149|gb|EGH11298.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. morsprunorum str. M302280PT]
gi|330964041|gb|EGH64301.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|331016718|gb|EGH96774.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 137
Score = 35.3 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
V++ + + IV+ + L + ++ F VP L +P AI
Sbjct: 31 YPSVQVP----QGFANDGQIVLNVSPSAVRHLHMDNDAVSFEGRFGGVPHTLYVPVAAIL 86
Query: 128 GFYDPSVNFELEFDVHIE 145
G Y + FD+
Sbjct: 87 GIYARENGQGMVFDLEPS 104
>gi|254468222|ref|ZP_05081628.1| stringent starvation protein B [beta proteobacterium KB13]
gi|207087032|gb|EDZ64315.1| stringent starvation protein B [beta proteobacterium KB13]
Length = 121
Score = 35.3 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 20/60 (33%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
DL + F+ V E L I +N I + L F++ + + K
Sbjct: 56 DLSFNKDDISFKARFNGVEEHLSIAYNEITAIFSKEDGDGLFFEIPANNEDFKENPNKNP 115
>gi|317030279|ref|XP_001392241.2| PAB1 binding protein (Pbp1) [Aspergillus niger CBS 513.88]
Length = 1057
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 145 EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMASVISLDNFR 202
+ + +T+ D ++S+ +S + N A V LD+FR
Sbjct: 389 PKENGQAQAQPAPPSITASSTADTEPKPALSKTTSGAPAPANATSNVEAEV--LDSFR 444
>gi|289677680|ref|ZP_06498570.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. syringae FF5]
gi|330981234|gb|EGH79337.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. aptata str. DSM 50252]
Length = 131
Score = 35.3 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
+ V++ + + IV+ + L + + F VP L +P AI
Sbjct: 30 DYPAVQVP----QGFANDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVPHTLYVPVAAI 85
Query: 127 KGFYDPSVNFELEFDVHIE 145
G Y + FD+
Sbjct: 86 LGIYARENGQGMVFDLEPS 104
>gi|167461892|ref|ZP_02326981.1| hypothetical protein Plarl_04950 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381660|ref|ZP_08055626.1| spore coat associated-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154400|gb|EFX46710.1| spore coat associated-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 252
Score = 35.3 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 56 SLPGEHHFYITFATNARGVRISQNLRKNYPE------KMTIVIQNQFWDLKVL 102
+P E H +ITF GV+ ++ L+ YP + + + W L+V
Sbjct: 171 HMPKEKHSFITFI-KKIGVKCAKQLQTKYPNLKEIGVDIAVDTDHHPWILEVN 222
>gi|317046686|ref|YP_004114334.1| Stringent starvation protein B [Pantoea sp. At-9b]
gi|316948303|gb|ADU67778.1| Stringent starvation protein B [Pantoea sp. At-9b]
Length = 161
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 8/108 (7%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
N GV++ Y IV+ +L++ ++H + F VP ++ +P AI
Sbjct: 35 NLPGVQVP----LEYARDGQIVLNIAPRAVGNLELGNDHVQFNARFGGVPRQVSVPMAAI 90
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSV 174
Y F+ E + G+ T D ++ +
Sbjct: 91 LAIYARENGAGTMFE-PEPAYELAAQDELEGQEETMMSVIDGDRPDDS 137
>gi|325123526|gb|ADY83049.1| ClpXP protease specificity-enhancing factor [Acinetobacter
calcoaceticus PHEA-2]
Length = 144
Score = 35.3 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 1/110 (0%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPF 123
Y+ + Q K+ + IV + L + + F + + +P
Sbjct: 31 YLLVDATQPYTDVPQQFVKDGQIVLNIV-PHAVHQLLITNETITFSARFGGASKDIYVPI 89
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNS 173
A+ G Y L FD +E +V + + + S
Sbjct: 90 QAVLGIYARENGQGLFFDPEEYANVTPVENTVESEVQEATETTSTKKKPS 139
>gi|261253821|ref|ZP_05946394.1| stringent starvation protein B [Vibrio orientalis CIP 102891]
gi|260937212|gb|EEX93201.1| stringent starvation protein B [Vibrio orientalis CIP 102891]
Length = 166
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 38/130 (29%), Gaps = 6/130 (4%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GVR+ ++ + I + +L++ + FS P +++P A++ Y
Sbjct: 37 PGVRVPLEFVQDGQIILNIAPRA-VGNLELGNEAITFSARFSGRPHSVIVPLYAVQAIYA 95
Query: 132 PSVNFELEFDVHI-----EHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKK 186
F+ E E T + + Q + + +
Sbjct: 96 RENGAGTMFEPEDAYMGEYEEEGIFEEDMTAEESPLSVATESEQLETSEVNDGGDDEPPR 155
Query: 187 QNKNKMASVI 196
V+
Sbjct: 156 PKGRPSLRVV 165
>gi|66047344|ref|YP_237185.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. syringae B728a]
gi|302185284|ref|ZP_07261957.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. syringae 642]
gi|63258051|gb|AAY39147.1| Stringent starvation protein B [Pseudomonas syringae pv. syringae
B728a]
gi|330895245|gb|EGH27583.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. japonica str. M301072PT]
gi|330938018|gb|EGH41798.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. pisi str. 1704B]
gi|330950242|gb|EGH50502.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
Cit 7]
gi|330973404|gb|EGH73470.1| ClpXP protease specificity-enhancing factor [Pseudomonas syringae
pv. aceris str. M302273PT]
Length = 139
Score = 35.3 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
+ V++ + + IV+ + L + + F VP L +P AI
Sbjct: 30 DYPSVQVP----QGFANDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVPHTLYVPVAAI 85
Query: 127 KGFYDPSVNFELEFDVHIE 145
G Y + FD+
Sbjct: 86 LGIYARENGQGMVFDLEPS 104
>gi|218202593|gb|EEC85020.1| hypothetical protein OsI_32316 [Oryza sativa Indica Group]
Length = 1222
Score = 34.9 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 32/97 (32%), Gaps = 7/97 (7%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV + Y IV+ +L++ ++ F VP ++ +P A+
Sbjct: 35 PGVLVP----MEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGVPRQVSVPLAAVLA 90
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDN 165
Y F+ + E+ + + + +
Sbjct: 91 IYARENGAGTMFEPEAAYDEDAIHVNDDEEAGAEGET 127
>gi|226941799|ref|YP_002796873.1| ClpXP protease specificity-enhancing factor [Laribacter
hongkongensis HLHK9]
gi|226716726|gb|ACO75864.1| SspB [Laribacter hongkongensis HLHK9]
Length = 140
Score = 34.9 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 8/77 (10%), Positives = 22/77 (28%)
Query: 99 LKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGK 158
L + ++ F + +++ +P + + + F++ E E G
Sbjct: 58 LDIGNDWISFSARFGGISQQIHVPVGNVVSIFARETGEGMGFELEDEQSEGLHALDEDGS 117
Query: 159 VLTSPDNFDKNQTNSVS 175
+ S
Sbjct: 118 DGHEAGVPPPEPSGGGS 134
>gi|298501848|ref|YP_003723788.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae TCH8431/19A]
gi|298237443|gb|ADI68574.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae TCH8431/19A]
Length = 1341
Score = 34.9 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 156 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 215
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 216 KKIVSIDAGRK 226
>gi|293611441|ref|ZP_06693736.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826225|gb|EFF84595.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 144
Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 1/110 (0%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPF 123
Y+ + Q K+ + IV + L + + F + + +P
Sbjct: 31 YLLVDATQPYTDVPQQFVKDGQIVLNIV-PHAVHQLLITNEAITFSARFGGASKDIYVPI 89
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNS 173
A+ G Y L FD +E +V + + + S
Sbjct: 90 QAVLGIYARENGQGLFFDPEEYANVTPVENTVESEVQEATETTSTKKKPS 139
>gi|262042780|ref|ZP_06015933.1| stringent starvation protein B [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039847|gb|EEW40965.1| stringent starvation protein B [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 164
Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 34/124 (27%), Gaps = 7/124 (5%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKG 128
GV + Y IV+ +L++ ++ F VP + +P A+
Sbjct: 37 PGVLVP----MEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGVPRNVSVPLAAVLA 92
Query: 129 FYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQN 188
Y F+ + E+ + S + + D+ +
Sbjct: 93 IYARENGAGTMFEPEAAYDEDVSSLNDDDVTPESESETVMSVIDGDKPDNHDDDPDETPP 152
Query: 189 KNKM 192
Sbjct: 153 PRGG 156
>gi|298230716|ref|ZP_06964397.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255269|ref|ZP_06978855.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae str. Canada
MDR_19A]
Length = 1312
Score = 34.9 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|293389906|ref|ZP_06634240.1| stringent starvation protein B [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290950440|gb|EFE00559.1| stringent starvation protein B [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 153
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 7/124 (5%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLV 120
Y+ GV++ Y + IV+ N +L++ ++ + F VP+ +
Sbjct: 28 YLVVDATYWGVKVP----VEYVKDGQIVLNLSANAIGNLQLTNDFIQFNARFRGVPQDIY 83
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSK 180
+P A Y + F+ + + + D D+ + + + K
Sbjct: 84 VPLGAALAIYARENGDGVMFESEAAYEHPEQAEEQPTGFENAGDKTDRKNKSDKLKTTEK 143
Query: 181 KKST 184
K ++
Sbjct: 144 KSTS 147
>gi|225860098|ref|YP_002741607.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae Taiwan19F-14]
gi|225728171|gb|ACO24022.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae Taiwan19F-14]
Length = 1312
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|225853692|ref|YP_002735204.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae JJA]
gi|225722880|gb|ACO18733.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae JJA]
Length = 1312
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|225857926|ref|YP_002739436.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae 70585]
gi|225720409|gb|ACO16263.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae 70585]
Length = 1320
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 135 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 194
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 195 KKIVSIDAGRK 205
>gi|237807198|ref|YP_002891638.1| Stringent starvation protein B [Tolumonas auensis DSM 9187]
gi|237499459|gb|ACQ92052.1| Stringent starvation protein B [Tolumonas auensis DSM 9187]
Length = 146
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Query: 102 LDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLT 161
+ F VP++L IP A+ + F E E T
Sbjct: 65 DNEAISFNARFGGVPQQLYIPMAAVLAIHSRENGAG-TFFPPESAYEAWQEVQPAPAEKT 123
Query: 162 SPDNFDKNQTNSVSQDSS 179
+ DK+ + +
Sbjct: 124 DVTDGDKSPSPRPDGRPT 141
>gi|168493760|ref|ZP_02717903.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC3059-06]
gi|221231005|ref|YP_002510157.1| beta-N-acetylhexosaminidase precursor [Streptococcus pneumoniae
ATCC 700669]
gi|183576016|gb|EDT96544.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC3059-06]
gi|220673465|emb|CAR67933.1| beta-N-acetylhexosaminidase precursor (ec 3.2.1.52)
(sortase-sorted) [Streptococcus pneumoniae ATCC 700669]
Length = 1312
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|327479628|gb|AEA82938.1| ClpXP protease specificity-enhancing factor [Pseudomonas stutzeri
DSM 4166]
Length = 135
Score = 34.9 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 7/88 (7%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
+ GV++ Y IV+ + L + + F V L +P A+
Sbjct: 30 DYPGVQVP----AGYASDGQIVLNVAPSAVRHLHMDNEAISFEGRFGGVAHSLNVPSAAV 85
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGG 154
Y + F++ ++
Sbjct: 86 MAIYARESGQGMVFEIEPTPPDDDAPSD 113
>gi|15902101|ref|NP_357651.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae R6]
gi|15457590|gb|AAK98861.1| Beta-N-acetyl-hexosaminidase precursor [Streptococcus pneumoniae
R6]
Length = 1312
Score = 34.9 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|146281453|ref|YP_001171606.1| ClpXP protease specificity-enhancing factor [Pseudomonas stutzeri
A1501]
gi|145569658|gb|ABP78764.1| stringent starvation protein B [Pseudomonas stutzeri A1501]
Length = 135
Score = 34.9 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 7/88 (7%)
Query: 70 NARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAI 126
+ GV++ Y IV+ + L + + F V L +P A+
Sbjct: 30 DYPGVQVP----AGYASDGQIVLNVAPSAVRHLHMDNEAISFEGRFGGVAHSLNVPSAAV 85
Query: 127 KGFYDPSVNFELEFDVHIEHIEEKLEGG 154
Y + F++ ++
Sbjct: 86 MAIYARENGQGMVFEIEPTPPDDDAPSD 113
>gi|168486690|ref|ZP_02711198.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC1087-00]
gi|183570349|gb|EDT90877.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC1087-00]
Length = 1280
Score = 34.9 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 95 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 154
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 155 KKIVSIDAGRK 165
>gi|169833911|ref|YP_001693586.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae Hungary19A-6]
gi|168996413|gb|ACA37025.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae Hungary19A-6]
Length = 1312
Score = 34.9 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|116517042|ref|YP_815512.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae D39]
gi|116077618|gb|ABJ55338.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae D39]
Length = 1312
Score = 34.9 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 EEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|307066736|ref|YP_003875702.1| hypothetical protein SPAP_0106 [Streptococcus pneumoniae AP200]
gi|306408273|gb|ADM83700.1| hypothetical protein SPAP_0106 [Streptococcus pneumoniae AP200]
Length = 1319
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 134 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 193
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 194 KKIVSIDAGRK 204
>gi|182683029|ref|YP_001834776.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CGSP14]
gi|182628363|gb|ACB89311.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CGSP14]
Length = 1341
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 156 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 215
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 216 KKIVSIDAGRK 226
>gi|332076516|gb|EGI86978.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA17545]
Length = 1312
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|307126286|ref|YP_003878317.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae 670-6B]
gi|306483348|gb|ADM90217.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae 670-6B]
gi|332077369|gb|EGI87830.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA41301]
Length = 1312
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|225855846|ref|YP_002737357.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae P1031]
gi|225725561|gb|ACO21413.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae P1031]
Length = 1311
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 126 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 185
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 186 KKIVSIDAGRK 196
>gi|148996463|ref|ZP_01824181.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP11-BS70]
gi|168576908|ref|ZP_02722750.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae MLV-016]
gi|194398622|ref|YP_002036777.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae G54]
gi|147757038|gb|EDK64077.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP11-BS70]
gi|183577430|gb|EDT97958.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae MLV-016]
gi|194358289|gb|ACF56737.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae G54]
gi|332201983|gb|EGJ16052.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA41317]
Length = 1312
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|332075723|gb|EGI86190.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA17570]
Length = 1312
Score = 34.9 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|303255508|ref|ZP_07341567.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS455]
gi|303259103|ref|ZP_07345081.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP-BS293]
gi|303260860|ref|ZP_07346809.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP14-BS292]
gi|303263187|ref|ZP_07349110.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS397]
gi|303266697|ref|ZP_07352580.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS457]
gi|303268967|ref|ZP_07354751.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS458]
gi|301801024|emb|CBW33690.1| beta-N-acetylhexosaminidase precursor (ec 3.2.1.52)
(sortase-sorted) [Streptococcus pneumoniae INV200]
gi|302597528|gb|EFL64615.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS455]
gi|302637697|gb|EFL68183.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP14-BS292]
gi|302639521|gb|EFL69978.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP-BS293]
gi|302641505|gb|EFL71868.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS458]
gi|302643775|gb|EFL74039.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS457]
gi|302646960|gb|EFL77184.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae BS397]
Length = 1312
Score = 34.9 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|168489468|ref|ZP_02713667.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP195]
gi|183572067|gb|EDT92595.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP195]
Length = 1312
Score = 34.9 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|148993897|ref|ZP_01823280.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP9-BS68]
gi|147927604|gb|EDK78630.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP9-BS68]
Length = 1312
Score = 34.9 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|221135449|ref|ZP_03561752.1| stringent starvation protein B [Glaciecola sp. HTCC2999]
Length = 164
Score = 34.9 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 23/94 (24%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+ + F P + IP +A+ Y F E
Sbjct: 62 NFHMSPEGVSFQARFGGQPHYIDIPCSAVLAIYARENGAGTVFTPDTISEESDDIIIPEE 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNK 191
+ V D+ K + K K++
Sbjct: 122 DNQVETLQSAPKELVEVKTDTPKDNAPSKTKKDR 155
>gi|784897|gb|AAC41450.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae]
Length = 1311
Score = 34.9 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 126 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 185
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 186 KKIVSIDAGRK 196
>gi|168483637|ref|ZP_02708589.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC1873-00]
gi|172042977|gb|EDT51023.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CDC1873-00]
gi|332205091|gb|EGJ19154.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA47368]
Length = 1312
Score = 34.9 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|327390470|gb|EGE88810.1| LPXTG-motif cell wall anchor domain protein [Streptococcus
pneumoniae GA04375]
Length = 1312
Score = 34.9 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|330815341|ref|YP_004359046.1| Stringent starvation protein B [Burkholderia gladioli BSR3]
gi|327367734|gb|AEA59090.1| Stringent starvation protein B [Burkholderia gladioli BSR3]
Length = 166
Score = 34.9 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 5/130 (3%)
Query: 69 TNARGVRI--SQNLRKNYPEKMTIVIQNQFWD---LKVLDNHFEVGLSFSNVPERLVIPF 123
T VR+ S + + Y IV+ F L++ + E FS +L +P
Sbjct: 24 TPHIAVRVDNSTRVPRQYVRDGEIVLNISFEATSALQMGNEWIEFTARFSGKAHKLEVPV 83
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKS 183
+ Y + F V E +P + D+ +
Sbjct: 84 ANVLAIYARENGQGMAFQVDATADEPGESAIEDDVAEAAPASADEAAREAAEPSEGADVP 143
Query: 184 TKKQNKNKMA 193
+ + A
Sbjct: 144 ASSPDDDGGA 153
>gi|149010922|ref|ZP_01832227.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP19-BS75]
gi|147764558|gb|EDK71488.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP19-BS75]
Length = 1312
Score = 34.9 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|315634322|ref|ZP_07889609.1| stringent starvation protein B [Aggregatibacter segnis ATCC 33393]
gi|315476912|gb|EFU67657.1| stringent starvation protein B [Aggregatibacter segnis ATCC 33393]
Length = 147
Score = 34.5 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 8/119 (6%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLV 120
Y+ GV++ Y + IV+ N +L++ ++ + F VP+ +
Sbjct: 28 YLVVDATYWGVKVP----VEYVKDGQIVLNLSANATGNLQLTNDFIQFNARFRGVPQDIY 83
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSS 179
IP A Y + F+ E ++ + ++ + +S
Sbjct: 84 IPMGAALAIYARENGDGVMFE-PEEAYDDHPAQAEEQPIGFEKAVDKTDKPKKTEKSTS 141
>gi|49077066|gb|AAT49631.1| PA4427 [synthetic construct]
Length = 136
Score = 34.5 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 7/104 (6%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GV++ Y IV+ + L + + F V + L IP A+
Sbjct: 31 FAGVKVPP----GYASDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVAQSLYIPALAVM 86
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQT 171
Y + FD+ + G + G P +
Sbjct: 87 AIYARENGQGMVFDLEQPGPVDDEPGDDDGGPSDEPPRPSGRPS 130
>gi|15599623|ref|NP_253117.1| ClpXP protease specificity-enhancing factor [Pseudomonas aeruginosa
PAO1]
gi|116052460|ref|YP_792773.1| ClpXP protease specificity-enhancing factor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218893518|ref|YP_002442387.1| ClpXP protease specificity-enhancing factor [Pseudomonas aeruginosa
LESB58]
gi|254238910|ref|ZP_04932233.1| stringent starvation protein B [Pseudomonas aeruginosa C3719]
gi|254244762|ref|ZP_04938084.1| stringent starvation protein B [Pseudomonas aeruginosa 2192]
gi|313106958|ref|ZP_07793161.1| stringent starvation protein B [Pseudomonas aeruginosa 39016]
gi|9950660|gb|AAG07815.1|AE004857_6 stringent starvation protein B [Pseudomonas aeruginosa PAO1]
gi|115587681|gb|ABJ13696.1| stringent starvation protein B [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170841|gb|EAZ56352.1| stringent starvation protein B [Pseudomonas aeruginosa C3719]
gi|126198140|gb|EAZ62203.1| stringent starvation protein B [Pseudomonas aeruginosa 2192]
gi|218773746|emb|CAW29560.1| stringent starvation protein B [Pseudomonas aeruginosa LESB58]
gi|310879663|gb|EFQ38257.1| stringent starvation protein B [Pseudomonas aeruginosa 39016]
Length = 135
Score = 34.5 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 7/104 (6%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GV++ Y IV+ + L + + F V + L IP A+
Sbjct: 31 FAGVKVPP----GYASDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVAQSLYIPALAVM 86
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQT 171
Y + FD+ + G + G P +
Sbjct: 87 AIYARENGQGMVFDLEQPGPVDDEPGDDDGGPSDEPPRPSGRPS 130
>gi|251791352|ref|YP_003006073.1| Stringent starvation protein B [Dickeya zeae Ech1591]
gi|247539973|gb|ACT08594.1| Stringent starvation protein B [Dickeya zeae Ech1591]
Length = 167
Score = 34.5 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 36/110 (32%), Gaps = 1/110 (0%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV++ ++ + I + +L++ D+ F VP ++ +P ++ Y
Sbjct: 37 PGVQVPMEFARDGQIVLNIAPRA-VGNLELADDSVRFDARFGGVPRQVFVPMASVMAIYA 95
Query: 132 PSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKK 181
F+ + + G S N S SS+
Sbjct: 96 RENGAGTMFEPEPAYEIVEEFGEQPHPEDESKPTLMSIVDNEPSSSSSQN 145
>gi|242241034|ref|YP_002989215.1| stringent starvation protein B [Dickeya dadantii Ech703]
gi|242133091|gb|ACS87393.1| Stringent starvation protein B [Dickeya dadantii Ech703]
Length = 165
Score = 34.5 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 39/129 (30%), Gaps = 5/129 (3%)
Query: 72 RGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYD 131
GV++ ++ + I + +L++ D+ F VP ++ +P A+ Y
Sbjct: 37 PGVQVPMEFARDGQIVLNIAPRA-VGNLELADDSVRFNARFGGVPRQVFVPMAAVMAIYA 95
Query: 132 PSVNFELEFDVHIE----HIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ 187
F+ + + + D ++ + D + +
Sbjct: 96 RENGAGTMFEPEPAYEIVEEFGEQDQIENEQKPALMSVVDNEESVNAGDDPENEPPQPPR 155
Query: 188 NKNKMASVI 196
V+
Sbjct: 156 GGRPSLRVV 164
>gi|237814045|ref|YP_002898496.1| stringent starvation protein B [Burkholderia pseudomallei MSHR346]
gi|237505893|gb|ACQ98211.1| stringent starvation protein B [Burkholderia pseudomallei MSHR346]
Length = 169
Score = 34.5 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 5/126 (3%)
Query: 69 TNARGVRI--SQNLRKNYPEKMTIVIQNQFW---DLKVLDNHFEVGLSFSNVPERLVIPF 123
T VR+ S + + + IV+ F L++ + E FS +L +P
Sbjct: 24 TPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLEVPV 83
Query: 124 NAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKS 183
+ Y + F V + + +G + V D+ ++ + +
Sbjct: 84 ANVLAIYARENGQGMAFQVDVAAEMGEADGSDALAVAEEGDDAGARHASAEAAPEPGDAA 143
Query: 184 TKKQNK 189
+
Sbjct: 144 EELPKS 149
>gi|149006777|ref|ZP_01830463.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP18-BS74]
gi|147761692|gb|EDK68656.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP18-BS74]
Length = 743
Score = 34.5 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + + A
Sbjct: 118 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETEAGKERAATVNEKLAK 177
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 178 KKIVSIDAGRK 188
>gi|111658405|ref|ZP_01409089.1| hypothetical protein SpneT_02000432 [Streptococcus pneumoniae
TIGR4]
Length = 1319
Score = 34.5 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + A
Sbjct: 134 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPATEAGKERAATVNEKLAK 193
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 194 KKIVSIDAGRK 204
>gi|82778536|ref|YP_404885.1| ClpXP protease specificity-enhancing factor [Shigella dysenteriae
Sd197]
gi|309785554|ref|ZP_07680185.1| stringent starvation B family protein [Shigella dysenteriae 1617]
gi|81242684|gb|ABB63394.1| stringent starvation protein B [Shigella dysenteriae Sd197]
gi|308926674|gb|EFP72150.1| stringent starvation B family protein [Shigella dysenteriae 1617]
Length = 165
Score = 34.5 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 8/88 (9%), Positives = 26/88 (29%)
Query: 98 DLKVLDNHFEVGLSFSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+L++ ++ F +P ++ +P A+ Y F+ + E+ +
Sbjct: 62 NLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDTSIMNDEE 121
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKSTK 185
+ ++ +
Sbjct: 122 ASADNETVMSVIDSDKPDHYDDTHPDDE 149
>gi|107099988|ref|ZP_01363906.1| hypothetical protein PaerPA_01001009 [Pseudomonas aeruginosa PACS2]
gi|152986089|ref|YP_001350335.1| ClpXP protease specificity-enhancing factor [Pseudomonas aeruginosa
PA7]
gi|296391136|ref|ZP_06880611.1| ClpXP protease specificity-enhancing factor [Pseudomonas aeruginosa
PAb1]
gi|150961247|gb|ABR83272.1| stringent starvation protein B [Pseudomonas aeruginosa PA7]
Length = 137
Score = 34.5 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 7/104 (6%)
Query: 71 ARGVRISQNLRKNYPEKMTIVIQ---NQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GV++ Y IV+ + L + + F V + L IP A+
Sbjct: 33 FAGVKVPP----GYASDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVAQSLYIPALAVM 88
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQT 171
Y + FD+ + G + G P +
Sbjct: 89 AIYARENGQGMVFDLEQPGPVDDEPGDDDGGPSDEPPRPSGRPS 132
>gi|15900002|ref|NP_344606.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae TIGR4]
gi|18266884|sp|P49610|STRH_STRPN RecName: Full=Beta-N-acetylhexosaminidase; Flags: Precursor
gi|14971522|gb|AAK74246.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae TIGR4]
Length = 1312
Score = 34.5 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPATEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|237649883|ref|ZP_04524135.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CCRI 1974]
gi|237820973|ref|ZP_04596818.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae CCRI 1974M2]
Length = 1312
Score = 34.5 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPATEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|237747242|ref|ZP_04577722.1| stringent starvation protein B [Oxalobacter formigenes HOxBLS]
gi|229378593|gb|EEO28684.1| stringent starvation protein B [Oxalobacter formigenes HOxBLS]
Length = 127
Score = 34.5 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 30/107 (28%), Gaps = 8/107 (7%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQNQFWD---LKVLDNHFEVGLSFSNVPERLV 120
YI A V +S + + IV+ + L + + + F +P+ +
Sbjct: 26 YI-----AVKVGVSAKVPLQFVRDGQIVLDISYEATSALTMDNTAIQFKARFGGIPQDIY 80
Query: 121 IPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFD 167
IP + Y + F+ + +
Sbjct: 81 IPVENVAAIYASENGQGMGFEPTEPESGTEATSKEEPVKKPTLTRIK 127
>gi|148985400|ref|ZP_01818605.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP3-BS71]
gi|147922358|gb|EDK73478.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP3-BS71]
gi|301799238|emb|CBW31756.1| beta-N-acetylhexosaminidase precursor (ec 3.2.1.52)
(sortase-sorted) [Streptococcus pneumoniae OXC141]
Length = 1308
Score = 34.5 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPATEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|215919243|ref|NP_820726.2| ClpXP protease specificity-enhancing factor [Coxiella burnetii RSA
493]
gi|206584127|gb|AAO91240.2| stringent starvation protein B [Coxiella burnetii RSA 493]
Length = 134
Score = 34.5 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 3/108 (2%)
Query: 64 YITFATNARGVRISQNLRKNYPEKMTIVIQNQFWD-LKVLDNHFEVGLSFSNVPERLVIP 122
YI V + + +N K+ + I+ Q L++ ++ E FS V + IP
Sbjct: 24 YIMVDALMPDVEVPERFVEN--GKIVLNIEPQAVGRLRMGNDAVEFDARFSGVAHHIFIP 81
Query: 123 FNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQ 170
AIK Y + F + + + + P +
Sbjct: 82 VRAIKAIYAFENGRGMVFTEDEDGGNDGRTSPPSNSSVYKPVKKGRPN 129
>gi|308126059|ref|ZP_05907576.2| stringent starvation protein B [Vibrio parahaemolyticus AQ4037]
gi|308107138|gb|EFO44678.1| stringent starvation protein B [Vibrio parahaemolyticus AQ4037]
Length = 155
Score = 34.5 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 45/124 (36%), Gaps = 1/124 (0%)
Query: 68 ATNARGVRISQNLRKNYPEKMTIVIQNQFWDLKVLDNHFEVGLSFSNVPERLVIPFNAIK 127
GVR+ ++ + I + +L++ ++ FS P +++P A++
Sbjct: 28 DATMPGVRVPVEFVQDGQIILNIAPRA-VGNLELGNDAITFHARFSGRPHSVIVPVYAVQ 86
Query: 128 GFYDPSVNFELEFDVHIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQ 187
Y F+ + + E + S + + + +S ++++ + +
Sbjct: 87 AIYARENGAGTMFEPEEAYTHIEEETIEEEDLSPSFKAVTEETSEEIGAESQEEEAPRPK 146
Query: 188 NKNK 191
+
Sbjct: 147 GRPS 150
>gi|149023490|ref|ZP_01836079.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP23-BS72]
gi|149025563|ref|ZP_01836492.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP23-BS72]
gi|147929365|gb|EDK80363.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP23-BS72]
gi|147929813|gb|EDK80803.1| beta-N-acetylhexosaminidase [Streptococcus pneumoniae SP23-BS72]
Length = 1312
Score = 34.5 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 10/71 (14%)
Query: 143 HIEHIEEKLEGGNTGKVLTSPDNFDKNQTNSVSQDSSKKKSTKKQNKNKMA--------- 193
E +K E ++ D DK++ + ++ + + A
Sbjct: 127 AEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPATEAGKERAATVNEKLAK 186
Query: 194 -SVISLDNFRK 203
++S+D RK
Sbjct: 187 KKIVSIDAGRK 197
>gi|332994387|gb|AEF04442.1| stringent starvation protein B [Alteromonas sp. SN2]
Length = 151
Score = 34.5 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 26/87 (29%), Gaps = 7/87 (8%)
Query: 105 HFEVGLS-------FSNVPERLVIPFNAIKGFYDPSVNFELEFDVHIEHIEEKLEGGNTG 157
+F + L+ F P RL +P AI Y F E +
Sbjct: 60 NFSLDLTGLSFQARFGGQPRRLSMPSEAIMAIYARENGAGTVFATEEEMAKTSKPSEPQA 119
Query: 158 KVLTSPDNFDKNQTNSVSQDSSKKKST 184
S ++ D + + K K T
Sbjct: 120 TGPASIEDVDASDNTNAPVPPKKGKPT 146
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.149 0.474
Lambda K H
0.267 0.0455 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,359,526,893
Number of Sequences: 14124377
Number of extensions: 127378319
Number of successful extensions: 281901
Number of sequences better than 10.0: 640
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 280975
Number of HSP's gapped (non-prelim): 737
length of query: 204
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 72
effective length of database: 2,978,375,866
effective search space: 214443062352
effective search space used: 214443062352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 78 (34.5 bits)