HHsearch alignment for GI: 254780956 and conserved domain: PRK00956
>PRK00956 thyA thymidylate synthase; Provisional.
Probab=100.00 E-value=0 Score=388.90 Aligned_cols=196 Identities=22% Similarity=0.408 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHCCCEECCCCCCCEEEEEECEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
Q ss_conf 79999999986392603799853477761204644236981046420226889999999853666468886400321356
Q gi|254780956|r 3 QYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWDE 82 (264)
Q Consensus 3 qYl~l~~~il~~G~~~~dRtG~~t~s~fg~~~~~dl~~gfPllTtkk~~~k~~i~EllW~l~G~tn~~~l~~~~~~iWd~ 82 (264)
T Consensus 12 Ay~~~l~~Il~~G~~~~~~~G~~tkel~~~~-----------~~i~~p~~~~i~~~~~~---~~~~l---~~y~~~~~-- 72 (208)
T PRK00956 12 AWERLVPKIMNHGEEITDERGSKTKEIMNLI-----------IEITNPSDKSIPEKYPW---GEERL---EEYTKQLL-- 72 (208)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEECCEE-----------EEECCCCCCCCCCCCCC---CHHHH---HHHHHHCC--
T ss_conf 9999999999839643489886878814638-----------99878642564654676---77899---99998655--
Q ss_pred HHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCEEEEECCCEEEEE
Q ss_conf 54210013876620100036775326889999999998088523677751698883202421135402466768805999
Q gi|254780956|r 83 WADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYVDNGKLSCQ 162 (264)
Q Consensus 83 ~a~~~g~lg~~YG~qwR~~~~~~~~~~DQl~~vi~~Lk~np~sRR~i~~~wnp~~~~~~~lpPC~~~~qf~v~~g~L~~~ 162 (264)
T Consensus 73 -~~~~~~~~y~YG~r~r~~~g----~~DQi~~vi~~Lk~~p~sRR~i~~~wnp~~~~~~~~~PC~~~~qf~v~~~kL~~~ 147 (208)
T PRK00956 73 -SGENQGFVYTYGERLREYPG----DVDQIDYIVEKLKEQPNSRRATAVTWDPPIDTKVDEVPCLQLVQFLIRDNKLYLT 147 (208)
T ss_pred -CCCCCCCCCCHHHHHHHCCC----CCHHHHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCCCCEEEEEEECCEEEEE
T ss_conf -77679727746679971899----8419999999970599962699985881222157898996189999949928999
Q ss_pred EEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHCC
Q ss_conf 972624402220216799999999999762242111135227302100368999998336
Q gi|254780956|r 163 LYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLSR 222 (264)
Q Consensus 163 ~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~~d~HIY~nH~~~vk~ql~R 222 (264)
T Consensus 148 ~~~RS~D~~lg~p~Ni~~~~~L~~~iA~~~gl~~G~~~~~~~~~HIY~~h~~~v~~~lk~ 207 (208)
T PRK00956 148 VLFRSNDAGGAFPANAIGLIKLGEYVAEKVGVEPGTYTHHSVSAHIYEHDWDKLEKIIKG 207 (208)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECHHHHHHHHHHHCC
T ss_conf 985624331455516999999999999883994059999975379848789999998746