HHsearch results for GI: 254780956 and protein with PDBid: 1hw4_A
>1hw4_A TS, thymidylate synthase; methyltransferase; HET: CME; 2.06A {Homo sapiens} SCOP: d.117.1.1
Probab=100.00 E-value=0 Score=744.64 Aligned_cols=263 Identities=49% Similarity=0.961 Sum_probs=257.9
Q ss_pred HHHHHHHHHHHHCCCEECCCCCCCEEEEEECEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH
Q ss_conf 57999999998639260379985347776120464423698104642022688999999985366646888640032135
Q gi|254780956|r 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELLWFLRGDSNVSYLHRHGVSIWD 81 (264)
Q Consensus 2 ~qYl~l~~~il~~G~~~~dRtG~~t~s~fg~~~~~dl~~gfPllTtkk~~~k~~i~EllW~l~G~tn~~~l~~~~~~iWd 81 (264)
+|||+|+++||++|+.++||||++|+|+||++|||||++|||||||||||||++++||||||||+||+++|+++|++|||
T Consensus 73 ~qYl~ll~~IL~~G~~~~dRTG~gT~SvFG~~~rfdL~~gFPlLTTKkv~~K~ii~ELLWfLsGstni~~L~e~~v~IWd 152 (355)
T 1hw4_A 73 LQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWD 152 (355)
T ss_dssp HHHHHHHHHHHHHCEEEECTTSCEEEEEEEEEEEEECSSCCCCCSSSCCCHHHHHHHHHHHHTTCCBHHHHHTTTC----
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
T ss_conf 99999999999869856898998558861446897367798503433214788999999999679738888744551205
Q ss_pred HHHHH------------HCCCCCCCCCHHHCCC--------CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHC
Q ss_conf 65421------------0013876620100036--------775326889999999998088523677751698883202
Q gi|254780956|r 82 EWADK------------DGELGPIYGVQWRSWP--------DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKM 141 (264)
Q Consensus 82 ~~a~~------------~g~lg~~YG~qwR~~~--------~~~~~~~DQl~~vi~~Lk~np~sRR~i~~~wnp~~~~~~ 141 (264)
+|+++ +|++||+||+|||+|+ +|.++++|||++||++||+||+|||+|+++|||+++++|
T Consensus 153 ~n~~~~~~d~~~~~~~e~GdlGpiYG~QwR~~g~~y~~~~~~y~g~giDQl~~vI~~Lk~nP~SRR~iis~Wnp~dl~~~ 232 (355)
T 1hw4_A 153 ANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLM 232 (355)
T ss_dssp ------------------CBCCSCHHHHHHHBTSCCCCTTSCCTTCSBCHHHHHHHHHHHCTTCSCCEEEECCGGGTTTS
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCC
T ss_conf 61024466640432323686653035677643777655544467875889999999876489835045311788897346
Q ss_pred CCCCCCCCEEEEECCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHC
Q ss_conf 42113540246676880599997262440222021679999999999976224211113522730210036899999833
Q gi|254780956|r 142 ALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHFEQADLQLS 221 (264)
Q Consensus 142 ~lpPC~~~~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~y~lL~~~iA~~~gl~~G~~~~~~~d~HIY~nH~~~vk~ql~ 221 (264)
+|||||+.+||+|++|+|+|++||||||+|||+||||++|++|++|||++||++||+|+|++||+|||+||+|++++||+
T Consensus 233 ~lpPCh~~~qF~v~~gkL~l~v~qRS~D~~LG~PfNi~syalL~~miA~~~gl~~G~~~h~~gd~HIY~nHie~vkeqL~ 312 (355)
T 1hw4_A 233 ALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQ 312 (355)
T ss_dssp SSCCCSEEEEEEEETTEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEGGGHHHHHHHTT
T ss_pred CCCCCCEEEEEEECCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHHHHHHHHHHC
T ss_conf 78643078999973786358899603114432132199999999999998477566599995665762867999999957
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 6987687799648868711262033799768768887875569
Q gi|254780956|r 222 RSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264 (264)
Q Consensus 222 R~p~~~P~L~i~~~~~~i~d~~~eDf~L~~Y~~hp~Ik~~mAV 264 (264)
|+|+++|+|+|++++++|+||++|||+|+||+|||+|||||||
T Consensus 313 R~P~~~P~L~in~~~~~i~d~~~~Df~L~~Y~~hp~Ik~~mAV 355 (355)
T 1hw4_A 313 REPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV 355 (355)
T ss_dssp SCCCCCCEEEECSCCCSGGGCCGGGEEEESCCCCCCCCCC---
T ss_pred CCCCCCCEEEECCCCCCCCCCCHHHEEEECCCCCCCCCCCCCC
T ss_conf 8998998558589988412588638799798789888867619