RPSBLAST alignment of GI: 254780956 and protein with PDBid: 1f28
>1f28_A Thymidylate synthase; beta-sheet, protein-inhibitor complex, transferase; HET: UMP F89; 1.90A {Pneumocystis carinii} SCOP: d.117.1.1 PDB: 1ci7_A* Length = 297
Score = 382 bits (982), Expect = e-107
Identities = 131/291 (45%), Positives = 182/291 (62%), Gaps = 28/291 (9%)
Query: 2 HQYLDLLRHVIKFGSDRRDRTGVGTRSTFG-YQMRFDL-SKGFPLLTTKKVHWKSVVHEL 59
QYL+L++++I G DR DRTG GT S F ++F L +K FPLLTTK+V + V+ EL
Sbjct: 7 QQYLNLVQYIINHGEDRPDRTGTGTLSVFAPSPLKFSLRNKTFPLLTTKRVFIRGVIEEL 66
Query: 60 LWFLRGDSNVSYLHRHGVSIWDEWA------------DKDGELGPIYGVQWRSWP----- 102
LWF+RG+++ L + IWD ++G+LGPIYG QWR +
Sbjct: 67 LWFIRGETDSLKLREKNIHIWDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHFGAEYID 126
Query: 103 ---DYDGNVIDQISSIVQSLRADPYSRRHIVSAWNVALIDKMALPPCHCLFQFYV----- 154
+Y G +DQ+++I+Q +R PY RR I+SAWN A ++KMALPPCH QFYV
Sbjct: 127 CKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFYVHIPSN 186
Query: 155 -DNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLASVIGFQYGEFIHTLGDVHLYNNHF 213
+LSCQLYQRS D+ LG+PFNIASY+LLT M+A V G+FIH +GD H+Y +H
Sbjct: 187 NHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHI 246
Query: 214 EQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLRSYEPHAAILAKVSV 264
E QL+RSPR P + +N +I D+ F +DF +++Y P+ I K+S+
Sbjct: 247 EALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI 297