RPSBLAST alignment of GI: 254780956 and protein with PDBid: 3ik0

>3ik0_A TS, tsase, thymidylate synthase; transferase, nucleotide synthase, methyltransferase, nucleot biosynthesis; HET: 7C1 UMP; 2.10A {Lactobacillus casei} PDB: 1lcb_A* 1lce_A* 1lca_A* 1thy_A* 1tsl_A* 1tsm_A* 2tdm_A* 3bnz_A* 3byx_A* 3bz0_A* 3c06_A* 3c0a_A* 1nje_A* 3ijz_A* 3ik1_A* 4tms_A 1tsy_A* 1tsz_A 1tdb_A* 1tda_A* ... Length = 316
 Score =  341 bits (876), Expect = 9e-95
 Identities = 144/314 (45%), Positives = 186/314 (59%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
              YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELL
Sbjct: 3   EQPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIWD--------------------------------------- 81
           WFL GD+N+ +L +H   IWD                                       
Sbjct: 63  WFLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEM 122

Query: 82  -----------EWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                       +A K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSRR IV
Sbjct: 123 AKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRRLIV 182

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 183 SAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAH 242

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L 
Sbjct: 243 ECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLL 302

Query: 251 SYEPHAAILAKVSV 264
           +Y+P+ AI A V+V
Sbjct: 303 NYDPYPAIKAPVAV 316