RPSBLAST alignment of GI: 254780956 and SCOP domain: d1tswa_

Alignment
>d1tswa_ d.117.1.1 (A:) Thymidylate synthase {Lactobacillus casei [TaxId: 1582]} Length = 316
 Score =  298 bits (765), Expect = 2e-82
 Identities = 143/314 (45%), Positives = 185/314 (58%), Gaps = 50/314 (15%)

Query: 1   MHQYLDLLRHVIKFGSDRRDRTGVGTRSTFGYQMRFDLSKGFPLLTTKKVHWKSVVHELL 60
              YLDL + V+  G  + DRT  GT S FG+QMRFDLSKGFPLLTTKKV +  +  ELL
Sbjct: 3   EQPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLIKSELL 62

Query: 61  WFLRGDSNVSYLHRHGVSIW---------------------------------------- 80
           WFL GD+N+ +L +H   IW                                        
Sbjct: 63  WFLHGDTNIRFLLQHRNHIWDEWAFEKWVKSDEYHGPDMTDFGHRSQKDPEFAAVYHEEM 122

Query: 81  ----------DEWADKDGELGPIYGVQWRSWPDYDGNVIDQISSIVQSLRADPYSRRHIV 130
                     D +A K G+LG +YG QWR+W    G+ IDQ+  +++ ++  PYSR  IV
Sbjct: 123 AKFDDRVLHDDAFAAKYGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQIKTHPYSRALIV 182

Query: 131 SAWNVALIDKMALPPCHCLFQFYVDNGKLSCQLYQRSGDVFLGIPFNIASYSLLTMMLAS 190
           SAWN   +  MALPPCH L+QFYV++GKLS QLYQRS D+FLG+PFNIASY+LLT ++A 
Sbjct: 183 SAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAH 242

Query: 191 VIGFQYGEFIHTLGDVHLYNNHFEQADLQLSRSPRTLPQMIINPNIVDLLSFRYEDFTLR 250
             G + GEFIHT GD HLY NH +Q   QLSR+PR  P + +NP+  D+  F  +D  L 
Sbjct: 243 ECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLL 302

Query: 251 SYEPHAAILAKVSV 264
           +Y+P+ AI A V+V
Sbjct: 303 NYDPYPAIKAPVAV 316

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thymidylate synthase/dCMP hydroxymethylase
superfamily: Thymidylate synthase/dCMP hydroxymethylase
family: Thymidylate synthase/dCMP hydroxymethylase
domain: Thymidylate synthase
species: Lactobacillus casei [TaxId: 1582]