HHsearch alignment for GI: 254780957 and conserved domain: cd00209
>cd00209 DHFR Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.
Probab=100.00 E-value=0 Score=347.24 Aligned_cols=157 Identities=45% Similarity=0.781 Sum_probs=143.0
Q ss_pred EEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC-CCCCCCEEEEEEECCCCCCCCCCCEEEEC
Q ss_conf 99999971797685626768778899999999708987999711113434-56689638999214774345689859990
Q gi|254780957|r 6 IILIAAITRNNVIGSCGGMPWKISSDLKRFKSLTTGNPVVMGYRTFQSIG-RLLPGRTNIIITRDNTRRASVNPEAVLAS 84 (176)
Q Consensus 6 i~~I~A~~~n~~IG~~~~lPW~~~~Dl~~Fk~~T~~~~vimGrkT~~sl~-~pLp~R~niVlTr~~~~~~~~~~~~~~~~ 84 (176)
T Consensus 1 i~lIvA~~~~~~IG~~~~lPW~~~~Dl~~F~~~T~~~~viMGr~T~esip~~pLp~R~niVlSr~~~~~~--~~~~~~~~ 78 (158)
T cd00209 1 ISLIVAVDENGVIGKDNKLPWHLPEDLKHFKKTTTGNPVIMGRKTFESIPRRPLPGRTNIVLSRQLDYQD--AEGVEVVH 78 (158)
T ss_pred CEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCCCCC--CCCCEECC
T ss_conf 9899998899956379962550889999999981798099966733324655689955999971788777--89818629
Q ss_pred CHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCEEEEEEECCCCCCCEECCCCCHHHEEEEEEEEEECCCCCCCCCEEE
Q ss_conf 18898876323798459997108899874200589999877386278476657895560898566510268888873699
Q gi|254780957|r 85 SILDSLDLASKTGSKKIFIIGGGEIYAQTISLAHTLYITHIEKEIEGDVFFPSIDSNIWKKQEKEIITSAGEGDDYPTRF 164 (176)
Q Consensus 85 s~~~al~~~~~~~~~~i~IIGG~~IY~~~l~~~d~l~iT~I~~~~egD~~fP~id~~~~~~~~~~~~~~~~e~n~~~y~f 164 (176)
T Consensus 79 s~~~~l~~~~-~~~~~i~IiGG~~iY~~~l~~~d~i~lT~I~~~~~~D~~fp~~~~~~~~~~~~~---~~~~~~~~~~~f 154 (158)
T cd00209 79 SLEEALELAE-NTVEEIFVIGGAEIYKQALPYADRLYLTRIHAEFEGDTFFPEIDESEWELVSEE---EVFEEDGYSYTF 154 (158)
T ss_pred CHHHHHHHHH-CCCCEEEEECHHHHHHHHHHHCCEEEEEEECCCCCCCEECCCCCHHHCEEEEEE---ECCCCCCCCCEE
T ss_conf 9999999976-678849995789999999986197999987861068878899997888999977---314779985089
Q ss_pred EEEE
Q ss_conf 9999
Q gi|254780957|r 165 VIYD 168 (176)
Q Consensus 165 ~~y~ 168 (176)
T Consensus 155 ~~y~ 158 (158)
T cd00209 155 ETYE 158 (158)
T ss_pred EEEC
T ss_conf 9849