HHSEARCH alignment of GI: 254780957 and SCOP domain: d1ra9a_

Alignment
>d1ra9a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=358.44  Aligned_cols=159  Identities=36%  Similarity=0.645  Sum_probs=144.8

Q ss_pred             CEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEC
Q ss_conf             19999997179768562676877889999999970898799971111343456689638999214774345689859990
Q gi|254780957|r    5 EIILIAAITRNNVIGSCGGMPWKISSDLKRFKSLTTGNPVVMGYRTFQSIGRLLPGRTNIIITRDNTRRASVNPEAVLAS   84 (176)
Q Consensus         5 ~i~~I~A~~~n~~IG~~~~lPW~~~~Dl~~Fk~~T~~~~vimGrkT~~sl~~pLp~R~niVlTr~~~~~~~~~~~~~~~~   84 (176)
                      +|++|||+++||+||++|+|||++|+||+|||++|+|++||||||||+|||+|||+|.||||||+....    +.+.+..
T Consensus         1 mi~~I~A~~~~~~IG~~~~lPW~~~~Dl~~Fk~~T~~~~viMGrkT~esl~~~Lp~R~niVls~~~~~~----~~~~~~~   76 (159)
T d1ra9a_           1 MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTD----DRVTWVK   76 (159)
T ss_dssp             CEEEEEEECGGGEEECSSCCSCCCHHHHHHHHHHHTTSCEEEEHHHHHHHCSCCTTSCEEEECSSCCSC----TTSEEES
T ss_pred             CEEEEEEECCCCCEECCCCCCEECHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCEEEEEECCCCC----CCCCCHH
T ss_conf             989999997999450799515148999999885148977998151835546537998129985067754----3200013


Q ss_pred             CHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCEEEEEEECCCCCCCEECCCCCHHHEEEEEEEEEECCCCCCCCCEEE
Q ss_conf             18898876323798459997108899874200589999877386278476657895560898566510268888873699
Q gi|254780957|r   85 SILDSLDLASKTGSKKIFIIGGGEIYAQTISLAHTLYITHIEKEIEGDVFFPSIDSNIWKKQEKEIITSAGEGDDYPTRF  164 (176)
Q Consensus        85 s~~~al~~~~~~~~~~i~IIGG~~IY~~~l~~~d~l~iT~I~~~~egD~~fP~id~~~~~~~~~~~~~~~~e~n~~~y~f  164 (176)
                      ++++++....  ..++||||||++||++++++||++|+|+|+.+|+||+|||+++.+.|+++.++. ...+++|+++|+|
T Consensus        77 ~~~~~~~~~~--~~~~i~ViGG~~IY~~~l~~~d~i~lT~I~~~~egD~~FP~~d~~~w~~v~~~~-~~~~~~~~~~y~f  153 (159)
T d1ra9a_          77 SVDEAIAACG--DVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEF-HDADAQNSHSYCF  153 (159)
T ss_dssp             SHHHHHHTTC--SCSCEEECCCHHHHHHHGGGCSEEEEEEECCCCCCSEECCCCCGGGEEEEEEEE-ECCCSSCSSCEEE
T ss_pred             HHHHHHHHHH--CCCCEEEECCCHHHHHHHHHCCEEEEEEECCCCCCCEECCCCCHHHCEEEEEEE-CCCCCCCCCCEEE
T ss_conf             2788999860--687439976805999886550789999847642684468999868989999997-2667789986799


Q ss_pred             EEEEEE
Q ss_conf             999980
Q gi|254780957|r  165 VIYDRF  170 (176)
Q Consensus       165 ~~y~R~  170 (176)
                      ++|+|+
T Consensus       154 ~~y~RK  159 (159)
T d1ra9a_         154 EILERR  159 (159)
T ss_dssp             EEEEEC
T ss_pred             EEEECC
T ss_conf             999869


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Dihydrofolate reductase-like
superfamily: Dihydrofolate reductase-like
family: Dihydrofolate reductases
domain: Dihydrofolate reductase, prokaryotic type
species: Escherichia coli [TaxId: 562]