HHsearch alignment for GI: 254780958 and conserved domain: PRK10930
>PRK10930 FtsH protease regulator HflK; Provisional.
Probab=100.00 E-value=0 Score=765.89 Aligned_cols=338 Identities=32% Similarity=0.504 Sum_probs=308.5
Q ss_pred CCCCCCC------CCCCCCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC-----------------CCCH
Q ss_conf 9988899------999778777-----77889999988998999999998721168877-----------------6437
Q gi|254780958|r 1 MSYDKNN------SDWRPTRLS-----GSNGNGDGLPPFDVEAIIRYIKDKFDLIPFFK-----------------SYGS 52 (355)
Q Consensus 1 M~wn~~~------~p~~~~~~~-----~~~~~~~~~~p~dlde~~~~~~~~~~~~~~~~-----------------~~~~ 52 (355)
T Consensus 1 MaWNePg~ng~~kDPWG~~~~~~~~~g~~~~gg~~qgPPDLDE~~rkl~~kl~~l~gg~g~g~gggg~~~~~~~~~~~~~ 80 (419)
T PRK10930 1 MAWNQPGNNGQDRDPWGSSKPGGNSGGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRV 80 (419)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99888999888899988899888877777877777999999999999999861013789999999988888887754118
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEE
Q ss_conf 99999999999999742145388999998753311355589836645753236872204899982672211476650366
Q gi|254780958|r 53 VYIILLLIGSFCAFQSIYIVHPDERAVELRFGKPKNDVFLPGLHMMFWPIDQVEIVKVIERQQKIGGRSASVGSNSGLIL 132 (355)
Q Consensus 53 i~ii~~v~~~~~~~sg~~~V~~ge~gVv~rfGk~~~~v~~pGlh~~~ppi~~v~~v~v~~~~~~~~~~~~~~~~~~~~mL 132 (355)
T Consensus 81 i~iv~~~lv~~Wl~sGfY~V~~~E~gVVlRFGky~~t-~~PGLhw~p~pIe~V~~VnV~~vR---------~~~~~~lML 150 (419)
T PRK10930 81 VTIAAAAVVIIWAASGFYTIKEAERGVVTRFGKFSHL-VEPGLNWKPTFIDEVKPVNVEAVR---------ELAASGVML 150 (419)
T ss_pred HHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCC-CCCCCCCCCCCCCEEEEECCEECC---------CCCCCCCEE
T ss_conf 9999999999999822599776513787861451102-089877536775549984452102---------456566025
Q ss_pred ECCCEEEEEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 06841887634434221588785320129899998887776777753010000015546788777999988863123461
Q gi|254780958|r 133 TGDQNIVGLHFSVLYVVTDPRLYLFNLENPGETLKQVSESAMREVVGRRFAVDIFRSQRQQIALEVRNLIQKTMDYYKSG 212 (355)
Q Consensus 133 T~D~n~V~v~~~V~yrI~Dp~~~~~~v~~~~~~l~~~~esalR~vvg~~~~d~ilt~~R~~i~~~v~~~lq~~l~~y~~G 212 (355)
T Consensus 151 T~DeNIVdV~~~VQYrI~dp~~yLFnv~dPe~tlr~aaESAmReVVG~~~~d~vLT~gR~~Ia~~v~~~lQ~~Ld~Y~~G 230 (419)
T PRK10930 151 TSDENVVRVEMNVQYRVTDPEKYLFSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMG 230 (419)
T ss_pred ECCCCEEEEEEEEEEEECCHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 07887698778999995685781364578768999999999999976364899964888999999999999999850899
Q ss_pred EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79875343015625789999999988788999999999999998776889999999977789999999972322999999
Q gi|254780958|r 213 ILINTISIEDASPPREVADAFDEVQRAEQDEDRFVEESNKYSNRVLGSARGEASHIRESSIAYKDRIIQEAQGEADRFLS 292 (355)
Q Consensus 213 I~V~~V~i~~v~~P~~v~~A~~~v~~A~qe~er~i~eAe~~a~~i~~~A~geA~~i~~~Aeay~~~~i~~A~gea~rf~~ 292 (355)
T Consensus 231 I~I~~V~lq~a~PP~~V~~AF~DV~~ArqD~er~ineA~aYaN~iiP~ArG~A~rii~eAeaYk~~vV~~A~Gea~RF~~ 310 (419)
T PRK10930 231 ITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILEAQGEVARFAK 310 (419)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999884678998889999999999998899999999999975351321389999999999999999964535999999
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECHHHHHHCCCCCC
Q ss_conf 99999869999999999999999837995999967998475403479720245655
Q gi|254780958|r 293 IYGQYVNAPTLLRKRIYLETMEGILKKAKKVIIDKKQSVMPYLPLNEAFSRIQTKR 348 (355)
Q Consensus 293 i~~~Y~~ap~vt~~rlylet~~~vl~~~~k~ii~~~~~~~~yLpl~~~~~~~~~~~ 348 (355)
T Consensus 311 ll~eY~kAP~VTR~RLYLEtme~Vls~~~KVivD~~g~n~~yLPLDkl~~~~~~~~ 366 (419)
T PRK10930 311 LLPEYKAAPEITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPA 366 (419)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHCCCCCC
T ss_conf 99999868699999999999999973698799977998047533799974678875