HHsearch alignment for GI: 254780958 and conserved domain: PRK10930

>PRK10930 FtsH protease regulator HflK; Provisional.
Probab=98.42  E-value=1e-05  Score=57.37  Aligned_cols=243  Identities=13%  Similarity=0.126  Sum_probs=125.0

Q ss_pred             CCCC---CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----------------CCCCCCCCCHHHHHHHHHHH
Q ss_conf             9888---9999977877777889999988998999999998721----------------16887764379999999999
Q gi|254780958|r    2 SYDK---NNSDWRPTRLSGSNGNGDGLPPFDVEAIIRYIKDKFD----------------LIPFFKSYGSVYIILLLIGS   62 (355)
Q Consensus         2 ~wn~---~~~p~~~~~~~~~~~~~~~~~p~dlde~~~~~~~~~~----------------~~~~~~~~~~i~ii~~v~~~   62 (355)
T Consensus        15 PWG~~~~~~~~~g-~~~~gg~~qgPPDLDE~~rkl~~kl~~l~gg~g~g~gggg~~~~~~~~~~~~~i~iv~~~lv~~Wl   93 (419)
T PRK10930         15 PWGSSKPGGNSGG-NGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAVVIIWA   93 (419)
T ss_pred             CCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             9888998888777-778777779999999999999998610137899999999888888877541189999999999999


Q ss_pred             HHHHH-------------H--HHCCCHHHHHHHHHHHHHCCCCCCCCCE-ECCCCCCEEEEEEEEEEEEEECCCCCCCCC
Q ss_conf             99997-------------4--2145388999998753311355589836-645753236872204899982672211476
Q gi|254780958|r   63 FCAFQ-------------S--IYIVHPDERAVELRFGKPKNDVFLPGLH-MMFWPIDQVEIVKVIERQQKIGGRSASVGS  126 (355)
Q Consensus        63 ~~~~s-------------g--~~~V~~ge~gVv~rfGk~~~~v~~pGlh-~~~ppi~~v~~v~v~~~~~~~~~~~~~~~~  126 (355)
T Consensus        94 ~sGfY~V~~~E~gVVlRFGky~~t~~PG-----Lhw----~---p~pIe~V~~VnV~~vR~~~~~~lML--------T~D  153 (419)
T PRK10930         94 ASGFYTIKEAERGVVTRFGKFSHLVEPG-----LNW----K---PTFIDEVKPVNVEAVRELAASGVML--------TSD  153 (419)
T ss_pred             HCEEEEECCCCEEEEEECCCCCCCCCCC-----CCC----C---CCCCCEEEEECCEECCCCCCCCCEE--------ECC
T ss_conf             8225997765137878614511020898-----775----3---6775549984452102456566025--------078


Q ss_pred             CCEEEEECCCEEEEEEEE------EEEEECCHHHHHHHHCCHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf             650366068418876344------34221588785320129899998887-77677775301000001554678877799
Q gi|254780958|r  127 NSGLILTGDQNIVGLHFS------VLYVVTDPRLYLFNLENPGETLKQVS-ESAMREVVGRRFAVDIFRSQRQQIALEVR  199 (355)
Q Consensus       127 ~~~~mLT~D~n~V~v~~~------V~yrI~Dp~~~~~~v~~~~~~l~~~~-esalR~vvg~~~~d~ilt~~R~~i~~~v~  199 (355)
T Consensus       154 eN-I-VdV---~~~VQYrI~dp~~yLFnv~dPe~tlr~aa--ESAmReVVG~~~~d~vLT~gR-~~-I---a~~v~~~lQ  221 (419)
T PRK10930        154 EN-V-VRV---EMNVQYRVTDPEKYLFSVTSPDDSLRQAT--DSALRGVIGKYTMDRILTEGR-TV-I---RSDTQRELE  221 (419)
T ss_pred             CC-E-EEE---EEEEEEEECCHHHHEEECCCHHHHHHHHH--HHHHHHHHCCCCHHHHHCCCH-HH-H---HHHHHHHHH
T ss_conf             87-6-987---78999995685781364578768999999--999999976364899964888-99-9---999999999


Q ss_pred             HHHHHH---HCCCCCEEEEEEEEEECCCHH--HHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             998886---312346179875343015625--789999999988---------------788999999999999998776
Q gi|254780958|r  200 NLIQKT---MDYYKSGILINTISIEDASPP--REVADAFDEVQR---------------AEQDEDRFVEESNKYSNRVLG  259 (355)
Q Consensus       200 ~~lq~~---l~~y~~GI~V~~V~i~~v~~P--~~v~~A~~~v~~---------------A~qe~er~i~eAe~~a~~i~~  259 (355)
T Consensus       222 ~~Ld~Y~~GI~I~--~V~lq~a~PP~~V~~AF~DV~~ArqD~er~ineA~aYaN~iiP~ArG~A~rii~eAeaYk~~vV~  299 (419)
T PRK10930        222 ETIRPYDMGITLL--DVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTIL  299 (419)
T ss_pred             HHHHHHCCCCEEE--EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9998508997899--98846789988899999999999988999999999999753513213899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             88999999997778999999
Q gi|254780958|r  260 SARGEASHIRESSIAYKDRI  279 (355)
Q Consensus       260 ~A~geA~~i~~~Aeay~~~~  279 (355)
T Consensus       300 ~A~Gea~RF~~ll~eY~kAP  319 (419)
T PRK10930        300 EAQGEVARFAKLLPEYKAAP  319 (419)
T ss_pred             HHHHHHHHHHHHHHHHHHCH
T ss_conf             64535999999999998686