HHsearch alignment for GI: 254780958 and conserved domain: PRK10930
>PRK10930 FtsH protease regulator HflK; Provisional.
Probab=98.42 E-value=1e-05 Score=57.37 Aligned_cols=243 Identities=13% Similarity=0.126 Sum_probs=125.0
Q ss_pred CCCC---CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----------------CCCCCCCCCHHHHHHHHHHH
Q ss_conf 9888---9999977877777889999988998999999998721----------------16887764379999999999
Q gi|254780958|r 2 SYDK---NNSDWRPTRLSGSNGNGDGLPPFDVEAIIRYIKDKFD----------------LIPFFKSYGSVYIILLLIGS 62 (355)
Q Consensus 2 ~wn~---~~~p~~~~~~~~~~~~~~~~~p~dlde~~~~~~~~~~----------------~~~~~~~~~~i~ii~~v~~~ 62 (355)
T Consensus 15 PWG~~~~~~~~~g-~~~~gg~~qgPPDLDE~~rkl~~kl~~l~gg~g~g~gggg~~~~~~~~~~~~~i~iv~~~lv~~Wl 93 (419)
T PRK10930 15 PWGSSKPGGNSGG-NGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAVVIIWA 93 (419)
T ss_pred CCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9888998888777-778777779999999999999998610137899999999888888877541189999999999999
Q ss_pred HHHHH-------------H--HHCCCHHHHHHHHHHHHHCCCCCCCCCE-ECCCCCCEEEEEEEEEEEEEECCCCCCCCC
Q ss_conf 99997-------------4--2145388999998753311355589836-645753236872204899982672211476
Q gi|254780958|r 63 FCAFQ-------------S--IYIVHPDERAVELRFGKPKNDVFLPGLH-MMFWPIDQVEIVKVIERQQKIGGRSASVGS 126 (355)
Q Consensus 63 ~~~~s-------------g--~~~V~~ge~gVv~rfGk~~~~v~~pGlh-~~~ppi~~v~~v~v~~~~~~~~~~~~~~~~ 126 (355)
T Consensus 94 ~sGfY~V~~~E~gVVlRFGky~~t~~PG-----Lhw----~---p~pIe~V~~VnV~~vR~~~~~~lML--------T~D 153 (419)
T PRK10930 94 ASGFYTIKEAERGVVTRFGKFSHLVEPG-----LNW----K---PTFIDEVKPVNVEAVRELAASGVML--------TSD 153 (419)
T ss_pred HCEEEEECCCCEEEEEECCCCCCCCCCC-----CCC----C---CCCCCEEEEECCEECCCCCCCCCEE--------ECC
T ss_conf 8225997765137878614511020898-----775----3---6775549984452102456566025--------078
Q ss_pred CCEEEEECCCEEEEEEEE------EEEEECCHHHHHHHHCCHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 650366068418876344------34221588785320129899998887-77677775301000001554678877799
Q gi|254780958|r 127 NSGLILTGDQNIVGLHFS------VLYVVTDPRLYLFNLENPGETLKQVS-ESAMREVVGRRFAVDIFRSQRQQIALEVR 199 (355)
Q Consensus 127 ~~~~mLT~D~n~V~v~~~------V~yrI~Dp~~~~~~v~~~~~~l~~~~-esalR~vvg~~~~d~ilt~~R~~i~~~v~ 199 (355)
T Consensus 154 eN-I-VdV---~~~VQYrI~dp~~yLFnv~dPe~tlr~aa--ESAmReVVG~~~~d~vLT~gR-~~-I---a~~v~~~lQ 221 (419)
T PRK10930 154 EN-V-VRV---EMNVQYRVTDPEKYLFSVTSPDDSLRQAT--DSALRGVIGKYTMDRILTEGR-TV-I---RSDTQRELE 221 (419)
T ss_pred CC-E-EEE---EEEEEEEECCHHHHEEECCCHHHHHHHHH--HHHHHHHHCCCCHHHHHCCCH-HH-H---HHHHHHHHH
T ss_conf 87-6-987---78999995685781364578768999999--999999976364899964888-99-9---999999999
Q ss_pred HHHHHH---HCCCCCEEEEEEEEEECCCHH--HHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998886---312346179875343015625--789999999988---------------788999999999999998776
Q gi|254780958|r 200 NLIQKT---MDYYKSGILINTISIEDASPP--REVADAFDEVQR---------------AEQDEDRFVEESNKYSNRVLG 259 (355)
Q Consensus 200 ~~lq~~---l~~y~~GI~V~~V~i~~v~~P--~~v~~A~~~v~~---------------A~qe~er~i~eAe~~a~~i~~ 259 (355)
T Consensus 222 ~~Ld~Y~~GI~I~--~V~lq~a~PP~~V~~AF~DV~~ArqD~er~ineA~aYaN~iiP~ArG~A~rii~eAeaYk~~vV~ 299 (419)
T PRK10930 222 ETIRPYDMGITLL--DVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTIL 299 (419)
T ss_pred HHHHHHCCCCEEE--EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998508997899--98846789988899999999999988999999999999753513213899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999997778999999
Q gi|254780958|r 260 SARGEASHIRESSIAYKDRI 279 (355)
Q Consensus 260 ~A~geA~~i~~~Aeay~~~~ 279 (355)
T Consensus 300 ~A~Gea~RF~~ll~eY~kAP 319 (419)
T PRK10930 300 EAQGEVARFAKLLPEYKAAP 319 (419)
T ss_pred HHHHHHHHHHHHHHHHHHCH
T ss_conf 64535999999999998686