HHsearch alignment for GI: 254780958 and conserved domain: PRK12785
>PRK12785 fliL flagellar basal body-associated protein FliL; Reviewed.
Probab=90.01 E-value=1.4 Score=23.03 Aligned_cols=74 Identities=9% Similarity=0.113 Sum_probs=45.8
Q ss_pred EEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 634434221588785320129899998887776777753010000015-5467887779999888631234617987534
Q gi|254780958|r 141 LHFSVLYVVTDPRLYLFNLENPGETLKQVSESAMREVVGRRFAVDIFR-SQRQQIALEVRNLIQKTMDYYKSGILINTIS 219 (355)
Q Consensus 141 v~~~V~yrI~Dp~~~~~~v~~~~~~l~~~~esalR~vvg~~~~d~ilt-~~R~~i~~~v~~~lq~~l~~y~~GI~V~~V~ 219 (355)
T Consensus 90 Lk~~i~Lev~~~~~~-~~~~~~~P~Ir----D~i~~~L~~~~~~dL~~~~Gk~~Lr~ell~rin~~l~~----~~V~~Vl 160 (167)
T PRK12785 90 LKVKVVLEVKDEKQV-EQIKPLMPRVT----DLFQTYLRELRSSDLNGSAGLFRLKEELTRRVNVALAP----AQVNAVL 160 (167)
T ss_pred EEEEEEEEECCHHHH-HHHHHHHHHHH----HHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCC----CCEEEEE
T ss_conf 999999998888789-99987536799----99999997189989709377999999999999854178----8235998
Q ss_pred EECC
Q ss_conf 3015
Q gi|254780958|r 220 IEDA 223 (355)
Q Consensus 220 i~~v 223 (355)
T Consensus 161 Ftef 164 (167)
T PRK12785 161 FKEV 164 (167)
T ss_pred EEEE
T ss_conf 9863