HHsearch alignment for GI: 254780958 and conserved domain: PRK12785

>PRK12785 fliL flagellar basal body-associated protein FliL; Reviewed.
Probab=90.01  E-value=1.4  Score=23.03  Aligned_cols=74  Identities=9%  Similarity=0.113  Sum_probs=45.8

Q ss_pred             EEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf             634434221588785320129899998887776777753010000015-5467887779999888631234617987534
Q gi|254780958|r  141 LHFSVLYVVTDPRLYLFNLENPGETLKQVSESAMREVVGRRFAVDIFR-SQRQQIALEVRNLIQKTMDYYKSGILINTIS  219 (355)
Q Consensus       141 v~~~V~yrI~Dp~~~~~~v~~~~~~l~~~~esalR~vvg~~~~d~ilt-~~R~~i~~~v~~~lq~~l~~y~~GI~V~~V~  219 (355)
T Consensus        90 Lk~~i~Lev~~~~~~-~~~~~~~P~Ir----D~i~~~L~~~~~~dL~~~~Gk~~Lr~ell~rin~~l~~----~~V~~Vl  160 (167)
T PRK12785         90 LKVKVVLEVKDEKQV-EQIKPLMPRVT----DLFQTYLRELRSSDLNGSAGLFRLKEELTRRVNVALAP----AQVNAVL  160 (167)
T ss_pred             EEEEEEEEECCHHHH-HHHHHHHHHHH----HHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCC----CCEEEEE
T ss_conf             999999998888789-99987536799----99999997189989709377999999999999854178----8235998


Q ss_pred             EECC
Q ss_conf             3015
Q gi|254780958|r  220 IEDA  223 (355)
Q Consensus       220 i~~v  223 (355)
T Consensus       161 Ftef  164 (167)
T PRK12785        161 FKEV  164 (167)
T ss_pred             EEEE
T ss_conf             9863