HHsearch alignment for GI: 254780958 and conserved domain: cd03404

>cd03404 Band_7_HflK Band_7_HflK: The band 7 domain of flotillin (reggie) like proteins. This group includes proteins similar to prokaryotic HlfK (High frequency of lysogenization K). Although many members of the band 7 family are lipid raft associated, prokaryote plasma membranes lack cholesterol and are unlikely to have lipid raft domains. Individual proteins of this band 7 domain family may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Escherichia coli HflK is an integral membrane protein which may localize to the plasma membrane. HflK associates with another band 7 family member (HflC) to form an HflKC complex. HflKC interacts with FtsH in a large complex termed the FtsH holo-enzyme. FtsH is an AAA ATP-dependent protease which exerts progressive proteolysis against membrane-embedded and soluble substrate proteins. HflKC can modulate the activity of FtsH. HflKC plays a role in the decision between lysogenic and lytic cycle growth during la
Probab=100.00  E-value=0  Score=446.10  Aligned_cols=262  Identities=45%  Similarity=0.702  Sum_probs=240.3

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEE-EEEEEEEEEEEECC---CCCCCCCCCEE
Q ss_conf             999999999999742145388999998753311355589836645753236-87220489998267---22114766503
Q gi|254780958|r   55 IILLLIGSFCAFQSIYIVHPDERAVELRFGKPKNDVFLPGLHMMFWPIDQV-EIVKVIERQQKIGG---RSASVGSNSGL  130 (355)
Q Consensus        55 ii~~v~~~~~~~sg~~~V~~ge~gVv~rfGk~~~~v~~pGlh~~~ppi~~v-~~v~v~~~~~~~~~---~~~~~~~~~~~  130 (355)
T Consensus         1 ii~~~~~~~~~~ss~~~V~~~e~~Vv~rfGk~~~-~~~pGlhf~iP~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T cd03404           1 LIAALLVILWLLSGFYIVQPGERGVVLRFGKYSR-TVEPGLHWKLPYPIEVVEVVPVFQLRSVGIPVRVGSVRSVPGESL   79 (266)
T ss_pred             CCHHHHHHHHHHHEEEEECCCEEEEEEECCCCCC-CCCCCEEEEECCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCE
T ss_conf             9268999999996689988984899887698667-348976899477079999987789995157633444456652121


Q ss_pred             EEECCCEEEEEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             66068418876344342215887853201298999988877767777530100000155467887779999888631234
Q gi|254780958|r  131 ILTGDQNIVGLHFSVLYVVTDPRLYLFNLENPGETLKQVSESAMREVVGRRFAVDIFRSQRQQIALEVRNLIQKTMDYYK  210 (355)
Q Consensus       131 mLT~D~n~V~v~~~V~yrI~Dp~~~~~~v~~~~~~l~~~~esalR~vvg~~~~d~ilt~~R~~i~~~v~~~lq~~l~~y~  210 (355)
T Consensus        80 ~lT~D~~~v~vd~~v~yrI~dp~~~~~~~~~~~~~l~~~~~~~lR~~ig~~~lde~l~~~R~~i~~~i~~~l~~~~~~~~  159 (266)
T cd03404          80 MLTGDENIVDVEFAVQYRISDPYDYLFNVRDPEGTLRQAAESAMREVVGRSTLDDVLTEGREEIAQDVRELLQAILDAYK  159 (266)
T ss_pred             EECCCCCEEEEEEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             56168988999999999988689988862589999999999999999726606888643799999999999999873456


Q ss_pred             CEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             61798753430156257899999999887889999999999999987768899999999777899999999723229999
Q gi|254780958|r  211 SGILINTISIEDASPPREVADAFDEVQRAEQDEDRFVEESNKYSNRVLGSARGEASHIRESSIAYKDRIIQEAQGEADRF  290 (355)
Q Consensus       211 ~GI~V~~V~i~~v~~P~~v~~A~~~v~~A~qe~er~i~eAe~~a~~i~~~A~geA~~i~~~Aeay~~~~i~~A~gea~rf  290 (355)
T Consensus       160 ~GI~v~~V~i~~i~~P~~v~~a~~~~~~A~~e~~~~~~~ae~~a~~~~~~A~~ea~~~~~~Aea~~~~~~~~aegeA~~~  239 (266)
T cd03404         160 AGIEIVGVNLQDADPPEEVQDAFDDVNKARQDRERLINEAEAYANEVVPKARGEAARIIQEAEAYKEEVIAEAQGEAARF  239 (266)
T ss_pred             CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             86799999975269989999999999999999999999999999999999888999999999999999998724369999


Q ss_pred             HHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf             999999986999999999999999983
Q gi|254780958|r  291 LSIYGQYVNAPTLLRKRIYLETMEGIL  317 (355)
Q Consensus       291 ~~i~~~Y~~ap~vt~~rlylet~~~vl  317 (355)
T Consensus       240 ~~~~~ay~k~P~~~~~~~~l~~~~~~l  266 (266)
T cd03404         240 ESLLAEYKKAPDVTRERLYLETMEEVL  266 (266)
T ss_pred             HHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_conf             999999986979999999999999859