HHsearch results for GI: 254780958 and protein with PDBid: 1win_A
>1win_A Flotillin 2; BAND 7 domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, cell adhesion; NMR {Mus musculus} SCOP: d.43.2.1
Probab=99.69 E-value=8.4e-18 Score=136.30 Aligned_cols=124 Identities=15% Similarity=0.175 Sum_probs=107.1
Q ss_pred EEEEEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEEECCHHHHHH---------HHCCHHHHHHHHHHHHH
Q ss_conf 368722048999826722114766503660684188763443422158878532---------01298999988877767
Q gi|254780958|r 104 QVEIVKVIERQQKIGGRSASVGSNSGLILTGDQNIVGLHFSVLYVVTDPRLYLF---------NLENPGETLKQVSESAM 174 (355)
Q Consensus 104 ~v~~v~v~~~~~~~~~~~~~~~~~~~~mLT~D~n~V~v~~~V~yrI~Dp~~~~~---------~v~~~~~~l~~~~esal 174 (355)
++.+++.+.+.+++..+. .+|+|+..|+|+++++|||.||.++++ .+.+++..|+..++++|
T Consensus 6 ~~~rvsl~~~~l~~~~q~---------v~T~D~v~i~V~a~v~~rI~d~~~~v~~a~~~~~~~~~~~~~~~i~~~~~~~l 76 (143)
T 1win_A 6 SGQRISLEIMTLQPRCED---------VETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGKNVQDIKNVVLQTLEGHL 76 (143)
T ss_dssp CCCSCCCSCEEECCCEEE---------EECSSSCEEEECCEEEEEECCCSSCCHHHHHHHSSSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEECCCCEE---------EECCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 317875167885388707---------78588977974369999994959999999998624778899999999999999
Q ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 77753010000015546788777999988863123461798753430156257899999999887
Q gi|254780958|r 175 REVVGRRFAVDIFRSQRQQIALEVRNLIQKTMDYYKSGILINTISIEDASPPREVADAFDEVQRA 239 (355)
Q Consensus 175 R~vvg~~~~d~ilt~~R~~i~~~v~~~lq~~l~~y~~GI~V~~V~i~~v~~P~~v~~A~~~v~~A 239 (355)
|+++|+++++++++ +|++|+.++++.+++.++.| ||+|++|+|+++++|+++.+|+.....|
T Consensus 77 R~vi~~~~~~el~~-~R~~i~~~v~~~i~~~l~~~--Gi~V~~v~I~dI~~~~~~~~a~~~~~~A 138 (143)
T 1win_A 77 RSILGTLTVEQIYQ-DRDQFAKLVREVAAPDVGRM--GIEILSFTIKDVYDKVDYLSSLGKTQTS 138 (143)
T ss_dssp HHHHHHSCHHHHHH-THHHHHHHHHHHHHHHHTTT--TEEEEEEECCCEECTTCHHHHHCCCCCC
T ss_pred HHHHHHCCHHHHHH-CHHHHHHHHHHHHHHHHHHC--CEEEEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 99998637888860-89999999999999998765--9499999999607828999999999986