HHsearch results for GI: 254780958 and protein with PDBid: 1win_A

>1win_A Flotillin 2; BAND 7 domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, cell adhesion; NMR {Mus musculus} SCOP: d.43.2.1
Probab=99.69  E-value=8.4e-18  Score=136.30  Aligned_cols=124  Identities=15%  Similarity=0.175  Sum_probs=107.1

Q ss_pred             EEEEEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEEECCHHHHHH---------HHCCHHHHHHHHHHHHH
Q ss_conf             368722048999826722114766503660684188763443422158878532---------01298999988877767
Q gi|254780958|r  104 QVEIVKVIERQQKIGGRSASVGSNSGLILTGDQNIVGLHFSVLYVVTDPRLYLF---------NLENPGETLKQVSESAM  174 (355)
Q Consensus       104 ~v~~v~v~~~~~~~~~~~~~~~~~~~~mLT~D~n~V~v~~~V~yrI~Dp~~~~~---------~v~~~~~~l~~~~esal  174 (355)
                      ++.+++.+.+.+++..+.         .+|+|+..|+|+++++|||.||.++++         .+.+++..|+..++++|
T Consensus         6 ~~~rvsl~~~~l~~~~q~---------v~T~D~v~i~V~a~v~~rI~d~~~~v~~a~~~~~~~~~~~~~~~i~~~~~~~l   76 (143)
T 1win_A            6 SGQRISLEIMTLQPRCED---------VETAEGVALTVTGVAQVKIMTEKELLAVACEQFLGKNVQDIKNVVLQTLEGHL   76 (143)
T ss_dssp             CCCSCCCSCEEECCCEEE---------EECSSSCEEEECCEEEEEECCCSSCCHHHHHHHSSSCHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEEEEECCCCEE---------EECCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             317875167885388707---------78588977974369999994959999999998624778899999999999999


Q ss_pred             HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             77753010000015546788777999988863123461798753430156257899999999887
Q gi|254780958|r  175 REVVGRRFAVDIFRSQRQQIALEVRNLIQKTMDYYKSGILINTISIEDASPPREVADAFDEVQRA  239 (355)
Q Consensus       175 R~vvg~~~~d~ilt~~R~~i~~~v~~~lq~~l~~y~~GI~V~~V~i~~v~~P~~v~~A~~~v~~A  239 (355)
                      |+++|+++++++++ +|++|+.++++.+++.++.|  ||+|++|+|+++++|+++.+|+.....|
T Consensus        77 R~vi~~~~~~el~~-~R~~i~~~v~~~i~~~l~~~--Gi~V~~v~I~dI~~~~~~~~a~~~~~~A  138 (143)
T 1win_A           77 RSILGTLTVEQIYQ-DRDQFAKLVREVAAPDVGRM--GIEILSFTIKDVYDKVDYLSSLGKTQTS  138 (143)
T ss_dssp             HHHHHHSCHHHHHH-THHHHHHHHHHHHHHHHTTT--TEEEEEEECCCEECTTCHHHHHCCCCCC
T ss_pred             HHHHHHCCHHHHHH-CHHHHHHHHHHHHHHHHHHC--CEEEEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf             99998637888860-89999999999999998765--9499999999607828999999999986