HHsearch results for GI: 254780958 and protein with PDBid: 2rpb_A
>2rpb_A Hypothetical membrane protein; SPFH domain; NMR {Pyrococcus horikoshii}
Probab=99.79 E-value=1.4e-19 Score=148.19 Aligned_cols=111 Identities=20% Similarity=0.390 Sum_probs=101.9
Q ss_pred EEEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 87220489998267221147665036606841887634434221588785320129899998887776777753010000
Q gi|254780958|r 106 EIVKVIERQQKIGGRSASVGSNSGLILTGDQNIVGLHFSVLYVVTDPRLYLFNLENPGETLKQVSESAMREVVGRRFAVD 185 (355)
Q Consensus 106 ~~v~v~~~~~~~~~~~~~~~~~~~~mLT~D~n~V~v~~~V~yrI~Dp~~~~~~v~~~~~~l~~~~esalR~vvg~~~~d~ 185 (355)
.+||.+.+.++++.+. |+|+|++.|.|+++++|||+||.+|+|++.|+..++..++++++|+++|++++++
T Consensus 3 ~kVD~R~~~~d~~~q~---------vlT~D~~~v~vd~~v~yrI~Dp~~~~~~v~~~~~al~~~~~~~lr~~i~~~~l~~ 73 (113)
T 2rpb_A 3 DHVDLREHVIDVPPQE---------VICKDNVVVTVDAVVYYQVIDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDE 73 (113)
T ss_dssp SCCCCCCEEEECCCEE---------EECTTSCEEEECEEEEEEESCTTTCTTTTTHHHHHHHHHHHHHHHHHHTSCCTTH
T ss_pred CCEEEEEEEECCCCCE---------EECCCCCEEEEEEEEEEEECCHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 7177478844389856---------4858998999999999998533774334699999999999999999853166999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHH
Q ss_conf 0155467887779999888631234617987534301562578
Q gi|254780958|r 186 IFRSQRQQIALEVRNLIQKTMDYYKSGILINTISIEDASPPRE 228 (355)
Q Consensus 186 ilt~~R~~i~~~v~~~lq~~l~~y~~GI~V~~V~i~~v~~P~~ 228 (355)
+++ +|.+++.++++.+++.++.| ||+|++|+|++++||++
T Consensus 74 l~~-~r~~i~~~i~~~~~~~~~~~--GI~V~~V~ikdi~lP~e 113 (113)
T 2rpb_A 74 TLS-GRDIINARLREELDKITDRW--GVKITRVEIQRIDPPKD 113 (113)
T ss_dssp HHH-CHHHHHHHHHHHHHHHHGGG--TEECCCEEECCCBCCCC
T ss_pred HHC-CHHHHHHHHHHHHHHHHHHC--CEEEEEEEEEEEECCCC
T ss_conf 860-79999999999999999971--97999999984108589