RPSBLAST alignment for GI: 254780958 and conserved domain: TIGR01932
>gnl|CDD|162612 TIGR01932, hflC, HflC protein. HflK and HflC are paralogs encoded by tandem genes in Proteobacteria, spirochetes, and some other bacterial lineages. The HflKC complex is anchored in the membrane and exposed to the periplasm. The complex is not active as a protease, but rather binds to and appears to modulate the ATP-dependent protease FtsH. The overall function of HflKC is not fully described.//Regulation of FtsH protease appears to be negative (PubMed:8947034, PubMed:96367). Length = 317
Score = 47.9 bits (114), Expect = 5e-06
Identities = 67/314 (21%), Positives = 108/314 (34%), Gaps = 59/314 (18%)
Query: 55 IILLLIGSFCAFQSIYIVHPDERAVELRFGKPKND------VFLPGLHMMFWPIDQVEIV 108
+I+LLI FQ +I+ ER + RFGK D V+ PGLH I+ V+I
Sbjct: 8 VIVLLIVVL--FQPFFIIKEGERGIITRFGKILKDNNHHVLVYEPGLHFKIPFIEHVKIF 65
Query: 109 KVIERQQKIGGRSASVGSNSGLILTGDQNIVGLHFSVLYVVTD-PRLYL----FNLENPG 163
+ Q + GR I T ++ + + + + + D + YL +
Sbjct: 66 D--AKIQTMDGRPDR-------IPTKEKKDIIIDTYIRWRIEDFKKYYLSTGGGTISAAE 116
Query: 164 ETLKQVSESAMREVVGRRFAVDIFRSQRQQI-------ALEVRNLIQKTMDYYKSGILIN 216
+K+ + +R +G +I RS Q+ AL I K G I
Sbjct: 117 VLIKRKIDDRLRSEIGVLGLKEIVRSSNDQLDTLVSKLALNRGGKINKIAMTITKGREIL 176
Query: 217 TISIEDASPPR------EVADAF-------DEVQRAEQDEDRFVEESNKYSNRVLGSARG 263
I + + EV D DE+ E +R E + +
Sbjct: 177 AREISQIANSQLKDIGIEVVDVRIKKINYSDELS--ESIYNRMRSEREQIARMHRSQGEE 234
Query: 264 EASHIRESSIAYKDRIIQEAQ-------GEADR-----FLSIYGQYVNAPTLLRKRIYLE 311
+A I + +I+ EA GE D + YG+ + R LE
Sbjct: 235 KAEEILGKAEYEVRKILSEAYRTARIIKGEGDAEAAKIYSDAYGKDPEFYSFWRS---LE 291
Query: 312 TMEGILKKAKKVII 325
E K + +
Sbjct: 292 AYEKSFKDNQDEKV 305