RPSBLAST alignment for GI: 254780958 and conserved domain: cd03405
>gnl|CDD|48217 cd03405, Band_7_HflC, Band_7_HflC: The band 7 domain of flotillin (reggie) like proteins. This group includes proteins similar to prokaryotic HlfC (High frequency of lysogenization C). Although many members of the band 7 family are lipid raft associated, prokaryote plasma membranes lack cholesterol and are unlikely to have lipid raft domains. Individual proteins of this band 7 domain family may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Escherichia coli HflC is an integral membrane protein which may localize to the plasma membrane. HflC associates with another band 7 family member (HflK) to form an HflKC complex. HflKC interacts with FtsH in a large complex termed the FtsH holo-enzyme. FtsH is an AAA ATP-dependent protease which exerts progressive proteolysis against membrane-embedded and soluble substrate proteins. HflKC can modulate the activity of FtsH. HflKC plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection.. Length = 242
Score = 78.6 bits (194), Expect = 2e-15
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 20/234 (8%)
Query: 69 IYIVHPDERAVELRFGKPKNDVFLPGLHMMFWPIDQVEIVKVIERQQKIGGRSASVGSNS 128
++IV E+AV LRFG+ V PGLH I QV+ +R + V
Sbjct: 1 LFIVDEGEQAVVLRFGEVVRVVTEPGLHFKLPFIQQVKKFD--KRILTLDSDPQRV---- 54
Query: 129 GLILTGDQNIVGLHFSVLYVVTDPRLYLFNLEN----PGETLKQVSESAMREVVGRRFAV 184
LT D+ + + + +TDP + + L Q+ SA+R G+R +
Sbjct: 55 ---LTKDKKRLIVDAYAKWRITDPLRFYQAVGGEERAAETRLDQIVNSALRAEFGKRTLI 111
Query: 185 DIFRSQRQQIALEVRNLIQKTMDYYKSGILINTISIEDASPPREVADAFDEVQRAE--QD 242
++ +R ++ E+R + + GI + + I+ P EV+++ RAE +
Sbjct: 112 ELVSGERGELMEEIRRAVAEEAKEL--GIEVVDVRIKRIDLPEEVSESVYRRMRAERERI 169
Query: 243 EDRFVEESNKYSNRVLGSARGEASHIRESSIAYKDRIIQEAQGEADRFLSIYGQ 296
F E + + R+ A E + I + AY++ +G+A+ IY +
Sbjct: 170 AAEFRAEGEEEAERIRADADRERTVIL--AEAYREAQEIRGEGDAEA-ARIYAE 220